CpPa04_RS03310 9268dfa80046086c327bb9179392783a 276 PIRSF PIRSF015582 2 276 4.0E-54 T 10-03-2017 IPR011206 Citrate lyase beta subunit-like CpPa04_RS03310 9268dfa80046086c327bb9179392783a 276 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 109 218 2.6E-8 T 10-03-2017 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CpPa04_RS03310 9268dfa80046086c327bb9179392783a 276 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 13 98 6.7E-9 T 10-03-2017 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CpPa04_RS03310 9268dfa80046086c327bb9179392783a 276 SUPERFAMILY SSF51621 12 230 1.43E-48 T 10-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CpPa04_RS03310 9268dfa80046086c327bb9179392783a 276 Gene3D G3DSA:3.20.20.60 12 230 4.4E-51 T 10-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CpPa04_RS01665 8c7bbdb449e162aace4d456159185ea2 420 SUPERFAMILY SSF55874 299 419 7.18E-7 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS01665 8c7bbdb449e162aace4d456159185ea2 420 Pfam PF07730 Histidine kinase 212 277 2.2E-17 T 10-03-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CpPa04_RS01730 126b47fc4d9e52d0d0ad8fafe5e0247d 396 Gene3D G3DSA:2.40.30.10 211 299 1.0E-35 T 10-03-2017 CpPa04_RS01730 126b47fc4d9e52d0d0ad8fafe5e0247d 396 Pfam PF03144 Elongation factor Tu domain 2 226 295 7.9E-17 T 10-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CpPa04_RS01730 126b47fc4d9e52d0d0ad8fafe5e0247d 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 57.714 T 10-03-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CpPa04_RS01730 126b47fc4d9e52d0d0ad8fafe5e0247d 396 Gene3D G3DSA:3.40.50.300 4 210 4.9E-69 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01730 126b47fc4d9e52d0d0ad8fafe5e0247d 396 Gene3D G3DSA:2.40.30.10 302 395 2.7E-45 T 10-03-2017 CpPa04_RS01730 126b47fc4d9e52d0d0ad8fafe5e0247d 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 202 1.7E-56 T 10-03-2017 CpPa04_RS01730 126b47fc4d9e52d0d0ad8fafe5e0247d 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.6E-24 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS01730 126b47fc4d9e52d0d0ad8fafe5e0247d 396 PRINTS PR00315 GTP-binding elongation factor signature 96 107 2.6E-24 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS01730 126b47fc4d9e52d0d0ad8fafe5e0247d 396 PRINTS PR00315 GTP-binding elongation factor signature 80 90 2.6E-24 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS01730 126b47fc4d9e52d0d0ad8fafe5e0247d 396 PRINTS PR00315 GTP-binding elongation factor signature 60 68 2.6E-24 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS01730 126b47fc4d9e52d0d0ad8fafe5e0247d 396 PRINTS PR00315 GTP-binding elongation factor signature 133 142 2.6E-24 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS01730 126b47fc4d9e52d0d0ad8fafe5e0247d 396 SUPERFAMILY SSF50447 206 303 3.33E-29 T 10-03-2017 IPR009000 Translation protein, beta-barrel domain CpPa04_RS01730 126b47fc4d9e52d0d0ad8fafe5e0247d 396 SUPERFAMILY SSF52540 9 227 4.5E-59 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01730 126b47fc4d9e52d0d0ad8fafe5e0247d 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 53 68 - T 10-03-2017 IPR031157 Tr-type G domain, conserved site CpPa04_RS01730 126b47fc4d9e52d0d0ad8fafe5e0247d 396 SUPERFAMILY SSF50465 304 396 1.18E-34 T 10-03-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CpPa04_RS01730 126b47fc4d9e52d0d0ad8fafe5e0247d 396 Pfam PF03143 Elongation factor Tu C-terminal domain 302 394 4.3E-31 T 10-03-2017 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CpPa04_RS01730 126b47fc4d9e52d0d0ad8fafe5e0247d 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 396 1.6E-212 T 10-03-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CpPa04_RS01730 126b47fc4d9e52d0d0ad8fafe5e0247d 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 3.4E-13 T 10-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CpPa04_RS01875 c9d54ea3de62092f18a131ab7bc0b67b 358 SMART SM00870 54 357 5.9E-93 T 10-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 CpPa04_RS01875 c9d54ea3de62092f18a131ab7bc0b67b 358 SUPERFAMILY SSF53774 54 356 2.22E-74 T 10-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 CpPa04_RS01875 c9d54ea3de62092f18a131ab7bc0b67b 358 PIRSF PIRSF001220 51 357 6.4E-76 T 10-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 CpPa04_RS01875 c9d54ea3de62092f18a131ab7bc0b67b 358 Gene3D G3DSA:3.40.50.40 245 356 7.2E-26 T 10-03-2017 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 CpPa04_RS01875 c9d54ea3de62092f18a131ab7bc0b67b 358 PIRSF PIRSF500176 52 357 1.2E-74 T 10-03-2017 CpPa04_RS01875 c9d54ea3de62092f18a131ab7bc0b67b 358 PRINTS PR00139 Asparaginase/glutaminase family signature 55 66 8.1E-17 T 10-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 CpPa04_RS01875 c9d54ea3de62092f18a131ab7bc0b67b 358 PRINTS PR00139 Asparaginase/glutaminase family signature 292 310 8.1E-17 T 10-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 CpPa04_RS01875 c9d54ea3de62092f18a131ab7bc0b67b 358 PRINTS PR00139 Asparaginase/glutaminase family signature 132 150 8.1E-17 T 10-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 CpPa04_RS01875 c9d54ea3de62092f18a131ab7bc0b67b 358 Gene3D G3DSA:3.40.50.1170 54 230 3.3E-48 T 10-03-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CpPa04_RS01875 c9d54ea3de62092f18a131ab7bc0b67b 358 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 57 65 - T 10-03-2017 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 CpPa04_RS01875 c9d54ea3de62092f18a131ab7bc0b67b 358 Pfam PF00710 Asparaginase, N-terminal 55 232 9.4E-47 T 10-03-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CpPa04_RS04485 b65deabd71ef2ef23ca2d66e7de0d3fc 296 SUPERFAMILY SSF46785 1 107 3.06E-16 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS04485 b65deabd71ef2ef23ca2d66e7de0d3fc 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 1.5E-13 T 10-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CpPa04_RS04485 b65deabd71ef2ef23ca2d66e7de0d3fc 296 Pfam PF03466 LysR substrate binding domain 90 278 2.0E-11 T 10-03-2017 IPR005119 LysR, substrate-binding CpPa04_RS04485 b65deabd71ef2ef23ca2d66e7de0d3fc 296 SUPERFAMILY SSF53850 89 281 3.08E-16 T 10-03-2017 CpPa04_RS04485 b65deabd71ef2ef23ca2d66e7de0d3fc 296 Gene3D G3DSA:3.40.190.10 88 192 2.4E-29 T 10-03-2017 CpPa04_RS04485 b65deabd71ef2ef23ca2d66e7de0d3fc 296 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 3 288 8.8E-90 T 10-03-2017 IPR017685 HTH-type transcriptional regulator ArgP CpPa04_RS04485 b65deabd71ef2ef23ca2d66e7de0d3fc 296 Gene3D G3DSA:1.10.10.10 2 82 1.3E-17 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS09415 d7c55d7e1e2cfe104f506f16529ddfaa 428 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 10-03-2017 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CpPa04_RS09415 d7c55d7e1e2cfe104f506f16529ddfaa 428 Pfam PF00709 Adenylosuccinate synthetase 4 421 1.1E-171 T 10-03-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CpPa04_RS09415 d7c55d7e1e2cfe104f506f16529ddfaa 428 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 10-03-2017 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CpPa04_RS09415 d7c55d7e1e2cfe104f506f16529ddfaa 428 SMART SM00788 3 422 4.5E-278 T 10-03-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CpPa04_RS09415 d7c55d7e1e2cfe104f506f16529ddfaa 428 SUPERFAMILY SSF52540 1 426 4.89E-169 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09415 d7c55d7e1e2cfe104f506f16529ddfaa 428 Gene3D G3DSA:3.40.440.10 195 263 4.4E-67 T 10-03-2017 CpPa04_RS09415 d7c55d7e1e2cfe104f506f16529ddfaa 428 Gene3D G3DSA:3.40.440.10 1 93 4.4E-67 T 10-03-2017 CpPa04_RS09415 d7c55d7e1e2cfe104f506f16529ddfaa 428 Gene3D G3DSA:3.90.170.10 265 422 4.9E-68 T 10-03-2017 CpPa04_RS09415 d7c55d7e1e2cfe104f506f16529ddfaa 428 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 428 195.985 T 10-03-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CpPa04_RS09415 d7c55d7e1e2cfe104f506f16529ddfaa 428 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 427 3.2E-161 T 10-03-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CpPa04_RS09415 d7c55d7e1e2cfe104f506f16529ddfaa 428 Gene3D G3DSA:1.10.300.10 101 194 2.4E-34 T 10-03-2017 CpPa04_RS08755 80f8952dac7f65cc02ebc82ee97407a0 305 Gene3D G3DSA:3.20.10.10 145 290 1.0E-31 T 10-03-2017 CpPa04_RS08755 80f8952dac7f65cc02ebc82ee97407a0 305 Pfam PF01063 Amino-transferase class IV 56 282 7.9E-41 T 10-03-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CpPa04_RS08755 80f8952dac7f65cc02ebc82ee97407a0 305 Gene3D G3DSA:3.30.470.10 43 131 3.6E-16 T 10-03-2017 CpPa04_RS08755 80f8952dac7f65cc02ebc82ee97407a0 305 SUPERFAMILY SSF56752 42 299 1.44E-50 T 10-03-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CpPa04_RS10390 1b7b0f67c9e6506e8e16e24a7b12a09f 273 SUPERFAMILY SSF46946 126 209 1.91E-22 T 10-03-2017 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CpPa04_RS10390 1b7b0f67c9e6506e8e16e24a7b12a09f 273 SUPERFAMILY SSF81624 6 128 2.88E-16 T 10-03-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CpPa04_RS10390 1b7b0f67c9e6506e8e16e24a7b12a09f 273 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 127 210 4.8E-18 T 10-03-2017 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CpPa04_RS10390 1b7b0f67c9e6506e8e16e24a7b12a09f 273 Gene3D G3DSA:3.20.190.10 6 127 6.5E-12 T 10-03-2017 CpPa04_RS10390 1b7b0f67c9e6506e8e16e24a7b12a09f 273 Gene3D G3DSA:1.10.8.50 128 271 2.4E-42 T 10-03-2017 CpPa04_RS10390 1b7b0f67c9e6506e8e16e24a7b12a09f 273 SMART SM01232 127 217 9.8E-28 T 10-03-2017 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CpPa04_RS10390 1b7b0f67c9e6506e8e16e24a7b12a09f 273 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 5 98 5.5E-6 T 10-03-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CpPa04_RS10390 1b7b0f67c9e6506e8e16e24a7b12a09f 273 ProSitePatterns PS01242 Zinc finger FPG-type signature. 246 270 - T 10-03-2017 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 CpPa04_RS10390 1b7b0f67c9e6506e8e16e24a7b12a09f 273 SMART SM00898 6 113 1.9E-11 T 10-03-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CpPa04_RS10390 1b7b0f67c9e6506e8e16e24a7b12a09f 273 SUPERFAMILY SSF57716 225 271 4.55E-14 T 10-03-2017 CpPa04_RS10390 1b7b0f67c9e6506e8e16e24a7b12a09f 273 Pfam PF06827 Zinc finger found in FPG and IleRS 243 272 2.0E-7 T 10-03-2017 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CpPa04_RS08025 9f12cd8f374a44ab59870dc526294b93 508 Hamap MF_01454 GTPase Obg [obg]. 3 341 44.321 T 10-03-2017 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CpPa04_RS08025 9f12cd8f374a44ab59870dc526294b93 508 Pfam PF09269 Domain of unknown function (DUF1967) 372 442 1.5E-25 T 10-03-2017 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 CpPa04_RS08025 9f12cd8f374a44ab59870dc526294b93 508 Pfam PF01926 50S ribosome-binding GTPase 161 293 4.7E-23 T 10-03-2017 IPR006073 GTP binding domain GO:0005525 CpPa04_RS08025 9f12cd8f374a44ab59870dc526294b93 508 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 4 340 1.3E-126 T 10-03-2017 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CpPa04_RS08025 9f12cd8f374a44ab59870dc526294b93 508 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 380 443 2.1E-25 T 10-03-2017 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 CpPa04_RS08025 9f12cd8f374a44ab59870dc526294b93 508 Gene3D G3DSA:3.40.50.300 160 351 1.4E-50 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08025 9f12cd8f374a44ab59870dc526294b93 508 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 4.1E-34 T 10-03-2017 IPR006073 GTP binding domain GO:0005525 CpPa04_RS08025 9f12cd8f374a44ab59870dc526294b93 508 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 4.1E-34 T 10-03-2017 IPR006073 GTP binding domain GO:0005525 CpPa04_RS08025 9f12cd8f374a44ab59870dc526294b93 508 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 4.1E-34 T 10-03-2017 IPR006073 GTP binding domain GO:0005525 CpPa04_RS08025 9f12cd8f374a44ab59870dc526294b93 508 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 4.1E-34 T 10-03-2017 IPR006073 GTP binding domain GO:0005525 CpPa04_RS08025 9f12cd8f374a44ab59870dc526294b93 508 Gene3D G3DSA:2.70.210.12 3 156 2.3E-50 T 10-03-2017 IPR006169 GTP1/OBG domain GO:0005525 CpPa04_RS08025 9f12cd8f374a44ab59870dc526294b93 508 Pfam PF01018 GTP1/OBG 4 157 4.3E-53 T 10-03-2017 IPR006169 GTP1/OBG domain GO:0005525 CpPa04_RS08025 9f12cd8f374a44ab59870dc526294b93 508 SUPERFAMILY SSF102741 370 444 1.83E-21 T 10-03-2017 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 CpPa04_RS08025 9f12cd8f374a44ab59870dc526294b93 508 SUPERFAMILY SSF82051 4 157 9.16E-48 T 10-03-2017 IPR006169 GTP1/OBG domain GO:0005525 CpPa04_RS08025 9f12cd8f374a44ab59870dc526294b93 508 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 10-03-2017 IPR006074 GTP1/OBG, conserved site GO:0005525 CpPa04_RS08025 9f12cd8f374a44ab59870dc526294b93 508 SUPERFAMILY SSF52540 152 349 4.38E-50 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01425 4c890bec5a5fb350bf58d9d29b6782a9 461 Gene3D G3DSA:3.40.50.720 2 43 5.0E-11 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS01425 4c890bec5a5fb350bf58d9d29b6782a9 461 SUPERFAMILY SSF54373 302 410 6.8E-23 T 10-03-2017 CpPa04_RS01425 4c890bec5a5fb350bf58d9d29b6782a9 461 Pfam PF01593 Flavin containing amine oxidoreductase 10 459 6.1E-36 T 10-03-2017 IPR002937 Amine oxidase GO:0016491|GO:0055114 CpPa04_RS01425 4c890bec5a5fb350bf58d9d29b6782a9 461 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 3 459 2.1E-52 T 10-03-2017 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CpPa04_RS01425 4c890bec5a5fb350bf58d9d29b6782a9 461 Gene3D G3DSA:1.10.3110.10 115 188 1.9E-10 T 10-03-2017 CpPa04_RS01425 4c890bec5a5fb350bf58d9d29b6782a9 461 SUPERFAMILY SSF51905 428 458 2.54E-38 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS01425 4c890bec5a5fb350bf58d9d29b6782a9 461 SUPERFAMILY SSF51905 2 317 2.54E-38 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS01425 4c890bec5a5fb350bf58d9d29b6782a9 461 Gene3D G3DSA:3.90.660.20 237 405 2.8E-23 T 10-03-2017 IPR027418 Protoporphyrinogen oxidase, C-terminal domain KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CpPa04_RS01705 2fe626e8147e0c8bb18aa741e506faa8 598 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 30 593 5.2E-183 T 10-03-2017 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 CpPa04_RS01705 2fe626e8147e0c8bb18aa741e506faa8 598 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 29 591 4.8E-148 T 10-03-2017 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 CpPa04_RS01705 2fe626e8147e0c8bb18aa741e506faa8 598 SUPERFAMILY SSF51998 30 577 1.25E-155 T 10-03-2017 CpPa04_RS01705 2fe626e8147e0c8bb18aa741e506faa8 598 Gene3D G3DSA:3.20.70.20 35 576 1.7E-192 T 10-03-2017 CpPa04_RS06855 3a868c216ac25eb7aaf8d7a3e00305ae 472 SUPERFAMILY SSF50800 71 165 1.62E-25 T 10-03-2017 IPR011037 Pyruvate kinase-like, insert domain CpPa04_RS06855 3a868c216ac25eb7aaf8d7a3e00305ae 472 Pfam PF00224 Pyruvate kinase, barrel domain 3 335 1.1E-114 T 10-03-2017 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CpPa04_RS06855 3a868c216ac25eb7aaf8d7a3e00305ae 472 Gene3D G3DSA:3.40.1380.20 340 463 4.4E-34 T 10-03-2017 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CpPa04_RS06855 3a868c216ac25eb7aaf8d7a3e00305ae 472 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 464 2.6E-162 T 10-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CpPa04_RS06855 3a868c216ac25eb7aaf8d7a3e00305ae 472 SUPERFAMILY SSF51621 155 335 3.21E-91 T 10-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CpPa04_RS06855 3a868c216ac25eb7aaf8d7a3e00305ae 472 SUPERFAMILY SSF51621 2 75 3.21E-91 T 10-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CpPa04_RS06855 3a868c216ac25eb7aaf8d7a3e00305ae 472 PRINTS PR01050 Pyruvate kinase family signature 311 327 1.8E-60 T 10-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CpPa04_RS06855 3a868c216ac25eb7aaf8d7a3e00305ae 472 PRINTS PR01050 Pyruvate kinase family signature 185 199 1.8E-60 T 10-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CpPa04_RS06855 3a868c216ac25eb7aaf8d7a3e00305ae 472 PRINTS PR01050 Pyruvate kinase family signature 242 266 1.8E-60 T 10-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CpPa04_RS06855 3a868c216ac25eb7aaf8d7a3e00305ae 472 PRINTS PR01050 Pyruvate kinase family signature 60 76 1.8E-60 T 10-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CpPa04_RS06855 3a868c216ac25eb7aaf8d7a3e00305ae 472 PRINTS PR01050 Pyruvate kinase family signature 215 241 1.8E-60 T 10-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CpPa04_RS06855 3a868c216ac25eb7aaf8d7a3e00305ae 472 PRINTS PR01050 Pyruvate kinase family signature 267 291 1.8E-60 T 10-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CpPa04_RS06855 3a868c216ac25eb7aaf8d7a3e00305ae 472 PRINTS PR01050 Pyruvate kinase family signature 292 310 1.8E-60 T 10-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CpPa04_RS06855 3a868c216ac25eb7aaf8d7a3e00305ae 472 Gene3D G3DSA:2.40.33.10 74 167 4.2E-28 T 10-03-2017 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CpPa04_RS06855 3a868c216ac25eb7aaf8d7a3e00305ae 472 ProSitePatterns PS00110 Pyruvate kinase active site signature. 213 225 - T 10-03-2017 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CpPa04_RS06855 3a868c216ac25eb7aaf8d7a3e00305ae 472 SUPERFAMILY SSF52935 322 466 5.49E-35 T 10-03-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CpPa04_RS06855 3a868c216ac25eb7aaf8d7a3e00305ae 472 Gene3D G3DSA:3.20.20.60 3 73 2.2E-98 T 10-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CpPa04_RS06855 3a868c216ac25eb7aaf8d7a3e00305ae 472 Gene3D G3DSA:3.20.20.60 168 331 2.2E-98 T 10-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CpPa04_RS06855 3a868c216ac25eb7aaf8d7a3e00305ae 472 Pfam PF02887 Pyruvate kinase, alpha/beta domain 353 464 2.0E-26 T 10-03-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CpPa04_RS08200 b48acd0519d735b1e454ddc74f1c977a 867 Pfam PF04738 Lantibiotic dehydratase, C terminus 148 440 1.1E-11 T 10-03-2017 IPR006827 Lantibiotic dehydratase, C-terminal CpPa04_RS01765 26bf5cb3833a1dc40ca51a786d4d30a5 155 Pfam PF03780 Asp23 family, cell envelope-related function 25 135 1.7E-30 T 10-03-2017 IPR005531 Alkaline shock protein Asp23 CpPa04_RS02320 b9e70a7153560cad02e31830e795e448 350 Pfam PF01032 FecCD transport family 31 342 2.1E-96 T 10-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CpPa04_RS02320 b9e70a7153560cad02e31830e795e448 350 Gene3D G3DSA:1.10.3470.10 17 345 2.5E-107 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS02320 b9e70a7153560cad02e31830e795e448 350 SUPERFAMILY SSF81345 14 342 1.44E-85 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS06580 2439dc725f6bc09bbde2bde1ec73a952 463 Gene3D G3DSA:3.30.390.30 335 458 2.2E-38 T 10-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CpPa04_RS06580 2439dc725f6bc09bbde2bde1ec73a952 463 Gene3D G3DSA:3.50.50.60 271 334 8.1E-44 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS06580 2439dc725f6bc09bbde2bde1ec73a952 463 Gene3D G3DSA:3.50.50.60 7 152 8.1E-44 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS06580 2439dc725f6bc09bbde2bde1ec73a952 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 141 159 6.2E-18 T 10-03-2017 CpPa04_RS06580 2439dc725f6bc09bbde2bde1ec73a952 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 6.2E-18 T 10-03-2017 CpPa04_RS06580 2439dc725f6bc09bbde2bde1ec73a952 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 6.2E-18 T 10-03-2017 CpPa04_RS06580 2439dc725f6bc09bbde2bde1ec73a952 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 180 198 6.2E-18 T 10-03-2017 CpPa04_RS06580 2439dc725f6bc09bbde2bde1ec73a952 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 6.2E-18 T 10-03-2017 CpPa04_RS06580 2439dc725f6bc09bbde2bde1ec73a952 463 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 10-03-2017 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CpPa04_RS06580 2439dc725f6bc09bbde2bde1ec73a952 463 TIGRFAM TIGR03452 mycothione_red: mycothione reductase 7 460 2.3E-242 T 10-03-2017 IPR017817 Mycothione reductase MetaCyc: PWY-6421 CpPa04_RS06580 2439dc725f6bc09bbde2bde1ec73a952 463 SUPERFAMILY SSF55424 344 457 4.47E-32 T 10-03-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CpPa04_RS06580 2439dc725f6bc09bbde2bde1ec73a952 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 3.7E-41 T 10-03-2017 CpPa04_RS06580 2439dc725f6bc09bbde2bde1ec73a952 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 3.7E-41 T 10-03-2017 CpPa04_RS06580 2439dc725f6bc09bbde2bde1ec73a952 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 180 205 3.7E-41 T 10-03-2017 CpPa04_RS06580 2439dc725f6bc09bbde2bde1ec73a952 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 3.7E-41 T 10-03-2017 CpPa04_RS06580 2439dc725f6bc09bbde2bde1ec73a952 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 3.7E-41 T 10-03-2017 CpPa04_RS06580 2439dc725f6bc09bbde2bde1ec73a952 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 144 153 3.7E-41 T 10-03-2017 CpPa04_RS06580 2439dc725f6bc09bbde2bde1ec73a952 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 3.7E-41 T 10-03-2017 CpPa04_RS06580 2439dc725f6bc09bbde2bde1ec73a952 463 PIRSF PIRSF000350 1 448 5.8E-77 T 10-03-2017 CpPa04_RS06580 2439dc725f6bc09bbde2bde1ec73a952 463 SUPERFAMILY SSF51905 7 318 5.0E-39 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS06580 2439dc725f6bc09bbde2bde1ec73a952 463 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 326 2.0E-46 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS06580 2439dc725f6bc09bbde2bde1ec73a952 463 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 454 7.5E-27 T 10-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CpPa04_RS06580 2439dc725f6bc09bbde2bde1ec73a952 463 Gene3D G3DSA:3.50.50.60 162 270 5.9E-29 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS10550 6e23cf7fa6e6cdcdc94b73e72f427de4 439 PRINTS PR00173 Glutamate-aspartate symporter signature 206 225 2.9E-7 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS10550 6e23cf7fa6e6cdcdc94b73e72f427de4 439 PRINTS PR00173 Glutamate-aspartate symporter signature 339 359 2.9E-7 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS10550 6e23cf7fa6e6cdcdc94b73e72f427de4 439 PRINTS PR00173 Glutamate-aspartate symporter signature 276 302 2.9E-7 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS10550 6e23cf7fa6e6cdcdc94b73e72f427de4 439 PRINTS PR00173 Glutamate-aspartate symporter signature 46 66 2.9E-7 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS10550 6e23cf7fa6e6cdcdc94b73e72f427de4 439 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 2.9E-7 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS10550 6e23cf7fa6e6cdcdc94b73e72f427de4 439 Pfam PF00375 Sodium:dicarboxylate symporter family 10 385 1.2E-77 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS10550 6e23cf7fa6e6cdcdc94b73e72f427de4 439 SUPERFAMILY SSF118215 10 385 2.22E-80 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS10550 6e23cf7fa6e6cdcdc94b73e72f427de4 439 Gene3D G3DSA:1.10.3860.10 6 387 7.0E-63 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS02675 9505fb7396cb9ca8db08126eb1d2be70 424 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 18 422 5.1E-118 T 10-03-2017 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CpPa04_RS02675 9505fb7396cb9ca8db08126eb1d2be70 424 ProSitePatterns PS00104 EPSP synthase signature 1. 86 100 - T 10-03-2017 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CpPa04_RS02675 9505fb7396cb9ca8db08126eb1d2be70 424 Gene3D G3DSA:3.65.10.10 232 421 1.6E-53 T 10-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 CpPa04_RS02675 9505fb7396cb9ca8db08126eb1d2be70 424 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 11 416 4.3E-114 T 10-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 CpPa04_RS02675 9505fb7396cb9ca8db08126eb1d2be70 424 SUPERFAMILY SSF55205 13 421 1.64E-102 T 10-03-2017 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CpPa04_RS02675 9505fb7396cb9ca8db08126eb1d2be70 424 ProSitePatterns PS00885 EPSP synthase signature 2. 337 355 - T 10-03-2017 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CpPa04_RS02675 9505fb7396cb9ca8db08126eb1d2be70 424 Gene3D G3DSA:3.65.10.10 24 231 1.7E-61 T 10-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 CpPa04_RS02675 9505fb7396cb9ca8db08126eb1d2be70 424 PIRSF PIRSF000505 3 424 5.6E-116 T 10-03-2017 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CpPa04_RS02675 9505fb7396cb9ca8db08126eb1d2be70 424 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 12 424 29.107 T 10-03-2017 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CpPa04_RS05130 f5c1b6bfa72ca2a4626fdb0721e64014 356 Pfam PF01544 CorA-like Mg2+ transporter protein 60 350 2.5E-58 T 10-03-2017 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CpPa04_RS05130 f5c1b6bfa72ca2a4626fdb0721e64014 356 Gene3D G3DSA:1.20.58.340 278 354 1.5E-23 T 10-03-2017 CpPa04_RS05130 f5c1b6bfa72ca2a4626fdb0721e64014 356 SUPERFAMILY SSF144083 289 351 1.83E-17 T 10-03-2017 CpPa04_RS05130 f5c1b6bfa72ca2a4626fdb0721e64014 356 SUPERFAMILY SSF143865 27 283 9.94E-48 T 10-03-2017 CpPa04_RS05130 f5c1b6bfa72ca2a4626fdb0721e64014 356 Gene3D G3DSA:1.20.58.340 164 276 6.2E-27 T 10-03-2017 CpPa04_RS05130 f5c1b6bfa72ca2a4626fdb0721e64014 356 Gene3D G3DSA:3.30.460.20 23 154 2.3E-31 T 10-03-2017 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 Pfam PF08354 Domain of unknown function (DUF1729) 816 868 5.3E-17 T 10-03-2017 IPR013565 Domain of unknown function DUF1729 GO:0004318|GO:0055114 KEGG: 00061+4.2.1.59+2.3.1.39+1.3.1.9+3.1.2.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-4381|MetaCyc: PWY-5142|MetaCyc: PWY-5147|MetaCyc: PWY-5366|MetaCyc: PWY-5367|MetaCyc: PWY-5966|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-6799|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7723|MetaCyc: PWYG-321 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 PRINTS PR01483 Fatty acid synthase signature 712 730 7.7E-100 T 10-03-2017 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 PRINTS PR01483 Fatty acid synthase signature 391 411 7.7E-100 T 10-03-2017 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 PRINTS PR01483 Fatty acid synthase signature 417 435 7.7E-100 T 10-03-2017 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 PRINTS PR01483 Fatty acid synthase signature 542 561 7.7E-100 T 10-03-2017 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 PRINTS PR01483 Fatty acid synthase signature 1298 1317 7.7E-100 T 10-03-2017 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 PRINTS PR01483 Fatty acid synthase signature 1400 1419 7.7E-100 T 10-03-2017 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 PRINTS PR01483 Fatty acid synthase signature 522 540 7.7E-100 T 10-03-2017 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 PRINTS PR01483 Fatty acid synthase signature 1436 1457 7.7E-100 T 10-03-2017 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 PRINTS PR01483 Fatty acid synthase signature 810 834 7.7E-100 T 10-03-2017 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 PRINTS PR01483 Fatty acid synthase signature 1184 1206 7.7E-100 T 10-03-2017 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 PRINTS PR01483 Fatty acid synthase signature 1319 1342 7.7E-100 T 10-03-2017 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 PRINTS PR01483 Fatty acid synthase signature 1207 1228 7.7E-100 T 10-03-2017 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 SUPERFAMILY SSF53901 2734 2946 3.72E-32 T 10-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2773 2897 8.8E-23 T 10-03-2017 IPR014031 Beta-ketoacyl synthase, C-terminal CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 Pfam PF00698 Acyl transferase domain 1308 1505 4.1E-33 T 10-03-2017 IPR014043 Acyl transferase CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 Gene3D G3DSA:3.40.366.10 265 352 2.2E-27 T 10-03-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 Gene3D G3DSA:3.40.366.10 1621 1690 1.5E-43 T 10-03-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 Gene3D G3DSA:3.40.366.10 23 163 2.2E-27 T 10-03-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 Gene3D G3DSA:3.40.366.10 1532 1586 1.5E-43 T 10-03-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 Gene3D G3DSA:3.40.366.10 1303 1443 1.5E-43 T 10-03-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 Gene3D G3DSA:3.40.50.720 2073 2295 8.6E-8 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 1309 1712 9.6E-7 T 10-03-2017 IPR020801 Polyketide synthase, acyl transferase domain CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 SUPERFAMILY SSF52151 1595 1673 4.01E-33 T 10-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 SUPERFAMILY SSF52151 1307 1449 4.01E-33 T 10-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 SUPERFAMILY SSF52151 1534 1555 4.01E-33 T 10-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 SUPERFAMILY SSF51412 382 644 2.11E-15 T 10-03-2017 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 Gene3D G3DSA:3.40.47.10 2536 2775 3.6E-32 T 10-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2554 2762 4.3E-28 T 10-03-2017 IPR014030 Beta-ketoacyl synthase, N-terminal CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 Gene3D G3DSA:3.40.47.10 2782 2939 3.7E-28 T 10-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 SUPERFAMILY SSF52151 267 351 3.4E-22 T 10-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 SUPERFAMILY SSF52151 26 169 3.4E-22 T 10-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 Gene3D G3DSA:3.10.129.10 1136 1302 5.2E-26 T 10-03-2017 IPR029069 HotDog domain CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 Gene3D G3DSA:3.20.20.70 386 637 1.4E-9 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 2667 2683 - T 10-03-2017 IPR018201 Beta-ketoacyl synthase, active site CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 Pfam PF01575 MaoC like domain 1169 1283 2.1E-17 T 10-03-2017 IPR002539 MaoC-like domain CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 SUPERFAMILY SSF51735 2075 2319 1.14E-9 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 SUPERFAMILY SSF53901 2546 2771 2.74E-29 T 10-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CpPa04_RS08330 ff831a82219afd8a4a99ef0aedf5df6c 3032 SUPERFAMILY SSF54637 1187 1302 4.42E-16 T 10-03-2017 IPR029069 HotDog domain CpPa04_RS05785 b19f2d27e7375570a723d73929d45816 187 Hamap MF_00141 Elongation factor P [efp]. 1 185 48.988 T 10-03-2017 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CpPa04_RS05785 b19f2d27e7375570a723d73929d45816 187 Gene3D G3DSA:2.30.30.30 3 63 4.0E-29 T 10-03-2017 IPR014722 Ribosomal protein L2 domain 2 CpPa04_RS05785 b19f2d27e7375570a723d73929d45816 187 PIRSF PIRSF005901 1 186 9.4E-64 T 10-03-2017 IPR020599 Translation elongation factor P/YeiP CpPa04_RS05785 b19f2d27e7375570a723d73929d45816 187 SUPERFAMILY SSF50249 129 185 2.23E-17 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS05785 b19f2d27e7375570a723d73929d45816 187 Gene3D G3DSA:2.40.50.140 129 185 8.2E-28 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS05785 b19f2d27e7375570a723d73929d45816 187 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 60 2.8E-24 T 10-03-2017 IPR013185 Translation elongation factor, KOW-like CpPa04_RS05785 b19f2d27e7375570a723d73929d45816 187 Gene3D G3DSA:2.40.50.140 65 126 4.9E-23 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS05785 b19f2d27e7375570a723d73929d45816 187 TIGRFAM TIGR00038 efp: translation elongation factor P 3 185 1.7E-75 T 10-03-2017 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CpPa04_RS05785 b19f2d27e7375570a723d73929d45816 187 SMART SM00841 129 184 3.6E-32 T 10-03-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CpPa04_RS05785 b19f2d27e7375570a723d73929d45816 187 SUPERFAMILY SSF50104 3 63 1.44E-18 T 10-03-2017 IPR008991 Translation protein SH3-like domain CpPa04_RS05785 b19f2d27e7375570a723d73929d45816 187 SUPERFAMILY SSF50249 65 126 2.36E-16 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS05785 b19f2d27e7375570a723d73929d45816 187 SMART SM01185 67 121 3.2E-26 T 10-03-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CpPa04_RS05785 b19f2d27e7375570a723d73929d45816 187 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 121 3.7E-22 T 10-03-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CpPa04_RS05785 b19f2d27e7375570a723d73929d45816 187 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 10-03-2017 IPR013852 Translation elongation factor P/YeiP, conserved site CpPa04_RS05785 b19f2d27e7375570a723d73929d45816 187 Pfam PF09285 Elongation factor P, C-terminal 129 184 2.0E-25 T 10-03-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CpPa04_RS06745 23ae293a96969e08376d75751c90f232 535 Gene3D G3DSA:1.20.120.140 2 89 3.5E-32 T 10-03-2017 CpPa04_RS06745 23ae293a96969e08376d75751c90f232 535 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 282 295 - T 10-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CpPa04_RS06745 23ae293a96969e08376d75751c90f232 535 SMART SM00382 99 314 2.4E-12 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS06745 23ae293a96969e08376d75751c90f232 535 SUPERFAMILY SSF47446 341 441 1.11E-32 T 10-03-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CpPa04_RS06745 23ae293a96969e08376d75751c90f232 535 Gene3D G3DSA:3.40.50.300 93 310 2.4E-77 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06745 23ae293a96969e08376d75751c90f232 535 Gene3D G3DSA:1.10.260.30 341 442 1.9E-35 T 10-03-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CpPa04_RS06745 23ae293a96969e08376d75751c90f232 535 SMART SM00962 100 309 1.0E-108 T 10-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CpPa04_RS06745 23ae293a96969e08376d75751c90f232 535 Pfam PF02978 Signal peptide binding domain 341 438 5.5E-29 T 10-03-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CpPa04_RS06745 23ae293a96969e08376d75751c90f232 535 SUPERFAMILY SSF52540 42 367 6.64E-59 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06745 23ae293a96969e08376d75751c90f232 535 Pfam PF00448 SRP54-type protein, GTPase domain 100 309 7.7E-69 T 10-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CpPa04_RS06745 23ae293a96969e08376d75751c90f232 535 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 487 33.982 T 10-03-2017 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 CpPa04_RS06745 23ae293a96969e08376d75751c90f232 535 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.5E-20 T 10-03-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CpPa04_RS06745 23ae293a96969e08376d75751c90f232 535 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 440 1.0E-174 T 10-03-2017 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 CpPa04_RS06745 23ae293a96969e08376d75751c90f232 535 SMART SM00963 1 86 6.2E-32 T 10-03-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 Gene3D G3DSA:3.40.366.10 837 963 1.6E-52 T 10-03-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 Gene3D G3DSA:3.40.366.10 641 761 1.6E-52 T 10-03-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 364 481 5.1E-43 T 10-03-2017 IPR014031 Beta-ketoacyl synthase, C-terminal CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 SMART SM00825 Beta-ketoacyl synthase 111 534 3.3E-186 T 10-03-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 SMART SM00824 Thioesterase 1352 1602 7.3E-4 T 10-03-2017 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 SUPERFAMILY SSF47336 11 124 5.5E-16 T 10-03-2017 IPR009081 Phosphopantetheine binding ACP domain CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 Gene3D G3DSA:1.10.1200.10 11 117 9.4E-13 T 10-03-2017 IPR009081 Phosphopantetheine binding ACP domain CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 644 950 1.3E-68 T 10-03-2017 IPR020801 Polyketide synthase, acyl transferase domain CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 SUPERFAMILY SSF53901 509 529 2.76E-89 T 10-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 SUPERFAMILY SSF53901 106 477 2.76E-89 T 10-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 SUPERFAMILY SSF52151 642 766 7.59E-50 T 10-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 SUPERFAMILY SSF52151 838 930 7.59E-50 T 10-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 Pfam PF00550 Phosphopantetheine attachment site 19 83 3.6E-9 T 10-03-2017 IPR009081 Phosphopantetheine binding ACP domain CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 Pfam PF00550 Phosphopantetheine attachment site 1144 1191 3.2E-7 T 10-03-2017 IPR009081 Phosphopantetheine binding ACP domain CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 Gene3D G3DSA:3.40.47.10 369 534 1.6E-58 T 10-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 SUPERFAMILY SSF47336 1138 1230 6.41E-13 T 10-03-2017 IPR009081 Phosphopantetheine binding ACP domain CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 Gene3D G3DSA:3.30.70.250 769 836 2.3E-4 T 10-03-2017 CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 SUPERFAMILY SSF55048 772 836 8.89E-8 T 10-03-2017 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 Pfam PF00698 Acyl transferase domain 642 965 2.2E-56 T 10-03-2017 IPR014043 Acyl transferase CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 269 285 - T 10-03-2017 IPR018201 Beta-ketoacyl synthase, active site CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 484 563 2.8E-10 T 10-03-2017 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 SMART SM00823 Phosphopantetheine attachment site 1142 1213 5.1E-4 T 10-03-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 SMART SM00823 Phosphopantetheine attachment site 17 88 1.4E-7 T 10-03-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 SUPERFAMILY SSF53474 1335 1598 4.12E-42 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 Pfam PF00975 Thioesterase domain 1352 1449 2.2E-18 T 10-03-2017 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 Gene3D G3DSA:3.40.50.1820 1536 1603 2.2E-32 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 Gene3D G3DSA:3.40.50.1820 1340 1445 2.2E-32 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 Gene3D G3DSA:1.10.1200.10 1138 1215 4.0E-10 T 10-03-2017 IPR009081 Phosphopantetheine binding ACP domain CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 110 356 7.1E-82 T 10-03-2017 IPR014030 Beta-ketoacyl synthase, N-terminal CpPa04_RS09920 2a7f892692bf040a5f73bde6cd82e617 1611 Gene3D G3DSA:3.40.47.10 118 368 1.8E-90 T 10-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CpPa04_RS04610 6e4492ce5b5e03344d48ba49c8285aa7 334 PIRSF PIRSF001619 2 328 2.9E-103 T 10-03-2017 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CpPa04_RS04610 6e4492ce5b5e03344d48ba49c8285aa7 334 SMART SM00876 233 323 1.2E-27 T 10-03-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CpPa04_RS04610 6e4492ce5b5e03344d48ba49c8285aa7 334 Gene3D G3DSA:3.20.20.70 25 323 3.1E-85 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS04610 6e4492ce5b5e03344d48ba49c8285aa7 334 SMART SM00729 56 261 3.4E-40 T 10-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CpPa04_RS04610 6e4492ce5b5e03344d48ba49c8285aa7 334 TIGRFAM TIGR00433 bioB: biotin synthase 28 321 2.0E-115 T 10-03-2017 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CpPa04_RS04610 6e4492ce5b5e03344d48ba49c8285aa7 334 SUPERFAMILY SSF102114 27 322 7.59E-75 T 10-03-2017 CpPa04_RS04610 6e4492ce5b5e03344d48ba49c8285aa7 334 Hamap MF_01694 Biotin synthase [bioB]. 19 324 41.068 T 10-03-2017 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CpPa04_RS04610 6e4492ce5b5e03344d48ba49c8285aa7 334 Pfam PF04055 Radical SAM superfamily 65 220 3.5E-19 T 10-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CpPa04_RS04610 6e4492ce5b5e03344d48ba49c8285aa7 334 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 233 321 1.9E-13 T 10-03-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CpPa04_RS01835 745135eb07d79462e823366725af6581 690 SUPERFAMILY SSF52540 5 252 7.06E-62 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01835 745135eb07d79462e823366725af6581 690 SUPERFAMILY SSF52540 356 606 6.39E-63 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01835 745135eb07d79462e823366725af6581 690 ProSitePatterns PS00211 ABC transporters family signature. 507 521 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS01835 745135eb07d79462e823366725af6581 690 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 318 1.2E-22 T 10-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CpPa04_RS01835 745135eb07d79462e823366725af6581 690 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 585 684 5.0E-17 T 10-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CpPa04_RS01835 745135eb07d79462e823366725af6581 690 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 299 1.4E-15 T 10-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CpPa04_RS01835 745135eb07d79462e823366725af6581 690 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 586 648 2.0E-14 T 10-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CpPa04_RS01835 745135eb07d79462e823366725af6581 690 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS01835 745135eb07d79462e823366725af6581 690 Pfam PF00005 ABC transporter 26 182 4.4E-24 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS01835 745135eb07d79462e823366725af6581 690 Pfam PF00005 ABC transporter 384 534 4.8E-28 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS01835 745135eb07d79462e823366725af6581 690 SMART SM00382 392 584 9.8E-14 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS01835 745135eb07d79462e823366725af6581 690 SMART SM00382 34 232 2.2E-13 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS01835 745135eb07d79462e823366725af6581 690 Gene3D G3DSA:3.40.50.300 355 608 1.0E-74 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01835 745135eb07d79462e823366725af6581 690 Gene3D G3DSA:3.40.50.300 4 256 2.4E-67 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06710 b6a162ab3f3f2a65373f7cb8d1630ac4 767 SMART SM00732 310 412 3.7E-29 T 10-03-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 CpPa04_RS06710 b6a162ab3f3f2a65373f7cb8d1630ac4 767 Pfam PF00575 S1 RNA binding domain 638 708 1.4E-18 T 10-03-2017 IPR003029 S1 domain GO:0003676 CpPa04_RS06710 b6a162ab3f3f2a65373f7cb8d1630ac4 767 SUPERFAMILY SSF47781 549 620 4.89E-20 T 10-03-2017 IPR010994 RuvA domain 2-like CpPa04_RS06710 b6a162ab3f3f2a65373f7cb8d1630ac4 767 Pfam PF09371 Tex-like protein N-terminal domain 6 185 4.5E-62 T 10-03-2017 IPR018974 Tex-like protein, N-terminal CpPa04_RS06710 b6a162ab3f3f2a65373f7cb8d1630ac4 767 SUPERFAMILY SSF158832 4 305 5.1E-104 T 10-03-2017 CpPa04_RS06710 b6a162ab3f3f2a65373f7cb8d1630ac4 767 SUPERFAMILY SSF53098 306 457 9.1E-47 T 10-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CpPa04_RS06710 b6a162ab3f3f2a65373f7cb8d1630ac4 767 SUPERFAMILY SSF50249 626 711 4.03E-24 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS06710 b6a162ab3f3f2a65373f7cb8d1630ac4 767 Pfam PF16921 Tex protein YqgF-like domain 311 439 1.2E-49 T 10-03-2017 IPR032639 Tex protein, YqgF-like domain CpPa04_RS06710 b6a162ab3f3f2a65373f7cb8d1630ac4 767 Pfam PF12836 Helix-hairpin-helix motif 479 543 1.0E-28 T 10-03-2017 CpPa04_RS06710 b6a162ab3f3f2a65373f7cb8d1630ac4 767 SUPERFAMILY SSF47781 458 545 1.11E-28 T 10-03-2017 IPR010994 RuvA domain 2-like CpPa04_RS06710 b6a162ab3f3f2a65373f7cb8d1630ac4 767 Gene3D G3DSA:1.10.3500.10 107 306 6.6E-87 T 10-03-2017 IPR023323 Tex-like domain CpPa04_RS06710 b6a162ab3f3f2a65373f7cb8d1630ac4 767 Gene3D G3DSA:1.10.3500.10 439 486 6.6E-87 T 10-03-2017 IPR023323 Tex-like domain CpPa04_RS06710 b6a162ab3f3f2a65373f7cb8d1630ac4 767 Gene3D G3DSA:2.40.50.140 625 708 7.3E-27 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS06710 b6a162ab3f3f2a65373f7cb8d1630ac4 767 Gene3D G3DSA:1.10.10.650 2 105 7.0E-42 T 10-03-2017 IPR023319 Tex-like protein, HTH domain CpPa04_RS06710 b6a162ab3f3f2a65373f7cb8d1630ac4 767 SMART SM00316 637 708 1.2E-23 T 10-03-2017 IPR022967 RNA-binding domain, S1 CpPa04_RS06710 b6a162ab3f3f2a65373f7cb8d1630ac4 767 Gene3D G3DSA:1.10.150.310 487 618 5.6E-46 T 10-03-2017 IPR023097 Tex RuvX-like domain CpPa04_RS06710 b6a162ab3f3f2a65373f7cb8d1630ac4 767 Gene3D G3DSA:3.30.420.140 310 438 1.2E-48 T 10-03-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 CpPa04_RS03860 61135fe6deceac70adb26130377cec78 526 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 82 103 - T 10-03-2017 IPR023765 Solute-binding protein family 5, conserved site CpPa04_RS03860 61135fe6deceac70adb26130377cec78 526 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 87 447 7.7E-58 T 10-03-2017 IPR000914 Solute-binding protein family 5 domain CpPa04_RS03860 61135fe6deceac70adb26130377cec78 526 Gene3D G3DSA:3.40.190.10 197 310 4.8E-26 T 10-03-2017 CpPa04_RS03860 61135fe6deceac70adb26130377cec78 526 Gene3D G3DSA:3.10.105.10 311 496 4.5E-44 T 10-03-2017 CpPa04_RS03860 61135fe6deceac70adb26130377cec78 526 Gene3D G3DSA:3.90.76.10 47 196 1.2E-32 T 10-03-2017 CpPa04_RS03860 61135fe6deceac70adb26130377cec78 526 SUPERFAMILY SSF53850 30 523 2.35E-97 T 10-03-2017 CpPa04_RS03860 61135fe6deceac70adb26130377cec78 526 PIRSF PIRSF002741 1 517 8.3E-70 T 10-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CpPa04_RS03625 c81269cdf6179ed966f657d29e2b15f0 425 ProSitePatterns PS00164 Enolase signature. 331 344 - T 10-03-2017 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS03625 c81269cdf6179ed966f657d29e2b15f0 425 Pfam PF00113 Enolase, C-terminal TIM barrel domain 139 419 1.9E-133 T 10-03-2017 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CpPa04_RS03625 c81269cdf6179ed966f657d29e2b15f0 425 SMART SM01193 4 133 2.8E-90 T 10-03-2017 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CpPa04_RS03625 c81269cdf6179ed966f657d29e2b15f0 425 SUPERFAMILY SSF51604 137 421 1.77E-130 T 10-03-2017 IPR029065 Enolase C-terminal domain-like CpPa04_RS03625 c81269cdf6179ed966f657d29e2b15f0 425 Gene3D G3DSA:3.30.390.10 4 124 7.6E-53 T 10-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CpPa04_RS03625 c81269cdf6179ed966f657d29e2b15f0 425 Hamap MF_00318 Enolase [eno]. 2 408 45.12 T 10-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CpPa04_RS03625 c81269cdf6179ed966f657d29e2b15f0 425 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 422 2.0E-203 T 10-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CpPa04_RS03625 c81269cdf6179ed966f657d29e2b15f0 425 Pfam PF03952 Enolase, N-terminal domain 4 133 2.2E-57 T 10-03-2017 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CpPa04_RS03625 c81269cdf6179ed966f657d29e2b15f0 425 SUPERFAMILY SSF54826 4 137 9.14E-55 T 10-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CpPa04_RS03625 c81269cdf6179ed966f657d29e2b15f0 425 SMART SM01192 138 422 6.2E-223 T 10-03-2017 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CpPa04_RS03625 c81269cdf6179ed966f657d29e2b15f0 425 PRINTS PR00148 Enolase signature 37 51 2.0E-47 T 10-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CpPa04_RS03625 c81269cdf6179ed966f657d29e2b15f0 425 PRINTS PR00148 Enolase signature 106 122 2.0E-47 T 10-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CpPa04_RS03625 c81269cdf6179ed966f657d29e2b15f0 425 PRINTS PR00148 Enolase signature 360 377 2.0E-47 T 10-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CpPa04_RS03625 c81269cdf6179ed966f657d29e2b15f0 425 PRINTS PR00148 Enolase signature 308 319 2.0E-47 T 10-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CpPa04_RS03625 c81269cdf6179ed966f657d29e2b15f0 425 PRINTS PR00148 Enolase signature 160 173 2.0E-47 T 10-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CpPa04_RS03625 c81269cdf6179ed966f657d29e2b15f0 425 PRINTS PR00148 Enolase signature 331 345 2.0E-47 T 10-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CpPa04_RS03625 c81269cdf6179ed966f657d29e2b15f0 425 Gene3D G3DSA:3.20.20.120 127 420 1.0E-136 T 10-03-2017 IPR029065 Enolase C-terminal domain-like CpPa04_RS03625 c81269cdf6179ed966f657d29e2b15f0 425 PIRSF PIRSF001400 1 421 6.7E-193 T 10-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CpPa04_RS04845 1aec9c577fc6ff63d4b04fc7e12183fd 163 Gene3D G3DSA:3.30.1360.40 84 157 6.1E-28 T 10-03-2017 IPR024946 Arginine repressor C-terminal-like domain CpPa04_RS04845 1aec9c577fc6ff63d4b04fc7e12183fd 163 SUPERFAMILY SSF46785 6 71 1.67E-16 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS04845 1aec9c577fc6ff63d4b04fc7e12183fd 163 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 99 156 7.0E-22 T 10-03-2017 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CpPa04_RS04845 1aec9c577fc6ff63d4b04fc7e12183fd 163 TIGRFAM TIGR01529 argR_whole: arginine repressor 11 156 6.4E-41 T 10-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 CpPa04_RS04845 1aec9c577fc6ff63d4b04fc7e12183fd 163 SUPERFAMILY SSF55252 91 157 9.03E-20 T 10-03-2017 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CpPa04_RS04845 1aec9c577fc6ff63d4b04fc7e12183fd 163 PRINTS PR01467 Bacterial arginine repressor signature 42 57 5.9E-25 T 10-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 CpPa04_RS04845 1aec9c577fc6ff63d4b04fc7e12183fd 163 PRINTS PR01467 Bacterial arginine repressor signature 129 144 5.9E-25 T 10-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 CpPa04_RS04845 1aec9c577fc6ff63d4b04fc7e12183fd 163 PRINTS PR01467 Bacterial arginine repressor signature 26 39 5.9E-25 T 10-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 CpPa04_RS04845 1aec9c577fc6ff63d4b04fc7e12183fd 163 PRINTS PR01467 Bacterial arginine repressor signature 99 112 5.9E-25 T 10-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 CpPa04_RS04845 1aec9c577fc6ff63d4b04fc7e12183fd 163 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 1.5E-23 T 10-03-2017 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 CpPa04_RS04845 1aec9c577fc6ff63d4b04fc7e12183fd 163 Pfam PF02863 Arginine repressor, C-terminal domain 92 156 4.4E-24 T 10-03-2017 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CpPa04_RS04845 1aec9c577fc6ff63d4b04fc7e12183fd 163 Hamap MF_00173 Arginine repressor [argR]. 1 163 55.938 T 10-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 CpPa04_RS04845 1aec9c577fc6ff63d4b04fc7e12183fd 163 Gene3D G3DSA:1.10.10.10 14 69 7.7E-20 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS06005 13fb46a148aa5d09cfe99d9100a51979 366 Gene3D G3DSA:3.40.50.2000 166 335 1.1E-23 T 10-03-2017 CpPa04_RS06005 13fb46a148aa5d09cfe99d9100a51979 366 Pfam PF13692 Glycosyl transferases group 1 192 323 9.5E-28 T 10-03-2017 CpPa04_RS06005 13fb46a148aa5d09cfe99d9100a51979 366 Pfam PF13439 Glycosyltransferase Family 4 14 173 1.9E-24 T 10-03-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CpPa04_RS06005 13fb46a148aa5d09cfe99d9100a51979 366 SUPERFAMILY SSF53756 2 359 3.84E-73 T 10-03-2017 CpPa04_RS03750 7e4c10e489969f658a2be9bf0e7a3610 467 Pfam PF10415 Fumarase C C-terminus 404 461 1.4E-20 T 10-03-2017 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CpPa04_RS03750 7e4c10e489969f658a2be9bf0e7a3610 467 Gene3D G3DSA:1.10.40.30 404 460 6.8E-22 T 10-03-2017 CpPa04_RS03750 7e4c10e489969f658a2be9bf0e7a3610 467 PRINTS PR00145 Argininosuccinate lyase family signature 313 329 9.2E-6 T 10-03-2017 CpPa04_RS03750 7e4c10e489969f658a2be9bf0e7a3610 467 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 9.2E-6 T 10-03-2017 CpPa04_RS03750 7e4c10e489969f658a2be9bf0e7a3610 467 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 9.2E-6 T 10-03-2017 CpPa04_RS03750 7e4c10e489969f658a2be9bf0e7a3610 467 SUPERFAMILY SSF48557 6 457 1.57E-142 T 10-03-2017 IPR008948 L-Aspartase-like GO:0003824 CpPa04_RS03750 7e4c10e489969f658a2be9bf0e7a3610 467 Gene3D G3DSA:1.10.275.10 5 133 2.2E-52 T 10-03-2017 IPR024083 Fumarase/histidase, N-terminal CpPa04_RS03750 7e4c10e489969f658a2be9bf0e7a3610 467 PRINTS PR00149 Fumarate lyase superfamily signature 267 294 2.5E-35 T 10-03-2017 IPR000362 Fumarate lyase family CpPa04_RS03750 7e4c10e489969f658a2be9bf0e7a3610 467 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 2.5E-35 T 10-03-2017 IPR000362 Fumarate lyase family CpPa04_RS03750 7e4c10e489969f658a2be9bf0e7a3610 467 PRINTS PR00149 Fumarate lyase superfamily signature 313 329 2.5E-35 T 10-03-2017 IPR000362 Fumarate lyase family CpPa04_RS03750 7e4c10e489969f658a2be9bf0e7a3610 467 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 2.5E-35 T 10-03-2017 IPR000362 Fumarate lyase family CpPa04_RS03750 7e4c10e489969f658a2be9bf0e7a3610 467 ProSitePatterns PS00163 Fumarate lyases signature. 313 322 - T 10-03-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 CpPa04_RS03750 7e4c10e489969f658a2be9bf0e7a3610 467 Hamap MF_00743 Fumarate hydratase class II [fumC]. 6 463 81.375 T 10-03-2017 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CpPa04_RS03750 7e4c10e489969f658a2be9bf0e7a3610 467 Gene3D G3DSA:1.20.200.10 134 398 1.9E-98 T 10-03-2017 CpPa04_RS03750 7e4c10e489969f658a2be9bf0e7a3610 467 Pfam PF00206 Lyase 14 338 1.3E-102 T 10-03-2017 IPR022761 Fumarate lyase, N-terminal CpPa04_RS05850 65b6cc2815fb8b905e2642c5b708ea17 599 Gene3D G3DSA:2.40.50.140 5 107 1.1E-38 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS05850 65b6cc2815fb8b905e2642c5b708ea17 599 SUPERFAMILY SSF50249 4 106 1.6E-31 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS05850 65b6cc2815fb8b905e2642c5b708ea17 599 SUPERFAMILY SSF55261 295 417 2.45E-35 T 10-03-2017 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 CpPa04_RS05850 65b6cc2815fb8b905e2642c5b708ea17 599 SUPERFAMILY SSF55681 111 298 7.37E-100 T 10-03-2017 CpPa04_RS05850 65b6cc2815fb8b905e2642c5b708ea17 599 SUPERFAMILY SSF55681 422 591 7.37E-100 T 10-03-2017 CpPa04_RS05850 65b6cc2815fb8b905e2642c5b708ea17 599 Pfam PF01336 OB-fold nucleic acid binding domain 21 103 5.2E-19 T 10-03-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CpPa04_RS05850 65b6cc2815fb8b905e2642c5b708ea17 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 197 209 6.8E-25 T 10-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS05850 65b6cc2815fb8b905e2642c5b708ea17 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 214 227 6.8E-25 T 10-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS05850 65b6cc2815fb8b905e2642c5b708ea17 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 482 498 6.8E-25 T 10-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS05850 65b6cc2815fb8b905e2642c5b708ea17 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 526 540 6.8E-25 T 10-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS05850 65b6cc2815fb8b905e2642c5b708ea17 599 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 4 571 35.172 T 10-03-2017 CpPa04_RS05850 65b6cc2815fb8b905e2642c5b708ea17 599 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 5 590 1.7E-212 T 10-03-2017 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 Reactome: R-HSA-379726 CpPa04_RS05850 65b6cc2815fb8b905e2642c5b708ea17 599 Gene3D G3DSA:3.30.1360.30 283 410 1.0E-43 T 10-03-2017 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 CpPa04_RS05850 65b6cc2815fb8b905e2642c5b708ea17 599 Gene3D G3DSA:3.30.930.10 140 282 8.4E-105 T 10-03-2017 CpPa04_RS05850 65b6cc2815fb8b905e2642c5b708ea17 599 Gene3D G3DSA:3.30.930.10 411 592 8.4E-105 T 10-03-2017 CpPa04_RS05850 65b6cc2815fb8b905e2642c5b708ea17 599 Pfam PF02938 GAD domain 315 398 7.1E-16 T 10-03-2017 IPR029351 GAD domain Reactome: R-HSA-379726 CpPa04_RS05850 65b6cc2815fb8b905e2642c5b708ea17 599 Pfam PF00152 tRNA synthetases class II (D, K and N) 125 565 3.0E-99 T 10-03-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS01325 8068e482841540990919b6c8960a4af2 412 Gene3D G3DSA:1.10.287.130 147 205 3.8E-14 T 10-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CpPa04_RS01325 8068e482841540990919b6c8960a4af2 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 337 355 7.0E-21 T 10-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CpPa04_RS01325 8068e482841540990919b6c8960a4af2 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 302 316 7.0E-21 T 10-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CpPa04_RS01325 8068e482841540990919b6c8960a4af2 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 320 330 7.0E-21 T 10-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CpPa04_RS01325 8068e482841540990919b6c8960a4af2 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 374 7.0E-21 T 10-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CpPa04_RS01325 8068e482841540990919b6c8960a4af2 412 Gene3D G3DSA:3.30.565.10 206 379 1.0E-45 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS01325 8068e482841540990919b6c8960a4af2 412 SMART SM00388 153 219 1.5E-15 T 10-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CpPa04_RS01325 8068e482841540990919b6c8960a4af2 412 Pfam PF00512 His Kinase A (phospho-acceptor) domain 153 218 2.1E-13 T 10-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CpPa04_RS01325 8068e482841540990919b6c8960a4af2 412 SMART SM00387 264 377 2.1E-37 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS01325 8068e482841540990919b6c8960a4af2 412 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 264 374 1.0E-22 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS01325 8068e482841540990919b6c8960a4af2 412 SUPERFAMILY SSF47384 139 217 1.26E-14 T 10-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CpPa04_RS01325 8068e482841540990919b6c8960a4af2 412 SUPERFAMILY SSF55874 208 380 2.1E-44 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS07890 01ff1b12209dcd12e3200a01b084a4e4 232 Gene3D G3DSA:3.20.20.10 5 227 1.0E-79 T 10-03-2017 IPR029066 PLP-binding barrel CpPa04_RS07890 01ff1b12209dcd12e3200a01b084a4e4 232 SUPERFAMILY SSF51419 6 225 2.62E-69 T 10-03-2017 IPR029066 PLP-binding barrel CpPa04_RS07890 01ff1b12209dcd12e3200a01b084a4e4 232 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 11 227 2.7E-49 T 10-03-2017 IPR011078 Uncharacterised protein family UPF0001 CpPa04_RS07890 01ff1b12209dcd12e3200a01b084a4e4 232 PIRSF PIRSF004848 1 230 7.2E-65 T 10-03-2017 IPR011078 Uncharacterised protein family UPF0001 CpPa04_RS07890 01ff1b12209dcd12e3200a01b084a4e4 232 Pfam PF01168 Alanine racemase, N-terminal domain 24 227 2.4E-25 T 10-03-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CpPa04_RS01310 5a1633f4493b0046cbe005222ed320e8 568 Pfam PF13193 AMP-binding enzyme C-terminal domain 477 552 2.0E-13 T 10-03-2017 IPR025110 AMP-binding enzyme C-terminal domain CpPa04_RS01310 5a1633f4493b0046cbe005222ed320e8 568 Gene3D G3DSA:3.30.300.30 463 561 2.9E-30 T 10-03-2017 CpPa04_RS01310 5a1633f4493b0046cbe005222ed320e8 568 Pfam PF00501 AMP-binding enzyme 39 468 1.3E-101 T 10-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CpPa04_RS01310 5a1633f4493b0046cbe005222ed320e8 568 Gene3D G3DSA:3.40.50.980 229 383 7.2E-40 T 10-03-2017 CpPa04_RS01310 5a1633f4493b0046cbe005222ed320e8 568 ProSitePatterns PS00455 Putative AMP-binding domain signature. 219 230 - T 10-03-2017 IPR020845 AMP-binding, conserved site CpPa04_RS01310 5a1633f4493b0046cbe005222ed320e8 568 Gene3D G3DSA:2.30.38.10 384 459 1.1E-26 T 10-03-2017 CpPa04_RS01310 5a1633f4493b0046cbe005222ed320e8 568 SUPERFAMILY SSF56801 9 562 4.45E-149 T 10-03-2017 CpPa04_RS01310 5a1633f4493b0046cbe005222ed320e8 568 Gene3D G3DSA:3.40.50.980 25 139 8.9E-37 T 10-03-2017 CpPa04_RS01310 5a1633f4493b0046cbe005222ed320e8 568 Gene3D G3DSA:3.40.50.980 204 228 8.9E-37 T 10-03-2017 CpPa04_RS01085 0e1f0aa40b5bff800688369284449a1d 305 Pfam PF00561 alpha/beta hydrolase fold 45 159 3.0E-14 T 10-03-2017 IPR000073 Alpha/beta hydrolase fold-1 CpPa04_RS01085 0e1f0aa40b5bff800688369284449a1d 305 PRINTS PR00412 Epoxide hydrolase signature 126 139 7.7E-9 T 10-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 CpPa04_RS01085 0e1f0aa40b5bff800688369284449a1d 305 PRINTS PR00412 Epoxide hydrolase signature 48 66 7.7E-9 T 10-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 CpPa04_RS01085 0e1f0aa40b5bff800688369284449a1d 305 PRINTS PR00412 Epoxide hydrolase signature 112 125 7.7E-9 T 10-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 CpPa04_RS01085 0e1f0aa40b5bff800688369284449a1d 305 PRINTS PR00412 Epoxide hydrolase signature 278 300 7.7E-9 T 10-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 CpPa04_RS01085 0e1f0aa40b5bff800688369284449a1d 305 PRINTS PR00412 Epoxide hydrolase signature 68 83 7.7E-9 T 10-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 CpPa04_RS01085 0e1f0aa40b5bff800688369284449a1d 305 PRINTS PR00111 Alpha/beta hydrolase fold signature 68 83 1.3E-5 T 10-03-2017 IPR000073 Alpha/beta hydrolase fold-1 CpPa04_RS01085 0e1f0aa40b5bff800688369284449a1d 305 PRINTS PR00111 Alpha/beta hydrolase fold signature 126 139 1.3E-5 T 10-03-2017 IPR000073 Alpha/beta hydrolase fold-1 CpPa04_RS01085 0e1f0aa40b5bff800688369284449a1d 305 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 1.3E-5 T 10-03-2017 IPR000073 Alpha/beta hydrolase fold-1 CpPa04_RS01085 0e1f0aa40b5bff800688369284449a1d 305 SUPERFAMILY SSF53474 17 303 1.19E-45 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS01085 0e1f0aa40b5bff800688369284449a1d 305 Gene3D G3DSA:3.40.50.1820 9 303 5.3E-48 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS10080 755f758e3967af1ad173b7f721bbc44a 654 Pfam PF04213 Htaa 40 208 1.5E-36 T 10-03-2017 IPR007331 Htaa CpPa04_RS10080 755f758e3967af1ad173b7f721bbc44a 654 Gene3D G3DSA:2.130.10.10 272 544 5.9E-4 T 10-03-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CpPa04_RS10080 755f758e3967af1ad173b7f721bbc44a 654 SUPERFAMILY SSF50969 503 547 1.33E-5 T 10-03-2017 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CpPa04_RS10080 755f758e3967af1ad173b7f721bbc44a 654 SUPERFAMILY SSF50969 236 387 1.33E-5 T 10-03-2017 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CpPa04_RS02010 9a5740160e60ad0e44df0aa65ab66927 338 Gene3D G3DSA:1.10.150.20 240 319 1.2E-30 T 10-03-2017 CpPa04_RS02010 9a5740160e60ad0e44df0aa65ab66927 338 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 310 34.173 T 10-03-2017 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS02010 9a5740160e60ad0e44df0aa65ab66927 338 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 244 301 5.4E-25 T 10-03-2017 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS02010 9a5740160e60ad0e44df0aa65ab66927 338 SMART SM00662 18 224 1.8E-90 T 10-03-2017 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS02010 9a5740160e60ad0e44df0aa65ab66927 338 SUPERFAMILY SSF55257 169 219 7.07E-26 T 10-03-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS02010 9a5740160e60ad0e44df0aa65ab66927 338 SUPERFAMILY SSF55257 13 48 7.07E-26 T 10-03-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS02010 9a5740160e60ad0e44df0aa65ab66927 338 SUPERFAMILY SSF47789 243 318 2.88E-23 T 10-03-2017 CpPa04_RS02010 9a5740160e60ad0e44df0aa65ab66927 338 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 19 309 2.0E-110 T 10-03-2017 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS02010 9a5740160e60ad0e44df0aa65ab66927 338 SUPERFAMILY SSF56553 48 168 1.02E-42 T 10-03-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS02010 9a5740160e60ad0e44df0aa65ab66927 338 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 249 319 2.0E-34 T 10-03-2017 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS02010 9a5740160e60ad0e44df0aa65ab66927 338 Gene3D G3DSA:2.170.120.12 62 167 3.6E-44 T 10-03-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS02010 9a5740160e60ad0e44df0aa65ab66927 338 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 24 217 5.7E-20 T 10-03-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS02010 9a5740160e60ad0e44df0aa65ab66927 338 Gene3D G3DSA:3.30.1360.10 7 61 1.0E-10 T 10-03-2017 CpPa04_RS02010 9a5740160e60ad0e44df0aa65ab66927 338 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 55 150 8.0E-24 T 10-03-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS02205 8796d2e2f5a42f25ea8422daaa4428a6 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 179 7.5E-14 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS02205 8796d2e2f5a42f25ea8422daaa4428a6 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 195 7.5E-14 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS02205 8796d2e2f5a42f25ea8422daaa4428a6 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 195 207 7.5E-14 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS02205 8796d2e2f5a42f25ea8422daaa4428a6 225 Gene3D G3DSA:3.40.50.2300 1 113 6.1E-24 T 10-03-2017 CpPa04_RS02205 8796d2e2f5a42f25ea8422daaa4428a6 225 SUPERFAMILY SSF52172 1 127 1.34E-23 T 10-03-2017 IPR011006 CheY-like superfamily CpPa04_RS02205 8796d2e2f5a42f25ea8422daaa4428a6 225 Pfam PF00072 Response regulator receiver domain 3 109 2.1E-16 T 10-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CpPa04_RS02205 8796d2e2f5a42f25ea8422daaa4428a6 225 ProSitePatterns PS00622 LuxR-type HTH domain signature. 179 206 - T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS02205 8796d2e2f5a42f25ea8422daaa4428a6 225 Gene3D G3DSA:1.10.10.10 114 224 7.9E-34 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS02205 8796d2e2f5a42f25ea8422daaa4428a6 225 SMART SM00421 162 219 3.3E-22 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS02205 8796d2e2f5a42f25ea8422daaa4428a6 225 SMART SM00448 1 109 1.2E-21 T 10-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CpPa04_RS02205 8796d2e2f5a42f25ea8422daaa4428a6 225 Pfam PF00196 Bacterial regulatory proteins, luxR family 163 219 6.6E-18 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS02205 8796d2e2f5a42f25ea8422daaa4428a6 225 SUPERFAMILY SSF46894 157 224 1.12E-21 T 10-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CpPa04_RS01230 84eb5aec470ebb949a7705acf5166dde 469 Gene3D G3DSA:3.50.50.60 140 333 1.6E-53 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS01230 84eb5aec470ebb949a7705acf5166dde 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 1.1E-65 T 10-03-2017 CpPa04_RS01230 84eb5aec470ebb949a7705acf5166dde 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 314 1.1E-65 T 10-03-2017 CpPa04_RS01230 84eb5aec470ebb949a7705acf5166dde 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 1.1E-65 T 10-03-2017 CpPa04_RS01230 84eb5aec470ebb949a7705acf5166dde 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.1E-65 T 10-03-2017 CpPa04_RS01230 84eb5aec470ebb949a7705acf5166dde 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 411 426 1.1E-65 T 10-03-2017 CpPa04_RS01230 84eb5aec470ebb949a7705acf5166dde 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 1.1E-65 T 10-03-2017 CpPa04_RS01230 84eb5aec470ebb949a7705acf5166dde 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 433 453 1.1E-65 T 10-03-2017 CpPa04_RS01230 84eb5aec470ebb949a7705acf5166dde 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.1E-65 T 10-03-2017 CpPa04_RS01230 84eb5aec470ebb949a7705acf5166dde 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 1.1E-65 T 10-03-2017 CpPa04_RS01230 84eb5aec470ebb949a7705acf5166dde 469 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 459 7.1E-33 T 10-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CpPa04_RS01230 84eb5aec470ebb949a7705acf5166dde 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.8E-36 T 10-03-2017 CpPa04_RS01230 84eb5aec470ebb949a7705acf5166dde 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 1.8E-36 T 10-03-2017 CpPa04_RS01230 84eb5aec470ebb949a7705acf5166dde 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 1.8E-36 T 10-03-2017 CpPa04_RS01230 84eb5aec470ebb949a7705acf5166dde 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 1.8E-36 T 10-03-2017 CpPa04_RS01230 84eb5aec470ebb949a7705acf5166dde 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 292 314 1.8E-36 T 10-03-2017 CpPa04_RS01230 84eb5aec470ebb949a7705acf5166dde 469 Gene3D G3DSA:3.50.50.60 3 139 2.7E-38 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS01230 84eb5aec470ebb949a7705acf5166dde 469 Gene3D G3DSA:3.30.390.30 334 467 9.5E-42 T 10-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CpPa04_RS01230 84eb5aec470ebb949a7705acf5166dde 469 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 468 1.6E-172 T 10-03-2017 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CpPa04_RS01230 84eb5aec470ebb949a7705acf5166dde 469 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 10-03-2017 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CpPa04_RS01230 84eb5aec470ebb949a7705acf5166dde 469 SUPERFAMILY SSF55424 345 467 6.36E-36 T 10-03-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CpPa04_RS01230 84eb5aec470ebb949a7705acf5166dde 469 PIRSF PIRSF000350 1 466 9.6E-86 T 10-03-2017 CpPa04_RS01230 84eb5aec470ebb949a7705acf5166dde 469 SUPERFAMILY SSF51905 2 336 1.24E-65 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS01230 84eb5aec470ebb949a7705acf5166dde 469 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 327 5.4E-70 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS03305 6b7aa5ea98fceb63d71a5e7984aac2e2 312 Gene3D G3DSA:1.10.3720.10 62 269 1.7E-45 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS03305 6b7aa5ea98fceb63d71a5e7984aac2e2 312 SUPERFAMILY SSF161098 64 254 4.19E-40 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS03305 6b7aa5ea98fceb63d71a5e7984aac2e2 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 269 3.2E-24 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS03305 6b7aa5ea98fceb63d71a5e7984aac2e2 312 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 66 163 1.4E-17 T 10-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CpPa04_RS03165 2b779593aabedc1829e5d8b05a955621 510 SUPERFAMILY SSF53850 45 501 1.91E-85 T 10-03-2017 CpPa04_RS03165 2b779593aabedc1829e5d8b05a955621 510 Gene3D G3DSA:3.10.105.10 294 474 1.6E-35 T 10-03-2017 CpPa04_RS03165 2b779593aabedc1829e5d8b05a955621 510 Gene3D G3DSA:3.90.76.10 71 196 4.5E-22 T 10-03-2017 CpPa04_RS03165 2b779593aabedc1829e5d8b05a955621 510 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 93 415 5.9E-62 T 10-03-2017 IPR000914 Solute-binding protein family 5 domain CpPa04_RS03165 2b779593aabedc1829e5d8b05a955621 510 PIRSF PIRSF002741 6 505 7.1E-59 T 10-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CpPa04_RS03165 2b779593aabedc1829e5d8b05a955621 510 Gene3D G3DSA:3.40.190.10 197 293 4.1E-29 T 10-03-2017 CpPa04_RS04060 725c7522b5631b084b91ef5ece7de21b 1231 ProSitePatterns PS00211 ABC transporters family signature. 466 480 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS04060 725c7522b5631b084b91ef5ece7de21b 1231 SUPERFAMILY SSF90123 667 974 2.35E-67 T 10-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CpPa04_RS04060 725c7522b5631b084b91ef5ece7de21b 1231 SMART SM00382 1015 1201 5.5E-16 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS04060 725c7522b5631b084b91ef5ece7de21b 1231 SMART SM00382 355 540 3.1E-17 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS04060 725c7522b5631b084b91ef5ece7de21b 1231 Pfam PF00005 ABC transporter 1006 1155 6.6E-30 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS04060 725c7522b5631b084b91ef5ece7de21b 1231 Pfam PF00005 ABC transporter 346 494 1.9E-29 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS04060 725c7522b5631b084b91ef5ece7de21b 1231 Gene3D G3DSA:1.20.1560.10 668 974 4.8E-73 T 10-03-2017 CpPa04_RS04060 725c7522b5631b084b91ef5ece7de21b 1231 Gene3D G3DSA:1.20.1560.10 9 321 9.2E-58 T 10-03-2017 CpPa04_RS04060 725c7522b5631b084b91ef5ece7de21b 1231 SUPERFAMILY SSF52540 331 554 9.69E-70 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04060 725c7522b5631b084b91ef5ece7de21b 1231 Pfam PF00664 ABC transporter transmembrane region 676 941 5.2E-36 T 10-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CpPa04_RS04060 725c7522b5631b084b91ef5ece7de21b 1231 Pfam PF00664 ABC transporter transmembrane region 20 286 4.0E-32 T 10-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CpPa04_RS04060 725c7522b5631b084b91ef5ece7de21b 1231 Gene3D G3DSA:3.40.50.300 336 555 6.0E-66 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04060 725c7522b5631b084b91ef5ece7de21b 1231 Gene3D G3DSA:3.40.50.300 990 1213 2.8E-70 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04060 725c7522b5631b084b91ef5ece7de21b 1231 SUPERFAMILY SSF52540 985 1223 5.67E-78 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04060 725c7522b5631b084b91ef5ece7de21b 1231 SUPERFAMILY SSF90123 7 325 2.75E-60 T 10-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CpPa04_RS08015 b051133bddbc0e7bf35f53cd5c1c6434 530 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 362 515 1.1E-27 T 10-03-2017 IPR006512 YidE/YbjL duplication CpPa04_RS08015 b051133bddbc0e7bf35f53cd5c1c6434 530 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 20 161 4.3E-21 T 10-03-2017 IPR006512 YidE/YbjL duplication CpPa04_RS08015 b051133bddbc0e7bf35f53cd5c1c6434 530 SUPERFAMILY SSF116726 270 343 6.93E-12 T 10-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CpPa04_RS08015 b051133bddbc0e7bf35f53cd5c1c6434 530 Gene3D G3DSA:3.30.70.1450 273 343 1.3E-8 T 10-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CpPa04_RS08015 b051133bddbc0e7bf35f53cd5c1c6434 530 Gene3D G3DSA:3.30.70.1450 212 258 5.5E-4 T 10-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CpPa04_RS08015 b051133bddbc0e7bf35f53cd5c1c6434 530 SUPERFAMILY SSF116726 202 258 5.36E-5 T 10-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CpPa04_RS08015 b051133bddbc0e7bf35f53cd5c1c6434 530 Pfam PF06826 Predicted Permease Membrane Region 357 528 4.5E-27 T 10-03-2017 IPR006512 YidE/YbjL duplication CpPa04_RS08015 b051133bddbc0e7bf35f53cd5c1c6434 530 Pfam PF06826 Predicted Permease Membrane Region 16 172 4.0E-27 T 10-03-2017 IPR006512 YidE/YbjL duplication CpPa04_RS08015 b051133bddbc0e7bf35f53cd5c1c6434 530 Pfam PF02080 TrkA-C domain 275 343 7.8E-13 T 10-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CpPa04_RS01055 d8dc88efe06bff3bd24041ec149b1b00 227 Gene3D G3DSA:1.10.10.10 147 226 7.5E-29 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS01055 d8dc88efe06bff3bd24041ec149b1b00 227 PRINTS PR00103 cAMP-dependent protein kinase signature 49 63 1.5E-5 T 10-03-2017 CpPa04_RS01055 d8dc88efe06bff3bd24041ec149b1b00 227 PRINTS PR00103 cAMP-dependent protein kinase signature 91 102 1.5E-5 T 10-03-2017 CpPa04_RS01055 d8dc88efe06bff3bd24041ec149b1b00 227 PRINTS PR00103 cAMP-dependent protein kinase signature 79 88 1.5E-5 T 10-03-2017 CpPa04_RS01055 d8dc88efe06bff3bd24041ec149b1b00 227 PRINTS PR00103 cAMP-dependent protein kinase signature 34 48 1.5E-5 T 10-03-2017 CpPa04_RS01055 d8dc88efe06bff3bd24041ec149b1b00 227 Gene3D G3DSA:2.60.120.10 5 144 1.9E-36 T 10-03-2017 IPR014710 RmlC-like jelly roll fold CpPa04_RS01055 d8dc88efe06bff3bd24041ec149b1b00 227 SMART SM00100 13 134 2.6E-24 T 10-03-2017 IPR000595 Cyclic nucleotide-binding domain CpPa04_RS01055 d8dc88efe06bff3bd24041ec149b1b00 227 SUPERFAMILY SSF51206 6 145 1.44E-35 T 10-03-2017 IPR018490 Cyclic nucleotide-binding-like CpPa04_RS01055 d8dc88efe06bff3bd24041ec149b1b00 227 Pfam PF00027 Cyclic nucleotide-binding domain 32 118 1.5E-22 T 10-03-2017 IPR000595 Cyclic nucleotide-binding domain CpPa04_RS01055 d8dc88efe06bff3bd24041ec149b1b00 227 SUPERFAMILY SSF46785 148 226 1.85E-20 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS01055 d8dc88efe06bff3bd24041ec149b1b00 227 Pfam PF13545 Crp-like helix-turn-helix domain 151 224 2.9E-17 T 10-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CpPa04_RS01055 d8dc88efe06bff3bd24041ec149b1b00 227 SMART SM00419 170 218 1.0E-12 T 10-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CpPa04_RS06145 7896b1af289ebd91d26aece565e4eff6 250 Gene3D G3DSA:3.30.420.40 3 107 5.8E-40 T 10-03-2017 CpPa04_RS06145 7896b1af289ebd91d26aece565e4eff6 250 Gene3D G3DSA:3.30.420.40 108 247 4.3E-34 T 10-03-2017 CpPa04_RS06145 7896b1af289ebd91d26aece565e4eff6 250 Pfam PF00480 ROK family 7 163 7.6E-17 T 10-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CpPa04_RS06145 7896b1af289ebd91d26aece565e4eff6 250 SUPERFAMILY SSF53067 6 246 1.34E-32 T 10-03-2017 CpPa04_RS05750 2aa590dab548a89bf8e8b2a03028c9a3 452 Pfam PF01979 Amidohydrolase family 66 439 4.2E-23 T 10-03-2017 IPR006680 Amidohydrolase-related GO:0016787 CpPa04_RS05750 2aa590dab548a89bf8e8b2a03028c9a3 452 SUPERFAMILY SSF51338 386 446 1.54E-22 T 10-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CpPa04_RS05750 2aa590dab548a89bf8e8b2a03028c9a3 452 SUPERFAMILY SSF51338 30 69 1.54E-22 T 10-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CpPa04_RS05750 2aa590dab548a89bf8e8b2a03028c9a3 452 ProSitePatterns PS00483 Dihydroorotase signature 2. 320 331 - T 10-03-2017 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 CpPa04_RS05750 2aa590dab548a89bf8e8b2a03028c9a3 452 Gene3D G3DSA:2.30.40.10 33 83 1.9E-17 T 10-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CpPa04_RS05750 2aa590dab548a89bf8e8b2a03028c9a3 452 SUPERFAMILY SSF51556 70 385 1.51E-92 T 10-03-2017 IPR032466 Metal-dependent hydrolase CpPa04_RS05750 2aa590dab548a89bf8e8b2a03028c9a3 452 Gene3D G3DSA:3.20.20.140 84 426 5.8E-98 T 10-03-2017 CpPa04_RS05750 2aa590dab548a89bf8e8b2a03028c9a3 452 ProSitePatterns PS00482 Dihydroorotase signature 1. 73 81 - T 10-03-2017 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 CpPa04_RS05750 2aa590dab548a89bf8e8b2a03028c9a3 452 Hamap MF_00220_B Dihydroorotase [pyrC]. 20 444 42.115 T 10-03-2017 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 CpPa04_RS05750 2aa590dab548a89bf8e8b2a03028c9a3 452 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 35 442 5.2E-141 T 10-03-2017 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 CpPa04_RS03925 c73f0eb08d569668b7c8563b39f2ced8 364 Gene3D G3DSA:3.90.1150.10 242 363 1.2E-18 T 10-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CpPa04_RS03925 c73f0eb08d569668b7c8563b39f2ced8 364 TIGRFAM TIGR03539 DapC_actino: succinyldiaminopimelate transaminase 10 363 2.0E-170 T 10-03-2017 IPR019880 Succinyldiaminopimelate transaminase, DapC, actinobacteria CpPa04_RS03925 c73f0eb08d569668b7c8563b39f2ced8 364 Gene3D G3DSA:3.40.640.10 52 241 2.0E-37 T 10-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CpPa04_RS03925 c73f0eb08d569668b7c8563b39f2ced8 364 Pfam PF00155 Aminotransferase class I and II 32 360 8.8E-36 T 10-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CpPa04_RS03925 c73f0eb08d569668b7c8563b39f2ced8 364 SUPERFAMILY SSF53383 7 363 7.15E-69 T 10-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase CpPa04_RS00215 239791647fdaf2492a8a51a8ad2c8e23 332 Gene3D G3DSA:3.40.50.1980 185 331 4.6E-16 T 10-03-2017 CpPa04_RS00215 239791647fdaf2492a8a51a8ad2c8e23 332 Gene3D G3DSA:3.40.50.1980 56 184 8.6E-15 T 10-03-2017 CpPa04_RS00215 239791647fdaf2492a8a51a8ad2c8e23 332 Pfam PF01497 Periplasmic binding protein 60 303 1.5E-25 T 10-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CpPa04_RS00215 239791647fdaf2492a8a51a8ad2c8e23 332 SUPERFAMILY SSF53807 43 331 2.24E-37 T 10-03-2017 CpPa04_RS03690 1b4c8bb90e9c0b5a4319c578c3a2dbee 265 SUPERFAMILY SSF64005 33 259 1.96E-76 T 10-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CpPa04_RS03690 1b4c8bb90e9c0b5a4319c578c3a2dbee 265 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 210 227 - T 10-03-2017 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 CpPa04_RS03690 1b4c8bb90e9c0b5a4319c578c3a2dbee 265 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 34 265 37.046 T 10-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CpPa04_RS03690 1b4c8bb90e9c0b5a4319c578c3a2dbee 265 Pfam PF01255 Putative undecaprenyl diphosphate synthase 42 264 7.3E-75 T 10-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CpPa04_RS03690 1b4c8bb90e9c0b5a4319c578c3a2dbee 265 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 35 264 2.5E-70 T 10-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CpPa04_RS03690 1b4c8bb90e9c0b5a4319c578c3a2dbee 265 Gene3D G3DSA:3.40.1180.10 20 265 2.4E-89 T 10-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CpPa04_RS04010 1a34b864836e6c5948db7bb1014807cd 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 196 206 - T 10-03-2017 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CpPa04_RS04010 1a34b864836e6c5948db7bb1014807cd 405 SUPERFAMILY SSF51161 300 397 4.71E-17 T 10-03-2017 IPR011004 Trimeric LpxA-like CpPa04_RS04010 1a34b864836e6c5948db7bb1014807cd 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 98 106 - T 10-03-2017 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CpPa04_RS04010 1a34b864836e6c5948db7bb1014807cd 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 13 32 - T 10-03-2017 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CpPa04_RS04010 1a34b864836e6c5948db7bb1014807cd 405 Pfam PF00483 Nucleotidyl transferase 9 276 3.5E-68 T 10-03-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CpPa04_RS04010 1a34b864836e6c5948db7bb1014807cd 405 SUPERFAMILY SSF53448 343 360 1.24E-68 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS04010 1a34b864836e6c5948db7bb1014807cd 405 SUPERFAMILY SSF53448 5 280 1.24E-68 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS04010 1a34b864836e6c5948db7bb1014807cd 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 7 379 1.0E-140 T 10-03-2017 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CpPa04_RS04010 1a34b864836e6c5948db7bb1014807cd 405 Gene3D G3DSA:3.90.550.10 326 369 1.2E-76 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS04010 1a34b864836e6c5948db7bb1014807cd 405 Gene3D G3DSA:3.90.550.10 8 287 1.2E-76 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS04010 1a34b864836e6c5948db7bb1014807cd 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 4 405 48.066 T 10-03-2017 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CpPa04_RS07105 79f5b26612232adcd0e99602203581aa 503 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 9 496 30.679 T 10-03-2017 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CpPa04_RS07105 79f5b26612232adcd0e99602203581aa 503 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 28 496 3.4E-138 T 10-03-2017 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CpPa04_RS07105 79f5b26612232adcd0e99602203581aa 503 SUPERFAMILY SSF53244 341 498 1.31E-44 T 10-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CpPa04_RS07105 79f5b26612232adcd0e99602203581aa 503 Pfam PF02875 Mur ligase family, glutamate ligase domain 341 424 2.9E-20 T 10-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CpPa04_RS07105 79f5b26612232adcd0e99602203581aa 503 SUPERFAMILY SSF53623 108 337 9.68E-70 T 10-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CpPa04_RS07105 79f5b26612232adcd0e99602203581aa 503 Pfam PF08245 Mur ligase middle domain 117 322 1.7E-45 T 10-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CpPa04_RS07105 79f5b26612232adcd0e99602203581aa 503 SUPERFAMILY SSF63418 9 108 5.49E-12 T 10-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CpPa04_RS07105 79f5b26612232adcd0e99602203581aa 503 Gene3D G3DSA:3.40.1190.10 108 344 2.8E-77 T 10-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CpPa04_RS07105 79f5b26612232adcd0e99602203581aa 503 Gene3D G3DSA:3.40.1390.10 15 106 1.1E-11 T 10-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CpPa04_RS07105 79f5b26612232adcd0e99602203581aa 503 Gene3D G3DSA:3.90.190.20 345 490 1.6E-49 T 10-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CpPa04_RS06270 995c6f199a4a02fd06f35a1be7525f56 326 PRINTS PR00990 Ribokinase signature 231 242 2.0E-5 T 10-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 CpPa04_RS06270 995c6f199a4a02fd06f35a1be7525f56 326 PRINTS PR00990 Ribokinase signature 32 51 2.0E-5 T 10-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 CpPa04_RS06270 995c6f199a4a02fd06f35a1be7525f56 326 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 260 273 - T 10-03-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CpPa04_RS06270 995c6f199a4a02fd06f35a1be7525f56 326 PIRSF PIRSF000535 1 319 1.4E-60 T 10-03-2017 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CpPa04_RS06270 995c6f199a4a02fd06f35a1be7525f56 326 Gene3D G3DSA:3.40.1190.20 36 311 3.3E-65 T 10-03-2017 IPR029056 Ribokinase-like CpPa04_RS06270 995c6f199a4a02fd06f35a1be7525f56 326 SUPERFAMILY SSF53613 2 313 5.77E-54 T 10-03-2017 IPR029056 Ribokinase-like CpPa04_RS06270 995c6f199a4a02fd06f35a1be7525f56 326 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 312 2.9E-87 T 10-03-2017 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CpPa04_RS06270 995c6f199a4a02fd06f35a1be7525f56 326 Pfam PF00294 pfkB family carbohydrate kinase 23 307 1.0E-36 T 10-03-2017 IPR011611 Carbohydrate kinase PfkB CpPa04_RS00340 75d19159f7b878ebda9ac2d9a3572a5f 245 Pfam PF01988 VIT family 28 238 6.9E-51 T 10-03-2017 IPR008217 Ccc1 family CpPa04_RS10395 4cf628bdf1212e15262ba548591b6a4c 500 SUPERFAMILY SSF53613 237 491 4.64E-42 T 10-03-2017 IPR029056 Ribokinase-like CpPa04_RS10395 4cf628bdf1212e15262ba548591b6a4c 500 Gene3D G3DSA:3.40.50.10260 1 202 8.4E-45 T 10-03-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CpPa04_RS10395 4cf628bdf1212e15262ba548591b6a4c 500 Gene3D G3DSA:3.40.1190.20 238 493 1.1E-58 T 10-03-2017 IPR029056 Ribokinase-like CpPa04_RS10395 4cf628bdf1212e15262ba548591b6a4c 500 Pfam PF01256 Carbohydrate kinase 251 473 2.5E-38 T 10-03-2017 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CpPa04_RS10395 4cf628bdf1212e15262ba548591b6a4c 500 SUPERFAMILY SSF64153 1 205 1.7E-42 T 10-03-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CpPa04_RS10395 4cf628bdf1212e15262ba548591b6a4c 500 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 226 496 16.034 T 10-03-2017 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CpPa04_RS10395 4cf628bdf1212e15262ba548591b6a4c 500 PIRSF PIRSF017184 1 499 6.0E-71 T 10-03-2017 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 CpPa04_RS10395 4cf628bdf1212e15262ba548591b6a4c 500 Pfam PF03853 YjeF-related protein N-terminus 23 174 2.0E-33 T 10-03-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CpPa04_RS08085 eddeae06bcb6275b362de2b1ed720d0d 428 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 422 51.606 T 10-03-2017 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CpPa04_RS08085 eddeae06bcb6275b362de2b1ed720d0d 428 SMART SM01086 324 418 3.9E-31 T 10-03-2017 IPR019489 Clp ATPase, C-terminal CpPa04_RS08085 eddeae06bcb6275b362de2b1ed720d0d 428 SMART SM00994 10 49 4.5E-22 T 10-03-2017 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CpPa04_RS08085 eddeae06bcb6275b362de2b1ed720d0d 428 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 324 394 4.6E-14 T 10-03-2017 IPR019489 Clp ATPase, C-terminal CpPa04_RS08085 eddeae06bcb6275b362de2b1ed720d0d 428 SUPERFAMILY SSF52540 64 403 2.63E-71 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08085 eddeae06bcb6275b362de2b1ed720d0d 428 Pfam PF06689 ClpX C4-type zinc finger 11 48 1.0E-19 T 10-03-2017 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CpPa04_RS08085 eddeae06bcb6275b362de2b1ed720d0d 428 Pfam PF07724 AAA domain (Cdc48 subfamily) 120 318 7.0E-49 T 10-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 CpPa04_RS08085 eddeae06bcb6275b362de2b1ed720d0d 428 SMART SM00382 120 273 2.2E-10 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS08085 eddeae06bcb6275b362de2b1ed720d0d 428 Gene3D G3DSA:1.10.8.60 323 422 1.5E-33 T 10-03-2017 CpPa04_RS08085 eddeae06bcb6275b362de2b1ed720d0d 428 Gene3D G3DSA:3.40.50.300 301 318 1.1E-47 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08085 eddeae06bcb6275b362de2b1ed720d0d 428 Gene3D G3DSA:3.40.50.300 67 262 1.1E-47 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08085 eddeae06bcb6275b362de2b1ed720d0d 428 SUPERFAMILY SSF57716 11 46 3.99E-11 T 10-03-2017 CpPa04_RS08085 eddeae06bcb6275b362de2b1ed720d0d 428 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 1 418 4.5E-194 T 10-03-2017 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CpPa04_RS05655 33403d8d908cfd07f52da39a424184ff 675 SUPERFAMILY SSF82771 18 101 6.02E-23 T 10-03-2017 IPR000305 GIY-YIG nuclease superfamily CpPa04_RS05655 33403d8d908cfd07f52da39a424184ff 675 Pfam PF01541 GIY-YIG catalytic domain 19 92 2.7E-10 T 10-03-2017 IPR000305 GIY-YIG nuclease superfamily CpPa04_RS05655 33403d8d908cfd07f52da39a424184ff 675 Gene3D G3DSA:1.10.150.20 619 673 3.7E-21 T 10-03-2017 CpPa04_RS05655 33403d8d908cfd07f52da39a424184ff 675 Gene3D G3DSA:3.40.1440.10 17 95 1.6E-11 T 10-03-2017 IPR027299 GIY-YIG domain CpPa04_RS05655 33403d8d908cfd07f52da39a424184ff 675 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 428 606 1.0E-49 T 10-03-2017 IPR001162 UvrC family homology region CpPa04_RS05655 33403d8d908cfd07f52da39a424184ff 675 Pfam PF12826 Helix-hairpin-helix motif 625 673 1.8E-9 T 10-03-2017 CpPa04_RS05655 33403d8d908cfd07f52da39a424184ff 675 SUPERFAMILY SSF47781 561 673 4.13E-24 T 10-03-2017 IPR010994 RuvA domain 2-like CpPa04_RS05655 33403d8d908cfd07f52da39a424184ff 675 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 671 29.884 T 10-03-2017 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CpPa04_RS05655 33403d8d908cfd07f52da39a424184ff 675 SMART SM00465 17 99 4.7E-22 T 10-03-2017 IPR000305 GIY-YIG nuclease superfamily CpPa04_RS05655 33403d8d908cfd07f52da39a424184ff 675 SUPERFAMILY SSF46600 194 247 1.44E-13 T 10-03-2017 IPR001943 UVR domain GO:0005515 CpPa04_RS05655 33403d8d908cfd07f52da39a424184ff 675 SMART SM00278 620 639 370.0 T 10-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CpPa04_RS05655 33403d8d908cfd07f52da39a424184ff 675 SMART SM00278 652 671 0.2 T 10-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CpPa04_RS05655 33403d8d908cfd07f52da39a424184ff 675 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 13 316 9.7E-88 T 10-03-2017 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CpPa04_RS05655 33403d8d908cfd07f52da39a424184ff 675 Pfam PF02151 UvrB/uvrC motif 210 242 9.9E-9 T 10-03-2017 IPR001943 UVR domain GO:0005515 CpPa04_RS05655 33403d8d908cfd07f52da39a424184ff 675 Gene3D G3DSA:4.10.860.10 187 248 7.8E-19 T 10-03-2017 IPR001943 UVR domain GO:0005515 CpPa04_RS04430 2e6f7ecdd8f3ec05ea5d5a1bdc0983a7 494 Pfam PF01425 Amidase 32 482 3.0E-155 T 10-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CpPa04_RS04430 2e6f7ecdd8f3ec05ea5d5a1bdc0983a7 494 ProSitePatterns PS00571 Amidases signature. 161 192 - T 10-03-2017 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 CpPa04_RS04430 2e6f7ecdd8f3ec05ea5d5a1bdc0983a7 494 SUPERFAMILY SSF75304 8 491 1.05E-156 T 10-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CpPa04_RS04430 2e6f7ecdd8f3ec05ea5d5a1bdc0983a7 494 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 20 491 3.8E-182 T 10-03-2017 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CpPa04_RS04430 2e6f7ecdd8f3ec05ea5d5a1bdc0983a7 494 Gene3D G3DSA:3.90.1300.10 10 491 2.5E-169 T 10-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CpPa04_RS04430 2e6f7ecdd8f3ec05ea5d5a1bdc0983a7 494 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 19 494 90.623 T 10-03-2017 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CpPa04_RS03470 0fe83ca418f70b319eebc4394b36ed75 319 Gene3D G3DSA:3.30.70.890 188 306 5.0E-27 T 10-03-2017 IPR013750 GHMP kinase, C-terminal domain CpPa04_RS03470 0fe83ca418f70b319eebc4394b36ed75 319 Gene3D G3DSA:3.30.230.10 15 182 8.5E-43 T 10-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CpPa04_RS03470 0fe83ca418f70b319eebc4394b36ed75 319 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 14 304 27.514 T 10-03-2017 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CpPa04_RS03470 0fe83ca418f70b319eebc4394b36ed75 319 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 13 293 1.2E-41 T 10-03-2017 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CpPa04_RS03470 0fe83ca418f70b319eebc4394b36ed75 319 Pfam PF08544 GHMP kinases C terminal 235 296 2.8E-8 T 10-03-2017 IPR013750 GHMP kinase, C-terminal domain CpPa04_RS03470 0fe83ca418f70b319eebc4394b36ed75 319 SUPERFAMILY SSF55060 188 299 8.63E-24 T 10-03-2017 IPR013750 GHMP kinase, C-terminal domain CpPa04_RS03470 0fe83ca418f70b319eebc4394b36ed75 319 PIRSF PIRSF010376 12 317 4.0E-69 T 10-03-2017 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CpPa04_RS03470 0fe83ca418f70b319eebc4394b36ed75 319 SUPERFAMILY SSF54211 13 182 1.82E-29 T 10-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CpPa04_RS05640 07422b3826119e04b8ffc517875b9e69 329 Pfam PF14527 WhiA LAGLIDADG-like domain 129 220 6.4E-20 T 10-03-2017 CpPa04_RS05640 07422b3826119e04b8ffc517875b9e69 329 Pfam PF02650 WhiA C-terminal HTH domain 224 305 2.4E-19 T 10-03-2017 IPR023054 Sporulation regulator WhiA, C-terminal CpPa04_RS05640 07422b3826119e04b8ffc517875b9e69 329 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 4 308 27.548 T 10-03-2017 IPR003802 Sporulation regulator WhiA GO:0043937 CpPa04_RS05640 07422b3826119e04b8ffc517875b9e69 329 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 7 306 3.0E-91 T 10-03-2017 CpPa04_RS05640 07422b3826119e04b8ffc517875b9e69 329 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 21 106 6.4E-15 T 10-03-2017 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain CpPa04_RS06770 e734889dcc6fea3ddeb0f933db3736f0 1152 Pfam PF06470 SMC proteins Flexible Hinge Domain 510 613 1.9E-5 T 10-03-2017 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 CpPa04_RS06770 e734889dcc6fea3ddeb0f933db3736f0 1152 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1150 20.639 T 10-03-2017 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 CpPa04_RS06770 e734889dcc6fea3ddeb0f933db3736f0 1152 PIRSF PIRSF005719 1 1152 5.0E-231 T 10-03-2017 IPR024704 Structural maintenance of chromosomes protein CpPa04_RS06770 e734889dcc6fea3ddeb0f933db3736f0 1152 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 1140 1.7E-71 T 10-03-2017 IPR003395 RecF/RecN/SMC, N-terminal CpPa04_RS06770 e734889dcc6fea3ddeb0f933db3736f0 1152 SUPERFAMILY SSF52540 2 207 6.22E-66 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06770 e734889dcc6fea3ddeb0f933db3736f0 1152 SUPERFAMILY SSF52540 950 1143 6.22E-66 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06770 e734889dcc6fea3ddeb0f933db3736f0 1152 SUPERFAMILY SSF75553 462 645 1.44E-9 T 10-03-2017 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 CpPa04_RS06770 e734889dcc6fea3ddeb0f933db3736f0 1152 Gene3D G3DSA:3.40.50.300 997 1146 1.6E-87 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06770 e734889dcc6fea3ddeb0f933db3736f0 1152 Gene3D G3DSA:3.40.50.300 2 163 1.6E-87 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06770 e734889dcc6fea3ddeb0f933db3736f0 1152 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1148 4.0E-269 T 10-03-2017 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 CpPa04_RS01285 3eee547f7bb0355e324487890ac35dc6 83 Pfam PF01228 Glycine radical 14 64 5.3E-18 T 10-03-2017 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CpPa04_RS01285 3eee547f7bb0355e324487890ac35dc6 83 SUPERFAMILY SSF51998 10 81 5.49E-24 T 10-03-2017 CpPa04_RS01285 3eee547f7bb0355e324487890ac35dc6 83 Gene3D G3DSA:3.20.70.20 13 82 5.2E-30 T 10-03-2017 CpPa04_RS01285 3eee547f7bb0355e324487890ac35dc6 83 ProSitePatterns PS00850 Glycine radical domain signature. 53 61 - T 10-03-2017 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CpPa04_RS03250 91b50b5831765dc21c79a87d173ce3f7 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 2.0E-53 T 10-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS03250 91b50b5831765dc21c79a87d173ce3f7 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 463 481 2.0E-53 T 10-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS03250 91b50b5831765dc21c79a87d173ce3f7 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 148 167 2.0E-53 T 10-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS03250 91b50b5831765dc21c79a87d173ce3f7 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 481 495 2.0E-53 T 10-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS03250 91b50b5831765dc21c79a87d173ce3f7 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 2.0E-53 T 10-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS03250 91b50b5831765dc21c79a87d173ce3f7 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 495 508 2.0E-53 T 10-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS03250 91b50b5831765dc21c79a87d173ce3f7 547 Pfam PF00342 Phosphoglucose isomerase 50 539 7.6E-208 T 10-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS03250 91b50b5831765dc21c79a87d173ce3f7 547 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 10-03-2017 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS03250 91b50b5831765dc21c79a87d173ce3f7 547 Gene3D G3DSA:3.40.50.10490 8 96 4.9E-135 T 10-03-2017 CpPa04_RS03250 91b50b5831765dc21c79a87d173ce3f7 547 Gene3D G3DSA:3.40.50.10490 293 504 4.9E-135 T 10-03-2017 CpPa04_RS03250 91b50b5831765dc21c79a87d173ce3f7 547 Gene3D G3DSA:3.40.50.10490 97 288 1.4E-81 T 10-03-2017 CpPa04_RS03250 91b50b5831765dc21c79a87d173ce3f7 547 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 495 512 - T 10-03-2017 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS03250 91b50b5831765dc21c79a87d173ce3f7 547 Gene3D G3DSA:1.10.1390.10 505 546 1.1E-18 T 10-03-2017 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS03250 91b50b5831765dc21c79a87d173ce3f7 547 SUPERFAMILY SSF53697 4 546 6.43E-203 T 10-03-2017 CpPa04_RS03250 91b50b5831765dc21c79a87d173ce3f7 547 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 44 522 40.505 T 10-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS06895 0ea715442befc6256fd23659149460d5 210 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 209 32.554 T 10-03-2017 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CpPa04_RS06895 0ea715442befc6256fd23659149460d5 210 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 208 2.5E-64 T 10-03-2017 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CpPa04_RS06895 0ea715442befc6256fd23659149460d5 210 Gene3D G3DSA:3.40.50.880 1 208 4.6E-76 T 10-03-2017 IPR029062 Class I glutamine amidotransferase-like CpPa04_RS06895 0ea715442befc6256fd23659149460d5 210 PIRSF PIRSF000495 2 210 1.1E-63 T 10-03-2017 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CpPa04_RS06895 0ea715442befc6256fd23659149460d5 210 Pfam PF00117 Glutamine amidotransferase class-I 6 207 1.1E-21 T 10-03-2017 IPR017926 Glutamine amidotransferase CpPa04_RS06895 0ea715442befc6256fd23659149460d5 210 SUPERFAMILY SSF52317 1 208 1.28E-56 T 10-03-2017 IPR029062 Class I glutamine amidotransferase-like CpPa04_RS07065 7f5e8d8a742d3f6f25e62dab19eb68a6 409 SMART SM00864 10 202 3.5E-109 T 10-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CpPa04_RS07065 7f5e8d8a742d3f6f25e62dab19eb68a6 409 PRINTS PR00423 Cell division protein FtsZ signature 186 208 3.3E-50 T 10-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CpPa04_RS07065 7f5e8d8a742d3f6f25e62dab19eb68a6 409 PRINTS PR00423 Cell division protein FtsZ signature 123 144 3.3E-50 T 10-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CpPa04_RS07065 7f5e8d8a742d3f6f25e62dab19eb68a6 409 PRINTS PR00423 Cell division protein FtsZ signature 95 115 3.3E-50 T 10-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CpPa04_RS07065 7f5e8d8a742d3f6f25e62dab19eb68a6 409 PRINTS PR00423 Cell division protein FtsZ signature 209 230 3.3E-50 T 10-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CpPa04_RS07065 7f5e8d8a742d3f6f25e62dab19eb68a6 409 SUPERFAMILY SSF52490 9 205 1.27E-67 T 10-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CpPa04_RS07065 7f5e8d8a742d3f6f25e62dab19eb68a6 409 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 6 372 38.33 T 10-03-2017 IPR000158 Cell division protein FtsZ GO:0005525 CpPa04_RS07065 7f5e8d8a742d3f6f25e62dab19eb68a6 409 Pfam PF12327 FtsZ family, C-terminal domain 219 313 5.2E-35 T 10-03-2017 IPR024757 Cell division protein FtsZ, C-terminal CpPa04_RS07065 7f5e8d8a742d3f6f25e62dab19eb68a6 409 ProSitePatterns PS01135 FtsZ protein signature 2. 94 115 - T 10-03-2017 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CpPa04_RS07065 7f5e8d8a742d3f6f25e62dab19eb68a6 409 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 6 319 1.5E-127 T 10-03-2017 IPR000158 Cell division protein FtsZ GO:0005525 CpPa04_RS07065 7f5e8d8a742d3f6f25e62dab19eb68a6 409 Gene3D G3DSA:3.40.50.1440 11 211 5.3E-91 T 10-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CpPa04_RS07065 7f5e8d8a742d3f6f25e62dab19eb68a6 409 SUPERFAMILY SSF55307 201 314 4.58E-43 T 10-03-2017 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 CpPa04_RS07065 7f5e8d8a742d3f6f25e62dab19eb68a6 409 Gene3D G3DSA:3.30.1330.20 212 315 1.7E-47 T 10-03-2017 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 CpPa04_RS07065 7f5e8d8a742d3f6f25e62dab19eb68a6 409 ProSitePatterns PS01134 FtsZ protein signature 1. 41 75 - T 10-03-2017 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CpPa04_RS07065 7f5e8d8a742d3f6f25e62dab19eb68a6 409 SMART SM00865 204 321 1.4E-54 T 10-03-2017 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 CpPa04_RS07065 7f5e8d8a742d3f6f25e62dab19eb68a6 409 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 11 169 6.7E-41 T 10-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CpPa04_RS09325 48ef2a4c4153ba03055f180afd5f821f 749 SUPERFAMILY SSF56112 98 375 2.37E-46 T 10-03-2017 IPR011009 Protein kinase-like domain CpPa04_RS09325 48ef2a4c4153ba03055f180afd5f821f 749 Pfam PF16918 Protein kinase G tetratricopeptide repeat 376 747 1.5E-101 T 10-03-2017 IPR031636 Protein kinase G, tetratricopeptide repeat containing domain KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 CpPa04_RS09325 48ef2a4c4153ba03055f180afd5f821f 749 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 235 247 - T 10-03-2017 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 CpPa04_RS09325 48ef2a4c4153ba03055f180afd5f821f 749 Pfam PF00069 Protein kinase domain 111 307 9.7E-28 T 10-03-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CpPa04_RS09325 48ef2a4c4153ba03055f180afd5f821f 749 SMART SM00220 111 358 1.9E-28 T 10-03-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CpPa04_RS09325 48ef2a4c4153ba03055f180afd5f821f 749 Gene3D G3DSA:3.30.200.20 101 178 2.3E-13 T 10-03-2017 CpPa04_RS09325 48ef2a4c4153ba03055f180afd5f821f 749 Gene3D G3DSA:1.10.510.10 179 354 6.5E-28 T 10-03-2017 CpPa04_RS09325 48ef2a4c4153ba03055f180afd5f821f 749 Gene3D G3DSA:1.25.40.10 586 647 1.9E-4 T 10-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CpPa04_RS03330 ba14c840bd5d42690943b8bc63536a4b 101 SUPERFAMILY SSF57716 2 101 4.06E-34 T 10-03-2017 CpPa04_RS03330 ba14c840bd5d42690943b8bc63536a4b 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 9.8E-23 T 10-03-2017 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS03330 ba14c840bd5d42690943b8bc63536a4b 101 Gene3D G3DSA:4.10.830.10 41 101 2.1E-27 T 10-03-2017 CpPa04_RS03330 ba14c840bd5d42690943b8bc63536a4b 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.747 T 10-03-2017 IPR023036 Ribosomal protein S14, bacterial/plastid CpPa04_RS09175 8e0e4969e4ee936bacf031fa0473f745 146 SUPERFAMILY SSF46785 9 143 3.44E-26 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS09175 8e0e4969e4ee936bacf031fa0473f745 146 SMART SM00347 30 130 7.6E-15 T 10-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CpPa04_RS09175 8e0e4969e4ee936bacf031fa0473f745 146 Pfam PF13463 Winged helix DNA-binding domain 38 103 5.3E-10 T 10-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CpPa04_RS09175 8e0e4969e4ee936bacf031fa0473f745 146 Gene3D G3DSA:1.10.10.10 11 143 7.6E-30 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS09175 8e0e4969e4ee936bacf031fa0473f745 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 4.1E-7 T 10-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CpPa04_RS09175 8e0e4969e4ee936bacf031fa0473f745 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 4.1E-7 T 10-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CpPa04_RS09175 8e0e4969e4ee936bacf031fa0473f745 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 4.1E-7 T 10-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CpPa04_RS02760 869ca6498cda7012aa9ba1037f106794 683 Gene3D G3DSA:3.40.50.300 281 394 3.1E-56 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02760 869ca6498cda7012aa9ba1037f106794 683 Gene3D G3DSA:3.40.50.300 483 570 3.1E-56 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02760 869ca6498cda7012aa9ba1037f106794 683 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 72 2.4E-20 T 10-03-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CpPa04_RS02760 869ca6498cda7012aa9ba1037f106794 683 Pfam PF00580 UvrD/REP helicase N-terminal domain 162 270 1.7E-22 T 10-03-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CpPa04_RS02760 869ca6498cda7012aa9ba1037f106794 683 Gene3D G3DSA:1.10.150.80 613 682 7.8E-18 T 10-03-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 CpPa04_RS02760 869ca6498cda7012aa9ba1037f106794 683 SMART SM00341 609 682 8.8E-10 T 10-03-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 CpPa04_RS02760 869ca6498cda7012aa9ba1037f106794 683 Pfam PF13361 UvrD-like helicase C-terminal domain 277 400 2.7E-15 T 10-03-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CpPa04_RS02760 869ca6498cda7012aa9ba1037f106794 683 Pfam PF13361 UvrD-like helicase C-terminal domain 436 548 2.0E-23 T 10-03-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CpPa04_RS02760 869ca6498cda7012aa9ba1037f106794 683 Pfam PF00570 HRDC domain 613 679 5.6E-23 T 10-03-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 CpPa04_RS02760 869ca6498cda7012aa9ba1037f106794 683 SUPERFAMILY SSF47819 606 682 1.0E-22 T 10-03-2017 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CpPa04_RS02760 869ca6498cda7012aa9ba1037f106794 683 SUPERFAMILY SSF52540 6 570 1.56E-122 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02760 869ca6498cda7012aa9ba1037f106794 683 Gene3D G3DSA:3.40.50.300 6 275 2.7E-62 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09810 f24a52e3c200532e8973c75087cf792e 435 PIRSF PIRSF500134 1 434 2.6E-135 T 10-03-2017 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346 CpPa04_RS09810 f24a52e3c200532e8973c75087cf792e 435 PIRSF PIRSF000124 1 430 2.6E-110 T 10-03-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CpPa04_RS09810 f24a52e3c200532e8973c75087cf792e 435 Gene3D G3DSA:1.20.5.100 206 230 2.9E-15 T 10-03-2017 CpPa04_RS09810 f24a52e3c200532e8973c75087cf792e 435 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 178 2.0E-52 T 10-03-2017 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CpPa04_RS09810 f24a52e3c200532e8973c75087cf792e 435 Gene3D G3DSA:3.40.50.720 1 205 4.8E-63 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS09810 f24a52e3c200532e8973c75087cf792e 435 SMART SM00984 319 420 2.7E-35 T 10-03-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CpPa04_RS09810 f24a52e3c200532e8973c75087cf792e 435 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 203 296 2.2E-28 T 10-03-2017 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CpPa04_RS09810 f24a52e3c200532e8973c75087cf792e 435 SUPERFAMILY SSF48179 202 299 5.44E-24 T 10-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CpPa04_RS09810 f24a52e3c200532e8973c75087cf792e 435 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 319 420 1.6E-25 T 10-03-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CpPa04_RS09810 f24a52e3c200532e8973c75087cf792e 435 SUPERFAMILY SSF52413 304 424 9.94E-31 T 10-03-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CpPa04_RS09810 f24a52e3c200532e8973c75087cf792e 435 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 416 1.7E-118 T 10-03-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CpPa04_RS09810 f24a52e3c200532e8973c75087cf792e 435 SUPERFAMILY SSF51735 1 188 2.37E-40 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS09810 f24a52e3c200532e8973c75087cf792e 435 Gene3D G3DSA:3.40.50.720 233 433 1.5E-54 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS07075 f933ea80bdfb9b81b563556d3ab4d541 485 Pfam PF02875 Mur ligase family, glutamate ligase domain 330 423 1.4E-18 T 10-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CpPa04_RS07075 f933ea80bdfb9b81b563556d3ab4d541 485 SUPERFAMILY SSF51984 12 102 1.83E-22 T 10-03-2017 CpPa04_RS07075 f933ea80bdfb9b81b563556d3ab4d541 485 Gene3D G3DSA:3.40.50.720 12 103 2.0E-31 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS07075 f933ea80bdfb9b81b563556d3ab4d541 485 Gene3D G3DSA:3.90.190.20 332 481 5.5E-48 T 10-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CpPa04_RS07075 f933ea80bdfb9b81b563556d3ab4d541 485 Gene3D G3DSA:3.40.1190.10 104 331 2.0E-72 T 10-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CpPa04_RS07075 f933ea80bdfb9b81b563556d3ab4d541 485 Pfam PF01225 Mur ligase family, catalytic domain 13 114 2.9E-25 T 10-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CpPa04_RS07075 f933ea80bdfb9b81b563556d3ab4d541 485 SUPERFAMILY SSF53623 101 328 3.66E-52 T 10-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CpPa04_RS07075 f933ea80bdfb9b81b563556d3ab4d541 485 SUPERFAMILY SSF53244 329 478 7.88E-41 T 10-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CpPa04_RS07075 f933ea80bdfb9b81b563556d3ab4d541 485 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 10 482 38.927 T 10-03-2017 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS07075 f933ea80bdfb9b81b563556d3ab4d541 485 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 13 476 1.2E-143 T 10-03-2017 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS07075 f933ea80bdfb9b81b563556d3ab4d541 485 Pfam PF08245 Mur ligase middle domain 120 309 7.3E-27 T 10-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CpPa04_RS02325 a6c867b5928388c4f6eeb0f5323cc155 280 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS02325 a6c867b5928388c4f6eeb0f5323cc155 280 SMART SM00382 31 217 6.6E-14 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS02325 a6c867b5928388c4f6eeb0f5323cc155 280 SUPERFAMILY SSF52540 4 237 2.76E-57 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02325 a6c867b5928388c4f6eeb0f5323cc155 280 Pfam PF00005 ABC transporter 22 169 1.6E-26 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS02325 a6c867b5928388c4f6eeb0f5323cc155 280 Gene3D G3DSA:3.40.50.300 3 236 8.6E-59 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05485 b80e91f42b5aa5661fb226bcbfc43cb3 939 Gene3D G3DSA:3.30.499.10 367 391 7.0E-62 T 10-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS05485 b80e91f42b5aa5661fb226bcbfc43cb3 939 Gene3D G3DSA:3.30.499.10 461 617 7.0E-62 T 10-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS05485 b80e91f42b5aa5661fb226bcbfc43cb3 939 PRINTS PR00415 Aconitase family signature 147 160 7.4E-39 T 10-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS05485 b80e91f42b5aa5661fb226bcbfc43cb3 939 PRINTS PR00415 Aconitase family signature 171 179 7.4E-39 T 10-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS05485 b80e91f42b5aa5661fb226bcbfc43cb3 939 PRINTS PR00415 Aconitase family signature 214 229 7.4E-39 T 10-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS05485 b80e91f42b5aa5661fb226bcbfc43cb3 939 PRINTS PR00415 Aconitase family signature 535 548 7.4E-39 T 10-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS05485 b80e91f42b5aa5661fb226bcbfc43cb3 939 PRINTS PR00415 Aconitase family signature 290 303 7.4E-39 T 10-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS05485 b80e91f42b5aa5661fb226bcbfc43cb3 939 PRINTS PR00415 Aconitase family signature 473 484 7.4E-39 T 10-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS05485 b80e91f42b5aa5661fb226bcbfc43cb3 939 PRINTS PR00415 Aconitase family signature 370 384 7.4E-39 T 10-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS05485 b80e91f42b5aa5661fb226bcbfc43cb3 939 PRINTS PR00415 Aconitase family signature 200 213 7.4E-39 T 10-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS05485 b80e91f42b5aa5661fb226bcbfc43cb3 939 PRINTS PR00415 Aconitase family signature 276 289 7.4E-39 T 10-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS05485 b80e91f42b5aa5661fb226bcbfc43cb3 939 SUPERFAMILY SSF52016 673 937 4.91E-79 T 10-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CpPa04_RS05485 b80e91f42b5aa5661fb226bcbfc43cb3 939 Pfam PF00330 Aconitase family (aconitate hydratase) 79 604 4.9E-176 T 10-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS05485 b80e91f42b5aa5661fb226bcbfc43cb3 939 Pfam PF00694 Aconitase C-terminal domain 733 862 9.9E-42 T 10-03-2017 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS05485 b80e91f42b5aa5661fb226bcbfc43cb3 939 Gene3D G3DSA:3.20.19.10 680 937 4.1E-76 T 10-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CpPa04_RS05485 b80e91f42b5aa5661fb226bcbfc43cb3 939 ProSitePatterns PS01244 Aconitase family signature 2. 535 548 - T 10-03-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CpPa04_RS05485 b80e91f42b5aa5661fb226bcbfc43cb3 939 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 24 937 0.0 T 10-03-2017 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 CpPa04_RS05485 b80e91f42b5aa5661fb226bcbfc43cb3 939 SUPERFAMILY SSF53732 10 404 1.14E-218 T 10-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS05485 b80e91f42b5aa5661fb226bcbfc43cb3 939 SUPERFAMILY SSF53732 443 669 1.14E-218 T 10-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS05485 b80e91f42b5aa5661fb226bcbfc43cb3 939 ProSitePatterns PS00450 Aconitase family signature 1. 469 485 - T 10-03-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CpPa04_RS05485 b80e91f42b5aa5661fb226bcbfc43cb3 939 Gene3D G3DSA:3.40.1060.10 247 365 2.2E-36 T 10-03-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS05485 b80e91f42b5aa5661fb226bcbfc43cb3 939 Gene3D G3DSA:3.30.499.10 33 246 6.5E-78 T 10-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS09645 97f713f7aa51e142b8fa399e87c04491 396 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 8 391 36.006 T 10-03-2017 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CpPa04_RS09645 97f713f7aa51e142b8fa399e87c04491 396 Pfam PF01556 DnaJ C terminal domain 153 364 1.4E-37 T 10-03-2017 IPR002939 Chaperone DnaJ, C-terminal CpPa04_RS09645 97f713f7aa51e142b8fa399e87c04491 396 SUPERFAMILY SSF57938 167 242 1.96E-16 T 10-03-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CpPa04_RS09645 97f713f7aa51e142b8fa399e87c04491 396 Pfam PF00226 DnaJ domain 11 73 5.7E-23 T 10-03-2017 IPR001623 DnaJ domain CpPa04_RS09645 97f713f7aa51e142b8fa399e87c04491 396 Gene3D G3DSA:2.60.260.20 289 365 4.2E-22 T 10-03-2017 CpPa04_RS09645 97f713f7aa51e142b8fa399e87c04491 396 Gene3D G3DSA:2.60.260.20 243 286 1.7E-17 T 10-03-2017 CpPa04_RS09645 97f713f7aa51e142b8fa399e87c04491 396 Gene3D G3DSA:2.60.260.20 140 174 1.7E-17 T 10-03-2017 CpPa04_RS09645 97f713f7aa51e142b8fa399e87c04491 396 SUPERFAMILY SSF49493 146 171 1.7E-15 T 10-03-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CpPa04_RS09645 97f713f7aa51e142b8fa399e87c04491 396 SUPERFAMILY SSF49493 245 294 1.7E-15 T 10-03-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CpPa04_RS09645 97f713f7aa51e142b8fa399e87c04491 396 Gene3D G3DSA:2.10.230.10 175 242 4.3E-19 T 10-03-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CpPa04_RS09645 97f713f7aa51e142b8fa399e87c04491 396 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 11 381 2.3E-115 T 10-03-2017 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CpPa04_RS09645 97f713f7aa51e142b8fa399e87c04491 396 SUPERFAMILY SSF46565 7 108 1.06E-26 T 10-03-2017 IPR001623 DnaJ domain CpPa04_RS09645 97f713f7aa51e142b8fa399e87c04491 396 SUPERFAMILY SSF49493 290 374 1.44E-21 T 10-03-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CpPa04_RS09645 97f713f7aa51e142b8fa399e87c04491 396 PRINTS PR00625 DnaJ domain signature 31 46 9.5E-21 T 10-03-2017 IPR001623 DnaJ domain CpPa04_RS09645 97f713f7aa51e142b8fa399e87c04491 396 PRINTS PR00625 DnaJ domain signature 13 31 9.5E-21 T 10-03-2017 IPR001623 DnaJ domain CpPa04_RS09645 97f713f7aa51e142b8fa399e87c04491 396 PRINTS PR00625 DnaJ domain signature 68 87 9.5E-21 T 10-03-2017 IPR001623 DnaJ domain CpPa04_RS09645 97f713f7aa51e142b8fa399e87c04491 396 PRINTS PR00625 DnaJ domain signature 48 68 9.5E-21 T 10-03-2017 IPR001623 DnaJ domain CpPa04_RS09645 97f713f7aa51e142b8fa399e87c04491 396 Gene3D G3DSA:1.10.287.110 3 96 1.8E-29 T 10-03-2017 IPR001623 DnaJ domain CpPa04_RS09645 97f713f7aa51e142b8fa399e87c04491 396 SMART SM00271 10 68 5.3E-23 T 10-03-2017 IPR001623 DnaJ domain CpPa04_RS09645 97f713f7aa51e142b8fa399e87c04491 396 Pfam PF00684 DnaJ central domain 180 239 3.7E-11 T 10-03-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CpPa04_RS07585 aca22ec2a21df42c62e59c24253b23f0 326 Pfam PF03186 CobD/Cbib protein 21 294 1.2E-88 T 10-03-2017 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CpPa04_RS07585 aca22ec2a21df42c62e59c24253b23f0 326 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 316 80.24 T 10-03-2017 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CpPa04_RS07585 aca22ec2a21df42c62e59c24253b23f0 326 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 23 310 1.3E-55 T 10-03-2017 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CpPa04_RS05395 86de659fed7aadfd4f011f70fc24e80a 333 Gene3D G3DSA:3.30.1180.20 185 331 7.9E-58 T 10-03-2017 CpPa04_RS05395 86de659fed7aadfd4f011f70fc24e80a 333 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 329 3.6E-155 T 10-03-2017 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 CpPa04_RS05395 86de659fed7aadfd4f011f70fc24e80a 333 SUPERFAMILY SSF82549 11 331 4.45E-124 T 10-03-2017 CpPa04_RS05395 86de659fed7aadfd4f011f70fc24e80a 333 Pfam PF02733 Dak1 domain 18 327 2.5E-130 T 10-03-2017 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CpPa04_RS05395 86de659fed7aadfd4f011f70fc24e80a 333 Gene3D G3DSA:3.40.50.10440 11 184 7.9E-71 T 10-03-2017 CpPa04_RS03390 df0a3e7ef24829c6ff1b6194082bbc09 202 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 18 195 1.8E-29 T 10-03-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase CpPa04_RS03390 df0a3e7ef24829c6ff1b6194082bbc09 202 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 18 195 2.1E-33 T 10-03-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase CpPa04_RS03390 df0a3e7ef24829c6ff1b6194082bbc09 202 SUPERFAMILY SSF100950 17 199 8.23E-38 T 10-03-2017 CpPa04_RS03390 df0a3e7ef24829c6ff1b6194082bbc09 202 Gene3D G3DSA:3.40.50.10420 17 198 4.9E-40 T 10-03-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CpPa04_RS03390 df0a3e7ef24829c6ff1b6194082bbc09 202 PIRSF PIRSF006806 13 198 1.7E-26 T 10-03-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase CpPa04_RS03790 5575c120715de1c45db0d4df32a1b06b 361 PIRSF PIRSF006641 1 361 2.8E-137 T 10-03-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 CpPa04_RS03790 5575c120715de1c45db0d4df32a1b06b 361 Pfam PF06071 Protein of unknown function (DUF933) 277 360 8.3E-38 T 10-03-2017 IPR013029 Domain of unknown function DUF933 CpPa04_RS03790 5575c120715de1c45db0d4df32a1b06b 361 Pfam PF01926 50S ribosome-binding GTPase 5 122 1.4E-22 T 10-03-2017 IPR006073 GTP binding domain GO:0005525 CpPa04_RS03790 5575c120715de1c45db0d4df32a1b06b 361 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.9E-33 T 10-03-2017 IPR006073 GTP binding domain GO:0005525 CpPa04_RS03790 5575c120715de1c45db0d4df32a1b06b 361 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.9E-33 T 10-03-2017 IPR006073 GTP binding domain GO:0005525 CpPa04_RS03790 5575c120715de1c45db0d4df32a1b06b 361 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 1.9E-33 T 10-03-2017 IPR006073 GTP binding domain GO:0005525 CpPa04_RS03790 5575c120715de1c45db0d4df32a1b06b 361 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 1.9E-33 T 10-03-2017 IPR006073 GTP binding domain GO:0005525 CpPa04_RS03790 5575c120715de1c45db0d4df32a1b06b 361 Gene3D G3DSA:3.10.20.30 263 361 8.3E-45 T 10-03-2017 IPR012675 Beta-grasp domain CpPa04_RS03790 5575c120715de1c45db0d4df32a1b06b 361 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 3 361 5.3E-127 T 10-03-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 CpPa04_RS03790 5575c120715de1c45db0d4df32a1b06b 361 Gene3D G3DSA:3.40.50.300 201 262 2.1E-42 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03790 5575c120715de1c45db0d4df32a1b06b 361 Gene3D G3DSA:3.40.50.300 4 130 2.1E-42 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03790 5575c120715de1c45db0d4df32a1b06b 361 SUPERFAMILY SSF81271 277 361 5.01E-33 T 10-03-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CpPa04_RS03790 5575c120715de1c45db0d4df32a1b06b 361 Gene3D G3DSA:1.10.150.300 131 200 2.9E-18 T 10-03-2017 IPR023192 TGS-like domain CpPa04_RS03790 5575c120715de1c45db0d4df32a1b06b 361 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 361 41.47 T 10-03-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 CpPa04_RS03790 5575c120715de1c45db0d4df32a1b06b 361 SUPERFAMILY SSF52540 3 299 7.6E-74 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06495 84a1195f281285fcfe8b01093045c4c5 961 Gene3D G3DSA:3.40.50.10050 761 841 1.3E-20 T 10-03-2017 IPR023115 Translation initiation factor IF- 2, domain 3 CpPa04_RS06495 84a1195f281285fcfe8b01093045c4c5 961 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 460 620 2.0E-30 T 10-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CpPa04_RS06495 84a1195f281285fcfe8b01093045c4c5 961 Gene3D G3DSA:3.40.50.300 452 621 3.6E-46 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06495 84a1195f281285fcfe8b01093045c4c5 961 Pfam PF00009 Elongation factor Tu GTP binding domain 462 621 1.1E-32 T 10-03-2017 CpPa04_RS06495 84a1195f281285fcfe8b01093045c4c5 961 Gene3D G3DSA:2.40.30.10 633 727 4.5E-21 T 10-03-2017 CpPa04_RS06495 84a1195f281285fcfe8b01093045c4c5 961 Gene3D G3DSA:2.40.30.10 863 960 3.3E-32 T 10-03-2017 CpPa04_RS06495 84a1195f281285fcfe8b01093045c4c5 961 SUPERFAMILY SSF52540 453 624 7.83E-48 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06495 84a1195f281285fcfe8b01093045c4c5 961 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 4 960 16.667 T 10-03-2017 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CpPa04_RS06495 84a1195f281285fcfe8b01093045c4c5 961 SMART SM00173 484 627 0.0019 T 10-03-2017 CpPa04_RS06495 84a1195f281285fcfe8b01093045c4c5 961 Pfam PF11987 Translation-initiation factor 2 755 852 4.7E-31 T 10-03-2017 IPR023115 Translation initiation factor IF- 2, domain 3 CpPa04_RS06495 84a1195f281285fcfe8b01093045c4c5 961 PRINTS PR00315 GTP-binding elongation factor signature 461 474 1.6E-9 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS06495 84a1195f281285fcfe8b01093045c4c5 961 PRINTS PR00315 GTP-binding elongation factor signature 565 574 1.6E-9 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS06495 84a1195f281285fcfe8b01093045c4c5 961 PRINTS PR00315 GTP-binding elongation factor signature 513 523 1.6E-9 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS06495 84a1195f281285fcfe8b01093045c4c5 961 PRINTS PR00315 GTP-binding elongation factor signature 529 540 1.6E-9 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS06495 84a1195f281285fcfe8b01093045c4c5 961 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 377 424 1.7E-8 T 10-03-2017 IPR006847 Translation initiation factor IF-2, N-terminal CpPa04_RS06495 84a1195f281285fcfe8b01093045c4c5 961 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 3 52 5.1E-14 T 10-03-2017 IPR006847 Translation initiation factor IF-2, N-terminal CpPa04_RS06495 84a1195f281285fcfe8b01093045c4c5 961 SUPERFAMILY SSF50447 635 718 1.94E-23 T 10-03-2017 IPR009000 Translation protein, beta-barrel domain CpPa04_RS06495 84a1195f281285fcfe8b01093045c4c5 961 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 371 960 1.2E-223 T 10-03-2017 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CpPa04_RS06495 84a1195f281285fcfe8b01093045c4c5 961 SUPERFAMILY SSF50447 863 960 4.99E-25 T 10-03-2017 IPR009000 Translation protein, beta-barrel domain CpPa04_RS06495 84a1195f281285fcfe8b01093045c4c5 961 SUPERFAMILY SSF52156 742 869 5.36E-34 T 10-03-2017 IPR023115 Translation initiation factor IF- 2, domain 3 CpPa04_RS00880 94ab703768f10cee1244efd9292dd3c6 421 Gene3D G3DSA:3.40.1160.10 3 244 1.9E-67 T 10-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase CpPa04_RS00880 94ab703768f10cee1244efd9292dd3c6 421 SUPERFAMILY SSF55021 251 333 8.89E-17 T 10-03-2017 CpPa04_RS00880 94ab703768f10cee1244efd9292dd3c6 421 Pfam PF01842 ACT domain 270 329 2.9E-7 T 10-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 CpPa04_RS00880 94ab703768f10cee1244efd9292dd3c6 421 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 2 407 7.6E-123 T 10-03-2017 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CpPa04_RS00880 94ab703768f10cee1244efd9292dd3c6 421 SUPERFAMILY SSF53633 4 243 8.77E-70 T 10-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase CpPa04_RS00880 94ab703768f10cee1244efd9292dd3c6 421 Pfam PF13840 ACT domain 341 403 8.4E-15 T 10-03-2017 IPR027795 GATS-like ACT domain CpPa04_RS00880 94ab703768f10cee1244efd9292dd3c6 421 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 406 5.9E-113 T 10-03-2017 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CpPa04_RS00880 94ab703768f10cee1244efd9292dd3c6 421 PIRSF PIRSF000726 59 414 4.1E-134 T 10-03-2017 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CpPa04_RS00880 94ab703768f10cee1244efd9292dd3c6 421 SUPERFAMILY SSF55021 335 409 2.35E-21 T 10-03-2017 CpPa04_RS00880 94ab703768f10cee1244efd9292dd3c6 421 Pfam PF00696 Amino acid kinase family 3 231 8.7E-52 T 10-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase CpPa04_RS00880 94ab703768f10cee1244efd9292dd3c6 421 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 10-03-2017 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CpPa04_RS05720 555887cf3ba3ba1ae7ccd05df5dbcb92 95 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 21 90 2.6E-25 T 10-03-2017 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS05720 555887cf3ba3ba1ae7ccd05df5dbcb92 95 SUPERFAMILY SSF63562 22 93 6.28E-23 T 10-03-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CpPa04_RS05720 555887cf3ba3ba1ae7ccd05df5dbcb92 95 Gene3D G3DSA:3.90.940.10 21 94 2.0E-32 T 10-03-2017 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CpPa04_RS05720 555887cf3ba3ba1ae7ccd05df5dbcb92 95 Pfam PF01192 RNA polymerase Rpb6 28 90 8.0E-16 T 10-03-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CpPa04_RS05720 555887cf3ba3ba1ae7ccd05df5dbcb92 95 SMART SM01409 28 92 1.6E-15 T 10-03-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CpPa04_RS05720 555887cf3ba3ba1ae7ccd05df5dbcb92 95 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 21 93 15.524 T 10-03-2017 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS07660 cc761f31d95d2327c78179d7b7d70b8c 624 Pfam PF13522 Glutamine amidotransferase domain 72 192 9.4E-19 T 10-03-2017 CpPa04_RS07660 cc761f31d95d2327c78179d7b7d70b8c 624 SUPERFAMILY SSF53697 256 624 1.3E-108 T 10-03-2017 CpPa04_RS07660 cc761f31d95d2327c78179d7b7d70b8c 624 SUPERFAMILY SSF56235 2 246 2.14E-63 T 10-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal CpPa04_RS07660 cc761f31d95d2327c78179d7b7d70b8c 624 Gene3D G3DSA:3.40.50.10490 457 624 6.4E-63 T 10-03-2017 CpPa04_RS07660 cc761f31d95d2327c78179d7b7d70b8c 624 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 624 2.4E-240 T 10-03-2017 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CpPa04_RS07660 cc761f31d95d2327c78179d7b7d70b8c 624 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 624 39.845 T 10-03-2017 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CpPa04_RS07660 cc761f31d95d2327c78179d7b7d70b8c 624 Pfam PF01380 SIS domain 301 426 8.8E-32 T 10-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 CpPa04_RS07660 cc761f31d95d2327c78179d7b7d70b8c 624 Pfam PF01380 SIS domain 473 605 3.6E-22 T 10-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 CpPa04_RS07660 cc761f31d95d2327c78179d7b7d70b8c 624 Gene3D G3DSA:3.40.50.10490 255 456 7.2E-66 T 10-03-2017 CpPa04_RS07660 cc761f31d95d2327c78179d7b7d70b8c 624 Gene3D G3DSA:3.60.20.10 2 251 5.7E-72 T 10-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal CpPa04_RS03465 76b8e4c8218bc87c6889bfc5f1ee674d 290 Pfam PF00398 Ribosomal RNA adenine dimethylase 28 286 1.7E-44 T 10-03-2017 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CpPa04_RS03465 76b8e4c8218bc87c6889bfc5f1ee674d 290 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 25 287 6.1E-75 T 10-03-2017 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CpPa04_RS03465 76b8e4c8218bc87c6889bfc5f1ee674d 290 Gene3D G3DSA:3.40.50.150 9 211 1.9E-68 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS03465 76b8e4c8218bc87c6889bfc5f1ee674d 290 SMART SM00650 40 214 1.9E-67 T 10-03-2017 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 CpPa04_RS03465 76b8e4c8218bc87c6889bfc5f1ee674d 290 SUPERFAMILY SSF53335 25 288 1.06E-63 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS03465 76b8e4c8218bc87c6889bfc5f1ee674d 290 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 56 83 - T 10-03-2017 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 CpPa04_RS03465 76b8e4c8218bc87c6889bfc5f1ee674d 290 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 24 290 47.297 T 10-03-2017 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CpPa04_RS03465 76b8e4c8218bc87c6889bfc5f1ee674d 290 Gene3D G3DSA:1.10.8.100 227 287 9.1E-21 T 10-03-2017 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201 CpPa04_RS09160 ecdd16520fc69ba2b2eb5c3da8fc2925 480 Gene3D G3DSA:1.10.3860.10 29 428 3.9E-105 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS09160 ecdd16520fc69ba2b2eb5c3da8fc2925 480 SUPERFAMILY SSF118215 33 424 5.1E-102 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS09160 ecdd16520fc69ba2b2eb5c3da8fc2925 480 PRINTS PR00173 Glutamate-aspartate symporter signature 31 51 2.6E-24 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS09160 ecdd16520fc69ba2b2eb5c3da8fc2925 480 PRINTS PR00173 Glutamate-aspartate symporter signature 98 123 2.6E-24 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS09160 ecdd16520fc69ba2b2eb5c3da8fc2925 480 PRINTS PR00173 Glutamate-aspartate symporter signature 350 369 2.6E-24 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS09160 ecdd16520fc69ba2b2eb5c3da8fc2925 480 PRINTS PR00173 Glutamate-aspartate symporter signature 214 233 2.6E-24 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS09160 ecdd16520fc69ba2b2eb5c3da8fc2925 480 PRINTS PR00173 Glutamate-aspartate symporter signature 315 341 2.6E-24 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS09160 ecdd16520fc69ba2b2eb5c3da8fc2925 480 Pfam PF00375 Sodium:dicarboxylate symporter family 33 424 3.5E-98 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS09795 55a1caaf0720fdab1b6373cb18f56f76 1083 Pfam PF01336 OB-fold nucleic acid binding domain 648 720 4.6E-8 T 10-03-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CpPa04_RS09795 55a1caaf0720fdab1b6373cb18f56f76 1083 PRINTS PR00982 Lysyl-tRNA synthetase signature 774 784 2.3E-28 T 10-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CpPa04_RS09795 55a1caaf0720fdab1b6373cb18f56f76 1083 PRINTS PR00982 Lysyl-tRNA synthetase signature 837 854 2.3E-28 T 10-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CpPa04_RS09795 55a1caaf0720fdab1b6373cb18f56f76 1083 PRINTS PR00982 Lysyl-tRNA synthetase signature 958 974 2.3E-28 T 10-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CpPa04_RS09795 55a1caaf0720fdab1b6373cb18f56f76 1083 PRINTS PR00982 Lysyl-tRNA synthetase signature 819 832 2.3E-28 T 10-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CpPa04_RS09795 55a1caaf0720fdab1b6373cb18f56f76 1083 PRINTS PR00982 Lysyl-tRNA synthetase signature 790 806 2.3E-28 T 10-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CpPa04_RS09795 55a1caaf0720fdab1b6373cb18f56f76 1083 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 600 1075 1.2E-129 T 10-03-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CpPa04_RS09795 55a1caaf0720fdab1b6373cb18f56f76 1083 Gene3D G3DSA:3.30.930.10 737 1070 3.8E-95 T 10-03-2017 CpPa04_RS09795 55a1caaf0720fdab1b6373cb18f56f76 1083 SUPERFAMILY SSF50249 598 731 4.65E-23 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS09795 55a1caaf0720fdab1b6373cb18f56f76 1083 Pfam PF00152 tRNA synthetases class II (D, K and N) 739 1071 5.3E-71 T 10-03-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS09795 55a1caaf0720fdab1b6373cb18f56f76 1083 SUPERFAMILY SSF55681 738 1073 1.1E-93 T 10-03-2017 CpPa04_RS09795 55a1caaf0720fdab1b6373cb18f56f76 1083 Pfam PF16995 Transmembrane region of lysyl-tRNA synthetase 15 232 2.2E-10 T 10-03-2017 IPR031553 Lysyl-tRNA synthetase, N-terminal transmembrane region KEGG: 00970+6.1.1.6 CpPa04_RS09795 55a1caaf0720fdab1b6373cb18f56f76 1083 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 250 544 1.2E-78 T 10-03-2017 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal CpPa04_RS09795 55a1caaf0720fdab1b6373cb18f56f76 1083 Gene3D G3DSA:2.40.50.140 600 731 2.3E-26 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS09795 55a1caaf0720fdab1b6373cb18f56f76 1083 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 604 1075 32.895 T 10-03-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CpPa04_RS02225 c7d6c0c91a45a95ca911d75aaac95b67 340 Pfam PF00005 ABC transporter 25 173 5.7E-34 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS02225 c7d6c0c91a45a95ca911d75aaac95b67 340 SMART SM00382 34 222 1.2E-14 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS02225 c7d6c0c91a45a95ca911d75aaac95b67 340 Gene3D G3DSA:3.30.70.260 241 332 6.7E-8 T 10-03-2017 CpPa04_RS02225 c7d6c0c91a45a95ca911d75aaac95b67 340 SUPERFAMILY SSF52540 6 244 3.84E-84 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02225 c7d6c0c91a45a95ca911d75aaac95b67 340 SUPERFAMILY SSF55021 261 336 1.83E-6 T 10-03-2017 CpPa04_RS02225 c7d6c0c91a45a95ca911d75aaac95b67 340 Pfam PF09383 NIL domain 287 330 1.3E-4 T 10-03-2017 IPR018449 NIL domain CpPa04_RS02225 c7d6c0c91a45a95ca911d75aaac95b67 340 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS02225 c7d6c0c91a45a95ca911d75aaac95b67 340 Gene3D G3DSA:3.40.50.300 6 240 1.4E-86 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01145 ef19c8828dbe65268efc457ad6ad10e2 785 TIGRFAM TIGR03817 DECH_helic: helicase/secretion neighborhood putative DEAH-box helicase 29 780 0.0 T 10-03-2017 IPR022307 DEAD/DEAH-box helicase, putative, actinobacteria CpPa04_RS01145 ef19c8828dbe65268efc457ad6ad10e2 785 SMART SM00487 61 273 1.8E-16 T 10-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CpPa04_RS01145 ef19c8828dbe65268efc457ad6ad10e2 785 SMART SM00490 332 414 7.8E-12 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS01145 ef19c8828dbe65268efc457ad6ad10e2 785 Gene3D G3DSA:3.40.50.300 33 258 4.0E-25 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01145 ef19c8828dbe65268efc457ad6ad10e2 785 Pfam PF09369 Domain of unknown function (DUF1998) 674 753 1.3E-18 T 10-03-2017 IPR018973 DEAD/DEAH-box helicase, putative CpPa04_RS01145 ef19c8828dbe65268efc457ad6ad10e2 785 Gene3D G3DSA:3.40.50.300 300 452 1.4E-20 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01145 ef19c8828dbe65268efc457ad6ad10e2 785 Pfam PF00271 Helicase conserved C-terminal domain 306 414 2.2E-11 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS01145 ef19c8828dbe65268efc457ad6ad10e2 785 Pfam PF00270 DEAD/DEAH box helicase 67 244 4.4E-19 T 10-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CpPa04_RS01145 ef19c8828dbe65268efc457ad6ad10e2 785 SUPERFAMILY SSF52540 277 422 7.0E-37 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01145 ef19c8828dbe65268efc457ad6ad10e2 785 SUPERFAMILY SSF52540 76 245 7.0E-37 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03360 75829c6442fdba8216985888ee283964 513 SUPERFAMILY SSF158472 198 245 1.83E-7 T 10-03-2017 CpPa04_RS03360 75829c6442fdba8216985888ee283964 513 Gene3D G3DSA:1.10.287.130 239 317 4.5E-13 T 10-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CpPa04_RS03360 75829c6442fdba8216985888ee283964 513 SUPERFAMILY SSF47384 232 320 1.39E-13 T 10-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CpPa04_RS03360 75829c6442fdba8216985888ee283964 513 SMART SM00304 196 248 1.3E-9 T 10-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CpPa04_RS03360 75829c6442fdba8216985888ee283964 513 SUPERFAMILY SSF55874 311 470 1.57E-36 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS03360 75829c6442fdba8216985888ee283964 513 Gene3D G3DSA:3.30.565.10 325 470 1.3E-36 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS03360 75829c6442fdba8216985888ee283964 513 SMART SM00388 249 321 1.3E-9 T 10-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CpPa04_RS03360 75829c6442fdba8216985888ee283964 513 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 469 9.9E-14 T 10-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CpPa04_RS03360 75829c6442fdba8216985888ee283964 513 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 427 9.9E-14 T 10-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CpPa04_RS03360 75829c6442fdba8216985888ee283964 513 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 450 9.9E-14 T 10-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CpPa04_RS03360 75829c6442fdba8216985888ee283964 513 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 413 9.9E-14 T 10-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CpPa04_RS03360 75829c6442fdba8216985888ee283964 513 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 320 1.1E-11 T 10-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CpPa04_RS03360 75829c6442fdba8216985888ee283964 513 SMART SM00387 361 472 8.4E-32 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS03360 75829c6442fdba8216985888ee283964 513 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 361 469 5.2E-21 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS03360 75829c6442fdba8216985888ee283964 513 Pfam PF00672 HAMP domain 176 244 3.0E-13 T 10-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CpPa04_RS02015 e2dd9e9f19d8a5cb93af1d356e5ad6e3 161 TIGRFAM TIGR00059 L17: ribosomal protein bL17 9 116 3.1E-37 T 10-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS02015 e2dd9e9f19d8a5cb93af1d356e5ad6e3 161 Gene3D G3DSA:3.90.1030.10 3 116 5.4E-43 T 10-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS02015 e2dd9e9f19d8a5cb93af1d356e5ad6e3 161 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 24.179 T 10-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS02015 e2dd9e9f19d8a5cb93af1d356e5ad6e3 161 Pfam PF01196 Ribosomal protein L17 21 116 2.9E-33 T 10-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS02015 e2dd9e9f19d8a5cb93af1d356e5ad6e3 161 SUPERFAMILY SSF64263 1 116 9.16E-42 T 10-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS02015 e2dd9e9f19d8a5cb93af1d356e5ad6e3 161 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 10-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS07025 bf79985e983195d8532c0ad57c8b4901 464 Pfam PF00817 impB/mucB/samB family 8 155 9.9E-39 T 10-03-2017 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CpPa04_RS07025 bf79985e983195d8532c0ad57c8b4901 464 Pfam PF11799 impB/mucB/samB family C-terminal domain 238 346 4.6E-20 T 10-03-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CpPa04_RS07025 bf79985e983195d8532c0ad57c8b4901 464 Pfam PF11798 IMS family HHH motif 170 199 6.3E-6 T 10-03-2017 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CpPa04_RS07025 bf79985e983195d8532c0ad57c8b4901 464 Hamap MF_01113 DNA polymerase IV [dinB]. 2 356 33.504 T 10-03-2017 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CpPa04_RS07025 bf79985e983195d8532c0ad57c8b4901 464 Gene3D G3DSA:3.30.70.270 71 166 4.6E-21 T 10-03-2017 CpPa04_RS07025 bf79985e983195d8532c0ad57c8b4901 464 Gene3D G3DSA:1.10.150.20 167 240 1.6E-22 T 10-03-2017 CpPa04_RS07025 bf79985e983195d8532c0ad57c8b4901 464 SUPERFAMILY SSF100879 242 341 8.01E-23 T 10-03-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CpPa04_RS07025 bf79985e983195d8532c0ad57c8b4901 464 SUPERFAMILY SSF56672 3 240 3.02E-71 T 10-03-2017 CpPa04_RS07025 bf79985e983195d8532c0ad57c8b4901 464 Gene3D G3DSA:3.30.1490.100 244 347 1.8E-24 T 10-03-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CpPa04_RS08065 6f931b10490bde304b698b34ff8946f6 520 SUPERFAMILY SSF53623 72 375 2.34E-84 T 10-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CpPa04_RS08065 6f931b10490bde304b698b34ff8946f6 520 Pfam PF02875 Mur ligase family, glutamate ligase domain 377 455 3.6E-8 T 10-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CpPa04_RS08065 6f931b10490bde304b698b34ff8946f6 520 TIGRFAM TIGR01499 folC: bifunctional protein FolC 86 514 3.5E-95 T 10-03-2017 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CpPa04_RS08065 6f931b10490bde304b698b34ff8946f6 520 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 208 223 - T 10-03-2017 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 CpPa04_RS08065 6f931b10490bde304b698b34ff8946f6 520 SUPERFAMILY SSF53244 378 517 1.17E-25 T 10-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CpPa04_RS08065 6f931b10490bde304b698b34ff8946f6 520 Pfam PF08245 Mur ligase middle domain 108 350 5.0E-17 T 10-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CpPa04_RS08065 6f931b10490bde304b698b34ff8946f6 520 Gene3D G3DSA:3.40.1190.10 73 377 1.8E-94 T 10-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CpPa04_RS08065 6f931b10490bde304b698b34ff8946f6 520 Gene3D G3DSA:3.90.190.20 378 517 1.1E-37 T 10-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CpPa04_RS08785 1342a76afa14b59b27d561b7f4793743 141 TIGRFAM TIGR00333 nrdI: nrdI protein 9 133 2.9E-44 T 10-03-2017 IPR004465 Ribonucleotide reductase Class Ib, NrdI CpPa04_RS08785 1342a76afa14b59b27d561b7f4793743 141 Hamap MF_00128 Protein NrdI [nrdI]. 7 137 32.001 T 10-03-2017 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial CpPa04_RS08785 1342a76afa14b59b27d561b7f4793743 141 Pfam PF07972 NrdI Flavodoxin like 9 127 5.0E-44 T 10-03-2017 IPR004465 Ribonucleotide reductase Class Ib, NrdI CpPa04_RS08785 1342a76afa14b59b27d561b7f4793743 141 SUPERFAMILY SSF52218 6 128 6.65E-23 T 10-03-2017 IPR029039 Flavoprotein-like domain CpPa04_RS08785 1342a76afa14b59b27d561b7f4793743 141 Gene3D G3DSA:3.40.50.360 8 136 4.3E-48 T 10-03-2017 IPR029039 Flavoprotein-like domain CpPa04_RS08785 1342a76afa14b59b27d561b7f4793743 141 PIRSF PIRSF005087 5 140 4.2E-51 T 10-03-2017 IPR004465 Ribonucleotide reductase Class Ib, NrdI CpPa04_RS02980 878b292fd9fad0cf972cde10d42cc11c 251 SUPERFAMILY SSF52540 2 226 9.47E-57 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02980 878b292fd9fad0cf972cde10d42cc11c 251 Pfam PF00005 ABC transporter 20 164 2.4E-26 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS02980 878b292fd9fad0cf972cde10d42cc11c 251 Gene3D G3DSA:3.40.50.300 1 227 2.1E-57 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02980 878b292fd9fad0cf972cde10d42cc11c 251 SMART SM00382 26 213 2.5E-10 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS08105 9fcbe22920bfa1f61b3d478d9ad70d7c 450 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 258 417 2.1E-37 T 10-03-2017 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CpPa04_RS08105 9fcbe22920bfa1f61b3d478d9ad70d7c 450 SUPERFAMILY SSF109998 245 435 3.92E-36 T 10-03-2017 IPR027304 Trigger factor/SurA domain CpPa04_RS08105 9fcbe22920bfa1f61b3d478d9ad70d7c 450 TIGRFAM TIGR00115 tig: trigger factor 12 416 1.3E-114 T 10-03-2017 IPR005215 Trigger factor GO:0015031 CpPa04_RS08105 9fcbe22920bfa1f61b3d478d9ad70d7c 450 SUPERFAMILY SSF102735 2 129 9.02E-35 T 10-03-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CpPa04_RS08105 9fcbe22920bfa1f61b3d478d9ad70d7c 450 Gene3D G3DSA:3.10.50.40 154 212 2.5E-5 T 10-03-2017 CpPa04_RS08105 9fcbe22920bfa1f61b3d478d9ad70d7c 450 PIRSF PIRSF003095 1 445 4.5E-113 T 10-03-2017 IPR005215 Trigger factor GO:0015031 CpPa04_RS08105 9fcbe22920bfa1f61b3d478d9ad70d7c 450 SUPERFAMILY SSF54534 133 244 4.91E-21 T 10-03-2017 CpPa04_RS08105 9fcbe22920bfa1f61b3d478d9ad70d7c 450 Hamap MF_00303 Trigger factor [tig]. 1 424 17.924 T 10-03-2017 IPR005215 Trigger factor GO:0015031 CpPa04_RS08105 9fcbe22920bfa1f61b3d478d9ad70d7c 450 Gene3D G3DSA:1.10.3120.10 213 392 4.2E-42 T 10-03-2017 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CpPa04_RS08105 9fcbe22920bfa1f61b3d478d9ad70d7c 450 Pfam PF05697 Bacterial trigger factor protein (TF) 2 145 1.6E-40 T 10-03-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CpPa04_RS08105 9fcbe22920bfa1f61b3d478d9ad70d7c 450 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 220 1.9E-5 T 10-03-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 CpPa04_RS08105 9fcbe22920bfa1f61b3d478d9ad70d7c 450 Gene3D G3DSA:3.30.70.1050 2 118 9.3E-35 T 10-03-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CpPa04_RS04795 c6814485c9e7e73eedf8156f28db13d5 127 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 2 114 1.5E-42 T 10-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS04795 c6814485c9e7e73eedf8156f28db13d5 127 Gene3D G3DSA:1.10.1900.20 56 118 1.3E-28 T 10-03-2017 CpPa04_RS04795 c6814485c9e7e73eedf8156f28db13d5 127 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 10-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS04795 c6814485c9e7e73eedf8156f28db13d5 127 Pfam PF00453 Ribosomal protein L20 3 109 1.6E-42 T 10-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS04795 c6814485c9e7e73eedf8156f28db13d5 127 SUPERFAMILY SSF74731 3 117 3.66E-44 T 10-03-2017 CpPa04_RS04795 c6814485c9e7e73eedf8156f28db13d5 127 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 27.611 T 10-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS04795 c6814485c9e7e73eedf8156f28db13d5 127 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.7E-38 T 10-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS04795 c6814485c9e7e73eedf8156f28db13d5 127 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.7E-38 T 10-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS04795 c6814485c9e7e73eedf8156f28db13d5 127 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.7E-38 T 10-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS04795 c6814485c9e7e73eedf8156f28db13d5 127 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 70 2.0E-22 T 10-03-2017 CpPa04_RS05500 bf761a630b5477a278d5aaf0b0040577 89 Gene3D G3DSA:3.30.70.260 2 88 1.5E-24 T 10-03-2017 CpPa04_RS05500 bf761a630b5477a278d5aaf0b0040577 89 SUPERFAMILY SSF55021 3 83 1.6E-16 T 10-03-2017 CpPa04_RS05500 bf761a630b5477a278d5aaf0b0040577 89 Pfam PF13740 ACT domain 4 76 4.1E-10 T 10-03-2017 CpPa04_RS05500 bf761a630b5477a278d5aaf0b0040577 89 Hamap MF_01054 UPF0237 protein . 1 89 22.193 T 10-03-2017 IPR022986 Uncharacterised protein family UPF0237, ACT-type CpPa04_RS00315 17d338ff6a6c83d8d55804c5ef6b8334 143 PIRSF PIRSF032285 2 143 2.3E-44 T 10-03-2017 IPR011235 MepB-like CpPa04_RS00315 17d338ff6a6c83d8d55804c5ef6b8334 143 Pfam PF08877 MepB protein 22 140 3.1E-41 T 10-03-2017 IPR011235 MepB-like CpPa04_RS02000 48922c24fcc8f2da844b07f72a159e22 134 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 17 131 1.6E-57 T 10-03-2017 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS02000 48922c24fcc8f2da844b07f72a159e22 134 Pfam PF00411 Ribosomal protein S11 24 133 4.4E-47 T 10-03-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CpPa04_RS02000 48922c24fcc8f2da844b07f72a159e22 134 Gene3D G3DSA:3.30.420.80 14 134 1.2E-54 T 10-03-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CpPa04_RS02000 48922c24fcc8f2da844b07f72a159e22 134 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 4 134 32.753 T 10-03-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CpPa04_RS02000 48922c24fcc8f2da844b07f72a159e22 134 ProSitePatterns PS00054 Ribosomal protein S11 signature. 102 124 - T 10-03-2017 IPR018102 Ribosomal S11, conserved site CpPa04_RS02000 48922c24fcc8f2da844b07f72a159e22 134 PIRSF PIRSF002131 3 134 2.3E-53 T 10-03-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CpPa04_RS02000 48922c24fcc8f2da844b07f72a159e22 134 SUPERFAMILY SSF53137 19 134 2.24E-49 T 10-03-2017 CpPa04_RS03150 8944e730e8bd4070792ad87492178010 452 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 82 317 5.7E-13 T 10-03-2017 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CpPa04_RS03150 8944e730e8bd4070792ad87492178010 452 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 196 209 1.4E-5 T 10-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CpPa04_RS03150 8944e730e8bd4070792ad87492178010 452 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 90 102 1.4E-5 T 10-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CpPa04_RS03150 8944e730e8bd4070792ad87492178010 452 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 309 328 1.4E-5 T 10-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CpPa04_RS03150 8944e730e8bd4070792ad87492178010 452 SUPERFAMILY SSF50621 302 440 4.97E-13 T 10-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CpPa04_RS03150 8944e730e8bd4070792ad87492178010 452 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 338 436 4.0E-5 T 10-03-2017 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CpPa04_RS03150 8944e730e8bd4070792ad87492178010 452 Gene3D G3DSA:3.20.20.10 43 242 1.9E-24 T 10-03-2017 IPR029066 PLP-binding barrel CpPa04_RS03150 8944e730e8bd4070792ad87492178010 452 SUPERFAMILY SSF51419 279 319 7.1E-24 T 10-03-2017 IPR029066 PLP-binding barrel CpPa04_RS03150 8944e730e8bd4070792ad87492178010 452 SUPERFAMILY SSF51419 33 250 7.1E-24 T 10-03-2017 IPR029066 PLP-binding barrel CpPa04_RS03150 8944e730e8bd4070792ad87492178010 452 Gene3D G3DSA:2.40.37.10 243 254 1.2E-21 T 10-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CpPa04_RS03150 8944e730e8bd4070792ad87492178010 452 Gene3D G3DSA:2.40.37.10 287 442 1.2E-21 T 10-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CpPa04_RS01890 7d8d9a77ecde49d77906a34f1cecdcdb 178 Gene3D G3DSA:3.90.930.12 83 177 2.4E-37 T 10-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01890 7d8d9a77ecde49d77906a34f1cecdcdb 178 Gene3D G3DSA:3.90.930.12 2 82 2.0E-31 T 10-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01890 7d8d9a77ecde49d77906a34f1cecdcdb 178 PIRSF PIRSF002162 1 177 5.7E-51 T 10-03-2017 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01890 7d8d9a77ecde49d77906a34f1cecdcdb 178 SUPERFAMILY SSF56053 1 82 1.02E-26 T 10-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01890 7d8d9a77ecde49d77906a34f1cecdcdb 178 SUPERFAMILY SSF56053 83 177 4.06E-35 T 10-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01890 7d8d9a77ecde49d77906a34f1cecdcdb 178 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.7E-30 T 10-03-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CpPa04_RS01890 7d8d9a77ecde49d77906a34f1cecdcdb 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.7E-30 T 10-03-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CpPa04_RS01890 7d8d9a77ecde49d77906a34f1cecdcdb 178 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.7E-30 T 10-03-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CpPa04_RS01890 7d8d9a77ecde49d77906a34f1cecdcdb 178 Pfam PF00347 Ribosomal protein L6 11 82 6.1E-20 T 10-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01890 7d8d9a77ecde49d77906a34f1cecdcdb 178 Pfam PF00347 Ribosomal protein L6 90 164 5.9E-18 T 10-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01890 7d8d9a77ecde49d77906a34f1cecdcdb 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.86 T 10-03-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CpPa04_RS01890 7d8d9a77ecde49d77906a34f1cecdcdb 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.4E-73 T 10-03-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CpPa04_RS01220 e29f2b7c193c7897b0282267c6c954e2 359 Pfam PF00756 Putative esterase 76 349 1.6E-24 T 10-03-2017 IPR000801 Putative esterase Reactome: R-HSA-156590 CpPa04_RS01220 e29f2b7c193c7897b0282267c6c954e2 359 SUPERFAMILY SSF53474 313 357 1.04E-21 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS01220 e29f2b7c193c7897b0282267c6c954e2 359 SUPERFAMILY SSF53474 68 284 1.04E-21 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS01220 e29f2b7c193c7897b0282267c6c954e2 359 Gene3D G3DSA:3.40.50.1820 67 358 9.6E-87 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS10580 7065560454cf46c6e1cff84662171741 341 SUPERFAMILY SSF52418 77 332 8.11E-83 T 10-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CpPa04_RS10580 7065560454cf46c6e1cff84662171741 341 Gene3D G3DSA:3.40.1030.10 77 333 1.8E-96 T 10-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CpPa04_RS10580 7065560454cf46c6e1cff84662171741 341 Pfam PF00591 Glycosyl transferase family, a/b domain 79 326 2.6E-92 T 10-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CpPa04_RS10580 7065560454cf46c6e1cff84662171741 341 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 22 333 1.1E-107 T 10-03-2017 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CpPa04_RS10580 7065560454cf46c6e1cff84662171741 341 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 8 337 34.866 T 10-03-2017 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CpPa04_RS10580 7065560454cf46c6e1cff84662171741 341 SUPERFAMILY SSF47648 10 72 2.22E-10 T 10-03-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CpPa04_RS10580 7065560454cf46c6e1cff84662171741 341 Pfam PF02885 Glycosyl transferase family, helical bundle domain 14 69 2.6E-8 T 10-03-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CpPa04_RS10580 7065560454cf46c6e1cff84662171741 341 Gene3D G3DSA:1.20.970.10 20 73 4.0E-10 T 10-03-2017 CpPa04_RS05425 f7497e695856c3f08e99f1a92978bcf2 367 Gene3D G3DSA:3.40.50.300 91 294 4.2E-50 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05425 f7497e695856c3f08e99f1a92978bcf2 367 Gene3D G3DSA:1.10.287.130 299 357 8.8E-5 T 10-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CpPa04_RS05425 f7497e695856c3f08e99f1a92978bcf2 367 Gene3D G3DSA:1.20.5.170 36 90 2.0E-21 T 10-03-2017 CpPa04_RS05425 f7497e695856c3f08e99f1a92978bcf2 367 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 54 358 3.6E-109 T 10-03-2017 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CpPa04_RS05425 f7497e695856c3f08e99f1a92978bcf2 367 Pfam PF03308 ArgK protein 59 329 3.9E-107 T 10-03-2017 CpPa04_RS05425 f7497e695856c3f08e99f1a92978bcf2 367 SUPERFAMILY SSF52540 39 361 7.24E-89 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02780 3182ad01bda98880dffa87f49e219fc0 351 SMART SM00228 120 201 8.2E-5 T 10-03-2017 IPR001478 PDZ domain GO:0005515 CpPa04_RS02780 3182ad01bda98880dffa87f49e219fc0 351 SUPERFAMILY SSF50156 146 246 3.29E-18 T 10-03-2017 IPR001478 PDZ domain GO:0005515 CpPa04_RS02780 3182ad01bda98880dffa87f49e219fc0 351 Pfam PF13180 PDZ domain 153 210 3.7E-12 T 10-03-2017 IPR001478 PDZ domain GO:0005515 CpPa04_RS02780 3182ad01bda98880dffa87f49e219fc0 351 Gene3D G3DSA:2.30.42.10 147 216 4.2E-17 T 10-03-2017 IPR001478 PDZ domain GO:0005515 CpPa04_RS02780 3182ad01bda98880dffa87f49e219fc0 351 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 245 336 4.3E-8 T 10-03-2017 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 CpPa04_RS02780 3182ad01bda98880dffa87f49e219fc0 351 SUPERFAMILY SSF54211 238 336 2.12E-19 T 10-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CpPa04_RS02780 3182ad01bda98880dffa87f49e219fc0 351 Gene3D G3DSA:3.30.230.10 242 335 2.2E-21 T 10-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CpPa04_RS04900 8c44978b79c93d2757a577f0c8a185ca 273 SUPERFAMILY SSF55174 4 58 1.02E-9 T 10-03-2017 CpPa04_RS04900 8c44978b79c93d2757a577f0c8a185ca 273 Pfam PF01479 S4 domain 6 49 1.2E-8 T 10-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 CpPa04_RS04900 8c44978b79c93d2757a577f0c8a185ca 273 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 6 241 3.2E-56 T 10-03-2017 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 CpPa04_RS04900 8c44978b79c93d2757a577f0c8a185ca 273 SMART SM00363 5 63 1.0E-7 T 10-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 CpPa04_RS04900 8c44978b79c93d2757a577f0c8a185ca 273 Gene3D G3DSA:3.10.290.10 5 95 7.7E-20 T 10-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 CpPa04_RS04900 8c44978b79c93d2757a577f0c8a185ca 273 Gene3D G3DSA:3.40.50.150 96 177 1.1E-5 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS04900 8c44978b79c93d2757a577f0c8a185ca 273 PIRSF PIRSF005578 1 267 1.1E-91 T 10-03-2017 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 CpPa04_RS04900 8c44978b79c93d2757a577f0c8a185ca 273 Pfam PF01728 FtsJ-like methyltransferase 63 247 9.0E-20 T 10-03-2017 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CpPa04_RS04900 8c44978b79c93d2757a577f0c8a185ca 273 SUPERFAMILY SSF53335 59 264 1.58E-19 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS03990 10dce6f8bfdfab180237d4b7a1257767 288 PIRSF PIRSF018249 3 288 1.3E-65 T 10-03-2017 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 CpPa04_RS03990 10dce6f8bfdfab180237d4b7a1257767 288 SUPERFAMILY SSF53335 25 221 4.94E-25 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS03990 10dce6f8bfdfab180237d4b7a1257767 288 Gene3D G3DSA:3.40.50.150 88 208 5.0E-15 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS03990 10dce6f8bfdfab180237d4b7a1257767 288 Pfam PF08241 Methyltransferase domain 103 189 5.5E-7 T 10-03-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CpPa04_RS05555 29cf0a42c0f4adb21bebafc9e99596cb 484 SUPERFAMILY SSF101960 50 481 3.14E-139 T 10-03-2017 CpPa04_RS05555 29cf0a42c0f4adb21bebafc9e99596cb 484 Pfam PF01458 Uncharacterized protein family (UPF0051) 230 455 1.7E-72 T 10-03-2017 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 CpPa04_RS05555 29cf0a42c0f4adb21bebafc9e99596cb 484 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 29 475 3.4E-220 T 10-03-2017 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 CpPa04_RS03585 e7657ad3ce76117755c76fdd48a90936 547 Pfam PF07731 Multicopper oxidase 404 520 1.9E-25 T 10-03-2017 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 CpPa04_RS03585 e7657ad3ce76117755c76fdd48a90936 547 SUPERFAMILY SSF49503 220 333 1.48E-20 T 10-03-2017 IPR008972 Cupredoxin CpPa04_RS03585 e7657ad3ce76117755c76fdd48a90936 547 Gene3D G3DSA:2.60.40.420 375 529 7.0E-30 T 10-03-2017 IPR008972 Cupredoxin CpPa04_RS03585 e7657ad3ce76117755c76fdd48a90936 547 SUPERFAMILY SSF49503 408 518 2.22E-25 T 10-03-2017 IPR008972 Cupredoxin CpPa04_RS03585 e7657ad3ce76117755c76fdd48a90936 547 ProSitePatterns PS00080 Multicopper oxidases signature 2. 503 514 - T 10-03-2017 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 CpPa04_RS03585 e7657ad3ce76117755c76fdd48a90936 547 Gene3D G3DSA:2.60.40.420 218 333 1.0E-27 T 10-03-2017 IPR008972 Cupredoxin CpPa04_RS03585 e7657ad3ce76117755c76fdd48a90936 547 Pfam PF07732 Multicopper oxidase 103 213 4.4E-31 T 10-03-2017 IPR011707 Multicopper oxidase, type 3 GO:0005507 CpPa04_RS03585 e7657ad3ce76117755c76fdd48a90936 547 Gene3D G3DSA:2.60.40.420 81 217 3.2E-31 T 10-03-2017 IPR008972 Cupredoxin CpPa04_RS03585 e7657ad3ce76117755c76fdd48a90936 547 SUPERFAMILY SSF49503 83 213 7.37E-32 T 10-03-2017 IPR008972 Cupredoxin CpPa04_RS06815 9184083b5cbc9a88ef1f6e662afead0f 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 195 217 1.6E-31 T 10-03-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 CpPa04_RS06815 9184083b5cbc9a88ef1f6e662afead0f 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 237 257 1.6E-31 T 10-03-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 CpPa04_RS06815 9184083b5cbc9a88ef1f6e662afead0f 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 115 129 1.6E-31 T 10-03-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 CpPa04_RS06815 9184083b5cbc9a88ef1f6e662afead0f 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 1.6E-31 T 10-03-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 CpPa04_RS06815 9184083b5cbc9a88ef1f6e662afead0f 448 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 204 446 1.2E-86 T 10-03-2017 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 CpPa04_RS06815 9184083b5cbc9a88ef1f6e662afead0f 448 Gene3D G3DSA:3.40.50.720 211 372 1.6E-63 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS06815 9184083b5cbc9a88ef1f6e662afead0f 448 Gene3D G3DSA:3.40.192.10 69 190 2.3E-61 T 10-03-2017 CpPa04_RS06815 9184083b5cbc9a88ef1f6e662afead0f 448 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 123 136 - T 10-03-2017 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-70614 CpPa04_RS06815 9184083b5cbc9a88ef1f6e662afead0f 448 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 58 186 4.6E-49 T 10-03-2017 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 CpPa04_RS06815 9184083b5cbc9a88ef1f6e662afead0f 448 PIRSF PIRSF000185 23 448 3.8E-118 T 10-03-2017 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 CpPa04_RS06815 9184083b5cbc9a88ef1f6e662afead0f 448 SUPERFAMILY SSF51735 204 447 3.2E-77 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS06815 9184083b5cbc9a88ef1f6e662afead0f 448 SMART SM00839 206 446 1.7E-89 T 10-03-2017 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 CpPa04_RS06815 9184083b5cbc9a88ef1f6e662afead0f 448 SUPERFAMILY SSF53223 9 198 1.06E-74 T 10-03-2017 CpPa04_RS06815 9184083b5cbc9a88ef1f6e662afead0f 448 Gene3D G3DSA:1.10.285.10 7 68 1.1E-26 T 10-03-2017 CpPa04_RS06815 9184083b5cbc9a88ef1f6e662afead0f 448 Gene3D G3DSA:1.10.285.10 373 447 1.6E-26 T 10-03-2017 CpPa04_RS06705 a854f31295cd6ae53cf898ae8a231a9d 113 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 112 4.1E-50 T 10-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS06705 a854f31295cd6ae53cf898ae8a231a9d 113 PRINTS PR00061 Ribosomal protein L19 signature 33 62 5.4E-42 T 10-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS06705 a854f31295cd6ae53cf898ae8a231a9d 113 PRINTS PR00061 Ribosomal protein L19 signature 3 32 5.4E-42 T 10-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS06705 a854f31295cd6ae53cf898ae8a231a9d 113 PRINTS PR00061 Ribosomal protein L19 signature 87 112 5.4E-42 T 10-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS06705 a854f31295cd6ae53cf898ae8a231a9d 113 PIRSF PIRSF002191 1 113 1.0E-50 T 10-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS06705 a854f31295cd6ae53cf898ae8a231a9d 113 ProSitePatterns PS01015 Ribosomal protein L19 signature. 85 100 - T 10-03-2017 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS06705 a854f31295cd6ae53cf898ae8a231a9d 113 SUPERFAMILY SSF50104 1 112 9.03E-47 T 10-03-2017 IPR008991 Translation protein SH3-like domain CpPa04_RS06705 a854f31295cd6ae53cf898ae8a231a9d 113 Pfam PF01245 Ribosomal protein L19 2 112 1.1E-50 T 10-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS06705 a854f31295cd6ae53cf898ae8a231a9d 113 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 113 29.799 T 10-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS03260 5e59c5b2fc7f2a54792e2b686d8fa868 100 Pfam PF01817 Chorismate mutase type II 28 81 2.5E-8 T 10-03-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CpPa04_RS03260 5e59c5b2fc7f2a54792e2b686d8fa868 100 SMART SM00830 28 96 6.7E-5 T 10-03-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CpPa04_RS03260 5e59c5b2fc7f2a54792e2b686d8fa868 100 SUPERFAMILY SSF48600 21 84 4.88E-12 T 10-03-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CpPa04_RS03260 5e59c5b2fc7f2a54792e2b686d8fa868 100 TIGRFAM TIGR01808 CM_M_hiGC-arch: chorismate mutase 23 97 3.6E-37 T 10-03-2017 IPR010958 Chorismate mutase, high GC Gram-positive bacteria/archaeal CpPa04_RS03260 5e59c5b2fc7f2a54792e2b686d8fa868 100 Gene3D G3DSA:1.20.59.10 13 82 2.6E-13 T 10-03-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CpPa04_RS06105 4e90e2aaf226e1466aba89a79727ee13 640 SMART SM00861 317 480 3.0E-54 T 10-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain CpPa04_RS06105 4e90e2aaf226e1466aba89a79727ee13 640 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 4 281 1.2E-103 T 10-03-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CpPa04_RS06105 4e90e2aaf226e1466aba89a79727ee13 640 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 3 628 40.765 T 10-03-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CpPa04_RS06105 4e90e2aaf226e1466aba89a79727ee13 640 SUPERFAMILY SSF52922 507 625 1.11E-22 T 10-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CpPa04_RS06105 4e90e2aaf226e1466aba89a79727ee13 640 SUPERFAMILY SSF52518 3 347 2.95E-65 T 10-03-2017 IPR029061 Thiamin diphosphate-binding fold CpPa04_RS06105 4e90e2aaf226e1466aba89a79727ee13 640 Pfam PF02780 Transketolase, C-terminal domain 505 619 1.3E-26 T 10-03-2017 IPR033248 Transketolase, C-terminal domain CpPa04_RS06105 4e90e2aaf226e1466aba89a79727ee13 640 ProSitePatterns PS00801 Transketolase signature 1. 29 48 - T 10-03-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CpPa04_RS06105 4e90e2aaf226e1466aba89a79727ee13 640 Gene3D G3DSA:3.40.50.970 297 480 1.3E-57 T 10-03-2017 IPR029061 Thiamin diphosphate-binding fold CpPa04_RS06105 4e90e2aaf226e1466aba89a79727ee13 640 ProSitePatterns PS00802 Transketolase signature 2. 423 439 - T 10-03-2017 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CpPa04_RS06105 4e90e2aaf226e1466aba89a79727ee13 640 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 6 624 7.5E-183 T 10-03-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CpPa04_RS06105 4e90e2aaf226e1466aba89a79727ee13 640 Pfam PF02779 Transketolase, pyrimidine binding domain 317 479 2.2E-37 T 10-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain CpPa04_RS06105 4e90e2aaf226e1466aba89a79727ee13 640 SUPERFAMILY SSF52518 295 479 8.56E-54 T 10-03-2017 IPR029061 Thiamin diphosphate-binding fold CpPa04_RS06105 4e90e2aaf226e1466aba89a79727ee13 640 Gene3D G3DSA:3.40.50.920 509 626 4.4E-25 T 10-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CpPa04_RS06105 4e90e2aaf226e1466aba89a79727ee13 640 Gene3D G3DSA:3.40.50.970 238 296 1.1E-44 T 10-03-2017 IPR029061 Thiamin diphosphate-binding fold CpPa04_RS06105 4e90e2aaf226e1466aba89a79727ee13 640 Gene3D G3DSA:3.40.50.970 5 190 1.1E-44 T 10-03-2017 IPR029061 Thiamin diphosphate-binding fold CpPa04_RS05110 8126245ea8a47255a340b565e4aa475d 467 SUPERFAMILY SSF54631 211 351 2.02E-26 T 10-03-2017 CpPa04_RS05110 8126245ea8a47255a340b565e4aa475d 467 Gene3D G3DSA:3.30.465.10 337 449 1.4E-20 T 10-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CpPa04_RS05110 8126245ea8a47255a340b565e4aa475d 467 Pfam PF00571 CBS domain 222 276 1.3E-5 T 10-03-2017 IPR000644 CBS domain CpPa04_RS05110 8126245ea8a47255a340b565e4aa475d 467 SMART SM01091 357 451 2.0E-17 T 10-03-2017 IPR005170 Transporter-associated domain CpPa04_RS05110 8126245ea8a47255a340b565e4aa475d 467 Gene3D G3DSA:3.10.580.10 212 336 4.8E-16 T 10-03-2017 CpPa04_RS05110 8126245ea8a47255a340b565e4aa475d 467 Pfam PF03471 Transporter associated domain 359 449 2.8E-17 T 10-03-2017 IPR005170 Transporter-associated domain CpPa04_RS05110 8126245ea8a47255a340b565e4aa475d 467 Pfam PF01595 Domain of unknown function DUF21 13 205 4.2E-35 T 10-03-2017 IPR002550 Domain of unknown function DUF21 CpPa04_RS05110 8126245ea8a47255a340b565e4aa475d 467 SUPERFAMILY SSF56176 361 455 6.0E-17 T 10-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CpPa04_RS03545 a2082363e3f409604b8698b2fd7d8ef1 217 Pfam PF01195 Peptidyl-tRNA hydrolase 36 213 6.5E-49 T 10-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CpPa04_RS03545 a2082363e3f409604b8698b2fd7d8ef1 217 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 47 60 - T 10-03-2017 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CpPa04_RS03545 a2082363e3f409604b8698b2fd7d8ef1 217 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 34 208 29.391 T 10-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CpPa04_RS03545 a2082363e3f409604b8698b2fd7d8ef1 217 SUPERFAMILY SSF53178 35 215 4.32E-54 T 10-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CpPa04_RS03545 a2082363e3f409604b8698b2fd7d8ef1 217 Gene3D G3DSA:3.40.50.1470 29 216 6.4E-60 T 10-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CpPa04_RS03545 a2082363e3f409604b8698b2fd7d8ef1 217 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 36 215 8.3E-48 T 10-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CpPa04_RS05950 fb5fabe00f6ebdee62b657af9fa94108 622 SUPERFAMILY SSF82866 359 567 2.88E-29 T 10-03-2017 CpPa04_RS05950 fb5fabe00f6ebdee62b657af9fa94108 622 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 11 574 34.903 T 10-03-2017 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CpPa04_RS05950 fb5fabe00f6ebdee62b657af9fa94108 622 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 46 559 9.0E-101 T 10-03-2017 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CpPa04_RS05950 fb5fabe00f6ebdee62b657af9fa94108 622 Gene3D G3DSA:1.20.1640.10 398 568 5.2E-19 T 10-03-2017 CpPa04_RS05950 fb5fabe00f6ebdee62b657af9fa94108 622 Pfam PF02355 Protein export membrane protein 395 563 3.2E-9 T 10-03-2017 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CpPa04_RS05950 fb5fabe00f6ebdee62b657af9fa94108 622 Pfam PF07549 SecD/SecF GG Motif 45 58 0.0046 T 10-03-2017 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CpPa04_RS05950 fb5fabe00f6ebdee62b657af9fa94108 622 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 314 551 1.6E-57 T 10-03-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CpPa04_RS06760 f2c86d0a832ab73265e2427122d58582 548 Pfam PF00448 SRP54-type protein, GTPase domain 349 548 9.1E-71 T 10-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CpPa04_RS06760 f2c86d0a832ab73265e2427122d58582 548 Gene3D G3DSA:1.20.120.140 277 358 9.0E-24 T 10-03-2017 CpPa04_RS06760 f2c86d0a832ab73265e2427122d58582 548 SMART SM00963 252 332 2.2E-14 T 10-03-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CpPa04_RS06760 f2c86d0a832ab73265e2427122d58582 548 Pfam PF02881 SRP54-type protein, helical bundle domain 267 327 7.0E-9 T 10-03-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CpPa04_RS06760 f2c86d0a832ab73265e2427122d58582 548 SMART SM00962 349 548 2.2E-100 T 10-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CpPa04_RS06760 f2c86d0a832ab73265e2427122d58582 548 SMART SM00382 348 499 2.4E-8 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS06760 f2c86d0a832ab73265e2427122d58582 548 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 275 548 57.118 T 10-03-2017 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CpPa04_RS06760 f2c86d0a832ab73265e2427122d58582 548 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 276 547 1.7E-101 T 10-03-2017 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CpPa04_RS06760 f2c86d0a832ab73265e2427122d58582 548 SUPERFAMILY SSF52540 344 547 3.05E-46 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06760 f2c86d0a832ab73265e2427122d58582 548 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 521 534 - T 10-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CpPa04_RS06760 f2c86d0a832ab73265e2427122d58582 548 SUPERFAMILY SSF47364 247 326 3.93E-17 T 10-03-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CpPa04_RS06760 f2c86d0a832ab73265e2427122d58582 548 Gene3D G3DSA:3.40.50.300 359 548 1.3E-71 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05550 c4a2fd7ee5d5483c56607062d851d8fa 393 Pfam PF01458 Uncharacterized protein family (UPF0051) 135 362 1.1E-71 T 10-03-2017 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 CpPa04_RS05550 c4a2fd7ee5d5483c56607062d851d8fa 393 SUPERFAMILY SSF101960 26 387 6.28E-89 T 10-03-2017 CpPa04_RS05550 c4a2fd7ee5d5483c56607062d851d8fa 393 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 103 379 3.6E-74 T 10-03-2017 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 CpPa04_RS07895 eeddb06e048a28cf5f552767ea681b41 440 SUPERFAMILY SSF64307 362 433 8.24E-18 T 10-03-2017 IPR001455 TusA-like domain CpPa04_RS07895 eeddb06e048a28cf5f552767ea681b41 440 Pfam PF01206 Sulfurtransferase TusA 364 431 2.3E-15 T 10-03-2017 IPR001455 TusA-like domain CpPa04_RS07895 eeddb06e048a28cf5f552767ea681b41 440 Gene3D G3DSA:3.30.110.40 363 433 5.3E-19 T 10-03-2017 IPR001455 TusA-like domain CpPa04_RS07895 eeddb06e048a28cf5f552767ea681b41 440 Pfam PF04143 Sulphur transport 18 320 3.1E-88 T 10-03-2017 IPR007272 Sulphur transport domain CpPa04_RS07895 eeddb06e048a28cf5f552767ea681b41 440 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 365 389 - T 10-03-2017 IPR001455 TusA-like domain CpPa04_RS01795 69c0c5849ec499f67e2da4069f7db7db 280 Gene3D G3DSA:2.30.30.30 120 196 5.8E-30 T 10-03-2017 IPR014722 Ribosomal protein L2 domain 2 CpPa04_RS01795 69c0c5849ec499f67e2da4069f7db7db 280 SUPERFAMILY SSF50249 2 126 6.85E-51 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS01795 69c0c5849ec499f67e2da4069f7db7db 280 Gene3D G3DSA:2.40.50.140 1 115 1.3E-52 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS01795 69c0c5849ec499f67e2da4069f7db7db 280 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.125 T 10-03-2017 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS01795 69c0c5849ec499f67e2da4069f7db7db 280 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 7.3E-55 T 10-03-2017 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CpPa04_RS01795 69c0c5849ec499f67e2da4069f7db7db 280 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 9.1E-129 T 10-03-2017 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS01795 69c0c5849ec499f67e2da4069f7db7db 280 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 10-03-2017 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01795 69c0c5849ec499f67e2da4069f7db7db 280 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 119 7.9E-33 T 10-03-2017 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01795 69c0c5849ec499f67e2da4069f7db7db 280 SUPERFAMILY SSF50104 127 271 1.68E-55 T 10-03-2017 IPR008991 Translation protein SH3-like domain CpPa04_RS01795 69c0c5849ec499f67e2da4069f7db7db 280 Gene3D G3DSA:4.10.950.10 197 273 2.5E-31 T 10-03-2017 IPR014726 Ribosomal protein L2, domain 3 CpPa04_RS01795 69c0c5849ec499f67e2da4069f7db7db 280 PIRSF PIRSF002158 4 275 7.0E-94 T 10-03-2017 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01795 69c0c5849ec499f67e2da4069f7db7db 280 SMART SM01383 42 119 2.6E-43 T 10-03-2017 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01795 69c0c5849ec499f67e2da4069f7db7db 280 SMART SM01382 125 253 3.3E-88 T 10-03-2017 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CpPa04_RS05525 52542ac1879f5e181d526b3f68d80441 543 Gene3D G3DSA:3.40.50.300 339 527 3.3E-39 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05525 52542ac1879f5e181d526b3f68d80441 543 SUPERFAMILY SSF52540 22 239 3.0E-39 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05525 52542ac1879f5e181d526b3f68d80441 543 Pfam PF12848 ABC transporter 242 312 7.8E-9 T 10-03-2017 IPR032781 ABC-transporter extension domain CpPa04_RS05525 52542ac1879f5e181d526b3f68d80441 543 ProSitePatterns PS00211 ABC transporters family signature. 454 468 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS05525 52542ac1879f5e181d526b3f68d80441 543 SUPERFAMILY SSF52540 341 527 7.78E-44 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05525 52542ac1879f5e181d526b3f68d80441 543 SMART SM00382 360 528 6.5E-10 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS05525 52542ac1879f5e181d526b3f68d80441 543 SMART SM00382 28 241 1.5E-13 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS05525 52542ac1879f5e181d526b3f68d80441 543 Gene3D G3DSA:3.40.50.300 22 104 5.0E-43 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05525 52542ac1879f5e181d526b3f68d80441 543 Gene3D G3DSA:3.40.50.300 138 292 5.0E-43 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05525 52542ac1879f5e181d526b3f68d80441 543 Pfam PF00005 ABC transporter 353 482 4.5E-21 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS05525 52542ac1879f5e181d526b3f68d80441 543 Pfam PF00005 ABC transporter 24 197 3.9E-19 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS05525 52542ac1879f5e181d526b3f68d80441 543 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS04225 3c3900c62d5f5a9257d03d1393cabb1e 550 Hamap MF_00123 Arginine--tRNA ligase [argS]. 8 550 26.661 T 10-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CpPa04_RS04225 3c3900c62d5f5a9257d03d1393cabb1e 550 SUPERFAMILY SSF52374 118 439 1.29E-81 T 10-03-2017 CpPa04_RS04225 3c3900c62d5f5a9257d03d1393cabb1e 550 Gene3D G3DSA:1.10.730.10 434 550 2.2E-44 T 10-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS04225 3c3900c62d5f5a9257d03d1393cabb1e 550 Pfam PF05746 DALR anticodon binding domain 429 550 5.4E-38 T 10-03-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CpPa04_RS04225 3c3900c62d5f5a9257d03d1393cabb1e 550 PRINTS PR01038 Arginyl-tRNA synthetase signature 137 153 6.0E-24 T 10-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CpPa04_RS04225 3c3900c62d5f5a9257d03d1393cabb1e 550 PRINTS PR01038 Arginyl-tRNA synthetase signature 161 174 6.0E-24 T 10-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CpPa04_RS04225 3c3900c62d5f5a9257d03d1393cabb1e 550 PRINTS PR01038 Arginyl-tRNA synthetase signature 298 319 6.0E-24 T 10-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CpPa04_RS04225 3c3900c62d5f5a9257d03d1393cabb1e 550 PRINTS PR01038 Arginyl-tRNA synthetase signature 122 137 6.0E-24 T 10-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CpPa04_RS04225 3c3900c62d5f5a9257d03d1393cabb1e 550 Gene3D G3DSA:3.40.50.620 118 433 6.0E-90 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS04225 3c3900c62d5f5a9257d03d1393cabb1e 550 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 132 141 - T 10-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS04225 3c3900c62d5f5a9257d03d1393cabb1e 550 SMART SM00836 429 550 6.5E-55 T 10-03-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CpPa04_RS04225 3c3900c62d5f5a9257d03d1393cabb1e 550 SUPERFAMILY SSF47323 423 550 1.18E-37 T 10-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS04225 3c3900c62d5f5a9257d03d1393cabb1e 550 SMART SM01016 4 93 6.7E-32 T 10-03-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CpPa04_RS04225 3c3900c62d5f5a9257d03d1393cabb1e 550 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 13 550 3.0E-127 T 10-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CpPa04_RS04225 3c3900c62d5f5a9257d03d1393cabb1e 550 SUPERFAMILY SSF55190 8 113 3.66E-21 T 10-03-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CpPa04_RS04225 3c3900c62d5f5a9257d03d1393cabb1e 550 Gene3D G3DSA:3.30.1360.70 2 111 4.3E-29 T 10-03-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CpPa04_RS04225 3c3900c62d5f5a9257d03d1393cabb1e 550 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 24 93 4.6E-22 T 10-03-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CpPa04_RS04225 3c3900c62d5f5a9257d03d1393cabb1e 550 Pfam PF00750 tRNA synthetases class I (R) 105 390 2.2E-19 T 10-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CpPa04_RS08705 690e7318c40e4c6bcd1ec70b6b771b71 250 Gene3D G3DSA:1.20.58.220 1 106 1.5E-16 T 10-03-2017 CpPa04_RS08705 690e7318c40e4c6bcd1ec70b6b771b71 250 Pfam PF01895 PhoU domain 122 203 4.4E-10 T 10-03-2017 IPR026022 PhoU domain CpPa04_RS08705 690e7318c40e4c6bcd1ec70b6b771b71 250 Pfam PF01895 PhoU domain 19 103 3.1E-9 T 10-03-2017 IPR026022 PhoU domain CpPa04_RS08705 690e7318c40e4c6bcd1ec70b6b771b71 250 Gene3D G3DSA:1.20.58.220 117 210 1.3E-16 T 10-03-2017 CpPa04_RS08705 690e7318c40e4c6bcd1ec70b6b771b71 250 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 4 210 2.1E-42 T 10-03-2017 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CpPa04_RS08705 690e7318c40e4c6bcd1ec70b6b771b71 250 SUPERFAMILY SSF109755 2 218 5.55E-45 T 10-03-2017 CpPa04_RS03945 e10799cddb2d4d0c80413a7c81b11d19 324 Gene3D G3DSA:3.30.60.70 108 147 3.8E-6 T 10-03-2017 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 CpPa04_RS03945 e10799cddb2d4d0c80413a7c81b11d19 324 Gene3D G3DSA:2.160.10.10 149 312 2.5E-33 T 10-03-2017 CpPa04_RS03945 e10799cddb2d4d0c80413a7c81b11d19 324 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 322 43.637 T 10-03-2017 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 CpPa04_RS03945 e10799cddb2d4d0c80413a7c81b11d19 324 SUPERFAMILY SSF51161 79 304 2.75E-39 T 10-03-2017 IPR011004 Trimeric LpxA-like CpPa04_RS03945 e10799cddb2d4d0c80413a7c81b11d19 324 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 229 261 1.6E-15 T 10-03-2017 IPR001451 Hexapeptide repeat CpPa04_RS03945 e10799cddb2d4d0c80413a7c81b11d19 324 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 108 147 2.3E-19 T 10-03-2017 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 CpPa04_RS03945 e10799cddb2d4d0c80413a7c81b11d19 324 TIGRFAM TIGR03535 DapD_actino: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 2 324 1.6E-163 T 10-03-2017 IPR019875 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, actinobacteria KEGG: 00300+2.3.1.117 CpPa04_RS02065 0bc45d0e94a8ca7a4198849968f8587b 147 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 7 141 1.7E-55 T 10-03-2017 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS02065 0bc45d0e94a8ca7a4198849968f8587b 147 PIRSF PIRSF002181 2 147 2.3E-43 T 10-03-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CpPa04_RS02065 0bc45d0e94a8ca7a4198849968f8587b 147 Pfam PF00572 Ribosomal protein L13 14 138 2.6E-50 T 10-03-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CpPa04_RS02065 0bc45d0e94a8ca7a4198849968f8587b 147 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 143 26.779 T 10-03-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CpPa04_RS02065 0bc45d0e94a8ca7a4198849968f8587b 147 Gene3D G3DSA:3.90.1180.10 3 141 1.7E-57 T 10-03-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CpPa04_RS02065 0bc45d0e94a8ca7a4198849968f8587b 147 SUPERFAMILY SSF52161 5 144 1.44E-53 T 10-03-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CpPa04_RS04075 7e7f8e03c387ac6debc282964bbb9a08 539 SUPERFAMILY SSF53474 16 504 1.42E-103 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS04075 7e7f8e03c387ac6debc282964bbb9a08 539 Gene3D G3DSA:3.40.50.1820 10 502 2.5E-117 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS04075 7e7f8e03c387ac6debc282964bbb9a08 539 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 185 200 - T 10-03-2017 IPR019826 Carboxylesterase type B, active site CpPa04_RS04075 7e7f8e03c387ac6debc282964bbb9a08 539 Pfam PF00135 Carboxylesterase family 17 468 5.2E-89 T 10-03-2017 IPR002018 Carboxylesterase, type B CpPa04_RS06220 2017a5b854a2b9e02f689a54c9688792 198 Pfam PF00578 AhpC/TSA family 6 146 1.2E-33 T 10-03-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CpPa04_RS06220 2017a5b854a2b9e02f689a54c9688792 198 Gene3D G3DSA:3.40.30.10 3 163 1.1E-58 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS06220 2017a5b854a2b9e02f689a54c9688792 198 PIRSF PIRSF000239 1 197 1.9E-50 T 10-03-2017 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CpPa04_RS06220 2017a5b854a2b9e02f689a54c9688792 198 Gene3D G3DSA:3.30.1020.10 164 184 2.4E-4 T 10-03-2017 CpPa04_RS06220 2017a5b854a2b9e02f689a54c9688792 198 SUPERFAMILY SSF52833 4 187 1.1E-53 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS06640 8dd32da5e9b3a79157bfd335e0808e14 292 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 247 273 - T 10-03-2017 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981 CpPa04_RS06640 8dd32da5e9b3a79157bfd335e0808e14 292 Pfam PF01148 Cytidylyltransferase family 25 288 2.6E-54 T 10-03-2017 CpPa04_RS05830 a058bda1ac8698e5365163ada2640ca5 197 Gene3D G3DSA:3.30.420.140 16 165 2.6E-45 T 10-03-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 CpPa04_RS05830 a058bda1ac8698e5365163ada2640ca5 197 Pfam PF03652 Holliday junction resolvase 17 158 8.6E-40 T 10-03-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CpPa04_RS05830 a058bda1ac8698e5365163ada2640ca5 197 SUPERFAMILY SSF53098 16 160 1.09E-32 T 10-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CpPa04_RS05830 a058bda1ac8698e5365163ada2640ca5 197 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 16 161 23.116 T 10-03-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CpPa04_RS05830 a058bda1ac8698e5365163ada2640ca5 197 SMART SM00732 16 126 1.7E-29 T 10-03-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 CpPa04_RS05830 a058bda1ac8698e5365163ada2640ca5 197 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 19 158 6.4E-27 T 10-03-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CpPa04_RS02505 98fa306c55a87b84c596f4d70c2123b8 401 Gene3D G3DSA:3.40.50.20 13 122 3.8E-28 T 10-03-2017 IPR016185 Pre-ATP-grasp domain CpPa04_RS02505 98fa306c55a87b84c596f4d70c2123b8 401 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 17 381 36.754 T 10-03-2017 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CpPa04_RS02505 98fa306c55a87b84c596f4d70c2123b8 401 Gene3D G3DSA:3.30.470.20 154 398 3.9E-78 T 10-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CpPa04_RS02505 98fa306c55a87b84c596f4d70c2123b8 401 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 18 384 1.9E-110 T 10-03-2017 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CpPa04_RS02505 98fa306c55a87b84c596f4d70c2123b8 401 SUPERFAMILY SSF52440 11 109 6.47E-22 T 10-03-2017 IPR016185 Pre-ATP-grasp domain CpPa04_RS02505 98fa306c55a87b84c596f4d70c2123b8 401 Pfam PF02222 ATP-grasp domain 123 299 7.3E-45 T 10-03-2017 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CpPa04_RS02505 98fa306c55a87b84c596f4d70c2123b8 401 SUPERFAMILY SSF56059 114 319 5.3E-54 T 10-03-2017 CpPa04_RS02505 98fa306c55a87b84c596f4d70c2123b8 401 SUPERFAMILY SSF51246 325 398 5.73E-16 T 10-03-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CpPa04_RS07295 0174f2ecb703fdc47aac4e2508a8917d 951 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 13 941 0.0 T 10-03-2017 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CpPa04_RS07295 0174f2ecb703fdc47aac4e2508a8917d 951 Gene3D G3DSA:3.90.1150.10 345 399 1.4E-4 T 10-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CpPa04_RS07295 0174f2ecb703fdc47aac4e2508a8917d 951 SUPERFAMILY SSF53383 13 436 2.24E-97 T 10-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase CpPa04_RS07295 0174f2ecb703fdc47aac4e2508a8917d 951 SUPERFAMILY SSF53383 432 877 9.18E-92 T 10-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase CpPa04_RS07295 0174f2ecb703fdc47aac4e2508a8917d 951 SUPERFAMILY SSF53383 920 943 9.18E-92 T 10-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase CpPa04_RS07295 0174f2ecb703fdc47aac4e2508a8917d 951 Pfam PF02347 Glycine cleavage system P-protein 440 720 1.1E-11 T 10-03-2017 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CpPa04_RS07295 0174f2ecb703fdc47aac4e2508a8917d 951 Pfam PF02347 Glycine cleavage system P-protein 13 435 1.4E-163 T 10-03-2017 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CpPa04_RS07295 0174f2ecb703fdc47aac4e2508a8917d 951 Gene3D G3DSA:3.40.640.10 489 721 1.7E-35 T 10-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CpPa04_RS07295 0174f2ecb703fdc47aac4e2508a8917d 951 Gene3D G3DSA:3.40.640.10 82 298 1.1E-11 T 10-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CpPa04_RS02690 6a02b0ed0d36d642ca8f6392b595bc53 223 SUPERFAMILY SSF88659 120 179 5.23E-17 T 10-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS02690 6a02b0ed0d36d642ca8f6392b595bc53 223 Pfam PF04542 Sigma-70 region 2 19 82 1.6E-18 T 10-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS02690 6a02b0ed0d36d642ca8f6392b595bc53 223 Pfam PF08281 Sigma-70, region 4 122 174 2.9E-17 T 10-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS02690 6a02b0ed0d36d642ca8f6392b595bc53 223 Gene3D G3DSA:1.10.1740.10 11 83 5.8E-27 T 10-03-2017 CpPa04_RS02690 6a02b0ed0d36d642ca8f6392b595bc53 223 Gene3D G3DSA:1.10.10.10 121 180 5.0E-24 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS02690 6a02b0ed0d36d642ca8f6392b595bc53 223 SUPERFAMILY SSF88946 12 95 1.51E-23 T 10-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS02690 6a02b0ed0d36d642ca8f6392b595bc53 223 TIGRFAM TIGR02947 SigH_actino: RNA polymerase sigma-70 factor, TIGR02947 family 4 191 3.5E-97 T 10-03-2017 IPR014293 RNA polymerase sigma-70, actinobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS02690 6a02b0ed0d36d642ca8f6392b595bc53 223 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 178 3.5E-29 T 10-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS02690 6a02b0ed0d36d642ca8f6392b595bc53 223 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 37 68 - T 10-03-2017 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS01780 65afdeda3587beabe5767023c318c7ed 218 Gene3D G3DSA:4.10.960.10 81 162 6.1E-32 T 10-03-2017 CpPa04_RS01780 65afdeda3587beabe5767023c318c7ed 218 Pfam PF00297 Ribosomal protein L3 103 187 2.2E-17 T 10-03-2017 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01780 65afdeda3587beabe5767023c318c7ed 218 Gene3D G3DSA:2.40.30.10 163 213 9.9E-15 T 10-03-2017 CpPa04_RS01780 65afdeda3587beabe5767023c318c7ed 218 Gene3D G3DSA:2.40.30.10 8 37 9.9E-15 T 10-03-2017 CpPa04_RS01780 65afdeda3587beabe5767023c318c7ed 218 ProSitePatterns PS00474 Ribosomal protein L3 signature. 106 129 - T 10-03-2017 IPR019926 Ribosomal protein L3, conserved site CpPa04_RS01780 65afdeda3587beabe5767023c318c7ed 218 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 8 209 1.1E-88 T 10-03-2017 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS01780 65afdeda3587beabe5767023c318c7ed 218 SUPERFAMILY SSF50447 6 214 8.56E-82 T 10-03-2017 IPR009000 Translation protein, beta-barrel domain CpPa04_RS01780 65afdeda3587beabe5767023c318c7ed 218 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 6 212 39.691 T 10-03-2017 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS06670 ae92e21cef284351206ae448aeda29d5 293 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 293 52.757 T 10-03-2017 IPR023009 Tyrosine recombinase XerC/XerD CpPa04_RS06670 ae92e21cef284351206ae448aeda29d5 293 Gene3D G3DSA:1.10.443.10 109 286 4.0E-58 T 10-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CpPa04_RS06670 ae92e21cef284351206ae448aeda29d5 293 SUPERFAMILY SSF47823 6 94 3.34E-12 T 10-03-2017 IPR010998 Integrase, Lambda-type, N-terminal CpPa04_RS06670 ae92e21cef284351206ae448aeda29d5 293 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 86 6.1E-12 T 10-03-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CpPa04_RS06670 ae92e21cef284351206ae448aeda29d5 293 Pfam PF00589 Phage integrase family 108 278 4.2E-46 T 10-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CpPa04_RS06670 ae92e21cef284351206ae448aeda29d5 293 Gene3D G3DSA:1.10.150.130 4 95 1.2E-17 T 10-03-2017 IPR023109 Integrase/recombinase, N-terminal CpPa04_RS06670 ae92e21cef284351206ae448aeda29d5 293 SUPERFAMILY SSF56349 104 290 2.33E-53 T 10-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CpPa04_RS03815 8d1a2d77f9057c3c4e870419d3c1b877 558 Gene3D G3DSA:1.20.1560.10 25 320 2.7E-22 T 10-03-2017 CpPa04_RS03815 8d1a2d77f9057c3c4e870419d3c1b877 558 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS03815 8d1a2d77f9057c3c4e870419d3c1b877 558 SUPERFAMILY SSF90123 23 321 8.11E-26 T 10-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CpPa04_RS03815 8d1a2d77f9057c3c4e870419d3c1b877 558 Gene3D G3DSA:3.40.50.300 345 557 5.6E-61 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03815 8d1a2d77f9057c3c4e870419d3c1b877 558 SUPERFAMILY SSF52540 342 557 5.73E-64 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03815 8d1a2d77f9057c3c4e870419d3c1b877 558 Pfam PF00005 ABC transporter 361 510 1.9E-27 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS03815 8d1a2d77f9057c3c4e870419d3c1b877 558 Pfam PF00664 ABC transporter transmembrane region 34 292 5.4E-12 T 10-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CpPa04_RS03815 8d1a2d77f9057c3c4e870419d3c1b877 558 SMART SM00382 370 556 1.2E-13 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS06260 d2d9aa9da5087d5bc85317a0a7800cea 564 SUPERFAMILY SSF51621 256 542 1.36E-79 T 10-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CpPa04_RS06260 d2d9aa9da5087d5bc85317a0a7800cea 564 Gene3D G3DSA:3.50.30.10 137 256 2.7E-33 T 10-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CpPa04_RS06260 d2d9aa9da5087d5bc85317a0a7800cea 564 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 259 533 1.1E-74 T 10-03-2017 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CpPa04_RS06260 d2d9aa9da5087d5bc85317a0a7800cea 564 Gene3D G3DSA:1.10.274.10 41 136 3.7E-15 T 10-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CpPa04_RS06260 d2d9aa9da5087d5bc85317a0a7800cea 564 SUPERFAMILY SSF47831 45 144 1.18E-16 T 10-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CpPa04_RS06260 d2d9aa9da5087d5bc85317a0a7800cea 564 Pfam PF00391 PEP-utilising enzyme, mobile domain 155 228 9.4E-21 T 10-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CpPa04_RS06260 d2d9aa9da5087d5bc85317a0a7800cea 564 Pfam PF05524 PEP-utilising enzyme, N-terminal 11 129 1.4E-17 T 10-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CpPa04_RS06260 d2d9aa9da5087d5bc85317a0a7800cea 564 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 457 472 1.1E-20 T 10-03-2017 CpPa04_RS06260 d2d9aa9da5087d5bc85317a0a7800cea 564 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 440 455 1.1E-20 T 10-03-2017 CpPa04_RS06260 d2d9aa9da5087d5bc85317a0a7800cea 564 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 1.1E-20 T 10-03-2017 CpPa04_RS06260 d2d9aa9da5087d5bc85317a0a7800cea 564 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 493 505 1.1E-20 T 10-03-2017 CpPa04_RS06260 d2d9aa9da5087d5bc85317a0a7800cea 564 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 187 198 - T 10-03-2017 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CpPa04_RS06260 d2d9aa9da5087d5bc85317a0a7800cea 564 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 440 458 - T 10-03-2017 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CpPa04_RS06260 d2d9aa9da5087d5bc85317a0a7800cea 564 PIRSF PIRSF000732 5 564 1.1E-144 T 10-03-2017 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 CpPa04_RS06260 d2d9aa9da5087d5bc85317a0a7800cea 564 Gene3D G3DSA:3.20.20.60 258 561 4.4E-85 T 10-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CpPa04_RS06260 d2d9aa9da5087d5bc85317a0a7800cea 564 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 11 556 1.4E-111 T 10-03-2017 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 CpPa04_RS06260 d2d9aa9da5087d5bc85317a0a7800cea 564 SUPERFAMILY SSF52009 128 245 1.96E-30 T 10-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CpPa04_RS06190 ca07e674f41dddeaa9c5c1023140ccae 226 SUPERFAMILY SSF50037 130 225 2.52E-22 T 10-03-2017 IPR008988 Transcriptional repressor, C-terminal CpPa04_RS06190 ca07e674f41dddeaa9c5c1023140ccae 226 SUPERFAMILY SSF46785 2 61 6.94E-13 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS06190 ca07e674f41dddeaa9c5c1023140ccae 226 Gene3D G3DSA:2.30.30.90 148 223 4.1E-30 T 10-03-2017 CpPa04_RS06190 ca07e674f41dddeaa9c5c1023140ccae 226 SMART SM00529 26 125 1.0E-42 T 10-03-2017 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 CpPa04_RS06190 ca07e674f41dddeaa9c5c1023140ccae 226 SUPERFAMILY SSF47979 65 137 6.41E-24 T 10-03-2017 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 CpPa04_RS06190 ca07e674f41dddeaa9c5c1023140ccae 226 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 65 133 2.2E-25 T 10-03-2017 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 CpPa04_RS06190 ca07e674f41dddeaa9c5c1023140ccae 226 Gene3D G3DSA:1.10.60.10 75 136 1.8E-28 T 10-03-2017 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 CpPa04_RS06190 ca07e674f41dddeaa9c5c1023140ccae 226 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 3 61 2.9E-20 T 10-03-2017 IPR022687 DTXR-type HTH domain GO:0003677 CpPa04_RS06190 ca07e674f41dddeaa9c5c1023140ccae 226 Gene3D G3DSA:1.10.10.10 2 73 2.4E-28 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS03345 1feeab8abee754bfc25adf5e3acf1707 88 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 3.6E-23 T 10-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS03345 1feeab8abee754bfc25adf5e3acf1707 88 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 26.435 T 10-03-2017 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS03345 1feeab8abee754bfc25adf5e3acf1707 88 Pfam PF01197 Ribosomal protein L31 1 79 1.3E-32 T 10-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS03345 1feeab8abee754bfc25adf5e3acf1707 88 PRINTS PR01249 Ribosomal protein L31 signature 2 19 4.8E-18 T 10-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS03345 1feeab8abee754bfc25adf5e3acf1707 88 PRINTS PR01249 Ribosomal protein L31 signature 45 60 4.8E-18 T 10-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS03345 1feeab8abee754bfc25adf5e3acf1707 88 PRINTS PR01249 Ribosomal protein L31 signature 60 78 4.8E-18 T 10-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS03345 1feeab8abee754bfc25adf5e3acf1707 88 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 10-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS03345 1feeab8abee754bfc25adf5e3acf1707 88 SUPERFAMILY SSF143800 1 81 5.1E-24 T 10-03-2017 CpPa04_RS09790 579110a01d40b9757f069f6a41baf76b 510 Pfam PF07907 YibE/F-like protein 262 499 1.1E-65 T 10-03-2017 IPR012507 YibE/F-like CpPa04_RS08075 271a43f049c4c7ad07f6327970f23f70 326 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 5 320 1.3E-135 T 10-03-2017 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 CpPa04_RS08075 271a43f049c4c7ad07f6327970f23f70 326 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 158 322 4.3E-28 T 10-03-2017 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 CpPa04_RS08075 271a43f049c4c7ad07f6327970f23f70 326 Gene3D G3DSA:3.90.110.10 156 325 8.7E-67 T 10-03-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CpPa04_RS08075 271a43f049c4c7ad07f6327970f23f70 326 Hamap MF_01517 Malate dehydrogenase [mdh]. 2 325 51.043 T 10-03-2017 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 CpPa04_RS08075 271a43f049c4c7ad07f6327970f23f70 326 PIRSF PIRSF000102 2 325 1.1E-51 T 10-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CpPa04_RS08075 271a43f049c4c7ad07f6327970f23f70 326 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 147 6.2E-27 T 10-03-2017 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 CpPa04_RS08075 271a43f049c4c7ad07f6327970f23f70 326 SUPERFAMILY SSF51735 6 156 7.0E-37 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS08075 271a43f049c4c7ad07f6327970f23f70 326 Gene3D G3DSA:3.40.50.720 6 153 2.0E-45 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS08075 271a43f049c4c7ad07f6327970f23f70 326 SUPERFAMILY SSF56327 158 325 4.94E-54 T 10-03-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CpPa04_RS02425 aba4c2975031d7a38ea91ce32c8348ad 1141 Gene3D G3DSA:3.30.470.20 219 462 2.3E-97 T 10-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CpPa04_RS02425 aba4c2975031d7a38ea91ce32c8348ad 1141 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 18 1140 0.0 T 10-03-2017 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 CpPa04_RS02425 aba4c2975031d7a38ea91ce32c8348ad 1141 Pfam PF00682 HMGL-like 537 805 4.4E-24 T 10-03-2017 IPR000891 Pyruvate carboxyltransferase GO:0003824 CpPa04_RS02425 aba4c2975031d7a38ea91ce32c8348ad 1141 Gene3D G3DSA:3.20.20.70 515 824 6.9E-125 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS02425 aba4c2975031d7a38ea91ce32c8348ad 1141 SUPERFAMILY SSF56059 98 363 2.12E-62 T 10-03-2017 CpPa04_RS02425 aba4c2975031d7a38ea91ce32c8348ad 1141 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 1097 1114 - T 10-03-2017 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CpPa04_RS02425 aba4c2975031d7a38ea91ce32c8348ad 1141 Pfam PF02436 Conserved carboxylase domain 833 1018 8.5E-52 T 10-03-2017 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 CpPa04_RS02425 aba4c2975031d7a38ea91ce32c8348ad 1141 Pfam PF02785 Biotin carboxylase C-terminal domain 353 459 1.7E-34 T 10-03-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CpPa04_RS02425 aba4c2975031d7a38ea91ce32c8348ad 1141 SUPERFAMILY SSF52440 9 126 1.01E-41 T 10-03-2017 IPR016185 Pre-ATP-grasp domain CpPa04_RS02425 aba4c2975031d7a38ea91ce32c8348ad 1141 SUPERFAMILY SSF89000 838 1005 1.29E-40 T 10-03-2017 CpPa04_RS02425 aba4c2975031d7a38ea91ce32c8348ad 1141 Gene3D G3DSA:3.40.50.20 16 144 2.6E-44 T 10-03-2017 IPR016185 Pre-ATP-grasp domain CpPa04_RS02425 aba4c2975031d7a38ea91ce32c8348ad 1141 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 130 337 9.4E-68 T 10-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CpPa04_RS02425 aba4c2975031d7a38ea91ce32c8348ad 1141 Gene3D G3DSA:2.40.50.100 1066 1140 4.4E-18 T 10-03-2017 CpPa04_RS02425 aba4c2975031d7a38ea91ce32c8348ad 1141 SMART SM00878 353 459 7.2E-54 T 10-03-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CpPa04_RS02425 aba4c2975031d7a38ea91ce32c8348ad 1141 SUPERFAMILY SSF51569 532 841 4.4E-73 T 10-03-2017 CpPa04_RS02425 aba4c2975031d7a38ea91ce32c8348ad 1141 SUPERFAMILY SSF51246 348 463 3.92E-37 T 10-03-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CpPa04_RS02425 aba4c2975031d7a38ea91ce32c8348ad 1141 SUPERFAMILY SSF51230 1065 1140 3.01E-15 T 10-03-2017 IPR011053 Single hybrid motif CpPa04_RS02425 aba4c2975031d7a38ea91ce32c8348ad 1141 Pfam PF00364 Biotin-requiring enzyme 1082 1140 2.6E-14 T 10-03-2017 IPR000089 Biotin/lipoyl attachment CpPa04_RS02425 aba4c2975031d7a38ea91ce32c8348ad 1141 Gene3D G3DSA:3.30.1490.20 145 215 1.1E-19 T 10-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CpPa04_RS02425 aba4c2975031d7a38ea91ce32c8348ad 1141 Pfam PF00289 Biotin carboxylase, N-terminal domain 16 125 1.2E-38 T 10-03-2017 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CpPa04_RS02425 aba4c2975031d7a38ea91ce32c8348ad 1141 Gene3D G3DSA:3.10.600.10 974 1060 2.7E-25 T 10-03-2017 CpPa04_RS02425 aba4c2975031d7a38ea91ce32c8348ad 1141 PIRSF PIRSF001594 11 1141 0.0 T 10-03-2017 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 CpPa04_RS02425 aba4c2975031d7a38ea91ce32c8348ad 1141 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 300 307 - T 10-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CpPa04_RS02670 e02c8a15ff8f0c1a89a2cc687ac9f5bf 338 Gene3D G3DSA:3.40.50.300 119 269 2.6E-40 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02670 e02c8a15ff8f0c1a89a2cc687ac9f5bf 338 Gene3D G3DSA:1.10.40.50 271 336 4.8E-6 T 10-03-2017 CpPa04_RS02670 e02c8a15ff8f0c1a89a2cc687ac9f5bf 338 SUPERFAMILY SSF52540 119 297 1.75E-33 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02670 e02c8a15ff8f0c1a89a2cc687ac9f5bf 338 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 78 310 3.2E-37 T 10-03-2017 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 CpPa04_RS02670 e02c8a15ff8f0c1a89a2cc687ac9f5bf 338 Pfam PF03193 Protein of unknown function, DUF258 102 269 1.8E-39 T 10-03-2017 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 CpPa04_RS06730 f30ab1d4fa6f547d1079a662461e80fa 167 Gene3D G3DSA:2.40.30.60 3 83 5.2E-20 T 10-03-2017 IPR002676 RimM protein GO:0006364 CpPa04_RS06730 f30ab1d4fa6f547d1079a662461e80fa 167 Pfam PF05239 PRC-barrel domain 93 164 2.6E-10 T 10-03-2017 IPR027275 PRC-barrel domain CpPa04_RS06730 f30ab1d4fa6f547d1079a662461e80fa 167 Pfam PF01782 RimM N-terminal domain 5 84 2.3E-23 T 10-03-2017 IPR002676 RimM protein GO:0006364 CpPa04_RS06730 f30ab1d4fa6f547d1079a662461e80fa 167 Gene3D G3DSA:2.30.30.240 95 164 6.8E-19 T 10-03-2017 CpPa04_RS06730 f30ab1d4fa6f547d1079a662461e80fa 167 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 2 164 21.051 T 10-03-2017 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CpPa04_RS06730 f30ab1d4fa6f547d1079a662461e80fa 167 SUPERFAMILY SSF50346 95 164 6.47E-16 T 10-03-2017 IPR011033 PRC-barrel-like CpPa04_RS06730 f30ab1d4fa6f547d1079a662461e80fa 167 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 3 164 3.6E-39 T 10-03-2017 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CpPa04_RS06730 f30ab1d4fa6f547d1079a662461e80fa 167 SUPERFAMILY SSF50447 3 83 1.41E-17 T 10-03-2017 IPR009000 Translation protein, beta-barrel domain CpPa04_RS09155 74fb732a971e91d23541b7de15242b40 94 SUPERFAMILY SSF52821 10 94 3.27E-26 T 10-03-2017 IPR001763 Rhodanese-like domain CpPa04_RS09155 74fb732a971e91d23541b7de15242b40 94 SMART SM00450 1 92 1.1E-15 T 10-03-2017 IPR001763 Rhodanese-like domain CpPa04_RS09155 74fb732a971e91d23541b7de15242b40 94 Pfam PF00581 Rhodanese-like domain 12 87 7.9E-9 T 10-03-2017 IPR001763 Rhodanese-like domain CpPa04_RS09155 74fb732a971e91d23541b7de15242b40 94 Gene3D G3DSA:3.40.250.10 11 94 1.1E-23 T 10-03-2017 IPR001763 Rhodanese-like domain CpPa04_RS01505 c58f31cc3528f17b8492e549d33b260b 322 Pfam PF00378 Enoyl-CoA hydratase/isomerase 40 317 2.6E-50 T 10-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CpPa04_RS01505 c58f31cc3528f17b8492e549d33b260b 322 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 159 179 - T 10-03-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CpPa04_RS01505 c58f31cc3528f17b8492e549d33b260b 322 SUPERFAMILY SSF52096 32 319 4.02E-72 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS01505 c58f31cc3528f17b8492e549d33b260b 322 Gene3D G3DSA:3.90.226.10 39 258 8.1E-65 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS01505 c58f31cc3528f17b8492e549d33b260b 322 Gene3D G3DSA:1.10.12.10 261 310 5.9E-28 T 10-03-2017 IPR014748 Crontonase, C-terminal CpPa04_RS01505 c58f31cc3528f17b8492e549d33b260b 322 TIGRFAM TIGR01929 menB: naphthoate synthase 27 318 5.7E-124 T 10-03-2017 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 CpPa04_RS01505 c58f31cc3528f17b8492e549d33b260b 322 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 18 321 52.069 T 10-03-2017 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 CpPa04_RS06695 2727a4d82b817fdf6a6e1e56d57f9150 229 SUPERFAMILY SSF53098 22 220 3.19E-60 T 10-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CpPa04_RS06695 2727a4d82b817fdf6a6e1e56d57f9150 229 Hamap MF_00052_B Ribonuclease HII [rnhB]. 31 212 34.61 T 10-03-2017 IPR022898 Ribonuclease HII GO:0004523 CpPa04_RS06695 2727a4d82b817fdf6a6e1e56d57f9150 229 Pfam PF01351 Ribonuclease HII 33 212 3.9E-38 T 10-03-2017 IPR024567 Ribonuclease HII/HIII domain CpPa04_RS06695 2727a4d82b817fdf6a6e1e56d57f9150 229 Gene3D G3DSA:3.30.420.10 32 173 3.7E-38 T 10-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CpPa04_RS00270 b71226875d8f0dc682c59ae675d936b6 545 Gene3D G3DSA:2.60.120.260 420 544 7.6E-24 T 10-03-2017 IPR008979 Galactose-binding domain-like CpPa04_RS00270 b71226875d8f0dc682c59ae675d936b6 545 SUPERFAMILY SSF52833 256 399 1.43E-28 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS00270 b71226875d8f0dc682c59ae675d936b6 545 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 9 190 2.9E-12 T 10-03-2017 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CpPa04_RS00270 b71226875d8f0dc682c59ae675d936b6 545 Pfam PF00578 AhpC/TSA family 257 375 4.1E-11 T 10-03-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CpPa04_RS00270 b71226875d8f0dc682c59ae675d936b6 545 Gene3D G3DSA:3.40.30.10 189 210 1.7E-40 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS00270 b71226875d8f0dc682c59ae675d936b6 545 Gene3D G3DSA:3.40.30.10 250 401 1.7E-40 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS04270 aef1cf543f683b1bc4c19e2f379f1aca 216 SUPERFAMILY SSF55821 4 208 1.92E-57 T 10-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain CpPa04_RS04270 aef1cf543f683b1bc4c19e2f379f1aca 216 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 12 208 1.1E-58 T 10-03-2017 IPR006070 YrdC-like domain GO:0003725 CpPa04_RS04270 aef1cf543f683b1bc4c19e2f379f1aca 216 Pfam PF01300 Telomere recombination 23 197 1.0E-46 T 10-03-2017 IPR006070 YrdC-like domain GO:0003725 CpPa04_RS04270 aef1cf543f683b1bc4c19e2f379f1aca 216 Gene3D G3DSA:3.90.870.10 4 209 3.5E-65 T 10-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain CpPa04_RS02410 6d5f7bc53a5f41905d35e5fc8aa36705 533 SUPERFAMILY SSF55957 423 527 2.49E-9 T 10-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02410 6d5f7bc53a5f41905d35e5fc8aa36705 533 SUPERFAMILY SSF53738 285 433 9.03E-19 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02410 6d5f7bc53a5f41905d35e5fc8aa36705 533 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 186 293 5.6E-20 T 10-03-2017 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02410 6d5f7bc53a5f41905d35e5fc8aa36705 533 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 55 166 4.9E-29 T 10-03-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02410 6d5f7bc53a5f41905d35e5fc8aa36705 533 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 125 134 - T 10-03-2017 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02410 6d5f7bc53a5f41905d35e5fc8aa36705 533 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 277 292 2.2E-9 T 10-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02410 6d5f7bc53a5f41905d35e5fc8aa36705 533 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 124 138 2.2E-9 T 10-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02410 6d5f7bc53a5f41905d35e5fc8aa36705 533 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 210 229 2.2E-9 T 10-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02410 6d5f7bc53a5f41905d35e5fc8aa36705 533 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 306 427 2.0E-11 T 10-03-2017 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02410 6d5f7bc53a5f41905d35e5fc8aa36705 533 Gene3D G3DSA:3.40.120.10 2 189 4.5E-43 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02410 6d5f7bc53a5f41905d35e5fc8aa36705 533 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 482 516 3.9E-5 T 10-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02410 6d5f7bc53a5f41905d35e5fc8aa36705 533 SUPERFAMILY SSF53738 184 293 1.45E-19 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02410 6d5f7bc53a5f41905d35e5fc8aa36705 533 Gene3D G3DSA:3.30.310.50 441 526 1.9E-10 T 10-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02410 6d5f7bc53a5f41905d35e5fc8aa36705 533 Gene3D G3DSA:3.40.120.10 211 288 2.6E-18 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02410 6d5f7bc53a5f41905d35e5fc8aa36705 533 SUPERFAMILY SSF53738 4 195 8.54E-32 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02410 6d5f7bc53a5f41905d35e5fc8aa36705 533 Gene3D G3DSA:3.40.120.10 289 433 5.2E-24 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS10185 0120f09d15bf479804b86ce3e3ced75e 212 Gene3D G3DSA:3.40.50.2300 1 128 3.6E-29 T 10-03-2017 CpPa04_RS10185 0120f09d15bf479804b86ce3e3ced75e 212 Gene3D G3DSA:1.10.10.10 129 211 3.2E-27 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS10185 0120f09d15bf479804b86ce3e3ced75e 212 Pfam PF00072 Response regulator receiver domain 4 124 8.4E-19 T 10-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CpPa04_RS10185 0120f09d15bf479804b86ce3e3ced75e 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 1.8E-12 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS10185 0120f09d15bf479804b86ce3e3ced75e 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 1.8E-12 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS10185 0120f09d15bf479804b86ce3e3ced75e 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 1.8E-12 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS10185 0120f09d15bf479804b86ce3e3ced75e 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS10185 0120f09d15bf479804b86ce3e3ced75e 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 8.8E-19 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS10185 0120f09d15bf479804b86ce3e3ced75e 212 SMART SM00448 2 123 8.2E-21 T 10-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CpPa04_RS10185 0120f09d15bf479804b86ce3e3ced75e 212 SMART SM00421 149 206 6.9E-21 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS10185 0120f09d15bf479804b86ce3e3ced75e 212 SUPERFAMILY SSF52172 1 142 1.71E-26 T 10-03-2017 IPR011006 CheY-like superfamily CpPa04_RS10185 0120f09d15bf479804b86ce3e3ced75e 212 SUPERFAMILY SSF46894 140 211 5.1E-21 T 10-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CpPa04_RS04290 77104310c12e1eaf9e360479cece748a 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 25 79 5.1E-22 T 10-03-2017 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CpPa04_RS04290 77104310c12e1eaf9e360479cece748a 79 Gene3D G3DSA:1.20.20.10 18 79 1.2E-25 T 10-03-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 CpPa04_RS04290 77104310c12e1eaf9e360479cece748a 79 SUPERFAMILY SSF81333 20 79 1.83E-18 T 10-03-2017 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CpPa04_RS04290 77104310c12e1eaf9e360479cece748a 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 45 66 - T 10-03-2017 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210 CpPa04_RS04290 77104310c12e1eaf9e360479cece748a 79 Pfam PF00137 ATP synthase subunit C 20 79 3.5E-13 T 10-03-2017 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CpPa04_RS04290 77104310c12e1eaf9e360479cece748a 79 PRINTS PR00124 ATP synthase C subunit signature 38 53 3.7E-19 T 10-03-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 CpPa04_RS04290 77104310c12e1eaf9e360479cece748a 79 PRINTS PR00124 ATP synthase C subunit signature 17 36 3.7E-19 T 10-03-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 CpPa04_RS04290 77104310c12e1eaf9e360479cece748a 79 PRINTS PR00124 ATP synthase C subunit signature 55 79 3.7E-19 T 10-03-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 CpPa04_RS04290 77104310c12e1eaf9e360479cece748a 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 11 79 13.705 T 10-03-2017 CpPa04_RS07785 b2063b38e3323809472af40f781520e3 611 ProSitePatterns PS00455 Putative AMP-binding domain signature. 194 205 - T 10-03-2017 IPR020845 AMP-binding, conserved site CpPa04_RS07785 b2063b38e3323809472af40f781520e3 611 Pfam PF00501 AMP-binding enzyme 42 478 4.4E-90 T 10-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CpPa04_RS07785 b2063b38e3323809472af40f781520e3 611 SUPERFAMILY SSF56801 17 299 1.44E-107 T 10-03-2017 CpPa04_RS07785 b2063b38e3323809472af40f781520e3 611 SUPERFAMILY SSF56801 350 609 1.44E-107 T 10-03-2017 CpPa04_RS07785 b2063b38e3323809472af40f781520e3 611 Gene3D G3DSA:3.40.50.980 24 200 5.6E-31 T 10-03-2017 CpPa04_RS07785 b2063b38e3323809472af40f781520e3 611 Gene3D G3DSA:2.30.38.10 416 472 1.5E-16 T 10-03-2017 CpPa04_RS07785 b2063b38e3323809472af40f781520e3 611 Gene3D G3DSA:3.30.300.30 476 599 9.9E-7 T 10-03-2017 CpPa04_RS07785 b2063b38e3323809472af40f781520e3 611 Gene3D G3DSA:3.40.50.980 347 410 1.8E-25 T 10-03-2017 CpPa04_RS07785 b2063b38e3323809472af40f781520e3 611 Gene3D G3DSA:3.40.50.980 201 294 1.8E-25 T 10-03-2017 CpPa04_RS01950 087102f39c73f8bb8b473edf135e4e99 415 Pfam PF13224 Domain of unknown function (DUF4032) 233 394 1.7E-67 T 10-03-2017 IPR025111 Domain of unknown function DUF4032 CpPa04_RS01950 087102f39c73f8bb8b473edf135e4e99 415 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 62 182 3.6E-7 T 10-03-2017 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 Reactome: R-HSA-6782315|Reactome: R-HSA-6804756 CpPa04_RS01950 087102f39c73f8bb8b473edf135e4e99 415 SUPERFAMILY SSF56112 37 164 8.39E-8 T 10-03-2017 IPR011009 Protein kinase-like domain CpPa04_RS01785 fea87a9bfecf1112411b025c81758077 217 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 19 204 5.5E-69 T 10-03-2017 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS01785 fea87a9bfecf1112411b025c81758077 217 Gene3D G3DSA:3.40.1370.10 60 208 9.3E-50 T 10-03-2017 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CpPa04_RS01785 fea87a9bfecf1112411b025c81758077 217 SUPERFAMILY SSF52166 5 208 6.54E-72 T 10-03-2017 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CpPa04_RS01785 fea87a9bfecf1112411b025c81758077 217 Pfam PF00573 Ribosomal protein L4/L1 family 19 206 1.2E-62 T 10-03-2017 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 CpPa04_RS01785 fea87a9bfecf1112411b025c81758077 217 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 11 210 32.812 T 10-03-2017 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS02285 42f476a32d28d719ba7115c23d8471fe 281 Gene3D G3DSA:3.40.192.10 7 138 2.1E-46 T 10-03-2017 CpPa04_RS02285 42f476a32d28d719ba7115c23d8471fe 281 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 281 35.205 T 10-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CpPa04_RS02285 42f476a32d28d719ba7115c23d8471fe 281 Gene3D G3DSA:3.40.50.720 139 263 5.3E-43 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS02285 42f476a32d28d719ba7115c23d8471fe 281 SUPERFAMILY SSF53223 2 121 8.63E-40 T 10-03-2017 CpPa04_RS02285 42f476a32d28d719ba7115c23d8471fe 281 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 279 1.7E-58 T 10-03-2017 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CpPa04_RS02285 42f476a32d28d719ba7115c23d8471fe 281 SUPERFAMILY SSF51735 122 279 5.09E-39 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS02285 42f476a32d28d719ba7115c23d8471fe 281 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 1.5E-68 T 10-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CpPa04_RS02285 42f476a32d28d719ba7115c23d8471fe 281 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 1.5E-68 T 10-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CpPa04_RS02285 42f476a32d28d719ba7115c23d8471fe 281 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 205 234 1.5E-68 T 10-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CpPa04_RS02285 42f476a32d28d719ba7115c23d8471fe 281 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 1.5E-68 T 10-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CpPa04_RS02285 42f476a32d28d719ba7115c23d8471fe 281 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 1.5E-68 T 10-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CpPa04_RS02285 42f476a32d28d719ba7115c23d8471fe 281 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 1.5E-68 T 10-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CpPa04_RS02285 42f476a32d28d719ba7115c23d8471fe 281 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 120 1.9E-38 T 10-03-2017 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CpPa04_RS07625 f68dee5010cdca275a9989ba5a992d12 269 SUPERFAMILY SSF56601 3 258 8.03E-48 T 10-03-2017 IPR012338 Beta-lactamase/transpeptidase-like CpPa04_RS07625 f68dee5010cdca275a9989ba5a992d12 269 Gene3D G3DSA:3.40.710.10 4 252 1.7E-39 T 10-03-2017 IPR012338 Beta-lactamase/transpeptidase-like CpPa04_RS07625 f68dee5010cdca275a9989ba5a992d12 269 Pfam PF00144 Beta-lactamase 32 250 1.2E-29 T 10-03-2017 IPR001466 Beta-lactamase-related CpPa04_RS07320 f486e0d2a1d103e282b6ea2d55fa444b 348 SMART SM00729 71 277 6.0E-18 T 10-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CpPa04_RS07320 f486e0d2a1d103e282b6ea2d55fa444b 348 TIGRFAM TIGR00510 lipA: lipoyl synthase 18 302 7.4E-94 T 10-03-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CpPa04_RS07320 f486e0d2a1d103e282b6ea2d55fa444b 348 PIRSF PIRSF005963 2 318 3.3E-119 T 10-03-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CpPa04_RS07320 f486e0d2a1d103e282b6ea2d55fa444b 348 SUPERFAMILY SSF102114 36 307 6.93E-63 T 10-03-2017 CpPa04_RS07320 f486e0d2a1d103e282b6ea2d55fa444b 348 Hamap MF_00206 Lipoyl synthase [lipA]. 1 307 132.794 T 10-03-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CpPa04_RS07320 f486e0d2a1d103e282b6ea2d55fa444b 348 Gene3D G3DSA:3.20.20.70 38 299 1.5E-64 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS07320 f486e0d2a1d103e282b6ea2d55fa444b 348 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 26 60 1.4E-6 T 10-03-2017 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CpPa04_RS07320 f486e0d2a1d103e282b6ea2d55fa444b 348 Pfam PF04055 Radical SAM superfamily 80 234 3.0E-14 T 10-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CpPa04_RS03715 c673485bb320ced2820a0dd6330ba333 209 Gene3D G3DSA:1.10.357.10 3 205 2.9E-19 T 10-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CpPa04_RS03715 c673485bb320ced2820a0dd6330ba333 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 3.7E-5 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS03715 c673485bb320ced2820a0dd6330ba333 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 3.7E-5 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS03715 c673485bb320ced2820a0dd6330ba333 209 SUPERFAMILY SSF46689 8 59 7.56E-14 T 10-03-2017 IPR009057 Homeodomain-like GO:0003677 CpPa04_RS03715 c673485bb320ced2820a0dd6330ba333 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 57 8.7E-11 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS03715 c673485bb320ced2820a0dd6330ba333 209 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 10-03-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CpPa04_RS05990 10db54c0676d10942282f5bca2746fda 243 ProDom PD017229 LIGASE SYNTHASE BIOTIN MAGNESIUM PIMELOYL-COA 6-CARBOXYHEXANOATE--COA BIOSYNTHESIS 6-CARBOXYHEXANOATE-COA BIOW COA 2 208 5.0E-44 T 10-03-2017 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 CpPa04_RS05990 10db54c0676d10942282f5bca2746fda 243 Hamap MF_00668 6-carboxyhexanoate--CoA ligase [bioW]. 3 243 50.742 T 10-03-2017 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 CpPa04_RS05990 10db54c0676d10942282f5bca2746fda 243 Pfam PF03744 6-carboxyhexanoate--CoA ligase 4 242 3.7E-80 T 10-03-2017 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 CpPa04_RS01305 2489f7106f3d62df2206fff6272ae4fd 379 SUPERFAMILY SSF56176 30 203 3.32E-36 T 10-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CpPa04_RS01305 2489f7106f3d62df2206fff6272ae4fd 379 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 236 375 5.2E-38 T 10-03-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS01305 2489f7106f3d62df2206fff6272ae4fd 379 SUPERFAMILY SSF56194 234 377 1.19E-33 T 10-03-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS01305 2489f7106f3d62df2206fff6272ae4fd 379 Gene3D G3DSA:3.30.465.10 248 264 9.5E-46 T 10-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CpPa04_RS01305 2489f7106f3d62df2206fff6272ae4fd 379 Gene3D G3DSA:3.30.465.10 99 210 9.5E-46 T 10-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CpPa04_RS01305 2489f7106f3d62df2206fff6272ae4fd 379 Pfam PF01565 FAD binding domain 42 172 5.6E-23 T 10-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CpPa04_RS01305 2489f7106f3d62df2206fff6272ae4fd 379 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 32 374 2.1E-43 T 10-03-2017 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS01305 2489f7106f3d62df2206fff6272ae4fd 379 Gene3D G3DSA:3.30.43.10 29 92 2.9E-11 T 10-03-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CpPa04_RS01305 2489f7106f3d62df2206fff6272ae4fd 379 Gene3D G3DSA:3.90.78.10 265 378 1.2E-43 T 10-03-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS01305 2489f7106f3d62df2206fff6272ae4fd 379 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 379 70.841 T 10-03-2017 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS01430 783c09e4977d0b55fe206c8a0afb0014 278 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 162 273 1.0E-10 T 10-03-2017 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CpPa04_RS01430 783c09e4977d0b55fe206c8a0afb0014 278 Gene3D G3DSA:3.40.50.720 1 139 5.8E-32 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS01430 783c09e4977d0b55fe206c8a0afb0014 278 PIRSF PIRSF000103 1 278 1.2E-61 T 10-03-2017 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CpPa04_RS01430 783c09e4977d0b55fe206c8a0afb0014 278 SUPERFAMILY SSF48179 160 274 1.93E-14 T 10-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CpPa04_RS01430 783c09e4977d0b55fe206c8a0afb0014 278 SUPERFAMILY SSF51735 1 138 4.27E-30 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS01430 783c09e4977d0b55fe206c8a0afb0014 278 Gene3D G3DSA:1.10.1040.10 161 274 4.0E-21 T 10-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CpPa04_RS01430 783c09e4977d0b55fe206c8a0afb0014 278 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 141 7.7E-26 T 10-03-2017 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CpPa04_RS06605 1a778b688a0453b786e2cf31357b3f9a 391 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 22 373 33.554 T 10-03-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CpPa04_RS06605 1a778b688a0453b786e2cf31357b3f9a 391 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 24 366 1.5E-127 T 10-03-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CpPa04_RS06605 1a778b688a0453b786e2cf31357b3f9a 391 SUPERFAMILY SSF51717 51 225 1.73E-12 T 10-03-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CpPa04_RS06605 1a778b688a0453b786e2cf31357b3f9a 391 PIRSF PIRSF004640 18 378 2.8E-144 T 10-03-2017 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CpPa04_RS06605 1a778b688a0453b786e2cf31357b3f9a 391 Pfam PF04551 GcpE protein 27 367 2.7E-133 T 10-03-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CpPa04_RS06605 1a778b688a0453b786e2cf31357b3f9a 391 SUPERFAMILY SSF56014 283 366 3.6E-12 T 10-03-2017 CpPa04_RS04400 31d1d70fd2f602062e31c3180358e42c 372 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 1 361 36.193 T 10-03-2017 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 CpPa04_RS04400 31d1d70fd2f602062e31c3180358e42c 372 Gene3D G3DSA:2.30.30.280 215 277 3.7E-17 T 10-03-2017 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 CpPa04_RS04400 31d1d70fd2f602062e31c3180358e42c 372 Gene3D G3DSA:2.40.30.10 281 366 1.9E-15 T 10-03-2017 CpPa04_RS04400 31d1d70fd2f602062e31c3180358e42c 372 SUPERFAMILY SSF52402 1 244 9.48E-47 T 10-03-2017 CpPa04_RS04400 31d1d70fd2f602062e31c3180358e42c 372 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 360 2.4E-95 T 10-03-2017 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 CpPa04_RS04400 31d1d70fd2f602062e31c3180358e42c 372 Gene3D G3DSA:3.40.50.620 1 211 1.8E-74 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS04400 31d1d70fd2f602062e31c3180358e42c 372 Pfam PF03054 tRNA methyl transferase 1 360 1.3E-116 T 10-03-2017 CpPa04_RS06350 bf54f1ba78b61bf1887ea14efaaca0b6 512 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 17 437 4.7E-134 T 10-03-2017 CpPa04_RS06350 bf54f1ba78b61bf1887ea14efaaca0b6 512 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 16 456 1.3E-145 T 10-03-2017 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 CpPa04_RS06350 bf54f1ba78b61bf1887ea14efaaca0b6 512 SMART SM00729 158 383 1.2E-59 T 10-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CpPa04_RS06350 bf54f1ba78b61bf1887ea14efaaca0b6 512 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 162 182 - T 10-03-2017 IPR020612 Methylthiotransferase, conserved site GO:0051539 CpPa04_RS06350 bf54f1ba78b61bf1887ea14efaaca0b6 512 Pfam PF00919 Uncharacterized protein family UPF0004 18 115 2.4E-27 T 10-03-2017 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 CpPa04_RS06350 bf54f1ba78b61bf1887ea14efaaca0b6 512 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 15 464 65.468 T 10-03-2017 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 CpPa04_RS06350 bf54f1ba78b61bf1887ea14efaaca0b6 512 SUPERFAMILY SSF102114 145 387 3.27E-57 T 10-03-2017 CpPa04_RS06350 bf54f1ba78b61bf1887ea14efaaca0b6 512 Gene3D G3DSA:3.80.30.20 160 394 1.1E-80 T 10-03-2017 IPR023404 Radical SAM, alpha/beta horseshoe CpPa04_RS06350 bf54f1ba78b61bf1887ea14efaaca0b6 512 Pfam PF04055 Radical SAM superfamily 162 339 4.4E-29 T 10-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CpPa04_RS04545 9208ce46b68e90630f1a2d483dbb96ca 531 SUPERFAMILY SSF51735 104 284 1.89E-57 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS04545 9208ce46b68e90630f1a2d483dbb96ca 531 SUPERFAMILY SSF143548 324 452 3.66E-28 T 10-03-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CpPa04_RS04545 9208ce46b68e90630f1a2d483dbb96ca 531 Gene3D G3DSA:3.40.50.720 121 285 5.8E-63 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS04545 9208ce46b68e90630f1a2d483dbb96ca 531 Gene3D G3DSA:3.40.50.720 6 120 2.9E-40 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS04545 9208ce46b68e90630f1a2d483dbb96ca 531 Gene3D G3DSA:3.30.1330.90 322 450 7.6E-35 T 10-03-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CpPa04_RS04545 9208ce46b68e90630f1a2d483dbb96ca 531 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 9 522 4.6E-184 T 10-03-2017 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 CpPa04_RS04545 9208ce46b68e90630f1a2d483dbb96ca 531 SUPERFAMILY SSF52283 6 138 2.65E-36 T 10-03-2017 CpPa04_RS04545 9208ce46b68e90630f1a2d483dbb96ca 531 Gene3D G3DSA:3.30.70.260 451 518 9.6E-11 T 10-03-2017 CpPa04_RS04545 9208ce46b68e90630f1a2d483dbb96ca 531 SUPERFAMILY SSF55021 457 519 7.91E-10 T 10-03-2017 CpPa04_RS04545 9208ce46b68e90630f1a2d483dbb96ca 531 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 284 2.3E-61 T 10-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CpPa04_RS04545 9208ce46b68e90630f1a2d483dbb96ca 531 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 316 9.6E-36 T 10-03-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CpPa04_RS04545 9208ce46b68e90630f1a2d483dbb96ca 531 Pfam PF01842 ACT domain 459 517 9.4E-7 T 10-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 CpPa04_RS04545 9208ce46b68e90630f1a2d483dbb96ca 531 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 10-03-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CpPa04_RS06405 9f86c4941d504e6a040d5c2bff0173d5 97 SUPERFAMILY SSF54909 1 91 8.85E-14 T 10-03-2017 IPR011008 Dimeric alpha-beta barrel CpPa04_RS06405 9f86c4941d504e6a040d5c2bff0173d5 97 Pfam PF03795 YCII-related domain 4 84 2.1E-7 T 10-03-2017 IPR005545 YCII-related CpPa04_RS06405 9f86c4941d504e6a040d5c2bff0173d5 97 Gene3D G3DSA:3.30.70.1060 1 91 7.6E-10 T 10-03-2017 CpPa04_RS05725 ab4df5b50fc0fcabe771fe51fb3a51c5 191 Hamap MF_00328 Guanylate kinase [gmk]. 6 191 34.438 T 10-03-2017 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CpPa04_RS05725 ab4df5b50fc0fcabe771fe51fb3a51c5 191 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 8 187 2.6E-64 T 10-03-2017 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CpPa04_RS05725 ab4df5b50fc0fcabe771fe51fb3a51c5 191 SUPERFAMILY SSF52540 6 188 2.15E-56 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05725 ab4df5b50fc0fcabe771fe51fb3a51c5 191 Gene3D G3DSA:3.40.50.300 4 48 4.7E-4 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05725 ab4df5b50fc0fcabe771fe51fb3a51c5 191 Gene3D G3DSA:3.30.63.10 49 90 7.8E-24 T 10-03-2017 CpPa04_RS05725 ab4df5b50fc0fcabe771fe51fb3a51c5 191 SMART SM00072 7 191 6.1E-60 T 10-03-2017 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CpPa04_RS05725 ab4df5b50fc0fcabe771fe51fb3a51c5 191 ProSitePatterns PS00856 Guanylate kinase-like signature. 42 59 - T 10-03-2017 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CpPa04_RS05725 ab4df5b50fc0fcabe771fe51fb3a51c5 191 Pfam PF00625 Guanylate kinase 8 187 2.2E-38 T 10-03-2017 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CpPa04_RS05725 ab4df5b50fc0fcabe771fe51fb3a51c5 191 Gene3D G3DSA:3.40.50.300 91 188 2.2E-36 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08885 2dee827da4157d34eaba49ae57bddf56 393 Pfam PF00756 Putative esterase 118 383 2.3E-26 T 10-03-2017 IPR000801 Putative esterase Reactome: R-HSA-156590 CpPa04_RS08885 2dee827da4157d34eaba49ae57bddf56 393 Gene3D G3DSA:3.40.50.1820 110 392 1.6E-68 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS08885 2dee827da4157d34eaba49ae57bddf56 393 SUPERFAMILY SSF53474 112 388 4.1E-26 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS04655 198c6f5ac011386d6609dd8d09f5d66c 326 Pfam PF00586 AIR synthase related protein, N-terminal domain 32 144 3.4E-20 T 10-03-2017 IPR016188 PurM-like, N-terminal domain CpPa04_RS04655 198c6f5ac011386d6609dd8d09f5d66c 326 Gene3D G3DSA:3.30.1330.10 8 145 4.0E-36 T 10-03-2017 IPR016188 PurM-like, N-terminal domain CpPa04_RS04655 198c6f5ac011386d6609dd8d09f5d66c 326 SUPERFAMILY SSF56042 153 285 5.23E-23 T 10-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain CpPa04_RS04655 198c6f5ac011386d6609dd8d09f5d66c 326 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 26 284 2.3E-60 T 10-03-2017 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CpPa04_RS04655 198c6f5ac011386d6609dd8d09f5d66c 326 SUPERFAMILY SSF55326 10 144 1.17E-26 T 10-03-2017 CpPa04_RS04655 198c6f5ac011386d6609dd8d09f5d66c 326 PIRSF PIRSF005303 8 326 4.2E-69 T 10-03-2017 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CpPa04_RS04655 198c6f5ac011386d6609dd8d09f5d66c 326 Pfam PF02769 AIR synthase related protein, C-terminal domain 158 257 1.8E-5 T 10-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain CpPa04_RS04655 198c6f5ac011386d6609dd8d09f5d66c 326 Gene3D G3DSA:3.90.650.10 156 323 2.9E-28 T 10-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain CpPa04_RS07870 5a029a6addfb5211100113b555004793 316 SUPERFAMILY SSF161098 92 302 1.22E-23 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS07870 5a029a6addfb5211100113b555004793 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 314 2.4E-35 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS07870 5a029a6addfb5211100113b555004793 316 Gene3D G3DSA:1.10.3720.10 93 304 2.5E-21 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS06900 52ce1dacde17416418dd63ff8a6a2607 430 Pfam PF07690 Major Facilitator Superfamily 3 349 3.0E-30 T 10-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CpPa04_RS06900 52ce1dacde17416418dd63ff8a6a2607 430 SUPERFAMILY SSF103473 3 413 6.93E-45 T 10-03-2017 IPR020846 Major facilitator superfamily domain CpPa04_RS06900 52ce1dacde17416418dd63ff8a6a2607 430 Gene3D G3DSA:1.20.1250.20 239 411 3.7E-15 T 10-03-2017 CpPa04_RS06900 52ce1dacde17416418dd63ff8a6a2607 430 Gene3D G3DSA:1.20.1250.20 3 184 8.6E-23 T 10-03-2017 CpPa04_RS07760 30e470c3610f35f84e226345a980c106 256 SUPERFAMILY SSF88697 22 78 2.26E-6 T 10-03-2017 IPR015947 PUA-like domain CpPa04_RS07760 30e470c3610f35f84e226345a980c106 256 PIRSF PIRSF015601 15 256 2.5E-44 T 10-03-2017 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CpPa04_RS07760 30e470c3610f35f84e226345a980c106 256 Pfam PF04452 RNA methyltransferase 29 249 3.8E-56 T 10-03-2017 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CpPa04_RS07760 30e470c3610f35f84e226345a980c106 256 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 29 253 1.3E-34 T 10-03-2017 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CpPa04_RS07760 30e470c3610f35f84e226345a980c106 256 SUPERFAMILY SSF75217 87 256 5.76E-42 T 10-03-2017 IPR029028 Alpha/beta knot methyltransferases CpPa04_RS07760 30e470c3610f35f84e226345a980c106 256 Gene3D G3DSA:3.40.1280.10 24 256 1.3E-59 T 10-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CpPa04_RS03870 d2b903de6ca28468d389525e7f18b5b2 319 Gene3D G3DSA:1.10.3720.10 109 314 7.7E-26 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS03870 d2b903de6ca28468d389525e7f18b5b2 319 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 39 79 9.7E-6 T 10-03-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CpPa04_RS03870 d2b903de6ca28468d389525e7f18b5b2 319 SUPERFAMILY SSF161098 110 300 9.94E-25 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS03870 d2b903de6ca28468d389525e7f18b5b2 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 317 1.2E-28 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS06240 9b852ce7bb20a4ec3a0ebbf016dc976e 151 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 150 72.003 T 10-03-2017 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CpPa04_RS06240 9b852ce7bb20a4ec3a0ebbf016dc976e 151 Pfam PF03477 ATP cone domain 47 132 1.7E-15 T 10-03-2017 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CpPa04_RS06240 9b852ce7bb20a4ec3a0ebbf016dc976e 151 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 2 142 1.7E-46 T 10-03-2017 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CpPa04_RS04295 e57636b3e92a56e34c3526f44ce95795 188 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 35 180 1.8E-27 T 10-03-2017 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 CpPa04_RS04295 e57636b3e92a56e34c3526f44ce95795 188 Pfam PF00430 ATP synthase B/B' CF(0) 30 159 6.1E-28 T 10-03-2017 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CpPa04_RS04295 e57636b3e92a56e34c3526f44ce95795 188 SUPERFAMILY SSF81573 86 144 2.88E-12 T 10-03-2017 IPR028987 F-type ATP synthase subunit B-like, membrane domain CpPa04_RS04295 e57636b3e92a56e34c3526f44ce95795 188 Gene3D G3DSA:1.20.5.620 86 144 1.5E-14 T 10-03-2017 IPR028987 F-type ATP synthase subunit B-like, membrane domain CpPa04_RS04295 e57636b3e92a56e34c3526f44ce95795 188 Hamap MF_01398 ATP synthase subunit b [atpF]. 14 180 12.553 T 10-03-2017 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CpPa04_RS05735 19b742f65ed138d539eede24a70bc355 279 SMART SM00934 21 269 1.9E-35 T 10-03-2017 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CpPa04_RS05735 19b742f65ed138d539eede24a70bc355 279 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 6 277 31.888 T 10-03-2017 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686 CpPa04_RS05735 19b742f65ed138d539eede24a70bc355 279 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 8 269 1.1E-80 T 10-03-2017 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686 CpPa04_RS05735 19b742f65ed138d539eede24a70bc355 279 Gene3D G3DSA:3.20.20.70 9 270 8.9E-60 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS05735 19b742f65ed138d539eede24a70bc355 279 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 95 108 - T 10-03-2017 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CpPa04_RS05735 19b742f65ed138d539eede24a70bc355 279 SUPERFAMILY SSF51366 10 270 3.68E-61 T 10-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CpPa04_RS05735 19b742f65ed138d539eede24a70bc355 279 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 21 268 3.1E-40 T 10-03-2017 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CpPa04_RS04380 f97d10a54772ee5f90ae8cbc4be1aa86 264 SUPERFAMILY SSF52402 4 259 2.37E-55 T 10-03-2017 CpPa04_RS04380 f97d10a54772ee5f90ae8cbc4be1aa86 264 Gene3D G3DSA:3.40.50.620 4 262 2.0E-68 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS04380 f97d10a54772ee5f90ae8cbc4be1aa86 264 SMART SM00893 23 216 7.1E-37 T 10-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CpPa04_RS04380 f97d10a54772ee5f90ae8cbc4be1aa86 264 Pfam PF01012 Electron transfer flavoprotein domain 24 210 1.3E-36 T 10-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CpPa04_RS04380 f97d10a54772ee5f90ae8cbc4be1aa86 264 PIRSF PIRSF000090 2 264 1.0E-71 T 10-03-2017 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105 CpPa04_RS02625 e45772d401c3a86671680e1fa112e6ec 578 SMART SM00909 203 286 0.007 T 10-03-2017 IPR019606 GerMN domain CpPa04_RS02625 e45772d401c3a86671680e1fa112e6ec 578 Pfam PF10647 Lipoprotein LpqB beta-propeller domain 318 569 2.4E-49 T 10-03-2017 IPR018910 Lipoprotein LpqB, beta-propeller domain, C-terminal CpPa04_RS02625 e45772d401c3a86671680e1fa112e6ec 578 Hamap MF_01373 Lipoprotein LpqB [lpqB]. 2 578 24.221 T 10-03-2017 IPR023959 Lipoprotein LpqB CpPa04_RS10305 6a1b9edeeb7d856093c488e8f74f9d52 654 SUPERFAMILY SSF48208 247 646 1.63E-97 T 10-03-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 CpPa04_RS10305 6a1b9edeeb7d856093c488e8f74f9d52 654 Gene3D G3DSA:1.50.10.10 277 648 3.6E-88 T 10-03-2017 IPR012341 Six-hairpin glycosidase GO:0003824 CpPa04_RS10305 6a1b9edeeb7d856093c488e8f74f9d52 654 Pfam PF00723 Glycosyl hydrolases family 15 278 593 5.3E-51 T 10-03-2017 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: R-HSA-70221 CpPa04_RS03670 7d9009feba8b9614075ab95b6d337baf 173 PIRSF PIRSF006092 1 163 1.3E-31 T 10-03-2017 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CpPa04_RS03670 7d9009feba8b9614075ab95b6d337baf 173 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 124 140 - T 10-03-2017 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CpPa04_RS03670 7d9009feba8b9614075ab95b6d337baf 173 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 20 50 - T 10-03-2017 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CpPa04_RS03670 7d9009feba8b9614075ab95b6d337baf 173 Pfam PF03449 Transcription elongation factor, N-terminal 8 74 1.9E-20 T 10-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CpPa04_RS03670 7d9009feba8b9614075ab95b6d337baf 173 Gene3D G3DSA:3.10.50.30 83 167 3.4E-16 T 10-03-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CpPa04_RS03670 7d9009feba8b9614075ab95b6d337baf 173 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 160 24.693 T 10-03-2017 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CpPa04_RS03670 7d9009feba8b9614075ab95b6d337baf 173 Gene3D G3DSA:1.10.287.180 5 74 9.1E-22 T 10-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CpPa04_RS03670 7d9009feba8b9614075ab95b6d337baf 173 SUPERFAMILY SSF46557 6 74 5.49E-19 T 10-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CpPa04_RS03670 7d9009feba8b9614075ab95b6d337baf 173 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 160 6.4E-15 T 10-03-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CpPa04_RS03670 7d9009feba8b9614075ab95b6d337baf 173 SUPERFAMILY SSF54534 83 160 8.89E-12 T 10-03-2017 CpPa04_RS03900 741a396c1f1643f448da6bc03dbfac8f 636 Pfam PF00009 Elongation factor Tu GTP binding domain 6 218 5.3E-50 T 10-03-2017 CpPa04_RS03900 741a396c1f1643f448da6bc03dbfac8f 636 SUPERFAMILY SSF54980 329 415 2.3E-10 T 10-03-2017 IPR009022 Elongation factor G, III-V domain CpPa04_RS03900 741a396c1f1643f448da6bc03dbfac8f 636 Gene3D G3DSA:3.30.70.240 429 509 4.5E-25 T 10-03-2017 IPR000640 Translation elongation factor EFG, V domain CpPa04_RS03900 741a396c1f1643f448da6bc03dbfac8f 636 Gene3D G3DSA:3.30.70.870 331 428 2.3E-32 T 10-03-2017 CpPa04_RS03900 741a396c1f1643f448da6bc03dbfac8f 636 Pfam PF00679 Elongation factor G C-terminus 424 507 2.8E-19 T 10-03-2017 IPR000640 Translation elongation factor EFG, V domain CpPa04_RS03900 741a396c1f1643f448da6bc03dbfac8f 636 Pfam PF03144 Elongation factor Tu domain 2 242 316 7.4E-10 T 10-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CpPa04_RS03900 741a396c1f1643f448da6bc03dbfac8f 636 SUPERFAMILY SSF50447 171 327 4.86E-31 T 10-03-2017 IPR009000 Translation protein, beta-barrel domain CpPa04_RS03900 741a396c1f1643f448da6bc03dbfac8f 636 PRINTS PR00315 GTP-binding elongation factor signature 79 89 3.7E-15 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS03900 741a396c1f1643f448da6bc03dbfac8f 636 PRINTS PR00315 GTP-binding elongation factor signature 95 106 3.7E-15 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS03900 741a396c1f1643f448da6bc03dbfac8f 636 PRINTS PR00315 GTP-binding elongation factor signature 8 21 3.7E-15 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS03900 741a396c1f1643f448da6bc03dbfac8f 636 PRINTS PR00315 GTP-binding elongation factor signature 52 60 3.7E-15 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS03900 741a396c1f1643f448da6bc03dbfac8f 636 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.7E-15 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS03900 741a396c1f1643f448da6bc03dbfac8f 636 SUPERFAMILY SSF54980 426 540 6.71E-23 T 10-03-2017 IPR009022 Elongation factor G, III-V domain CpPa04_RS03900 741a396c1f1643f448da6bc03dbfac8f 636 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 6 625 1.8E-255 T 10-03-2017 IPR006298 GTP-binding protein TypA GO:0005525 CpPa04_RS03900 741a396c1f1643f448da6bc03dbfac8f 636 Gene3D G3DSA:3.40.50.300 5 221 4.6E-53 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03900 741a396c1f1643f448da6bc03dbfac8f 636 Gene3D G3DSA:2.40.50.250 510 604 1.6E-35 T 10-03-2017 CpPa04_RS03900 741a396c1f1643f448da6bc03dbfac8f 636 SUPERFAMILY SSF52540 4 224 3.48E-47 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03900 741a396c1f1643f448da6bc03dbfac8f 636 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 160 1.0E-22 T 10-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CpPa04_RS03900 741a396c1f1643f448da6bc03dbfac8f 636 Gene3D G3DSA:2.40.30.10 224 330 5.2E-27 T 10-03-2017 CpPa04_RS07375 9c7b324a1cc228dc5e0cb0e511c08916 195 Gene3D G3DSA:1.10.10.10 137 194 2.9E-11 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS07375 9c7b324a1cc228dc5e0cb0e511c08916 195 Pfam PF08281 Sigma-70, region 4 138 185 1.2E-10 T 10-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS07375 9c7b324a1cc228dc5e0cb0e511c08916 195 SUPERFAMILY SSF88659 130 194 8.22E-11 T 10-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS07300 6da108f587b6adc147e32156b21724a1 377 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 278 368 3.5E-25 T 10-03-2017 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CpPa04_RS07300 6da108f587b6adc147e32156b21724a1 377 SUPERFAMILY SSF103025 5 287 1.31E-90 T 10-03-2017 CpPa04_RS07300 6da108f587b6adc147e32156b21724a1 377 PIRSF PIRSF006487 1 377 1.1E-91 T 10-03-2017 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 CpPa04_RS07300 6da108f587b6adc147e32156b21724a1 377 SUPERFAMILY SSF101790 292 375 2.45E-25 T 10-03-2017 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CpPa04_RS07300 6da108f587b6adc147e32156b21724a1 377 Pfam PF01571 Aminomethyltransferase folate-binding domain 10 270 1.8E-85 T 10-03-2017 IPR006222 Glycine cleavage T-protein-like, N-terminal CpPa04_RS07300 6da108f587b6adc147e32156b21724a1 377 Gene3D G3DSA:3.30.1360.120 5 55 1.6E-51 T 10-03-2017 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 CpPa04_RS07300 6da108f587b6adc147e32156b21724a1 377 Gene3D G3DSA:3.30.1360.120 144 248 1.6E-51 T 10-03-2017 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 CpPa04_RS07300 6da108f587b6adc147e32156b21724a1 377 Gene3D G3DSA:2.40.30.110 293 376 1.8E-29 T 10-03-2017 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CpPa04_RS07300 6da108f587b6adc147e32156b21724a1 377 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 6 373 2.5E-102 T 10-03-2017 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 CpPa04_RS07300 6da108f587b6adc147e32156b21724a1 377 Gene3D G3DSA:3.30.70.1400 56 143 1.2E-26 T 10-03-2017 CpPa04_RS07300 6da108f587b6adc147e32156b21724a1 377 Hamap MF_00259 Aminomethyltransferase [gcvT]. 4 374 41.368 T 10-03-2017 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CpPa04_RS08430 ca6b31b2567a06936c78a53caf3a2fca 165 Pfam PF13302 Acetyltransferase (GNAT) domain 15 144 1.2E-21 T 10-03-2017 IPR000182 GNAT domain GO:0008080 CpPa04_RS08430 ca6b31b2567a06936c78a53caf3a2fca 165 Gene3D G3DSA:3.40.630.30 5 160 3.7E-37 T 10-03-2017 IPR016181 Acyl-CoA N-acyltransferase CpPa04_RS08430 ca6b31b2567a06936c78a53caf3a2fca 165 SUPERFAMILY SSF55729 5 157 1.66E-32 T 10-03-2017 IPR016181 Acyl-CoA N-acyltransferase CpPa04_RS05335 c0d629e68082a7d32b8415e78e84a478 1199 SUPERFAMILY SSF47644 648 731 1.07E-23 T 10-03-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CpPa04_RS05335 c0d629e68082a7d32b8415e78e84a478 1199 Gene3D G3DSA:3.40.50.280 736 868 1.8E-45 T 10-03-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CpPa04_RS05335 c0d629e68082a7d32b8415e78e84a478 1199 Pfam PF02310 B12 binding domain 739 856 3.1E-19 T 10-03-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CpPa04_RS05335 c0d629e68082a7d32b8415e78e84a478 1199 Pfam PF00809 Pterin binding enzyme 355 591 5.0E-46 T 10-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CpPa04_RS05335 c0d629e68082a7d32b8415e78e84a478 1199 Pfam PF02574 Homocysteine S-methyltransferase 21 313 7.2E-68 T 10-03-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CpPa04_RS05335 c0d629e68082a7d32b8415e78e84a478 1199 Gene3D G3DSA:1.10.1240.10 645 729 2.2E-31 T 10-03-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CpPa04_RS05335 c0d629e68082a7d32b8415e78e84a478 1199 Pfam PF02607 B12 binding domain 653 725 3.5E-24 T 10-03-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CpPa04_RS05335 c0d629e68082a7d32b8415e78e84a478 1199 Gene3D G3DSA:3.10.196.10 968 1199 3.6E-60 T 10-03-2017 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CpPa04_RS05335 c0d629e68082a7d32b8415e78e84a478 1199 SUPERFAMILY SSF52242 733 870 2.22E-38 T 10-03-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CpPa04_RS05335 c0d629e68082a7d32b8415e78e84a478 1199 SMART SM01018 650 732 1.4E-39 T 10-03-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CpPa04_RS05335 c0d629e68082a7d32b8415e78e84a478 1199 Gene3D G3DSA:3.20.20.20 360 622 9.6E-88 T 10-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CpPa04_RS05335 c0d629e68082a7d32b8415e78e84a478 1199 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 985 1199 4.0E-30 T 10-03-2017 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CpPa04_RS05335 c0d629e68082a7d32b8415e78e84a478 1199 Gene3D G3DSA:3.20.20.330 7 359 1.6E-107 T 10-03-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CpPa04_RS05335 c0d629e68082a7d32b8415e78e84a478 1199 SUPERFAMILY SSF51717 352 623 2.49E-76 T 10-03-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CpPa04_RS05335 c0d629e68082a7d32b8415e78e84a478 1199 SUPERFAMILY SSF82282 10 394 3.14E-103 T 10-03-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CpPa04_RS05335 c0d629e68082a7d32b8415e78e84a478 1199 PIRSF PIRSF000381 6 1199 0.0 T 10-03-2017 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CpPa04_RS05335 c0d629e68082a7d32b8415e78e84a478 1199 SUPERFAMILY SSF56507 908 1199 1.7E-82 T 10-03-2017 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CpPa04_RS05335 c0d629e68082a7d32b8415e78e84a478 1199 TIGRFAM TIGR02082 metH: methionine synthase 17 1199 0.0 T 10-03-2017 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CpPa04_RS01935 1bf0f1ed3a15c7ddb87d82c872282b66 292 SUPERFAMILY SSF161098 16 292 8.69E-59 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS01935 1bf0f1ed3a15c7ddb87d82c872282b66 292 Gene3D G3DSA:1.10.3720.10 11 280 1.4E-57 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS01935 1bf0f1ed3a15c7ddb87d82c872282b66 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 283 1.5E-15 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS02140 55fc733d069e31e167a7a153e064202e 98 Pfam PF00166 Chaperonin 10 Kd subunit 5 96 8.1E-34 T 10-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CpPa04_RS02140 55fc733d069e31e167a7a153e064202e 98 SMART SM00883 5 96 1.4E-52 T 10-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CpPa04_RS02140 55fc733d069e31e167a7a153e064202e 98 Hamap MF_00580 10 kDa chaperonin [groS]. 5 97 24.99 T 10-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CpPa04_RS02140 55fc733d069e31e167a7a153e064202e 98 ProSitePatterns PS00681 Chaperonins cpn10 signature. 6 30 - T 10-03-2017 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 CpPa04_RS02140 55fc733d069e31e167a7a153e064202e 98 Gene3D G3DSA:2.30.33.40 5 97 1.2E-36 T 10-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CpPa04_RS02140 55fc733d069e31e167a7a153e064202e 98 SUPERFAMILY SSF50129 4 97 1.11E-33 T 10-03-2017 IPR011032 GroES-like CpPa04_RS02140 55fc733d069e31e167a7a153e064202e 98 PRINTS PR00297 10kDa chaperonin signature 83 96 2.5E-30 T 10-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CpPa04_RS02140 55fc733d069e31e167a7a153e064202e 98 PRINTS PR00297 10kDa chaperonin signature 62 74 2.5E-30 T 10-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CpPa04_RS02140 55fc733d069e31e167a7a153e064202e 98 PRINTS PR00297 10kDa chaperonin signature 6 21 2.5E-30 T 10-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CpPa04_RS02140 55fc733d069e31e167a7a153e064202e 98 PRINTS PR00297 10kDa chaperonin signature 28 49 2.5E-30 T 10-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CpPa04_RS05430 6dca0401c2975180fa99ef98ee1c2e68 735 Gene3D G3DSA:3.20.20.240 30 556 1.4E-240 T 10-03-2017 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CpPa04_RS05430 6dca0401c2975180fa99ef98ee1c2e68 735 Pfam PF01642 Methylmalonyl-CoA mutase 32 554 4.4E-226 T 10-03-2017 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CpPa04_RS05430 6dca0401c2975180fa99ef98ee1c2e68 735 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 30 561 1.3E-270 T 10-03-2017 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CpPa04_RS05430 6dca0401c2975180fa99ef98ee1c2e68 735 Gene3D G3DSA:3.40.50.280 561 723 4.6E-65 T 10-03-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CpPa04_RS05430 6dca0401c2975180fa99ef98ee1c2e68 735 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 596 724 2.1E-59 T 10-03-2017 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CpPa04_RS05430 6dca0401c2975180fa99ef98ee1c2e68 735 Pfam PF02310 B12 binding domain 599 714 5.4E-12 T 10-03-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CpPa04_RS05430 6dca0401c2975180fa99ef98ee1c2e68 735 SUPERFAMILY SSF51703 23 556 5.23E-208 T 10-03-2017 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CpPa04_RS05430 6dca0401c2975180fa99ef98ee1c2e68 735 SUPERFAMILY SSF52242 560 726 6.8E-53 T 10-03-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CpPa04_RS08770 6fdfbafa7c9ab65cbb0681e4f05a2f31 353 Pfam PF00586 AIR synthase related protein, N-terminal domain 64 164 1.1E-15 T 10-03-2017 IPR016188 PurM-like, N-terminal domain CpPa04_RS08770 6fdfbafa7c9ab65cbb0681e4f05a2f31 353 Gene3D G3DSA:3.90.650.10 172 345 4.5E-64 T 10-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain CpPa04_RS08770 6fdfbafa7c9ab65cbb0681e4f05a2f31 353 Gene3D G3DSA:3.30.1330.10 24 169 3.2E-53 T 10-03-2017 IPR016188 PurM-like, N-terminal domain CpPa04_RS08770 6fdfbafa7c9ab65cbb0681e4f05a2f31 353 SUPERFAMILY SSF55326 8 169 1.5E-44 T 10-03-2017 CpPa04_RS08770 6fdfbafa7c9ab65cbb0681e4f05a2f31 353 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 347 41.841 T 10-03-2017 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CpPa04_RS08770 6fdfbafa7c9ab65cbb0681e4f05a2f31 353 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 340 2.9E-33 T 10-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain CpPa04_RS08770 6fdfbafa7c9ab65cbb0681e4f05a2f31 353 SUPERFAMILY SSF56042 172 339 2.24E-52 T 10-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain CpPa04_RS08770 6fdfbafa7c9ab65cbb0681e4f05a2f31 353 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 336 2.6E-136 T 10-03-2017 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CpPa04_RS00485 ae478a0c6eb9427d7343ba6ce36795b5 623 Gene3D G3DSA:3.40.390.10 254 369 3.6E-102 T 10-03-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CpPa04_RS00485 ae478a0c6eb9427d7343ba6ce36795b5 623 Gene3D G3DSA:3.40.390.10 411 623 3.6E-102 T 10-03-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CpPa04_RS00485 ae478a0c6eb9427d7343ba6ce36795b5 623 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 430 442 1.6E-20 T 10-03-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CpPa04_RS00485 ae478a0c6eb9427d7343ba6ce36795b5 623 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 451 467 1.6E-20 T 10-03-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CpPa04_RS00485 ae478a0c6eb9427d7343ba6ce36795b5 623 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 412 424 1.6E-20 T 10-03-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CpPa04_RS00485 ae478a0c6eb9427d7343ba6ce36795b5 623 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 525 536 1.6E-20 T 10-03-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CpPa04_RS00485 ae478a0c6eb9427d7343ba6ce36795b5 623 SUPERFAMILY SSF55486 9 623 5.13E-176 T 10-03-2017 CpPa04_RS00485 ae478a0c6eb9427d7343ba6ce36795b5 623 Pfam PF05649 Peptidase family M13 9 366 4.2E-83 T 10-03-2017 IPR008753 Peptidase M13, N-terminal domain GO:0006508 CpPa04_RS00485 ae478a0c6eb9427d7343ba6ce36795b5 623 Pfam PF01431 Peptidase family M13 420 620 9.3E-64 T 10-03-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CpPa04_RS03620 073961f12d05a4ec1822f0f6406bd2d9 257 Gene3D G3DSA:1.10.530.10 176 248 2.3E-9 T 10-03-2017 CpPa04_RS03620 073961f12d05a4ec1822f0f6406bd2d9 257 Pfam PF13406 Transglycosylase SLT domain 178 231 1.1E-7 T 10-03-2017 IPR031304 Transglycosylase SLT domain 2 CpPa04_RS03620 073961f12d05a4ec1822f0f6406bd2d9 257 SUPERFAMILY SSF53955 39 255 1.58E-36 T 10-03-2017 IPR023346 Lysozyme-like domain CpPa04_RS06360 b3fb40b3cc3860cf454d91f1f3b0e19e 369 Pfam PF00154 recA bacterial DNA recombination protein 19 280 2.4E-143 T 10-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CpPa04_RS06360 b3fb40b3cc3860cf454d91f1f3b0e19e 369 SUPERFAMILY SSF52540 15 279 2.25E-66 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06360 b3fb40b3cc3860cf454d91f1f3b0e19e 369 Hamap MF_00268 Protein RecA [recA]. 17 341 51.932 T 10-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CpPa04_RS06360 b3fb40b3cc3860cf454d91f1f3b0e19e 369 PRINTS PR00142 RecA protein signature 105 134 9.0E-83 T 10-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CpPa04_RS06360 b3fb40b3cc3860cf454d91f1f3b0e19e 369 PRINTS PR00142 RecA protein signature 177 206 9.0E-83 T 10-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CpPa04_RS06360 b3fb40b3cc3860cf454d91f1f3b0e19e 369 PRINTS PR00142 RecA protein signature 255 284 9.0E-83 T 10-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CpPa04_RS06360 b3fb40b3cc3860cf454d91f1f3b0e19e 369 PRINTS PR00142 RecA protein signature 222 250 9.0E-83 T 10-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CpPa04_RS06360 b3fb40b3cc3860cf454d91f1f3b0e19e 369 PRINTS PR00142 RecA protein signature 139 168 9.0E-83 T 10-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CpPa04_RS06360 b3fb40b3cc3860cf454d91f1f3b0e19e 369 PRINTS PR00142 RecA protein signature 309 326 9.0E-83 T 10-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CpPa04_RS06360 b3fb40b3cc3860cf454d91f1f3b0e19e 369 Gene3D G3DSA:3.30.250.10 280 338 1.9E-25 T 10-03-2017 IPR023400 DNA recombination and repair protein RecA, C-terminal CpPa04_RS06360 b3fb40b3cc3860cf454d91f1f3b0e19e 369 SMART SM00382 69 240 3.3E-9 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS06360 b3fb40b3cc3860cf454d91f1f3b0e19e 369 SUPERFAMILY SSF54752 280 336 1.31E-18 T 10-03-2017 IPR023400 DNA recombination and repair protein RecA, C-terminal CpPa04_RS06360 b3fb40b3cc3860cf454d91f1f3b0e19e 369 Gene3D G3DSA:3.40.50.300 38 279 2.2E-84 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06360 b3fb40b3cc3860cf454d91f1f3b0e19e 369 ProSitePatterns PS00321 recA signature. 225 233 - T 10-03-2017 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 CpPa04_RS06360 b3fb40b3cc3860cf454d91f1f3b0e19e 369 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 16 334 2.5E-169 T 10-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CpPa04_RS05845 d72fa4a92aaefaafb838d489ce71ae44 443 Pfam PF01636 Phosphotransferase enzyme family 95 282 2.5E-6 T 10-03-2017 IPR002575 Aminoglycoside phosphotransferase CpPa04_RS05845 d72fa4a92aaefaafb838d489ce71ae44 443 SUPERFAMILY SSF56112 30 332 5.98E-24 T 10-03-2017 IPR011009 Protein kinase-like domain CpPa04_RS05845 d72fa4a92aaefaafb838d489ce71ae44 443 Gene3D G3DSA:3.90.1200.10 134 301 4.6E-9 T 10-03-2017 CpPa04_RS10115 0fe62460547b08d6f049bb437b1c96b1 316 PRINTS PR00086 L-lactate dehydrogenase signature 33 57 3.1E-45 T 10-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CpPa04_RS10115 0fe62460547b08d6f049bb437b1c96b1 316 PRINTS PR00086 L-lactate dehydrogenase signature 8 32 3.1E-45 T 10-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CpPa04_RS10115 0fe62460547b08d6f049bb437b1c96b1 316 PRINTS PR00086 L-lactate dehydrogenase signature 174 187 3.1E-45 T 10-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CpPa04_RS10115 0fe62460547b08d6f049bb437b1c96b1 316 PRINTS PR00086 L-lactate dehydrogenase signature 120 140 3.1E-45 T 10-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CpPa04_RS10115 0fe62460547b08d6f049bb437b1c96b1 316 PRINTS PR00086 L-lactate dehydrogenase signature 144 162 3.1E-45 T 10-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CpPa04_RS10115 0fe62460547b08d6f049bb437b1c96b1 316 SUPERFAMILY SSF51735 4 146 5.08E-51 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS10115 0fe62460547b08d6f049bb437b1c96b1 316 Gene3D G3DSA:3.40.50.720 7 149 4.8E-51 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS10115 0fe62460547b08d6f049bb437b1c96b1 316 Gene3D G3DSA:3.90.110.10 150 312 1.3E-58 T 10-03-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CpPa04_RS10115 0fe62460547b08d6f049bb437b1c96b1 316 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 8 146 1.7E-45 T 10-03-2017 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 CpPa04_RS10115 0fe62460547b08d6f049bb437b1c96b1 316 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 149 312 3.0E-32 T 10-03-2017 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 CpPa04_RS10115 0fe62460547b08d6f049bb437b1c96b1 316 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 6 314 43.705 T 10-03-2017 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 CpPa04_RS10115 0fe62460547b08d6f049bb437b1c96b1 316 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 176 182 - T 10-03-2017 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 CpPa04_RS10115 0fe62460547b08d6f049bb437b1c96b1 316 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 11 307 3.9E-125 T 10-03-2017 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 CpPa04_RS10115 0fe62460547b08d6f049bb437b1c96b1 316 PIRSF PIRSF000102 4 314 3.9E-104 T 10-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CpPa04_RS10115 0fe62460547b08d6f049bb437b1c96b1 316 SUPERFAMILY SSF56327 147 312 1.21E-53 T 10-03-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CpPa04_RS08820 6a762df3a592c41b443d045ce15cc57c 708 Pfam PF00326 Prolyl oligopeptidase family 488 702 3.7E-61 T 10-03-2017 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CpPa04_RS08820 6a762df3a592c41b443d045ce15cc57c 708 Gene3D G3DSA:3.40.50.1820 440 694 4.8E-30 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS08820 6a762df3a592c41b443d045ce15cc57c 708 SUPERFAMILY SSF50993 5 437 3.66E-95 T 10-03-2017 CpPa04_RS08820 6a762df3a592c41b443d045ce15cc57c 708 SUPERFAMILY SSF53474 444 682 2.64E-39 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS08820 6a762df3a592c41b443d045ce15cc57c 708 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 10 430 1.3E-100 T 10-03-2017 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 CpPa04_RS08820 6a762df3a592c41b443d045ce15cc57c 708 Gene3D G3DSA:2.130.10.120 77 432 1.8E-116 T 10-03-2017 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 CpPa04_RS08820 6a762df3a592c41b443d045ce15cc57c 708 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 527 546 5.3E-52 T 10-03-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CpPa04_RS08820 6a762df3a592c41b443d045ce15cc57c 708 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 616 631 5.3E-52 T 10-03-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CpPa04_RS08820 6a762df3a592c41b443d045ce15cc57c 708 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 473 491 5.3E-52 T 10-03-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CpPa04_RS08820 6a762df3a592c41b443d045ce15cc57c 708 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 557 577 5.3E-52 T 10-03-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CpPa04_RS08820 6a762df3a592c41b443d045ce15cc57c 708 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 499 523 5.3E-52 T 10-03-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CpPa04_RS08820 6a762df3a592c41b443d045ce15cc57c 708 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 634 656 5.3E-52 T 10-03-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CpPa04_RS03175 6b2ffee55a62498c315fb209aaca7989 258 Gene3D G3DSA:1.10.3720.10 66 254 1.9E-13 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS03175 6b2ffee55a62498c315fb209aaca7989 258 SUPERFAMILY SSF161098 68 230 6.93E-13 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS03175 6b2ffee55a62498c315fb209aaca7989 258 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 252 6.2E-13 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS03105 9d9fe5f5689115b32f007690c80960c1 228 Gene3D G3DSA:3.90.226.10 15 225 3.1E-46 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS03105 9d9fe5f5689115b32f007690c80960c1 228 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 125 145 - T 10-03-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CpPa04_RS03105 9d9fe5f5689115b32f007690c80960c1 228 SUPERFAMILY SSF52096 15 227 2.37E-44 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS03105 9d9fe5f5689115b32f007690c80960c1 228 Pfam PF00378 Enoyl-CoA hydratase/isomerase 28 201 1.5E-27 T 10-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CpPa04_RS06950 bef0651931c0025e388b44f0e53a7b7c 453 Gene3D G3DSA:3.40.50.10190 363 442 1.6E-9 T 10-03-2017 IPR001357 BRCT domain CpPa04_RS06950 bef0651931c0025e388b44f0e53a7b7c 453 Gene3D G3DSA:3.30.420.10 103 270 2.9E-38 T 10-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CpPa04_RS06950 bef0651931c0025e388b44f0e53a7b7c 453 Pfam PF00929 Exonuclease 109 262 2.0E-14 T 10-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III CpPa04_RS06950 bef0651931c0025e388b44f0e53a7b7c 453 SUPERFAMILY SSF52113 362 442 1.45E-9 T 10-03-2017 IPR001357 BRCT domain CpPa04_RS06950 bef0651931c0025e388b44f0e53a7b7c 453 SMART SM00479 105 272 6.6E-12 T 10-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III CpPa04_RS06950 bef0651931c0025e388b44f0e53a7b7c 453 SUPERFAMILY SSF53098 105 271 8.18E-36 T 10-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CpPa04_RS09045 72f9b555270bf432d28fc12f938d839e 261 SUPERFAMILY SSF53474 4 260 4.82E-35 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS09045 72f9b555270bf432d28fc12f938d839e 261 Gene3D G3DSA:3.40.50.1820 4 259 1.9E-35 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS09045 72f9b555270bf432d28fc12f938d839e 261 Pfam PF12146 Serine aminopeptidase, S33 11 245 2.2E-49 T 10-03-2017 IPR022742 Serine aminopeptidase, S33 CpPa04_RS08165 2361a4fead6d7633c776ac9b5ce524bb 202 PIRSF PIRSF012637 1 202 1.0E-69 T 10-03-2017 IPR016601 Uncharacterised conserved protein UCP012637 CpPa04_RS02650 5dd700b63d329c08b8f8fa0cdc4fb77c 136 Gene3D G3DSA:3.40.50.1000 18 131 1.0E-28 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS02650 5dd700b63d329c08b8f8fa0cdc4fb77c 136 SUPERFAMILY SSF56784 23 124 4.37E-20 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS02650 5dd700b63d329c08b8f8fa0cdc4fb77c 136 Pfam PF00702 haloacid dehalogenase-like hydrolase 24 109 6.2E-7 T 10-03-2017 CpPa04_RS02650 5dd700b63d329c08b8f8fa0cdc4fb77c 136 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 64 115 1.4E-9 T 10-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CpPa04_RS06490 5350c1e5187917c565922920c2881e78 145 ProSitePatterns PS01319 Ribosome-binding factor A signature. 79 100 - T 10-03-2017 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 CpPa04_RS06490 5350c1e5187917c565922920c2881e78 145 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 100 4.0E-42 T 10-03-2017 IPR000238 Ribosome-binding factor A GO:0006364 CpPa04_RS06490 5350c1e5187917c565922920c2881e78 145 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 2 120 18.068 T 10-03-2017 IPR000238 Ribosome-binding factor A GO:0006364 CpPa04_RS06490 5350c1e5187917c565922920c2881e78 145 SUPERFAMILY SSF89919 2 116 2.35E-27 T 10-03-2017 IPR023799 Ribosome-binding factor A domain CpPa04_RS06490 5350c1e5187917c565922920c2881e78 145 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 114 1.5E-18 T 10-03-2017 IPR000238 Ribosome-binding factor A GO:0006364 CpPa04_RS06490 5350c1e5187917c565922920c2881e78 145 Pfam PF02033 Ribosome-binding factor A 6 113 2.3E-24 T 10-03-2017 IPR000238 Ribosome-binding factor A GO:0006364 CpPa04_RS06490 5350c1e5187917c565922920c2881e78 145 Gene3D G3DSA:3.30.300.20 4 121 3.1E-33 T 10-03-2017 IPR015946 K homology domain-like, alpha/beta CpPa04_RS01655 57613efc05c9861346c225c07ccbbc3c 1178 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 251 856 2.1E-298 T 10-03-2017 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS01655 57613efc05c9861346c225c07ccbbc3c 1178 SUPERFAMILY SSF64484 37 1148 0.0 T 10-03-2017 CpPa04_RS01655 57613efc05c9861346c225c07ccbbc3c 1178 Pfam PF10385 RNA polymerase beta subunit external 1 domain 516 582 6.8E-22 T 10-03-2017 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS01655 57613efc05c9861346c225c07ccbbc3c 1178 Gene3D G3DSA:2.40.50.150 747 878 7.1E-57 T 10-03-2017 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS01655 57613efc05c9861346c225c07ccbbc3c 1178 ProSitePatterns PS01166 RNA polymerases beta chain signature. 882 894 - T 10-03-2017 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS01655 57613efc05c9861346c225c07ccbbc3c 1178 Pfam PF04560 RNA polymerase Rpb2, domain 7 1065 1139 8.0E-27 T 10-03-2017 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS01655 57613efc05c9861346c225c07ccbbc3c 1178 Pfam PF04563 RNA polymerase beta subunit 51 424 5.7E-24 T 10-03-2017 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS01655 57613efc05c9861346c225c07ccbbc3c 1178 Gene3D G3DSA:2.30.150.10 517 582 7.3E-23 T 10-03-2017 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS01655 57613efc05c9861346c225c07ccbbc3c 1178 Pfam PF00562 RNA polymerase Rpb2, domain 6 645 1063 2.6E-158 T 10-03-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS01655 57613efc05c9861346c225c07ccbbc3c 1178 Gene3D G3DSA:3.90.1110.10 184 354 1.6E-59 T 10-03-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS01655 57613efc05c9861346c225c07ccbbc3c 1178 Pfam PF04565 RNA polymerase Rpb2, domain 3 438 506 8.3E-28 T 10-03-2017 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS01655 57613efc05c9861346c225c07ccbbc3c 1178 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 38 1141 12.171 T 10-03-2017 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS01655 57613efc05c9861346c225c07ccbbc3c 1178 Gene3D G3DSA:2.40.270.10 712 739 4.8E-75 T 10-03-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS01655 57613efc05c9861346c225c07ccbbc3c 1178 Gene3D G3DSA:2.40.270.10 879 1041 4.8E-75 T 10-03-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS01655 57613efc05c9861346c225c07ccbbc3c 1178 Gene3D G3DSA:2.40.50.100 641 711 1.6E-26 T 10-03-2017 CpPa04_RS01655 57613efc05c9861346c225c07ccbbc3c 1178 Gene3D G3DSA:3.90.1100.10 368 516 7.7E-144 T 10-03-2017 CpPa04_RS01655 57613efc05c9861346c225c07ccbbc3c 1178 Gene3D G3DSA:3.90.1100.10 45 182 7.7E-144 T 10-03-2017 CpPa04_RS01655 57613efc05c9861346c225c07ccbbc3c 1178 Gene3D G3DSA:3.90.1100.10 585 639 7.7E-144 T 10-03-2017 CpPa04_RS01655 57613efc05c9861346c225c07ccbbc3c 1178 Pfam PF04561 RNA polymerase Rpb2, domain 2 182 379 2.8E-24 T 10-03-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS06225 98f7a28e6fdcfdfb4f28d1a2b56fbfb5 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.5E-7 T 10-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CpPa04_RS06225 98f7a28e6fdcfdfb4f28d1a2b56fbfb5 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.5E-7 T 10-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CpPa04_RS06225 98f7a28e6fdcfdfb4f28d1a2b56fbfb5 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.5E-7 T 10-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CpPa04_RS06225 98f7a28e6fdcfdfb4f28d1a2b56fbfb5 313 Gene3D G3DSA:1.10.10.10 8 85 1.9E-24 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS06225 98f7a28e6fdcfdfb4f28d1a2b56fbfb5 313 Gene3D G3DSA:3.40.190.10 183 273 1.2E-24 T 10-03-2017 CpPa04_RS06225 98f7a28e6fdcfdfb4f28d1a2b56fbfb5 313 SUPERFAMILY SSF53850 96 306 2.54E-39 T 10-03-2017 CpPa04_RS06225 98f7a28e6fdcfdfb4f28d1a2b56fbfb5 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 1.1E-19 T 10-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CpPa04_RS06225 98f7a28e6fdcfdfb4f28d1a2b56fbfb5 313 SUPERFAMILY SSF46785 4 117 3.06E-21 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS06225 98f7a28e6fdcfdfb4f28d1a2b56fbfb5 313 Pfam PF03466 LysR substrate binding domain 94 297 3.1E-45 T 10-03-2017 IPR005119 LysR, substrate-binding CpPa04_RS06225 98f7a28e6fdcfdfb4f28d1a2b56fbfb5 313 Gene3D G3DSA:3.40.190.10 97 182 6.6E-21 T 10-03-2017 CpPa04_RS10670 927a0ceb42d159038cb436373b323b24 393 Pfam PF01471 Putative peptidoglycan binding domain 12 80 1.2E-7 T 10-03-2017 IPR002477 Peptidoglycan binding-like CpPa04_RS10670 927a0ceb42d159038cb436373b323b24 393 Pfam PF01471 Putative peptidoglycan binding domain 102 156 5.3E-14 T 10-03-2017 IPR002477 Peptidoglycan binding-like CpPa04_RS10670 927a0ceb42d159038cb436373b323b24 393 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 190 367 9.4E-27 T 10-03-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CpPa04_RS10670 927a0ceb42d159038cb436373b323b24 393 SUPERFAMILY SSF47090 4 82 2.35E-8 T 10-03-2017 IPR002477 Peptidoglycan binding-like CpPa04_RS10670 927a0ceb42d159038cb436373b323b24 393 SMART SM00646 252 367 8.5E-16 T 10-03-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CpPa04_RS10670 927a0ceb42d159038cb436373b323b24 393 Gene3D G3DSA:1.10.101.10 102 157 7.3E-17 T 10-03-2017 IPR002477 Peptidoglycan binding-like CpPa04_RS10670 927a0ceb42d159038cb436373b323b24 393 Gene3D G3DSA:1.10.101.10 4 87 3.5E-11 T 10-03-2017 IPR002477 Peptidoglycan binding-like CpPa04_RS10670 927a0ceb42d159038cb436373b323b24 393 SUPERFAMILY SSF47090 102 157 1.94E-15 T 10-03-2017 IPR002477 Peptidoglycan binding-like CpPa04_RS10670 927a0ceb42d159038cb436373b323b24 393 SUPERFAMILY SSF53187 187 370 1.98E-34 T 10-03-2017 CpPa04_RS10670 927a0ceb42d159038cb436373b323b24 393 Gene3D G3DSA:3.40.630.40 187 370 1.3E-33 T 10-03-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CpPa04_RS03230 10ff451ce04167d28b104c3b617d54cf 1623 SMART SM00487 16 243 1.9E-30 T 10-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CpPa04_RS03230 10ff451ce04167d28b104c3b617d54cf 1623 Gene3D G3DSA:3.40.50.300 5 233 1.2E-48 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03230 10ff451ce04167d28b104c3b617d54cf 1623 Pfam PF00270 DEAD/DEAH box helicase 21 218 1.3E-26 T 10-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CpPa04_RS03230 10ff451ce04167d28b104c3b617d54cf 1623 Gene3D G3DSA:3.40.50.300 372 485 3.2E-26 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03230 10ff451ce04167d28b104c3b617d54cf 1623 Gene3D G3DSA:3.40.50.300 313 339 3.2E-26 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03230 10ff451ce04167d28b104c3b617d54cf 1623 Pfam PF00271 Helicase conserved C-terminal domain 316 441 1.0E-11 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS03230 10ff451ce04167d28b104c3b617d54cf 1623 SUPERFAMILY SSF52540 285 339 3.44E-44 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03230 10ff451ce04167d28b104c3b617d54cf 1623 SUPERFAMILY SSF52540 34 220 3.44E-44 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03230 10ff451ce04167d28b104c3b617d54cf 1623 SUPERFAMILY SSF52540 372 446 3.44E-44 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03230 10ff451ce04167d28b104c3b617d54cf 1623 SMART SM00490 331 441 1.3E-11 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS03230 10ff451ce04167d28b104c3b617d54cf 1623 Pfam PF08494 DEAD/H associated 716 903 7.5E-76 T 10-03-2017 IPR013701 DEAD/H associated GO:0005524|GO:0016818 CpPa04_RS05025 97ef8448a4fec86df6e5ff91459394ac 1129 Pfam PF04183 IucA / IucC family 690 934 6.4E-55 T 10-03-2017 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 CpPa04_RS05025 97ef8448a4fec86df6e5ff91459394ac 1129 Pfam PF04183 IucA / IucC family 145 382 3.2E-46 T 10-03-2017 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 CpPa04_RS05025 97ef8448a4fec86df6e5ff91459394ac 1129 Pfam PF06276 Ferric iron reductase FhuF-like transporter 413 534 4.9E-15 T 10-03-2017 IPR022770 Ferric iron reductase FhuF domain CpPa04_RS05025 97ef8448a4fec86df6e5ff91459394ac 1129 Pfam PF06276 Ferric iron reductase FhuF-like transporter 951 1109 2.1E-13 T 10-03-2017 IPR022770 Ferric iron reductase FhuF domain CpPa04_RS00300 556e7f7719f7cdaa95c0d19a57d0d5ef 445 SUPERFAMILY SSF53187 8 197 9.71E-44 T 10-03-2017 CpPa04_RS00300 556e7f7719f7cdaa95c0d19a57d0d5ef 445 SUPERFAMILY SSF53187 350 442 9.71E-44 T 10-03-2017 CpPa04_RS00300 556e7f7719f7cdaa95c0d19a57d0d5ef 445 Pfam PF07687 Peptidase dimerisation domain 194 338 2.2E-16 T 10-03-2017 IPR011650 Peptidase M20, dimerisation domain CpPa04_RS00300 556e7f7719f7cdaa95c0d19a57d0d5ef 445 Pfam PF01546 Peptidase family M20/M25/M40 80 439 1.3E-32 T 10-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CpPa04_RS00300 556e7f7719f7cdaa95c0d19a57d0d5ef 445 Gene3D G3DSA:3.40.630.10 375 443 8.9E-43 T 10-03-2017 CpPa04_RS00300 556e7f7719f7cdaa95c0d19a57d0d5ef 445 Gene3D G3DSA:3.40.630.10 10 206 8.9E-43 T 10-03-2017 CpPa04_RS00300 556e7f7719f7cdaa95c0d19a57d0d5ef 445 Gene3D G3DSA:3.30.70.360 285 341 3.8E-21 T 10-03-2017 IPR011650 Peptidase M20, dimerisation domain CpPa04_RS00300 556e7f7719f7cdaa95c0d19a57d0d5ef 445 Gene3D G3DSA:3.30.70.360 207 240 3.8E-21 T 10-03-2017 IPR011650 Peptidase M20, dimerisation domain CpPa04_RS00300 556e7f7719f7cdaa95c0d19a57d0d5ef 445 SUPERFAMILY SSF55031 287 341 2.39E-12 T 10-03-2017 IPR011650 Peptidase M20, dimerisation domain CpPa04_RS00300 556e7f7719f7cdaa95c0d19a57d0d5ef 445 SUPERFAMILY SSF55031 199 247 2.39E-12 T 10-03-2017 IPR011650 Peptidase M20, dimerisation domain CpPa04_RS04390 f4810af1016a83574283ea99a7afde5d 375 Pfam PF00266 Aminotransferase class-V 5 358 4.6E-50 T 10-03-2017 IPR000192 Aminotransferase class V domain CpPa04_RS04390 f4810af1016a83574283ea99a7afde5d 375 Gene3D G3DSA:3.40.640.10 28 239 5.4E-63 T 10-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CpPa04_RS04390 f4810af1016a83574283ea99a7afde5d 375 SUPERFAMILY SSF53383 5 367 3.7E-83 T 10-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase CpPa04_RS04390 f4810af1016a83574283ea99a7afde5d 375 PIRSF PIRSF005572 1 372 1.5E-109 T 10-03-2017 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CpPa04_RS04390 f4810af1016a83574283ea99a7afde5d 375 Gene3D G3DSA:3.90.1150.10 240 364 2.3E-36 T 10-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CpPa04_RS00670 78d309efbafbb24193213f08f528bd74 464 SUPERFAMILY SSF53383 93 463 4.03E-63 T 10-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase CpPa04_RS00670 78d309efbafbb24193213f08f528bd74 464 SMART SM00345 25 84 2.8E-13 T 10-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CpPa04_RS00670 78d309efbafbb24193213f08f528bd74 464 SUPERFAMILY SSF46785 14 86 2.2E-17 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS00670 78d309efbafbb24193213f08f528bd74 464 Gene3D G3DSA:3.40.640.10 144 351 5.1E-40 T 10-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CpPa04_RS00670 78d309efbafbb24193213f08f528bd74 464 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 2.2E-7 T 10-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CpPa04_RS00670 78d309efbafbb24193213f08f528bd74 464 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 2.2E-7 T 10-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CpPa04_RS00670 78d309efbafbb24193213f08f528bd74 464 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 84 2.7E-14 T 10-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CpPa04_RS00670 78d309efbafbb24193213f08f528bd74 464 Gene3D G3DSA:1.10.10.10 13 85 1.7E-21 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS09200 c0f7b3095d77a9a678d48f578406c302 546 SUPERFAMILY SSF48592 6 133 2.91E-73 T 10-03-2017 CpPa04_RS09200 c0f7b3095d77a9a678d48f578406c302 546 SUPERFAMILY SSF48592 409 524 2.91E-73 T 10-03-2017 CpPa04_RS09200 c0f7b3095d77a9a678d48f578406c302 546 Hamap MF_00600 60 kDa chaperonin [groL]. 1 544 39.754 T 10-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 CpPa04_RS09200 c0f7b3095d77a9a678d48f578406c302 546 Gene3D G3DSA:1.10.560.10 372 521 1.6E-36 T 10-03-2017 IPR027413 GroEL-like equatorial domain CpPa04_RS09200 c0f7b3095d77a9a678d48f578406c302 546 Gene3D G3DSA:1.10.560.10 6 190 1.4E-44 T 10-03-2017 IPR027413 GroEL-like equatorial domain CpPa04_RS09200 c0f7b3095d77a9a678d48f578406c302 546 SUPERFAMILY SSF54849 136 204 3.66E-20 T 10-03-2017 CpPa04_RS09200 c0f7b3095d77a9a678d48f578406c302 546 SUPERFAMILY SSF52029 190 379 1.17E-81 T 10-03-2017 IPR027409 GroEL-like apical domain CpPa04_RS09200 c0f7b3095d77a9a678d48f578406c302 546 ProSitePatterns PS00296 Chaperonins cpn60 signature. 408 419 - T 10-03-2017 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020 CpPa04_RS09200 c0f7b3095d77a9a678d48f578406c302 546 PRINTS PR00298 60kDa chaperonin signature 401 422 7.5E-70 T 10-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 CpPa04_RS09200 c0f7b3095d77a9a678d48f578406c302 546 PRINTS PR00298 60kDa chaperonin signature 271 294 7.5E-70 T 10-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 CpPa04_RS09200 c0f7b3095d77a9a678d48f578406c302 546 PRINTS PR00298 60kDa chaperonin signature 82 109 7.5E-70 T 10-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 CpPa04_RS09200 c0f7b3095d77a9a678d48f578406c302 546 PRINTS PR00298 60kDa chaperonin signature 26 52 7.5E-70 T 10-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 CpPa04_RS09200 c0f7b3095d77a9a678d48f578406c302 546 PRINTS PR00298 60kDa chaperonin signature 353 378 7.5E-70 T 10-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 CpPa04_RS09200 c0f7b3095d77a9a678d48f578406c302 546 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 528 7.3E-95 T 10-03-2017 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 CpPa04_RS09200 c0f7b3095d77a9a678d48f578406c302 546 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 529 1.5E-238 T 10-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 CpPa04_RS09200 c0f7b3095d77a9a678d48f578406c302 546 Gene3D G3DSA:3.50.7.10 191 371 1.7E-96 T 10-03-2017 IPR027409 GroEL-like apical domain CpPa04_RS02005 df5691f095b4765054967bcac51f12a2 201 Gene3D G3DSA:3.10.290.10 94 193 1.5E-28 T 10-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 CpPa04_RS02005 df5691f095b4765054967bcac51f12a2 201 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 201 34.019 T 10-03-2017 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CpPa04_RS02005 df5691f095b4765054967bcac51f12a2 201 ProSitePatterns PS00632 Ribosomal protein S4 signature. 89 113 - T 10-03-2017 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS02005 df5691f095b4765054967bcac51f12a2 201 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 90 1.4E-25 T 10-03-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CpPa04_RS02005 df5691f095b4765054967bcac51f12a2 201 SUPERFAMILY SSF55174 3 201 1.57E-65 T 10-03-2017 CpPa04_RS02005 df5691f095b4765054967bcac51f12a2 201 SMART SM01390 3 90 5.0E-42 T 10-03-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CpPa04_RS02005 df5691f095b4765054967bcac51f12a2 201 SMART SM00363 91 155 1.8E-16 T 10-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 CpPa04_RS02005 df5691f095b4765054967bcac51f12a2 201 Gene3D G3DSA:1.10.1050.10 1 93 2.9E-36 T 10-03-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CpPa04_RS02005 df5691f095b4765054967bcac51f12a2 201 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 201 2.2E-78 T 10-03-2017 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CpPa04_RS02005 df5691f095b4765054967bcac51f12a2 201 Pfam PF01479 S4 domain 92 137 2.8E-19 T 10-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 CpPa04_RS03125 43eace0a8d4fea10ebec5016b68cf9a5 302 SUPERFAMILY SSF51445 59 226 2.95E-11 T 10-03-2017 IPR017853 Glycoside hydrolase superfamily CpPa04_RS03125 43eace0a8d4fea10ebec5016b68cf9a5 302 Gene3D G3DSA:3.20.20.80 53 226 1.3E-12 T 10-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CpPa04_RS03125 43eace0a8d4fea10ebec5016b68cf9a5 302 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 8 31 3.4E-5 T 10-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CpPa04_RS03125 43eace0a8d4fea10ebec5016b68cf9a5 302 Pfam PF08924 Domain of unknown function (DUF1906) 52 182 1.0E-31 T 10-03-2017 IPR015020 Protein of unknown function DUF1906 CpPa04_RS03125 43eace0a8d4fea10ebec5016b68cf9a5 302 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 8 35 4.3E-4 T 10-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CpPa04_RS09880 27de75bbfbe4da399fb71effe471c335 257 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 77 252 4.7E-39 T 10-03-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CpPa04_RS09880 27de75bbfbe4da399fb71effe471c335 257 Gene3D G3DSA:3.40.50.150 82 242 5.8E-12 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS09880 27de75bbfbe4da399fb71effe471c335 257 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 40 257 26.813 T 10-03-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CpPa04_RS09880 27de75bbfbe4da399fb71effe471c335 257 SUPERFAMILY SSF53335 71 254 1.67E-30 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS09880 27de75bbfbe4da399fb71effe471c335 257 Pfam PF02390 Putative methyltransferase 83 251 3.3E-47 T 10-03-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CpPa04_RS09140 631935a6f632d409c92beb277ab43d01 280 Gene3D G3DSA:3.40.50.620 7 158 2.6E-12 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS09140 631935a6f632d409c92beb277ab43d01 280 Pfam PF09179 TilS substrate binding domain 213 275 1.0E-5 T 10-03-2017 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CpPa04_RS09140 631935a6f632d409c92beb277ab43d01 280 SUPERFAMILY SSF52402 12 205 1.33E-40 T 10-03-2017 CpPa04_RS09140 631935a6f632d409c92beb277ab43d01 280 Pfam PF01171 PP-loop family 15 174 1.1E-29 T 10-03-2017 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CpPa04_RS09140 631935a6f632d409c92beb277ab43d01 280 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 15 178 2.7E-35 T 10-03-2017 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CpPa04_RS09140 631935a6f632d409c92beb277ab43d01 280 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 269 16.972 T 10-03-2017 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CpPa04_RS06550 9b27bdaa02810c6b523e91928ac88723 457 SUPERFAMILY SSF52317 258 455 3.55E-32 T 10-03-2017 IPR029062 Class I glutamine amidotransferase-like CpPa04_RS06550 9b27bdaa02810c6b523e91928ac88723 457 Gene3D G3DSA:3.40.50.880 259 456 5.3E-30 T 10-03-2017 IPR029062 Class I glutamine amidotransferase-like CpPa04_RS06550 9b27bdaa02810c6b523e91928ac88723 457 SUPERFAMILY SSF52540 7 203 2.92E-41 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06550 9b27bdaa02810c6b523e91928ac88723 457 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 260 441 8.0E-24 T 10-03-2017 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 CpPa04_RS06550 9b27bdaa02810c6b523e91928ac88723 457 Hamap MF_00027 Cobyrinate a,c-diamide synthase [cbiA]. 5 446 39.936 T 10-03-2017 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 CpPa04_RS06550 9b27bdaa02810c6b523e91928ac88723 457 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 202 7.4E-23 T 10-03-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CpPa04_RS06550 9b27bdaa02810c6b523e91928ac88723 457 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 8 454 2.6E-113 T 10-03-2017 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 CpPa04_RS06550 9b27bdaa02810c6b523e91928ac88723 457 Gene3D G3DSA:3.40.50.300 54 203 4.8E-18 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06550 9b27bdaa02810c6b523e91928ac88723 457 Gene3D G3DSA:3.40.50.300 6 49 9.0E-6 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06975 ed0789e18176cf8ef4b6bfe0c00e9e8d 211 Gene3D G3DSA:3.30.70.240 138 205 6.8E-10 T 10-03-2017 IPR000640 Translation elongation factor EFG, V domain CpPa04_RS06975 ed0789e18176cf8ef4b6bfe0c00e9e8d 211 Gene3D G3DSA:3.30.230.30 9 133 1.0E-43 T 10-03-2017 IPR001498 Impact, N-terminal CpPa04_RS06975 ed0789e18176cf8ef4b6bfe0c00e9e8d 211 SUPERFAMILY SSF54980 138 200 2.37E-9 T 10-03-2017 IPR009022 Elongation factor G, III-V domain CpPa04_RS06975 ed0789e18176cf8ef4b6bfe0c00e9e8d 211 SUPERFAMILY SSF54211 8 132 3.3E-41 T 10-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CpPa04_RS06975 ed0789e18176cf8ef4b6bfe0c00e9e8d 211 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 10 194 2.6E-55 T 10-03-2017 IPR015796 Impact family, bacterial/archaeal CpPa04_RS06975 ed0789e18176cf8ef4b6bfe0c00e9e8d 211 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 80 109 - T 10-03-2017 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CpPa04_RS06975 ed0789e18176cf8ef4b6bfe0c00e9e8d 211 Pfam PF01205 Uncharacterized protein family UPF0029 18 125 4.1E-27 T 10-03-2017 IPR001498 Impact, N-terminal CpPa04_RS06975 ed0789e18176cf8ef4b6bfe0c00e9e8d 211 Pfam PF09186 Domain of unknown function (DUF1949) 142 195 1.4E-13 T 10-03-2017 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal CpPa04_RS06755 0a887f7941d635908d048df31c8637a9 112 PRINTS PR00340 P-II protein signature 23 41 1.2E-38 T 10-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CpPa04_RS06755 0a887f7941d635908d048df31c8637a9 112 PRINTS PR00340 P-II protein signature 83 103 1.2E-38 T 10-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CpPa04_RS06755 0a887f7941d635908d048df31c8637a9 112 PRINTS PR00340 P-II protein signature 52 75 1.2E-38 T 10-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CpPa04_RS06755 0a887f7941d635908d048df31c8637a9 112 PRINTS PR00340 P-II protein signature 2 17 1.2E-38 T 10-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CpPa04_RS06755 0a887f7941d635908d048df31c8637a9 112 SMART SM00938 4 105 4.5E-58 T 10-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CpPa04_RS06755 0a887f7941d635908d048df31c8637a9 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.5E-40 T 10-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CpPa04_RS06755 0a887f7941d635908d048df31c8637a9 112 Gene3D G3DSA:3.30.70.120 1 112 4.5E-47 T 10-03-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CpPa04_RS06755 0a887f7941d635908d048df31c8637a9 112 PIRSF PIRSF039144 1 112 7.6E-54 T 10-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CpPa04_RS06755 0a887f7941d635908d048df31c8637a9 112 SUPERFAMILY SSF54913 1 112 6.35E-43 T 10-03-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta CpPa04_RS06755 0a887f7941d635908d048df31c8637a9 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 10-03-2017 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 CpPa04_RS06755 0a887f7941d635908d048df31c8637a9 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 10-03-2017 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CpPa04_RS09130 b8f5ed794a07d460bf7ba00dca657cdf 667 SUPERFAMILY SSF52540 155 403 2.75E-72 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09130 b8f5ed794a07d460bf7ba00dca657cdf 667 ProSitePatterns PS00674 AAA-protein family signature. 302 320 - T 10-03-2017 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CpPa04_RS09130 b8f5ed794a07d460bf7ba00dca657cdf 667 Gene3D G3DSA:3.40.50.300 155 340 8.8E-63 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09130 b8f5ed794a07d460bf7ba00dca657cdf 667 SMART SM00382 195 334 1.3E-25 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS09130 b8f5ed794a07d460bf7ba00dca657cdf 667 SUPERFAMILY SSF140990 412 609 1.14E-63 T 10-03-2017 CpPa04_RS09130 b8f5ed794a07d460bf7ba00dca657cdf 667 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 203 222 8.9E-6 T 10-03-2017 CpPa04_RS09130 b8f5ed794a07d460bf7ba00dca657cdf 667 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 492 511 8.9E-6 T 10-03-2017 CpPa04_RS09130 b8f5ed794a07d460bf7ba00dca657cdf 667 Pfam PF01434 Peptidase family M41 393 598 1.7E-69 T 10-03-2017 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 CpPa04_RS09130 b8f5ed794a07d460bf7ba00dca657cdf 667 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 4 618 35.2 T 10-03-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CpPa04_RS09130 b8f5ed794a07d460bf7ba00dca657cdf 667 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 114 600 6.6E-216 T 10-03-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CpPa04_RS09130 b8f5ed794a07d460bf7ba00dca657cdf 667 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 199 331 1.6E-45 T 10-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 CpPa04_RS09130 b8f5ed794a07d460bf7ba00dca657cdf 667 Gene3D G3DSA:1.10.8.60 341 405 2.0E-22 T 10-03-2017 CpPa04_RS02370 a8ec3c12017b5c5e2e836b69c1c180f7 361 Pfam PF03631 Virulence factor BrkB 54 310 6.1E-43 T 10-03-2017 IPR017039 Virulence factor BrkB CpPa04_RS01845 69686529b74b8461b4fdd145204aeb79 327 Gene3D G3DSA:1.10.3720.10 91 315 2.5E-16 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS01845 69686529b74b8461b4fdd145204aeb79 327 SUPERFAMILY SSF161098 92 162 2.09E-13 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS01845 69686529b74b8461b4fdd145204aeb79 327 SUPERFAMILY SSF161098 190 308 2.09E-13 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS01845 69686529b74b8461b4fdd145204aeb79 327 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 325 1.4E-35 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS04305 8c9f66c91c1da4f1358044da90ae24e7 542 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 5.9E-43 T 10-03-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CpPa04_RS04305 8c9f66c91c1da4f1358044da90ae24e7 542 Gene3D G3DSA:1.20.150.20 383 511 3.8E-46 T 10-03-2017 CpPa04_RS04305 8c9f66c91c1da4f1358044da90ae24e7 542 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 10-03-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CpPa04_RS04305 8c9f66c91c1da4f1358044da90ae24e7 542 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 6 512 1.7E-240 T 10-03-2017 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 CpPa04_RS04305 8c9f66c91c1da4f1358044da90ae24e7 542 SUPERFAMILY SSF50615 15 97 1.33E-24 T 10-03-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CpPa04_RS04305 8c9f66c91c1da4f1358044da90ae24e7 542 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 4 512 48.4 T 10-03-2017 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 CpPa04_RS04305 8c9f66c91c1da4f1358044da90ae24e7 542 Gene3D G3DSA:2.40.30.20 5 96 2.8E-30 T 10-03-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 CpPa04_RS04305 8c9f66c91c1da4f1358044da90ae24e7 542 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 95 1.4E-13 T 10-03-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CpPa04_RS04305 8c9f66c91c1da4f1358044da90ae24e7 542 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 152 375 1.7E-68 T 10-03-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CpPa04_RS04305 8c9f66c91c1da4f1358044da90ae24e7 542 SUPERFAMILY SSF52540 99 381 2.63E-94 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04305 8c9f66c91c1da4f1358044da90ae24e7 542 SUPERFAMILY SSF47917 383 512 1.54E-42 T 10-03-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CpPa04_RS04305 8c9f66c91c1da4f1358044da90ae24e7 542 Gene3D G3DSA:3.40.50.300 98 382 4.6E-110 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS10365 a53c7a4829a45a4eb4ccc70398696578 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 159 9.7E-17 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS10365 a53c7a4829a45a4eb4ccc70398696578 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 114 130 9.7E-17 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS10365 a53c7a4829a45a4eb4ccc70398696578 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 9.7E-17 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS10365 a53c7a4829a45a4eb4ccc70398696578 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 68 79 9.7E-17 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS10365 a53c7a4829a45a4eb4ccc70398696578 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 176 9.7E-17 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS10365 a53c7a4829a45a4eb4ccc70398696578 222 Gene3D G3DSA:3.40.50.720 2 209 2.1E-43 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS10365 a53c7a4829a45a4eb4ccc70398696578 222 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 127 155 - T 10-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CpPa04_RS10365 a53c7a4829a45a4eb4ccc70398696578 222 Pfam PF00106 short chain dehydrogenase 4 183 2.2E-35 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS10365 a53c7a4829a45a4eb4ccc70398696578 222 SUPERFAMILY SSF51735 2 209 1.62E-44 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS07210 78152ce2c65a4c0470994f0a6d67dc9b 209 Pfam PF00877 NlpC/P60 family 110 192 5.0E-23 T 10-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain CpPa04_RS07210 78152ce2c65a4c0470994f0a6d67dc9b 209 Gene3D G3DSA:3.90.1720.10 91 206 6.0E-41 T 10-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain CpPa04_RS07210 78152ce2c65a4c0470994f0a6d67dc9b 209 SUPERFAMILY SSF54001 87 209 2.84E-38 T 10-03-2017 CpPa04_RS08135 397f5ba58f92d3df024d6900d8ff54f1 157 Pfam PF02502 Ribose/Galactose Isomerase 3 140 2.4E-48 T 10-03-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CpPa04_RS08135 397f5ba58f92d3df024d6900d8ff54f1 157 TIGRFAM TIGR02133 RPI_actino: ribose 5-phosphate isomerase 1 148 5.5E-70 T 10-03-2017 IPR011860 Ribose 5-phosphate isomerase GO:0004751 CpPa04_RS08135 397f5ba58f92d3df024d6900d8ff54f1 157 PIRSF PIRSF005384 1 149 8.3E-53 T 10-03-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CpPa04_RS08135 397f5ba58f92d3df024d6900d8ff54f1 157 SUPERFAMILY SSF89623 1 153 1.19E-54 T 10-03-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CpPa04_RS08135 397f5ba58f92d3df024d6900d8ff54f1 157 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 147 2.1E-58 T 10-03-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CpPa04_RS08135 397f5ba58f92d3df024d6900d8ff54f1 157 Gene3D G3DSA:3.40.1400.10 1 149 1.8E-57 T 10-03-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CpPa04_RS00725 5cb136c71b411f81ad378872cf46c39e 163 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 3 159 1.5E-57 T 10-03-2017 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 CpPa04_RS00725 5cb136c71b411f81ad378872cf46c39e 163 SUPERFAMILY SSF52540 1 161 7.82E-26 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00725 5cb136c71b411f81ad378872cf46c39e 163 Gene3D G3DSA:3.40.50.300 2 160 9.8E-65 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00725 5cb136c71b411f81ad378872cf46c39e 163 Pfam PF01202 Shikimate kinase 9 159 9.8E-14 T 10-03-2017 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CpPa04_RS00725 5cb136c71b411f81ad378872cf46c39e 163 PRINTS PR01100 Shikimate kinase family signature 3 18 8.1E-5 T 10-03-2017 CpPa04_RS00725 5cb136c71b411f81ad378872cf46c39e 163 PRINTS PR01100 Shikimate kinase family signature 94 111 8.1E-5 T 10-03-2017 CpPa04_RS06415 9121dd29230d303057de4f676e68fd55 1045 Pfam PF09397 Ftsk gamma domain 944 997 8.6E-22 T 10-03-2017 IPR018541 FtsK gamma domain CpPa04_RS06415 9121dd29230d303057de4f676e68fd55 1045 SMART SM00843 936 1000 1.8E-28 T 10-03-2017 IPR018541 FtsK gamma domain CpPa04_RS06415 9121dd29230d303057de4f676e68fd55 1045 Gene3D G3DSA:3.40.50.300 609 900 3.0E-80 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06415 9121dd29230d303057de4f676e68fd55 1045 Pfam PF01580 FtsK/SpoIIIE family 638 835 7.1E-59 T 10-03-2017 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 CpPa04_RS06415 9121dd29230d303057de4f676e68fd55 1045 SUPERFAMILY SSF46785 940 1002 1.35E-16 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS06415 9121dd29230d303057de4f676e68fd55 1045 SUPERFAMILY SSF52540 609 905 1.35E-43 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06415 9121dd29230d303057de4f676e68fd55 1045 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 171 298 3.7E-5 T 10-03-2017 IPR025199 DNA translocase FtsK, 4TM region CpPa04_RS00600 a7804a61cc757a5bccd2936336e0c1e0 319 Gene3D G3DSA:3.40.50.720 143 249 1.3E-27 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS00600 a7804a61cc757a5bccd2936336e0c1e0 319 Pfam PF00107 Zinc-binding dehydrogenase 146 260 9.2E-23 T 10-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CpPa04_RS00600 a7804a61cc757a5bccd2936336e0c1e0 319 SUPERFAMILY SSF50129 1 134 1.35E-34 T 10-03-2017 IPR011032 GroES-like CpPa04_RS00600 a7804a61cc757a5bccd2936336e0c1e0 319 Gene3D G3DSA:3.90.180.10 1 142 2.2E-44 T 10-03-2017 IPR011032 GroES-like CpPa04_RS00600 a7804a61cc757a5bccd2936336e0c1e0 319 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 82 5.4E-6 T 10-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CpPa04_RS00600 a7804a61cc757a5bccd2936336e0c1e0 319 SUPERFAMILY SSF51735 106 277 1.28E-42 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS00600 a7804a61cc757a5bccd2936336e0c1e0 319 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 313 7.1E-123 T 10-03-2017 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 CpPa04_RS00600 a7804a61cc757a5bccd2936336e0c1e0 319 SMART SM00829 7 313 6.7E-26 T 10-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CpPa04_RS04265 7c62712065d04b266188be43338b3ed5 272 Gene3D G3DSA:3.40.50.150 83 269 5.8E-46 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS04265 7c62712065d04b266188be43338b3ed5 272 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 24 266 4.8E-63 T 10-03-2017 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CpPa04_RS04265 7c62712065d04b266188be43338b3ed5 272 Pfam PF05175 Methyltransferase small domain 100 183 3.2E-10 T 10-03-2017 IPR007848 Methyltransferase small domain GO:0008168 CpPa04_RS04265 7c62712065d04b266188be43338b3ed5 272 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 48 268 7.3E-42 T 10-03-2017 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CpPa04_RS04265 7c62712065d04b266188be43338b3ed5 272 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 2 270 37.455 T 10-03-2017 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CpPa04_RS04265 7c62712065d04b266188be43338b3ed5 272 SUPERFAMILY SSF53335 6 267 1.69E-46 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS04265 7c62712065d04b266188be43338b3ed5 272 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 176 182 - T 10-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CpPa04_RS04265 7c62712065d04b266188be43338b3ed5 272 Gene3D G3DSA:1.10.8.10 6 81 4.7E-18 T 10-03-2017 CpPa04_RS05745 376fa1ad1f9684a6ff65b0a882a57acf 410 Gene3D G3DSA:3.40.50.880 187 402 9.3E-63 T 10-03-2017 IPR029062 Class I glutamine amidotransferase-like CpPa04_RS05745 376fa1ad1f9684a6ff65b0a882a57acf 410 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 35 401 6.3E-139 T 10-03-2017 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CpPa04_RS05745 376fa1ad1f9684a6ff65b0a882a57acf 410 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 33 404 43.585 T 10-03-2017 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CpPa04_RS05745 376fa1ad1f9684a6ff65b0a882a57acf 410 Gene3D G3DSA:3.50.30.20 34 174 1.4E-54 T 10-03-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CpPa04_RS05745 376fa1ad1f9684a6ff65b0a882a57acf 410 SUPERFAMILY SSF52317 187 401 5.96E-50 T 10-03-2017 IPR029062 Class I glutamine amidotransferase-like CpPa04_RS05745 376fa1ad1f9684a6ff65b0a882a57acf 410 PRINTS PR00097 Anthranilate synthase component II signature 284 295 5.9E-6 T 10-03-2017 CpPa04_RS05745 376fa1ad1f9684a6ff65b0a882a57acf 410 PRINTS PR00097 Anthranilate synthase component II signature 256 265 5.9E-6 T 10-03-2017 CpPa04_RS05745 376fa1ad1f9684a6ff65b0a882a57acf 410 PRINTS PR00097 Anthranilate synthase component II signature 375 388 5.9E-6 T 10-03-2017 CpPa04_RS05745 376fa1ad1f9684a6ff65b0a882a57acf 410 PRINTS PR00096 Glutamine amidotransferase superfamily signature 284 295 2.8E-11 T 10-03-2017 CpPa04_RS05745 376fa1ad1f9684a6ff65b0a882a57acf 410 PRINTS PR00096 Glutamine amidotransferase superfamily signature 256 265 2.8E-11 T 10-03-2017 CpPa04_RS05745 376fa1ad1f9684a6ff65b0a882a57acf 410 PRINTS PR00096 Glutamine amidotransferase superfamily signature 375 388 2.8E-11 T 10-03-2017 CpPa04_RS05745 376fa1ad1f9684a6ff65b0a882a57acf 410 Pfam PF00117 Glutamine amidotransferase class-I 218 398 1.1E-38 T 10-03-2017 IPR017926 Glutamine amidotransferase CpPa04_RS05745 376fa1ad1f9684a6ff65b0a882a57acf 410 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 35 164 5.1E-49 T 10-03-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CpPa04_RS05745 376fa1ad1f9684a6ff65b0a882a57acf 410 SUPERFAMILY SSF52021 34 172 5.62E-51 T 10-03-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CpPa04_RS05745 376fa1ad1f9684a6ff65b0a882a57acf 410 SMART SM01097 33 165 3.1E-76 T 10-03-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CpPa04_RS05745 376fa1ad1f9684a6ff65b0a882a57acf 410 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 326 337 2.2E-33 T 10-03-2017 CpPa04_RS05745 376fa1ad1f9684a6ff65b0a882a57acf 410 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 301 318 2.2E-33 T 10-03-2017 CpPa04_RS05745 376fa1ad1f9684a6ff65b0a882a57acf 410 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 253 267 2.2E-33 T 10-03-2017 CpPa04_RS05745 376fa1ad1f9684a6ff65b0a882a57acf 410 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 214 228 2.2E-33 T 10-03-2017 CpPa04_RS05745 376fa1ad1f9684a6ff65b0a882a57acf 410 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 284 300 2.2E-33 T 10-03-2017 CpPa04_RS02475 cca8f6f65f829a3e7216b81fddfec385 344 SUPERFAMILY SSF47413 18 77 1.13E-14 T 10-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CpPa04_RS02475 cca8f6f65f829a3e7216b81fddfec385 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 20 65 3.8E-11 T 10-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CpPa04_RS02475 cca8f6f65f829a3e7216b81fddfec385 344 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 78 334 5.5E-25 T 10-03-2017 IPR001761 Periplasmic binding protein/LacI sugar binding domain CpPa04_RS02475 cca8f6f65f829a3e7216b81fddfec385 344 SUPERFAMILY SSF53822 75 335 3.64E-58 T 10-03-2017 IPR028082 Periplasmic binding protein-like I CpPa04_RS02475 cca8f6f65f829a3e7216b81fddfec385 344 Gene3D G3DSA:1.10.260.40 19 70 6.4E-20 T 10-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CpPa04_RS02475 cca8f6f65f829a3e7216b81fddfec385 344 SMART SM00354 18 88 7.4E-23 T 10-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CpPa04_RS02475 cca8f6f65f829a3e7216b81fddfec385 344 Gene3D G3DSA:3.40.50.2300 71 192 2.4E-42 T 10-03-2017 CpPa04_RS02475 cca8f6f65f829a3e7216b81fddfec385 344 Gene3D G3DSA:3.40.50.2300 193 323 1.8E-31 T 10-03-2017 CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 Gene3D G3DSA:3.40.50.20 545 678 1.3E-53 T 10-03-2017 IPR016185 Pre-ATP-grasp domain CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 SUPERFAMILY SSF56059 690 965 6.89E-96 T 10-03-2017 CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 855 862 - T 10-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 SMART SM01096 432 555 7.2E-56 T 10-03-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 Gene3D G3DSA:3.40.50.1380 970 1114 1.6E-40 T 10-03-2017 IPR011607 Methylglyoxal synthase-like domain CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 SUPERFAMILY SSF52335 973 1114 1.96E-33 T 10-03-2017 IPR011607 Methylglyoxal synthase-like domain CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 Gene3D G3DSA:3.30.1490.20 703 761 4.5E-26 T 10-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 SUPERFAMILY SSF56059 133 405 6.19E-97 T 10-03-2017 CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 Gene3D G3DSA:3.30.1490.20 148 207 1.7E-18 T 10-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 SUPERFAMILY SSF48108 401 559 7.59E-40 T 10-03-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 Gene3D G3DSA:3.30.470.20 762 966 9.7E-73 T 10-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 Gene3D G3DSA:3.30.470.20 208 404 7.8E-71 T 10-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 SMART SM00851 987 1085 7.8E-24 T 10-03-2017 IPR011607 Methylglyoxal synthase-like domain CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 209 228 3.7E-58 T 10-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 244 261 3.7E-58 T 10-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 3.7E-58 T 10-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 302 331 3.7E-58 T 10-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 173 185 3.7E-58 T 10-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 384 402 3.7E-58 T 10-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 3.7E-58 T 10-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 726 740 - T 10-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 Pfam PF02142 MGS-like domain 989 1085 6.1E-19 T 10-03-2017 IPR011607 Methylglyoxal synthase-like domain CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 SUPERFAMILY SSF52440 570 691 2.88E-43 T 10-03-2017 IPR016185 Pre-ATP-grasp domain CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 Gene3D G3DSA:1.10.1030.10 405 544 8.1E-41 T 10-03-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1105 12.85 T 10-03-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 SUPERFAMILY SSF52440 1 132 4.75E-43 T 10-03-2017 IPR016185 Pre-ATP-grasp domain CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 435 555 2.4E-35 T 10-03-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 690 892 3.4E-38 T 10-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 133 339 8.3E-65 T 10-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 Gene3D G3DSA:3.40.50.20 3 111 1.0E-39 T 10-03-2017 IPR016185 Pre-ATP-grasp domain CpPa04_RS05740 f8490906c3d0a3568d36b91b25106a6c 1120 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1095 0.0 T 10-03-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CpPa04_RS09530 a9c72ef625a339d00c61d158f822b2b8 296 Pfam PF04203 Sortase family 121 244 5.0E-25 T 10-03-2017 IPR005754 Sortase family CpPa04_RS09530 a9c72ef625a339d00c61d158f822b2b8 296 Gene3D G3DSA:2.40.260.10 111 249 4.2E-49 T 10-03-2017 IPR023365 Sortase domain CpPa04_RS09530 a9c72ef625a339d00c61d158f822b2b8 296 TIGRFAM TIGR01076 sortase_fam: sortase 118 252 2.2E-44 T 10-03-2017 IPR005754 Sortase family CpPa04_RS09530 a9c72ef625a339d00c61d158f822b2b8 296 SUPERFAMILY SSF63817 105 248 6.93E-44 T 10-03-2017 IPR023365 Sortase domain CpPa04_RS05535 d0cea9cf19fdd09afec105ae9ec54e7c 149 SUPERFAMILY SSF82649 1 144 6.02E-43 T 10-03-2017 CpPa04_RS05535 d0cea9cf19fdd09afec105ae9ec54e7c 149 Gene3D G3DSA:3.90.1010.10 5 148 1.1E-43 T 10-03-2017 CpPa04_RS05535 d0cea9cf19fdd09afec105ae9ec54e7c 149 Pfam PF01592 NifU-like N terminal domain 6 129 2.4E-29 T 10-03-2017 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 CpPa04_RS05535 d0cea9cf19fdd09afec105ae9ec54e7c 149 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 3 140 3.7E-48 T 10-03-2017 CpPa04_RS01170 8299f9711120f4e1e455e98e5331ef22 400 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 29 214 5.8E-56 T 10-03-2017 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CpPa04_RS01170 8299f9711120f4e1e455e98e5331ef22 400 SUPERFAMILY SSF52540 20 219 4.47E-40 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01170 8299f9711120f4e1e455e98e5331ef22 400 Pfam PF13177 DNA polymerase III, delta subunit 35 177 4.7E-35 T 10-03-2017 CpPa04_RS01170 8299f9711120f4e1e455e98e5331ef22 400 Gene3D G3DSA:3.40.50.300 14 178 3.2E-46 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01320 113ad1c10251275a491de0606ba63d22 248 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 230 42.491 T 10-03-2017 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 CpPa04_RS01320 113ad1c10251275a491de0606ba63d22 248 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 10-03-2017 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 CpPa04_RS01320 113ad1c10251275a491de0606ba63d22 248 SUPERFAMILY SSF53254 1 222 4.35E-71 T 10-03-2017 IPR029033 Histidine phosphatase superfamily CpPa04_RS01320 113ad1c10251275a491de0606ba63d22 248 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 246 4.8E-111 T 10-03-2017 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 CpPa04_RS01320 113ad1c10251275a491de0606ba63d22 248 Gene3D G3DSA:3.40.50.1240 5 246 6.7E-89 T 10-03-2017 IPR029033 Histidine phosphatase superfamily CpPa04_RS01320 113ad1c10251275a491de0606ba63d22 248 SMART SM00855 5 189 1.1E-23 T 10-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 CpPa04_RS01320 113ad1c10251275a491de0606ba63d22 248 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 132 5.5E-29 T 10-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 CpPa04_RS01320 113ad1c10251275a491de0606ba63d22 248 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 144 221 2.2E-6 T 10-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 CpPa04_RS03450 38ac5865cbc4461c31aa91a29e00c624 610 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 528 5.3E-141 T 10-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CpPa04_RS03450 38ac5865cbc4461c31aa91a29e00c624 610 Hamap MF_00098 Methionine--tRNA ligase [metG]. 3 605 38.115 T 10-03-2017 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CpPa04_RS03450 38ac5865cbc4461c31aa91a29e00c624 610 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 1.0E-24 T 10-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CpPa04_RS03450 38ac5865cbc4461c31aa91a29e00c624 610 PRINTS PR01041 Methionyl-tRNA synthetase signature 88 99 1.0E-24 T 10-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CpPa04_RS03450 38ac5865cbc4461c31aa91a29e00c624 610 PRINTS PR01041 Methionyl-tRNA synthetase signature 40 54 1.0E-24 T 10-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CpPa04_RS03450 38ac5865cbc4461c31aa91a29e00c624 610 PRINTS PR01041 Methionyl-tRNA synthetase signature 253 264 1.0E-24 T 10-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CpPa04_RS03450 38ac5865cbc4461c31aa91a29e00c624 610 PRINTS PR01041 Methionyl-tRNA synthetase signature 293 308 1.0E-24 T 10-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CpPa04_RS03450 38ac5865cbc4461c31aa91a29e00c624 610 PRINTS PR01041 Methionyl-tRNA synthetase signature 399 410 1.0E-24 T 10-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CpPa04_RS03450 38ac5865cbc4461c31aa91a29e00c624 610 SUPERFAMILY SSF57770 140 174 6.93E-12 T 10-03-2017 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CpPa04_RS03450 38ac5865cbc4461c31aa91a29e00c624 610 Gene3D G3DSA:3.40.50.620 181 394 1.1E-86 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS03450 38ac5865cbc4461c31aa91a29e00c624 610 Gene3D G3DSA:3.40.50.620 4 142 1.1E-86 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS03450 38ac5865cbc4461c31aa91a29e00c624 610 Gene3D G3DSA:1.10.730.10 395 530 1.7E-51 T 10-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS03450 38ac5865cbc4461c31aa91a29e00c624 610 Gene3D G3DSA:1.10.730.10 568 594 1.7E-51 T 10-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS03450 38ac5865cbc4461c31aa91a29e00c624 610 Pfam PF09334 tRNA synthetases class I (M) 5 411 2.5E-142 T 10-03-2017 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS03450 38ac5865cbc4461c31aa91a29e00c624 610 SUPERFAMILY SSF47323 404 532 5.79E-34 T 10-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS03450 38ac5865cbc4461c31aa91a29e00c624 610 SUPERFAMILY SSF47323 573 600 5.79E-34 T 10-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS03450 38ac5865cbc4461c31aa91a29e00c624 610 Gene3D G3DSA:2.20.28.20 143 174 1.7E-18 T 10-03-2017 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CpPa04_RS03450 38ac5865cbc4461c31aa91a29e00c624 610 SUPERFAMILY SSF52374 3 139 5.63E-94 T 10-03-2017 CpPa04_RS03450 38ac5865cbc4461c31aa91a29e00c624 610 SUPERFAMILY SSF52374 174 399 5.63E-94 T 10-03-2017 CpPa04_RS00790 5f29b89df324dd4539391f38067baa48 234 SMART SM00345 9 68 5.7E-18 T 10-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CpPa04_RS00790 5f29b89df324dd4539391f38067baa48 234 Gene3D G3DSA:1.10.10.10 4 74 4.6E-22 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS00790 5f29b89df324dd4539391f38067baa48 234 Pfam PF07729 FCD domain 97 219 3.8E-28 T 10-03-2017 IPR011711 GntR, C-terminal CpPa04_RS00790 5f29b89df324dd4539391f38067baa48 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 68 1.2E-17 T 10-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CpPa04_RS00790 5f29b89df324dd4539391f38067baa48 234 SUPERFAMILY SSF48008 97 225 1.15E-30 T 10-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal CpPa04_RS00790 5f29b89df324dd4539391f38067baa48 234 SUPERFAMILY SSF46785 5 72 1.65E-19 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS00790 5f29b89df324dd4539391f38067baa48 234 Gene3D G3DSA:1.20.120.530 97 226 6.9E-34 T 10-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal CpPa04_RS00790 5f29b89df324dd4539391f38067baa48 234 SMART SM00895 96 220 1.0E-26 T 10-03-2017 IPR011711 GntR, C-terminal CpPa04_RS00790 5f29b89df324dd4539391f38067baa48 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 3.1E-6 T 10-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CpPa04_RS00790 5f29b89df324dd4539391f38067baa48 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 3.1E-6 T 10-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CpPa04_RS09755 87a9f7ef4146e835cd8bc0f3774f70cf 158 Pfam PF02814 UreE urease accessory protein, N-terminal domain 14 73 1.3E-14 T 10-03-2017 IPR004029 UreE urease accessory, N-terminal CpPa04_RS09755 87a9f7ef4146e835cd8bc0f3774f70cf 158 Hamap MF_00822 Urease accessory protein UreE [ureE]. 1 158 19.758 T 10-03-2017 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 CpPa04_RS09755 87a9f7ef4146e835cd8bc0f3774f70cf 158 SUPERFAMILY SSF69737 80 152 1.28E-13 T 10-03-2017 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 CpPa04_RS09755 87a9f7ef4146e835cd8bc0f3774f70cf 158 Gene3D G3DSA:3.30.70.790 80 158 3.5E-21 T 10-03-2017 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 CpPa04_RS09755 87a9f7ef4146e835cd8bc0f3774f70cf 158 SMART SM00988 6 73 2.8E-6 T 10-03-2017 IPR004029 UreE urease accessory, N-terminal CpPa04_RS09755 87a9f7ef4146e835cd8bc0f3774f70cf 158 Gene3D G3DSA:2.60.260.20 2 77 3.6E-17 T 10-03-2017 CpPa04_RS09755 87a9f7ef4146e835cd8bc0f3774f70cf 158 Pfam PF05194 UreE urease accessory protein, C-terminal domain 81 142 7.9E-6 T 10-03-2017 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 CpPa04_RS09755 87a9f7ef4146e835cd8bc0f3774f70cf 158 SUPERFAMILY SSF69287 2 77 4.05E-12 T 10-03-2017 IPR004029 UreE urease accessory, N-terminal CpPa04_RS09755 87a9f7ef4146e835cd8bc0f3774f70cf 158 PIRSF PIRSF036402 1 158 5.9E-39 T 10-03-2017 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 CpPa04_RS05570 1941c2c166bb32ec562431c8f60a6d64 318 Pfam PF00005 ABC transporter 36 173 6.6E-25 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS05570 1941c2c166bb32ec562431c8f60a6d64 318 SUPERFAMILY SSF52540 17 243 4.44E-60 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05570 1941c2c166bb32ec562431c8f60a6d64 318 Gene3D G3DSA:3.40.50.300 13 244 4.9E-66 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05570 1941c2c166bb32ec562431c8f60a6d64 318 SMART SM00382 43 221 2.1E-16 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS05570 1941c2c166bb32ec562431c8f60a6d64 318 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS01610 8074b38f5d07a999341c5e273c744c61 171 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 10-03-2017 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01610 8074b38f5d07a999341c5e273c744c61 171 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 158 23.738 T 10-03-2017 IPR022973 Ribosomal protein L10 CpPa04_RS01610 8074b38f5d07a999341c5e273c744c61 171 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 60 150 9.0E-5 T 10-03-2017 CpPa04_RS01610 8074b38f5d07a999341c5e273c744c61 171 Pfam PF00466 Ribosomal protein L10 5 97 1.0E-24 T 10-03-2017 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 CpPa04_RS01610 8074b38f5d07a999341c5e273c744c61 171 SUPERFAMILY SSF160369 2 169 4.18E-47 T 10-03-2017 CpPa04_RS07565 afe046554898bf105ed2c89191a9926f 372 Pfam PF00155 Aminotransferase class I and II 47 372 8.3E-33 T 10-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CpPa04_RS07565 afe046554898bf105ed2c89191a9926f 372 Gene3D G3DSA:3.90.1150.10 275 372 1.3E-23 T 10-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CpPa04_RS07565 afe046554898bf105ed2c89191a9926f 372 SUPERFAMILY SSF53383 38 372 1.39E-58 T 10-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase CpPa04_RS07565 afe046554898bf105ed2c89191a9926f 372 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 228 241 - T 10-03-2017 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CpPa04_RS07565 afe046554898bf105ed2c89191a9926f 372 Gene3D G3DSA:3.40.640.10 51 274 1.9E-47 T 10-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CpPa04_RS06660 3911d66fc6c24fbd63859e02720d4812 276 Pfam PF00318 Ribosomal protein S2 9 225 7.1E-95 T 10-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS06660 3911d66fc6c24fbd63859e02720d4812 276 PRINTS PR00395 Ribosomal protein S2 signature 176 187 5.8E-39 T 10-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS06660 3911d66fc6c24fbd63859e02720d4812 276 PRINTS PR00395 Ribosomal protein S2 signature 87 104 5.8E-39 T 10-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS06660 3911d66fc6c24fbd63859e02720d4812 276 PRINTS PR00395 Ribosomal protein S2 signature 6 24 5.8E-39 T 10-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS06660 3911d66fc6c24fbd63859e02720d4812 276 PRINTS PR00395 Ribosomal protein S2 signature 159 176 5.8E-39 T 10-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS06660 3911d66fc6c24fbd63859e02720d4812 276 PRINTS PR00395 Ribosomal protein S2 signature 37 46 5.8E-39 T 10-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS06660 3911d66fc6c24fbd63859e02720d4812 276 PRINTS PR00395 Ribosomal protein S2 signature 197 211 5.8E-39 T 10-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS06660 3911d66fc6c24fbd63859e02720d4812 276 Gene3D G3DSA:1.10.287.610 100 152 3.7E-22 T 10-03-2017 CpPa04_RS06660 3911d66fc6c24fbd63859e02720d4812 276 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 226 41.511 T 10-03-2017 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 CpPa04_RS06660 3911d66fc6c24fbd63859e02720d4812 276 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 227 3.5E-105 T 10-03-2017 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 CpPa04_RS06660 3911d66fc6c24fbd63859e02720d4812 276 Gene3D G3DSA:3.40.50.10490 159 245 3.2E-67 T 10-03-2017 CpPa04_RS06660 3911d66fc6c24fbd63859e02720d4812 276 Gene3D G3DSA:3.40.50.10490 23 99 3.2E-67 T 10-03-2017 CpPa04_RS06660 3911d66fc6c24fbd63859e02720d4812 276 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 10-03-2017 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CpPa04_RS06660 3911d66fc6c24fbd63859e02720d4812 276 SUPERFAMILY SSF52313 6 231 1.7E-90 T 10-03-2017 IPR023591 Ribosomal protein S2, flavodoxin-like domain CpPa04_RS08350 b2b4e78cc123de7487db3c144880fda2 343 Pfam PF04235 Protein of unknown function (DUF418) 179 314 1.4E-22 T 10-03-2017 IPR007349 Domain of unknown function DUF418 CpPa04_RS05765 ec27c8f0246a208513872fd17e1f7f28 459 SUPERFAMILY SSF51735 153 438 7.94E-30 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS05765 ec27c8f0246a208513872fd17e1f7f28 459 Gene3D G3DSA:3.40.50.720 151 384 1.0E-17 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS05765 ec27c8f0246a208513872fd17e1f7f28 459 Pfam PF08338 Domain of unknown function (DUF1731) 396 443 4.7E-11 T 10-03-2017 IPR013549 Domain of unknown function DUF1731 CpPa04_RS05765 ec27c8f0246a208513872fd17e1f7f28 459 SUPERFAMILY SSF55961 1 124 1.65E-11 T 10-03-2017 CpPa04_RS05765 ec27c8f0246a208513872fd17e1f7f28 459 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 155 440 6.7E-83 T 10-03-2017 IPR010099 Epimerase family protein SDR39U1 CpPa04_RS05765 ec27c8f0246a208513872fd17e1f7f28 459 Pfam PF01370 NAD dependent epimerase/dehydratase family 156 310 3.1E-7 T 10-03-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CpPa04_RS02905 7a425afd1e2b5ad92d650db945fc65b0 268 Gene3D G3DSA:3.40.190.80 156 261 1.3E-19 T 10-03-2017 CpPa04_RS02905 7a425afd1e2b5ad92d650db945fc65b0 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 211 235 1.7E-16 T 10-03-2017 IPR000760 Inositol monophosphatase GO:0046854 CpPa04_RS02905 7a425afd1e2b5ad92d650db945fc65b0 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 1.7E-16 T 10-03-2017 IPR000760 Inositol monophosphatase GO:0046854 CpPa04_RS02905 7a425afd1e2b5ad92d650db945fc65b0 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 1.7E-16 T 10-03-2017 IPR000760 Inositol monophosphatase GO:0046854 CpPa04_RS02905 7a425afd1e2b5ad92d650db945fc65b0 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 82 98 1.7E-16 T 10-03-2017 IPR000760 Inositol monophosphatase GO:0046854 CpPa04_RS02905 7a425afd1e2b5ad92d650db945fc65b0 268 SUPERFAMILY SSF56655 4 260 1.31E-74 T 10-03-2017 CpPa04_RS02905 7a425afd1e2b5ad92d650db945fc65b0 268 Gene3D G3DSA:3.30.540.10 3 155 2.8E-46 T 10-03-2017 CpPa04_RS02905 7a425afd1e2b5ad92d650db945fc65b0 268 Pfam PF00459 Inositol monophosphatase family 7 244 4.3E-47 T 10-03-2017 IPR000760 Inositol monophosphatase GO:0046854 CpPa04_RS02905 7a425afd1e2b5ad92d650db945fc65b0 268 TIGRFAM TIGR02067 his_9_HisN: histidinol-phosphatase 8 259 2.9E-87 T 10-03-2017 IPR011809 Histidinol-phosphate phosphatase, putative, inositol monophosphatase GO:0004401 KEGG: 00340+3.1.3.15 CpPa04_RS02260 6e0fc0a310ba7371832751fc72c3df2c 252 Pfam PF00005 ABC transporter 37 180 2.9E-25 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS02260 6e0fc0a310ba7371832751fc72c3df2c 252 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS02260 6e0fc0a310ba7371832751fc72c3df2c 252 SMART SM00382 46 235 3.3E-14 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS02260 6e0fc0a310ba7371832751fc72c3df2c 252 SUPERFAMILY SSF52540 16 239 2.02E-50 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02260 6e0fc0a310ba7371832751fc72c3df2c 252 Gene3D G3DSA:3.40.50.300 15 243 7.7E-55 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06790 680b36075cc80088097c1f900cd0cd5d 249 ProSitePatterns PS00517 Ribonuclease III family signature. 59 67 - T 10-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CpPa04_RS06790 680b36075cc80088097c1f900cd0cd5d 249 Gene3D G3DSA:1.10.1520.10 29 166 5.1E-41 T 10-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CpPa04_RS06790 680b36075cc80088097c1f900cd0cd5d 249 SUPERFAMILY SSF54768 130 243 2.2E-25 T 10-03-2017 CpPa04_RS06790 680b36075cc80088097c1f900cd0cd5d 249 Pfam PF14622 Ribonuclease-III-like 37 159 3.5E-38 T 10-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CpPa04_RS06790 680b36075cc80088097c1f900cd0cd5d 249 Pfam PF00035 Double-stranded RNA binding motif 177 239 1.5E-14 T 10-03-2017 IPR014720 Double-stranded RNA-binding domain CpPa04_RS06790 680b36075cc80088097c1f900cd0cd5d 249 SUPERFAMILY SSF69065 21 179 6.45E-44 T 10-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CpPa04_RS06790 680b36075cc80088097c1f900cd0cd5d 249 Gene3D G3DSA:3.30.160.20 174 243 1.5E-21 T 10-03-2017 IPR014720 Double-stranded RNA-binding domain CpPa04_RS06790 680b36075cc80088097c1f900cd0cd5d 249 Hamap MF_00104 Ribonuclease 3 [rnc]. 26 239 28.769 T 10-03-2017 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CpPa04_RS06790 680b36075cc80088097c1f900cd0cd5d 249 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 36 240 7.5E-69 T 10-03-2017 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CpPa04_RS06790 680b36075cc80088097c1f900cd0cd5d 249 SMART SM00535 37 170 4.9E-48 T 10-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CpPa04_RS06790 680b36075cc80088097c1f900cd0cd5d 249 SMART SM00358 177 243 3.1E-19 T 10-03-2017 IPR014720 Double-stranded RNA-binding domain CpPa04_RS07515 d1e1e262cfda50527ccae3b5e3d10a76 446 Gene3D G3DSA:3.30.590.10 110 434 4.4E-111 T 10-03-2017 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CpPa04_RS07515 d1e1e262cfda50527ccae3b5e3d10a76 446 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 100 2.1E-24 T 10-03-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CpPa04_RS07515 d1e1e262cfda50527ccae3b5e3d10a76 446 Pfam PF00120 Glutamine synthetase, catalytic domain 107 441 8.8E-122 T 10-03-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CpPa04_RS07515 d1e1e262cfda50527ccae3b5e3d10a76 446 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 234 249 - T 10-03-2017 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CpPa04_RS07515 d1e1e262cfda50527ccae3b5e3d10a76 446 SUPERFAMILY SSF55931 108 445 5.0E-112 T 10-03-2017 CpPa04_RS07515 d1e1e262cfda50527ccae3b5e3d10a76 446 SMART SM01230 106 357 5.3E-119 T 10-03-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CpPa04_RS07515 d1e1e262cfda50527ccae3b5e3d10a76 446 Gene3D G3DSA:3.10.20.70 6 109 1.2E-36 T 10-03-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CpPa04_RS07515 d1e1e262cfda50527ccae3b5e3d10a76 446 SUPERFAMILY SSF54368 8 106 2.22E-29 T 10-03-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CpPa04_RS00395 c30d4b2968bcc9a86f0ee1aee9f44d72 360 Pfam PF05145 Putative ammonia monooxygenase 37 345 6.7E-62 T 10-03-2017 IPR007820 AbrB family GO:0010468|GO:0016021 CpPa04_RS00395 c30d4b2968bcc9a86f0ee1aee9f44d72 360 PIRSF PIRSF038991 3 358 1.3E-78 T 10-03-2017 IPR007820 AbrB family GO:0010468|GO:0016021 CpPa04_RS00395 c30d4b2968bcc9a86f0ee1aee9f44d72 360 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 14 171 5.4E-31 T 10-03-2017 IPR017516 AbrB duplication CpPa04_RS00395 c30d4b2968bcc9a86f0ee1aee9f44d72 360 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 193 348 9.7E-31 T 10-03-2017 IPR017516 AbrB duplication CpPa04_RS01350 e9aa73f5d121f3538930283280748cb4 267 Gene3D G3DSA:1.10.3730.10 161 266 5.0E-40 T 10-03-2017 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CpPa04_RS01350 e9aa73f5d121f3538930283280748cb4 267 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 10-03-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CpPa04_RS01350 e9aa73f5d121f3538930283280748cb4 267 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 4 266 3.3E-83 T 10-03-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CpPa04_RS01350 e9aa73f5d121f3538930283280748cb4 267 PIRSF PIRSF000193 1 267 1.5E-81 T 10-03-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CpPa04_RS01350 e9aa73f5d121f3538930283280748cb4 267 SUPERFAMILY SSF51735 4 159 2.73E-36 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS01350 e9aa73f5d121f3538930283280748cb4 267 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 266 1.0E-38 T 10-03-2017 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CpPa04_RS01350 e9aa73f5d121f3538930283280748cb4 267 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 99 1.4E-22 T 10-03-2017 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CpPa04_RS01350 e9aa73f5d121f3538930283280748cb4 267 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 2 266 26.927 T 10-03-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CpPa04_RS01350 e9aa73f5d121f3538930283280748cb4 267 Gene3D G3DSA:3.40.50.720 2 158 3.0E-44 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS01350 e9aa73f5d121f3538930283280748cb4 267 SUPERFAMILY SSF48179 161 266 1.05E-34 T 10-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CpPa04_RS05590 e23c12bb0776e456b7f751397efa0345 697 Gene3D G3DSA:3.40.50.970 355 566 1.8E-74 T 10-03-2017 IPR029061 Thiamin diphosphate-binding fold CpPa04_RS05590 e23c12bb0776e456b7f751397efa0345 697 SMART SM00861 375 555 6.7E-64 T 10-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain CpPa04_RS05590 e23c12bb0776e456b7f751397efa0345 697 Gene3D G3DSA:3.40.50.920 569 695 1.7E-47 T 10-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CpPa04_RS05590 e23c12bb0776e456b7f751397efa0345 697 SUPERFAMILY SSF52922 561 696 6.54E-42 T 10-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CpPa04_RS05590 e23c12bb0776e456b7f751397efa0345 697 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 23 358 3.0E-138 T 10-03-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CpPa04_RS05590 e23c12bb0776e456b7f751397efa0345 697 SUPERFAMILY SSF52518 18 344 2.7E-99 T 10-03-2017 IPR029061 Thiamin diphosphate-binding fold CpPa04_RS05590 e23c12bb0776e456b7f751397efa0345 697 ProSitePatterns PS00801 Transketolase signature 1. 31 51 - T 10-03-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CpPa04_RS05590 e23c12bb0776e456b7f751397efa0345 697 Pfam PF02779 Transketolase, pyrimidine binding domain 374 554 1.8E-44 T 10-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain CpPa04_RS05590 e23c12bb0776e456b7f751397efa0345 697 Gene3D G3DSA:3.40.50.970 20 344 3.0E-106 T 10-03-2017 IPR029061 Thiamin diphosphate-binding fold CpPa04_RS05590 e23c12bb0776e456b7f751397efa0345 697 ProSitePatterns PS00802 Transketolase signature 2. 497 513 - T 10-03-2017 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CpPa04_RS05590 e23c12bb0776e456b7f751397efa0345 697 TIGRFAM TIGR00232 tktlase_bact: transketolase 26 694 1.6E-241 T 10-03-2017 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 CpPa04_RS05590 e23c12bb0776e456b7f751397efa0345 697 Pfam PF02780 Transketolase, C-terminal domain 580 687 1.9E-15 T 10-03-2017 IPR033248 Transketolase, C-terminal domain CpPa04_RS05590 e23c12bb0776e456b7f751397efa0345 697 SUPERFAMILY SSF52518 363 557 3.37E-65 T 10-03-2017 IPR029061 Thiamin diphosphate-binding fold CpPa04_RS04695 cce5250b7589f4871160bc655f714d68 272 Pfam PF02567 Phenazine biosynthesis-like protein 6 250 1.7E-54 T 10-03-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CpPa04_RS04695 cce5250b7589f4871160bc655f714d68 272 SUPERFAMILY SSF54506 2 272 7.12E-65 T 10-03-2017 CpPa04_RS04695 cce5250b7589f4871160bc655f714d68 272 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 254 1.5E-58 T 10-03-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CpPa04_RS04695 cce5250b7589f4871160bc655f714d68 272 PIRSF PIRSF016184 1 272 3.2E-66 T 10-03-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CpPa04_RS04695 cce5250b7589f4871160bc655f714d68 272 Gene3D G3DSA:3.10.310.10 2 120 2.1E-40 T 10-03-2017 CpPa04_RS04695 cce5250b7589f4871160bc655f714d68 272 Gene3D G3DSA:3.10.310.10 123 260 2.7E-31 T 10-03-2017 CpPa04_RS06810 dcb4abbad03f924397aa10841e7d18c4 369 Gene3D G3DSA:3.40.50.1770 1 173 4.2E-55 T 10-03-2017 CpPa04_RS06810 dcb4abbad03f924397aa10841e7d18c4 369 Gene3D G3DSA:3.50.50.60 174 195 2.5E-6 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS06810 dcb4abbad03f924397aa10841e7d18c4 369 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 139 350 2.0E-78 T 10-03-2017 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CpPa04_RS06810 dcb4abbad03f924397aa10841e7d18c4 369 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 171 196 - T 10-03-2017 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 CpPa04_RS06810 dcb4abbad03f924397aa10841e7d18c4 369 SUPERFAMILY SSF52283 303 358 2.98E-63 T 10-03-2017 CpPa04_RS06810 dcb4abbad03f924397aa10841e7d18c4 369 SUPERFAMILY SSF52283 1 135 2.98E-63 T 10-03-2017 CpPa04_RS06810 dcb4abbad03f924397aa10841e7d18c4 369 Gene3D G3DSA:3.40.50.1770 196 357 6.6E-25 T 10-03-2017 CpPa04_RS06810 dcb4abbad03f924397aa10841e7d18c4 369 SMART SM01002 147 295 4.1E-80 T 10-03-2017 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CpPa04_RS06810 dcb4abbad03f924397aa10841e7d18c4 369 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 366 1.2E-163 T 10-03-2017 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 CpPa04_RS06810 dcb4abbad03f924397aa10841e7d18c4 369 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 135 1.5E-44 T 10-03-2017 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CpPa04_RS06810 dcb4abbad03f924397aa10841e7d18c4 369 SUPERFAMILY SSF51735 135 301 5.32E-46 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS06810 dcb4abbad03f924397aa10841e7d18c4 369 PIRSF PIRSF000183 1 369 4.6E-162 T 10-03-2017 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 CpPa04_RS06810 dcb4abbad03f924397aa10841e7d18c4 369 SMART SM01003 4 135 2.5E-71 T 10-03-2017 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CpPa04_RS10650 9584510e8624ce8c1b9f2ba45c25348e 1157 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 135 642 8.5E-71 T 10-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ CpPa04_RS10650 9584510e8624ce8c1b9f2ba45c25348e 1157 PRINTS PR01806 Virulence factor MviN signature 261 285 4.4E-13 T 10-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ CpPa04_RS10650 9584510e8624ce8c1b9f2ba45c25348e 1157 PRINTS PR01806 Virulence factor MviN signature 398 424 4.4E-13 T 10-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ CpPa04_RS10650 9584510e8624ce8c1b9f2ba45c25348e 1157 PRINTS PR01806 Virulence factor MviN signature 164 183 4.4E-13 T 10-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ CpPa04_RS10650 9584510e8624ce8c1b9f2ba45c25348e 1157 PRINTS PR01806 Virulence factor MviN signature 285 306 4.4E-13 T 10-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ CpPa04_RS10650 9584510e8624ce8c1b9f2ba45c25348e 1157 PRINTS PR01806 Virulence factor MviN signature 496 515 4.4E-13 T 10-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ CpPa04_RS10650 9584510e8624ce8c1b9f2ba45c25348e 1157 Pfam PF03023 MviN-like protein 164 618 1.6E-91 T 10-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ CpPa04_RS10650 9584510e8624ce8c1b9f2ba45c25348e 1157 Gene3D G3DSA:3.30.200.20 721 805 6.7E-5 T 10-03-2017 CpPa04_RS04030 f6ab587e9b0c53e8ca99341268a2a063 147 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 22 41 3.2E-7 T 10-03-2017 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CpPa04_RS04030 f6ab587e9b0c53e8ca99341268a2a063 147 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 2 22 3.2E-7 T 10-03-2017 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CpPa04_RS04030 f6ab587e9b0c53e8ca99341268a2a063 147 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 2 142 13.613 T 10-03-2017 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CpPa04_RS06210 16ac395215a046f7dc19227da7a83302 846 Pfam PF00270 DEAD/DEAH box helicase 39 184 3.1E-10 T 10-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CpPa04_RS06210 16ac395215a046f7dc19227da7a83302 846 Pfam PF12029 Domain of unknown function (DUF3516) 380 840 1.3E-197 T 10-03-2017 IPR021904 Protein of unknown function DUF3516 CpPa04_RS06210 16ac395215a046f7dc19227da7a83302 846 SMART SM00487 33 214 1.5E-18 T 10-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CpPa04_RS06210 16ac395215a046f7dc19227da7a83302 846 Pfam PF00271 Helicase conserved C-terminal domain 289 369 9.2E-6 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS06210 16ac395215a046f7dc19227da7a83302 846 Gene3D G3DSA:3.40.50.300 224 378 2.1E-18 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06210 16ac395215a046f7dc19227da7a83302 846 SMART SM00490 283 369 4.9E-13 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS06210 16ac395215a046f7dc19227da7a83302 846 SUPERFAMILY SSF52540 289 378 2.29E-42 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06210 16ac395215a046f7dc19227da7a83302 846 SUPERFAMILY SSF52540 49 256 2.29E-42 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06210 16ac395215a046f7dc19227da7a83302 846 Gene3D G3DSA:3.40.50.300 28 198 1.9E-29 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08790 f57393664f135b822391f5997b1ca395 340 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 22 340 1.1E-118 T 10-03-2017 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CpPa04_RS08790 f57393664f135b822391f5997b1ca395 340 Pfam PF00268 Ribonucleotide reductase, small chain 24 294 8.2E-78 T 10-03-2017 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CpPa04_RS08790 f57393664f135b822391f5997b1ca395 340 SUPERFAMILY SSF47240 18 340 2.64E-86 T 10-03-2017 IPR009078 Ferritin-like superfamily CpPa04_RS08790 f57393664f135b822391f5997b1ca395 340 Gene3D G3DSA:1.10.620.20 19 294 6.9E-82 T 10-03-2017 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: R-HSA-499943 CpPa04_RS06445 def1b3ea91f1f96bd245aeba4ba729cd 767 SMART SM00316 693 764 7.9E-16 T 10-03-2017 IPR022967 RNA-binding domain, S1 CpPa04_RS06445 def1b3ea91f1f96bd245aeba4ba729cd 767 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 35 767 27.054 T 10-03-2017 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CpPa04_RS06445 def1b3ea91f1f96bd245aeba4ba729cd 767 Pfam PF01138 3' exoribonuclease family, domain 1 392 524 8.1E-17 T 10-03-2017 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CpPa04_RS06445 def1b3ea91f1f96bd245aeba4ba729cd 767 Pfam PF01138 3' exoribonuclease family, domain 1 46 177 8.4E-20 T 10-03-2017 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CpPa04_RS06445 def1b3ea91f1f96bd245aeba4ba729cd 767 Gene3D G3DSA:3.30.1370.10 622 693 2.9E-23 T 10-03-2017 IPR004088 K Homology domain, type 1 GO:0003723 CpPa04_RS06445 def1b3ea91f1f96bd245aeba4ba729cd 767 SUPERFAMILY SSF55666 518 617 5.73E-24 T 10-03-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CpPa04_RS06445 def1b3ea91f1f96bd245aeba4ba729cd 767 SUPERFAMILY SSF54791 625 712 2.95E-18 T 10-03-2017 IPR004088 K Homology domain, type 1 GO:0003723 CpPa04_RS06445 def1b3ea91f1f96bd245aeba4ba729cd 767 SUPERFAMILY SSF54211 37 177 6.58E-47 T 10-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CpPa04_RS06445 def1b3ea91f1f96bd245aeba4ba729cd 767 Pfam PF00013 KH domain 627 684 1.9E-12 T 10-03-2017 IPR004088 K Homology domain, type 1 GO:0003723 CpPa04_RS06445 def1b3ea91f1f96bd245aeba4ba729cd 767 Gene3D G3DSA:2.40.50.140 694 761 3.9E-19 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS06445 def1b3ea91f1f96bd245aeba4ba729cd 767 SUPERFAMILY SSF54211 361 559 1.92E-43 T 10-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CpPa04_RS06445 def1b3ea91f1f96bd245aeba4ba729cd 767 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 43 763 6.6E-261 T 10-03-2017 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CpPa04_RS06445 def1b3ea91f1f96bd245aeba4ba729cd 767 SUPERFAMILY SSF50249 693 761 1.07E-15 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS06445 def1b3ea91f1f96bd245aeba4ba729cd 767 Pfam PF00575 S1 RNA binding domain 692 761 4.1E-15 T 10-03-2017 IPR003029 S1 domain GO:0003676 CpPa04_RS06445 def1b3ea91f1f96bd245aeba4ba729cd 767 Gene3D G3DSA:1.10.10.400 290 382 7.1E-23 T 10-03-2017 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CpPa04_RS06445 def1b3ea91f1f96bd245aeba4ba729cd 767 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 306 387 1.6E-15 T 10-03-2017 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CpPa04_RS06445 def1b3ea91f1f96bd245aeba4ba729cd 767 PIRSF PIRSF005499 33 767 9.1E-282 T 10-03-2017 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CpPa04_RS06445 def1b3ea91f1f96bd245aeba4ba729cd 767 TIGRFAM TIGR02696 pppGpp_PNP: guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase 32 762 0.0 T 10-03-2017 IPR014069 Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase GO:0004654|GO:0005737|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CpPa04_RS06445 def1b3ea91f1f96bd245aeba4ba729cd 767 Gene3D G3DSA:3.30.230.70 36 287 3.0E-82 T 10-03-2017 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CpPa04_RS06445 def1b3ea91f1f96bd245aeba4ba729cd 767 Gene3D G3DSA:3.30.230.70 383 614 4.4E-81 T 10-03-2017 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CpPa04_RS06445 def1b3ea91f1f96bd245aeba4ba729cd 767 SUPERFAMILY SSF46915 304 388 3.4E-15 T 10-03-2017 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CpPa04_RS06445 def1b3ea91f1f96bd245aeba4ba729cd 767 SMART SM00322 623 688 2.8E-15 T 10-03-2017 IPR004087 K Homology domain GO:0003676 CpPa04_RS06445 def1b3ea91f1f96bd245aeba4ba729cd 767 SUPERFAMILY SSF55666 179 299 2.5E-22 T 10-03-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CpPa04_RS09485 d590a4724d9585b19b47ef60bc4140ea 181 SUPERFAMILY SSF53271 7 177 7.87E-35 T 10-03-2017 IPR029057 Phosphoribosyltransferase-like CpPa04_RS09485 d590a4724d9585b19b47ef60bc4140ea 181 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 181 25.029 T 10-03-2017 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CpPa04_RS09485 d590a4724d9585b19b47ef60bc4140ea 181 Gene3D G3DSA:3.40.50.2020 6 178 6.8E-53 T 10-03-2017 IPR029057 Phosphoribosyltransferase-like CpPa04_RS09485 d590a4724d9585b19b47ef60bc4140ea 181 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 19 178 1.1E-33 T 10-03-2017 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CpPa04_RS09485 d590a4724d9585b19b47ef60bc4140ea 181 Pfam PF00156 Phosphoribosyl transferase domain 67 161 4.3E-11 T 10-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 CpPa04_RS06655 ecc6d12f6831c82b1fca3d5736806cee 275 Gene3D G3DSA:3.30.479.20 238 273 5.5E-20 T 10-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CpPa04_RS06655 ecc6d12f6831c82b1fca3d5736806cee 275 Gene3D G3DSA:3.30.479.20 145 189 5.5E-20 T 10-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CpPa04_RS06655 ecc6d12f6831c82b1fca3d5736806cee 275 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 273 4.5E-77 T 10-03-2017 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CpPa04_RS06655 ecc6d12f6831c82b1fca3d5736806cee 275 SUPERFAMILY SSF46934 5 55 9.74E-16 T 10-03-2017 IPR009060 UBA-like GO:0005515 CpPa04_RS06655 ecc6d12f6831c82b1fca3d5736806cee 275 ProSitePatterns PS01127 Elongation factor Ts signature 2. 71 81 - T 10-03-2017 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CpPa04_RS06655 ecc6d12f6831c82b1fca3d5736806cee 275 Hamap MF_00050 Elongation factor Ts [tsf]. 1 275 65.242 T 10-03-2017 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CpPa04_RS06655 ecc6d12f6831c82b1fca3d5736806cee 275 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 10-03-2017 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CpPa04_RS06655 ecc6d12f6831c82b1fca3d5736806cee 275 SUPERFAMILY SSF54713 57 88 1.72E-39 T 10-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CpPa04_RS06655 ecc6d12f6831c82b1fca3d5736806cee 275 SUPERFAMILY SSF54713 177 273 1.72E-39 T 10-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CpPa04_RS06655 ecc6d12f6831c82b1fca3d5736806cee 275 Gene3D G3DSA:1.10.286.20 194 237 1.4E-20 T 10-03-2017 CpPa04_RS06655 ecc6d12f6831c82b1fca3d5736806cee 275 Gene3D G3DSA:1.10.8.10 3 55 7.8E-24 T 10-03-2017 CpPa04_RS06655 ecc6d12f6831c82b1fca3d5736806cee 275 Pfam PF00889 Elongation factor TS 68 274 3.1E-65 T 10-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CpPa04_RS06655 ecc6d12f6831c82b1fca3d5736806cee 275 Gene3D G3DSA:3.30.479.20 58 141 1.0E-13 T 10-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CpPa04_RS09145 b906c6d2dd8abf30c98f39d95087ad99 394 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 298 312 4.9E-22 T 10-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CpPa04_RS09145 b906c6d2dd8abf30c98f39d95087ad99 394 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 283 297 4.9E-22 T 10-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CpPa04_RS09145 b906c6d2dd8abf30c98f39d95087ad99 394 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 92 111 4.9E-22 T 10-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CpPa04_RS09145 b906c6d2dd8abf30c98f39d95087ad99 394 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 234 256 4.9E-22 T 10-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CpPa04_RS09145 b906c6d2dd8abf30c98f39d95087ad99 394 SUPERFAMILY SSF56601 61 392 7.64E-53 T 10-03-2017 IPR012338 Beta-lactamase/transpeptidase-like CpPa04_RS09145 b906c6d2dd8abf30c98f39d95087ad99 394 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 204 388 3.5E-40 T 10-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CpPa04_RS09145 b906c6d2dd8abf30c98f39d95087ad99 394 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 54 193 3.1E-28 T 10-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CpPa04_RS09145 b906c6d2dd8abf30c98f39d95087ad99 394 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 204 374 4.3E-34 T 10-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CpPa04_RS09145 b906c6d2dd8abf30c98f39d95087ad99 394 Gene3D G3DSA:3.40.710.10 229 393 5.3E-57 T 10-03-2017 IPR012338 Beta-lactamase/transpeptidase-like CpPa04_RS09145 b906c6d2dd8abf30c98f39d95087ad99 394 Gene3D G3DSA:3.40.710.10 75 126 5.3E-57 T 10-03-2017 IPR012338 Beta-lactamase/transpeptidase-like CpPa04_RS01990 984980c64cb8990de44ceee1a3ec7a13 72 SUPERFAMILY SSF50249 1 71 9.64E-28 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS01990 984980c64cb8990de44ceee1a3ec7a13 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.014 T 10-03-2017 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CpPa04_RS01990 984980c64cb8990de44ceee1a3ec7a13 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 3.1E-29 T 10-03-2017 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 CpPa04_RS01990 984980c64cb8990de44ceee1a3ec7a13 72 Gene3D G3DSA:2.40.50.140 1 72 1.2E-39 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS01990 984980c64cb8990de44ceee1a3ec7a13 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 9.6E-38 T 10-03-2017 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CpPa04_RS01990 984980c64cb8990de44ceee1a3ec7a13 72 SMART SM00316 4 72 0.0073 T 10-03-2017 IPR022967 RNA-binding domain, S1 CpPa04_RS05600 c33794be42126e63a33a0739f44fc7b8 531 SUPERFAMILY SSF55347 222 529 7.52E-110 T 10-03-2017 CpPa04_RS05600 c33794be42126e63a33a0739f44fc7b8 531 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 47 530 2.3E-194 T 10-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CpPa04_RS05600 c33794be42126e63a33a0739f44fc7b8 531 Gene3D G3DSA:3.30.360.10 232 529 2.8E-117 T 10-03-2017 CpPa04_RS05600 c33794be42126e63a33a0739f44fc7b8 531 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 222 228 - T 10-03-2017 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CpPa04_RS05600 c33794be42126e63a33a0739f44fc7b8 531 Gene3D G3DSA:3.40.50.720 45 231 2.0E-66 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS05600 c33794be42126e63a33a0739f44fc7b8 531 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 234 529 2.6E-109 T 10-03-2017 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CpPa04_RS05600 c33794be42126e63a33a0739f44fc7b8 531 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 45 530 83.943 T 10-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CpPa04_RS05600 c33794be42126e63a33a0739f44fc7b8 531 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 49 232 1.7E-61 T 10-03-2017 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CpPa04_RS05600 c33794be42126e63a33a0739f44fc7b8 531 SUPERFAMILY SSF51735 35 235 3.54E-60 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS05600 c33794be42126e63a33a0739f44fc7b8 531 PIRSF PIRSF000110 14 531 4.1E-173 T 10-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CpPa04_RS05600 c33794be42126e63a33a0739f44fc7b8 531 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 188 201 1.1E-48 T 10-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CpPa04_RS05600 c33794be42126e63a33a0739f44fc7b8 531 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 264 281 1.1E-48 T 10-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CpPa04_RS05600 c33794be42126e63a33a0739f44fc7b8 531 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 282 298 1.1E-48 T 10-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CpPa04_RS05600 c33794be42126e63a33a0739f44fc7b8 531 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 212 240 1.1E-48 T 10-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CpPa04_RS05600 c33794be42126e63a33a0739f44fc7b8 531 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 371 397 1.1E-48 T 10-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CpPa04_RS07280 fd455a6827a7c17aec5394d7c170f749 505 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 10-03-2017 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CpPa04_RS07280 fd455a6827a7c17aec5394d7c170f749 505 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 1.8E-45 T 10-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CpPa04_RS07280 fd455a6827a7c17aec5394d7c170f749 505 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 1.8E-45 T 10-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CpPa04_RS07280 fd455a6827a7c17aec5394d7c170f749 505 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 1.8E-45 T 10-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CpPa04_RS07280 fd455a6827a7c17aec5394d7c170f749 505 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 1.8E-45 T 10-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CpPa04_RS07280 fd455a6827a7c17aec5394d7c170f749 505 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 1.8E-45 T 10-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CpPa04_RS07280 fd455a6827a7c17aec5394d7c170f749 505 SUPERFAMILY SSF53187 184 500 1.3E-108 T 10-03-2017 CpPa04_RS07280 fd455a6827a7c17aec5394d7c170f749 505 Gene3D G3DSA:3.40.630.10 182 503 5.2E-126 T 10-03-2017 CpPa04_RS07280 fd455a6827a7c17aec5394d7c170f749 505 Gene3D G3DSA:3.40.220.10 27 181 4.2E-24 T 10-03-2017 CpPa04_RS07280 fd455a6827a7c17aec5394d7c170f749 505 SUPERFAMILY SSF52949 27 151 4.36E-23 T 10-03-2017 CpPa04_RS07280 fd455a6827a7c17aec5394d7c170f749 505 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 32 148 1.7E-22 T 10-03-2017 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CpPa04_RS07280 fd455a6827a7c17aec5394d7c170f749 505 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 189 494 3.2E-109 T 10-03-2017 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CpPa04_RS07280 fd455a6827a7c17aec5394d7c170f749 505 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 14 503 32.81 T 10-03-2017 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 CpPa04_RS06385 19d18f12305e863cd6ddde565068663b 280 Pfam PF04012 PspA/IM30 family 3 239 4.3E-47 T 10-03-2017 IPR007157 PspA/IM30 CpPa04_RS05810 30d64d98fb39acffc0c6df74fcb7df74 428 Hamap MF_00300 Chorismate synthase [aroC]. 26 403 35.16 T 10-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CpPa04_RS05810 30d64d98fb39acffc0c6df74fcb7df74 428 TIGRFAM TIGR00033 aroC: chorismate synthase 26 401 1.3E-126 T 10-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CpPa04_RS05810 30d64d98fb39acffc0c6df74fcb7df74 428 ProSitePatterns PS00789 Chorismate synthase signature 3. 370 386 - T 10-03-2017 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CpPa04_RS05810 30d64d98fb39acffc0c6df74fcb7df74 428 Pfam PF01264 Chorismate synthase 26 396 2.0E-118 T 10-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CpPa04_RS05810 30d64d98fb39acffc0c6df74fcb7df74 428 ProSitePatterns PS00788 Chorismate synthase signature 2. 163 179 - T 10-03-2017 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CpPa04_RS05810 30d64d98fb39acffc0c6df74fcb7df74 428 Gene3D G3DSA:3.60.150.10 25 422 5.2E-155 T 10-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CpPa04_RS05810 30d64d98fb39acffc0c6df74fcb7df74 428 PIRSF PIRSF001456 19 413 8.2E-130 T 10-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CpPa04_RS05810 30d64d98fb39acffc0c6df74fcb7df74 428 SUPERFAMILY SSF103263 24 419 1.57E-136 T 10-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CpPa04_RS06275 35f85af8cd0e71289f858a2a8faa31cd 682 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 178 262 1.1E-26 T 10-03-2017 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 CpPa04_RS06275 35f85af8cd0e71289f858a2a8faa31cd 682 Gene3D G3DSA:3.40.930.10 3 147 2.0E-38 T 10-03-2017 IPR002178 PTS EIIA type-2 domain CpPa04_RS06275 35f85af8cd0e71289f858a2a8faa31cd 682 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 179 268 1.3E-17 T 10-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CpPa04_RS06275 35f85af8cd0e71289f858a2a8faa31cd 682 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 306 660 9.4E-94 T 10-03-2017 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 CpPa04_RS06275 35f85af8cd0e71289f858a2a8faa31cd 682 SUPERFAMILY SSF55804 3 146 2.22E-31 T 10-03-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CpPa04_RS06275 35f85af8cd0e71289f858a2a8faa31cd 682 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 132 1.0E-32 T 10-03-2017 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 CpPa04_RS06275 35f85af8cd0e71289f858a2a8faa31cd 682 Gene3D G3DSA:3.40.50.2300 173 273 2.7E-35 T 10-03-2017 CpPa04_RS06275 35f85af8cd0e71289f858a2a8faa31cd 682 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 146 2.2E-31 T 10-03-2017 IPR002178 PTS EIIA type-2 domain CpPa04_RS06275 35f85af8cd0e71289f858a2a8faa31cd 682 SUPERFAMILY SSF52794 176 272 7.85E-28 T 10-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CpPa04_RS06275 35f85af8cd0e71289f858a2a8faa31cd 682 Pfam PF02378 Phosphotransferase system, EIIC 314 612 7.6E-10 T 10-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CpPa04_RS10190 20638c9629ff4598e68001a7b6b80309 441 Pfam PF07730 Histidine kinase 233 306 2.2E-14 T 10-03-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CpPa04_RS10190 20638c9629ff4598e68001a7b6b80309 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 4.1E-5 T 10-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CpPa04_RS10190 20638c9629ff4598e68001a7b6b80309 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 436 4.1E-5 T 10-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CpPa04_RS10190 20638c9629ff4598e68001a7b6b80309 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 417 4.1E-5 T 10-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CpPa04_RS10190 20638c9629ff4598e68001a7b6b80309 441 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 436 7.1E-8 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS10190 20638c9629ff4598e68001a7b6b80309 441 SUPERFAMILY SSF55874 320 436 1.18E-17 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS10190 20638c9629ff4598e68001a7b6b80309 441 PIRSF PIRSF037434 38 441 2.0E-140 T 10-03-2017 IPR017205 Signal transduction histidine kinase, ChrS CpPa04_RS10190 20638c9629ff4598e68001a7b6b80309 441 SMART SM00387 341 439 5.6E-6 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS10190 20638c9629ff4598e68001a7b6b80309 441 Gene3D G3DSA:3.30.565.10 340 439 2.5E-11 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS08815 9fafb6ca1ac2c6358d7209f007672077 157 Pfam PF00255 Glutathione peroxidase 5 111 1.1E-36 T 10-03-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CpPa04_RS08815 9fafb6ca1ac2c6358d7209f007672077 157 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 10-03-2017 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 CpPa04_RS08815 9fafb6ca1ac2c6358d7209f007672077 157 Gene3D G3DSA:3.40.30.10 3 146 5.3E-55 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS08815 9fafb6ca1ac2c6358d7209f007672077 157 SUPERFAMILY SSF52833 3 147 4.12E-48 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS08815 9fafb6ca1ac2c6358d7209f007672077 157 PIRSF PIRSF000303 1 155 2.2E-55 T 10-03-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CpPa04_RS08815 9fafb6ca1ac2c6358d7209f007672077 157 PRINTS PR01011 Glutathione peroxidase family signature 22 39 3.5E-15 T 10-03-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CpPa04_RS08815 9fafb6ca1ac2c6358d7209f007672077 157 PRINTS PR01011 Glutathione peroxidase family signature 57 73 3.5E-15 T 10-03-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CpPa04_RS08815 9fafb6ca1ac2c6358d7209f007672077 157 PRINTS PR01011 Glutathione peroxidase family signature 117 126 3.5E-15 T 10-03-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CpPa04_RS04150 5e51d1f6f866b6eba8f1aedd8c68a4ea 1031 SUPERFAMILY SSF52540 536 769 3.26E-56 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04150 5e51d1f6f866b6eba8f1aedd8c68a4ea 1031 Pfam PF12419 SNF2 Helicase protein 331 454 1.8E-31 T 10-03-2017 IPR022138 Helicase SWF/SNF-related CpPa04_RS04150 5e51d1f6f866b6eba8f1aedd8c68a4ea 1031 Pfam PF00176 SNF2 family N-terminal domain 569 838 2.1E-61 T 10-03-2017 IPR000330 SNF2-related, N-terminal domain GO:0005524 CpPa04_RS04150 5e51d1f6f866b6eba8f1aedd8c68a4ea 1031 SMART SM00490 886 970 1.9E-17 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS04150 5e51d1f6f866b6eba8f1aedd8c68a4ea 1031 SUPERFAMILY SSF52540 773 1026 3.33E-57 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04150 5e51d1f6f866b6eba8f1aedd8c68a4ea 1031 SMART SM00487 549 742 1.8E-34 T 10-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CpPa04_RS04150 5e51d1f6f866b6eba8f1aedd8c68a4ea 1031 Pfam PF00271 Helicase conserved C-terminal domain 857 970 6.5E-13 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS04150 5e51d1f6f866b6eba8f1aedd8c68a4ea 1031 Gene3D G3DSA:3.40.50.300 545 725 6.9E-26 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04150 5e51d1f6f866b6eba8f1aedd8c68a4ea 1031 Gene3D G3DSA:3.40.50.300 853 1004 2.2E-17 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03565 69ec715ddcdfdb3566d0b8f78e57423c 205 Gene3D G3DSA:2.170.120.20 99 189 1.1E-19 T 10-03-2017 IPR020057 Ribosomal protein L25, beta domain CpPa04_RS03565 69ec715ddcdfdb3566d0b8f78e57423c 205 Gene3D G3DSA:2.40.240.10 6 96 6.9E-25 T 10-03-2017 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CpPa04_RS03565 69ec715ddcdfdb3566d0b8f78e57423c 205 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 179 1.4E-42 T 10-03-2017 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CpPa04_RS03565 69ec715ddcdfdb3566d0b8f78e57423c 205 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 182 22.944 T 10-03-2017 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CpPa04_RS03565 69ec715ddcdfdb3566d0b8f78e57423c 205 SUPERFAMILY SSF50715 5 188 4.88E-45 T 10-03-2017 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CpPa04_RS03565 69ec715ddcdfdb3566d0b8f78e57423c 205 Pfam PF01386 Ribosomal L25p family 7 94 2.2E-20 T 10-03-2017 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CpPa04_RS03565 69ec715ddcdfdb3566d0b8f78e57423c 205 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 102 179 2.1E-16 T 10-03-2017 IPR020057 Ribosomal protein L25, beta domain CpPa04_RS03565 69ec715ddcdfdb3566d0b8f78e57423c 205 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 7 97 5.0E-41 T 10-03-2017 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CpPa04_RS08295 7e1882aac1284e2f6032d4d3a63d1226 332 Pfam PF00107 Zinc-binding dehydrogenase 157 291 2.2E-23 T 10-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CpPa04_RS08295 7e1882aac1284e2f6032d4d3a63d1226 332 Gene3D G3DSA:3.40.50.720 140 300 5.1E-65 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS08295 7e1882aac1284e2f6032d4d3a63d1226 332 Gene3D G3DSA:3.90.180.10 1 139 1.3E-49 T 10-03-2017 IPR011032 GroES-like CpPa04_RS08295 7e1882aac1284e2f6032d4d3a63d1226 332 Pfam PF16884 N-terminal domain of oxidoreductase 6 108 1.2E-37 T 10-03-2017 CpPa04_RS08295 7e1882aac1284e2f6032d4d3a63d1226 332 SUPERFAMILY SSF51735 122 293 1.91E-48 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS08295 7e1882aac1284e2f6032d4d3a63d1226 332 SMART SM00829 17 330 2.4E-6 T 10-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CpPa04_RS08295 7e1882aac1284e2f6032d4d3a63d1226 332 SUPERFAMILY SSF50129 1 140 6.97E-36 T 10-03-2017 IPR011032 GroES-like CpPa04_RS09260 b6df6c00096c70098e2fb32cfe0aa8ec 430 Pfam PF09594 Protein of unknown function (DUF2029) 71 301 6.8E-45 T 10-03-2017 IPR018584 Glycosyltransferase family 87 GO:0016758 CpPa04_RS06880 c2570cb0b69d44b5c3b3d1367ed61352 264 Gene3D G3DSA:3.20.20.70 6 257 3.5E-106 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS06880 c2570cb0b69d44b5c3b3d1367ed61352 264 SUPERFAMILY SSF51366 4 257 2.75E-79 T 10-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CpPa04_RS06880 c2570cb0b69d44b5c3b3d1367ed61352 264 Pfam PF00977 Histidine biosynthesis protein 6 241 1.4E-86 T 10-03-2017 IPR006062 Histidine biosynthesis GO:0000105 CpPa04_RS06880 c2570cb0b69d44b5c3b3d1367ed61352 264 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 257 47.612 T 10-03-2017 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CpPa04_RS06880 c2570cb0b69d44b5c3b3d1367ed61352 264 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 3 257 1.3E-110 T 10-03-2017 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CpPa04_RS01065 889e9673e52dca9d40129a2b114ebef4 268 TIGRFAM TIGR01083 nth: endonuclease III 37 227 9.5E-75 T 10-03-2017 IPR005759 Endonuclease III GO:0003906|GO:0006284 CpPa04_RS01065 889e9673e52dca9d40129a2b114ebef4 268 SMART SM00478 71 218 1.2E-57 T 10-03-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CpPa04_RS01065 889e9673e52dca9d40129a2b114ebef4 268 Pfam PF00633 Helix-hairpin-helix motif 133 159 3.8E-8 T 10-03-2017 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CpPa04_RS01065 889e9673e52dca9d40129a2b114ebef4 268 SMART SM00525 219 239 0.001 T 10-03-2017 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CpPa04_RS01065 889e9673e52dca9d40129a2b114ebef4 268 Gene3D G3DSA:1.10.340.30 55 155 8.6E-34 T 10-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CpPa04_RS01065 889e9673e52dca9d40129a2b114ebef4 268 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 67 201 9.8E-22 T 10-03-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CpPa04_RS01065 889e9673e52dca9d40129a2b114ebef4 268 SUPERFAMILY SSF48150 38 239 6.28E-62 T 10-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CpPa04_RS01065 889e9673e52dca9d40129a2b114ebef4 268 Hamap MF_00942 Endonuclease III [nth]. 33 242 36.498 T 10-03-2017 IPR005759 Endonuclease III GO:0003906|GO:0006284 CpPa04_RS01065 889e9673e52dca9d40129a2b114ebef4 268 Gene3D G3DSA:1.10.1670.10 156 239 7.3E-30 T 10-03-2017 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CpPa04_RS04980 feffc2c2b396e331efad25b7de902895 540 Gene3D G3DSA:3.30.300.20 460 534 1.2E-27 T 10-03-2017 IPR015946 K homology domain-like, alpha/beta CpPa04_RS04980 feffc2c2b396e331efad25b7de902895 540 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 107 238 5.6E-21 T 10-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CpPa04_RS04980 feffc2c2b396e331efad25b7de902895 540 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 278 435 1.0E-19 T 10-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CpPa04_RS04980 feffc2c2b396e331efad25b7de902895 540 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 107 532 8.5E-153 T 10-03-2017 IPR016484 GTP-binding protein EngA GO:0005525 CpPa04_RS04980 feffc2c2b396e331efad25b7de902895 540 SUPERFAMILY SSF52540 240 535 7.82E-58 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04980 feffc2c2b396e331efad25b7de902895 540 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 303 321 2.4E-8 T 10-03-2017 IPR006073 GTP binding domain GO:0005525 CpPa04_RS04980 feffc2c2b396e331efad25b7de902895 540 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 330 345 2.4E-8 T 10-03-2017 IPR006073 GTP binding domain GO:0005525 CpPa04_RS04980 feffc2c2b396e331efad25b7de902895 540 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 281 301 2.4E-8 T 10-03-2017 IPR006073 GTP binding domain GO:0005525 CpPa04_RS04980 feffc2c2b396e331efad25b7de902895 540 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 454 532 2.1E-25 T 10-03-2017 IPR032859 GTPase Der, C-terminal KH-domain-like CpPa04_RS04980 feffc2c2b396e331efad25b7de902895 540 Gene3D G3DSA:3.40.50.300 278 459 1.6E-48 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04980 feffc2c2b396e331efad25b7de902895 540 Gene3D G3DSA:3.40.50.300 103 271 2.3E-36 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04980 feffc2c2b396e331efad25b7de902895 540 Hamap MF_00195 GTPase Der [der]. 105 535 34.114 T 10-03-2017 IPR016484 GTP-binding protein EngA GO:0005525 CpPa04_RS04980 feffc2c2b396e331efad25b7de902895 540 SUPERFAMILY SSF52540 107 271 4.06E-38 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04980 feffc2c2b396e331efad25b7de902895 540 PIRSF PIRSF006485 104 540 4.0E-178 T 10-03-2017 IPR016484 GTP-binding protein EngA GO:0005525 CpPa04_RS04980 feffc2c2b396e331efad25b7de902895 540 Pfam PF01926 50S ribosome-binding GTPase 108 222 2.7E-22 T 10-03-2017 IPR006073 GTP binding domain GO:0005525 CpPa04_RS04980 feffc2c2b396e331efad25b7de902895 540 Pfam PF01926 50S ribosome-binding GTPase 280 398 6.3E-22 T 10-03-2017 IPR006073 GTP binding domain GO:0005525 CpPa04_RS01825 e2167e5b5ea1258e68ebe19bbaa97ed5 92 SUPERFAMILY SSF50249 14 91 3.47E-29 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS01825 e2167e5b5ea1258e68ebe19bbaa97ed5 92 ProSitePatterns PS00056 Ribosomal protein S17 signature. 65 77 - T 10-03-2017 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01825 e2167e5b5ea1258e68ebe19bbaa97ed5 92 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 12 90 22.358 T 10-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01825 e2167e5b5ea1258e68ebe19bbaa97ed5 92 Gene3D G3DSA:2.40.50.140 14 91 2.1E-33 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS01825 e2167e5b5ea1258e68ebe19bbaa97ed5 92 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 13 85 6.0E-34 T 10-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01825 e2167e5b5ea1258e68ebe19bbaa97ed5 92 PRINTS PR00973 Ribosomal protein S17 family signature 33 56 2.5E-10 T 10-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01825 e2167e5b5ea1258e68ebe19bbaa97ed5 92 PRINTS PR00973 Ribosomal protein S17 family signature 65 75 2.5E-10 T 10-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01825 e2167e5b5ea1258e68ebe19bbaa97ed5 92 PRINTS PR00973 Ribosomal protein S17 family signature 75 82 2.5E-10 T 10-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01825 e2167e5b5ea1258e68ebe19bbaa97ed5 92 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 14 85 4.5E-30 T 10-03-2017 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01825 e2167e5b5ea1258e68ebe19bbaa97ed5 92 Pfam PF00366 Ribosomal protein S17 19 86 2.1E-29 T 10-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS04585 cfe99f18544d48551ba6f9530b97b437 377 Gene3D G3DSA:3.40.50.1820 129 301 1.2E-29 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS04585 cfe99f18544d48551ba6f9530b97b437 377 Gene3D G3DSA:3.40.50.1820 336 374 1.2E-29 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS04585 cfe99f18544d48551ba6f9530b97b437 377 SUPERFAMILY SSF53474 148 299 3.56E-24 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS04585 cfe99f18544d48551ba6f9530b97b437 377 SUPERFAMILY SSF53474 334 373 3.56E-24 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS04585 cfe99f18544d48551ba6f9530b97b437 377 Pfam PF10503 Esterase PHB depolymerase 214 265 4.8E-9 T 10-03-2017 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 CpPa04_RS10300 8516e93ccaf1ecbe34b58398bf9f8856 492 SUPERFAMILY SSF52540 234 477 9.72E-51 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS10300 8516e93ccaf1ecbe34b58398bf9f8856 492 Pfam PF00772 DnaB-like helicase N terminal domain 56 158 9.0E-36 T 10-03-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CpPa04_RS10300 8516e93ccaf1ecbe34b58398bf9f8856 492 Gene3D G3DSA:1.10.860.10 57 159 7.9E-40 T 10-03-2017 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CpPa04_RS10300 8516e93ccaf1ecbe34b58398bf9f8856 492 SMART SM00382 251 448 2.2E-4 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS10300 8516e93ccaf1ecbe34b58398bf9f8856 492 SUPERFAMILY SSF48024 55 166 9.02E-39 T 10-03-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CpPa04_RS10300 8516e93ccaf1ecbe34b58398bf9f8856 492 Pfam PF03796 DnaB-like helicase C terminal domain 234 487 6.8E-100 T 10-03-2017 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 CpPa04_RS10300 8516e93ccaf1ecbe34b58398bf9f8856 492 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 57 490 8.2E-158 T 10-03-2017 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 CpPa04_RS10300 8516e93ccaf1ecbe34b58398bf9f8856 492 Gene3D G3DSA:3.40.50.300 218 490 3.6E-109 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07490 99595ca5e5fb6d314a192e2914528efa 480 Gene3D G3DSA:3.90.1380.10 2 88 4.2E-29 T 10-03-2017 IPR029144 Threonine synthase, N-terminal CpPa04_RS07490 99595ca5e5fb6d314a192e2914528efa 480 Pfam PF14821 Threonine synthase N terminus 2 84 7.4E-26 T 10-03-2017 IPR029144 Threonine synthase, N-terminal CpPa04_RS07490 99595ca5e5fb6d314a192e2914528efa 480 Gene3D G3DSA:3.40.50.1100 117 209 3.6E-7 T 10-03-2017 CpPa04_RS07490 99595ca5e5fb6d314a192e2914528efa 480 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 101 358 9.9E-13 T 10-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CpPa04_RS07490 99595ca5e5fb6d314a192e2914528efa 480 SUPERFAMILY SSF53686 2 473 3.74E-142 T 10-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CpPa04_RS07490 99595ca5e5fb6d314a192e2914528efa 480 Gene3D G3DSA:3.40.50.1100 210 448 5.7E-88 T 10-03-2017 CpPa04_RS07490 99595ca5e5fb6d314a192e2914528efa 480 TIGRFAM TIGR00260 thrC: threonine synthase 70 436 2.0E-67 T 10-03-2017 IPR004450 Threonine synthase-like CpPa04_RS07490 99595ca5e5fb6d314a192e2914528efa 480 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 10-03-2017 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CpPa04_RS08400 82dca8222283c4409674b4d0eb9da763 297 Hamap MF_00258 Glutamate racemase [murI]. 34 287 37.472 T 10-03-2017 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS08400 82dca8222283c4409674b4d0eb9da763 297 TIGRFAM TIGR00067 glut_race: glutamate racemase 36 283 8.5E-68 T 10-03-2017 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS08400 82dca8222283c4409674b4d0eb9da763 297 Gene3D G3DSA:3.40.50.1860 33 201 2.3E-56 T 10-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS08400 82dca8222283c4409674b4d0eb9da763 297 Pfam PF01177 Asp/Glu/Hydantoin racemase 36 243 3.0E-35 T 10-03-2017 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS08400 82dca8222283c4409674b4d0eb9da763 297 SUPERFAMILY SSF53681 35 137 3.6E-36 T 10-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS08400 82dca8222283c4409674b4d0eb9da763 297 SUPERFAMILY SSF53681 139 292 9.32E-39 T 10-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS08400 82dca8222283c4409674b4d0eb9da763 297 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 209 219 - T 10-03-2017 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS08400 82dca8222283c4409674b4d0eb9da763 297 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 100 108 - T 10-03-2017 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS01290 2f07b402d887ec382a19c7a6fef31259 698 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 12 693 8.5E-301 T 10-03-2017 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CpPa04_RS01290 2f07b402d887ec382a19c7a6fef31259 698 SUPERFAMILY SSF51998 6 694 1.42E-228 T 10-03-2017 CpPa04_RS01290 2f07b402d887ec382a19c7a6fef31259 698 Pfam PF01228 Glycine radical 629 693 8.1E-13 T 10-03-2017 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CpPa04_RS01290 2f07b402d887ec382a19c7a6fef31259 698 PIRSF PIRSF000379 9 697 2.3E-290 T 10-03-2017 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CpPa04_RS01290 2f07b402d887ec382a19c7a6fef31259 698 Gene3D G3DSA:3.20.70.20 6 694 4.2E-248 T 10-03-2017 CpPa04_RS01290 2f07b402d887ec382a19c7a6fef31259 698 Pfam PF02901 Pyruvate formate lyase-like 23 613 3.3E-190 T 10-03-2017 IPR004184 Pyruvate formate lyase domain GO:0003824 CpPa04_RS01885 2970ee182dd458f32ef636be50c68457 132 SUPERFAMILY SSF56047 3 132 1.44E-45 T 10-03-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01885 2970ee182dd458f32ef636be50c68457 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 32.057 T 10-03-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01885 2970ee182dd458f32ef636be50c68457 132 Gene3D G3DSA:3.30.1370.30 2 72 1.2E-29 T 10-03-2017 CpPa04_RS01885 2970ee182dd458f32ef636be50c68457 132 Gene3D G3DSA:3.30.1490.10 76 132 1.5E-28 T 10-03-2017 CpPa04_RS01885 2970ee182dd458f32ef636be50c68457 132 Pfam PF00410 Ribosomal protein S8 5 132 1.9E-51 T 10-03-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS09785 8d713b67140858c07e1888e8786804e4 428 Pfam PF00155 Aminotransferase class I and II 58 405 2.2E-42 T 10-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CpPa04_RS09785 8d713b67140858c07e1888e8786804e4 428 Gene3D G3DSA:3.90.1150.10 305 427 1.1E-37 T 10-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CpPa04_RS09785 8d713b67140858c07e1888e8786804e4 428 Gene3D G3DSA:3.40.640.10 74 304 1.0E-64 T 10-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CpPa04_RS09785 8d713b67140858c07e1888e8786804e4 428 SUPERFAMILY SSF53383 29 424 2.02E-91 T 10-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase CpPa04_RS02555 5abfabacc09caa0e5811b93a80a01e28 362 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 290 324 7.3E-5 T 10-03-2017 IPR001451 Hexapeptide repeat CpPa04_RS02555 5abfabacc09caa0e5811b93a80a01e28 362 SUPERFAMILY SSF53448 281 330 4.65E-73 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS02555 5abfabacc09caa0e5811b93a80a01e28 362 SUPERFAMILY SSF53448 12 244 4.65E-73 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS02555 5abfabacc09caa0e5811b93a80a01e28 362 Pfam PF00483 Nucleotidyl transferase 12 238 1.8E-41 T 10-03-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CpPa04_RS02555 5abfabacc09caa0e5811b93a80a01e28 362 Gene3D G3DSA:2.160.10.10 287 351 1.2E-9 T 10-03-2017 CpPa04_RS02555 5abfabacc09caa0e5811b93a80a01e28 362 Gene3D G3DSA:3.90.550.10 11 286 8.5E-79 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS03475 d32f6022a980606d4e135b16db790a5f 600 Pfam PF12848 ABC transporter 193 258 4.2E-6 T 10-03-2017 IPR032781 ABC-transporter extension domain CpPa04_RS03475 d32f6022a980606d4e135b16db790a5f 600 SUPERFAMILY SSF52540 273 480 3.37E-41 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03475 d32f6022a980606d4e135b16db790a5f 600 SUPERFAMILY SSF52540 4 203 1.07E-46 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03475 d32f6022a980606d4e135b16db790a5f 600 Pfam PF00005 ABC transporter 20 154 3.7E-25 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS03475 d32f6022a980606d4e135b16db790a5f 600 Pfam PF00005 ABC transporter 303 432 2.4E-21 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS03475 d32f6022a980606d4e135b16db790a5f 600 ProSitePatterns PS00211 ABC transporters family signature. 126 140 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS03475 d32f6022a980606d4e135b16db790a5f 600 Gene3D G3DSA:3.40.50.300 4 229 2.0E-50 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03475 d32f6022a980606d4e135b16db790a5f 600 Gene3D G3DSA:3.40.50.300 283 496 9.3E-43 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03475 d32f6022a980606d4e135b16db790a5f 600 SMART SM00382 29 199 1.1E-6 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS03475 d32f6022a980606d4e135b16db790a5f 600 SMART SM00382 311 476 2.1E-11 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS03475 d32f6022a980606d4e135b16db790a5f 600 Pfam PF16326 ABC transporter C-terminal domain 525 595 1.8E-8 T 10-03-2017 IPR032524 ABC transporter Uup, C-terminal GO:0003677 CpPa04_RS10455 72749f3ce88f4dbc3233395a2258e32b 383 PIRSF PIRSF038994 16 382 4.6E-75 T 10-03-2017 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 CpPa04_RS10455 72749f3ce88f4dbc3233395a2258e32b 383 SUPERFAMILY SSF51556 49 350 9.53E-65 T 10-03-2017 IPR032466 Metal-dependent hydrolase CpPa04_RS10455 72749f3ce88f4dbc3233395a2258e32b 383 Gene3D G3DSA:3.20.20.140 52 331 1.3E-73 T 10-03-2017 CpPa04_RS10455 72749f3ce88f4dbc3233395a2258e32b 383 Pfam PF01979 Amidohydrolase family 45 379 2.4E-10 T 10-03-2017 IPR006680 Amidohydrolase-related GO:0016787 CpPa04_RS10455 72749f3ce88f4dbc3233395a2258e32b 383 Gene3D G3DSA:2.30.40.10 332 369 1.1E-4 T 10-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CpPa04_RS10455 72749f3ce88f4dbc3233395a2258e32b 383 SUPERFAMILY SSF51338 7 48 1.96E-5 T 10-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CpPa04_RS10455 72749f3ce88f4dbc3233395a2258e32b 383 SUPERFAMILY SSF51338 352 379 1.96E-5 T 10-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CpPa04_RS04165 016850379eea27559b29a02aec6e5a1f 857 SUPERFAMILY SSF52540 1 123 4.93E-15 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04165 016850379eea27559b29a02aec6e5a1f 857 SUPERFAMILY SSF52540 749 841 4.93E-15 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04165 016850379eea27559b29a02aec6e5a1f 857 Gene3D G3DSA:3.40.50.300 256 339 8.0E-14 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04165 016850379eea27559b29a02aec6e5a1f 857 Gene3D G3DSA:3.40.50.300 1 80 8.0E-14 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04165 016850379eea27559b29a02aec6e5a1f 857 Gene3D G3DSA:3.40.50.300 518 519 8.0E-14 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04165 016850379eea27559b29a02aec6e5a1f 857 Gene3D G3DSA:3.40.50.300 756 840 8.0E-14 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04165 016850379eea27559b29a02aec6e5a1f 857 Gene3D G3DSA:3.40.50.300 213 214 8.0E-14 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04165 016850379eea27559b29a02aec6e5a1f 857 Gene3D G3DSA:3.40.50.300 137 138 8.0E-14 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04165 016850379eea27559b29a02aec6e5a1f 857 Pfam PF13175 AAA ATPase domain 1 360 2.2E-9 T 10-03-2017 CpPa04_RS09230 c79e02c01a8316a5c8cf1cbf6979cf33 952 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 794 916 1.9E-32 T 10-03-2017 IPR007182 Na+/H+ antiporter MnhB subunit-related protein CpPa04_RS09230 c79e02c01a8316a5c8cf1cbf6979cf33 952 Pfam PF13244 Domain of unknown function (DUF4040) 607 670 2.7E-21 T 10-03-2017 IPR025383 Domain of unknown function DUF4040 CpPa04_RS09230 c79e02c01a8316a5c8cf1cbf6979cf33 952 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 104 124 6.0E-34 T 10-03-2017 CpPa04_RS09230 c79e02c01a8316a5c8cf1cbf6979cf33 952 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 75 100 6.0E-34 T 10-03-2017 CpPa04_RS09230 c79e02c01a8316a5c8cf1cbf6979cf33 952 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 415 434 6.0E-34 T 10-03-2017 CpPa04_RS09230 c79e02c01a8316a5c8cf1cbf6979cf33 952 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 215 236 6.0E-34 T 10-03-2017 CpPa04_RS09230 c79e02c01a8316a5c8cf1cbf6979cf33 952 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 237 263 6.0E-34 T 10-03-2017 CpPa04_RS09230 c79e02c01a8316a5c8cf1cbf6979cf33 952 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 305 317 6.0E-34 T 10-03-2017 CpPa04_RS09230 c79e02c01a8316a5c8cf1cbf6979cf33 952 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 151 172 6.0E-34 T 10-03-2017 CpPa04_RS09230 c79e02c01a8316a5c8cf1cbf6979cf33 952 Pfam PF00361 Proton-conducting membrane transporter 127 405 6.1E-64 T 10-03-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CpPa04_RS09230 c79e02c01a8316a5c8cf1cbf6979cf33 952 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 61 103 2.8E-7 T 10-03-2017 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CpPa04_RS10110 29627f96c846cde80d5ef4a3a7f3bf1f 428 Pfam PF02885 Glycosyl transferase family, helical bundle domain 8 70 6.8E-17 T 10-03-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CpPa04_RS10110 29627f96c846cde80d5ef4a3a7f3bf1f 428 SUPERFAMILY SSF47648 5 73 3.4E-20 T 10-03-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CpPa04_RS10110 29627f96c846cde80d5ef4a3a7f3bf1f 428 PIRSF PIRSF000478 4 428 2.9E-158 T 10-03-2017 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CpPa04_RS10110 29627f96c846cde80d5ef4a3a7f3bf1f 428 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 114 129 - T 10-03-2017 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CpPa04_RS10110 29627f96c846cde80d5ef4a3a7f3bf1f 428 Gene3D G3DSA:1.20.970.10 6 71 1.4E-27 T 10-03-2017 CpPa04_RS10110 29627f96c846cde80d5ef4a3a7f3bf1f 428 SMART SM00941 338 412 3.9E-32 T 10-03-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CpPa04_RS10110 29627f96c846cde80d5ef4a3a7f3bf1f 428 Gene3D G3DSA:3.90.1170.30 323 416 1.9E-33 T 10-03-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CpPa04_RS10110 29627f96c846cde80d5ef4a3a7f3bf1f 428 Gene3D G3DSA:3.40.1030.10 75 322 2.1E-109 T 10-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CpPa04_RS10110 29627f96c846cde80d5ef4a3a7f3bf1f 428 SUPERFAMILY SSF52418 75 321 9.55E-84 T 10-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CpPa04_RS10110 29627f96c846cde80d5ef4a3a7f3bf1f 428 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 338 410 3.2E-23 T 10-03-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CpPa04_RS10110 29627f96c846cde80d5ef4a3a7f3bf1f 428 Pfam PF00591 Glycosyl transferase family, a/b domain 81 291 5.0E-36 T 10-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CpPa04_RS10110 29627f96c846cde80d5ef4a3a7f3bf1f 428 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 8 408 8.7E-169 T 10-03-2017 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CpPa04_RS10110 29627f96c846cde80d5ef4a3a7f3bf1f 428 SUPERFAMILY SSF54680 325 423 3.79E-28 T 10-03-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CpPa04_RS04640 ec70859ed02c2fbac839acaf9a692e06 361 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 32 189 1.6E-55 T 10-03-2017 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 CpPa04_RS04640 ec70859ed02c2fbac839acaf9a692e06 361 SUPERFAMILY SSF48179 208 361 6.97E-52 T 10-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CpPa04_RS04640 ec70859ed02c2fbac839acaf9a692e06 361 Gene3D G3DSA:1.10.1040.10 213 356 5.3E-53 T 10-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CpPa04_RS04640 ec70859ed02c2fbac839acaf9a692e06 361 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 217 238 - T 10-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 CpPa04_RS04640 ec70859ed02c2fbac839acaf9a692e06 361 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 209 350 3.6E-48 T 10-03-2017 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 CpPa04_RS04640 ec70859ed02c2fbac839acaf9a692e06 361 SUPERFAMILY SSF51735 32 208 1.05E-53 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS04640 ec70859ed02c2fbac839acaf9a692e06 361 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 31 352 36.865 T 10-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 CpPa04_RS04640 ec70859ed02c2fbac839acaf9a692e06 361 PIRSF PIRSF000114 26 361 2.2E-103 T 10-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 CpPa04_RS04640 ec70859ed02c2fbac839acaf9a692e06 361 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 35 52 2.0E-45 T 10-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 CpPa04_RS04640 ec70859ed02c2fbac839acaf9a692e06 361 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 2.0E-45 T 10-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 CpPa04_RS04640 ec70859ed02c2fbac839acaf9a692e06 361 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 162 182 2.0E-45 T 10-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 CpPa04_RS04640 ec70859ed02c2fbac839acaf9a692e06 361 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 85 112 2.0E-45 T 10-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 CpPa04_RS04640 ec70859ed02c2fbac839acaf9a692e06 361 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 227 251 2.0E-45 T 10-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 CpPa04_RS04640 ec70859ed02c2fbac839acaf9a692e06 361 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 267 284 2.0E-45 T 10-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 CpPa04_RS04640 ec70859ed02c2fbac839acaf9a692e06 361 Gene3D G3DSA:3.40.50.720 25 212 1.4E-66 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS02430 a7f8fa74dcdf17cd8e7e4af872bdaddf 484 Pfam PF07690 Major Facilitator Superfamily 30 424 1.8E-47 T 10-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CpPa04_RS02430 a7f8fa74dcdf17cd8e7e4af872bdaddf 484 SUPERFAMILY SSF103473 14 211 1.1E-57 T 10-03-2017 IPR020846 Major facilitator superfamily domain CpPa04_RS02430 a7f8fa74dcdf17cd8e7e4af872bdaddf 484 SUPERFAMILY SSF103473 262 476 1.1E-57 T 10-03-2017 IPR020846 Major facilitator superfamily domain CpPa04_RS02430 a7f8fa74dcdf17cd8e7e4af872bdaddf 484 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 26 433 5.2E-87 T 10-03-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 CpPa04_RS02430 a7f8fa74dcdf17cd8e7e4af872bdaddf 484 PRINTS PR01036 Tetracycline resistance protein TetB signature 119 139 1.2E-7 T 10-03-2017 CpPa04_RS02430 a7f8fa74dcdf17cd8e7e4af872bdaddf 484 PRINTS PR01036 Tetracycline resistance protein TetB signature 415 434 1.2E-7 T 10-03-2017 CpPa04_RS02430 a7f8fa74dcdf17cd8e7e4af872bdaddf 484 PRINTS PR01036 Tetracycline resistance protein TetB signature 28 52 1.2E-7 T 10-03-2017 CpPa04_RS02430 a7f8fa74dcdf17cd8e7e4af872bdaddf 484 PRINTS PR01036 Tetracycline resistance protein TetB signature 149 173 1.2E-7 T 10-03-2017 CpPa04_RS02430 a7f8fa74dcdf17cd8e7e4af872bdaddf 484 Gene3D G3DSA:1.20.1250.20 279 478 3.6E-21 T 10-03-2017 CpPa04_RS02430 a7f8fa74dcdf17cd8e7e4af872bdaddf 484 Gene3D G3DSA:1.20.1250.20 28 199 3.0E-25 T 10-03-2017 CpPa04_RS00720 758bf6a3dcbb8962302ac37041424b19 462 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 16 453 3.1E-113 T 10-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CpPa04_RS00720 758bf6a3dcbb8962302ac37041424b19 462 Pfam PF02447 GntP family permease 16 453 1.8E-123 T 10-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CpPa04_RS00720 758bf6a3dcbb8962302ac37041424b19 462 PIRSF PIRSF002746 9 459 1.5E-146 T 10-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CpPa04_RS07120 c127fc15801eadf9e47f890f2b7750df 351 Pfam PF01795 MraW methylase family 18 338 2.1E-97 T 10-03-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CpPa04_RS07120 c127fc15801eadf9e47f890f2b7750df 351 Gene3D G3DSA:3.40.50.150 19 139 9.5E-36 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS07120 c127fc15801eadf9e47f890f2b7750df 351 Gene3D G3DSA:3.40.50.150 247 341 9.5E-36 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS07120 c127fc15801eadf9e47f890f2b7750df 351 SUPERFAMILY SSF81799 143 244 3.14E-33 T 10-03-2017 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CpPa04_RS07120 c127fc15801eadf9e47f890f2b7750df 351 PIRSF PIRSF004486 14 340 8.7E-89 T 10-03-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CpPa04_RS07120 c127fc15801eadf9e47f890f2b7750df 351 Gene3D G3DSA:1.10.150.170 141 246 1.5E-35 T 10-03-2017 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CpPa04_RS07120 c127fc15801eadf9e47f890f2b7750df 351 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 19 339 33.654 T 10-03-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CpPa04_RS07120 c127fc15801eadf9e47f890f2b7750df 351 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 16 337 1.6E-79 T 10-03-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CpPa04_RS07120 c127fc15801eadf9e47f890f2b7750df 351 SUPERFAMILY SSF53335 244 337 1.34E-29 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS07120 c127fc15801eadf9e47f890f2b7750df 351 SUPERFAMILY SSF53335 19 142 1.34E-29 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS02215 cc72e401fa7bf71df6c75980d26f97f1 288 Gene3D G3DSA:3.40.30.10 117 185 8.7E-6 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS02215 cc72e401fa7bf71df6c75980d26f97f1 288 PIRSF PIRSF035042 1 288 7.5E-58 T 10-03-2017 IPR010350 Thioredoxin-like ferredoxin, bacteria CpPa04_RS02215 cc72e401fa7bf71df6c75980d26f97f1 288 Pfam PF06999 Sucrase/ferredoxin-like 14 188 1.8E-17 T 10-03-2017 IPR009737 Thioredoxin-like ferredoxin CpPa04_RS06945 145675955bb888e6bd956ac4820395f9 745 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 19 105 4.1E-20 T 10-03-2017 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 CpPa04_RS06945 145675955bb888e6bd956ac4820395f9 745 Gene3D G3DSA:3.20.20.80 164 588 2.1E-124 T 10-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CpPa04_RS06945 145675955bb888e6bd956ac4820395f9 745 Gene3D G3DSA:2.60.40.10 14 163 1.9E-56 T 10-03-2017 IPR013783 Immunoglobulin-like fold CpPa04_RS06945 145675955bb888e6bd956ac4820395f9 745 SUPERFAMILY SSF51011 604 713 5.75E-24 T 10-03-2017 CpPa04_RS06945 145675955bb888e6bd956ac4820395f9 745 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 15 713 3.2E-304 T 10-03-2017 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 CpPa04_RS06945 145675955bb888e6bd956ac4820395f9 745 SMART SM00642 170 580 2.0E-7 T 10-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CpPa04_RS06945 145675955bb888e6bd956ac4820395f9 745 SUPERFAMILY SSF81296 14 159 1.37E-40 T 10-03-2017 IPR014756 Immunoglobulin E-set CpPa04_RS06945 145675955bb888e6bd956ac4820395f9 745 SUPERFAMILY SSF51445 512 588 1.14E-135 T 10-03-2017 IPR017853 Glycoside hydrolase superfamily CpPa04_RS06945 145675955bb888e6bd956ac4820395f9 745 SUPERFAMILY SSF51445 145 483 1.14E-135 T 10-03-2017 IPR017853 Glycoside hydrolase superfamily CpPa04_RS06945 145675955bb888e6bd956ac4820395f9 745 Pfam PF00128 Alpha amylase, catalytic domain 201 543 6.9E-18 T 10-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CpPa04_RS06945 145675955bb888e6bd956ac4820395f9 745 Gene3D G3DSA:2.60.40.1180 604 713 7.5E-32 T 10-03-2017 IPR013780 Glycosyl hydrolase, all-beta CpPa04_RS04865 48e8c829d7ce98cc89aaa782dbefe831 426 SMART SM00363 359 416 6.0E-4 T 10-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 CpPa04_RS04865 48e8c829d7ce98cc89aaa782dbefe831 426 Gene3D G3DSA:3.40.50.620 4 235 3.9E-91 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS04865 48e8c829d7ce98cc89aaa782dbefe831 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 219 231 1.4E-27 T 10-03-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CpPa04_RS04865 48e8c829d7ce98cc89aaa782dbefe831 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.4E-27 T 10-03-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CpPa04_RS04865 48e8c829d7ce98cc89aaa782dbefe831 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 165 180 1.4E-27 T 10-03-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CpPa04_RS04865 48e8c829d7ce98cc89aaa782dbefe831 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 186 208 1.4E-27 T 10-03-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CpPa04_RS04865 48e8c829d7ce98cc89aaa782dbefe831 426 Gene3D G3DSA:3.10.290.10 321 424 7.9E-33 T 10-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 CpPa04_RS04865 48e8c829d7ce98cc89aaa782dbefe831 426 Pfam PF01479 S4 domain 360 403 7.1E-5 T 10-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 CpPa04_RS04865 48e8c829d7ce98cc89aaa782dbefe831 426 SUPERFAMILY SSF55174 331 423 6.06E-19 T 10-03-2017 CpPa04_RS04865 48e8c829d7ce98cc89aaa782dbefe831 426 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 10-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS04865 48e8c829d7ce98cc89aaa782dbefe831 426 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 5 424 43.25 T 10-03-2017 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 CpPa04_RS04865 48e8c829d7ce98cc89aaa782dbefe831 426 Pfam PF00579 tRNA synthetases class I (W and Y) 31 327 3.5E-81 T 10-03-2017 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS04865 48e8c829d7ce98cc89aaa782dbefe831 426 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 5 423 7.6E-111 T 10-03-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CpPa04_RS04865 48e8c829d7ce98cc89aaa782dbefe831 426 Gene3D G3DSA:1.10.240.10 236 320 1.3E-37 T 10-03-2017 CpPa04_RS04865 48e8c829d7ce98cc89aaa782dbefe831 426 SUPERFAMILY SSF52374 6 327 8.7E-95 T 10-03-2017 CpPa04_RS02350 f1ed454bf5a173556b35b0a41fe83d9a 256 Pfam PF07739 TipAS antibiotic-recognition domain 131 243 4.4E-24 T 10-03-2017 IPR012925 TipAS antibiotic-recognition domain CpPa04_RS02350 f1ed454bf5a173556b35b0a41fe83d9a 256 SUPERFAMILY SSF46955 4 107 5.86E-24 T 10-03-2017 IPR009061 Putative DNA-binding domain CpPa04_RS02350 f1ed454bf5a173556b35b0a41fe83d9a 256 Gene3D G3DSA:1.10.1660.10 4 106 2.3E-25 T 10-03-2017 CpPa04_RS02350 f1ed454bf5a173556b35b0a41fe83d9a 256 SUPERFAMILY SSF89082 160 246 5.62E-18 T 10-03-2017 IPR012925 TipAS antibiotic-recognition domain CpPa04_RS02350 f1ed454bf5a173556b35b0a41fe83d9a 256 Gene3D G3DSA:1.10.490.50 160 242 1.5E-18 T 10-03-2017 IPR012925 TipAS antibiotic-recognition domain CpPa04_RS02350 f1ed454bf5a173556b35b0a41fe83d9a 256 Pfam PF13411 MerR HTH family regulatory protein 5 72 4.6E-14 T 10-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CpPa04_RS02350 f1ed454bf5a173556b35b0a41fe83d9a 256 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 29 - T 10-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CpPa04_RS02350 f1ed454bf5a173556b35b0a41fe83d9a 256 SMART SM00422 4 73 2.1E-20 T 10-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CpPa04_RS01420 ce4650dd70df551c08560d2d8ce12ddb 371 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 29 371 44.591 T 10-03-2017 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CpPa04_RS01420 ce4650dd70df551c08560d2d8ce12ddb 371 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 45 54 - T 10-03-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CpPa04_RS01420 ce4650dd70df551c08560d2d8ce12ddb 371 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 32 369 3.9E-116 T 10-03-2017 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CpPa04_RS01420 ce4650dd70df551c08560d2d8ce12ddb 371 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 29 371 6.2E-119 T 10-03-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CpPa04_RS01420 ce4650dd70df551c08560d2d8ce12ddb 371 Gene3D G3DSA:3.20.20.210 29 371 3.7E-139 T 10-03-2017 CpPa04_RS01420 ce4650dd70df551c08560d2d8ce12ddb 371 SUPERFAMILY SSF51726 27 370 8.2E-94 T 10-03-2017 CpPa04_RS01420 ce4650dd70df551c08560d2d8ce12ddb 371 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 162 178 - T 10-03-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CpPa04_RS03005 7d64640cb9636ce392640e00bfda001b 389 Gene3D G3DSA:3.40.640.10 45 277 2.4E-80 T 10-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CpPa04_RS03005 7d64640cb9636ce392640e00bfda001b 389 Gene3D G3DSA:3.90.1150.10 278 384 5.2E-17 T 10-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CpPa04_RS03005 7d64640cb9636ce392640e00bfda001b 389 SUPERFAMILY SSF53383 9 384 5.65E-96 T 10-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase CpPa04_RS03005 7d64640cb9636ce392640e00bfda001b 389 Pfam PF00155 Aminotransferase class I and II 31 384 2.7E-60 T 10-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CpPa04_RS06290 56c06e998f60f4c2139b14414d7cb001 371 SUPERFAMILY SSF51679 1 334 1.53E-72 T 10-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CpPa04_RS06290 56c06e998f60f4c2139b14414d7cb001 371 Pfam PF00296 Luciferase-like monooxygenase 1 292 2.7E-54 T 10-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CpPa04_RS06290 56c06e998f60f4c2139b14414d7cb001 371 Gene3D G3DSA:3.20.20.30 1 339 1.0E-78 T 10-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CpPa04_RS06290 56c06e998f60f4c2139b14414d7cb001 371 TIGRFAM TIGR04036 LLM_CE1758_fam: putative luciferase-like monooxygenase, FMN-dependent, CE1758 family 1 352 7.5E-202 T 10-03-2017 IPR023934 Luciferase-like monooxygenase, FMN-dependent, putative CpPa04_RS05945 1deb81194e35f0c8baaaf8e5881981b6 373 Pfam PF02355 Protein export membrane protein 130 313 2.4E-51 T 10-03-2017 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CpPa04_RS05945 1deb81194e35f0c8baaaf8e5881981b6 373 Pfam PF07549 SecD/SecF GG Motif 39 59 3.2E-5 T 10-03-2017 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CpPa04_RS05945 1deb81194e35f0c8baaaf8e5881981b6 373 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 17 315 21.589 T 10-03-2017 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CpPa04_RS05945 1deb81194e35f0c8baaaf8e5881981b6 373 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 45 304 7.7E-61 T 10-03-2017 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CpPa04_RS05945 1deb81194e35f0c8baaaf8e5881981b6 373 PRINTS PR01755 Bacterial translocase SecF protein signature 212 230 8.7E-22 T 10-03-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CpPa04_RS05945 1deb81194e35f0c8baaaf8e5881981b6 373 PRINTS PR01755 Bacterial translocase SecF protein signature 247 262 8.7E-22 T 10-03-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CpPa04_RS05945 1deb81194e35f0c8baaaf8e5881981b6 373 PRINTS PR01755 Bacterial translocase SecF protein signature 164 178 8.7E-22 T 10-03-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CpPa04_RS05945 1deb81194e35f0c8baaaf8e5881981b6 373 PRINTS PR01755 Bacterial translocase SecF protein signature 44 59 8.7E-22 T 10-03-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CpPa04_RS05945 1deb81194e35f0c8baaaf8e5881981b6 373 Gene3D G3DSA:1.20.1640.10 120 321 6.0E-15 T 10-03-2017 CpPa04_RS05945 1deb81194e35f0c8baaaf8e5881981b6 373 SUPERFAMILY SSF82866 136 314 1.31E-26 T 10-03-2017 CpPa04_RS08385 43c871a66dcb7676d2dc1a981b429a97 207 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 1 202 47.057 T 10-03-2017 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 CpPa04_RS08385 43c871a66dcb7676d2dc1a981b429a97 207 SUPERFAMILY SSF52972 1 200 4.71E-63 T 10-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like CpPa04_RS08385 43c871a66dcb7676d2dc1a981b429a97 207 Gene3D G3DSA:3.90.950.10 1 202 1.8E-76 T 10-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like CpPa04_RS08385 43c871a66dcb7676d2dc1a981b429a97 207 Pfam PF01725 Ham1 family 3 197 1.2E-52 T 10-03-2017 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 CpPa04_RS08385 43c871a66dcb7676d2dc1a981b429a97 207 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 197 8.1E-48 T 10-03-2017 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 CpPa04_RS01330 335b706b313a75c16da50f8953306701 231 SMART SM00862 153 229 7.0E-28 T 10-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CpPa04_RS01330 335b706b313a75c16da50f8953306701 231 SMART SM00448 2 112 1.4E-44 T 10-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CpPa04_RS01330 335b706b313a75c16da50f8953306701 231 Gene3D G3DSA:1.10.10.10 131 230 2.9E-35 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS01330 335b706b313a75c16da50f8953306701 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 229 2.3E-27 T 10-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CpPa04_RS01330 335b706b313a75c16da50f8953306701 231 SUPERFAMILY SSF46894 130 230 1.19E-30 T 10-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CpPa04_RS01330 335b706b313a75c16da50f8953306701 231 SUPERFAMILY SSF52172 1 119 8.97E-41 T 10-03-2017 IPR011006 CheY-like superfamily CpPa04_RS01330 335b706b313a75c16da50f8953306701 231 Gene3D G3DSA:3.40.50.2300 1 120 5.0E-40 T 10-03-2017 CpPa04_RS01330 335b706b313a75c16da50f8953306701 231 Pfam PF00072 Response regulator receiver domain 4 113 8.1E-28 T 10-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CpPa04_RS03800 5c623592cc9b856ed31fb5247ee00f89 179 Pfam PF04343 Protein of unknown function, DUF488 14 137 2.3E-28 T 10-03-2017 IPR007438 Protein of unknown function DUF488 CpPa04_RS03800 5c623592cc9b856ed31fb5247ee00f89 179 PIRSF PIRSF024492 1 179 3.6E-56 T 10-03-2017 IPR014519 Uncharacterised conserved protein UCP024492 CpPa04_RS00085 90df73d33bc27ccbff592a25243805fb 333 Gene3D G3DSA:3.40.50.2300 169 299 3.5E-21 T 10-03-2017 CpPa04_RS00085 90df73d33bc27ccbff592a25243805fb 333 SUPERFAMILY SSF53822 49 323 1.81E-51 T 10-03-2017 IPR028082 Periplasmic binding protein-like I CpPa04_RS00085 90df73d33bc27ccbff592a25243805fb 333 Gene3D G3DSA:3.40.50.2300 47 168 4.0E-29 T 10-03-2017 CpPa04_RS00085 90df73d33bc27ccbff592a25243805fb 333 Pfam PF13407 Periplasmic binding protein domain 58 296 3.0E-39 T 10-03-2017 IPR025997 Periplasmic binding protein CpPa04_RS05230 ebeba44b7340581269f7b88be5625fea 246 SUPERFAMILY SSF51735 5 244 4.38E-34 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS05230 ebeba44b7340581269f7b88be5625fea 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 10-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CpPa04_RS05230 ebeba44b7340581269f7b88be5625fea 246 Pfam PF00106 short chain dehydrogenase 6 190 2.0E-19 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS05230 ebeba44b7340581269f7b88be5625fea 246 Gene3D G3DSA:3.40.50.720 5 214 3.4E-29 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS05230 ebeba44b7340581269f7b88be5625fea 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.2E-7 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS05230 ebeba44b7340581269f7b88be5625fea 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.2E-7 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS05230 ebeba44b7340581269f7b88be5625fea 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.2E-7 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS05230 ebeba44b7340581269f7b88be5625fea 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.2E-7 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS09495 c417809135bb4bfd32445d5b71b89b23 278 Pfam PF00581 Rhodanese-like domain 163 266 4.2E-14 T 10-03-2017 IPR001763 Rhodanese-like domain CpPa04_RS09495 c417809135bb4bfd32445d5b71b89b23 278 Pfam PF00581 Rhodanese-like domain 7 127 2.2E-12 T 10-03-2017 IPR001763 Rhodanese-like domain CpPa04_RS09495 c417809135bb4bfd32445d5b71b89b23 278 SUPERFAMILY SSF52821 3 139 2.88E-28 T 10-03-2017 IPR001763 Rhodanese-like domain CpPa04_RS09495 c417809135bb4bfd32445d5b71b89b23 278 Gene3D G3DSA:3.40.250.10 2 141 2.2E-33 T 10-03-2017 IPR001763 Rhodanese-like domain CpPa04_RS09495 c417809135bb4bfd32445d5b71b89b23 278 Gene3D G3DSA:3.40.250.10 152 277 9.1E-33 T 10-03-2017 IPR001763 Rhodanese-like domain CpPa04_RS09495 c417809135bb4bfd32445d5b71b89b23 278 SUPERFAMILY SSF52821 160 275 2.36E-29 T 10-03-2017 IPR001763 Rhodanese-like domain CpPa04_RS09495 c417809135bb4bfd32445d5b71b89b23 278 SMART SM00450 145 270 1.0E-13 T 10-03-2017 IPR001763 Rhodanese-like domain CpPa04_RS09495 c417809135bb4bfd32445d5b71b89b23 278 SMART SM00450 5 131 1.9E-7 T 10-03-2017 IPR001763 Rhodanese-like domain CpPa04_RS02605 c44cc307f1ff94c1c0c4309a7fd8f5fd 479 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 237 399 4.8E-74 T 10-03-2017 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CpPa04_RS02605 c44cc307f1ff94c1c0c4309a7fd8f5fd 479 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 1 471 48.843 T 10-03-2017 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CpPa04_RS02605 c44cc307f1ff94c1c0c4309a7fd8f5fd 479 Gene3D G3DSA:3.40.50.1480 400 479 7.9E-139 T 10-03-2017 CpPa04_RS02605 c44cc307f1ff94c1c0c4309a7fd8f5fd 479 Gene3D G3DSA:3.40.50.1480 5 238 7.9E-139 T 10-03-2017 CpPa04_RS02605 c44cc307f1ff94c1c0c4309a7fd8f5fd 479 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 77 91 - T 10-03-2017 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CpPa04_RS02605 c44cc307f1ff94c1c0c4309a7fd8f5fd 479 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 259 275 - T 10-03-2017 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CpPa04_RS02605 c44cc307f1ff94c1c0c4309a7fd8f5fd 479 SMART SM00996 5 478 1.2E-299 T 10-03-2017 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CpPa04_RS02605 c44cc307f1ff94c1c0c4309a7fd8f5fd 479 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 5 478 4.2E-141 T 10-03-2017 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CpPa04_RS02605 c44cc307f1ff94c1c0c4309a7fd8f5fd 479 SUPERFAMILY SSF51735 237 399 4.3E-69 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS02605 c44cc307f1ff94c1c0c4309a7fd8f5fd 479 Gene3D G3DSA:3.40.50.720 239 398 8.9E-49 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS02605 c44cc307f1ff94c1c0c4309a7fd8f5fd 479 SUPERFAMILY SSF52283 3 151 6.23E-110 T 10-03-2017 CpPa04_RS02605 c44cc307f1ff94c1c0c4309a7fd8f5fd 479 SUPERFAMILY SSF52283 400 479 6.23E-110 T 10-03-2017 CpPa04_RS02605 c44cc307f1ff94c1c0c4309a7fd8f5fd 479 SUPERFAMILY SSF52283 189 236 6.23E-110 T 10-03-2017 CpPa04_RS02605 c44cc307f1ff94c1c0c4309a7fd8f5fd 479 SMART SM00997 237 399 2.0E-100 T 10-03-2017 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CpPa04_RS02605 c44cc307f1ff94c1c0c4309a7fd8f5fd 479 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 6 471 3.3E-189 T 10-03-2017 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CpPa04_RS02605 c44cc307f1ff94c1c0c4309a7fd8f5fd 479 PIRSF PIRSF001109 1 479 3.6E-187 T 10-03-2017 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CpPa04_RS04555 963c57c7ccf85e4c9e12eb2656c42581 637 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 474 617 8.2E-43 T 10-03-2017 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding CpPa04_RS04555 963c57c7ccf85e4c9e12eb2656c42581 637 SUPERFAMILY SSF51206 3 128 4.71E-20 T 10-03-2017 IPR018490 Cyclic nucleotide-binding-like CpPa04_RS04555 963c57c7ccf85e4c9e12eb2656c42581 637 Pfam PF00571 CBS domain 217 274 1.4E-9 T 10-03-2017 IPR000644 CBS domain CpPa04_RS04555 963c57c7ccf85e4c9e12eb2656c42581 637 Pfam PF00571 CBS domain 154 206 7.6E-12 T 10-03-2017 IPR000644 CBS domain CpPa04_RS04555 963c57c7ccf85e4c9e12eb2656c42581 637 Pfam PF03445 Putative nucleotidyltransferase DUF294 302 437 2.3E-41 T 10-03-2017 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 CpPa04_RS04555 963c57c7ccf85e4c9e12eb2656c42581 637 SUPERFAMILY SSF81301 263 397 1.83E-8 T 10-03-2017 CpPa04_RS04555 963c57c7ccf85e4c9e12eb2656c42581 637 Pfam PF00027 Cyclic nucleotide-binding domain 36 117 1.0E-12 T 10-03-2017 IPR000595 Cyclic nucleotide-binding domain CpPa04_RS04555 963c57c7ccf85e4c9e12eb2656c42581 637 SMART SM00116 224 275 7.2E-6 T 10-03-2017 IPR000644 CBS domain CpPa04_RS04555 963c57c7ccf85e4c9e12eb2656c42581 637 SMART SM00116 160 207 0.0056 T 10-03-2017 IPR000644 CBS domain CpPa04_RS04555 963c57c7ccf85e4c9e12eb2656c42581 637 SMART SM00100 17 134 1.7E-5 T 10-03-2017 IPR000595 Cyclic nucleotide-binding domain CpPa04_RS04555 963c57c7ccf85e4c9e12eb2656c42581 637 Gene3D G3DSA:3.10.580.10 149 272 2.1E-30 T 10-03-2017 CpPa04_RS04555 963c57c7ccf85e4c9e12eb2656c42581 637 SUPERFAMILY SSF54631 153 276 1.89E-29 T 10-03-2017 CpPa04_RS04555 963c57c7ccf85e4c9e12eb2656c42581 637 Gene3D G3DSA:2.60.120.10 4 142 1.1E-17 T 10-03-2017 IPR014710 RmlC-like jelly roll fold CpPa04_RS10410 2202d9237740799b2cf4141f6ae1e643 953 PRINTS PR00985 Leucyl-tRNA synthetase signature 592 610 4.1E-46 T 10-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CpPa04_RS10410 2202d9237740799b2cf4141f6ae1e643 953 PRINTS PR00985 Leucyl-tRNA synthetase signature 673 683 4.1E-46 T 10-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CpPa04_RS10410 2202d9237740799b2cf4141f6ae1e643 953 PRINTS PR00985 Leucyl-tRNA synthetase signature 262 275 4.1E-46 T 10-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CpPa04_RS10410 2202d9237740799b2cf4141f6ae1e643 953 PRINTS PR00985 Leucyl-tRNA synthetase signature 291 310 4.1E-46 T 10-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CpPa04_RS10410 2202d9237740799b2cf4141f6ae1e643 953 PRINTS PR00985 Leucyl-tRNA synthetase signature 640 662 4.1E-46 T 10-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CpPa04_RS10410 2202d9237740799b2cf4141f6ae1e643 953 PRINTS PR00985 Leucyl-tRNA synthetase signature 151 168 4.1E-46 T 10-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CpPa04_RS10410 2202d9237740799b2cf4141f6ae1e643 953 SUPERFAMILY SSF50677 299 511 6.28E-42 T 10-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CpPa04_RS10410 2202d9237740799b2cf4141f6ae1e643 953 SUPERFAMILY SSF47323 766 952 3.18E-31 T 10-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS10410 2202d9237740799b2cf4141f6ae1e643 953 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 17 952 21.145 T 10-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CpPa04_RS10410 2202d9237740799b2cf4141f6ae1e643 953 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 297 495 7.1E-55 T 10-03-2017 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 CpPa04_RS10410 2202d9237740799b2cf4141f6ae1e643 953 Pfam PF08264 Anticodon-binding domain of tRNA 801 914 2.8E-14 T 10-03-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CpPa04_RS10410 2202d9237740799b2cf4141f6ae1e643 953 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 67 77 - T 10-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS10410 2202d9237740799b2cf4141f6ae1e643 953 Pfam PF09334 tRNA synthetases class I (M) 63 167 2.4E-13 T 10-03-2017 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS10410 2202d9237740799b2cf4141f6ae1e643 953 SUPERFAMILY SSF52374 23 171 1.1E-106 T 10-03-2017 CpPa04_RS10410 2202d9237740799b2cf4141f6ae1e643 953 SUPERFAMILY SSF52374 224 302 1.1E-106 T 10-03-2017 CpPa04_RS10410 2202d9237740799b2cf4141f6ae1e643 953 SUPERFAMILY SSF52374 508 771 1.1E-106 T 10-03-2017 CpPa04_RS10410 2202d9237740799b2cf4141f6ae1e643 953 Gene3D G3DSA:1.10.730.10 752 888 2.6E-33 T 10-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS10410 2202d9237740799b2cf4141f6ae1e643 953 Gene3D G3DSA:3.90.740.10 299 516 3.2E-50 T 10-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CpPa04_RS10410 2202d9237740799b2cf4141f6ae1e643 953 Gene3D G3DSA:3.40.50.620 22 170 3.8E-131 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS10410 2202d9237740799b2cf4141f6ae1e643 953 Gene3D G3DSA:3.40.50.620 517 689 3.8E-131 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS10410 2202d9237740799b2cf4141f6ae1e643 953 Gene3D G3DSA:3.40.50.620 223 298 3.8E-131 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS10410 2202d9237740799b2cf4141f6ae1e643 953 Gene3D G3DSA:3.40.50.620 722 751 3.8E-131 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS10410 2202d9237740799b2cf4141f6ae1e643 953 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 223 953 4.5E-219 T 10-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CpPa04_RS04525 122ff499243ee986456b2c7db9baf7a8 337 Gene3D G3DSA:1.10.1040.10 41 327 1.8E-109 T 10-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CpPa04_RS04525 122ff499243ee986456b2c7db9baf7a8 337 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 3 330 44.134 T 10-03-2017 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CpPa04_RS04525 122ff499243ee986456b2c7db9baf7a8 337 SUPERFAMILY SSF51735 4 184 8.35E-71 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS04525 122ff499243ee986456b2c7db9baf7a8 337 SUPERFAMILY SSF48179 185 330 4.59E-66 T 10-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CpPa04_RS04525 122ff499243ee986456b2c7db9baf7a8 337 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 16 179 7.7E-73 T 10-03-2017 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CpPa04_RS04525 122ff499243ee986456b2c7db9baf7a8 337 PIRSF PIRSF000116 7 326 7.6E-53 T 10-03-2017 IPR014359 Ketol-acid reductoisomerase, bacteria GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CpPa04_RS04525 122ff499243ee986456b2c7db9baf7a8 337 Gene3D G3DSA:3.50.50.60 7 40 5.7E-4 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS04525 122ff499243ee986456b2c7db9baf7a8 337 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 185 328 7.8E-62 T 10-03-2017 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CpPa04_RS04525 122ff499243ee986456b2c7db9baf7a8 337 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 16 330 1.0E-123 T 10-03-2017 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CpPa04_RS03265 373aac71939ac8e164907d75d206b077 846 Pfam PF00580 UvrD/REP helicase N-terminal domain 66 335 1.9E-76 T 10-03-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CpPa04_RS03265 373aac71939ac8e164907d75d206b077 846 SUPERFAMILY SSF52540 58 737 3.41E-173 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03265 373aac71939ac8e164907d75d206b077 846 Pfam PF13361 UvrD-like helicase C-terminal domain 342 708 1.2E-73 T 10-03-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CpPa04_RS03265 373aac71939ac8e164907d75d206b077 846 Gene3D G3DSA:3.40.50.300 249 349 1.0E-70 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03265 373aac71939ac8e164907d75d206b077 846 Gene3D G3DSA:3.40.50.300 61 166 1.0E-70 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03265 373aac71939ac8e164907d75d206b077 846 Gene3D G3DSA:3.40.50.300 350 451 5.4E-71 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03265 373aac71939ac8e164907d75d206b077 846 Gene3D G3DSA:3.40.50.300 647 738 5.4E-71 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03265 373aac71939ac8e164907d75d206b077 846 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 62 836 8.3E-278 T 10-03-2017 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 CpPa04_RS03265 373aac71939ac8e164907d75d206b077 846 Gene3D G3DSA:1.10.486.10 452 635 1.3E-46 T 10-03-2017 CpPa04_RS03265 373aac71939ac8e164907d75d206b077 846 Gene3D G3DSA:1.10.10.160 171 248 1.3E-24 T 10-03-2017 IPR013986 DExx box DNA helicase domain CpPa04_RS07710 bfe564b639541f441a426b5d037a47d7 133 Pfam PF01022 Bacterial regulatory protein, arsR family 50 96 3.1E-14 T 10-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CpPa04_RS07710 bfe564b639541f441a426b5d037a47d7 133 SUPERFAMILY SSF46785 31 120 4.24E-21 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS07710 bfe564b639541f441a426b5d037a47d7 133 Gene3D G3DSA:1.10.10.10 31 124 2.7E-23 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS07710 bfe564b639541f441a426b5d037a47d7 133 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 77 92 3.6E-12 T 10-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CpPa04_RS07710 bfe564b639541f441a426b5d037a47d7 133 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 92 107 3.6E-12 T 10-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CpPa04_RS07710 bfe564b639541f441a426b5d037a47d7 133 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 3.6E-12 T 10-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CpPa04_RS07710 bfe564b639541f441a426b5d037a47d7 133 SMART SM00418 43 121 8.5E-17 T 10-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CpPa04_RS10485 6847b3ab461f4e77445b29e77d62a73d 677 SMART SM00382 374 572 5.4E-15 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS10485 6847b3ab461f4e77445b29e77d62a73d 677 SUPERFAMILY SSF161098 81 273 4.06E-17 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS10485 6847b3ab461f4e77445b29e77d62a73d 677 Gene3D G3DSA:3.40.50.300 344 588 7.9E-73 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS10485 6847b3ab461f4e77445b29e77d62a73d 677 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 276 2.5E-19 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS10485 6847b3ab461f4e77445b29e77d62a73d 677 SUPERFAMILY SSF52540 345 585 5.33E-63 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS10485 6847b3ab461f4e77445b29e77d62a73d 677 Gene3D G3DSA:1.10.3720.10 78 281 1.6E-16 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS10485 6847b3ab461f4e77445b29e77d62a73d 677 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 564 647 1.0E-11 T 10-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CpPa04_RS10485 6847b3ab461f4e77445b29e77d62a73d 677 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS10485 6847b3ab461f4e77445b29e77d62a73d 677 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 566 622 6.1E-10 T 10-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CpPa04_RS10485 6847b3ab461f4e77445b29e77d62a73d 677 Pfam PF00005 ABC transporter 366 514 2.3E-28 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS05250 db2f571bec705f918c1d37241a24d2b0 92 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 84 21.22 T 10-03-2017 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CpPa04_RS05250 db2f571bec705f918c1d37241a24d2b0 92 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 2.0E-20 T 10-03-2017 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CpPa04_RS05250 db2f571bec705f918c1d37241a24d2b0 92 Pfam PF02416 mttA/Hcf106 family 3 54 4.4E-22 T 10-03-2017 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CpPa04_RS08620 d668fc1be7605a6b69b60b0a457b2445 279 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 248 260 1.6E-9 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS08620 d668fc1be7605a6b69b60b0a457b2445 279 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 218 232 1.6E-9 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS08620 d668fc1be7605a6b69b60b0a457b2445 279 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 232 248 1.6E-9 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS08620 d668fc1be7605a6b69b60b0a457b2445 279 SUPERFAMILY SSF55781 10 144 6.32E-15 T 10-03-2017 IPR029016 GAF domain-like CpPa04_RS08620 d668fc1be7605a6b69b60b0a457b2445 279 Gene3D G3DSA:1.10.10.10 215 276 1.6E-18 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS08620 d668fc1be7605a6b69b60b0a457b2445 279 Gene3D G3DSA:3.30.450.40 8 141 3.1E-12 T 10-03-2017 IPR029016 GAF domain-like CpPa04_RS08620 d668fc1be7605a6b69b60b0a457b2445 279 SUPERFAMILY SSF46894 209 277 6.46E-18 T 10-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CpPa04_RS08620 d668fc1be7605a6b69b60b0a457b2445 279 SMART SM00065 8 156 0.0016 T 10-03-2017 IPR003018 GAF domain GO:0005515 CpPa04_RS08620 d668fc1be7605a6b69b60b0a457b2445 279 Pfam PF13185 GAF domain 10 140 8.3E-8 T 10-03-2017 IPR003018 GAF domain GO:0005515 CpPa04_RS08620 d668fc1be7605a6b69b60b0a457b2445 279 SMART SM00421 215 272 6.4E-19 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS08620 d668fc1be7605a6b69b60b0a457b2445 279 Pfam PF00196 Bacterial regulatory proteins, luxR family 217 271 1.4E-14 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS06735 3c5a0741c588b0ba4321d5b2d7b4ee70 193 Gene3D G3DSA:2.60.120.10 96 191 5.4E-19 T 10-03-2017 IPR014710 RmlC-like jelly roll fold CpPa04_RS06735 3c5a0741c588b0ba4321d5b2d7b4ee70 193 SUPERFAMILY SSF51182 107 187 1.91E-12 T 10-03-2017 IPR011051 RmlC-like cupin domain CpPa04_RS05070 412c15545f971cfd59263c6e69c62ced 765 TIGRFAM TIGR04221 SecA2_Mycobac: accessory Sec system translocase SecA2 4 765 0.0 T 10-03-2017 IPR026389 Protein translocase subunit SecA, Actinobacteria-type CpPa04_RS05070 412c15545f971cfd59263c6e69c62ced 765 ProSitePatterns PS01312 SecA family signature. 478 493 - T 10-03-2017 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 CpPa04_RS05070 412c15545f971cfd59263c6e69c62ced 765 Pfam PF07516 SecA Wing and Scaffold domain 642 719 3.8E-14 T 10-03-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CpPa04_RS05070 412c15545f971cfd59263c6e69c62ced 765 Pfam PF01043 SecA preprotein cross-linking domain 234 336 1.1E-22 T 10-03-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CpPa04_RS05070 412c15545f971cfd59263c6e69c62ced 765 SUPERFAMILY SSF81886 572 730 1.96E-31 T 10-03-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CpPa04_RS05070 412c15545f971cfd59263c6e69c62ced 765 SUPERFAMILY SSF81767 233 345 1.23E-30 T 10-03-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CpPa04_RS05070 412c15545f971cfd59263c6e69c62ced 765 SUPERFAMILY SSF52540 395 551 1.08E-40 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05070 412c15545f971cfd59263c6e69c62ced 765 SUPERFAMILY SSF52540 346 392 6.88E-50 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05070 412c15545f971cfd59263c6e69c62ced 765 SUPERFAMILY SSF52540 5 224 6.88E-50 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05070 412c15545f971cfd59263c6e69c62ced 765 SMART SM00958 223 336 1.2E-29 T 10-03-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CpPa04_RS05070 412c15545f971cfd59263c6e69c62ced 765 Hamap MF_01382 Protein translocase subunit SecA [secA]. 6 722 15.583 T 10-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CpPa04_RS05070 412c15545f971cfd59263c6e69c62ced 765 PRINTS PR00906 SecA protein signature 59 83 6.5E-31 T 10-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CpPa04_RS05070 412c15545f971cfd59263c6e69c62ced 765 PRINTS PR00906 SecA protein signature 391 404 6.5E-31 T 10-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CpPa04_RS05070 412c15545f971cfd59263c6e69c62ced 765 PRINTS PR00906 SecA protein signature 113 123 6.5E-31 T 10-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CpPa04_RS05070 412c15545f971cfd59263c6e69c62ced 765 PRINTS PR00906 SecA protein signature 354 371 6.5E-31 T 10-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CpPa04_RS05070 412c15545f971cfd59263c6e69c62ced 765 PRINTS PR00906 SecA protein signature 97 111 6.5E-31 T 10-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CpPa04_RS05070 412c15545f971cfd59263c6e69c62ced 765 PRINTS PR00906 SecA protein signature 166 186 6.5E-31 T 10-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CpPa04_RS05070 412c15545f971cfd59263c6e69c62ced 765 PRINTS PR00906 SecA protein signature 317 339 6.5E-31 T 10-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CpPa04_RS05070 412c15545f971cfd59263c6e69c62ced 765 Gene3D G3DSA:3.90.1440.10 233 345 3.9E-33 T 10-03-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CpPa04_RS05070 412c15545f971cfd59263c6e69c62ced 765 Gene3D G3DSA:3.40.50.300 5 224 3.7E-73 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05070 412c15545f971cfd59263c6e69c62ced 765 Gene3D G3DSA:3.40.50.300 347 393 3.7E-73 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05070 412c15545f971cfd59263c6e69c62ced 765 Gene3D G3DSA:3.40.50.300 395 555 2.2E-59 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05070 412c15545f971cfd59263c6e69c62ced 765 Pfam PF07517 SecA DEAD-like domain 9 379 1.4E-77 T 10-03-2017 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CpPa04_RS05070 412c15545f971cfd59263c6e69c62ced 765 SMART SM00957 7 380 3.2E-135 T 10-03-2017 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CpPa04_RS00680 80c4f20fe28f74b157888c7e20ea5ede 188 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 3 182 8.7E-53 T 10-03-2017 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 CpPa04_RS00680 80c4f20fe28f74b157888c7e20ea5ede 188 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 3 185 32.407 T 10-03-2017 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 CpPa04_RS00680 80c4f20fe28f74b157888c7e20ea5ede 188 Gene3D G3DSA:3.40.50.880 1 186 8.7E-57 T 10-03-2017 IPR029062 Class I glutamine amidotransferase-like CpPa04_RS00680 80c4f20fe28f74b157888c7e20ea5ede 188 SUPERFAMILY SSF52317 2 185 5.33E-39 T 10-03-2017 IPR029062 Class I glutamine amidotransferase-like CpPa04_RS00680 80c4f20fe28f74b157888c7e20ea5ede 188 PIRSF PIRSF005639 1 188 2.4E-56 T 10-03-2017 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 CpPa04_RS00680 80c4f20fe28f74b157888c7e20ea5ede 188 Pfam PF01174 SNO glutamine amidotransferase family 5 185 3.4E-43 T 10-03-2017 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 CpPa04_RS00680 80c4f20fe28f74b157888c7e20ea5ede 188 ProSitePatterns PS01236 PdxT/SNO family family signature. 40 50 - T 10-03-2017 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 CpPa04_RS03655 88bb5332e48a7b0e1f4b6b2630dad74d 342 SMART SM00342 139 221 3.1E-15 T 10-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CpPa04_RS03655 88bb5332e48a7b0e1f4b6b2630dad74d 342 Gene3D G3DSA:1.10.10.60 177 220 2.7E-9 T 10-03-2017 IPR009057 Homeodomain-like GO:0003677 CpPa04_RS03655 88bb5332e48a7b0e1f4b6b2630dad74d 342 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 176 217 - T 10-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CpPa04_RS03655 88bb5332e48a7b0e1f4b6b2630dad74d 342 Pfam PF12833 Helix-turn-helix domain 146 220 6.3E-18 T 10-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CpPa04_RS03655 88bb5332e48a7b0e1f4b6b2630dad74d 342 SUPERFAMILY SSF46689 176 222 1.03E-7 T 10-03-2017 IPR009057 Homeodomain-like GO:0003677 CpPa04_RS03655 88bb5332e48a7b0e1f4b6b2630dad74d 342 SUPERFAMILY SSF46689 127 172 7.97E-5 T 10-03-2017 IPR009057 Homeodomain-like GO:0003677 CpPa04_RS03655 88bb5332e48a7b0e1f4b6b2630dad74d 342 Gene3D G3DSA:1.10.10.60 122 176 8.6E-7 T 10-03-2017 IPR009057 Homeodomain-like GO:0003677 CpPa04_RS03325 72285de7cd66b09e51cd4d4099bd1e29 82 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 11 82 19.385 T 10-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS03325 72285de7cd66b09e51cd4d4099bd1e29 82 Gene3D G3DSA:4.10.640.10 18 81 2.4E-29 T 10-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS03325 72285de7cd66b09e51cd4d4099bd1e29 82 PRINTS PR00974 Ribosomal protein S18 family signature 37 47 6.4E-16 T 10-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS03325 72285de7cd66b09e51cd4d4099bd1e29 82 PRINTS PR00974 Ribosomal protein S18 family signature 69 79 6.4E-16 T 10-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS03325 72285de7cd66b09e51cd4d4099bd1e29 82 PRINTS PR00974 Ribosomal protein S18 family signature 55 69 6.4E-16 T 10-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS03325 72285de7cd66b09e51cd4d4099bd1e29 82 PRINTS PR00974 Ribosomal protein S18 family signature 47 54 6.4E-16 T 10-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS03325 72285de7cd66b09e51cd4d4099bd1e29 82 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 30 81 3.0E-24 T 10-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS03325 72285de7cd66b09e51cd4d4099bd1e29 82 Pfam PF01084 Ribosomal protein S18 27 77 1.2E-23 T 10-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS03325 72285de7cd66b09e51cd4d4099bd1e29 82 ProSitePatterns PS00057 Ribosomal protein S18 signature. 30 53 - T 10-03-2017 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS03325 72285de7cd66b09e51cd4d4099bd1e29 82 SUPERFAMILY SSF46911 9 81 7.72E-25 T 10-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS03325 72285de7cd66b09e51cd4d4099bd1e29 82 TIGRFAM TIGR00165 S18: ribosomal protein bS18 16 81 6.0E-24 T 10-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS04520 3621ad3bfddb1bf9725738b7de1b6c34 172 SUPERFAMILY SSF55021 86 168 5.49E-25 T 10-03-2017 CpPa04_RS04520 3621ad3bfddb1bf9725738b7de1b6c34 172 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 8 164 4.3E-55 T 10-03-2017 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CpPa04_RS04520 3621ad3bfddb1bf9725738b7de1b6c34 172 Gene3D G3DSA:3.30.70.260 8 84 1.6E-24 T 10-03-2017 CpPa04_RS04520 3621ad3bfddb1bf9725738b7de1b6c34 172 SUPERFAMILY SSF55021 8 82 5.56E-15 T 10-03-2017 CpPa04_RS04520 3621ad3bfddb1bf9725738b7de1b6c34 172 Pfam PF10369 Small subunit of acetolactate synthase 90 163 1.0E-27 T 10-03-2017 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CpPa04_RS04520 3621ad3bfddb1bf9725738b7de1b6c34 172 Pfam PF01842 ACT domain 9 74 3.2E-10 T 10-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 CpPa04_RS04520 3621ad3bfddb1bf9725738b7de1b6c34 172 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 8 82 3.0E-28 T 10-03-2017 CpPa04_RS04520 3621ad3bfddb1bf9725738b7de1b6c34 172 Gene3D G3DSA:3.30.70.1150 90 168 1.8E-29 T 10-03-2017 CpPa04_RS06520 0fd945e348b6e6cf0ccc75ed3d3cf321 585 PRINTS PR01046 Prolyl-tRNA synthetase signature 106 117 2.8E-14 T 10-03-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CpPa04_RS06520 0fd945e348b6e6cf0ccc75ed3d3cf321 585 PRINTS PR01046 Prolyl-tRNA synthetase signature 146 157 2.8E-14 T 10-03-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CpPa04_RS06520 0fd945e348b6e6cf0ccc75ed3d3cf321 585 PRINTS PR01046 Prolyl-tRNA synthetase signature 70 88 2.8E-14 T 10-03-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CpPa04_RS06520 0fd945e348b6e6cf0ccc75ed3d3cf321 585 PRINTS PR01046 Prolyl-tRNA synthetase signature 136 144 2.8E-14 T 10-03-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CpPa04_RS06520 0fd945e348b6e6cf0ccc75ed3d3cf321 585 SUPERFAMILY SSF55826 283 428 1.09E-10 T 10-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CpPa04_RS06520 0fd945e348b6e6cf0ccc75ed3d3cf321 585 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 4 570 1.8E-169 T 10-03-2017 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CpPa04_RS06520 0fd945e348b6e6cf0ccc75ed3d3cf321 585 Hamap MF_01569 Proline--tRNA ligase [proS]. 3 584 36.581 T 10-03-2017 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CpPa04_RS06520 0fd945e348b6e6cf0ccc75ed3d3cf321 585 SUPERFAMILY SSF52954 479 583 6.05E-25 T 10-03-2017 IPR004154 Anticodon-binding CpPa04_RS06520 0fd945e348b6e6cf0ccc75ed3d3cf321 585 Pfam PF03129 Anticodon binding domain 493 580 1.4E-12 T 10-03-2017 IPR004154 Anticodon-binding CpPa04_RS06520 0fd945e348b6e6cf0ccc75ed3d3cf321 585 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 96 474 5.0E-41 T 10-03-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS06520 0fd945e348b6e6cf0ccc75ed3d3cf321 585 SUPERFAMILY SSF55681 423 494 3.61E-90 T 10-03-2017 CpPa04_RS06520 0fd945e348b6e6cf0ccc75ed3d3cf321 585 SUPERFAMILY SSF55681 12 239 3.61E-90 T 10-03-2017 CpPa04_RS06520 0fd945e348b6e6cf0ccc75ed3d3cf321 585 Gene3D G3DSA:3.90.960.10 282 395 2.0E-10 T 10-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CpPa04_RS06520 0fd945e348b6e6cf0ccc75ed3d3cf321 585 Gene3D G3DSA:3.40.50.800 488 582 3.0E-22 T 10-03-2017 IPR004154 Anticodon-binding CpPa04_RS06520 0fd945e348b6e6cf0ccc75ed3d3cf321 585 Gene3D G3DSA:3.30.930.10 12 236 3.0E-94 T 10-03-2017 CpPa04_RS06520 0fd945e348b6e6cf0ccc75ed3d3cf321 585 Gene3D G3DSA:3.30.930.10 405 487 3.0E-94 T 10-03-2017 CpPa04_RS06520 0fd945e348b6e6cf0ccc75ed3d3cf321 585 Pfam PF04073 Aminoacyl-tRNA editing domain 272 394 1.6E-19 T 10-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CpPa04_RS09480 d893459b92c8f20b523f5e70880d9de3 223 SUPERFAMILY SSF75217 57 217 4.97E-35 T 10-03-2017 IPR029028 Alpha/beta knot methyltransferases CpPa04_RS09480 d893459b92c8f20b523f5e70880d9de3 223 Pfam PF00588 SpoU rRNA Methylase family 74 210 2.9E-21 T 10-03-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CpPa04_RS09480 d893459b92c8f20b523f5e70880d9de3 223 Gene3D G3DSA:3.40.1280.10 55 217 5.3E-38 T 10-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CpPa04_RS08830 3cb188ea522a8123efef63782af6950a 297 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 9 289 3.8E-74 T 10-03-2017 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 CpPa04_RS08830 3cb188ea522a8123efef63782af6950a 297 ProSitePatterns PS01058 SAICAR synthetase signature 2. 194 202 - T 10-03-2017 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CpPa04_RS08830 3cb188ea522a8123efef63782af6950a 297 Gene3D G3DSA:3.30.470.20 107 238 1.8E-57 T 10-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CpPa04_RS08830 3cb188ea522a8123efef63782af6950a 297 SUPERFAMILY SSF56104 5 289 5.23E-98 T 10-03-2017 CpPa04_RS08830 3cb188ea522a8123efef63782af6950a 297 Pfam PF01259 SAICAR synthetase 10 257 3.0E-100 T 10-03-2017 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CpPa04_RS08830 3cb188ea522a8123efef63782af6950a 297 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 8 286 25.612 T 10-03-2017 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CpPa04_RS08830 3cb188ea522a8123efef63782af6950a 297 Gene3D G3DSA:3.30.200.20 3 106 8.0E-40 T 10-03-2017 CpPa04_RS08830 3cb188ea522a8123efef63782af6950a 297 ProSitePatterns PS01057 SAICAR synthetase signature 1. 95 109 - T 10-03-2017 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CpPa04_RS02155 b4ef6fdf0f40843ca1900f780aa43b51 196 Pfam PF08281 Sigma-70, region 4 137 188 6.7E-9 T 10-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS02155 b4ef6fdf0f40843ca1900f780aa43b51 196 SUPERFAMILY SSF88659 122 194 1.59E-13 T 10-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS02155 b4ef6fdf0f40843ca1900f780aa43b51 196 SUPERFAMILY SSF88946 14 125 6.8E-16 T 10-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS02155 b4ef6fdf0f40843ca1900f780aa43b51 196 Gene3D G3DSA:1.10.10.10 137 195 5.9E-14 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS02155 b4ef6fdf0f40843ca1900f780aa43b51 196 Pfam PF04542 Sigma-70 region 2 40 106 1.6E-8 T 10-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS02155 b4ef6fdf0f40843ca1900f780aa43b51 196 Gene3D G3DSA:1.10.1740.10 15 126 4.1E-15 T 10-03-2017 CpPa04_RS02155 b4ef6fdf0f40843ca1900f780aa43b51 196 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 192 1.3E-22 T 10-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06215 19ed714aa901d1d7c2be1279eb89a509 174 Pfam PF02627 Carboxymuconolactone decarboxylase family 99 168 2.9E-13 T 10-03-2017 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CpPa04_RS06215 19ed714aa901d1d7c2be1279eb89a509 174 SUPERFAMILY SSF69118 3 168 2.88E-44 T 10-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 CpPa04_RS06215 19ed714aa901d1d7c2be1279eb89a509 174 Gene3D G3DSA:1.20.1290.10 1 169 2.6E-53 T 10-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 CpPa04_RS06215 19ed714aa901d1d7c2be1279eb89a509 174 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 111 158 2.2E-15 T 10-03-2017 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CpPa04_RS06215 19ed714aa901d1d7c2be1279eb89a509 174 Hamap MF_01676 Alkyl hydroperoxide reductase AhpD [ahpD]. 1 174 72.043 T 10-03-2017 IPR004674 Alkylhydroperoxidase AhpD GO:0006979|GO:0032843|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CpPa04_RS06215 19ed714aa901d1d7c2be1279eb89a509 174 TIGRFAM TIGR00777 ahpD: alkylhydroperoxidase, AhpD family 2 173 9.7E-63 T 10-03-2017 IPR004674 Alkylhydroperoxidase AhpD GO:0006979|GO:0032843|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CpPa04_RS01820 f5e9586d51881b2e246d6094b3b05f05 76 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 5 64 17.692 T 10-03-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01820 f5e9586d51881b2e246d6094b3b05f05 76 Pfam PF00831 Ribosomal L29 protein 9 64 5.8E-25 T 10-03-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01820 f5e9586d51881b2e246d6094b3b05f05 76 TIGRFAM TIGR00012 L29: ribosomal protein uL29 9 64 1.1E-21 T 10-03-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01820 f5e9586d51881b2e246d6094b3b05f05 76 ProSitePatterns PS00579 Ribosomal protein L29 signature. 43 57 - T 10-03-2017 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01820 f5e9586d51881b2e246d6094b3b05f05 76 SUPERFAMILY SSF46561 7 67 8.11E-23 T 10-03-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01820 f5e9586d51881b2e246d6094b3b05f05 76 Gene3D G3DSA:1.10.287.310 7 68 9.9E-30 T 10-03-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 222 735 1.5E-86 T 10-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 Pfam PF00403 Heavy-metal-associated domain 16 73 3.1E-11 T 10-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 Gene3D G3DSA:3.30.70.100 10 75 4.5E-23 T 10-03-2017 CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 Pfam PF00122 E1-E2 ATPase 220 440 1.2E-63 T 10-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 168 754 2.1E-182 T 10-03-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 Gene3D G3DSA:3.40.1110.10 465 579 1.6E-19 T 10-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 SUPERFAMILY SSF81653 255 349 2.62E-25 T 10-03-2017 CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 ProSitePatterns PS01047 Heavy-metal-associated domain. 16 44 - T 10-03-2017 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 Pfam PF00702 haloacid dehalogenase-like hydrolase 445 666 4.5E-46 T 10-03-2017 CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 Gene3D G3DSA:2.70.150.10 168 350 1.7E-29 T 10-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 SUPERFAMILY SSF81665 350 443 8.24E-16 T 10-03-2017 CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 SUPERFAMILY SSF81665 219 250 8.24E-16 T 10-03-2017 CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 SUPERFAMILY SSF81665 701 732 8.24E-16 T 10-03-2017 CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 SUPERFAMILY SSF56784 447 467 1.52E-59 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 SUPERFAMILY SSF56784 549 752 1.52E-59 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 SUPERFAMILY SSF55008 10 78 1.96E-18 T 10-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 675 687 2.3E-25 T 10-03-2017 CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 577 588 2.3E-25 T 10-03-2017 CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 449 463 2.3E-25 T 10-03-2017 CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 299 313 2.3E-25 T 10-03-2017 CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 599 609 2.3E-25 T 10-03-2017 CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 652 671 2.3E-25 T 10-03-2017 CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 451 457 - T 10-03-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 Gene3D G3DSA:3.40.50.1000 421 464 3.3E-54 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 Gene3D G3DSA:3.40.50.1000 580 720 3.3E-54 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 652 668 2.2E-8 T 10-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 624 640 2.2E-8 T 10-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CpPa04_RS10290 3fc82616ad53469dd637014780f1c3bf 762 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 683 708 2.2E-8 T 10-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CpPa04_RS00765 955908b2febf413aa59adf2f7291e87e 106 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 98 20.016 T 10-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family CpPa04_RS00765 955908b2febf413aa59adf2f7291e87e 106 SUPERFAMILY SSF82607 6 98 8.5E-27 T 10-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family CpPa04_RS00765 955908b2febf413aa59adf2f7291e87e 106 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 5 92 1.5E-23 T 10-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family CpPa04_RS00765 955908b2febf413aa59adf2f7291e87e 106 PIRSF PIRSF004555 2 106 1.3E-33 T 10-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family CpPa04_RS00765 955908b2febf413aa59adf2f7291e87e 106 Pfam PF02575 YbaB/EbfC DNA-binding family 11 99 3.6E-30 T 10-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family CpPa04_RS00765 955908b2febf413aa59adf2f7291e87e 106 Gene3D G3DSA:3.30.1310.10 2 105 7.5E-36 T 10-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family CpPa04_RS07470 22ebd751375717aa06595ba9955a74d6 477 SMART SM01240 11 474 1.7E-174 T 10-03-2017 CpPa04_RS07470 22ebd751375717aa06595ba9955a74d6 477 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 13 472 4.8E-101 T 10-03-2017 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 CpPa04_RS07470 22ebd751375717aa06595ba9955a74d6 477 TIGRFAM TIGR01303 IMP_DH_rel_1: IMP dehydrogenase family protein 2 474 5.8E-252 T 10-03-2017 IPR005991 IMP dehydrogenase-related 1 CpPa04_RS07470 22ebd751375717aa06595ba9955a74d6 477 SUPERFAMILY SSF54631 98 203 4.3E-21 T 10-03-2017 CpPa04_RS07470 22ebd751375717aa06595ba9955a74d6 477 PIRSF PIRSF000130 4 476 5.4E-144 T 10-03-2017 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CpPa04_RS07470 22ebd751375717aa06595ba9955a74d6 477 Gene3D G3DSA:3.20.20.70 10 471 5.2E-132 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS07470 22ebd751375717aa06595ba9955a74d6 477 Pfam PF00571 CBS domain 98 143 8.7E-6 T 10-03-2017 IPR000644 CBS domain CpPa04_RS07470 22ebd751375717aa06595ba9955a74d6 477 Pfam PF00571 CBS domain 149 202 1.3E-7 T 10-03-2017 IPR000644 CBS domain CpPa04_RS07470 22ebd751375717aa06595ba9955a74d6 477 SMART SM00116 98 145 9.0E-5 T 10-03-2017 IPR000644 CBS domain CpPa04_RS07470 22ebd751375717aa06595ba9955a74d6 477 SMART SM00116 156 204 4.9E-4 T 10-03-2017 IPR000644 CBS domain CpPa04_RS07470 22ebd751375717aa06595ba9955a74d6 477 SUPERFAMILY SSF51412 202 471 2.09E-89 T 10-03-2017 CpPa04_RS07470 22ebd751375717aa06595ba9955a74d6 477 SUPERFAMILY SSF51412 11 93 2.09E-89 T 10-03-2017 CpPa04_RS03500 9de2483447fae08b77977d0e6a496b6e 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 258 9.5E-52 T 10-03-2017 IPR000150 Cof protein GO:0016787 CpPa04_RS03500 9de2483447fae08b77977d0e6a496b6e 272 SUPERFAMILY SSF56784 1 262 7.97E-61 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS03500 9de2483447fae08b77977d0e6a496b6e 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 10-03-2017 IPR000150 Cof protein GO:0016787 CpPa04_RS03500 9de2483447fae08b77977d0e6a496b6e 272 Gene3D G3DSA:3.30.1240.10 83 177 8.7E-21 T 10-03-2017 CpPa04_RS03500 9de2483447fae08b77977d0e6a496b6e 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 258 2.8E-54 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS03500 9de2483447fae08b77977d0e6a496b6e 272 Gene3D G3DSA:3.40.50.1000 1 73 4.6E-46 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS03500 9de2483447fae08b77977d0e6a496b6e 272 Gene3D G3DSA:3.40.50.1000 178 263 4.6E-46 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS03500 9de2483447fae08b77977d0e6a496b6e 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 231 8.1E-23 T 10-03-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CpPa04_RS09180 fb8822e754a9a67297bdf17ce5b33e91 1276 SUPERFAMILY SSF56801 13 509 3.01E-111 T 10-03-2017 CpPa04_RS09180 fb8822e754a9a67297bdf17ce5b33e91 1276 SMART SM00823 Phosphopantetheine attachment site 497 565 1.4E-5 T 10-03-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CpPa04_RS09180 fb8822e754a9a67297bdf17ce5b33e91 1276 SUPERFAMILY SSF51161 677 801 7.62E-22 T 10-03-2017 IPR011004 Trimeric LpxA-like CpPa04_RS09180 fb8822e754a9a67297bdf17ce5b33e91 1276 Gene3D G3DSA:2.160.10.10 1172 1272 4.8E-19 T 10-03-2017 CpPa04_RS09180 fb8822e754a9a67297bdf17ce5b33e91 1276 Gene3D G3DSA:3.40.50.980 178 308 4.0E-34 T 10-03-2017 CpPa04_RS09180 fb8822e754a9a67297bdf17ce5b33e91 1276 Pfam PF00550 Phosphopantetheine attachment site 498 561 4.0E-13 T 10-03-2017 IPR009081 Phosphopantetheine binding ACP domain CpPa04_RS09180 fb8822e754a9a67297bdf17ce5b33e91 1276 Gene3D G3DSA:3.40.50.980 15 168 3.7E-33 T 10-03-2017 CpPa04_RS09180 fb8822e754a9a67297bdf17ce5b33e91 1276 SUPERFAMILY SSF51161 1156 1273 2.77E-15 T 10-03-2017 IPR011004 Trimeric LpxA-like CpPa04_RS09180 fb8822e754a9a67297bdf17ce5b33e91 1276 Gene3D G3DSA:3.30.300.30 385 485 6.6E-24 T 10-03-2017 CpPa04_RS09180 fb8822e754a9a67297bdf17ce5b33e91 1276 ProSitePatterns PS00012 Phosphopantetheine attachment site. 521 536 - T 10-03-2017 IPR006162 Phosphopantetheine attachment site CpPa04_RS09180 fb8822e754a9a67297bdf17ce5b33e91 1276 Gene3D G3DSA:2.30.38.10 309 379 1.9E-12 T 10-03-2017 CpPa04_RS09180 fb8822e754a9a67297bdf17ce5b33e91 1276 Gene3D G3DSA:1.10.1200.10 494 566 1.1E-19 T 10-03-2017 IPR009081 Phosphopantetheine binding ACP domain CpPa04_RS09180 fb8822e754a9a67297bdf17ce5b33e91 1276 TIGRFAM TIGR02353 NRPS_term_dom: non-ribosomal peptide synthetase terminal domain of unknown function 585 1270 1.5E-226 T 10-03-2017 IPR012728 Non-ribosomal peptide synthetase, C-terminal CpPa04_RS09180 fb8822e754a9a67297bdf17ce5b33e91 1276 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 42 415 7.8E-99 T 10-03-2017 IPR010071 Amino acid adenylation domain CpPa04_RS09180 fb8822e754a9a67297bdf17ce5b33e91 1276 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 748 781 2.7E-7 T 10-03-2017 IPR001451 Hexapeptide repeat CpPa04_RS09180 fb8822e754a9a67297bdf17ce5b33e91 1276 SUPERFAMILY SSF51161 865 1036 2.77E-17 T 10-03-2017 IPR011004 Trimeric LpxA-like CpPa04_RS09180 fb8822e754a9a67297bdf17ce5b33e91 1276 ProSitePatterns PS00455 Putative AMP-binding domain signature. 145 156 - T 10-03-2017 IPR020845 AMP-binding, conserved site CpPa04_RS09180 fb8822e754a9a67297bdf17ce5b33e91 1276 SUPERFAMILY SSF47336 493 561 1.7E-14 T 10-03-2017 IPR009081 Phosphopantetheine binding ACP domain CpPa04_RS09180 fb8822e754a9a67297bdf17ce5b33e91 1276 Gene3D G3DSA:2.160.10.10 656 801 5.7E-19 T 10-03-2017 CpPa04_RS09180 fb8822e754a9a67297bdf17ce5b33e91 1276 Gene3D G3DSA:2.160.10.10 887 1036 1.8E-10 T 10-03-2017 CpPa04_RS09180 fb8822e754a9a67297bdf17ce5b33e91 1276 Pfam PF00501 AMP-binding enzyme 24 390 2.6E-65 T 10-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CpPa04_RS04530 95b719c6f3178dec73969538de401fe5 321 Gene3D G3DSA:1.20.1510.10 37 230 3.8E-52 T 10-03-2017 IPR027469 Cation efflux protein transmembrane domain CpPa04_RS04530 95b719c6f3178dec73969538de401fe5 321 SUPERFAMILY SSF160240 238 307 1.7E-6 T 10-03-2017 CpPa04_RS04530 95b719c6f3178dec73969538de401fe5 321 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 36 309 5.6E-72 T 10-03-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CpPa04_RS04530 95b719c6f3178dec73969538de401fe5 321 SUPERFAMILY SSF161111 35 231 1.96E-47 T 10-03-2017 CpPa04_RS04530 95b719c6f3178dec73969538de401fe5 321 Pfam PF01545 Cation efflux family 43 230 3.1E-43 T 10-03-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CpPa04_RS04815 94769d0974e2cf411d81690d4dcd0bdf 836 Pfam PF03147 Ferredoxin-fold anticodon binding domain 742 835 1.5E-25 T 10-03-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CpPa04_RS04815 94769d0974e2cf411d81690d4dcd0bdf 836 Gene3D G3DSA:3.30.56.10 1 43 2.1E-7 T 10-03-2017 CpPa04_RS04815 94769d0974e2cf411d81690d4dcd0bdf 836 Gene3D G3DSA:3.30.56.10 167 195 2.1E-7 T 10-03-2017 CpPa04_RS04815 94769d0974e2cf411d81690d4dcd0bdf 836 SMART SM00874 422 490 3.8E-17 T 10-03-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CpPa04_RS04815 94769d0974e2cf411d81690d4dcd0bdf 836 SUPERFAMILY SSF46955 425 494 1.65E-15 T 10-03-2017 IPR009061 Putative DNA-binding domain CpPa04_RS04815 94769d0974e2cf411d81690d4dcd0bdf 836 Gene3D G3DSA:3.30.930.10 505 731 8.2E-60 T 10-03-2017 CpPa04_RS04815 94769d0974e2cf411d81690d4dcd0bdf 836 Pfam PF03483 B3/4 domain 236 406 5.8E-65 T 10-03-2017 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CpPa04_RS04815 94769d0974e2cf411d81690d4dcd0bdf 836 SUPERFAMILY SSF50249 49 202 8.57E-25 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS04815 94769d0974e2cf411d81690d4dcd0bdf 836 SMART SM00896 742 835 1.6E-37 T 10-03-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CpPa04_RS04815 94769d0974e2cf411d81690d4dcd0bdf 836 SUPERFAMILY SSF55681 486 602 1.09E-36 T 10-03-2017 CpPa04_RS04815 94769d0974e2cf411d81690d4dcd0bdf 836 SUPERFAMILY SSF55681 631 730 1.09E-36 T 10-03-2017 CpPa04_RS04815 94769d0974e2cf411d81690d4dcd0bdf 836 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 829 39.693 T 10-03-2017 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CpPa04_RS04815 94769d0974e2cf411d81690d4dcd0bdf 836 Pfam PF03484 tRNA synthetase B5 domain 429 489 7.5E-14 T 10-03-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CpPa04_RS04815 94769d0974e2cf411d81690d4dcd0bdf 836 Pfam PF01588 Putative tRNA binding domain 50 152 6.7E-15 T 10-03-2017 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CpPa04_RS04815 94769d0974e2cf411d81690d4dcd0bdf 836 SUPERFAMILY SSF54991 741 835 1.06E-26 T 10-03-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CpPa04_RS04815 94769d0974e2cf411d81690d4dcd0bdf 836 Gene3D G3DSA:3.50.40.10 220 413 2.4E-74 T 10-03-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 CpPa04_RS04815 94769d0974e2cf411d81690d4dcd0bdf 836 Gene3D G3DSA:2.40.50.140 45 165 1.8E-35 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS04815 94769d0974e2cf411d81690d4dcd0bdf 836 SUPERFAMILY SSF56037 218 412 2.88E-65 T 10-03-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 CpPa04_RS04815 94769d0974e2cf411d81690d4dcd0bdf 836 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 835 5.9E-169 T 10-03-2017 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CpPa04_RS04815 94769d0974e2cf411d81690d4dcd0bdf 836 Gene3D G3DSA:3.30.56.20 423 494 8.1E-21 T 10-03-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CpPa04_RS04815 94769d0974e2cf411d81690d4dcd0bdf 836 Gene3D G3DSA:3.30.70.380 744 835 9.2E-29 T 10-03-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CpPa04_RS04815 94769d0974e2cf411d81690d4dcd0bdf 836 SMART SM00873 233 406 1.2E-83 T 10-03-2017 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CpPa04_RS02135 b0b3a4236753a241e0d4a9a5972cbbea 351 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 78 98 1.8E-51 T 10-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CpPa04_RS02135 b0b3a4236753a241e0d4a9a5972cbbea 351 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 273 282 1.8E-51 T 10-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CpPa04_RS02135 b0b3a4236753a241e0d4a9a5972cbbea 351 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.8E-51 T 10-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CpPa04_RS02135 b0b3a4236753a241e0d4a9a5972cbbea 351 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 132 144 1.8E-51 T 10-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CpPa04_RS02135 b0b3a4236753a241e0d4a9a5972cbbea 351 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 99 118 1.8E-51 T 10-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CpPa04_RS02135 b0b3a4236753a241e0d4a9a5972cbbea 351 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 156 177 1.8E-51 T 10-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CpPa04_RS02135 b0b3a4236753a241e0d4a9a5972cbbea 351 ProSitePatterns PS01016 Glycoprotease family signature. 98 118 - T 10-03-2017 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618|Reactome: R-HSA-6782315 CpPa04_RS02135 b0b3a4236753a241e0d4a9a5972cbbea 351 Gene3D G3DSA:3.30.420.40 1 160 2.0E-38 T 10-03-2017 CpPa04_RS02135 b0b3a4236753a241e0d4a9a5972cbbea 351 Pfam PF00814 Glycoprotease family 28 316 2.5E-91 T 10-03-2017 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CpPa04_RS02135 b0b3a4236753a241e0d4a9a5972cbbea 351 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 342 59.19 T 10-03-2017 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CpPa04_RS02135 b0b3a4236753a241e0d4a9a5972cbbea 351 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 322 3.2E-120 T 10-03-2017 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CpPa04_RS02135 b0b3a4236753a241e0d4a9a5972cbbea 351 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 316 9.1E-94 T 10-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CpPa04_RS02135 b0b3a4236753a241e0d4a9a5972cbbea 351 SUPERFAMILY SSF53067 103 317 6.8E-33 T 10-03-2017 CpPa04_RS02135 b0b3a4236753a241e0d4a9a5972cbbea 351 SUPERFAMILY SSF53067 3 123 2.42E-24 T 10-03-2017 CpPa04_RS06450 d9274f87f04ce35318927c23684937fc 89 SMART SM01387 8 88 2.1E-49 T 10-03-2017 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS06450 d9274f87f04ce35318927c23684937fc 89 Pfam PF00312 Ribosomal protein S15 8 88 6.7E-36 T 10-03-2017 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS06450 d9274f87f04ce35318927c23684937fc 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 10-03-2017 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS06450 d9274f87f04ce35318927c23684937fc 89 SUPERFAMILY SSF47060 3 89 1.21E-34 T 10-03-2017 IPR009068 S15/NS1, RNA-binding CpPa04_RS06450 d9274f87f04ce35318927c23684937fc 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 9.0E-27 T 10-03-2017 CpPa04_RS06450 d9274f87f04ce35318927c23684937fc 89 Gene3D G3DSA:1.10.287.10 3 89 1.6E-37 T 10-03-2017 IPR009068 S15/NS1, RNA-binding CpPa04_RS06450 d9274f87f04ce35318927c23684937fc 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 4.3E-38 T 10-03-2017 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS06450 d9274f87f04ce35318927c23684937fc 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.084 T 10-03-2017 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS05715 390aad0e0cdef37a55792784b9545ba5 417 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 5 405 1.4E-112 T 10-03-2017 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5 CpPa04_RS05715 390aad0e0cdef37a55792784b9545ba5 417 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 380 6.3E-60 T 10-03-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CpPa04_RS05715 390aad0e0cdef37a55792784b9545ba5 417 SUPERFAMILY SSF52507 3 176 1.96E-54 T 10-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CpPa04_RS05715 390aad0e0cdef37a55792784b9545ba5 417 Gene3D G3DSA:3.40.50.10300 183 413 5.2E-70 T 10-03-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CpPa04_RS05715 390aad0e0cdef37a55792784b9545ba5 417 Gene3D G3DSA:3.40.50.1950 3 181 8.9E-57 T 10-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CpPa04_RS05715 390aad0e0cdef37a55792784b9545ba5 417 SUPERFAMILY SSF102645 184 411 2.49E-59 T 10-03-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CpPa04_RS05715 390aad0e0cdef37a55792784b9545ba5 417 Pfam PF02441 Flavoprotein 6 131 3.5E-28 T 10-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CpPa04_RS01635 65f2ddb58bbb36957c84b667b74f9874 266 SUPERFAMILY SSF52540 7 234 9.57E-60 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01635 65f2ddb58bbb36957c84b667b74f9874 266 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS01635 65f2ddb58bbb36957c84b667b74f9874 266 Pfam PF00005 ABC transporter 24 168 4.9E-28 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS01635 65f2ddb58bbb36957c84b667b74f9874 266 SMART SM00382 32 223 4.5E-18 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS01635 65f2ddb58bbb36957c84b667b74f9874 266 TIGRFAM TIGR03771 anch_rpt_ABC: anchored repeat-type ABC transporter, ATP-binding subunit 29 250 8.7E-106 T 10-03-2017 IPR022508 ABC transporter, anchored repeat-type, ATP-binding subunit CpPa04_RS01635 65f2ddb58bbb36957c84b667b74f9874 266 Gene3D G3DSA:3.40.50.300 4 228 3.1E-60 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS10060 88e4262b6d7b41a499934fc070eae3ec 382 Gene3D G3DSA:3.90.1300.10 5 382 1.4E-53 T 10-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CpPa04_RS10060 88e4262b6d7b41a499934fc070eae3ec 382 SUPERFAMILY SSF75304 8 381 1.83E-61 T 10-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CpPa04_RS10060 88e4262b6d7b41a499934fc070eae3ec 382 ProSitePatterns PS00571 Amidases signature. 124 155 - T 10-03-2017 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 CpPa04_RS10060 88e4262b6d7b41a499934fc070eae3ec 382 Pfam PF01425 Amidase 196 358 9.4E-7 T 10-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CpPa04_RS10060 88e4262b6d7b41a499934fc070eae3ec 382 Pfam PF01425 Amidase 17 170 6.3E-34 T 10-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CpPa04_RS00420 58862922e6a2ee591de61342c73dad89 818 Pfam PF00270 DEAD/DEAH box helicase 25 179 5.1E-9 T 10-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CpPa04_RS00420 58862922e6a2ee591de61342c73dad89 818 SMART SM00847 401 480 6.1E-9 T 10-03-2017 IPR007502 Helicase-associated domain GO:0004386 CpPa04_RS00420 58862922e6a2ee591de61342c73dad89 818 SMART SM00487 11 200 1.1E-16 T 10-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CpPa04_RS00420 58862922e6a2ee591de61342c73dad89 818 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 13 815 7.4E-182 T 10-03-2017 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type CpPa04_RS00420 58862922e6a2ee591de61342c73dad89 818 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 133 142 - T 10-03-2017 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site GO:0003676|GO:0005524|GO:0008026 CpPa04_RS00420 58862922e6a2ee591de61342c73dad89 818 PIRSF PIRSF005496 8 818 1.5E-247 T 10-03-2017 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type CpPa04_RS00420 58862922e6a2ee591de61342c73dad89 818 SUPERFAMILY SSF52540 25 351 2.61E-45 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00420 58862922e6a2ee591de61342c73dad89 818 Pfam PF08482 ATP-dependent helicase C-terminal 675 804 7.9E-47 T 10-03-2017 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal CpPa04_RS00420 58862922e6a2ee591de61342c73dad89 818 Gene3D G3DSA:3.40.50.300 13 175 1.4E-38 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00420 58862922e6a2ee591de61342c73dad89 818 SMART SM00490 241 341 7.0E-13 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS00420 58862922e6a2ee591de61342c73dad89 818 Gene3D G3DSA:3.40.50.300 222 356 2.6E-16 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00420 58862922e6a2ee591de61342c73dad89 818 Pfam PF04408 Helicase associated domain (HA2) 402 454 3.6E-11 T 10-03-2017 IPR007502 Helicase-associated domain GO:0004386 CpPa04_RS00420 58862922e6a2ee591de61342c73dad89 818 Pfam PF00271 Helicase conserved C-terminal domain 227 341 1.0E-12 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS00900 a31d6e2ae352d84abc0bf89c634e2717 512 SUPERFAMILY SSF56634 19 508 1.83E-185 T 10-03-2017 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 CpPa04_RS00900 a31d6e2ae352d84abc0bf89c634e2717 512 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 347 355 - T 10-03-2017 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 CpPa04_RS00900 a31d6e2ae352d84abc0bf89c634e2717 512 Pfam PF06628 Catalase-related immune-responsive 447 505 5.5E-17 T 10-03-2017 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 CpPa04_RS00900 a31d6e2ae352d84abc0bf89c634e2717 512 SMART SM01060 22 405 2.2E-250 T 10-03-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 CpPa04_RS00900 a31d6e2ae352d84abc0bf89c634e2717 512 Pfam PF00199 Catalase 22 402 4.1E-172 T 10-03-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 CpPa04_RS00900 a31d6e2ae352d84abc0bf89c634e2717 512 PIRSF PIRSF038928 11 512 1.8E-216 T 10-03-2017 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 CpPa04_RS00900 a31d6e2ae352d84abc0bf89c634e2717 512 PRINTS PR00067 Catalase signature 118 135 8.7E-63 T 10-03-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 CpPa04_RS00900 a31d6e2ae352d84abc0bf89c634e2717 512 PRINTS PR00067 Catalase signature 97 115 8.7E-63 T 10-03-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 CpPa04_RS00900 a31d6e2ae352d84abc0bf89c634e2717 512 PRINTS PR00067 Catalase signature 302 329 8.7E-63 T 10-03-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 CpPa04_RS00900 a31d6e2ae352d84abc0bf89c634e2717 512 PRINTS PR00067 Catalase signature 334 360 8.7E-63 T 10-03-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 CpPa04_RS00900 a31d6e2ae352d84abc0bf89c634e2717 512 PRINTS PR00067 Catalase signature 35 58 8.7E-63 T 10-03-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 CpPa04_RS00900 a31d6e2ae352d84abc0bf89c634e2717 512 PRINTS PR00067 Catalase signature 137 155 8.7E-63 T 10-03-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 CpPa04_RS00900 a31d6e2ae352d84abc0bf89c634e2717 512 Gene3D G3DSA:2.40.180.10 15 371 1.0E-160 T 10-03-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 CpPa04_RS05690 0eba4793f22454cdada4b8c21189a340 504 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 286 300 1.6E-21 T 10-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CpPa04_RS05690 0eba4793f22454cdada4b8c21189a340 504 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 320 330 1.6E-21 T 10-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CpPa04_RS05690 0eba4793f22454cdada4b8c21189a340 504 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 383 395 1.6E-21 T 10-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CpPa04_RS05690 0eba4793f22454cdada4b8c21189a340 504 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 433 449 1.6E-21 T 10-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CpPa04_RS05690 0eba4793f22454cdada4b8c21189a340 504 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 484 501 1.6E-21 T 10-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CpPa04_RS05690 0eba4793f22454cdada4b8c21189a340 504 SUPERFAMILY SSF53335 204 501 3.01E-49 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS05690 0eba4793f22454cdada4b8c21189a340 504 Pfam PF01189 16S rRNA methyltransferase RsmB/F 315 500 4.5E-51 T 10-03-2017 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CpPa04_RS05690 0eba4793f22454cdada4b8c21189a340 504 Pfam PF01029 NusB family 67 189 2.3E-27 T 10-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CpPa04_RS05690 0eba4793f22454cdada4b8c21189a340 504 SUPERFAMILY SSF48013 67 218 7.33E-33 T 10-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CpPa04_RS05690 0eba4793f22454cdada4b8c21189a340 504 Gene3D G3DSA:1.10.940.10 67 219 6.5E-46 T 10-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CpPa04_RS05690 0eba4793f22454cdada4b8c21189a340 504 Gene3D G3DSA:3.40.50.150 297 501 1.9E-43 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS04825 c23a74d3a21e8a83396050544768cb55 386 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 18 384 1.0E-146 T 10-03-2017 CpPa04_RS04825 c23a74d3a21e8a83396050544768cb55 386 SUPERFAMILY SSF56266 9 382 4.58E-119 T 10-03-2017 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CpPa04_RS04825 c23a74d3a21e8a83396050544768cb55 386 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 386 124.715 T 10-03-2017 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CpPa04_RS04825 c23a74d3a21e8a83396050544768cb55 386 Pfam PF01960 ArgJ family 14 386 9.2E-123 T 10-03-2017 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CpPa04_RS04825 c23a74d3a21e8a83396050544768cb55 386 Gene3D G3DSA:3.60.70.12 4 261 3.3E-89 T 10-03-2017 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CpPa04_RS04825 c23a74d3a21e8a83396050544768cb55 386 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 4 385 2.3E-104 T 10-03-2017 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CpPa04_RS09240 bff3900e5cfa7986439321d0601e3fe0 556 Pfam PF00361 Proton-conducting membrane transporter 140 424 6.4E-64 T 10-03-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CpPa04_RS09240 bff3900e5cfa7986439321d0601e3fe0 556 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 247 271 5.5E-16 T 10-03-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CpPa04_RS09240 bff3900e5cfa7986439321d0601e3fe0 556 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 176 200 5.5E-16 T 10-03-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CpPa04_RS09240 bff3900e5cfa7986439321d0601e3fe0 556 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 333 352 5.5E-16 T 10-03-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CpPa04_RS09240 bff3900e5cfa7986439321d0601e3fe0 556 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 146 165 5.5E-16 T 10-03-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CpPa04_RS09240 bff3900e5cfa7986439321d0601e3fe0 556 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 385 411 5.5E-16 T 10-03-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CpPa04_RS05140 db939b0d08ae2f64bcba4aa8ebd8846c 452 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 14 339 2.3E-52 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS05140 db939b0d08ae2f64bcba4aa8ebd8846c 452 Gene3D G3DSA:3.50.50.60 115 347 1.3E-30 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS05140 db939b0d08ae2f64bcba4aa8ebd8846c 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 3.0E-7 T 10-03-2017 CpPa04_RS05140 db939b0d08ae2f64bcba4aa8ebd8846c 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 15 34 3.0E-7 T 10-03-2017 CpPa04_RS05140 db939b0d08ae2f64bcba4aa8ebd8846c 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 110 128 3.0E-7 T 10-03-2017 CpPa04_RS05140 db939b0d08ae2f64bcba4aa8ebd8846c 452 Gene3D G3DSA:3.50.50.60 12 114 4.4E-21 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS05140 db939b0d08ae2f64bcba4aa8ebd8846c 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 2.7E-7 T 10-03-2017 CpPa04_RS05140 db939b0d08ae2f64bcba4aa8ebd8846c 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 14 36 2.7E-7 T 10-03-2017 CpPa04_RS05140 db939b0d08ae2f64bcba4aa8ebd8846c 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 316 323 2.7E-7 T 10-03-2017 CpPa04_RS05140 db939b0d08ae2f64bcba4aa8ebd8846c 452 SUPERFAMILY SSF51905 12 349 2.33E-32 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS05825 86c099dbf13af08fa71c53b89cf56a65 382 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 19 375 1.3E-45 T 10-03-2017 IPR003770 Uncharacterised protein family UPF0755, YceG-like CpPa04_RS05825 86c099dbf13af08fa71c53b89cf56a65 382 Pfam PF02618 YceG-like family 54 370 1.2E-61 T 10-03-2017 IPR003770 Uncharacterised protein family UPF0755, YceG-like CpPa04_RS05825 86c099dbf13af08fa71c53b89cf56a65 382 Gene3D G3DSA:3.30.160.60 343 370 2.2E-6 T 10-03-2017 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 CpPa04_RS09725 f678b7f61dadf957d9a4bbb81cd40c68 256 Gene3D G3DSA:3.40.50.300 2 232 1.0E-64 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09725 f678b7f61dadf957d9a4bbb81cd40c68 256 Pfam PF00005 ABC transporter 18 165 2.0E-30 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS09725 f678b7f61dadf957d9a4bbb81cd40c68 256 SMART SM00382 26 214 1.9E-17 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS09725 f678b7f61dadf957d9a4bbb81cd40c68 256 SUPERFAMILY SSF52540 2 230 3.04E-62 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09725 f678b7f61dadf957d9a4bbb81cd40c68 256 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS03640 2ff371921811f2602af74f21488f1382 323 Gene3D G3DSA:3.30.420.150 131 315 1.5E-57 T 10-03-2017 CpPa04_RS03640 2ff371921811f2602af74f21488f1382 323 SUPERFAMILY SSF53067 3 127 3.11E-32 T 10-03-2017 CpPa04_RS03640 2ff371921811f2602af74f21488f1382 323 Pfam PF02541 Ppx/GppA phosphatase family 18 293 7.3E-63 T 10-03-2017 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 CpPa04_RS03640 2ff371921811f2602af74f21488f1382 323 SUPERFAMILY SSF53067 134 315 4.32E-37 T 10-03-2017 CpPa04_RS03640 2ff371921811f2602af74f21488f1382 323 Gene3D G3DSA:3.30.420.40 2 128 1.1E-44 T 10-03-2017 CpPa04_RS07275 77dbbda89bf17d188f0597c3e96c283a 366 Gene3D G3DSA:3.30.470.10 10 179 1.0E-70 T 10-03-2017 CpPa04_RS07275 77dbbda89bf17d188f0597c3e96c283a 366 PIRSF PIRSF006468 3 366 7.4E-133 T 10-03-2017 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: R-HSA-70895 CpPa04_RS07275 77dbbda89bf17d188f0597c3e96c283a 366 SUPERFAMILY SSF56752 4 362 1.28E-113 T 10-03-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CpPa04_RS07275 77dbbda89bf17d188f0597c3e96c283a 366 Gene3D G3DSA:3.20.10.10 180 352 2.2E-64 T 10-03-2017 CpPa04_RS07275 77dbbda89bf17d188f0597c3e96c283a 366 Pfam PF01063 Amino-transferase class IV 74 319 3.0E-28 T 10-03-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CpPa04_RS07275 77dbbda89bf17d188f0597c3e96c283a 366 ProSitePatterns PS00770 Aminotransferases class-IV signature. 238 271 - T 10-03-2017 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 CpPa04_RS07275 77dbbda89bf17d188f0597c3e96c283a 366 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 48 363 2.9E-135 T 10-03-2017 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: R-HSA-70895 CpPa04_RS00860 e62fd27aeb6c42f46c0e9fadd849fa69 518 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 486 518 6.5E-4 T 10-03-2017 IPR019931 LPXTG cell wall anchor domain CpPa04_RS00860 e62fd27aeb6c42f46c0e9fadd849fa69 518 Pfam PF08341 Thioester domain 62 241 3.1E-18 T 10-03-2017 IPR013552 Thioester domain CpPa04_RS04110 38bae6979264b9e11a1197ec351759db 371 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 214 367 6.3E-17 T 10-03-2017 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 CpPa04_RS04110 38bae6979264b9e11a1197ec351759db 371 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 179 196 - T 10-03-2017 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 CpPa04_RS04110 38bae6979264b9e11a1197ec351759db 371 SUPERFAMILY SSF54197 221 371 3.09E-33 T 10-03-2017 IPR011146 HIT-like domain GO:0003824 CpPa04_RS04110 38bae6979264b9e11a1197ec351759db 371 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 41 203 8.2E-31 T 10-03-2017 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 CpPa04_RS04110 38bae6979264b9e11a1197ec351759db 371 SUPERFAMILY SSF54197 40 203 7.53E-47 T 10-03-2017 IPR011146 HIT-like domain GO:0003824 CpPa04_RS04110 38bae6979264b9e11a1197ec351759db 371 Gene3D G3DSA:3.30.428.10 207 370 5.1E-45 T 10-03-2017 IPR011146 HIT-like domain GO:0003824 CpPa04_RS04110 38bae6979264b9e11a1197ec351759db 371 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 44 369 1.2E-41 T 10-03-2017 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 CpPa04_RS04110 38bae6979264b9e11a1197ec351759db 371 Gene3D G3DSA:3.30.428.10 65 203 8.6E-36 T 10-03-2017 IPR011146 HIT-like domain GO:0003824 CpPa04_RS04110 38bae6979264b9e11a1197ec351759db 371 PIRSF PIRSF000808 34 371 6.8E-96 T 10-03-2017 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 CpPa04_RS04685 7ff4d377dc15c67cc66eed015c27add4 162 Pfam PF01467 Cytidylyltransferase-like 7 137 1.2E-13 T 10-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CpPa04_RS04685 7ff4d377dc15c67cc66eed015c27add4 162 SUPERFAMILY SSF52374 4 159 3.49E-37 T 10-03-2017 CpPa04_RS04685 7ff4d377dc15c67cc66eed015c27add4 162 Gene3D G3DSA:3.40.50.620 3 160 8.6E-49 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS04685 7ff4d377dc15c67cc66eed015c27add4 162 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 162 31.277 T 10-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 CpPa04_RS04685 7ff4d377dc15c67cc66eed015c27add4 162 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 61 1.0E-15 T 10-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CpPa04_RS04685 7ff4d377dc15c67cc66eed015c27add4 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 2.9E-33 T 10-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 CpPa04_RS04685 7ff4d377dc15c67cc66eed015c27add4 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 2.9E-33 T 10-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 CpPa04_RS04685 7ff4d377dc15c67cc66eed015c27add4 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 2.9E-33 T 10-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 CpPa04_RS04685 7ff4d377dc15c67cc66eed015c27add4 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 116 138 2.9E-33 T 10-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 CpPa04_RS04685 7ff4d377dc15c67cc66eed015c27add4 162 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 160 6.3E-50 T 10-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 CpPa04_RS05225 f416b3a89e93e598f2c0f3707b36e6e1 422 Gene3D G3DSA:3.30.950.10 128 226 3.3E-16 T 10-03-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS05225 f416b3a89e93e598f2c0f3707b36e6e1 422 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 25 219 6.0E-47 T 10-03-2017 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 CpPa04_RS05225 f416b3a89e93e598f2c0f3707b36e6e1 422 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 23 210 3.9E-19 T 10-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS05225 f416b3a89e93e598f2c0f3707b36e6e1 422 PIRSF PIRSF036428 19 418 2.4E-126 T 10-03-2017 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|KEGG: 00860+2.1.1.132|MetaCyc: PWY-2201|MetaCyc: PWY-3841 CpPa04_RS05225 f416b3a89e93e598f2c0f3707b36e6e1 422 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 246 368 5.6E-29 T 10-03-2017 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.196|MetaCyc: PWY-2201|MetaCyc: PWY-7377 CpPa04_RS05225 f416b3a89e93e598f2c0f3707b36e6e1 422 Gene3D G3DSA:3.40.50.150 246 389 3.3E-18 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS05225 f416b3a89e93e598f2c0f3707b36e6e1 422 SUPERFAMILY SSF53335 238 383 5.73E-22 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS05225 f416b3a89e93e598f2c0f3707b36e6e1 422 Gene3D G3DSA:3.40.1010.10 21 127 2.6E-22 T 10-03-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS05225 f416b3a89e93e598f2c0f3707b36e6e1 422 SUPERFAMILY SSF53790 23 222 2.88E-33 T 10-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS01840 6ffb550a5d9ff5fe98d41d05cec01a07 346 Gene3D G3DSA:1.10.3720.10 140 338 7.6E-20 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS01840 6ffb550a5d9ff5fe98d41d05cec01a07 346 SUPERFAMILY SSF161098 138 322 1.96E-19 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS01840 6ffb550a5d9ff5fe98d41d05cec01a07 346 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 71 105 1.7E-9 T 10-03-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CpPa04_RS01840 6ffb550a5d9ff5fe98d41d05cec01a07 346 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 160 338 1.9E-25 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS00505 ff2bb273f7ea526117c957910d8753b4 1094 Pfam PF04602 Mycobacterial cell wall arabinan synthesis protein 21 668 2.5E-260 T 10-03-2017 IPR007680 Arabinofuranosyltransferase, N-terminal GO:0052636|GO:0071766 CpPa04_RS00505 ff2bb273f7ea526117c957910d8753b4 1094 Gene3D G3DSA:2.60.120.610 41 212 8.9E-58 T 10-03-2017 IPR027451 Arabinofuranosyltransferase, domain 1 CpPa04_RS00505 ff2bb273f7ea526117c957910d8753b4 1094 Pfam PF14896 EmbC C-terminal domain 708 1089 3.2E-146 T 10-03-2017 IPR032731 Arabinosyltransferase, C-terminal CpPa04_RS00715 a36584a4e92f84d5b8614af15fb3b9dc 288 Gene3D G3DSA:3.40.50.620 4 66 1.6E-41 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS00715 a36584a4e92f84d5b8614af15fb3b9dc 288 Gene3D G3DSA:3.40.50.620 181 230 1.6E-41 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS00715 a36584a4e92f84d5b8614af15fb3b9dc 288 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 246 2.8E-42 T 10-03-2017 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 CpPa04_RS00715 a36584a4e92f84d5b8614af15fb3b9dc 288 Gene3D G3DSA:3.90.800.10 67 174 5.5E-15 T 10-03-2017 CpPa04_RS00715 a36584a4e92f84d5b8614af15fb3b9dc 288 SUPERFAMILY SSF52374 4 285 5.63E-69 T 10-03-2017 CpPa04_RS00715 a36584a4e92f84d5b8614af15fb3b9dc 288 PRINTS PR00987 Glutamyl-tRNA synthetase signature 34 47 7.3E-16 T 10-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CpPa04_RS00715 a36584a4e92f84d5b8614af15fb3b9dc 288 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 7.3E-16 T 10-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CpPa04_RS00715 a36584a4e92f84d5b8614af15fb3b9dc 288 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 7.3E-16 T 10-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CpPa04_RS00715 a36584a4e92f84d5b8614af15fb3b9dc 288 PRINTS PR00987 Glutamyl-tRNA synthetase signature 5 17 7.3E-16 T 10-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CpPa04_RS00715 a36584a4e92f84d5b8614af15fb3b9dc 288 PRINTS PR00987 Glutamyl-tRNA synthetase signature 19 30 7.3E-16 T 10-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CpPa04_RS00715 a36584a4e92f84d5b8614af15fb3b9dc 288 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 2 288 37.06 T 10-03-2017 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 CpPa04_RS03765 13f84fc7beac725b9b970af3806e3f7e 98 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 22 82 13.456 T 10-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CpPa04_RS03765 13f84fc7beac725b9b970af3806e3f7e 98 Pfam PF02609 Exonuclease VII small subunit 23 74 1.5E-16 T 10-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CpPa04_RS03765 13f84fc7beac725b9b970af3806e3f7e 98 SUPERFAMILY SSF116842 16 79 6.67E-17 T 10-03-2017 CpPa04_RS03765 13f84fc7beac725b9b970af3806e3f7e 98 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 19 63 1.0E-15 T 10-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CpPa04_RS03765 13f84fc7beac725b9b970af3806e3f7e 98 Gene3D G3DSA:1.10.287.1040 18 83 2.1E-22 T 10-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CpPa04_RS03765 13f84fc7beac725b9b970af3806e3f7e 98 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 22 77 1.9E-20 T 10-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CpPa04_RS03280 f786dcfe7b1647e327f840aa7d1ba890 208 SUPERFAMILY SSF53328 18 194 8.77E-49 T 10-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CpPa04_RS03280 f786dcfe7b1647e327f840aa7d1ba890 208 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 18 198 4.5E-59 T 10-03-2017 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CpPa04_RS03280 f786dcfe7b1647e327f840aa7d1ba890 208 Pfam PF00551 Formyl transferase 18 191 4.9E-45 T 10-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CpPa04_RS03280 f786dcfe7b1647e327f840aa7d1ba890 208 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 17 197 26.234 T 10-03-2017 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CpPa04_RS03280 f786dcfe7b1647e327f840aa7d1ba890 208 Gene3D G3DSA:3.40.50.170 18 197 5.7E-60 T 10-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CpPa04_RS10130 f15ebe54c219ae297cb888b8fca71470 194 Gene3D G3DSA:3.40.50.360 2 189 1.1E-40 T 10-03-2017 IPR029039 Flavoprotein-like domain CpPa04_RS10130 f15ebe54c219ae297cb888b8fca71470 194 Pfam PF03358 NADPH-dependent FMN reductase 6 156 3.5E-23 T 10-03-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CpPa04_RS10130 f15ebe54c219ae297cb888b8fca71470 194 SUPERFAMILY SSF52218 7 184 1.32E-37 T 10-03-2017 IPR029039 Flavoprotein-like domain CpPa04_RS04120 886c39b774d7bd8121bb83d59940889b 660 Pfam PF03880 DbpA RNA binding domain 546 615 1.2E-19 T 10-03-2017 IPR005580 DbpA, RNA-binding domain CpPa04_RS04120 886c39b774d7bd8121bb83d59940889b 660 Gene3D G3DSA:3.40.50.300 273 434 3.0E-54 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04120 886c39b774d7bd8121bb83d59940889b 660 SUPERFAMILY SSF52540 134 421 4.57E-75 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04120 886c39b774d7bd8121bb83d59940889b 660 Gene3D G3DSA:3.40.50.300 58 272 2.1E-80 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04120 886c39b774d7bd8121bb83d59940889b 660 SMART SM00487 85 283 4.8E-66 T 10-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CpPa04_RS04120 886c39b774d7bd8121bb83d59940889b 660 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 214 222 - T 10-03-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CpPa04_RS04120 886c39b774d7bd8121bb83d59940889b 660 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 61 617 45.948 T 10-03-2017 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 CpPa04_RS04120 886c39b774d7bd8121bb83d59940889b 660 Pfam PF00270 DEAD/DEAH box helicase 91 255 4.3E-52 T 10-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CpPa04_RS04120 886c39b774d7bd8121bb83d59940889b 660 SMART SM00490 319 400 2.7E-32 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS04120 886c39b774d7bd8121bb83d59940889b 660 Pfam PF00271 Helicase conserved C-terminal domain 292 400 8.8E-28 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS09900 250eae7abec452f35a21aff4fbe22825 115 Pfam PF11255 Protein of unknown function (DUF3054) 5 105 2.9E-28 T 10-03-2017 IPR021414 Protein of unknown function DUF3054 CpPa04_RS09565 8ab082673e1be090248cdef8684950f3 376 SUPERFAMILY SSF52343 228 368 9.43E-16 T 10-03-2017 CpPa04_RS09565 8ab082673e1be090248cdef8684950f3 376 Gene3D G3DSA:2.40.30.10 130 216 8.4E-7 T 10-03-2017 CpPa04_RS09565 8ab082673e1be090248cdef8684950f3 376 Gene3D G3DSA:3.40.50.80 227 369 3.4E-19 T 10-03-2017 CpPa04_RS09565 8ab082673e1be090248cdef8684950f3 376 SUPERFAMILY SSF63380 130 218 4.12E-6 T 10-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CpPa04_RS00435 60cac4c8c7cdc221203ab4bf4207a29a 233 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 121 129 1.1E-5 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS00435 60cac4c8c7cdc221203ab4bf4207a29a 233 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 1.1E-5 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS00435 60cac4c8c7cdc221203ab4bf4207a29a 233 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 160 1.1E-5 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS00435 60cac4c8c7cdc221203ab4bf4207a29a 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.1E-22 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS00435 60cac4c8c7cdc221203ab4bf4207a29a 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 115 131 2.1E-22 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS00435 60cac4c8c7cdc221203ab4bf4207a29a 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 2.1E-22 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS00435 60cac4c8c7cdc221203ab4bf4207a29a 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 2.1E-22 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS00435 60cac4c8c7cdc221203ab4bf4207a29a 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 2.1E-22 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS00435 60cac4c8c7cdc221203ab4bf4207a29a 233 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 128 156 - T 10-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CpPa04_RS00435 60cac4c8c7cdc221203ab4bf4207a29a 233 Gene3D G3DSA:3.40.50.720 3 224 8.7E-55 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS00435 60cac4c8c7cdc221203ab4bf4207a29a 233 SUPERFAMILY SSF51735 3 225 2.28E-55 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS00435 60cac4c8c7cdc221203ab4bf4207a29a 233 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 184 0.0019 T 10-03-2017 CpPa04_RS00435 60cac4c8c7cdc221203ab4bf4207a29a 233 Pfam PF00106 short chain dehydrogenase 3 178 2.5E-42 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS00825 381698e4f06391e6902f73f46648d090 605 SUPERFAMILY SSF51569 56 364 4.4E-96 T 10-03-2017 CpPa04_RS00825 381698e4f06391e6902f73f46648d090 605 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 37 603 1.6E-257 T 10-03-2017 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CpPa04_RS00825 381698e4f06391e6902f73f46648d090 605 Pfam PF08502 LeuA allosteric (dimerisation) domain 473 604 1.3E-30 T 10-03-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CpPa04_RS00825 381698e4f06391e6902f73f46648d090 605 SMART SM00917 473 604 3.4E-29 T 10-03-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CpPa04_RS00825 381698e4f06391e6902f73f46648d090 605 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 38 605 53.818 T 10-03-2017 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CpPa04_RS00825 381698e4f06391e6902f73f46648d090 605 Pfam PF00682 HMGL-like 67 347 3.6E-84 T 10-03-2017 IPR000891 Pyruvate carboxyltransferase GO:0003824 CpPa04_RS00825 381698e4f06391e6902f73f46648d090 605 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 74 90 - T 10-03-2017 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CpPa04_RS00825 381698e4f06391e6902f73f46648d090 605 Gene3D G3DSA:3.20.20.70 47 445 5.1E-147 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS00825 381698e4f06391e6902f73f46648d090 605 SUPERFAMILY SSF89000 439 489 1.69E-15 T 10-03-2017 CpPa04_RS00825 381698e4f06391e6902f73f46648d090 605 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 277 290 - T 10-03-2017 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CpPa04_RS00825 381698e4f06391e6902f73f46648d090 605 SUPERFAMILY SSF110921 499 603 2.09E-32 T 10-03-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CpPa04_RS04095 75b23d6a9629f90381ac3ea8bea65e0c 295 Gene3D G3DSA:2.70.98.10 10 291 2.7E-33 T 10-03-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 CpPa04_RS04095 75b23d6a9629f90381ac3ea8bea65e0c 295 Pfam PF01263 Aldose 1-epimerase 12 278 2.6E-40 T 10-03-2017 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CpPa04_RS04095 75b23d6a9629f90381ac3ea8bea65e0c 295 SUPERFAMILY SSF74650 11 290 5.76E-50 T 10-03-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CpPa04_RS08465 066a174df6aaba3812a4a6b84202be7f 340 SUPERFAMILY SSF47240 23 340 6.27E-106 T 10-03-2017 IPR009078 Ferritin-like superfamily CpPa04_RS08465 066a174df6aaba3812a4a6b84202be7f 340 PIRSF PIRSF000355 7 337 2.5E-77 T 10-03-2017 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CpPa04_RS08465 066a174df6aaba3812a4a6b84202be7f 340 Gene3D G3DSA:1.10.620.20 24 296 1.3E-91 T 10-03-2017 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: R-HSA-499943 CpPa04_RS08465 066a174df6aaba3812a4a6b84202be7f 340 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 28 340 9.7E-146 T 10-03-2017 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CpPa04_RS08465 066a174df6aaba3812a4a6b84202be7f 340 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 118 134 - T 10-03-2017 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CpPa04_RS08465 066a174df6aaba3812a4a6b84202be7f 340 Pfam PF00268 Ribonucleotide reductase, small chain 30 295 1.4E-87 T 10-03-2017 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CpPa04_RS03875 e15c0ff45b209ec70bff709f05fdd23d 558 ProSitePatterns PS00211 ABC transporters family signature. 444 458 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS03875 e15c0ff45b209ec70bff709f05fdd23d 558 SUPERFAMILY SSF52540 295 543 7.68E-72 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03875 e15c0ff45b209ec70bff709f05fdd23d 558 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 523 551 0.05 T 10-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CpPa04_RS03875 e15c0ff45b209ec70bff709f05fdd23d 558 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 271 2.8E-6 T 10-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CpPa04_RS03875 e15c0ff45b209ec70bff709f05fdd23d 558 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS03875 e15c0ff45b209ec70bff709f05fdd23d 558 Pfam PF00005 ABC transporter 321 471 7.5E-31 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS03875 e15c0ff45b209ec70bff709f05fdd23d 558 Pfam PF00005 ABC transporter 30 188 1.5E-28 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS03875 e15c0ff45b209ec70bff709f05fdd23d 558 SUPERFAMILY SSF52540 9 259 1.3E-63 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03875 e15c0ff45b209ec70bff709f05fdd23d 558 SMART SM00382 329 521 5.5E-18 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS03875 e15c0ff45b209ec70bff709f05fdd23d 558 SMART SM00382 38 237 2.7E-18 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS03875 e15c0ff45b209ec70bff709f05fdd23d 558 Gene3D G3DSA:3.40.50.300 8 261 2.5E-72 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03875 e15c0ff45b209ec70bff709f05fdd23d 558 Gene3D G3DSA:3.40.50.300 294 545 5.5E-77 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00830 955fd6e444033c8022f302682367a670 312 Gene3D G3DSA:1.10.10.10 17 57 1.1E-5 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS00830 955fd6e444033c8022f302682367a670 312 SUPERFAMILY SSF100950 63 310 1.67E-67 T 10-03-2017 CpPa04_RS00830 955fd6e444033c8022f302682367a670 312 Gene3D G3DSA:3.40.50.1360 58 310 3.3E-76 T 10-03-2017 CpPa04_RS00830 955fd6e444033c8022f302682367a670 312 SUPERFAMILY SSF46689 15 72 5.73E-6 T 10-03-2017 IPR009057 Homeodomain-like GO:0003677 CpPa04_RS00830 955fd6e444033c8022f302682367a670 312 Pfam PF04198 Putative sugar-binding domain 61 310 1.8E-63 T 10-03-2017 IPR007324 Sugar-binding domain, putative GO:0030246 CpPa04_RS09925 17b549353e9f6533c8ffb19a8694e63c 615 SUPERFAMILY SSF56801 40 614 2.22E-85 T 10-03-2017 CpPa04_RS09925 17b549353e9f6533c8ffb19a8694e63c 615 Gene3D G3DSA:3.40.50.980 61 212 8.0E-20 T 10-03-2017 CpPa04_RS09925 17b549353e9f6533c8ffb19a8694e63c 615 Gene3D G3DSA:3.30.300.30 504 610 5.6E-15 T 10-03-2017 CpPa04_RS09925 17b549353e9f6533c8ffb19a8694e63c 615 Gene3D G3DSA:2.30.38.10 412 503 2.1E-17 T 10-03-2017 CpPa04_RS09925 17b549353e9f6533c8ffb19a8694e63c 615 Pfam PF00501 AMP-binding enzyme 49 511 1.6E-65 T 10-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CpPa04_RS09925 17b549353e9f6533c8ffb19a8694e63c 615 Gene3D G3DSA:3.40.50.980 213 377 3.5E-22 T 10-03-2017 CpPa04_RS07510 4268809672dc6d43050d4ee374c5d348 1048 SUPERFAMILY SSF81593 888 1039 1.57E-34 T 10-03-2017 CpPa04_RS07510 4268809672dc6d43050d4ee374c5d348 1048 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 184 358 2.0E-27 T 10-03-2017 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CpPa04_RS07510 4268809672dc6d43050d4ee374c5d348 1048 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 634 875 5.8E-66 T 10-03-2017 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CpPa04_RS07510 4268809672dc6d43050d4ee374c5d348 1048 Gene3D G3DSA:3.30.460.10 719 882 2.1E-53 T 10-03-2017 CpPa04_RS07510 4268809672dc6d43050d4ee374c5d348 1048 Gene3D G3DSA:3.30.460.10 222 369 8.1E-40 T 10-03-2017 CpPa04_RS07510 4268809672dc6d43050d4ee374c5d348 1048 SUPERFAMILY SSF81593 375 529 1.57E-35 T 10-03-2017 CpPa04_RS07510 4268809672dc6d43050d4ee374c5d348 1048 SUPERFAMILY SSF81301 606 882 7.85E-66 T 10-03-2017 CpPa04_RS07510 4268809672dc6d43050d4ee374c5d348 1048 SUPERFAMILY SSF81301 180 369 2.84E-45 T 10-03-2017 CpPa04_RS07510 4268809672dc6d43050d4ee374c5d348 1048 SUPERFAMILY SSF81301 71 132 2.84E-45 T 10-03-2017 CpPa04_RS07510 4268809672dc6d43050d4ee374c5d348 1048 Pfam PF08335 GlnD PII-uridylyltransferase 382 529 1.3E-37 T 10-03-2017 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CpPa04_RS07510 4268809672dc6d43050d4ee374c5d348 1048 Pfam PF08335 GlnD PII-uridylyltransferase 896 1039 2.9E-21 T 10-03-2017 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CpPa04_RS06390 92cfd7840f252d8156c077ea121faa28 110 Pfam PF13560 Helix-turn-helix domain 31 90 7.3E-16 T 10-03-2017 CpPa04_RS06390 92cfd7840f252d8156c077ea121faa28 110 SUPERFAMILY SSF47413 26 93 4.22E-15 T 10-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CpPa04_RS06390 92cfd7840f252d8156c077ea121faa28 110 SMART SM00530 35 90 1.3E-12 T 10-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CpPa04_RS06390 92cfd7840f252d8156c077ea121faa28 110 Gene3D G3DSA:1.10.260.40 29 92 1.1E-16 T 10-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CpPa04_RS01860 9fe87ad0d69ea71e711e54e3770c0bca 187 Gene3D G3DSA:3.30.1440.10 7 184 2.1E-73 T 10-03-2017 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01860 9fe87ad0d69ea71e711e54e3770c0bca 187 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 6 184 42.882 T 10-03-2017 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01860 9fe87ad0d69ea71e711e54e3770c0bca 187 SUPERFAMILY SSF55282 8 184 8.48E-73 T 10-03-2017 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01860 9fe87ad0d69ea71e711e54e3770c0bca 187 PIRSF PIRSF002161 2 187 1.5E-63 T 10-03-2017 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01860 9fe87ad0d69ea71e711e54e3770c0bca 187 Pfam PF00673 ribosomal L5P family C-terminus 89 182 7.5E-39 T 10-03-2017 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01860 9fe87ad0d69ea71e711e54e3770c0bca 187 Pfam PF00281 Ribosomal protein L5 29 85 8.3E-26 T 10-03-2017 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS04625 3cd1f4aed3eafc3daace7520a1da9df6 482 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 10 480 57.911 T 10-03-2017 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CpPa04_RS04625 3cd1f4aed3eafc3daace7520a1da9df6 482 Gene3D G3DSA:3.30.499.10 339 480 5.2E-58 T 10-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS04625 3cd1f4aed3eafc3daace7520a1da9df6 482 ProSitePatterns PS00450 Aconitase family signature 1. 353 369 - T 10-03-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CpPa04_RS04625 3cd1f4aed3eafc3daace7520a1da9df6 482 SUPERFAMILY SSF53732 10 480 1.7E-159 T 10-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS04625 3cd1f4aed3eafc3daace7520a1da9df6 482 Gene3D G3DSA:3.30.499.10 10 166 3.3E-24 T 10-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS04625 3cd1f4aed3eafc3daace7520a1da9df6 482 ProSitePatterns PS01244 Aconitase family signature 2. 413 426 - T 10-03-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CpPa04_RS04625 3cd1f4aed3eafc3daace7520a1da9df6 482 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 13 474 3.9E-215 T 10-03-2017 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CpPa04_RS04625 3cd1f4aed3eafc3daace7520a1da9df6 482 Gene3D G3DSA:3.40.1060.10 167 303 1.3E-41 T 10-03-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS04625 3cd1f4aed3eafc3daace7520a1da9df6 482 Pfam PF00330 Aconitase family (aconitate hydratase) 16 471 3.9E-151 T 10-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS04625 3cd1f4aed3eafc3daace7520a1da9df6 482 PRINTS PR00415 Aconitase family signature 96 109 4.3E-46 T 10-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS04625 3cd1f4aed3eafc3daace7520a1da9df6 482 PRINTS PR00415 Aconitase family signature 223 236 4.3E-46 T 10-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS04625 3cd1f4aed3eafc3daace7520a1da9df6 482 PRINTS PR00415 Aconitase family signature 147 162 4.3E-46 T 10-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS04625 3cd1f4aed3eafc3daace7520a1da9df6 482 PRINTS PR00415 Aconitase family signature 413 426 4.3E-46 T 10-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS04625 3cd1f4aed3eafc3daace7520a1da9df6 482 PRINTS PR00415 Aconitase family signature 209 222 4.3E-46 T 10-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS04625 3cd1f4aed3eafc3daace7520a1da9df6 482 PRINTS PR00415 Aconitase family signature 300 314 4.3E-46 T 10-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS04625 3cd1f4aed3eafc3daace7520a1da9df6 482 PRINTS PR00415 Aconitase family signature 122 130 4.3E-46 T 10-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS04625 3cd1f4aed3eafc3daace7520a1da9df6 482 PRINTS PR00415 Aconitase family signature 133 146 4.3E-46 T 10-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS04625 3cd1f4aed3eafc3daace7520a1da9df6 482 PRINTS PR00415 Aconitase family signature 357 368 4.3E-46 T 10-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS06255 ca0505d4350f1e505a98b39b6724bd32 258 SMART SM00420 6 58 2.8E-14 T 10-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CpPa04_RS06255 ca0505d4350f1e505a98b39b6724bd32 258 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 8.4E-16 T 10-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CpPa04_RS06255 ca0505d4350f1e505a98b39b6724bd32 258 SMART SM01134 74 239 7.8E-57 T 10-03-2017 CpPa04_RS06255 ca0505d4350f1e505a98b39b6724bd32 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 7.0E-9 T 10-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CpPa04_RS06255 ca0505d4350f1e505a98b39b6724bd32 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 7.0E-9 T 10-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CpPa04_RS06255 ca0505d4350f1e505a98b39b6724bd32 258 SUPERFAMILY SSF100950 79 239 5.65E-25 T 10-03-2017 CpPa04_RS06255 ca0505d4350f1e505a98b39b6724bd32 258 Gene3D G3DSA:3.40.50.1360 78 221 5.7E-11 T 10-03-2017 CpPa04_RS06255 ca0505d4350f1e505a98b39b6724bd32 258 Pfam PF00455 DeoR C terminal sensor domain 78 238 1.5E-41 T 10-03-2017 IPR014036 DeoR C-terminal sensor domain CpPa04_RS06255 ca0505d4350f1e505a98b39b6724bd32 258 SUPERFAMILY SSF46785 4 70 4.18E-13 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS06255 ca0505d4350f1e505a98b39b6724bd32 258 Gene3D G3DSA:1.10.10.10 5 57 1.0E-9 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS06960 adf712d23239e170f783f84dca0f637b 338 SUPERFAMILY SSF81301 16 201 6.54E-34 T 10-03-2017 CpPa04_RS06960 adf712d23239e170f783f84dca0f637b 338 Gene3D G3DSA:1.10.287.860 158 201 2.3E-12 T 10-03-2017 CpPa04_RS06960 adf712d23239e170f783f84dca0f637b 338 SMART SM00954 47 175 5.2E-20 T 10-03-2017 IPR007685 RelA/SpoT GO:0015969 CpPa04_RS06960 adf712d23239e170f783f84dca0f637b 338 Gene3D G3DSA:3.30.460.10 13 155 2.5E-18 T 10-03-2017 CpPa04_RS06960 adf712d23239e170f783f84dca0f637b 338 Pfam PF04607 Region found in RelA / SpoT proteins 48 172 1.4E-21 T 10-03-2017 IPR007685 RelA/SpoT GO:0015969 CpPa04_RS05515 668ecf704b233e92d70f4f0e0c38d890 369 Gene3D G3DSA:1.10.10.10 293 343 8.2E-4 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS05515 668ecf704b233e92d70f4f0e0c38d890 369 Gene3D G3DSA:3.40.50.300 32 193 3.9E-10 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05515 668ecf704b233e92d70f4f0e0c38d890 369 SUPERFAMILY SSF52540 3 268 5.55E-19 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05515 668ecf704b233e92d70f4f0e0c38d890 369 Pfam PF13191 AAA ATPase domain 17 170 1.1E-10 T 10-03-2017 CpPa04_RS02170 f7312272d82f7c5b4b4721474b628881 506 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 20 494 2.6E-154 T 10-03-2017 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 CpPa04_RS02170 f7312272d82f7c5b4b4721474b628881 506 PIRSF PIRSF000130 11 506 2.0E-199 T 10-03-2017 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CpPa04_RS02170 f7312272d82f7c5b4b4721474b628881 506 SMART SM00116 108 156 1.8E-5 T 10-03-2017 IPR000644 CBS domain CpPa04_RS02170 f7312272d82f7c5b4b4721474b628881 506 SMART SM00116 169 217 5.7E-8 T 10-03-2017 IPR000644 CBS domain CpPa04_RS02170 f7312272d82f7c5b4b4721474b628881 506 Gene3D G3DSA:3.20.20.70 19 506 4.9E-191 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS02170 f7312272d82f7c5b4b4721474b628881 506 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 307 319 - T 10-03-2017 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 CpPa04_RS02170 f7312272d82f7c5b4b4721474b628881 506 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 20 475 2.0E-183 T 10-03-2017 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CpPa04_RS02170 f7312272d82f7c5b4b4721474b628881 506 Pfam PF00571 CBS domain 161 214 3.4E-7 T 10-03-2017 IPR000644 CBS domain CpPa04_RS02170 f7312272d82f7c5b4b4721474b628881 506 Pfam PF00571 CBS domain 105 152 2.4E-8 T 10-03-2017 IPR000644 CBS domain CpPa04_RS02170 f7312272d82f7c5b4b4721474b628881 506 SUPERFAMILY SSF51412 228 497 1.13E-114 T 10-03-2017 CpPa04_RS02170 f7312272d82f7c5b4b4721474b628881 506 SUPERFAMILY SSF51412 16 102 1.13E-114 T 10-03-2017 CpPa04_RS02170 f7312272d82f7c5b4b4721474b628881 506 SMART SM01240 19 494 0.0 T 10-03-2017 CpPa04_RS02170 f7312272d82f7c5b4b4721474b628881 506 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 20 506 81.647 T 10-03-2017 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CpPa04_RS02170 f7312272d82f7c5b4b4721474b628881 506 SUPERFAMILY SSF54631 105 215 1.52E-29 T 10-03-2017 CpPa04_RS04620 d60140801d9da2de953ec638ff59ac90 241 SUPERFAMILY SSF46785 14 80 4.14E-11 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS04620 d60140801d9da2de953ec638ff59ac90 241 Pfam PF09339 IclR helix-turn-helix domain 17 63 1.7E-9 T 10-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CpPa04_RS04620 d60140801d9da2de953ec638ff59ac90 241 SMART SM00346 14 99 3.5E-17 T 10-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CpPa04_RS04620 d60140801d9da2de953ec638ff59ac90 241 Pfam PF01614 Bacterial transcriptional regulator 131 234 1.4E-17 T 10-03-2017 IPR014757 Transcription regulator IclR, C-terminal CpPa04_RS04620 d60140801d9da2de953ec638ff59ac90 241 Gene3D G3DSA:3.30.450.40 80 241 6.3E-41 T 10-03-2017 IPR029016 GAF domain-like CpPa04_RS04620 d60140801d9da2de953ec638ff59ac90 241 SUPERFAMILY SSF55781 77 241 1.31E-36 T 10-03-2017 IPR029016 GAF domain-like CpPa04_RS04620 d60140801d9da2de953ec638ff59ac90 241 Gene3D G3DSA:1.10.10.10 8 72 9.6E-19 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS09470 063ecd3494681a1fb5cb55dee18c1d20 344 SUPERFAMILY SSF51569 4 340 4.21E-99 T 10-03-2017 CpPa04_RS09470 063ecd3494681a1fb5cb55dee18c1d20 344 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 9 339 3.8E-76 T 10-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CpPa04_RS09470 063ecd3494681a1fb5cb55dee18c1d20 344 Pfam PF01116 Fructose-bisphosphate aldolase class-II 9 339 1.2E-83 T 10-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CpPa04_RS09470 063ecd3494681a1fb5cb55dee18c1d20 344 Gene3D G3DSA:3.20.20.70 2 340 5.3E-120 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS09470 063ecd3494681a1fb5cb55dee18c1d20 344 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 3 340 1.6E-138 T 10-03-2017 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 CpPa04_RS09470 063ecd3494681a1fb5cb55dee18c1d20 344 PIRSF PIRSF001359 5 341 9.2E-67 T 10-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CpPa04_RS09470 063ecd3494681a1fb5cb55dee18c1d20 344 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 86 97 - T 10-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CpPa04_RS09470 063ecd3494681a1fb5cb55dee18c1d20 344 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 158 169 - T 10-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CpPa04_RS01245 3aef784726cc792096ee35a2c97213ab 671 Gene3D G3DSA:3.50.50.60 53 297 6.6E-72 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS01245 3aef784726cc792096ee35a2c97213ab 671 Gene3D G3DSA:3.50.50.60 429 481 6.6E-72 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS01245 3aef784726cc792096ee35a2c97213ab 671 Pfam PF02910 Fumarate reductase flavoprotein C-term 536 670 1.6E-34 T 10-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CpPa04_RS01245 3aef784726cc792096ee35a2c97213ab 671 Gene3D G3DSA:1.20.58.100 508 622 1.8E-29 T 10-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CpPa04_RS01245 3aef784726cc792096ee35a2c97213ab 671 SUPERFAMILY SSF46977 528 670 1.57E-35 T 10-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CpPa04_RS01245 3aef784726cc792096ee35a2c97213ab 671 SUPERFAMILY SSF51905 437 480 1.14E-48 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS01245 3aef784726cc792096ee35a2c97213ab 671 SUPERFAMILY SSF51905 57 308 1.14E-48 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS01245 3aef784726cc792096ee35a2c97213ab 671 TIGRFAM TIGR01811 sdhA_Bsu: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 63 670 4.4E-298 T 10-03-2017 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 CpPa04_RS01245 3aef784726cc792096ee35a2c97213ab 671 Pfam PF00890 FAD binding domain 63 472 8.0E-57 T 10-03-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CpPa04_RS01245 3aef784726cc792096ee35a2c97213ab 671 SUPERFAMILY SSF56425 292 434 9.57E-32 T 10-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CpPa04_RS01245 3aef784726cc792096ee35a2c97213ab 671 Gene3D G3DSA:3.90.700.10 298 427 1.1E-20 T 10-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CpPa04_RS09515 ffe5a0901535e7552b574d356454a466 270 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 234 264 0.0016 T 10-03-2017 IPR019931 LPXTG cell wall anchor domain CpPa04_RS02465 910ec6ba84a931cf3956f67ca5de9cd0 209 SUPERFAMILY SSF52972 1 193 2.94E-49 T 10-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like CpPa04_RS02465 910ec6ba84a931cf3956f67ca5de9cd0 209 Hamap MF_00528 Septum formation protein Maf [maf]. 2 198 27.671 T 10-03-2017 IPR003697 Maf-like protein GO:0005737 CpPa04_RS02465 910ec6ba84a931cf3956f67ca5de9cd0 209 PIRSF PIRSF006305 1 200 1.1E-41 T 10-03-2017 IPR003697 Maf-like protein GO:0005737 CpPa04_RS02465 910ec6ba84a931cf3956f67ca5de9cd0 209 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 192 2.4E-45 T 10-03-2017 IPR003697 Maf-like protein GO:0005737 CpPa04_RS02465 910ec6ba84a931cf3956f67ca5de9cd0 209 Pfam PF02545 Maf-like protein 2 192 1.0E-43 T 10-03-2017 IPR003697 Maf-like protein GO:0005737 CpPa04_RS02465 910ec6ba84a931cf3956f67ca5de9cd0 209 Gene3D G3DSA:3.90.950.10 1 197 2.7E-57 T 10-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like CpPa04_RS05405 2115b46de0d9b644912412544e7d1b69 125 SUPERFAMILY SSF52540 4 74 1.73E-15 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05405 2115b46de0d9b644912412544e7d1b69 125 Gene3D G3DSA:3.40.50.300 4 82 1.9E-15 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05405 2115b46de0d9b644912412544e7d1b69 125 Pfam PF00005 ABC transporter 19 71 6.4E-9 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS00260 4b202f8a3907ec4ffb63829971c0ce3b 195 Pfam PF04542 Sigma-70 region 2 33 98 5.0E-16 T 10-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS00260 4b202f8a3907ec4ffb63829971c0ce3b 195 SUPERFAMILY SSF88946 16 112 3.92E-21 T 10-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS00260 4b202f8a3907ec4ffb63829971c0ce3b 195 Gene3D G3DSA:1.10.10.10 127 187 4.7E-16 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS00260 4b202f8a3907ec4ffb63829971c0ce3b 195 Pfam PF08281 Sigma-70, region 4 131 183 5.0E-10 T 10-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS00260 4b202f8a3907ec4ffb63829971c0ce3b 195 SUPERFAMILY SSF88659 124 187 9.38E-13 T 10-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS00260 4b202f8a3907ec4ffb63829971c0ce3b 195 Gene3D G3DSA:1.10.1740.10 14 123 2.0E-21 T 10-03-2017 CpPa04_RS00260 4b202f8a3907ec4ffb63829971c0ce3b 195 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 29 187 1.5E-25 T 10-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS01725 0c0c7b25319b924800963a88156be0e4 708 Pfam PF03764 Elongation factor G, domain IV 482 611 7.7E-44 T 10-03-2017 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CpPa04_RS01725 0c0c7b25319b924800963a88156be0e4 708 PRINTS PR00315 GTP-binding elongation factor signature 96 107 2.0E-16 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS01725 0c0c7b25319b924800963a88156be0e4 708 PRINTS PR00315 GTP-binding elongation factor signature 80 90 2.0E-16 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS01725 0c0c7b25319b924800963a88156be0e4 708 PRINTS PR00315 GTP-binding elongation factor signature 132 141 2.0E-16 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS01725 0c0c7b25319b924800963a88156be0e4 708 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.0E-16 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS01725 0c0c7b25319b924800963a88156be0e4 708 PRINTS PR00315 GTP-binding elongation factor signature 60 68 2.0E-16 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS01725 0c0c7b25319b924800963a88156be0e4 708 Gene3D G3DSA:3.30.70.870 408 483 6.9E-37 T 10-03-2017 CpPa04_RS01725 0c0c7b25319b924800963a88156be0e4 708 Gene3D G3DSA:3.30.230.10 487 612 1.5E-44 T 10-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CpPa04_RS01725 0c0c7b25319b924800963a88156be0e4 708 SUPERFAMILY SSF50447 268 407 1.06E-34 T 10-03-2017 IPR009000 Translation protein, beta-barrel domain CpPa04_RS01725 0c0c7b25319b924800963a88156be0e4 708 Pfam PF00679 Elongation factor G C-terminus 613 699 9.5E-29 T 10-03-2017 IPR000640 Translation elongation factor EFG, V domain CpPa04_RS01725 0c0c7b25319b924800963a88156be0e4 708 SUPERFAMILY SSF52540 8 283 6.0E-108 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01725 0c0c7b25319b924800963a88156be0e4 708 Pfam PF00009 Elongation factor Tu GTP binding domain 11 283 1.2E-66 T 10-03-2017 CpPa04_RS01725 0c0c7b25319b924800963a88156be0e4 708 Gene3D G3DSA:3.30.70.240 613 698 7.0E-32 T 10-03-2017 IPR000640 Translation elongation factor EFG, V domain CpPa04_RS01725 0c0c7b25319b924800963a88156be0e4 708 Gene3D G3DSA:3.40.50.300 7 288 3.0E-104 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01725 0c0c7b25319b924800963a88156be0e4 708 Hamap MF_00054_B Elongation factor G [fusA]. 8 704 106.592 T 10-03-2017 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CpPa04_RS01725 0c0c7b25319b924800963a88156be0e4 708 SUPERFAMILY SSF54980 407 484 3.53E-25 T 10-03-2017 IPR009022 Elongation factor G, III-V domain CpPa04_RS01725 0c0c7b25319b924800963a88156be0e4 708 SMART SM00889 483 611 1.2E-67 T 10-03-2017 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CpPa04_RS01725 0c0c7b25319b924800963a88156be0e4 708 SUPERFAMILY SSF54980 616 702 7.67E-29 T 10-03-2017 IPR009022 Elongation factor G, III-V domain CpPa04_RS01725 0c0c7b25319b924800963a88156be0e4 708 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 182 1.6E-37 T 10-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CpPa04_RS01725 0c0c7b25319b924800963a88156be0e4 708 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 53 68 - T 10-03-2017 IPR031157 Tr-type G domain, conserved site CpPa04_RS01725 0c0c7b25319b924800963a88156be0e4 708 Pfam PF14492 Elongation Factor G, domain II 407 480 1.6E-33 T 10-03-2017 IPR009022 Elongation factor G, III-V domain CpPa04_RS01725 0c0c7b25319b924800963a88156be0e4 708 Gene3D G3DSA:2.40.30.10 309 407 8.8E-37 T 10-03-2017 CpPa04_RS01725 0c0c7b25319b924800963a88156be0e4 708 SUPERFAMILY SSF54211 482 612 4.05E-38 T 10-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CpPa04_RS01725 0c0c7b25319b924800963a88156be0e4 708 SMART SM00838 613 700 4.7E-56 T 10-03-2017 IPR000640 Translation elongation factor EFG, V domain CpPa04_RS01725 0c0c7b25319b924800963a88156be0e4 708 TIGRFAM TIGR00484 EF-G: translation elongation factor G 8 705 0.0 T 10-03-2017 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CpPa04_RS01725 0c0c7b25319b924800963a88156be0e4 708 Pfam PF03144 Elongation factor Tu domain 2 327 394 4.4E-16 T 10-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CpPa04_RS02235 57b0514e8814eb430147bf03daa68233 289 SUPERFAMILY SSF53850 33 282 6.04E-65 T 10-03-2017 CpPa04_RS02235 57b0514e8814eb430147bf03daa68233 289 Gene3D G3DSA:3.40.190.10 33 157 2.7E-41 T 10-03-2017 CpPa04_RS02235 57b0514e8814eb430147bf03daa68233 289 Pfam PF03180 NLPA lipoprotein 34 268 3.9E-58 T 10-03-2017 IPR004872 Lipoprotein NlpA family CpPa04_RS03015 15f0cba27b0c1a74199fb9b6ff55b25e 549 SMART SM00490 424 504 9.3E-9 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS03015 15f0cba27b0c1a74199fb9b6ff55b25e 549 SUPERFAMILY SSF52540 129 349 7.98E-32 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03015 15f0cba27b0c1a74199fb9b6ff55b25e 549 SUPERFAMILY SSF52540 397 515 8.48E-26 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03015 15f0cba27b0c1a74199fb9b6ff55b25e 549 SUPERFAMILY SSF52540 294 364 8.48E-26 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03015 15f0cba27b0c1a74199fb9b6ff55b25e 549 Pfam PF04851 Type III restriction enzyme, res subunit 185 330 1.7E-13 T 10-03-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CpPa04_RS03015 15f0cba27b0c1a74199fb9b6ff55b25e 549 SMART SM00487 182 359 1.9E-23 T 10-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CpPa04_RS03015 15f0cba27b0c1a74199fb9b6ff55b25e 549 Pfam PF16203 ERCC3/RAD25/XPB C-terminal helicase 356 544 7.1E-49 T 10-03-2017 IPR032438 ERCC3/RAD25/XPB helicase, C-terminal domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 CpPa04_RS03015 15f0cba27b0c1a74199fb9b6ff55b25e 549 Pfam PF13625 Helicase conserved C-terminal domain 8 135 3.6E-47 T 10-03-2017 IPR032830 Helicase XPB/Ssl2, N-terminal domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 CpPa04_RS03015 15f0cba27b0c1a74199fb9b6ff55b25e 549 Gene3D G3DSA:3.40.50.300 182 348 5.1E-28 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03015 15f0cba27b0c1a74199fb9b6ff55b25e 549 Gene3D G3DSA:3.40.50.300 386 539 2.7E-12 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS10520 d7cc13c36fae1e82af215308102fff56 215 Gene3D G3DSA:2.70.98.10 12 210 3.2E-36 T 10-03-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 CpPa04_RS10520 d7cc13c36fae1e82af215308102fff56 215 Pfam PF01263 Aldose 1-epimerase 40 146 1.2E-6 T 10-03-2017 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CpPa04_RS10520 d7cc13c36fae1e82af215308102fff56 215 SUPERFAMILY SSF74650 21 210 2.89E-32 T 10-03-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CpPa04_RS04960 bb21e55f166dbecec74d8ecc853e5fca 229 Gene3D G3DSA:3.40.50.300 1 205 6.1E-57 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04960 bb21e55f166dbecec74d8ecc853e5fca 229 PIRSF PIRSF006755 1 225 6.0E-38 T 10-03-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CpPa04_RS04960 bb21e55f166dbecec74d8ecc853e5fca 229 Pfam PF13500 AAA domain 5 205 1.7E-30 T 10-03-2017 CpPa04_RS04960 bb21e55f166dbecec74d8ecc853e5fca 229 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 165 1.3E-33 T 10-03-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CpPa04_RS04960 bb21e55f166dbecec74d8ecc853e5fca 229 SUPERFAMILY SSF52540 1 207 4.31E-40 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04960 bb21e55f166dbecec74d8ecc853e5fca 229 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 199 25.098 T 10-03-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CpPa04_RS08150 2f9b404c835c4bc988aa5839d1340aeb 224 SUPERFAMILY SSF82689 117 213 4.71E-12 T 10-03-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CpPa04_RS08150 2f9b404c835c4bc988aa5839d1340aeb 224 SUPERFAMILY SSF82861 3 51 6.8E-10 T 10-03-2017 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CpPa04_RS08150 2f9b404c835c4bc988aa5839d1340aeb 224 Gene3D G3DSA:2.30.30.60 68 110 2.2E-11 T 10-03-2017 CpPa04_RS08150 2f9b404c835c4bc988aa5839d1340aeb 224 Gene3D G3DSA:3.30.70.100 124 208 4.0E-4 T 10-03-2017 CpPa04_RS08150 2f9b404c835c4bc988aa5839d1340aeb 224 SUPERFAMILY SSF50182 53 110 2.94E-12 T 10-03-2017 IPR010920 LSM domain CpPa04_RS08150 2f9b404c835c4bc988aa5839d1340aeb 224 Pfam PF00924 Mechanosensitive ion channel 11 209 3.2E-38 T 10-03-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CpPa04_RS06150 d8e39e644761d20a1c97fd687ca73c50 517 Pfam PF04545 Sigma-70, region 4 452 505 8.0E-18 T 10-03-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06150 d8e39e644761d20a1c97fd687ca73c50 517 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 111 517 32.314 T 10-03-2017 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 CpPa04_RS06150 d8e39e644761d20a1c97fd687ca73c50 517 Pfam PF04539 Sigma-70 region 3 363 437 2.0E-27 T 10-03-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06150 d8e39e644761d20a1c97fd687ca73c50 517 Gene3D G3DSA:1.10.601.10 123 241 1.2E-58 T 10-03-2017 CpPa04_RS06150 d8e39e644761d20a1c97fd687ca73c50 517 Gene3D G3DSA:1.10.601.10 276 353 1.2E-58 T 10-03-2017 CpPa04_RS06150 d8e39e644761d20a1c97fd687ca73c50 517 Pfam PF04542 Sigma-70 region 2 284 353 2.0E-22 T 10-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06150 d8e39e644761d20a1c97fd687ca73c50 517 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 308 321 - T 10-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06150 d8e39e644761d20a1c97fd687ca73c50 517 Gene3D G3DSA:1.10.10.10 447 517 2.0E-30 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS06150 d8e39e644761d20a1c97fd687ca73c50 517 SUPERFAMILY SSF88946 206 354 2.8E-53 T 10-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06150 d8e39e644761d20a1c97fd687ca73c50 517 Gene3D G3DSA:1.10.10.10 357 408 1.9E-25 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS06150 d8e39e644761d20a1c97fd687ca73c50 517 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 280 516 6.5E-113 T 10-03-2017 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06150 d8e39e644761d20a1c97fd687ca73c50 517 Pfam PF00140 Sigma-70 factor, region 1.2 209 242 6.5E-15 T 10-03-2017 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06150 d8e39e644761d20a1c97fd687ca73c50 517 SUPERFAMILY SSF88659 416 516 2.15E-25 T 10-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06150 d8e39e644761d20a1c97fd687ca73c50 517 PRINTS PR00046 Major sigma-70 factor signature 477 492 8.0E-29 T 10-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06150 d8e39e644761d20a1c97fd687ca73c50 517 PRINTS PR00046 Major sigma-70 factor signature 308 321 8.0E-29 T 10-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06150 d8e39e644761d20a1c97fd687ca73c50 517 PRINTS PR00046 Major sigma-70 factor signature 456 468 8.0E-29 T 10-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06150 d8e39e644761d20a1c97fd687ca73c50 517 PRINTS PR00046 Major sigma-70 factor signature 332 340 8.0E-29 T 10-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06150 d8e39e644761d20a1c97fd687ca73c50 517 PRINTS PR00046 Major sigma-70 factor signature 492 503 8.0E-29 T 10-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06150 d8e39e644761d20a1c97fd687ca73c50 517 SUPERFAMILY SSF88659 357 430 5.79E-22 T 10-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06150 d8e39e644761d20a1c97fd687ca73c50 517 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 477 503 - T 10-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06150 d8e39e644761d20a1c97fd687ca73c50 517 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 280 373 4.6E-22 T 10-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS09305 d5b5e01ec0c374bf390d9d52f64284d2 309 SUPERFAMILY SSF52540 2 219 5.97E-57 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09305 d5b5e01ec0c374bf390d9d52f64284d2 309 Gene3D G3DSA:3.40.50.300 1 220 8.5E-62 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09305 d5b5e01ec0c374bf390d9d52f64284d2 309 SMART SM00382 26 204 2.6E-9 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS09305 d5b5e01ec0c374bf390d9d52f64284d2 309 Pfam PF00005 ABC transporter 18 156 4.8E-26 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS09305 d5b5e01ec0c374bf390d9d52f64284d2 309 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS04300 b42311bf6a266ee5b6b4ad753ec5ae6c 273 Hamap MF_01416 ATP synthase subunit delta [atpD]. 73 273 13.111 T 10-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 CpPa04_RS04300 b42311bf6a266ee5b6b4ad753ec5ae6c 273 Pfam PF00213 ATP synthase delta (OSCP) subunit 109 272 5.1E-34 T 10-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 CpPa04_RS04300 b42311bf6a266ee5b6b4ad753ec5ae6c 273 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 109 272 8.6E-26 T 10-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 CpPa04_RS04300 b42311bf6a266ee5b6b4ad753ec5ae6c 273 PRINTS PR00125 ATP synthase delta subunit signature 247 265 2.6E-10 T 10-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 CpPa04_RS04300 b42311bf6a266ee5b6b4ad753ec5ae6c 273 PRINTS PR00125 ATP synthase delta subunit signature 232 247 2.6E-10 T 10-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 CpPa04_RS04300 b42311bf6a266ee5b6b4ad753ec5ae6c 273 Gene3D G3DSA:1.10.520.20 109 191 9.0E-6 T 10-03-2017 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 CpPa04_RS04300 b42311bf6a266ee5b6b4ad753ec5ae6c 273 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 234 253 - T 10-03-2017 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210 CpPa04_RS10225 584e1707c132933aed654234c1023f17 299 Pfam PF00582 Universal stress protein family 154 294 7.3E-29 T 10-03-2017 IPR006016 UspA GO:0006950 CpPa04_RS10225 584e1707c132933aed654234c1023f17 299 Pfam PF00582 Universal stress protein family 6 143 1.4E-27 T 10-03-2017 IPR006016 UspA GO:0006950 CpPa04_RS10225 584e1707c132933aed654234c1023f17 299 SUPERFAMILY SSF52402 7 147 4.35E-33 T 10-03-2017 CpPa04_RS10225 584e1707c132933aed654234c1023f17 299 PRINTS PR01438 Universal stress protein signature 154 172 6.3E-20 T 10-03-2017 IPR006015 Universal stress protein A CpPa04_RS10225 584e1707c132933aed654234c1023f17 299 PRINTS PR01438 Universal stress protein signature 254 266 6.3E-20 T 10-03-2017 IPR006015 Universal stress protein A CpPa04_RS10225 584e1707c132933aed654234c1023f17 299 PRINTS PR01438 Universal stress protein signature 272 294 6.3E-20 T 10-03-2017 IPR006015 Universal stress protein A CpPa04_RS10225 584e1707c132933aed654234c1023f17 299 SUPERFAMILY SSF52402 154 297 3.18E-34 T 10-03-2017 CpPa04_RS10225 584e1707c132933aed654234c1023f17 299 Gene3D G3DSA:3.40.50.620 7 146 6.3E-35 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS10225 584e1707c132933aed654234c1023f17 299 Gene3D G3DSA:3.40.50.620 151 298 2.6E-37 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS04955 f25cadd696aa30a725f7a6e746271413 432 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 15 423 8.2E-162 T 10-03-2017 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CpPa04_RS04955 f25cadd696aa30a725f7a6e746271413 432 SUPERFAMILY SSF53383 7 424 1.18E-116 T 10-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase CpPa04_RS04955 f25cadd696aa30a725f7a6e746271413 432 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 243 280 - T 10-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CpPa04_RS04955 f25cadd696aa30a725f7a6e746271413 432 Pfam PF00202 Aminotransferase class-III 27 422 3.1E-124 T 10-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CpPa04_RS04955 f25cadd696aa30a725f7a6e746271413 432 PIRSF PIRSF000521 24 425 1.5E-22 T 10-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CpPa04_RS04955 f25cadd696aa30a725f7a6e746271413 432 Gene3D G3DSA:3.90.1150.10 6 63 1.3E-55 T 10-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CpPa04_RS04955 f25cadd696aa30a725f7a6e746271413 432 Gene3D G3DSA:3.90.1150.10 334 424 1.3E-55 T 10-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CpPa04_RS04955 f25cadd696aa30a725f7a6e746271413 432 Gene3D G3DSA:3.40.640.10 64 328 2.4E-78 T 10-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CpPa04_RS06785 a3d46b7f683abfeefa644e9deb0d6ded 285 Gene3D G3DSA:1.10.8.50 144 283 2.2E-41 T 10-03-2017 CpPa04_RS06785 a3d46b7f683abfeefa644e9deb0d6ded 285 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 143 228 1.2E-21 T 10-03-2017 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CpPa04_RS06785 a3d46b7f683abfeefa644e9deb0d6ded 285 ProSitePatterns PS01242 Zinc finger FPG-type signature. 258 282 - T 10-03-2017 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 CpPa04_RS06785 a3d46b7f683abfeefa644e9deb0d6ded 285 SMART SM01232 142 234 1.1E-26 T 10-03-2017 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CpPa04_RS06785 a3d46b7f683abfeefa644e9deb0d6ded 285 SUPERFAMILY SSF46946 143 231 3.01E-21 T 10-03-2017 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CpPa04_RS06785 a3d46b7f683abfeefa644e9deb0d6ded 285 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 282 1.0E-83 T 10-03-2017 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CpPa04_RS06785 a3d46b7f683abfeefa644e9deb0d6ded 285 Pfam PF06827 Zinc finger found in FPG and IleRS 257 282 2.5E-10 T 10-03-2017 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CpPa04_RS06785 a3d46b7f683abfeefa644e9deb0d6ded 285 SUPERFAMILY SSF81624 2 125 9.68E-34 T 10-03-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CpPa04_RS06785 a3d46b7f683abfeefa644e9deb0d6ded 285 Gene3D G3DSA:3.20.190.10 2 127 4.6E-37 T 10-03-2017 CpPa04_RS06785 a3d46b7f683abfeefa644e9deb0d6ded 285 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 283 37.579 T 10-03-2017 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CpPa04_RS06785 a3d46b7f683abfeefa644e9deb0d6ded 285 SUPERFAMILY SSF57716 234 282 1.91E-15 T 10-03-2017 CpPa04_RS06785 a3d46b7f683abfeefa644e9deb0d6ded 285 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 2 122 4.4E-33 T 10-03-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CpPa04_RS06785 a3d46b7f683abfeefa644e9deb0d6ded 285 SMART SM00898 2 123 8.2E-45 T 10-03-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CpPa04_RS08435 0f8d26b8edde0f0673872758413d54a1 419 Gene3D G3DSA:3.40.50.1000 257 386 4.0E-47 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS08435 0f8d26b8edde0f0673872758413d54a1 419 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 183 398 1.2E-78 T 10-03-2017 CpPa04_RS08435 0f8d26b8edde0f0673872758413d54a1 419 Gene3D G3DSA:1.10.150.210 205 256 5.7E-24 T 10-03-2017 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 CpPa04_RS08435 0f8d26b8edde0f0673872758413d54a1 419 Pfam PF13740 ACT domain 21 91 1.5E-11 T 10-03-2017 CpPa04_RS08435 0f8d26b8edde0f0673872758413d54a1 419 Pfam PF12710 haloacid dehalogenase-like hydrolase 196 362 2.0E-25 T 10-03-2017 CpPa04_RS08435 0f8d26b8edde0f0673872758413d54a1 419 SUPERFAMILY SSF55021 20 93 1.99E-7 T 10-03-2017 CpPa04_RS08435 0f8d26b8edde0f0673872758413d54a1 419 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 195 365 1.6E-35 T 10-03-2017 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 CpPa04_RS08435 0f8d26b8edde0f0673872758413d54a1 419 Gene3D G3DSA:3.30.70.260 122 195 8.1E-8 T 10-03-2017 CpPa04_RS08435 0f8d26b8edde0f0673872758413d54a1 419 Gene3D G3DSA:3.30.70.260 19 96 6.1E-12 T 10-03-2017 CpPa04_RS08435 0f8d26b8edde0f0673872758413d54a1 419 SUPERFAMILY SSF56784 193 402 1.73E-53 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS01715 4159b7c17ddce971a5e9f76fc2989d24 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 2.1E-67 T 10-03-2017 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS01715 4159b7c17ddce971a5e9f76fc2989d24 123 SUPERFAMILY SSF50249 2 122 2.57E-51 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS01715 4159b7c17ddce971a5e9f76fc2989d24 123 Pfam PF00164 Ribosomal protein S12/S23 3 123 7.1E-43 T 10-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01715 4159b7c17ddce971a5e9f76fc2989d24 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 10-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01715 4159b7c17ddce971a5e9f76fc2989d24 123 PIRSF PIRSF002133 1 123 1.1E-53 T 10-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01715 4159b7c17ddce971a5e9f76fc2989d24 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.249 T 10-03-2017 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS01715 4159b7c17ddce971a5e9f76fc2989d24 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 6.9E-59 T 10-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01715 4159b7c17ddce971a5e9f76fc2989d24 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 6.9E-59 T 10-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01715 4159b7c17ddce971a5e9f76fc2989d24 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 6.9E-59 T 10-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01715 4159b7c17ddce971a5e9f76fc2989d24 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 6.9E-59 T 10-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01715 4159b7c17ddce971a5e9f76fc2989d24 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 6.9E-59 T 10-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01715 4159b7c17ddce971a5e9f76fc2989d24 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 6.9E-59 T 10-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01715 4159b7c17ddce971a5e9f76fc2989d24 123 Gene3D G3DSA:2.40.50.140 1 123 3.9E-64 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS09025 218e38b28cae4e5e7968d9a0e7e85088 885 SUPERFAMILY SSF81923 3 144 8.73E-32 T 10-03-2017 IPR004176 Clp, N-terminal GO:0019538 CpPa04_RS09025 218e38b28cae4e5e7968d9a0e7e85088 885 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 608 626 1.5E-38 T 10-03-2017 IPR001270 ClpA/B family GO:0005524 CpPa04_RS09025 218e38b28cae4e5e7968d9a0e7e85088 885 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 670 684 1.5E-38 T 10-03-2017 IPR001270 ClpA/B family GO:0005524 CpPa04_RS09025 218e38b28cae4e5e7968d9a0e7e85088 885 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 637 655 1.5E-38 T 10-03-2017 IPR001270 ClpA/B family GO:0005524 CpPa04_RS09025 218e38b28cae4e5e7968d9a0e7e85088 885 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 563 581 1.5E-38 T 10-03-2017 IPR001270 ClpA/B family GO:0005524 CpPa04_RS09025 218e38b28cae4e5e7968d9a0e7e85088 885 Gene3D G3DSA:3.40.50.300 722 750 1.7E-52 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09025 218e38b28cae4e5e7968d9a0e7e85088 885 Gene3D G3DSA:3.40.50.300 512 685 1.7E-52 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09025 218e38b28cae4e5e7968d9a0e7e85088 885 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 227 343 7.3E-12 T 10-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 CpPa04_RS09025 218e38b28cae4e5e7968d9a0e7e85088 885 Gene3D G3DSA:1.10.1780.10 1 142 3.8E-50 T 10-03-2017 IPR004176 Clp, N-terminal GO:0019538 CpPa04_RS09025 218e38b28cae4e5e7968d9a0e7e85088 885 Gene3D G3DSA:1.10.8.60 751 823 8.6E-29 T 10-03-2017 CpPa04_RS09025 218e38b28cae4e5e7968d9a0e7e85088 885 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 68 8.8E-20 T 10-03-2017 IPR004176 Clp, N-terminal GO:0019538 CpPa04_RS09025 218e38b28cae4e5e7968d9a0e7e85088 885 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 142 1.0E-13 T 10-03-2017 IPR004176 Clp, N-terminal GO:0019538 CpPa04_RS09025 218e38b28cae4e5e7968d9a0e7e85088 885 Gene3D G3DSA:1.10.8.60 366 450 4.0E-35 T 10-03-2017 CpPa04_RS09025 218e38b28cae4e5e7968d9a0e7e85088 885 SUPERFAMILY SSF52540 508 824 4.64E-77 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09025 218e38b28cae4e5e7968d9a0e7e85088 885 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 317 329 - T 10-03-2017 IPR018368 ClpA/B, conserved site 1 GO:0005524 CpPa04_RS09025 218e38b28cae4e5e7968d9a0e7e85088 885 SMART SM00382 559 740 4.0E-10 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS09025 218e38b28cae4e5e7968d9a0e7e85088 885 SMART SM00382 222 366 1.1E-8 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS09025 218e38b28cae4e5e7968d9a0e7e85088 885 SUPERFAMILY SSF52540 185 484 3.11E-74 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09025 218e38b28cae4e5e7968d9a0e7e85088 885 SMART SM01086 739 830 1.0E-32 T 10-03-2017 IPR019489 Clp ATPase, C-terminal CpPa04_RS09025 218e38b28cae4e5e7968d9a0e7e85088 885 Gene3D G3DSA:3.40.50.300 185 365 1.5E-46 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09025 218e38b28cae4e5e7968d9a0e7e85088 885 Pfam PF07724 AAA domain (Cdc48 subfamily) 558 733 1.9E-49 T 10-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 CpPa04_RS09025 218e38b28cae4e5e7968d9a0e7e85088 885 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 739 819 2.3E-23 T 10-03-2017 IPR019489 Clp ATPase, C-terminal CpPa04_RS09025 218e38b28cae4e5e7968d9a0e7e85088 885 Pfam PF02151 UvrB/uvrC motif 440 473 1.4E-7 T 10-03-2017 IPR001943 UVR domain GO:0005515 CpPa04_RS09265 49a95198f305517b1ce09a669e4f7967 372 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 12 298 1.1E-108 T 10-03-2017 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CpPa04_RS09265 49a95198f305517b1ce09a669e4f7967 372 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 13 292 7.5E-65 T 10-03-2017 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CpPa04_RS09265 49a95198f305517b1ce09a669e4f7967 372 SUPERFAMILY SSF55931 4 368 3.43E-114 T 10-03-2017 CpPa04_RS09265 49a95198f305517b1ce09a669e4f7967 372 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 372 93.644 T 10-03-2017 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CpPa04_RS05790 45baa6c0398f9181a538328cd281d8b4 363 SUPERFAMILY SSF55920 91 358 5.23E-76 T 10-03-2017 IPR000994 Peptidase M24, structural domain CpPa04_RS05790 45baa6c0398f9181a538328cd281d8b4 363 Gene3D G3DSA:3.90.230.10 136 360 2.0E-76 T 10-03-2017 IPR000994 Peptidase M24, structural domain CpPa04_RS05790 45baa6c0398f9181a538328cd281d8b4 363 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 293 305 - T 10-03-2017 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CpPa04_RS05790 45baa6c0398f9181a538328cd281d8b4 363 Pfam PF01321 Creatinase/Prolidase N-terminal domain 11 134 2.4E-20 T 10-03-2017 IPR000587 Creatinase, N-terminal GO:0016787 CpPa04_RS05790 45baa6c0398f9181a538328cd281d8b4 363 Gene3D G3DSA:3.40.350.10 1 133 2.9E-23 T 10-03-2017 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CpPa04_RS05790 45baa6c0398f9181a538328cd281d8b4 363 Pfam PF00557 Metallopeptidase family M24 143 346 1.6E-62 T 10-03-2017 IPR000994 Peptidase M24, structural domain CpPa04_RS05790 45baa6c0398f9181a538328cd281d8b4 363 SUPERFAMILY SSF53092 3 134 5.23E-24 T 10-03-2017 IPR028980 Creatinase/Aminopeptidase P, N-terminal CpPa04_RS02185 7d26dd24ddb8aad09587da9f524774ba 525 Pfam PF00958 GMP synthase C terminal domain 433 524 4.9E-38 T 10-03-2017 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CpPa04_RS02185 7d26dd24ddb8aad09587da9f524774ba 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 12 197 5.7E-72 T 10-03-2017 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CpPa04_RS02185 7d26dd24ddb8aad09587da9f524774ba 525 Gene3D G3DSA:3.40.50.880 8 196 4.5E-60 T 10-03-2017 IPR029062 Class I glutamine amidotransferase-like CpPa04_RS02185 7d26dd24ddb8aad09587da9f524774ba 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 9 525 52.0 T 10-03-2017 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 CpPa04_RS02185 7d26dd24ddb8aad09587da9f524774ba 525 Pfam PF00117 Glutamine amidotransferase class-I 14 192 1.6E-38 T 10-03-2017 IPR017926 Glutamine amidotransferase CpPa04_RS02185 7d26dd24ddb8aad09587da9f524774ba 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 525 1.0E-137 T 10-03-2017 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CpPa04_RS02185 7d26dd24ddb8aad09587da9f524774ba 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 53 67 3.7E-5 T 10-03-2017 CpPa04_RS02185 7d26dd24ddb8aad09587da9f524774ba 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 83 99 3.7E-5 T 10-03-2017 CpPa04_RS02185 7d26dd24ddb8aad09587da9f524774ba 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 12 26 3.7E-5 T 10-03-2017 CpPa04_RS02185 7d26dd24ddb8aad09587da9f524774ba 525 SUPERFAMILY SSF52402 190 418 3.96E-52 T 10-03-2017 CpPa04_RS02185 7d26dd24ddb8aad09587da9f524774ba 525 SUPERFAMILY SSF54810 404 525 1.7E-46 T 10-03-2017 CpPa04_RS02185 7d26dd24ddb8aad09587da9f524774ba 525 SUPERFAMILY SSF52317 5 231 8.58E-52 T 10-03-2017 IPR029062 Class I glutamine amidotransferase-like CpPa04_RS02185 7d26dd24ddb8aad09587da9f524774ba 525 Gene3D G3DSA:3.30.300.10 400 525 8.0E-48 T 10-03-2017 CpPa04_RS02185 7d26dd24ddb8aad09587da9f524774ba 525 PRINTS PR00097 Anthranilate synthase component II signature 83 94 1.6E-6 T 10-03-2017 CpPa04_RS02185 7d26dd24ddb8aad09587da9f524774ba 525 PRINTS PR00097 Anthranilate synthase component II signature 56 65 1.6E-6 T 10-03-2017 CpPa04_RS02185 7d26dd24ddb8aad09587da9f524774ba 525 PRINTS PR00097 Anthranilate synthase component II signature 170 183 1.6E-6 T 10-03-2017 CpPa04_RS02185 7d26dd24ddb8aad09587da9f524774ba 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 56 65 2.0E-8 T 10-03-2017 CpPa04_RS02185 7d26dd24ddb8aad09587da9f524774ba 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 83 94 2.0E-8 T 10-03-2017 CpPa04_RS02185 7d26dd24ddb8aad09587da9f524774ba 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 170 183 2.0E-8 T 10-03-2017 CpPa04_RS02185 7d26dd24ddb8aad09587da9f524774ba 525 Gene3D G3DSA:3.40.50.620 201 399 2.8E-51 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS02185 7d26dd24ddb8aad09587da9f524774ba 525 Pfam PF02540 NAD synthase 215 248 4.0E-5 T 10-03-2017 IPR022310 NAD/GMP synthase CpPa04_RS00110 f4c0480a008380538a2b50199f89ab70 256 Gene3D G3DSA:1.20.1540.10 20 198 1.2E-33 T 10-03-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CpPa04_RS00110 f4c0480a008380538a2b50199f89ab70 256 SUPERFAMILY SSF144091 18 204 4.97E-34 T 10-03-2017 CpPa04_RS00110 f4c0480a008380538a2b50199f89ab70 256 Pfam PF01694 Rhomboid family 71 200 4.5E-29 T 10-03-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CpPa04_RS04415 894113d948386e11efb96a290e32c3a9 678 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 408 435 2.6E-9 T 10-03-2017 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 CpPa04_RS04415 894113d948386e11efb96a290e32c3a9 678 Hamap MF_01588 DNA ligase [ligA]. 6 673 48.753 T 10-03-2017 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CpPa04_RS04415 894113d948386e11efb96a290e32c3a9 678 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 10-03-2017 IPR033136 NAD-dependent DNA ligase, conserved site CpPa04_RS04415 894113d948386e11efb96a290e32c3a9 678 PIRSF PIRSF001604 2 678 1.7E-227 T 10-03-2017 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CpPa04_RS04415 894113d948386e11efb96a290e32c3a9 678 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 113 142 - T 10-03-2017 IPR018239 NAD-dependent DNA ligase, active site CpPa04_RS04415 894113d948386e11efb96a290e32c3a9 678 SMART SM00532 7 449 1.1E-237 T 10-03-2017 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 CpPa04_RS04415 894113d948386e11efb96a290e32c3a9 678 Gene3D G3DSA:1.10.150.20 511 591 5.8E-25 T 10-03-2017 CpPa04_RS04415 894113d948386e11efb96a290e32c3a9 678 SUPERFAMILY SSF47781 403 590 4.82E-48 T 10-03-2017 IPR010994 RuvA domain 2-like CpPa04_RS04415 894113d948386e11efb96a290e32c3a9 678 Pfam PF12826 Helix-hairpin-helix motif 517 580 5.8E-22 T 10-03-2017 CpPa04_RS04415 894113d948386e11efb96a290e32c3a9 678 SMART SM00292 599 676 2.4E-12 T 10-03-2017 IPR001357 BRCT domain CpPa04_RS04415 894113d948386e11efb96a290e32c3a9 678 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 8 318 9.6E-111 T 10-03-2017 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 CpPa04_RS04415 894113d948386e11efb96a290e32c3a9 678 Gene3D G3DSA:3.40.50.10190 598 676 1.6E-23 T 10-03-2017 IPR001357 BRCT domain CpPa04_RS04415 894113d948386e11efb96a290e32c3a9 678 SUPERFAMILY SSF50249 317 400 7.71E-26 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS04415 894113d948386e11efb96a290e32c3a9 678 Gene3D G3DSA:3.30.470.30 117 252 4.6E-48 T 10-03-2017 CpPa04_RS04415 894113d948386e11efb96a290e32c3a9 678 SUPERFAMILY SSF52113 596 676 2.06E-18 T 10-03-2017 IPR001357 BRCT domain CpPa04_RS04415 894113d948386e11efb96a290e32c3a9 678 SUPERFAMILY SSF56091 7 318 9.87E-105 T 10-03-2017 CpPa04_RS04415 894113d948386e11efb96a290e32c3a9 678 Gene3D G3DSA:1.10.150.20 436 493 2.3E-12 T 10-03-2017 CpPa04_RS04415 894113d948386e11efb96a290e32c3a9 678 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 321 398 9.9E-31 T 10-03-2017 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 CpPa04_RS04415 894113d948386e11efb96a290e32c3a9 678 Gene3D G3DSA:1.10.287.610 7 69 1.5E-23 T 10-03-2017 CpPa04_RS04415 894113d948386e11efb96a290e32c3a9 678 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 15 668 2.9E-226 T 10-03-2017 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CpPa04_RS04415 894113d948386e11efb96a290e32c3a9 678 Gene3D G3DSA:2.40.50.140 320 390 6.1E-29 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS04415 894113d948386e11efb96a290e32c3a9 678 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 602 672 5.3E-11 T 10-03-2017 IPR001357 BRCT domain CpPa04_RS00770 c3a6ebd63acce72870cc8774cab443e3 218 SMART SM00493 79 184 2.0E-10 T 10-03-2017 IPR006171 Toprim domain CpPa04_RS00770 c3a6ebd63acce72870cc8774cab443e3 218 Pfam PF13662 Toprim domain 80 191 5.3E-19 T 10-03-2017 IPR006171 Toprim domain CpPa04_RS00770 c3a6ebd63acce72870cc8774cab443e3 218 ProSitePatterns PS01300 RecR protein signature. 56 77 - T 10-03-2017 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 CpPa04_RS00770 c3a6ebd63acce72870cc8774cab443e3 218 SUPERFAMILY SSF111304 3 218 4.45E-65 T 10-03-2017 IPR023627 Recombination protein RecR CpPa04_RS00770 c3a6ebd63acce72870cc8774cab443e3 218 Pfam PF02132 RecR protein 39 77 7.7E-12 T 10-03-2017 IPR023628 Recombination protein RecR, C4-type zinc finger CpPa04_RS00770 c3a6ebd63acce72870cc8774cab443e3 218 Gene3D G3DSA:3.40.50.140 147 189 5.8E-5 T 10-03-2017 IPR006171 Toprim domain CpPa04_RS00770 c3a6ebd63acce72870cc8774cab443e3 218 SMART SM00278 11 30 0.0025 T 10-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CpPa04_RS00770 c3a6ebd63acce72870cc8774cab443e3 218 Hamap MF_00017 Recombination protein RecR [recR]. 1 218 92.525 T 10-03-2017 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CpPa04_RS07925 c0fd805825cc1278d2d5474e1ef25a52 235 Pfam PF00005 ABC transporter 19 160 8.6E-24 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS07925 c0fd805825cc1278d2d5474e1ef25a52 235 SMART SM00382 27 206 3.9E-11 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS07925 c0fd805825cc1278d2d5474e1ef25a52 235 Gene3D G3DSA:3.40.50.300 18 229 4.1E-54 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07925 c0fd805825cc1278d2d5474e1ef25a52 235 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS07925 c0fd805825cc1278d2d5474e1ef25a52 235 SUPERFAMILY SSF52540 18 219 2.43E-48 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06885 ab1f90f64f67984545d7eefcb145f671 260 Gene3D G3DSA:3.30.540.10 3 144 2.6E-29 T 10-03-2017 CpPa04_RS06885 ab1f90f64f67984545d7eefcb145f671 260 SUPERFAMILY SSF56655 4 258 4.84E-55 T 10-03-2017 CpPa04_RS06885 ab1f90f64f67984545d7eefcb145f671 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 176 197 1.7E-21 T 10-03-2017 IPR000760 Inositol monophosphatase GO:0046854 CpPa04_RS06885 ab1f90f64f67984545d7eefcb145f671 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.7E-21 T 10-03-2017 IPR000760 Inositol monophosphatase GO:0046854 CpPa04_RS06885 ab1f90f64f67984545d7eefcb145f671 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 77 93 1.7E-21 T 10-03-2017 IPR000760 Inositol monophosphatase GO:0046854 CpPa04_RS06885 ab1f90f64f67984545d7eefcb145f671 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 207 231 1.7E-21 T 10-03-2017 IPR000760 Inositol monophosphatase GO:0046854 CpPa04_RS06885 ab1f90f64f67984545d7eefcb145f671 260 Gene3D G3DSA:3.40.190.80 165 258 9.1E-22 T 10-03-2017 CpPa04_RS06885 ab1f90f64f67984545d7eefcb145f671 260 Pfam PF00459 Inositol monophosphatase family 34 256 3.9E-43 T 10-03-2017 IPR000760 Inositol monophosphatase GO:0046854 CpPa04_RS08070 53d59fde4126fa30008d1e0abfeac6b8 911 SUPERFAMILY SSF50677 207 355 3.4E-49 T 10-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CpPa04_RS08070 53d59fde4126fa30008d1e0abfeac6b8 911 PRINTS PR00986 Valyl-tRNA synthetase signature 364 377 1.4E-36 T 10-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CpPa04_RS08070 53d59fde4126fa30008d1e0abfeac6b8 911 PRINTS PR00986 Valyl-tRNA synthetase signature 492 510 1.4E-36 T 10-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CpPa04_RS08070 53d59fde4126fa30008d1e0abfeac6b8 911 PRINTS PR00986 Valyl-tRNA synthetase signature 247 264 1.4E-36 T 10-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CpPa04_RS08070 53d59fde4126fa30008d1e0abfeac6b8 911 PRINTS PR00986 Valyl-tRNA synthetase signature 51 62 1.4E-36 T 10-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CpPa04_RS08070 53d59fde4126fa30008d1e0abfeac6b8 911 PRINTS PR00986 Valyl-tRNA synthetase signature 461 482 1.4E-36 T 10-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CpPa04_RS08070 53d59fde4126fa30008d1e0abfeac6b8 911 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 10-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS08070 53d59fde4126fa30008d1e0abfeac6b8 911 Pfam PF08264 Anticodon-binding domain of tRNA 635 790 5.8E-34 T 10-03-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CpPa04_RS08070 53d59fde4126fa30008d1e0abfeac6b8 911 Gene3D G3DSA:1.10.287.380 842 909 1.8E-5 T 10-03-2017 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 CpPa04_RS08070 53d59fde4126fa30008d1e0abfeac6b8 911 SUPERFAMILY SSF52374 359 604 4.83E-131 T 10-03-2017 CpPa04_RS08070 53d59fde4126fa30008d1e0abfeac6b8 911 SUPERFAMILY SSF52374 18 208 4.83E-131 T 10-03-2017 CpPa04_RS08070 53d59fde4126fa30008d1e0abfeac6b8 911 Gene3D G3DSA:1.10.730.10 546 782 2.7E-65 T 10-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS08070 53d59fde4126fa30008d1e0abfeac6b8 911 SUPERFAMILY SSF47323 607 859 9.35E-44 T 10-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS08070 53d59fde4126fa30008d1e0abfeac6b8 911 Hamap MF_02004 Valine--tRNA ligase [valS]. 17 911 14.75 T 10-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CpPa04_RS08070 53d59fde4126fa30008d1e0abfeac6b8 911 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 849 910 2.5E-15 T 10-03-2017 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 CpPa04_RS08070 53d59fde4126fa30008d1e0abfeac6b8 911 Gene3D G3DSA:3.90.740.10 179 361 3.6E-55 T 10-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CpPa04_RS08070 53d59fde4126fa30008d1e0abfeac6b8 911 TIGRFAM TIGR00422 valS: valine--tRNA ligase 19 891 5.3E-298 T 10-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CpPa04_RS08070 53d59fde4126fa30008d1e0abfeac6b8 911 Gene3D G3DSA:3.40.50.620 40 178 9.9E-104 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS08070 53d59fde4126fa30008d1e0abfeac6b8 911 Gene3D G3DSA:3.40.50.620 364 545 9.9E-104 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS08070 53d59fde4126fa30008d1e0abfeac6b8 911 SUPERFAMILY SSF46589 846 910 8.89E-13 T 10-03-2017 IPR010978 tRNA-binding arm GO:0000166 CpPa04_RS08070 53d59fde4126fa30008d1e0abfeac6b8 911 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 30 589 1.1E-188 T 10-03-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS06110 61a5b30b6a7630a791db69686a6921d7 439 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 361 431 1.5E-6 T 10-03-2017 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CpPa04_RS06110 61a5b30b6a7630a791db69686a6921d7 439 SUPERFAMILY SSF53335 81 433 9.36E-29 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS06110 61a5b30b6a7630a791db69686a6921d7 439 Gene3D G3DSA:2.40.50.140 13 88 3.6E-23 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS06110 61a5b30b6a7630a791db69686a6921d7 439 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 364 395 - T 10-03-2017 IPR030390 RNA methyltransferase TrmA, active site CpPa04_RS06110 61a5b30b6a7630a791db69686a6921d7 439 Gene3D G3DSA:3.40.50.150 228 432 7.2E-32 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS06110 61a5b30b6a7630a791db69686a6921d7 439 SUPERFAMILY SSF50249 12 71 2.66E-15 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS06110 61a5b30b6a7630a791db69686a6921d7 439 Pfam PF01938 TRAM domain 18 71 9.4E-12 T 10-03-2017 IPR002792 TRAM domain CpPa04_RS01850 c3c76896cb1224379c43069f86f227d8 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 3.7E-56 T 10-03-2017 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 CpPa04_RS01850 c3c76896cb1224379c43069f86f227d8 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 10-03-2017 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01850 c3c76896cb1224379c43069f86f227d8 122 Gene3D G3DSA:2.40.150.20 2 122 5.9E-54 T 10-03-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CpPa04_RS01850 c3c76896cb1224379c43069f86f227d8 122 SMART SM01374 1 122 1.2E-85 T 10-03-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CpPa04_RS01850 c3c76896cb1224379c43069f86f227d8 122 SUPERFAMILY SSF50193 2 122 3.79E-50 T 10-03-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CpPa04_RS01850 c3c76896cb1224379c43069f86f227d8 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.39 T 10-03-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CpPa04_RS01850 c3c76896cb1224379c43069f86f227d8 122 Pfam PF00238 Ribosomal protein L14p/L23e 2 122 3.7E-54 T 10-03-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CpPa04_RS08795 4d51fb94a45d6f653e5c3232406b468e 225 Pfam PF03006 Haemolysin-III related 17 216 4.4E-34 T 10-03-2017 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 CpPa04_RS08795 4d51fb94a45d6f653e5c3232406b468e 225 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 18 223 4.2E-54 T 10-03-2017 IPR005744 Hly-III GO:0016021|GO:0019835 CpPa04_RS00470 ed8de8b2d6168a995e9072359aad453b 509 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 368 388 - T 10-03-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CpPa04_RS00470 ed8de8b2d6168a995e9072359aad453b 509 Hamap MF_00186 Glycerol kinase [glpK]. 1 503 54.805 T 10-03-2017 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CpPa04_RS00470 ed8de8b2d6168a995e9072359aad453b 509 PIRSF PIRSF000538 1 508 9.8E-168 T 10-03-2017 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CpPa04_RS00470 ed8de8b2d6168a995e9072359aad453b 509 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 257 3.3E-75 T 10-03-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CpPa04_RS00470 ed8de8b2d6168a995e9072359aad453b 509 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 2 502 2.8E-220 T 10-03-2017 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CpPa04_RS00470 ed8de8b2d6168a995e9072359aad453b 509 Gene3D G3DSA:3.30.420.40 259 504 2.3E-98 T 10-03-2017 CpPa04_RS00470 ed8de8b2d6168a995e9072359aad453b 509 Gene3D G3DSA:3.30.420.40 1 258 7.8E-103 T 10-03-2017 CpPa04_RS00470 ed8de8b2d6168a995e9072359aad453b 509 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 266 456 9.8E-62 T 10-03-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CpPa04_RS00470 ed8de8b2d6168a995e9072359aad453b 509 SUPERFAMILY SSF53067 3 260 6.79E-92 T 10-03-2017 CpPa04_RS00470 ed8de8b2d6168a995e9072359aad453b 509 SUPERFAMILY SSF53067 259 503 1.76E-80 T 10-03-2017 CpPa04_RS05490 e145a400c6ab80d42b6ff67eae2cb0a0 192 Gene3D G3DSA:1.10.357.10 11 184 1.8E-31 T 10-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CpPa04_RS05490 e145a400c6ab80d42b6ff67eae2cb0a0 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.4E-8 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS05490 e145a400c6ab80d42b6ff67eae2cb0a0 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.4E-8 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS05490 e145a400c6ab80d42b6ff67eae2cb0a0 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 3.0E-16 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS05490 e145a400c6ab80d42b6ff67eae2cb0a0 192 SUPERFAMILY SSF46689 11 75 7.18E-18 T 10-03-2017 IPR009057 Homeodomain-like GO:0003677 CpPa04_RS05490 e145a400c6ab80d42b6ff67eae2cb0a0 192 SUPERFAMILY SSF48498 80 186 4.45E-8 T 10-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CpPa04_RS04835 55b639f53714bff88d821579eb6812e0 416 Gene3D G3DSA:3.40.640.10 69 306 6.4E-88 T 10-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CpPa04_RS04835 55b639f53714bff88d821579eb6812e0 416 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 26 408 8.6E-136 T 10-03-2017 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CpPa04_RS04835 55b639f53714bff88d821579eb6812e0 416 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 23 409 42.486 T 10-03-2017 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CpPa04_RS04835 55b639f53714bff88d821579eb6812e0 416 Gene3D G3DSA:3.90.1150.10 307 409 9.7E-32 T 10-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CpPa04_RS04835 55b639f53714bff88d821579eb6812e0 416 Pfam PF00202 Aminotransferase class-III 35 408 1.2E-107 T 10-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CpPa04_RS04835 55b639f53714bff88d821579eb6812e0 416 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 10-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CpPa04_RS04835 55b639f53714bff88d821579eb6812e0 416 SUPERFAMILY SSF53383 21 409 5.36E-116 T 10-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase CpPa04_RS07725 b47be19a5a39f86b3c212db47101dd77 245 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 188 205 - T 10-03-2017 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 CpPa04_RS07725 b47be19a5a39f86b3c212db47101dd77 245 Gene3D G3DSA:3.40.1180.10 13 244 2.8E-88 T 10-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CpPa04_RS07725 b47be19a5a39f86b3c212db47101dd77 245 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 15 242 1.7E-71 T 10-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CpPa04_RS07725 b47be19a5a39f86b3c212db47101dd77 245 SUPERFAMILY SSF64005 11 237 7.46E-82 T 10-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CpPa04_RS07725 b47be19a5a39f86b3c212db47101dd77 245 Pfam PF01255 Putative undecaprenyl diphosphate synthase 22 242 3.5E-72 T 10-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CpPa04_RS07725 b47be19a5a39f86b3c212db47101dd77 245 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 15 243 36.49 T 10-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CpPa04_RS10200 d780d007edea66d2c195c006cb850125 295 SUPERFAMILY SSF63817 59 278 5.3E-40 T 10-03-2017 IPR023365 Sortase domain CpPa04_RS10200 d780d007edea66d2c195c006cb850125 295 Gene3D G3DSA:2.40.260.10 243 279 8.1E-20 T 10-03-2017 IPR023365 Sortase domain CpPa04_RS10200 d780d007edea66d2c195c006cb850125 295 Gene3D G3DSA:2.40.260.10 103 197 8.1E-20 T 10-03-2017 IPR023365 Sortase domain CpPa04_RS10200 d780d007edea66d2c195c006cb850125 295 Pfam PF04203 Sortase family 109 276 1.2E-32 T 10-03-2017 IPR005754 Sortase family CpPa04_RS09710 d7a0f22f4b38b3b0b34b653dfbd94b82 887 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 377 388 - T 10-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CpPa04_RS09710 d7a0f22f4b38b3b0b34b653dfbd94b82 887 Gene3D G3DSA:1.10.1060.10 271 405 3.1E-26 T 10-03-2017 CpPa04_RS09710 d7a0f22f4b38b3b0b34b653dfbd94b82 887 Pfam PF13237 4Fe-4S dicluster domain 296 388 6.4E-13 T 10-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CpPa04_RS09710 d7a0f22f4b38b3b0b34b653dfbd94b82 887 Pfam PF02754 Cysteine-rich domain 465 557 6.3E-16 T 10-03-2017 IPR004017 Cysteine-rich domain CpPa04_RS09710 d7a0f22f4b38b3b0b34b653dfbd94b82 887 Pfam PF02754 Cysteine-rich domain 598 684 1.3E-12 T 10-03-2017 IPR004017 Cysteine-rich domain CpPa04_RS09710 d7a0f22f4b38b3b0b34b653dfbd94b82 887 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 303 314 - T 10-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CpPa04_RS09710 d7a0f22f4b38b3b0b34b653dfbd94b82 887 SUPERFAMILY SSF46548 289 405 3.84E-19 T 10-03-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 CpPa04_RS08010 11be7567731b892f26a2540b59034fd7 148 Pfam PF04304 Protein of unknown function (DUF454) 35 146 1.3E-36 T 10-03-2017 IPR007401 Protein of unknown function DUF454 CpPa04_RS00010 5e1f6e94f1c71e195abdb08815f70169 395 SMART SM00480 22 374 2.2E-96 T 10-03-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CpPa04_RS00010 5e1f6e94f1c71e195abdb08815f70169 395 SUPERFAMILY SSF55979 132 258 3.28E-16 T 10-03-2017 CpPa04_RS00010 5e1f6e94f1c71e195abdb08815f70169 395 SUPERFAMILY SSF55979 7 122 1.48E-20 T 10-03-2017 CpPa04_RS00010 5e1f6e94f1c71e195abdb08815f70169 395 Pfam PF02767 DNA polymerase III beta subunit, central domain 132 255 1.3E-27 T 10-03-2017 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CpPa04_RS00010 5e1f6e94f1c71e195abdb08815f70169 395 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 259 363 1.6E-25 T 10-03-2017 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CpPa04_RS00010 5e1f6e94f1c71e195abdb08815f70169 395 Gene3D G3DSA:3.10.150.10 130 259 2.3E-28 T 10-03-2017 CpPa04_RS00010 5e1f6e94f1c71e195abdb08815f70169 395 Gene3D G3DSA:3.10.150.10 5 125 1.1E-26 T 10-03-2017 CpPa04_RS00010 5e1f6e94f1c71e195abdb08815f70169 395 Gene3D G3DSA:3.10.150.10 261 394 6.5E-37 T 10-03-2017 CpPa04_RS00010 5e1f6e94f1c71e195abdb08815f70169 395 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 7 393 1.8E-84 T 10-03-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CpPa04_RS00010 5e1f6e94f1c71e195abdb08815f70169 395 PIRSF PIRSF000804 6 394 2.3E-82 T 10-03-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CpPa04_RS00010 5e1f6e94f1c71e195abdb08815f70169 395 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 7 123 1.4E-29 T 10-03-2017 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CpPa04_RS00010 5e1f6e94f1c71e195abdb08815f70169 395 SUPERFAMILY SSF55979 258 393 4.4E-26 T 10-03-2017 CpPa04_RS08860 090ca529f52303addc5fc8bb9f388780 205 Gene3D G3DSA:3.40.50.1820 24 197 1.6E-27 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS08860 090ca529f52303addc5fc8bb9f388780 205 SUPERFAMILY SSF53474 21 189 1.08E-26 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS08860 090ca529f52303addc5fc8bb9f388780 205 Pfam PF12146 Serine aminopeptidase, S33 27 140 4.9E-9 T 10-03-2017 IPR022742 Serine aminopeptidase, S33 CpPa04_RS00950 efd90c549fb10d2fbc2b5b1bc38d86c9 233 Pfam PF00072 Response regulator receiver domain 6 116 5.2E-29 T 10-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CpPa04_RS00950 efd90c549fb10d2fbc2b5b1bc38d86c9 233 SMART SM00862 153 230 6.8E-17 T 10-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CpPa04_RS00950 efd90c549fb10d2fbc2b5b1bc38d86c9 233 SUPERFAMILY SSF52172 2 131 1.25E-41 T 10-03-2017 IPR011006 CheY-like superfamily CpPa04_RS00950 efd90c549fb10d2fbc2b5b1bc38d86c9 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 230 2.1E-17 T 10-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CpPa04_RS00950 efd90c549fb10d2fbc2b5b1bc38d86c9 233 Gene3D G3DSA:1.10.10.10 130 231 3.0E-23 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS00950 efd90c549fb10d2fbc2b5b1bc38d86c9 233 SUPERFAMILY SSF46894 135 230 1.11E-19 T 10-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CpPa04_RS00950 efd90c549fb10d2fbc2b5b1bc38d86c9 233 SMART SM00448 4 117 1.8E-41 T 10-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CpPa04_RS00950 efd90c549fb10d2fbc2b5b1bc38d86c9 233 Gene3D G3DSA:3.40.50.2300 3 124 9.1E-40 T 10-03-2017 CpPa04_RS10035 bfa945ff4c3ba97e6c79b7c10f32ade7 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 66 4.9E-7 T 10-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CpPa04_RS10035 bfa945ff4c3ba97e6c79b7c10f32ade7 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 66 82 4.9E-7 T 10-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CpPa04_RS10035 bfa945ff4c3ba97e6c79b7c10f32ade7 257 SMART SM00866 112 250 4.0E-33 T 10-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CpPa04_RS10035 bfa945ff4c3ba97e6c79b7c10f32ade7 257 SUPERFAMILY SSF64288 80 255 1.44E-45 T 10-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CpPa04_RS10035 bfa945ff4c3ba97e6c79b7c10f32ade7 257 Gene3D G3DSA:3.40.1410.10 89 255 3.7E-44 T 10-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CpPa04_RS10035 bfa945ff4c3ba97e6c79b7c10f32ade7 257 SUPERFAMILY SSF46785 27 96 2.61E-17 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS10035 bfa945ff4c3ba97e6c79b7c10f32ade7 257 Pfam PF07702 UTRA domain 113 249 1.3E-32 T 10-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CpPa04_RS10035 bfa945ff4c3ba97e6c79b7c10f32ade7 257 Gene3D G3DSA:1.10.10.10 26 88 2.7E-21 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS10035 bfa945ff4c3ba97e6c79b7c10f32ade7 257 Pfam PF00392 Bacterial regulatory proteins, gntR family 36 92 3.7E-16 T 10-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CpPa04_RS10035 bfa945ff4c3ba97e6c79b7c10f32ade7 257 SMART SM00345 33 92 7.6E-13 T 10-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CpPa04_RS07395 9987c2f719b059f5a3380b9746fd3b6f 70 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 8 66 6.6E-16 T 10-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CpPa04_RS07395 9987c2f719b059f5a3380b9746fd3b6f 70 SUPERFAMILY SSF47413 7 65 1.51E-7 T 10-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CpPa04_RS07395 9987c2f719b059f5a3380b9746fd3b6f 70 Gene3D G3DSA:1.10.260.40 8 68 4.7E-10 T 10-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CpPa04_RS03840 5b27805decce2cebe52c7d0a4753383c 466 SUPERFAMILY SSF52540 270 461 5.09E-42 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03840 5b27805decce2cebe52c7d0a4753383c 466 SMART SM00382 278 466 5.4E-8 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS03840 5b27805decce2cebe52c7d0a4753383c 466 SMART SM00382 31 208 1.3E-13 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS03840 5b27805decce2cebe52c7d0a4753383c 466 Pfam PF00005 ABC transporter 272 421 1.4E-23 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS03840 5b27805decce2cebe52c7d0a4753383c 466 Pfam PF00005 ABC transporter 22 159 2.2E-21 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS03840 5b27805decce2cebe52c7d0a4753383c 466 ProSitePatterns PS00211 ABC transporters family signature. 394 408 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS03840 5b27805decce2cebe52c7d0a4753383c 466 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS03840 5b27805decce2cebe52c7d0a4753383c 466 SUPERFAMILY SSF52540 4 222 4.05E-48 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03840 5b27805decce2cebe52c7d0a4753383c 466 Gene3D G3DSA:3.40.50.300 14 228 8.3E-52 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03840 5b27805decce2cebe52c7d0a4753383c 466 Gene3D G3DSA:3.40.50.300 265 453 1.0E-44 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04310 b3f6a0462cecdee9dc82ab7629d2fbdc 326 Gene3D G3DSA:1.10.287.80 268 314 5.3E-23 T 10-03-2017 CpPa04_RS04310 b3f6a0462cecdee9dc82ab7629d2fbdc 326 SUPERFAMILY SSF52943 2 319 7.32E-76 T 10-03-2017 IPR023633 ATPase, F1 complex, gamma subunit domain Reactome: R-HSA-163210 CpPa04_RS04310 b3f6a0462cecdee9dc82ab7629d2fbdc 326 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 2.4E-31 T 10-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 CpPa04_RS04310 b3f6a0462cecdee9dc82ab7629d2fbdc 326 PRINTS PR00126 ATP synthase gamma subunit signature 266 285 2.4E-31 T 10-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 CpPa04_RS04310 b3f6a0462cecdee9dc82ab7629d2fbdc 326 PRINTS PR00126 ATP synthase gamma subunit signature 297 318 2.4E-31 T 10-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 CpPa04_RS04310 b3f6a0462cecdee9dc82ab7629d2fbdc 326 PRINTS PR00126 ATP synthase gamma subunit signature 186 203 2.4E-31 T 10-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 CpPa04_RS04310 b3f6a0462cecdee9dc82ab7629d2fbdc 326 Gene3D G3DSA:3.40.1380.10 63 212 5.3E-40 T 10-03-2017 CpPa04_RS04310 b3f6a0462cecdee9dc82ab7629d2fbdc 326 Pfam PF00231 ATP synthase 3 319 3.8E-82 T 10-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 CpPa04_RS04310 b3f6a0462cecdee9dc82ab7629d2fbdc 326 Gene3D G3DSA:1.10.287.80 234 267 3.5E-26 T 10-03-2017 CpPa04_RS04310 b3f6a0462cecdee9dc82ab7629d2fbdc 326 Gene3D G3DSA:1.10.287.80 19 60 3.5E-26 T 10-03-2017 CpPa04_RS04310 b3f6a0462cecdee9dc82ab7629d2fbdc 326 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 319 33.646 T 10-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 CpPa04_RS04310 b3f6a0462cecdee9dc82ab7629d2fbdc 326 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 305 318 - T 10-03-2017 IPR023632 ATPase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210 CpPa04_RS04310 b3f6a0462cecdee9dc82ab7629d2fbdc 326 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 319 1.4E-92 T 10-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 CpPa04_RS02130 92743453b82c901f81cd54ee824b6f55 163 Gene3D G3DSA:3.40.630.30 2 150 2.3E-31 T 10-03-2017 IPR016181 Acyl-CoA N-acyltransferase CpPa04_RS02130 92743453b82c901f81cd54ee824b6f55 163 Pfam PF00583 Acetyltransferase (GNAT) family 52 129 4.9E-15 T 10-03-2017 IPR000182 GNAT domain GO:0008080 CpPa04_RS02130 92743453b82c901f81cd54ee824b6f55 163 SUPERFAMILY SSF55729 2 151 1.06E-29 T 10-03-2017 IPR016181 Acyl-CoA N-acyltransferase CpPa04_RS02130 92743453b82c901f81cd54ee824b6f55 163 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 11 148 2.2E-28 T 10-03-2017 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 CpPa04_RS10595 7985d6a1aa4ebecbfa4622ac0fdf2ccf 416 PIRSF PIRSF001413 3 411 4.6E-164 T 10-03-2017 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CpPa04_RS10595 7985d6a1aa4ebecbfa4622ac0fdf2ccf 416 Gene3D G3DSA:3.40.50.1100 190 406 1.8E-90 T 10-03-2017 CpPa04_RS10595 7985d6a1aa4ebecbfa4622ac0fdf2ccf 416 Gene3D G3DSA:3.40.50.1100 110 189 2.5E-20 T 10-03-2017 CpPa04_RS10595 7985d6a1aa4ebecbfa4622ac0fdf2ccf 416 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 16 405 6.1E-182 T 10-03-2017 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CpPa04_RS10595 7985d6a1aa4ebecbfa4622ac0fdf2ccf 416 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 11 406 50.701 T 10-03-2017 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CpPa04_RS10595 7985d6a1aa4ebecbfa4622ac0fdf2ccf 416 SUPERFAMILY SSF53686 15 404 2.1E-137 T 10-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CpPa04_RS10595 7985d6a1aa4ebecbfa4622ac0fdf2ccf 416 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 62 390 2.3E-46 T 10-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CpPa04_RS10595 7985d6a1aa4ebecbfa4622ac0fdf2ccf 416 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 93 107 - T 10-03-2017 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CpPa04_RS01280 9c29cee1a88b2ec8208ba81819b7cd78 289 Pfam PF04055 Radical SAM superfamily 71 221 5.7E-27 T 10-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CpPa04_RS01280 9c29cee1a88b2ec8208ba81819b7cd78 289 Gene3D G3DSA:3.80.30.10 114 286 1.1E-60 T 10-03-2017 CpPa04_RS01280 9c29cee1a88b2ec8208ba81819b7cd78 289 Pfam PF13353 4Fe-4S single cluster domain 61 181 1.3E-17 T 10-03-2017 CpPa04_RS01280 9c29cee1a88b2ec8208ba81819b7cd78 289 ProSitePatterns PS01087 Radical activating enzymes signature. 63 84 - T 10-03-2017 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CpPa04_RS01280 9c29cee1a88b2ec8208ba81819b7cd78 289 SUPERFAMILY SSF102114 71 263 5.62E-28 T 10-03-2017 CpPa04_RS01280 9c29cee1a88b2ec8208ba81819b7cd78 289 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 52 283 1.4E-94 T 10-03-2017 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 CpPa04_RS01810 7b7687d04a844e35ec6f287649ec8815 248 Gene3D G3DSA:3.30.1140.32 109 207 1.2E-42 T 10-03-2017 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01810 7b7687d04a844e35ec6f287649ec8815 248 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 202 2.5E-37 T 10-03-2017 CpPa04_RS01810 7b7687d04a844e35ec6f287649ec8815 248 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 1.7E-91 T 10-03-2017 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CpPa04_RS01810 7b7687d04a844e35ec6f287649ec8815 248 SUPERFAMILY SSF54821 106 206 3.01E-37 T 10-03-2017 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01810 7b7687d04a844e35ec6f287649ec8815 248 SMART SM00322 59 124 3.1E-8 T 10-03-2017 IPR004087 K Homology domain GO:0003676 CpPa04_RS01810 7b7687d04a844e35ec6f287649ec8815 248 Gene3D G3DSA:3.30.300.20 17 106 1.1E-32 T 10-03-2017 IPR015946 K homology domain-like, alpha/beta CpPa04_RS01810 7b7687d04a844e35ec6f287649ec8815 248 SUPERFAMILY SSF54814 2 105 3.92E-37 T 10-03-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 CpPa04_RS01810 7b7687d04a844e35ec6f287649ec8815 248 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 10-03-2017 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01810 7b7687d04a844e35ec6f287649ec8815 248 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 37.036 T 10-03-2017 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CpPa04_RS01810 7b7687d04a844e35ec6f287649ec8815 248 Pfam PF07650 KH domain 38 107 1.2E-18 T 10-03-2017 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS05115 b5e38ecd70021fd7bd64f6cc7ec4dfc5 450 Pfam PF00270 DEAD/DEAH box helicase 26 196 1.5E-41 T 10-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CpPa04_RS05115 b5e38ecd70021fd7bd64f6cc7ec4dfc5 450 SUPERFAMILY SSF52540 2 207 2.66E-59 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05115 b5e38ecd70021fd7bd64f6cc7ec4dfc5 450 Pfam PF00271 Helicase conserved C-terminal domain 242 338 2.8E-23 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS05115 b5e38ecd70021fd7bd64f6cc7ec4dfc5 450 SUPERFAMILY SSF52540 256 369 9.8E-43 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05115 b5e38ecd70021fd7bd64f6cc7ec4dfc5 450 SUPERFAMILY SSF52540 39 99 9.8E-43 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05115 b5e38ecd70021fd7bd64f6cc7ec4dfc5 450 SMART SM00487 21 222 1.6E-51 T 10-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CpPa04_RS05115 b5e38ecd70021fd7bd64f6cc7ec4dfc5 450 Gene3D G3DSA:3.40.50.300 1 220 6.5E-69 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05115 b5e38ecd70021fd7bd64f6cc7ec4dfc5 450 SMART SM00490 257 338 1.0E-26 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS05115 b5e38ecd70021fd7bd64f6cc7ec4dfc5 450 Gene3D G3DSA:3.40.50.300 221 373 5.6E-38 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04805 f21760bd5ca5bf750da39d2fe5d0f342 274 SMART SM00967 35 108 7.3E-9 T 10-03-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 CpPa04_RS04805 f21760bd5ca5bf750da39d2fe5d0f342 274 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 35 104 3.8E-7 T 10-03-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 CpPa04_RS04805 f21760bd5ca5bf750da39d2fe5d0f342 274 Gene3D G3DSA:3.40.1280.10 114 267 2.4E-44 T 10-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CpPa04_RS04805 f21760bd5ca5bf750da39d2fe5d0f342 274 Pfam PF00588 SpoU rRNA Methylase family 120 261 6.5E-34 T 10-03-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CpPa04_RS04805 f21760bd5ca5bf750da39d2fe5d0f342 274 SUPERFAMILY SSF55315 12 104 1.1E-15 T 10-03-2017 IPR029064 50S ribosomal protein L30e-like CpPa04_RS04805 f21760bd5ca5bf750da39d2fe5d0f342 274 SUPERFAMILY SSF75217 113 268 9.81E-39 T 10-03-2017 IPR029028 Alpha/beta knot methyltransferases CpPa04_RS04805 f21760bd5ca5bf750da39d2fe5d0f342 274 Gene3D G3DSA:3.30.1330.30 10 103 3.1E-22 T 10-03-2017 IPR029064 50S ribosomal protein L30e-like CpPa04_RS02590 a3961d4b962ce1665a40a09d8a7bf492 385 PRINTS PR00714 Phosphomannose isomerase type I signature 261 280 1.3E-63 T 10-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CpPa04_RS02590 a3961d4b962ce1665a40a09d8a7bf492 385 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 1.3E-63 T 10-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CpPa04_RS02590 a3961d4b962ce1665a40a09d8a7bf492 385 PRINTS PR00714 Phosphomannose isomerase type I signature 121 144 1.3E-63 T 10-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CpPa04_RS02590 a3961d4b962ce1665a40a09d8a7bf492 385 PRINTS PR00714 Phosphomannose isomerase type I signature 242 261 1.3E-63 T 10-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CpPa04_RS02590 a3961d4b962ce1665a40a09d8a7bf492 385 PRINTS PR00714 Phosphomannose isomerase type I signature 280 299 1.3E-63 T 10-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CpPa04_RS02590 a3961d4b962ce1665a40a09d8a7bf492 385 PRINTS PR00714 Phosphomannose isomerase type I signature 76 97 1.3E-63 T 10-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CpPa04_RS02590 a3961d4b962ce1665a40a09d8a7bf492 385 PRINTS PR00714 Phosphomannose isomerase type I signature 31 46 1.3E-63 T 10-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CpPa04_RS02590 a3961d4b962ce1665a40a09d8a7bf492 385 PRINTS PR00714 Phosphomannose isomerase type I signature 226 241 1.3E-63 T 10-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CpPa04_RS02590 a3961d4b962ce1665a40a09d8a7bf492 385 Gene3D G3DSA:2.60.120.10 244 279 1.1E-59 T 10-03-2017 IPR014710 RmlC-like jelly roll fold CpPa04_RS02590 a3961d4b962ce1665a40a09d8a7bf492 385 Gene3D G3DSA:2.60.120.10 6 135 1.1E-59 T 10-03-2017 IPR014710 RmlC-like jelly roll fold CpPa04_RS02590 a3961d4b962ce1665a40a09d8a7bf492 385 Gene3D G3DSA:1.10.441.10 136 237 5.9E-27 T 10-03-2017 CpPa04_RS02590 a3961d4b962ce1665a40a09d8a7bf492 385 Gene3D G3DSA:1.10.441.10 280 291 5.9E-27 T 10-03-2017 CpPa04_RS02590 a3961d4b962ce1665a40a09d8a7bf492 385 PIRSF PIRSF001480 1 385 4.9E-98 T 10-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CpPa04_RS02590 a3961d4b962ce1665a40a09d8a7bf492 385 Pfam PF01238 Phosphomannose isomerase type I 2 352 1.4E-71 T 10-03-2017 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CpPa04_RS02590 a3961d4b962ce1665a40a09d8a7bf492 385 Gene3D G3DSA:2.60.120.10 292 356 9.9E-13 T 10-03-2017 IPR014710 RmlC-like jelly roll fold CpPa04_RS02590 a3961d4b962ce1665a40a09d8a7bf492 385 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 121 129 - T 10-03-2017 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CpPa04_RS02590 a3961d4b962ce1665a40a09d8a7bf492 385 SUPERFAMILY SSF51182 1 374 3.56E-91 T 10-03-2017 IPR011051 RmlC-like cupin domain CpPa04_RS02590 a3961d4b962ce1665a40a09d8a7bf492 385 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 8 381 1.9E-72 T 10-03-2017 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CpPa04_RS07730 d4124564d1e01adb20a837e3974ba8b0 242 Gene3D G3DSA:2.40.50.140 3 82 5.3E-30 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS07730 d4124564d1e01adb20a837e3974ba8b0 242 Hamap MF_00201 DNA repair protein RecO [recO]. 4 242 22.835 T 10-03-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CpPa04_RS07730 d4124564d1e01adb20a837e3974ba8b0 242 Pfam PF11967 Recombination protein O N terminal 6 81 9.5E-24 T 10-03-2017 IPR022572 DNA replication/recombination mediator RecO, N-terminal CpPa04_RS07730 d4124564d1e01adb20a837e3974ba8b0 242 Pfam PF02565 Recombination protein O C terminal 87 236 5.9E-26 T 10-03-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CpPa04_RS07730 d4124564d1e01adb20a837e3974ba8b0 242 TIGRFAM TIGR00613 reco: DNA repair protein RecO 8 242 5.4E-29 T 10-03-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CpPa04_RS07730 d4124564d1e01adb20a837e3974ba8b0 242 SUPERFAMILY SSF57863 85 231 1.1E-31 T 10-03-2017 CpPa04_RS07730 d4124564d1e01adb20a837e3974ba8b0 242 SUPERFAMILY SSF50249 5 81 2.23E-18 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS05040 f6faf5e55231a582c8115992e1c3906e 523 Gene3D G3DSA:2.60.40.1280 39 221 1.1E-28 T 10-03-2017 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 CpPa04_RS05040 f6faf5e55231a582c8115992e1c3906e 523 SUPERFAMILY SSF49401 62 162 2.73E-14 T 10-03-2017 IPR008966 Adhesion domain CpPa04_RS09720 8d497a0cae9862890dbdac03e0f47d77 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 15 30 1.3E-6 T 10-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CpPa04_RS09720 8d497a0cae9862890dbdac03e0f47d77 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 80 1.3E-6 T 10-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CpPa04_RS09720 8d497a0cae9862890dbdac03e0f47d77 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 50 65 1.3E-6 T 10-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CpPa04_RS09720 8d497a0cae9862890dbdac03e0f47d77 103 SUPERFAMILY SSF46785 8 89 8.86E-18 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS09720 8d497a0cae9862890dbdac03e0f47d77 103 Pfam PF12840 Helix-turn-helix domain 13 74 2.4E-10 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS09720 8d497a0cae9862890dbdac03e0f47d77 103 SMART SM00418 13 94 1.2E-8 T 10-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CpPa04_RS09720 8d497a0cae9862890dbdac03e0f47d77 103 Gene3D G3DSA:1.10.10.10 6 92 2.5E-18 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS09085 5fd212a4c4f02e7d1ee26e14f496db22 582 SUPERFAMILY SSF51905 485 546 8.26E-88 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS09085 5fd212a4c4f02e7d1ee26e14f496db22 582 SUPERFAMILY SSF51905 13 302 8.26E-88 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS09085 5fd212a4c4f02e7d1ee26e14f496db22 582 SUPERFAMILY SSF54373 304 486 7.26E-58 T 10-03-2017 CpPa04_RS09085 5fd212a4c4f02e7d1ee26e14f496db22 582 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 268 282 - T 10-03-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CpPa04_RS09085 5fd212a4c4f02e7d1ee26e14f496db22 582 TIGRFAM TIGR01810 betA: choline dehydrogenase 17 549 3.6E-242 T 10-03-2017 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 CpPa04_RS09085 5fd212a4c4f02e7d1ee26e14f496db22 582 PIRSF PIRSF000137 3 548 1.2E-137 T 10-03-2017 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 CpPa04_RS09085 5fd212a4c4f02e7d1ee26e14f496db22 582 Gene3D G3DSA:3.50.50.60 13 139 1.5E-116 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS09085 5fd212a4c4f02e7d1ee26e14f496db22 582 Gene3D G3DSA:3.50.50.60 202 327 1.5E-116 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS09085 5fd212a4c4f02e7d1ee26e14f496db22 582 Gene3D G3DSA:3.50.50.60 479 545 1.5E-116 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS09085 5fd212a4c4f02e7d1ee26e14f496db22 582 Pfam PF05199 GMC oxidoreductase 404 539 1.4E-36 T 10-03-2017 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 CpPa04_RS09085 5fd212a4c4f02e7d1ee26e14f496db22 582 Pfam PF00732 GMC oxidoreductase 17 309 1.2E-81 T 10-03-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CpPa04_RS09085 5fd212a4c4f02e7d1ee26e14f496db22 582 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 94 117 - T 10-03-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CpPa04_RS08930 8bdeccb80e5ceed09250fa295f35fd7e 491 SUPERFAMILY SSF53756 9 484 1.38E-133 T 10-03-2017 CpPa04_RS08930 8bdeccb80e5ceed09250fa295f35fd7e 491 Pfam PF00982 Glycosyltransferase family 20 9 482 9.1E-137 T 10-03-2017 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 CpPa04_RS08930 8bdeccb80e5ceed09250fa295f35fd7e 491 Gene3D G3DSA:3.40.50.2000 9 268 5.3E-81 T 10-03-2017 CpPa04_RS08930 8bdeccb80e5ceed09250fa295f35fd7e 491 Gene3D G3DSA:3.40.50.2000 269 466 1.4E-69 T 10-03-2017 CpPa04_RS04735 b702ca561b5247dfad194ed049de3290 487 Gene3D G3DSA:2.40.50.140 207 281 6.1E-30 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS04735 b702ca561b5247dfad194ed049de3290 487 SMART SM00316 119 186 3.8E-11 T 10-03-2017 IPR022967 RNA-binding domain, S1 CpPa04_RS04735 b702ca561b5247dfad194ed049de3290 487 SMART SM00316 32 103 2.2E-15 T 10-03-2017 IPR022967 RNA-binding domain, S1 CpPa04_RS04735 b702ca561b5247dfad194ed049de3290 487 SMART SM00316 290 361 4.7E-25 T 10-03-2017 IPR022967 RNA-binding domain, S1 CpPa04_RS04735 b702ca561b5247dfad194ed049de3290 487 SMART SM00316 205 275 8.2E-28 T 10-03-2017 IPR022967 RNA-binding domain, S1 CpPa04_RS04735 b702ca561b5247dfad194ed049de3290 487 PRINTS PR00681 Ribosomal protein S1 signature 34 52 3.2E-86 T 10-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CpPa04_RS04735 b702ca561b5247dfad194ed049de3290 487 PRINTS PR00681 Ribosomal protein S1 signature 227 248 3.2E-86 T 10-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CpPa04_RS04735 b702ca561b5247dfad194ed049de3290 487 PRINTS PR00681 Ribosomal protein S1 signature 305 324 3.2E-86 T 10-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CpPa04_RS04735 b702ca561b5247dfad194ed049de3290 487 PRINTS PR00681 Ribosomal protein S1 signature 141 158 3.2E-86 T 10-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CpPa04_RS04735 b702ca561b5247dfad194ed049de3290 487 PRINTS PR00681 Ribosomal protein S1 signature 344 362 3.2E-86 T 10-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CpPa04_RS04735 b702ca561b5247dfad194ed049de3290 487 PRINTS PR00681 Ribosomal protein S1 signature 52 66 3.2E-86 T 10-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CpPa04_RS04735 b702ca561b5247dfad194ed049de3290 487 PRINTS PR00681 Ribosomal protein S1 signature 100 119 3.2E-86 T 10-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CpPa04_RS04735 b702ca561b5247dfad194ed049de3290 487 PRINTS PR00681 Ribosomal protein S1 signature 124 140 3.2E-86 T 10-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CpPa04_RS04735 b702ca561b5247dfad194ed049de3290 487 PRINTS PR00681 Ribosomal protein S1 signature 170 190 3.2E-86 T 10-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CpPa04_RS04735 b702ca561b5247dfad194ed049de3290 487 SUPERFAMILY SSF50249 205 287 2.76E-27 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS04735 b702ca561b5247dfad194ed049de3290 487 Gene3D G3DSA:2.40.50.140 26 104 3.8E-18 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS04735 b702ca561b5247dfad194ed049de3290 487 Gene3D G3DSA:2.40.50.140 111 187 1.8E-15 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS04735 b702ca561b5247dfad194ed049de3290 487 SUPERFAMILY SSF50249 275 365 1.12E-25 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS04735 b702ca561b5247dfad194ed049de3290 487 SUPERFAMILY SSF50249 106 189 1.19E-14 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS04735 b702ca561b5247dfad194ed049de3290 487 SUPERFAMILY SSF50249 26 128 1.86E-22 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS04735 b702ca561b5247dfad194ed049de3290 487 Pfam PF00575 S1 RNA binding domain 119 186 2.4E-14 T 10-03-2017 IPR003029 S1 domain GO:0003676 CpPa04_RS04735 b702ca561b5247dfad194ed049de3290 487 Pfam PF00575 S1 RNA binding domain 204 275 1.8E-25 T 10-03-2017 IPR003029 S1 domain GO:0003676 CpPa04_RS04735 b702ca561b5247dfad194ed049de3290 487 Pfam PF00575 S1 RNA binding domain 289 361 6.2E-24 T 10-03-2017 IPR003029 S1 domain GO:0003676 CpPa04_RS04735 b702ca561b5247dfad194ed049de3290 487 Pfam PF00575 S1 RNA binding domain 31 103 2.0E-14 T 10-03-2017 IPR003029 S1 domain GO:0003676 CpPa04_RS04735 b702ca561b5247dfad194ed049de3290 487 Gene3D G3DSA:2.40.50.140 282 365 6.1E-29 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS01580 798e71e34511fae8cfdb5d6d3dabf605 276 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 78 275 21.334 T 10-03-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 CpPa04_RS01580 798e71e34511fae8cfdb5d6d3dabf605 276 ProSitePatterns PS01014 Transcription termination factor nusG signature. 258 267 - T 10-03-2017 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CpPa04_RS01580 798e71e34511fae8cfdb5d6d3dabf605 276 PRINTS PR00338 Transcription termination factor NUSG signature 233 248 5.3E-15 T 10-03-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 CpPa04_RS01580 798e71e34511fae8cfdb5d6d3dabf605 276 PRINTS PR00338 Transcription termination factor NUSG signature 251 267 5.3E-15 T 10-03-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 CpPa04_RS01580 798e71e34511fae8cfdb5d6d3dabf605 276 PRINTS PR00338 Transcription termination factor NUSG signature 133 145 5.3E-15 T 10-03-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 CpPa04_RS01580 798e71e34511fae8cfdb5d6d3dabf605 276 SUPERFAMILY SSF50104 219 275 2.61E-14 T 10-03-2017 IPR008991 Translation protein SH3-like domain CpPa04_RS01580 798e71e34511fae8cfdb5d6d3dabf605 276 SMART SM00738 78 186 1.2E-44 T 10-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CpPa04_RS01580 798e71e34511fae8cfdb5d6d3dabf605 276 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 81 275 7.3E-56 T 10-03-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 CpPa04_RS01580 798e71e34511fae8cfdb5d6d3dabf605 276 Gene3D G3DSA:3.30.70.940 80 185 8.0E-40 T 10-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CpPa04_RS01580 798e71e34511fae8cfdb5d6d3dabf605 276 Gene3D G3DSA:2.30.30.30 214 275 1.8E-25 T 10-03-2017 IPR014722 Ribosomal protein L2 domain 2 CpPa04_RS01580 798e71e34511fae8cfdb5d6d3dabf605 276 SUPERFAMILY SSF82679 80 184 2.75E-34 T 10-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CpPa04_RS01580 798e71e34511fae8cfdb5d6d3dabf605 276 Pfam PF02357 Transcription termination factor nusG 80 183 2.6E-26 T 10-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CpPa04_RS01200 6366cac4e59cf7652edbebefdcff2fd4 460 Gene3D G3DSA:3.40.50.720 180 399 5.8E-44 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS01200 6366cac4e59cf7652edbebefdcff2fd4 460 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 7 172 3.0E-41 T 10-03-2017 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CpPa04_RS01200 6366cac4e59cf7652edbebefdcff2fd4 460 Pfam PF04321 RmlD substrate binding domain 181 454 1.1E-72 T 10-03-2017 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581 CpPa04_RS01200 6366cac4e59cf7652edbebefdcff2fd4 460 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 180 5.0E-57 T 10-03-2017 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CpPa04_RS01200 6366cac4e59cf7652edbebefdcff2fd4 460 SUPERFAMILY SSF51735 181 452 1.94E-71 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS01200 6366cac4e59cf7652edbebefdcff2fd4 460 Gene3D G3DSA:2.60.120.10 1 174 7.2E-51 T 10-03-2017 IPR014710 RmlC-like jelly roll fold CpPa04_RS01200 6366cac4e59cf7652edbebefdcff2fd4 460 SUPERFAMILY SSF51182 1 175 2.31E-48 T 10-03-2017 IPR011051 RmlC-like cupin domain CpPa04_RS01200 6366cac4e59cf7652edbebefdcff2fd4 460 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 181 452 3.1E-69 T 10-03-2017 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581 CpPa04_RS08630 d939a31e9bd4c47bb15cd3bbf84b7f9b 311 Gene3D G3DSA:3.40.50.1100 44 144 6.7E-38 T 10-03-2017 CpPa04_RS08630 d939a31e9bd4c47bb15cd3bbf84b7f9b 311 SUPERFAMILY SSF53686 3 307 1.06E-100 T 10-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CpPa04_RS08630 d939a31e9bd4c47bb15cd3bbf84b7f9b 311 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 306 1.3E-131 T 10-03-2017 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CpPa04_RS08630 d939a31e9bd4c47bb15cd3bbf84b7f9b 311 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 10-03-2017 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CpPa04_RS08630 d939a31e9bd4c47bb15cd3bbf84b7f9b 311 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 295 9.5E-66 T 10-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CpPa04_RS08630 d939a31e9bd4c47bb15cd3bbf84b7f9b 311 Gene3D G3DSA:3.40.50.1100 151 309 2.7E-75 T 10-03-2017 CpPa04_RS08630 d939a31e9bd4c47bb15cd3bbf84b7f9b 311 Gene3D G3DSA:3.40.50.1100 2 43 2.7E-75 T 10-03-2017 CpPa04_RS08630 d939a31e9bd4c47bb15cd3bbf84b7f9b 311 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 306 1.1E-135 T 10-03-2017 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CpPa04_RS09535 37bd2388bbeeef26435910b6ed2d7c1f 849 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 632 650 - T 10-03-2017 IPR028299 ClpA/B, conserved site 2 CpPa04_RS09535 37bd2388bbeeef26435910b6ed2d7c1f 849 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 647 665 2.7E-41 T 10-03-2017 IPR001270 ClpA/B family GO:0005524 CpPa04_RS09535 37bd2388bbeeef26435910b6ed2d7c1f 849 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 709 723 2.7E-41 T 10-03-2017 IPR001270 ClpA/B family GO:0005524 CpPa04_RS09535 37bd2388bbeeef26435910b6ed2d7c1f 849 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 602 620 2.7E-41 T 10-03-2017 IPR001270 ClpA/B family GO:0005524 CpPa04_RS09535 37bd2388bbeeef26435910b6ed2d7c1f 849 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 676 694 2.7E-41 T 10-03-2017 IPR001270 ClpA/B family GO:0005524 CpPa04_RS09535 37bd2388bbeeef26435910b6ed2d7c1f 849 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 7 840 0.0 T 10-03-2017 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 CpPa04_RS09535 37bd2388bbeeef26435910b6ed2d7c1f 849 SUPERFAMILY SSF52540 547 839 6.1E-79 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09535 37bd2388bbeeef26435910b6ed2d7c1f 849 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 318 5.8E-12 T 10-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 CpPa04_RS09535 37bd2388bbeeef26435910b6ed2d7c1f 849 SUPERFAMILY SSF52540 160 546 2.85E-98 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09535 37bd2388bbeeef26435910b6ed2d7c1f 849 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 145 3.7E-9 T 10-03-2017 IPR004176 Clp, N-terminal GO:0019538 CpPa04_RS09535 37bd2388bbeeef26435910b6ed2d7c1f 849 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 67 9.3E-10 T 10-03-2017 IPR004176 Clp, N-terminal GO:0019538 CpPa04_RS09535 37bd2388bbeeef26435910b6ed2d7c1f 849 Gene3D G3DSA:1.10.8.60 766 845 7.2E-33 T 10-03-2017 CpPa04_RS09535 37bd2388bbeeef26435910b6ed2d7c1f 849 Gene3D G3DSA:1.10.1780.10 1 149 6.9E-36 T 10-03-2017 IPR004176 Clp, N-terminal GO:0019538 CpPa04_RS09535 37bd2388bbeeef26435910b6ed2d7c1f 849 Gene3D G3DSA:3.40.50.300 160 344 7.0E-50 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09535 37bd2388bbeeef26435910b6ed2d7c1f 849 Gene3D G3DSA:3.40.50.300 551 765 7.1E-56 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09535 37bd2388bbeeef26435910b6ed2d7c1f 849 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 296 308 - T 10-03-2017 IPR018368 ClpA/B, conserved site 1 GO:0005524 CpPa04_RS09535 37bd2388bbeeef26435910b6ed2d7c1f 849 SMART SM00382 598 756 3.5E-11 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS09535 37bd2388bbeeef26435910b6ed2d7c1f 849 SMART SM00382 199 345 3.2E-8 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS09535 37bd2388bbeeef26435910b6ed2d7c1f 849 SMART SM01086 755 844 1.4E-39 T 10-03-2017 IPR019489 Clp ATPase, C-terminal CpPa04_RS09535 37bd2388bbeeef26435910b6ed2d7c1f 849 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 755 835 2.9E-28 T 10-03-2017 IPR019489 Clp ATPase, C-terminal CpPa04_RS09535 37bd2388bbeeef26435910b6ed2d7c1f 849 Pfam PF07724 AAA domain (Cdc48 subfamily) 597 748 3.4E-50 T 10-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 CpPa04_RS09535 37bd2388bbeeef26435910b6ed2d7c1f 849 Gene3D G3DSA:1.10.8.60 345 428 4.1E-36 T 10-03-2017 CpPa04_RS09535 37bd2388bbeeef26435910b6ed2d7c1f 849 SUPERFAMILY SSF81923 7 157 5.49E-33 T 10-03-2017 IPR004176 Clp, N-terminal GO:0019538 CpPa04_RS03520 48d6239726eb92423be47a02246eb0b3 476 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 301 317 2.6E-17 T 10-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS03520 48d6239726eb92423be47a02246eb0b3 476 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 238 251 2.6E-17 T 10-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS03520 48d6239726eb92423be47a02246eb0b3 476 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 274 292 2.6E-17 T 10-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS03520 48d6239726eb92423be47a02246eb0b3 476 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 357 374 2.6E-17 T 10-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS03520 48d6239726eb92423be47a02246eb0b3 476 SUPERFAMILY SSF51735 120 296 3.95E-44 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS03520 48d6239726eb92423be47a02246eb0b3 476 SMART SM00846 119 280 3.7E-53 T 10-03-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS03520 48d6239726eb92423be47a02246eb0b3 476 SUPERFAMILY SSF55347 280 443 2.98E-55 T 10-03-2017 CpPa04_RS03520 48d6239726eb92423be47a02246eb0b3 476 Gene3D G3DSA:3.30.360.10 289 444 1.4E-58 T 10-03-2017 CpPa04_RS03520 48d6239726eb92423be47a02246eb0b3 476 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 278 285 - T 10-03-2017 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS03520 48d6239726eb92423be47a02246eb0b3 476 Gene3D G3DSA:3.40.50.720 120 288 4.4E-50 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS03520 48d6239726eb92423be47a02246eb0b3 476 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 120 280 2.5E-38 T 10-03-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS03520 48d6239726eb92423be47a02246eb0b3 476 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 121 454 1.9E-111 T 10-03-2017 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS03520 48d6239726eb92423be47a02246eb0b3 476 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 285 442 3.8E-49 T 10-03-2017 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS07885 a249e90e30a8fa14a9f46cc1684d8ac2 423 Gene3D G3DSA:3.40.50.1820 307 416 1.8E-49 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS07885 a249e90e30a8fa14a9f46cc1684d8ac2 423 Gene3D G3DSA:3.40.50.1820 15 235 1.8E-49 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS07885 a249e90e30a8fa14a9f46cc1684d8ac2 423 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 50 58 5.2E-8 T 10-03-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CpPa04_RS07885 a249e90e30a8fa14a9f46cc1684d8ac2 423 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 80 91 5.2E-8 T 10-03-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CpPa04_RS07885 a249e90e30a8fa14a9f46cc1684d8ac2 423 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 132 146 5.2E-8 T 10-03-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CpPa04_RS07885 a249e90e30a8fa14a9f46cc1684d8ac2 423 Pfam PF00561 alpha/beta hydrolase fold 48 183 2.2E-13 T 10-03-2017 IPR000073 Alpha/beta hydrolase fold-1 CpPa04_RS07885 a249e90e30a8fa14a9f46cc1684d8ac2 423 SUPERFAMILY SSF53474 329 416 8.25E-25 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS07885 a249e90e30a8fa14a9f46cc1684d8ac2 423 SUPERFAMILY SSF53474 31 162 8.25E-25 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS06875 82f48b2619996ae8ef4375307e8373f1 118 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 63 117 8.0E-21 T 10-03-2017 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CpPa04_RS06875 82f48b2619996ae8ef4375307e8373f1 118 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 15 117 28.892 T 10-03-2017 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CpPa04_RS06875 82f48b2619996ae8ef4375307e8373f1 118 SUPERFAMILY SSF141734 13 114 1.11E-43 T 10-03-2017 CpPa04_RS06875 82f48b2619996ae8ef4375307e8373f1 118 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 40 112 6.9E-33 T 10-03-2017 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CpPa04_RS03965 7b4f130e38fb6b9bc32ccc948b4b7fce 263 SUPERFAMILY SSF102405 43 245 2.29E-62 T 10-03-2017 CpPa04_RS03965 7b4f130e38fb6b9bc32ccc948b4b7fce 263 Gene3D G3DSA:3.40.50.450 52 248 4.4E-64 T 10-03-2017 CpPa04_RS03965 7b4f130e38fb6b9bc32ccc948b4b7fce 263 Pfam PF03641 Possible lysine decarboxylase 115 245 3.0E-32 T 10-03-2017 IPR031100 LOG family CpPa04_RS03965 7b4f130e38fb6b9bc32ccc948b4b7fce 263 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 73 245 3.4E-47 T 10-03-2017 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CpPa04_RS05695 87e5d36f6d657f8183afc15763a0e85d 313 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 307 32.314 T 10-03-2017 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CpPa04_RS05695 87e5d36f6d657f8183afc15763a0e85d 313 Pfam PF02911 Formyl transferase, C-terminal domain 207 304 5.9E-22 T 10-03-2017 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CpPa04_RS05695 87e5d36f6d657f8183afc15763a0e85d 313 Gene3D G3DSA:3.10.25.10 211 312 9.0E-27 T 10-03-2017 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CpPa04_RS05695 87e5d36f6d657f8183afc15763a0e85d 313 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 306 1.6E-72 T 10-03-2017 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CpPa04_RS05695 87e5d36f6d657f8183afc15763a0e85d 313 SUPERFAMILY SSF53328 1 207 4.58E-58 T 10-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CpPa04_RS05695 87e5d36f6d657f8183afc15763a0e85d 313 Pfam PF00551 Formyl transferase 3 184 4.3E-35 T 10-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CpPa04_RS05695 87e5d36f6d657f8183afc15763a0e85d 313 Gene3D G3DSA:3.40.50.170 1 208 4.3E-62 T 10-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CpPa04_RS05695 87e5d36f6d657f8183afc15763a0e85d 313 SUPERFAMILY SSF50486 210 312 3.92E-25 T 10-03-2017 IPR011034 Formyl transferase, C-terminal-like GO:0003824 CpPa04_RS03200 ff70c462b0476a406034d6feaa68a13f 251 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 221 2.6E-27 T 10-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS03200 ff70c462b0476a406034d6feaa68a13f 251 SUPERFAMILY SSF53790 3 248 3.79E-32 T 10-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS03200 ff70c462b0476a406034d6feaa68a13f 251 PIRSF PIRSF036525 1 251 2.8E-84 T 10-03-2017 IPR012797 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase GO:0009236|GO:0043819 KEGG: 00860+2.1.1.152|MetaCyc: PWY-7376 CpPa04_RS03200 ff70c462b0476a406034d6feaa68a13f 251 TIGRFAM TIGR02434 CobF: precorrin-6A synthase (deacetylating) 2 248 8.6E-104 T 10-03-2017 IPR012797 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase GO:0009236|GO:0043819 KEGG: 00860+2.1.1.152|MetaCyc: PWY-7376 CpPa04_RS03200 ff70c462b0476a406034d6feaa68a13f 251 Gene3D G3DSA:3.40.1010.10 2 141 1.9E-37 T 10-03-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS03200 ff70c462b0476a406034d6feaa68a13f 251 Gene3D G3DSA:3.30.950.10 142 249 9.6E-43 T 10-03-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS04035 d41082ce4f24d1c79dc9b7cb55d19a2c 380 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 115 360 4.6E-87 T 10-03-2017 IPR019591 Mrp/NBP35 ATP-binding protein CpPa04_RS04035 d41082ce4f24d1c79dc9b7cb55d19a2c 380 SUPERFAMILY SSF52540 115 361 4.32E-50 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04035 d41082ce4f24d1c79dc9b7cb55d19a2c 380 Pfam PF01883 Domain of unknown function DUF59 10 80 4.8E-21 T 10-03-2017 IPR002744 Domain of unknown function DUF59 CpPa04_RS04035 d41082ce4f24d1c79dc9b7cb55d19a2c 380 Gene3D G3DSA:3.40.50.300 107 359 1.2E-82 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04035 d41082ce4f24d1c79dc9b7cb55d19a2c 380 Hamap MF_02040 Iron-sulfur cluster carrier protein. 106 361 33.513 T 10-03-2017 IPR019591 Mrp/NBP35 ATP-binding protein CpPa04_RS04035 d41082ce4f24d1c79dc9b7cb55d19a2c 380 SUPERFAMILY SSF117916 6 93 1.24E-21 T 10-03-2017 CpPa04_RS02550 29a75294a60af761a34c2a3d01930c45 316 Pfam PF00535 Glycosyl transferase family 2 30 217 2.9E-11 T 10-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CpPa04_RS02550 29a75294a60af761a34c2a3d01930c45 316 Gene3D G3DSA:3.90.550.10 28 290 1.4E-34 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS02550 29a75294a60af761a34c2a3d01930c45 316 SUPERFAMILY SSF53448 22 280 2.2E-41 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS02175 cc9637478070ad194ff597fe8abd7ff7 380 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 19 309 1.1E-29 T 10-03-2017 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 CpPa04_RS02175 cc9637478070ad194ff597fe8abd7ff7 380 TIGRFAM TIGR01304 IMP_DH_rel_2: IMP dehydrogenase family protein 5 379 1.0E-172 T 10-03-2017 IPR005992 IMP dehydrogenase-related 2 GO:0016491|GO:0055114 CpPa04_RS02175 cc9637478070ad194ff597fe8abd7ff7 380 Gene3D G3DSA:3.20.20.70 12 88 7.8E-69 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS02175 cc9637478070ad194ff597fe8abd7ff7 380 Gene3D G3DSA:3.20.20.70 130 380 7.8E-69 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS02175 cc9637478070ad194ff597fe8abd7ff7 380 SMART SM01240 15 380 3.7E-13 T 10-03-2017 CpPa04_RS02175 cc9637478070ad194ff597fe8abd7ff7 380 SUPERFAMILY SSF51412 123 379 1.83E-57 T 10-03-2017 CpPa04_RS02175 cc9637478070ad194ff597fe8abd7ff7 380 SUPERFAMILY SSF51412 11 78 1.83E-57 T 10-03-2017 CpPa04_RS07595 864be224fc020ffe3bec7c5d5dc871cd 145 Pfam PF11253 Protein of unknown function (DUF3052) 20 141 2.1E-51 T 10-03-2017 IPR021412 Protein of unknown function DUF3052 CpPa04_RS00185 ddecbe9a205f3b35eda036f20e0e037a 159 SUPERFAMILY SSF49879 52 156 4.78E-24 T 10-03-2017 IPR008984 SMAD/FHA domain GO:0005515 CpPa04_RS00185 ddecbe9a205f3b35eda036f20e0e037a 159 Gene3D G3DSA:2.60.200.20 58 157 9.5E-23 T 10-03-2017 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CpPa04_RS00185 ddecbe9a205f3b35eda036f20e0e037a 159 Pfam PF00498 FHA domain 87 151 5.6E-16 T 10-03-2017 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CpPa04_RS00185 ddecbe9a205f3b35eda036f20e0e037a 159 SMART SM00240 86 136 1.9E-10 T 10-03-2017 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CpPa04_RS09450 a3eaf7875c2c78a288eff4b6ce6f0dbe 90 Pfam PF13396 Phospholipase_D-nuclease N-terminal 16 59 8.4E-5 T 10-03-2017 IPR027379 Cardiolipin synthase N-terminal CpPa04_RS08455 ac13a661735bb3a40d6c9525ea7a1fc7 573 Gene3D G3DSA:1.20.210.10 24 559 2.2E-187 T 10-03-2017 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS08455 ac13a661735bb3a40d6c9525ea7a1fc7 573 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 41 484 3.6E-147 T 10-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS08455 ac13a661735bb3a40d6c9525ea7a1fc7 573 SUPERFAMILY SSF81442 29 539 2.88E-173 T 10-03-2017 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS08455 ac13a661735bb3a40d6c9525ea7a1fc7 573 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 261 315 - T 10-03-2017 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS08455 ac13a661735bb3a40d6c9525ea7a1fc7 573 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 33 536 7.8E-209 T 10-03-2017 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 CpPa04_RS08455 ac13a661735bb3a40d6c9525ea7a1fc7 573 PRINTS PR01165 Cytochrome c oxidase subunit I signature 238 259 1.5E-95 T 10-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS08455 ac13a661735bb3a40d6c9525ea7a1fc7 573 PRINTS PR01165 Cytochrome c oxidase subunit I signature 305 320 1.5E-95 T 10-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS08455 ac13a661735bb3a40d6c9525ea7a1fc7 573 PRINTS PR01165 Cytochrome c oxidase subunit I signature 327 348 1.5E-95 T 10-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS08455 ac13a661735bb3a40d6c9525ea7a1fc7 573 PRINTS PR01165 Cytochrome c oxidase subunit I signature 105 129 1.5E-95 T 10-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS08455 ac13a661735bb3a40d6c9525ea7a1fc7 573 PRINTS PR01165 Cytochrome c oxidase subunit I signature 390 409 1.5E-95 T 10-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS08455 ac13a661735bb3a40d6c9525ea7a1fc7 573 PRINTS PR01165 Cytochrome c oxidase subunit I signature 31 56 1.5E-95 T 10-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS08455 ac13a661735bb3a40d6c9525ea7a1fc7 573 PRINTS PR01165 Cytochrome c oxidase subunit I signature 148 160 1.5E-95 T 10-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS08455 ac13a661735bb3a40d6c9525ea7a1fc7 573 PRINTS PR01165 Cytochrome c oxidase subunit I signature 440 461 1.5E-95 T 10-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS08455 ac13a661735bb3a40d6c9525ea7a1fc7 573 PRINTS PR01165 Cytochrome c oxidase subunit I signature 259 280 1.5E-95 T 10-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS08455 ac13a661735bb3a40d6c9525ea7a1fc7 573 PRINTS PR01165 Cytochrome c oxidase subunit I signature 78 101 1.5E-95 T 10-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS08455 ac13a661735bb3a40d6c9525ea7a1fc7 573 PRINTS PR01165 Cytochrome c oxidase subunit I signature 180 198 1.5E-95 T 10-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS08455 ac13a661735bb3a40d6c9525ea7a1fc7 573 PRINTS PR01165 Cytochrome c oxidase subunit I signature 362 380 1.5E-95 T 10-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS08455 ac13a661735bb3a40d6c9525ea7a1fc7 573 PRINTS PR01165 Cytochrome c oxidase subunit I signature 209 228 1.5E-95 T 10-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS04930 8e3ba6882e4f5ad4bb1057cedff4eae9 310 SUPERFAMILY SSF56349 7 301 8.54E-57 T 10-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CpPa04_RS04930 8e3ba6882e4f5ad4bb1057cedff4eae9 310 Pfam PF00589 Phage integrase family 121 295 1.2E-46 T 10-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CpPa04_RS04930 8e3ba6882e4f5ad4bb1057cedff4eae9 310 Gene3D G3DSA:1.10.443.10 120 300 1.4E-55 T 10-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CpPa04_RS04930 8e3ba6882e4f5ad4bb1057cedff4eae9 310 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 310 52.063 T 10-03-2017 IPR023009 Tyrosine recombinase XerC/XerD CpPa04_RS04930 8e3ba6882e4f5ad4bb1057cedff4eae9 310 Gene3D G3DSA:1.10.150.130 8 106 8.7E-23 T 10-03-2017 IPR023109 Integrase/recombinase, N-terminal CpPa04_RS04930 8e3ba6882e4f5ad4bb1057cedff4eae9 310 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 4 310 54.336 T 10-03-2017 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CpPa04_RS04930 8e3ba6882e4f5ad4bb1057cedff4eae9 310 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 98 2.2E-16 T 10-03-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CpPa04_RS00820 a6eb9a6171ad27d7828850ec5416f0a0 255 PIRSF PIRSF005426 8 255 1.9E-80 T 10-03-2017 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 CpPa04_RS00820 a6eb9a6171ad27d7828850ec5416f0a0 255 Pfam PF00881 Nitroreductase family 19 69 8.2E-8 T 10-03-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 CpPa04_RS00820 a6eb9a6171ad27d7828850ec5416f0a0 255 Pfam PF00881 Nitroreductase family 74 171 6.1E-9 T 10-03-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 CpPa04_RS00820 a6eb9a6171ad27d7828850ec5416f0a0 255 SUPERFAMILY SSF55469 9 254 8.9E-58 T 10-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CpPa04_RS00820 a6eb9a6171ad27d7828850ec5416f0a0 255 Gene3D G3DSA:3.40.109.10 9 254 6.1E-58 T 10-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CpPa04_RS03955 7209323fbb9f517d4ab7602861b75820 304 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 112 151 3.4E-15 T 10-03-2017 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 CpPa04_RS03955 7209323fbb9f517d4ab7602861b75820 304 SUPERFAMILY SSF51161 72 269 7.07E-16 T 10-03-2017 IPR011004 Trimeric LpxA-like CpPa04_RS03955 7209323fbb9f517d4ab7602861b75820 304 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 230 262 3.1E-9 T 10-03-2017 IPR001451 Hexapeptide repeat CpPa04_RS03955 7209323fbb9f517d4ab7602861b75820 304 Gene3D G3DSA:2.160.10.10 153 274 2.8E-12 T 10-03-2017 CpPa04_RS09620 6695f25e980e36e595446c97b954db57 345 SUPERFAMILY SSF50129 4 188 1.02E-49 T 10-03-2017 IPR011032 GroES-like CpPa04_RS09620 6695f25e980e36e595446c97b954db57 345 Gene3D G3DSA:3.90.180.10 4 176 6.4E-62 T 10-03-2017 IPR011032 GroES-like CpPa04_RS09620 6695f25e980e36e595446c97b954db57 345 Gene3D G3DSA:3.40.50.720 177 293 8.6E-34 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS09620 6695f25e980e36e595446c97b954db57 345 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 141 5.0E-32 T 10-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CpPa04_RS09620 6695f25e980e36e595446c97b954db57 345 Pfam PF00107 Zinc-binding dehydrogenase 183 308 7.6E-32 T 10-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CpPa04_RS09620 6695f25e980e36e595446c97b954db57 345 SMART SM00829 18 343 4.4E-5 T 10-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CpPa04_RS09620 6695f25e980e36e595446c97b954db57 345 SUPERFAMILY SSF51735 147 314 8.01E-45 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS05235 e3485787e4ec055960c1aa15697c5297 380 Gene3D G3DSA:3.40.350.10 7 146 2.3E-14 T 10-03-2017 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CpPa04_RS05235 e3485787e4ec055960c1aa15697c5297 380 Pfam PF01321 Creatinase/Prolidase N-terminal domain 17 150 6.4E-12 T 10-03-2017 IPR000587 Creatinase, N-terminal GO:0016787 CpPa04_RS05235 e3485787e4ec055960c1aa15697c5297 380 SUPERFAMILY SSF53092 6 136 4.45E-15 T 10-03-2017 IPR028980 Creatinase/Aminopeptidase P, N-terminal CpPa04_RS05235 e3485787e4ec055960c1aa15697c5297 380 SUPERFAMILY SSF55920 153 379 4.06E-66 T 10-03-2017 IPR000994 Peptidase M24, structural domain CpPa04_RS05235 e3485787e4ec055960c1aa15697c5297 380 Gene3D G3DSA:3.90.230.10 154 379 1.7E-68 T 10-03-2017 IPR000994 Peptidase M24, structural domain CpPa04_RS05235 e3485787e4ec055960c1aa15697c5297 380 Pfam PF00557 Metallopeptidase family M24 161 366 1.4E-55 T 10-03-2017 IPR000994 Peptidase M24, structural domain CpPa04_RS07755 c66fe108e11ddea0209fced0df72f3e2 345 Gene3D G3DSA:3.30.1370.10 17 76 4.3E-4 T 10-03-2017 IPR004088 K Homology domain, type 1 GO:0003723 CpPa04_RS07755 c66fe108e11ddea0209fced0df72f3e2 345 Gene3D G3DSA:3.40.50.300 121 324 3.9E-97 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07755 c66fe108e11ddea0209fced0df72f3e2 345 SMART SM00322 15 78 0.003 T 10-03-2017 IPR004087 K Homology domain GO:0003676 CpPa04_RS07755 c66fe108e11ddea0209fced0df72f3e2 345 SUPERFAMILY SSF52540 121 283 1.55E-37 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07755 c66fe108e11ddea0209fced0df72f3e2 345 Pfam PF02562 PhoH-like protein 122 325 5.1E-93 T 10-03-2017 IPR003714 PhoH-like protein GO:0005524 CpPa04_RS07755 c66fe108e11ddea0209fced0df72f3e2 345 SUPERFAMILY SSF54791 16 77 4.82E-6 T 10-03-2017 IPR004088 K Homology domain, type 1 GO:0003723 CpPa04_RS10470 7faf66deb9c3efc825e1f410bb3e1bc5 258 SMART SM00345 14 73 2.7E-19 T 10-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CpPa04_RS10470 7faf66deb9c3efc825e1f410bb3e1bc5 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 73 3.1E-18 T 10-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CpPa04_RS10470 7faf66deb9c3efc825e1f410bb3e1bc5 258 SUPERFAMILY SSF46785 15 86 3.76E-19 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS10470 7faf66deb9c3efc825e1f410bb3e1bc5 258 Gene3D G3DSA:1.20.120.530 99 235 1.3E-15 T 10-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal CpPa04_RS10470 7faf66deb9c3efc825e1f410bb3e1bc5 258 SMART SM00895 102 225 5.1E-4 T 10-03-2017 IPR011711 GntR, C-terminal CpPa04_RS10470 7faf66deb9c3efc825e1f410bb3e1bc5 258 Pfam PF07729 FCD domain 104 223 8.2E-15 T 10-03-2017 IPR011711 GntR, C-terminal CpPa04_RS10470 7faf66deb9c3efc825e1f410bb3e1bc5 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 2.4E-6 T 10-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CpPa04_RS10470 7faf66deb9c3efc825e1f410bb3e1bc5 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 2.4E-6 T 10-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CpPa04_RS10470 7faf66deb9c3efc825e1f410bb3e1bc5 258 Gene3D G3DSA:1.10.10.10 15 75 1.3E-20 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS10470 7faf66deb9c3efc825e1f410bb3e1bc5 258 SUPERFAMILY SSF48008 99 229 6.02E-16 T 10-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal CpPa04_RS02070 cd7556ff9eb6ada8823507d7f9d4be79 177 Gene3D G3DSA:3.30.230.10 53 177 1.0E-46 T 10-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CpPa04_RS02070 cd7556ff9eb6ada8823507d7f9d4be79 177 ProSitePatterns PS00360 Ribosomal protein S9 signature. 116 134 - T 10-03-2017 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 CpPa04_RS02070 cd7556ff9eb6ada8823507d7f9d4be79 177 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 48 177 30.502 T 10-03-2017 IPR023035 Ribosomal protein S9, bacterial/plastid CpPa04_RS02070 cd7556ff9eb6ada8823507d7f9d4be79 177 SUPERFAMILY SSF54211 53 177 9.48E-43 T 10-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CpPa04_RS02070 cd7556ff9eb6ada8823507d7f9d4be79 177 Pfam PF00380 Ribosomal protein S9/S16 57 177 9.0E-42 T 10-03-2017 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 CpPa04_RS09600 2633bfb505274682e19a4d919c5c39a0 563 SUPERFAMILY SSF111369 300 426 2.22E-6 T 10-03-2017 CpPa04_RS09600 2633bfb505274682e19a4d919c5c39a0 563 SUPERFAMILY SSF111369 65 145 1.83E-5 T 10-03-2017 CpPa04_RS09600 2633bfb505274682e19a4d919c5c39a0 563 Pfam PF13437 HlyD family secretion protein 356 458 3.7E-12 T 10-03-2017 CpPa04_RS09600 2633bfb505274682e19a4d919c5c39a0 563 Gene3D G3DSA:2.40.50.100 353 382 8.4E-8 T 10-03-2017 CpPa04_RS09600 2633bfb505274682e19a4d919c5c39a0 563 Gene3D G3DSA:2.40.50.100 74 106 8.4E-8 T 10-03-2017 CpPa04_RS03355 a5c60d7586175c989414a1fe3a554362 230 Gene3D G3DSA:3.40.50.2300 1 120 6.8E-43 T 10-03-2017 CpPa04_RS03355 a5c60d7586175c989414a1fe3a554362 230 SMART SM00448 1 112 1.2E-46 T 10-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CpPa04_RS03355 a5c60d7586175c989414a1fe3a554362 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 2.8E-26 T 10-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CpPa04_RS03355 a5c60d7586175c989414a1fe3a554362 230 Pfam PF00072 Response regulator receiver domain 3 113 1.2E-31 T 10-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CpPa04_RS03355 a5c60d7586175c989414a1fe3a554362 230 Gene3D G3DSA:1.10.10.10 128 227 7.1E-36 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS03355 a5c60d7586175c989414a1fe3a554362 230 SMART SM00862 150 225 1.3E-27 T 10-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CpPa04_RS03355 a5c60d7586175c989414a1fe3a554362 230 SUPERFAMILY SSF52172 1 184 4.27E-44 T 10-03-2017 IPR011006 CheY-like superfamily CpPa04_RS04355 121bc351bb3857ceee9e977fce55db8a 732 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 633 729 1.3E-18 T 10-03-2017 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 CpPa04_RS04355 121bc351bb3857ceee9e977fce55db8a 732 SUPERFAMILY SSF81296 21 116 4.9E-13 T 10-03-2017 IPR014756 Immunoglobulin E-set CpPa04_RS04355 121bc351bb3857ceee9e977fce55db8a 732 Gene3D G3DSA:3.20.20.80 246 615 1.3E-91 T 10-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CpPa04_RS04355 121bc351bb3857ceee9e977fce55db8a 732 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 112 724 8.5E-262 T 10-03-2017 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 CpPa04_RS04355 121bc351bb3857ceee9e977fce55db8a 732 SUPERFAMILY SSF51445 187 621 6.57E-111 T 10-03-2017 IPR017853 Glycoside hydrolase superfamily CpPa04_RS04355 121bc351bb3857ceee9e977fce55db8a 732 PIRSF PIRSF000463 11 732 1.3E-276 T 10-03-2017 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 CpPa04_RS04355 121bc351bb3857ceee9e977fce55db8a 732 Gene3D G3DSA:2.60.40.10 117 229 1.0E-35 T 10-03-2017 IPR013783 Immunoglobulin-like fold CpPa04_RS04355 121bc351bb3857ceee9e977fce55db8a 732 Gene3D G3DSA:2.60.40.10 22 109 4.1E-9 T 10-03-2017 IPR013783 Immunoglobulin-like fold CpPa04_RS04355 121bc351bb3857ceee9e977fce55db8a 732 Pfam PF00128 Alpha amylase, catalytic domain 378 579 2.9E-4 T 10-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CpPa04_RS04355 121bc351bb3857ceee9e977fce55db8a 732 Pfam PF00128 Alpha amylase, catalytic domain 277 349 6.3E-8 T 10-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CpPa04_RS04355 121bc351bb3857ceee9e977fce55db8a 732 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 128 214 1.4E-20 T 10-03-2017 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 CpPa04_RS04355 121bc351bb3857ceee9e977fce55db8a 732 Gene3D G3DSA:2.60.40.1180 628 729 2.6E-30 T 10-03-2017 IPR013780 Glycosyl hydrolase, all-beta CpPa04_RS04355 121bc351bb3857ceee9e977fce55db8a 732 SUPERFAMILY SSF81296 146 201 8.4E-10 T 10-03-2017 IPR014756 Immunoglobulin E-set CpPa04_RS04355 121bc351bb3857ceee9e977fce55db8a 732 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 104 731 42.833 T 10-03-2017 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 CpPa04_RS04355 121bc351bb3857ceee9e977fce55db8a 732 SMART SM00642 225 608 1.8E-7 T 10-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CpPa04_RS04355 121bc351bb3857ceee9e977fce55db8a 732 SUPERFAMILY SSF51011 628 730 1.6E-29 T 10-03-2017 CpPa04_RS05875 854650909216f751e8aa685a3da3eab6 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 5.3E-5 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS05875 854650909216f751e8aa685a3da3eab6 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 5.3E-5 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS05875 854650909216f751e8aa685a3da3eab6 200 SUPERFAMILY SSF46689 1 75 3.94E-13 T 10-03-2017 IPR009057 Homeodomain-like GO:0003677 CpPa04_RS05875 854650909216f751e8aa685a3da3eab6 200 Gene3D G3DSA:1.10.357.10 1 192 8.3E-21 T 10-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CpPa04_RS05875 854650909216f751e8aa685a3da3eab6 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 56 5.9E-8 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS05875 854650909216f751e8aa685a3da3eab6 200 SUPERFAMILY SSF48498 83 188 2.62E-14 T 10-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CpPa04_RS07235 a5894a39c071ac879c1a0c832257ad01 143 Pfam PF12270 Cytochrome c oxidase subunit IV 1 136 3.6E-33 T 10-03-2017 IPR021050 Cytochrome c oxidase subunit IV, actinobacteria GO:0004129|GO:0016021|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 CpPa04_RS07235 a5894a39c071ac879c1a0c832257ad01 143 PIRSF PIRSF017385 1 143 7.7E-47 T 10-03-2017 IPR021050 Cytochrome c oxidase subunit IV, actinobacteria GO:0004129|GO:0016021|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 CpPa04_RS03710 86c9bfc484c1ad7b6a721711d0c5c0ec 566 Pfam PF07690 Major Facilitator Superfamily 48 441 4.0E-57 T 10-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CpPa04_RS03710 86c9bfc484c1ad7b6a721711d0c5c0ec 566 Gene3D G3DSA:1.20.1250.20 294 452 4.3E-21 T 10-03-2017 CpPa04_RS03710 86c9bfc484c1ad7b6a721711d0c5c0ec 566 Gene3D G3DSA:1.20.1250.20 39 217 1.4E-33 T 10-03-2017 CpPa04_RS03710 86c9bfc484c1ad7b6a721711d0c5c0ec 566 Gene3D G3DSA:1.20.1250.20 509 537 4.3E-21 T 10-03-2017 CpPa04_RS03710 86c9bfc484c1ad7b6a721711d0c5c0ec 566 SUPERFAMILY SSF103473 278 450 5.49E-71 T 10-03-2017 IPR020846 Major facilitator superfamily domain CpPa04_RS03710 86c9bfc484c1ad7b6a721711d0c5c0ec 566 SUPERFAMILY SSF103473 507 535 5.49E-71 T 10-03-2017 IPR020846 Major facilitator superfamily domain CpPa04_RS03710 86c9bfc484c1ad7b6a721711d0c5c0ec 566 SUPERFAMILY SSF103473 29 222 5.49E-71 T 10-03-2017 IPR020846 Major facilitator superfamily domain CpPa04_RS03710 86c9bfc484c1ad7b6a721711d0c5c0ec 566 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 44 511 4.1E-81 T 10-03-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 CpPa04_RS03710 86c9bfc484c1ad7b6a721711d0c5c0ec 566 PRINTS PR01036 Tetracycline resistance protein TetB signature 431 450 2.5E-11 T 10-03-2017 CpPa04_RS03710 86c9bfc484c1ad7b6a721711d0c5c0ec 566 PRINTS PR01036 Tetracycline resistance protein TetB signature 232 250 2.5E-11 T 10-03-2017 CpPa04_RS03710 86c9bfc484c1ad7b6a721711d0c5c0ec 566 PRINTS PR01036 Tetracycline resistance protein TetB signature 46 70 2.5E-11 T 10-03-2017 CpPa04_RS03710 86c9bfc484c1ad7b6a721711d0c5c0ec 566 PRINTS PR01036 Tetracycline resistance protein TetB signature 136 156 2.5E-11 T 10-03-2017 CpPa04_RS03710 86c9bfc484c1ad7b6a721711d0c5c0ec 566 PRINTS PR01036 Tetracycline resistance protein TetB signature 166 190 2.5E-11 T 10-03-2017 CpPa04_RS06460 91f1ddf31b5592c59591488356043343 332 Gene3D G3DSA:3.40.50.620 9 185 9.1E-61 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS06460 91f1ddf31b5592c59591488356043343 332 Pfam PF01687 Riboflavin kinase 190 324 1.6E-33 T 10-03-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CpPa04_RS06460 91f1ddf31b5592c59591488356043343 332 Gene3D G3DSA:2.40.30.30 186 325 5.8E-45 T 10-03-2017 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 CpPa04_RS06460 91f1ddf31b5592c59591488356043343 332 SUPERFAMILY SSF52374 23 183 4.83E-33 T 10-03-2017 CpPa04_RS06460 91f1ddf31b5592c59591488356043343 332 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 24 324 1.2E-67 T 10-03-2017 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CpPa04_RS06460 91f1ddf31b5592c59591488356043343 332 Pfam PF06574 FAD synthetase 19 172 4.8E-48 T 10-03-2017 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CpPa04_RS06460 91f1ddf31b5592c59591488356043343 332 PIRSF PIRSF004491 7 331 8.3E-102 T 10-03-2017 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CpPa04_RS06460 91f1ddf31b5592c59591488356043343 332 SMART SM00904 189 325 8.0E-50 T 10-03-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CpPa04_RS06460 91f1ddf31b5592c59591488356043343 332 SUPERFAMILY SSF82114 180 325 6.76E-41 T 10-03-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CpPa04_RS01215 bd3fca1d0ed0d54c4701ca1d9c6527e6 693 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 322 401 3.3E-6 T 10-03-2017 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 CpPa04_RS01215 bd3fca1d0ed0d54c4701ca1d9c6527e6 693 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 25 223 1.5E-10 T 10-03-2017 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 CpPa04_RS01215 bd3fca1d0ed0d54c4701ca1d9c6527e6 693 Gene3D G3DSA:2.130.10.120 67 223 2.1E-4 T 10-03-2017 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 CpPa04_RS01215 bd3fca1d0ed0d54c4701ca1d9c6527e6 693 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 449 467 2.9E-36 T 10-03-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CpPa04_RS01215 bd3fca1d0ed0d54c4701ca1d9c6527e6 693 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 476 500 2.9E-36 T 10-03-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CpPa04_RS01215 bd3fca1d0ed0d54c4701ca1d9c6527e6 693 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 587 602 2.9E-36 T 10-03-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CpPa04_RS01215 bd3fca1d0ed0d54c4701ca1d9c6527e6 693 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 504 523 2.9E-36 T 10-03-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CpPa04_RS01215 bd3fca1d0ed0d54c4701ca1d9c6527e6 693 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 532 552 2.9E-36 T 10-03-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CpPa04_RS01215 bd3fca1d0ed0d54c4701ca1d9c6527e6 693 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 608 630 2.9E-36 T 10-03-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CpPa04_RS01215 bd3fca1d0ed0d54c4701ca1d9c6527e6 693 SUPERFAMILY SSF53474 420 674 5.98E-48 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS01215 bd3fca1d0ed0d54c4701ca1d9c6527e6 693 Pfam PF00326 Prolyl oligopeptidase family 474 676 1.5E-42 T 10-03-2017 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CpPa04_RS01215 bd3fca1d0ed0d54c4701ca1d9c6527e6 693 SUPERFAMILY SSF50993 24 401 5.49E-40 T 10-03-2017 CpPa04_RS01215 bd3fca1d0ed0d54c4701ca1d9c6527e6 693 Gene3D G3DSA:3.40.50.1820 344 674 1.8E-80 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS09550 03c86ca0ad3b61c4f97134dc33c04f4f 269 SUPERFAMILY SSF57997 94 228 9.15E-8 T 10-03-2017 CpPa04_RS09550 03c86ca0ad3b61c4f97134dc33c04f4f 269 Gene3D G3DSA:1.10.601.10 87 223 2.0E-4 T 10-03-2017 CpPa04_RS10610 2a34130b71091457bc4c8749846a9a82 322 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 10 315 6.7E-87 T 10-03-2017 IPR016833 Putative sodium bile acid cotransporter CpPa04_RS10610 2a34130b71091457bc4c8749846a9a82 322 PIRSF PIRSF026166 1 321 1.8E-118 T 10-03-2017 IPR016833 Putative sodium bile acid cotransporter CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 310 324 - T 10-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.1E-75 T 10-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 PRINTS PR00301 70kDa heat shock protein signature 362 381 2.1E-75 T 10-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 PRINTS PR00301 70kDa heat shock protein signature 114 134 2.1E-75 T 10-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 PRINTS PR00301 70kDa heat shock protein signature 443 459 2.1E-75 T 10-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.1E-75 T 10-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 PRINTS PR00301 70kDa heat shock protein signature 307 323 2.1E-75 T 10-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 PRINTS PR00301 70kDa heat shock protein signature 339 359 2.1E-75 T 10-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 PRINTS PR00301 70kDa heat shock protein signature 174 184 2.1E-75 T 10-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.1E-75 T 10-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 Gene3D G3DSA:3.30.30.30 39 100 4.5E-17 T 10-03-2017 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 605 35.813 T 10-03-2017 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 Gene3D G3DSA:3.30.420.40 167 201 8.1E-34 T 10-03-2017 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 Gene3D G3DSA:3.30.420.40 292 333 8.1E-34 T 10-03-2017 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 Gene3D G3DSA:1.20.1270.10 507 577 5.8E-24 T 10-03-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 SUPERFAMILY SSF53067 2 159 5.51E-58 T 10-03-2017 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 SUPERFAMILY SSF53067 162 356 6.09E-63 T 10-03-2017 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 10-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 Gene3D G3DSA:3.90.640.10 202 288 2.7E-28 T 10-03-2017 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 Pfam PF00012 Hsp70 protein 4 78 6.6E-29 T 10-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 Pfam PF00012 Hsp70 protein 80 578 7.2E-218 T 10-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 Gene3D G3DSA:3.30.420.40 101 166 6.3E-57 T 10-03-2017 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 Gene3D G3DSA:3.30.420.40 4 38 6.3E-57 T 10-03-2017 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 SUPERFAMILY SSF100920 358 514 7.32E-63 T 10-03-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 4 577 2.4E-274 T 10-03-2017 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 168 181 - T 10-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 Gene3D G3DSA:2.60.34.10 364 506 2.1E-73 T 10-03-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CpPa04_RS09655 de4315f57c9e4a0923f4cc4bff482a77 610 SUPERFAMILY SSF100934 481 581 1.29E-16 T 10-03-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 CpPa04_RS03575 ad9ef011f7952a4625128c535892f660 325 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 14 323 9.7E-117 T 10-03-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CpPa04_RS03575 ad9ef011f7952a4625128c535892f660 325 SMART SM01400 13 129 1.7E-69 T 10-03-2017 CpPa04_RS03575 ad9ef011f7952a4625128c535892f660 325 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 137 152 - T 10-03-2017 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 CpPa04_RS03575 ad9ef011f7952a4625128c535892f660 325 Pfam PF00156 Phosphoribosyl transferase domain 164 284 1.5E-18 T 10-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 CpPa04_RS03575 ad9ef011f7952a4625128c535892f660 325 SUPERFAMILY SSF53271 78 314 2.26E-63 T 10-03-2017 IPR029057 Phosphoribosyltransferase-like CpPa04_RS03575 ad9ef011f7952a4625128c535892f660 325 Gene3D G3DSA:3.40.50.2020 168 291 5.2E-46 T 10-03-2017 IPR029057 Phosphoribosyltransferase-like CpPa04_RS03575 ad9ef011f7952a4625128c535892f660 325 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 13 323 44.819 T 10-03-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CpPa04_RS03575 ad9ef011f7952a4625128c535892f660 325 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 13 129 1.4E-43 T 10-03-2017 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CpPa04_RS03575 ad9ef011f7952a4625128c535892f660 325 Gene3D G3DSA:3.40.50.2020 9 167 4.1E-72 T 10-03-2017 IPR029057 Phosphoribosyltransferase-like CpPa04_RS06645 9ecb81d6b584eb728d66ac2d1df7785c 185 Pfam PF01765 Ribosome recycling factor 21 183 2.8E-61 T 10-03-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 CpPa04_RS06645 9ecb81d6b584eb728d66ac2d1df7785c 185 SUPERFAMILY SSF55194 3 184 2.49E-68 T 10-03-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 CpPa04_RS06645 9ecb81d6b584eb728d66ac2d1df7785c 185 Gene3D G3DSA:1.10.132.20 66 185 4.8E-42 T 10-03-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 CpPa04_RS06645 9ecb81d6b584eb728d66ac2d1df7785c 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.346 T 10-03-2017 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CpPa04_RS06645 9ecb81d6b584eb728d66ac2d1df7785c 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 2.7E-62 T 10-03-2017 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CpPa04_RS05435 97569a552b38fe102bd2b7b30fca9e87 603 SUPERFAMILY SSF51703 41 512 3.61E-123 T 10-03-2017 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CpPa04_RS05435 97569a552b38fe102bd2b7b30fca9e87 603 Gene3D G3DSA:3.20.20.240 49 471 2.0E-106 T 10-03-2017 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CpPa04_RS05435 97569a552b38fe102bd2b7b30fca9e87 603 Gene3D G3DSA:3.40.50.280 475 602 3.4E-33 T 10-03-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CpPa04_RS05435 97569a552b38fe102bd2b7b30fca9e87 603 Pfam PF01642 Methylmalonyl-CoA mutase 49 514 1.0E-101 T 10-03-2017 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CpPa04_RS02040 71b6ca9a1cabfdd60a655c225956f158 478 TIGRFAM TIGR03920 T7SS_EccD: type VII secretion integral membrane protein EccD 34 476 6.6E-54 T 10-03-2017 IPR006707 Type VII secretion system membrane protein EccD CpPa04_RS03695 78f492c7440e43e94c24d3c80e675d4e 166 Pfam PF12724 Flavodoxin domain 4 121 1.8E-12 T 10-03-2017 IPR026816 Flavodoxin domain CpPa04_RS03695 78f492c7440e43e94c24d3c80e675d4e 166 SUPERFAMILY SSF52218 2 58 5.24E-5 T 10-03-2017 IPR029039 Flavoprotein-like domain CpPa04_RS02115 e86314d824a53ace9209ac1d18a142a4 535 Gene3D G3DSA:3.30.70.1450 280 347 3.0E-6 T 10-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CpPa04_RS02115 e86314d824a53ace9209ac1d18a142a4 535 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 365 518 1.8E-45 T 10-03-2017 IPR006512 YidE/YbjL duplication CpPa04_RS02115 e86314d824a53ace9209ac1d18a142a4 535 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 17 160 4.8E-22 T 10-03-2017 IPR006512 YidE/YbjL duplication CpPa04_RS02115 e86314d824a53ace9209ac1d18a142a4 535 Pfam PF02080 TrkA-C domain 281 347 6.9E-12 T 10-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CpPa04_RS02115 e86314d824a53ace9209ac1d18a142a4 535 SUPERFAMILY SSF116726 268 347 5.89E-10 T 10-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CpPa04_RS02115 e86314d824a53ace9209ac1d18a142a4 535 ProSitePatterns PS01054 Transaldolase signature 1. 488 496 - T 10-03-2017 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 CpPa04_RS02115 e86314d824a53ace9209ac1d18a142a4 535 Pfam PF06826 Predicted Permease Membrane Region 361 531 3.3E-37 T 10-03-2017 IPR006512 YidE/YbjL duplication CpPa04_RS02115 e86314d824a53ace9209ac1d18a142a4 535 Pfam PF06826 Predicted Permease Membrane Region 13 172 4.8E-30 T 10-03-2017 IPR006512 YidE/YbjL duplication CpPa04_RS04840 d910ab5c7ef049a7e27f46fabd272ae8 333 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 21 159 1.1E-40 T 10-03-2017 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CpPa04_RS04840 d910ab5c7ef049a7e27f46fabd272ae8 333 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 172 325 1.4E-52 T 10-03-2017 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CpPa04_RS04840 d910ab5c7ef049a7e27f46fabd272ae8 333 Gene3D G3DSA:3.40.50.1370 20 155 2.0E-46 T 10-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CpPa04_RS04840 d910ab5c7ef049a7e27f46fabd272ae8 333 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 64 71 - T 10-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CpPa04_RS04840 d910ab5c7ef049a7e27f46fabd272ae8 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 95 108 3.8E-26 T 10-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CpPa04_RS04840 d910ab5c7ef049a7e27f46fabd272ae8 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 62 76 3.8E-26 T 10-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CpPa04_RS04840 d910ab5c7ef049a7e27f46fabd272ae8 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 135 149 3.8E-26 T 10-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CpPa04_RS04840 d910ab5c7ef049a7e27f46fabd272ae8 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 244 254 3.8E-26 T 10-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CpPa04_RS04840 d910ab5c7ef049a7e27f46fabd272ae8 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 306 317 3.8E-26 T 10-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CpPa04_RS04840 d910ab5c7ef049a7e27f46fabd272ae8 333 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 20 328 70.654 T 10-03-2017 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CpPa04_RS04840 d910ab5c7ef049a7e27f46fabd272ae8 333 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 292 315 8.1E-26 T 10-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CpPa04_RS04840 d910ab5c7ef049a7e27f46fabd272ae8 333 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 146 157 8.1E-26 T 10-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CpPa04_RS04840 d910ab5c7ef049a7e27f46fabd272ae8 333 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 280 289 8.1E-26 T 10-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CpPa04_RS04840 d910ab5c7ef049a7e27f46fabd272ae8 333 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 64 83 8.1E-26 T 10-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CpPa04_RS04840 d910ab5c7ef049a7e27f46fabd272ae8 333 SUPERFAMILY SSF53671 20 328 3.27E-92 T 10-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CpPa04_RS04840 d910ab5c7ef049a7e27f46fabd272ae8 333 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 21 327 1.0E-101 T 10-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CpPa04_RS04840 d910ab5c7ef049a7e27f46fabd272ae8 333 Gene3D G3DSA:3.40.50.1370 156 314 3.2E-59 T 10-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CpPa04_RS05700 558f21ed2416276ef2df4ad0d0ba6fcc 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 8 157 2.4E-43 T 10-03-2017 IPR023635 Peptide deformylase CpPa04_RS05700 558f21ed2416276ef2df4ad0d0ba6fcc 169 SUPERFAMILY SSF56420 3 166 8.11E-55 T 10-03-2017 IPR023635 Peptide deformylase CpPa04_RS05700 558f21ed2416276ef2df4ad0d0ba6fcc 169 Pfam PF01327 Polypeptide deformylase 4 154 8.1E-46 T 10-03-2017 IPR023635 Peptide deformylase CpPa04_RS05700 558f21ed2416276ef2df4ad0d0ba6fcc 169 PRINTS PR01576 Peptide deformylase signature 91 102 4.2E-34 T 10-03-2017 IPR023635 Peptide deformylase CpPa04_RS05700 558f21ed2416276ef2df4ad0d0ba6fcc 169 PRINTS PR01576 Peptide deformylase signature 33 62 4.2E-34 T 10-03-2017 IPR023635 Peptide deformylase CpPa04_RS05700 558f21ed2416276ef2df4ad0d0ba6fcc 169 PRINTS PR01576 Peptide deformylase signature 103 121 4.2E-34 T 10-03-2017 IPR023635 Peptide deformylase CpPa04_RS05700 558f21ed2416276ef2df4ad0d0ba6fcc 169 PRINTS PR01576 Peptide deformylase signature 122 151 4.2E-34 T 10-03-2017 IPR023635 Peptide deformylase CpPa04_RS05700 558f21ed2416276ef2df4ad0d0ba6fcc 169 Hamap MF_00163 Peptide deformylase [def]. 2 164 27.258 T 10-03-2017 IPR023635 Peptide deformylase CpPa04_RS05700 558f21ed2416276ef2df4ad0d0ba6fcc 169 Gene3D G3DSA:3.90.45.10 5 166 1.6E-59 T 10-03-2017 IPR023635 Peptide deformylase CpPa04_RS05700 558f21ed2416276ef2df4ad0d0ba6fcc 169 PIRSF PIRSF004749 2 167 2.3E-47 T 10-03-2017 IPR023635 Peptide deformylase CpPa04_RS05240 5d2e089c41c7f51de75e598976796895 918 Pfam PF00271 Helicase conserved C-terminal domain 355 432 2.5E-5 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS05240 5d2e089c41c7f51de75e598976796895 918 Gene3D G3DSA:3.40.50.300 355 437 9.1E-18 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05240 5d2e089c41c7f51de75e598976796895 918 Gene3D G3DSA:3.40.50.300 279 313 9.1E-18 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05240 5d2e089c41c7f51de75e598976796895 918 SUPERFAMILY SSF52540 352 445 9.71E-40 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05240 5d2e089c41c7f51de75e598976796895 918 SUPERFAMILY SSF52540 32 173 9.71E-40 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05240 5d2e089c41c7f51de75e598976796895 918 SUPERFAMILY SSF52540 269 310 9.71E-40 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05240 5d2e089c41c7f51de75e598976796895 918 Pfam PF08148 DSHCT (NUC185) domain 748 914 6.4E-34 T 10-03-2017 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal CpPa04_RS05240 5d2e089c41c7f51de75e598976796895 918 SMART SM00487 18 202 8.8E-28 T 10-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CpPa04_RS05240 5d2e089c41c7f51de75e598976796895 918 Pfam PF00270 DEAD/DEAH box helicase 24 171 1.9E-16 T 10-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CpPa04_RS05240 5d2e089c41c7f51de75e598976796895 918 SMART SM01142 744 918 7.2E-49 T 10-03-2017 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal CpPa04_RS05240 5d2e089c41c7f51de75e598976796895 918 SMART SM00490 346 432 5.2E-13 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS05240 5d2e089c41c7f51de75e598976796895 918 Pfam PF13234 rRNA-processing arch domain 489 664 2.6E-6 T 10-03-2017 IPR025696 rRNA-processing arch domain CpPa04_RS05240 5d2e089c41c7f51de75e598976796895 918 Gene3D G3DSA:3.40.50.300 21 199 1.3E-32 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08960 a2c5a8541ee3fd1673e9622c9f754af2 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 4.9E-25 T 10-03-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CpPa04_RS08960 a2c5a8541ee3fd1673e9622c9f754af2 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 4.9E-25 T 10-03-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CpPa04_RS08960 a2c5a8541ee3fd1673e9622c9f754af2 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 194 212 4.9E-25 T 10-03-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CpPa04_RS08960 a2c5a8541ee3fd1673e9622c9f754af2 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 225 246 4.9E-25 T 10-03-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CpPa04_RS08960 a2c5a8541ee3fd1673e9622c9f754af2 465 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 459 3.0E-131 T 10-03-2017 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CpPa04_RS08960 a2c5a8541ee3fd1673e9622c9f754af2 465 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 462 34.986 T 10-03-2017 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CpPa04_RS08960 a2c5a8541ee3fd1673e9622c9f754af2 465 SMART SM00840 339 400 2.4E-13 T 10-03-2017 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CpPa04_RS08960 a2c5a8541ee3fd1673e9622c9f754af2 465 Gene3D G3DSA:1.20.120.640 309 391 4.1E-14 T 10-03-2017 CpPa04_RS08960 a2c5a8541ee3fd1673e9622c9f754af2 465 Pfam PF09190 DALR domain 339 392 2.3E-9 T 10-03-2017 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CpPa04_RS08960 a2c5a8541ee3fd1673e9622c9f754af2 465 SUPERFAMILY SSF52374 4 314 4.83E-85 T 10-03-2017 CpPa04_RS08960 a2c5a8541ee3fd1673e9622c9f754af2 465 Gene3D G3DSA:3.40.50.620 21 307 7.4E-97 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS08960 a2c5a8541ee3fd1673e9622c9f754af2 465 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 16 314 1.5E-117 T 10-03-2017 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 CpPa04_RS08960 a2c5a8541ee3fd1673e9622c9f754af2 465 SUPERFAMILY SSF47323 321 460 1.31E-31 T 10-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS02955 af2facc07b18dcb0595a3c5cd7a9a96f 240 Pfam PF00484 Carbonic anhydrase 73 227 5.1E-41 T 10-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CpPa04_RS02955 af2facc07b18dcb0595a3c5cd7a9a96f 240 SUPERFAMILY SSF53056 38 239 6.8E-52 T 10-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CpPa04_RS02955 af2facc07b18dcb0595a3c5cd7a9a96f 240 Gene3D G3DSA:3.40.1050.10 41 239 1.3E-57 T 10-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CpPa04_RS02955 af2facc07b18dcb0595a3c5cd7a9a96f 240 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 78 85 - T 10-03-2017 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CpPa04_RS02955 af2facc07b18dcb0595a3c5cd7a9a96f 240 SMART SM00947 66 231 2.4E-44 T 10-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CpPa04_RS05895 c870e5de8ecfc82fbda884848d63b1b8 181 SUPERFAMILY SSF54637 10 158 3.46E-47 T 10-03-2017 IPR029069 HotDog domain CpPa04_RS05895 c870e5de8ecfc82fbda884848d63b1b8 181 Gene3D G3DSA:3.10.129.10 10 157 2.7E-44 T 10-03-2017 IPR029069 HotDog domain CpPa04_RS05895 c870e5de8ecfc82fbda884848d63b1b8 181 Pfam PF01575 MaoC like domain 19 133 9.5E-19 T 10-03-2017 IPR002539 MaoC-like domain CpPa04_RS04240 9b10ae1e61c2db3a378010dbde971dd3 307 Pfam PF08544 GHMP kinases C terminal 233 288 9.6E-6 T 10-03-2017 IPR013750 GHMP kinase, C-terminal domain CpPa04_RS04240 9b10ae1e61c2db3a378010dbde971dd3 307 SUPERFAMILY SSF55060 177 303 1.65E-30 T 10-03-2017 IPR013750 GHMP kinase, C-terminal domain CpPa04_RS04240 9b10ae1e61c2db3a378010dbde971dd3 307 Pfam PF00288 GHMP kinases N terminal domain 88 147 2.5E-12 T 10-03-2017 IPR006204 GHMP kinase N-terminal domain GO:0005524 CpPa04_RS04240 9b10ae1e61c2db3a378010dbde971dd3 307 Hamap MF_00384 Homoserine kinase [thrB]. 11 305 28.569 T 10-03-2017 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CpPa04_RS04240 9b10ae1e61c2db3a378010dbde971dd3 307 TIGRFAM TIGR00191 thrB: homoserine kinase 11 280 7.0E-64 T 10-03-2017 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CpPa04_RS04240 9b10ae1e61c2db3a378010dbde971dd3 307 Gene3D G3DSA:3.30.230.10 10 155 1.1E-52 T 10-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CpPa04_RS04240 9b10ae1e61c2db3a378010dbde971dd3 307 SUPERFAMILY SSF54211 10 151 2.96E-32 T 10-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CpPa04_RS04240 9b10ae1e61c2db3a378010dbde971dd3 307 PRINTS PR00958 Homoserine kinase signature 18 33 4.4E-38 T 10-03-2017 CpPa04_RS04240 9b10ae1e61c2db3a378010dbde971dd3 307 PRINTS PR00958 Homoserine kinase signature 181 198 4.4E-38 T 10-03-2017 CpPa04_RS04240 9b10ae1e61c2db3a378010dbde971dd3 307 PRINTS PR00958 Homoserine kinase signature 258 273 4.4E-38 T 10-03-2017 CpPa04_RS04240 9b10ae1e61c2db3a378010dbde971dd3 307 PRINTS PR00958 Homoserine kinase signature 101 116 4.4E-38 T 10-03-2017 CpPa04_RS04240 9b10ae1e61c2db3a378010dbde971dd3 307 PRINTS PR00958 Homoserine kinase signature 135 148 4.4E-38 T 10-03-2017 CpPa04_RS04240 9b10ae1e61c2db3a378010dbde971dd3 307 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 94 105 - T 10-03-2017 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 CpPa04_RS04240 9b10ae1e61c2db3a378010dbde971dd3 307 Gene3D G3DSA:3.30.70.890 174 289 3.7E-34 T 10-03-2017 IPR013750 GHMP kinase, C-terminal domain CpPa04_RS04240 9b10ae1e61c2db3a378010dbde971dd3 307 PIRSF PIRSF000676 7 304 2.0E-83 T 10-03-2017 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CpPa04_RS05520 e2bd1d75e8c114109f6faeb902f7c5f4 719 SUPERFAMILY SSF49401 54 162 2.24E-13 T 10-03-2017 IPR008966 Adhesion domain CpPa04_RS05520 e2bd1d75e8c114109f6faeb902f7c5f4 719 Gene3D G3DSA:2.60.40.1280 47 162 3.6E-21 T 10-03-2017 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 CpPa04_RS00760 02cc4d759370c8dc7f03ef854393c9f5 849 SMART SM00382 34 177 3.9E-9 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS00760 02cc4d759370c8dc7f03ef854393c9f5 849 SUPERFAMILY SSF52540 31 220 3.39E-49 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00760 02cc4d759370c8dc7f03ef854393c9f5 849 Gene3D G3DSA:3.40.50.300 12 164 5.1E-59 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00760 02cc4d759370c8dc7f03ef854393c9f5 849 SUPERFAMILY SSF48019 244 361 6.38E-17 T 10-03-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CpPa04_RS00760 02cc4d759370c8dc7f03ef854393c9f5 849 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 235 360 9.4E-11 T 10-03-2017 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 CpPa04_RS00760 02cc4d759370c8dc7f03ef854393c9f5 849 Gene3D G3DSA:1.20.272.10 243 362 5.6E-14 T 10-03-2017 CpPa04_RS00760 02cc4d759370c8dc7f03ef854393c9f5 849 Pfam PF13177 DNA polymerase III, delta subunit 17 176 1.2E-39 T 10-03-2017 CpPa04_RS00760 02cc4d759370c8dc7f03ef854393c9f5 849 Gene3D G3DSA:1.10.8.60 165 242 1.3E-15 T 10-03-2017 CpPa04_RS00760 02cc4d759370c8dc7f03ef854393c9f5 849 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 2 360 1.1E-109 T 10-03-2017 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 CpPa04_RS01550 b2cd05cd4d19fff5f9a8b3ae0bd6e370 339 SUPERFAMILY SSF48576 27 337 3.02E-82 T 10-03-2017 IPR008949 Isoprenoid synthase domain CpPa04_RS01550 b2cd05cd4d19fff5f9a8b3ae0bd6e370 339 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 219 231 - T 10-03-2017 IPR000092 Polyprenyl synthetase GO:0008299 CpPa04_RS01550 b2cd05cd4d19fff5f9a8b3ae0bd6e370 339 Gene3D G3DSA:1.10.600.10 25 337 1.2E-85 T 10-03-2017 IPR008949 Isoprenoid synthase domain CpPa04_RS01550 b2cd05cd4d19fff5f9a8b3ae0bd6e370 339 Pfam PF00348 Polyprenyl synthetase 51 288 4.8E-58 T 10-03-2017 IPR000092 Polyprenyl synthetase GO:0008299 CpPa04_RS10170 ac407f9890728742dc1eaa28db98c432 520 Pfam PF13482 RNase_H superfamily 323 507 1.8E-10 T 10-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CpPa04_RS10170 ac407f9890728742dc1eaa28db98c432 520 TIGRFAM TIGR03491 TIGR03491: putative RecB family nuclease, TM0106 family 231 507 1.7E-34 T 10-03-2017 IPR019993 RecB family nuclease, TM0106, putative CpPa04_RS01660 00d633e5020806a1c0937a778a5f168d 1336 SMART SM00663 310 589 2.3E-173 T 10-03-2017 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS01660 00d633e5020806a1c0937a778a5f168d 1336 Pfam PF04997 RNA polymerase Rpb1, domain 1 7 417 2.4E-83 T 10-03-2017 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS01660 00d633e5020806a1c0937a778a5f168d 1336 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1290 0.0 T 10-03-2017 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS01660 00d633e5020806a1c0937a778a5f168d 1336 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 5 1299 9.827 T 10-03-2017 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS01660 00d633e5020806a1c0937a778a5f168d 1336 Pfam PF00623 RNA polymerase Rpb1, domain 2 419 560 1.9E-35 T 10-03-2017 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS01660 00d633e5020806a1c0937a778a5f168d 1336 Pfam PF04983 RNA polymerase Rpb1, domain 3 564 746 5.4E-23 T 10-03-2017 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS01660 00d633e5020806a1c0937a778a5f168d 1336 Gene3D G3DSA:2.40.40.20 424 451 5.1E-37 T 10-03-2017 CpPa04_RS01660 00d633e5020806a1c0937a778a5f168d 1336 Gene3D G3DSA:2.40.40.20 492 564 5.1E-37 T 10-03-2017 CpPa04_RS01660 00d633e5020806a1c0937a778a5f168d 1336 SUPERFAMILY SSF64484 5 1292 0.0 T 10-03-2017 CpPa04_RS01660 00d633e5020806a1c0937a778a5f168d 1336 Pfam PF04998 RNA polymerase Rpb1, domain 5 854 1238 4.4E-64 T 10-03-2017 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CpPa04_RS00445 2aec100278c3e0d0a0e222853303783d 96 SUPERFAMILY SSF55174 3 66 8.64E-18 T 10-03-2017 CpPa04_RS00445 2aec100278c3e0d0a0e222853303783d 96 Pfam PF13275 S4 domain 6 66 2.5E-25 T 10-03-2017 CpPa04_RS00445 2aec100278c3e0d0a0e222853303783d 96 Gene3D G3DSA:3.10.290.10 1 68 6.5E-27 T 10-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 CpPa04_RS03805 ea523cf1a1ac26138ba39eeec9903482 128 SUPERFAMILY SSF57783 11 44 9.01E-12 T 10-03-2017 CpPa04_RS03805 ea523cf1a1ac26138ba39eeec9903482 128 Gene3D G3DSA:2.20.25.10 10 47 3.6E-18 T 10-03-2017 CpPa04_RS03805 ea523cf1a1ac26138ba39eeec9903482 128 Pfam PF08274 PhnA Zinc-Ribbon 11 40 1.9E-11 T 10-03-2017 IPR013987 PhnA protein, N-terminal CpPa04_RS03805 ea523cf1a1ac26138ba39eeec9903482 128 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 11 128 1.7E-27 T 10-03-2017 IPR004624 PhnA protein CpPa04_RS03805 ea523cf1a1ac26138ba39eeec9903482 128 Gene3D G3DSA:2.30.30.40 57 128 2.8E-23 T 10-03-2017 CpPa04_RS03805 ea523cf1a1ac26138ba39eeec9903482 128 SUPERFAMILY SSF82057 55 128 7.78E-17 T 10-03-2017 CpPa04_RS03805 ea523cf1a1ac26138ba39eeec9903482 128 Pfam PF03831 PhnA domain 57 128 1.9E-22 T 10-03-2017 IPR013988 PhnA protein, C-terminal CpPa04_RS01000 ec41a69f68c834f29e47159e0355696d 275 Pfam PF12698 ABC-2 family transporter protein 70 266 8.7E-17 T 10-03-2017 CpPa04_RS01925 03da335f2425222a8c834a9bb60dd310 415 Gene3D G3DSA:3.40.190.10 173 341 1.1E-31 T 10-03-2017 CpPa04_RS01925 03da335f2425222a8c834a9bb60dd310 415 Pfam PF13416 Bacterial extracellular solute-binding protein 65 355 4.8E-37 T 10-03-2017 CpPa04_RS01925 03da335f2425222a8c834a9bb60dd310 415 Gene3D G3DSA:3.40.190.10 43 172 1.3E-14 T 10-03-2017 CpPa04_RS01925 03da335f2425222a8c834a9bb60dd310 415 SUPERFAMILY SSF53850 41 385 2.87E-54 T 10-03-2017 CpPa04_RS03950 23e586beffe914cd0460d9cc695a2d7c 454 Pfam PF00324 Amino acid permease 18 448 5.9E-95 T 10-03-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CpPa04_RS03950 23e586beffe914cd0460d9cc695a2d7c 454 PIRSF PIRSF006060 1 453 1.4E-65 T 10-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CpPa04_RS03950 23e586beffe914cd0460d9cc695a2d7c 454 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 10-03-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CpPa04_RS05710 c447914be85977408a7fca7c19d1e36e 409 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 255 396 1.0E-65 T 10-03-2017 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CpPa04_RS05710 c447914be85977408a7fca7c19d1e36e 409 PIRSF PIRSF000497 3 408 2.1E-161 T 10-03-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CpPa04_RS05710 c447914be85977408a7fca7c19d1e36e 409 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 11 106 2.5E-37 T 10-03-2017 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CpPa04_RS05710 c447914be85977408a7fca7c19d1e36e 409 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 11 406 1.4E-160 T 10-03-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CpPa04_RS05710 c447914be85977408a7fca7c19d1e36e 409 Gene3D G3DSA:3.30.300.10 17 149 2.5E-39 T 10-03-2017 CpPa04_RS05710 c447914be85977408a7fca7c19d1e36e 409 SUPERFAMILY SSF55973 128 254 2.51E-44 T 10-03-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CpPa04_RS05710 c447914be85977408a7fca7c19d1e36e 409 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 8 407 54.789 T 10-03-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CpPa04_RS05710 c447914be85977408a7fca7c19d1e36e 409 Gene3D G3DSA:3.30.300.10 150 255 6.9E-39 T 10-03-2017 CpPa04_RS05710 c447914be85977408a7fca7c19d1e36e 409 Gene3D G3DSA:3.30.300.10 266 407 1.8E-67 T 10-03-2017 CpPa04_RS05710 c447914be85977408a7fca7c19d1e36e 409 SUPERFAMILY SSF55973 10 116 2.75E-41 T 10-03-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CpPa04_RS05710 c447914be85977408a7fca7c19d1e36e 409 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 281 289 - T 10-03-2017 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CpPa04_RS05710 c447914be85977408a7fca7c19d1e36e 409 SUPERFAMILY SSF55973 255 407 4.32E-66 T 10-03-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CpPa04_RS05710 c447914be85977408a7fca7c19d1e36e 409 Pfam PF02772 S-adenosylmethionine synthetase, central domain 131 253 1.9E-42 T 10-03-2017 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CpPa04_RS05710 c447914be85977408a7fca7c19d1e36e 409 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 132 142 - T 10-03-2017 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CpPa04_RS04425 a46673aa6b473f9fd7f8bf9708ae5f24 97 SUPERFAMILY SSF141000 4 94 1.2E-25 T 10-03-2017 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CpPa04_RS04425 a46673aa6b473f9fd7f8bf9708ae5f24 97 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 95 5.4E-25 T 10-03-2017 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CpPa04_RS04425 a46673aa6b473f9fd7f8bf9708ae5f24 97 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 91 2.4E-16 T 10-03-2017 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CpPa04_RS04425 a46673aa6b473f9fd7f8bf9708ae5f24 97 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 3 96 21.507 T 10-03-2017 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CpPa04_RS10495 b1b4c1e40baf55dc82fa633a66d5b4ec 307 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 1.0E-7 T 10-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CpPa04_RS10495 b1b4c1e40baf55dc82fa633a66d5b4ec 307 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 1.0E-7 T 10-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CpPa04_RS10495 b1b4c1e40baf55dc82fa633a66d5b4ec 307 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 1.0E-7 T 10-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CpPa04_RS10495 b1b4c1e40baf55dc82fa633a66d5b4ec 307 SMART SM01130 4 304 3.6E-84 T 10-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CpPa04_RS10495 b1b4c1e40baf55dc82fa633a66d5b4ec 307 Pfam PF00701 Dihydrodipicolinate synthetase family 6 300 1.6E-54 T 10-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CpPa04_RS10495 b1b4c1e40baf55dc82fa633a66d5b4ec 307 PIRSF PIRSF001365 1 307 1.8E-78 T 10-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CpPa04_RS10495 b1b4c1e40baf55dc82fa633a66d5b4ec 307 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 136 166 - T 10-03-2017 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CpPa04_RS10495 b1b4c1e40baf55dc82fa633a66d5b4ec 307 SUPERFAMILY SSF51569 3 305 1.99E-75 T 10-03-2017 CpPa04_RS10495 b1b4c1e40baf55dc82fa633a66d5b4ec 307 Gene3D G3DSA:3.20.20.70 3 306 1.1E-84 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS06180 af86c0536547541d52b50f34e4c65442 144 Gene3D G3DSA:3.50.80.10 1 143 7.9E-52 T 10-03-2017 IPR023509 D-Tyr tRNAtyr deacylase-like domain CpPa04_RS06180 af86c0536547541d52b50f34e4c65442 144 SUPERFAMILY SSF69500 1 143 1.03E-40 T 10-03-2017 IPR023509 D-Tyr tRNAtyr deacylase-like domain CpPa04_RS06180 af86c0536547541d52b50f34e4c65442 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 143 2.9E-46 T 10-03-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 CpPa04_RS06180 af86c0536547541d52b50f34e4c65442 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 143 3.0E-34 T 10-03-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 CpPa04_RS06180 af86c0536547541d52b50f34e4c65442 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 27.338 T 10-03-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 CpPa04_RS07080 797552cd471224f962511d4ca4ab46be 361 Gene3D G3DSA:3.40.50.2000 192 323 5.0E-5 T 10-03-2017 CpPa04_RS07080 797552cd471224f962511d4ca4ab46be 361 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 6 137 2.2E-37 T 10-03-2017 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CpPa04_RS07080 797552cd471224f962511d4ca4ab46be 361 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 186 335 8.5E-31 T 10-03-2017 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 CpPa04_RS07080 797552cd471224f962511d4ca4ab46be 361 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 6 351 29.656 T 10-03-2017 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CpPa04_RS07080 797552cd471224f962511d4ca4ab46be 361 Gene3D G3DSA:3.40.50.2000 2 191 3.5E-57 T 10-03-2017 CpPa04_RS07080 797552cd471224f962511d4ca4ab46be 361 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 5 346 9.4E-78 T 10-03-2017 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CpPa04_RS07080 797552cd471224f962511d4ca4ab46be 361 SUPERFAMILY SSF53756 5 352 8.22E-93 T 10-03-2017 CpPa04_RS09800 5f8a6bcbeeb8d424082d93885f104fb9 203 Gene3D G3DSA:3.40.50.1820 15 198 8.4E-15 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS09800 5f8a6bcbeeb8d424082d93885f104fb9 203 SUPERFAMILY SSF53474 17 198 4.05E-16 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS09800 5f8a6bcbeeb8d424082d93885f104fb9 203 Pfam PF00561 alpha/beta hydrolase fold 17 69 1.1E-7 T 10-03-2017 IPR000073 Alpha/beta hydrolase fold-1 CpPa04_RS00305 0ce5b98bcbd204c0e304e419c0bc9622 331 SMART SM00876 232 324 6.0E-24 T 10-03-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CpPa04_RS00305 0ce5b98bcbd204c0e304e419c0bc9622 331 SMART SM00729 57 261 7.8E-32 T 10-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CpPa04_RS00305 0ce5b98bcbd204c0e304e419c0bc9622 331 Pfam PF04055 Radical SAM superfamily 64 219 6.3E-14 T 10-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CpPa04_RS00305 0ce5b98bcbd204c0e304e419c0bc9622 331 Hamap MF_01694 Biotin synthase [bioB]. 17 325 38.06 T 10-03-2017 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CpPa04_RS00305 0ce5b98bcbd204c0e304e419c0bc9622 331 SUPERFAMILY SSF102114 16 315 3.27E-66 T 10-03-2017 CpPa04_RS00305 0ce5b98bcbd204c0e304e419c0bc9622 331 Gene3D G3DSA:3.20.20.70 17 320 3.5E-77 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS00305 0ce5b98bcbd204c0e304e419c0bc9622 331 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 232 320 8.0E-11 T 10-03-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CpPa04_RS00305 0ce5b98bcbd204c0e304e419c0bc9622 331 PIRSF PIRSF001619 1 330 2.9E-106 T 10-03-2017 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CpPa04_RS00305 0ce5b98bcbd204c0e304e419c0bc9622 331 TIGRFAM TIGR00433 bioB: biotin synthase 30 321 5.2E-104 T 10-03-2017 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CpPa04_RS05995 34837e096072f6e4f068af8c53d1f75e 403 Gene3D G3DSA:3.40.640.10 79 291 2.8E-82 T 10-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CpPa04_RS05995 34837e096072f6e4f068af8c53d1f75e 403 Gene3D G3DSA:3.90.1150.10 292 398 9.7E-26 T 10-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CpPa04_RS05995 34837e096072f6e4f068af8c53d1f75e 403 Pfam PF00155 Aminotransferase class I and II 62 395 1.8E-58 T 10-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CpPa04_RS05995 34837e096072f6e4f068af8c53d1f75e 403 SUPERFAMILY SSF53383 39 399 2.72E-98 T 10-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase CpPa04_RS00160 03e00883019326cb5ae72c4027d9ee8f 664 Gene3D G3DSA:3.30.200.20 2 77 1.7E-28 T 10-03-2017 CpPa04_RS00160 03e00883019326cb5ae72c4027d9ee8f 664 SMART SM00220 9 283 2.5E-59 T 10-03-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CpPa04_RS00160 03e00883019326cb5ae72c4027d9ee8f 664 Pfam PF03793 PASTA domain 386 446 3.4E-13 T 10-03-2017 IPR005543 PASTA domain CpPa04_RS00160 03e00883019326cb5ae72c4027d9ee8f 664 Pfam PF03793 PASTA domain 453 516 6.3E-17 T 10-03-2017 IPR005543 PASTA domain CpPa04_RS00160 03e00883019326cb5ae72c4027d9ee8f 664 Pfam PF03793 PASTA domain 521 580 1.7E-12 T 10-03-2017 IPR005543 PASTA domain CpPa04_RS00160 03e00883019326cb5ae72c4027d9ee8f 664 Pfam PF03793 PASTA domain 586 653 1.4E-10 T 10-03-2017 IPR005543 PASTA domain CpPa04_RS00160 03e00883019326cb5ae72c4027d9ee8f 664 SUPERFAMILY SSF56112 5 277 2.29E-75 T 10-03-2017 IPR011009 Protein kinase-like domain CpPa04_RS00160 03e00883019326cb5ae72c4027d9ee8f 664 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 15 38 - T 10-03-2017 IPR017441 Protein kinase, ATP binding site GO:0005524 CpPa04_RS00160 03e00883019326cb5ae72c4027d9ee8f 664 Gene3D G3DSA:1.10.510.10 78 270 6.2E-49 T 10-03-2017 CpPa04_RS00160 03e00883019326cb5ae72c4027d9ee8f 664 SMART SM00740 381 447 1.1E-10 T 10-03-2017 IPR005543 PASTA domain CpPa04_RS00160 03e00883019326cb5ae72c4027d9ee8f 664 SMART SM00740 448 516 1.4E-16 T 10-03-2017 IPR005543 PASTA domain CpPa04_RS00160 03e00883019326cb5ae72c4027d9ee8f 664 SMART SM00740 517 581 6.0E-9 T 10-03-2017 IPR005543 PASTA domain CpPa04_RS00160 03e00883019326cb5ae72c4027d9ee8f 664 SMART SM00740 582 654 11.0 T 10-03-2017 IPR005543 PASTA domain CpPa04_RS00160 03e00883019326cb5ae72c4027d9ee8f 664 Pfam PF00069 Protein kinase domain 9 225 5.9E-51 T 10-03-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CpPa04_RS00160 03e00883019326cb5ae72c4027d9ee8f 664 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 132 144 - T 10-03-2017 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 CpPa04_RS01800 a7d1b43ce0dd397261b4803210fa8c78 92 Gene3D G3DSA:3.30.860.10 1 91 3.2E-40 T 10-03-2017 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01800 a7d1b43ce0dd397261b4803210fa8c78 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 7.7E-46 T 10-03-2017 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 CpPa04_RS01800 a7d1b43ce0dd397261b4803210fa8c78 92 PIRSF PIRSF002144 1 92 3.3E-30 T 10-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01800 a7d1b43ce0dd397261b4803210fa8c78 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 10-03-2017 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01800 a7d1b43ce0dd397261b4803210fa8c78 92 Pfam PF00203 Ribosomal protein S19 3 83 1.0E-35 T 10-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01800 a7d1b43ce0dd397261b4803210fa8c78 92 SUPERFAMILY SSF54570 3 83 1.7E-33 T 10-03-2017 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01800 a7d1b43ce0dd397261b4803210fa8c78 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.466 T 10-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01800 a7d1b43ce0dd397261b4803210fa8c78 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 5.6E-23 T 10-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01800 a7d1b43ce0dd397261b4803210fa8c78 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 5.6E-23 T 10-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01800 a7d1b43ce0dd397261b4803210fa8c78 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 5.6E-23 T 10-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS05315 c3b52d91357ae13b786f5fa3c18bc49f 435 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 6 367 6.8E-143 T 10-03-2017 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CpPa04_RS05315 c3b52d91357ae13b786f5fa3c18bc49f 435 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 435 2.0E-179 T 10-03-2017 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CpPa04_RS05315 c3b52d91357ae13b786f5fa3c18bc49f 435 PIRSF PIRSF004539 1 435 1.5E-166 T 10-03-2017 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CpPa04_RS02680 ab709906d46bee0479f506ed547d9249 222 SUPERFAMILY SSF143081 5 211 2.88E-58 T 10-03-2017 IPR003738 SOS response associated peptidase (SRAP) CpPa04_RS02680 ab709906d46bee0479f506ed547d9249 222 Gene3D G3DSA:3.90.1680.10 4 211 1.7E-58 T 10-03-2017 IPR003738 SOS response associated peptidase (SRAP) CpPa04_RS02680 ab709906d46bee0479f506ed547d9249 222 Pfam PF02586 SOS response associated peptidase (SRAP) 4 202 2.3E-50 T 10-03-2017 IPR003738 SOS response associated peptidase (SRAP) CpPa04_RS07505 65f40dacae2889711883c296b6a9656d 212 SUPERFAMILY SSF48613 8 211 3.34E-51 T 10-03-2017 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CpPa04_RS07505 65f40dacae2889711883c296b6a9656d 212 Pfam PF01126 Heme oxygenase 8 210 2.6E-60 T 10-03-2017 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|Reactome: R-HSA-189483|Reactome: R-HSA-917937 CpPa04_RS07505 65f40dacae2889711883c296b6a9656d 212 PRINTS PR00088 Haem oxygenase signature 122 143 1.2E-31 T 10-03-2017 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|Reactome: R-HSA-189483|Reactome: R-HSA-917937 CpPa04_RS07505 65f40dacae2889711883c296b6a9656d 212 PRINTS PR00088 Haem oxygenase signature 7 32 1.2E-31 T 10-03-2017 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|Reactome: R-HSA-189483|Reactome: R-HSA-917937 CpPa04_RS07505 65f40dacae2889711883c296b6a9656d 212 PRINTS PR00088 Haem oxygenase signature 67 92 1.2E-31 T 10-03-2017 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|Reactome: R-HSA-189483|Reactome: R-HSA-917937 CpPa04_RS07505 65f40dacae2889711883c296b6a9656d 212 PRINTS PR00088 Haem oxygenase signature 164 185 1.2E-31 T 10-03-2017 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|Reactome: R-HSA-189483|Reactome: R-HSA-917937 CpPa04_RS07505 65f40dacae2889711883c296b6a9656d 212 PRINTS PR00088 Haem oxygenase signature 42 67 1.2E-31 T 10-03-2017 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|Reactome: R-HSA-189483|Reactome: R-HSA-917937 CpPa04_RS07505 65f40dacae2889711883c296b6a9656d 212 PRINTS PR00088 Haem oxygenase signature 196 212 1.2E-31 T 10-03-2017 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|Reactome: R-HSA-189483|Reactome: R-HSA-917937 CpPa04_RS07505 65f40dacae2889711883c296b6a9656d 212 Gene3D G3DSA:1.20.910.10 2 211 3.0E-61 T 10-03-2017 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CpPa04_RS07505 65f40dacae2889711883c296b6a9656d 212 PIRSF PIRSF000343 1 212 8.8E-60 T 10-03-2017 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|Reactome: R-HSA-189483|Reactome: R-HSA-917937 CpPa04_RS07505 65f40dacae2889711883c296b6a9656d 212 ProSitePatterns PS00593 Heme oxygenase signature. 125 135 - T 10-03-2017 IPR018207 Haem oxygenase conserved site GO:0004392|GO:0055114 KEGG: 00860+1.14.14.18|Reactome: R-HSA-189483|Reactome: R-HSA-917937 CpPa04_RS05475 ef923245a3af60a3006d2181d55640b8 580 Gene3D G3DSA:3.90.1720.10 438 579 1.1E-40 T 10-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain CpPa04_RS05475 ef923245a3af60a3006d2181d55640b8 580 Pfam PF00877 NlpC/P60 family 457 577 2.1E-27 T 10-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain CpPa04_RS05475 ef923245a3af60a3006d2181d55640b8 580 SUPERFAMILY SSF54001 441 579 1.13E-34 T 10-03-2017 CpPa04_RS07290 84d7b4e0d66a63227f0cbf0d6dd6b572 550 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 140 169 - T 10-03-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CpPa04_RS07290 84d7b4e0d66a63227f0cbf0d6dd6b572 550 SUPERFAMILY SSF47005 234 279 6.8E-13 T 10-03-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CpPa04_RS07290 84d7b4e0d66a63227f0cbf0d6dd6b572 550 SUPERFAMILY SSF52777 315 541 2.49E-72 T 10-03-2017 CpPa04_RS07290 84d7b4e0d66a63227f0cbf0d6dd6b572 550 Gene3D G3DSA:4.10.320.10 232 280 6.1E-18 T 10-03-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CpPa04_RS07290 84d7b4e0d66a63227f0cbf0d6dd6b572 550 Gene3D G3DSA:3.30.559.10 314 542 2.2E-75 T 10-03-2017 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 CpPa04_RS07290 84d7b4e0d66a63227f0cbf0d6dd6b572 550 SUPERFAMILY SSF51230 2 94 1.15E-27 T 10-03-2017 IPR011053 Single hybrid motif CpPa04_RS07290 84d7b4e0d66a63227f0cbf0d6dd6b572 550 Pfam PF00364 Biotin-requiring enzyme 4 76 2.8E-22 T 10-03-2017 IPR000089 Biotin/lipoyl attachment CpPa04_RS07290 84d7b4e0d66a63227f0cbf0d6dd6b572 550 Pfam PF00364 Biotin-requiring enzyme 117 189 5.9E-22 T 10-03-2017 IPR000089 Biotin/lipoyl attachment CpPa04_RS07290 84d7b4e0d66a63227f0cbf0d6dd6b572 550 Gene3D G3DSA:2.40.50.100 1 96 1.8E-30 T 10-03-2017 CpPa04_RS07290 84d7b4e0d66a63227f0cbf0d6dd6b572 550 Gene3D G3DSA:2.40.50.100 114 209 9.3E-31 T 10-03-2017 CpPa04_RS07290 84d7b4e0d66a63227f0cbf0d6dd6b572 550 Pfam PF02817 e3 binding domain 241 275 4.4E-14 T 10-03-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CpPa04_RS07290 84d7b4e0d66a63227f0cbf0d6dd6b572 550 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 10-03-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CpPa04_RS07290 84d7b4e0d66a63227f0cbf0d6dd6b572 550 TIGRFAM TIGR02927 SucB_Actino: 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase 1 550 1.3E-260 T 10-03-2017 IPR014276 2-oxoglutarate dehydrogenase, E2 component KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 CpPa04_RS07290 84d7b4e0d66a63227f0cbf0d6dd6b572 550 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 315 542 2.2E-73 T 10-03-2017 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CpPa04_RS07290 84d7b4e0d66a63227f0cbf0d6dd6b572 550 SUPERFAMILY SSF51230 115 207 5.1E-28 T 10-03-2017 IPR011053 Single hybrid motif CpPa04_RS05615 dbdd34608ca9ea5664c7505bda4d58bd 78 Pfam PF03840 Preprotein translocase SecG subunit 5 73 6.4E-20 T 10-03-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CpPa04_RS05615 dbdd34608ca9ea5664c7505bda4d58bd 78 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 4 73 1.8E-21 T 10-03-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CpPa04_RS03605 2750d38839025133970482f9e85b6f3b 1264 SUPERFAMILY SSF52540 57 331 6.79E-62 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03605 2750d38839025133970482f9e85b6f3b 1264 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 165 1131 0.0 T 10-03-2017 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CpPa04_RS03605 2750d38839025133970482f9e85b6f3b 1264 SMART SM00490 873 957 4.1E-16 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS03605 2750d38839025133970482f9e85b6f3b 1264 SMART SM00982 1058 1156 6.2E-37 T 10-03-2017 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CpPa04_RS03605 2750d38839025133970482f9e85b6f3b 1264 SUPERFAMILY SSF141259 512 591 3.01E-14 T 10-03-2017 IPR003711 CarD-like/TRCF domain CpPa04_RS03605 2750d38839025133970482f9e85b6f3b 1264 Pfam PF00271 Helicase conserved C-terminal domain 855 956 1.6E-14 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS03605 2750d38839025133970482f9e85b6f3b 1264 SUPERFAMILY SSF143517 1052 1203 2.75E-33 T 10-03-2017 CpPa04_RS03605 2750d38839025133970482f9e85b6f3b 1264 Gene3D G3DSA:3.40.50.300 636 833 1.2E-49 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03605 2750d38839025133970482f9e85b6f3b 1264 SUPERFAMILY SSF52540 392 498 5.01E-5 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03605 2750d38839025133970482f9e85b6f3b 1264 Pfam PF03461 TRCF domain 1059 1144 2.1E-24 T 10-03-2017 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CpPa04_RS03605 2750d38839025133970482f9e85b6f3b 1264 SUPERFAMILY SSF52540 573 830 1.4E-57 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03605 2750d38839025133970482f9e85b6f3b 1264 SMART SM01058 518 623 4.9E-45 T 10-03-2017 IPR003711 CarD-like/TRCF domain CpPa04_RS03605 2750d38839025133970482f9e85b6f3b 1264 Pfam PF00270 DEAD/DEAH box helicase 672 813 4.0E-18 T 10-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CpPa04_RS03605 2750d38839025133970482f9e85b6f3b 1264 Gene3D G3DSA:3.40.50.300 842 1002 1.2E-31 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03605 2750d38839025133970482f9e85b6f3b 1264 Gene3D G3DSA:3.30.2060.10 148 221 1.9E-14 T 10-03-2017 CpPa04_RS03605 2750d38839025133970482f9e85b6f3b 1264 SUPERFAMILY SSF52540 829 1037 1.65E-45 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03605 2750d38839025133970482f9e85b6f3b 1264 SMART SM00487 647 839 2.5E-28 T 10-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CpPa04_RS03605 2750d38839025133970482f9e85b6f3b 1264 Pfam PF02559 CarD-like/TRCF domain 519 622 4.5E-29 T 10-03-2017 IPR003711 CarD-like/TRCF domain CpPa04_RS03605 2750d38839025133970482f9e85b6f3b 1264 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 54 1157 27.733 T 10-03-2017 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CpPa04_RS01960 26c20941cff4191cefd88fadc4add5fb 440 PIRSF PIRSF004557 1 440 3.2E-123 T 10-03-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CpPa04_RS01960 26c20941cff4191cefd88fadc4add5fb 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 72 92 2.4E-99 T 10-03-2017 CpPa04_RS01960 26c20941cff4191cefd88fadc4add5fb 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 2.4E-99 T 10-03-2017 CpPa04_RS01960 26c20941cff4191cefd88fadc4add5fb 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 268 287 2.4E-99 T 10-03-2017 CpPa04_RS01960 26c20941cff4191cefd88fadc4add5fb 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 2.4E-99 T 10-03-2017 CpPa04_RS01960 26c20941cff4191cefd88fadc4add5fb 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 408 426 2.4E-99 T 10-03-2017 CpPa04_RS01960 26c20941cff4191cefd88fadc4add5fb 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 17 35 2.4E-99 T 10-03-2017 CpPa04_RS01960 26c20941cff4191cefd88fadc4add5fb 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 181 204 2.4E-99 T 10-03-2017 CpPa04_RS01960 26c20941cff4191cefd88fadc4add5fb 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 113 136 2.4E-99 T 10-03-2017 CpPa04_RS01960 26c20941cff4191cefd88fadc4add5fb 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 155 180 2.4E-99 T 10-03-2017 CpPa04_RS01960 26c20941cff4191cefd88fadc4add5fb 440 SUPERFAMILY SSF103491 3 430 1.11E-124 T 10-03-2017 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CpPa04_RS01960 26c20941cff4191cefd88fadc4add5fb 440 Hamap MF_01465 Protein translocase subunit SecY [secY]. 4 439 28.501 T 10-03-2017 IPR026593 Protein translocase subunit SecY CpPa04_RS01960 26c20941cff4191cefd88fadc4add5fb 440 ProSitePatterns PS00755 Protein secY signature 1. 73 92 - T 10-03-2017 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CpPa04_RS01960 26c20941cff4191cefd88fadc4add5fb 440 ProSitePatterns PS00756 Protein secY signature 2. 174 191 - T 10-03-2017 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CpPa04_RS01960 26c20941cff4191cefd88fadc4add5fb 440 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 14 435 4.1E-128 T 10-03-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CpPa04_RS01960 26c20941cff4191cefd88fadc4add5fb 440 Pfam PF00344 SecY translocase 73 423 8.3E-115 T 10-03-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CpPa04_RS01960 26c20941cff4191cefd88fadc4add5fb 440 Gene3D G3DSA:1.10.3370.10 3 440 2.4E-151 T 10-03-2017 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CpPa04_RS07970 b8cf42145e8e2c1890ddf60d188b74a0 555 Pfam PF03772 Competence protein 186 456 5.4E-47 T 10-03-2017 IPR004477 ComEC/Rec2-related protein CpPa04_RS07970 b8cf42145e8e2c1890ddf60d188b74a0 555 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 207 389 1.4E-21 T 10-03-2017 IPR004477 ComEC/Rec2-related protein CpPa04_RS08095 fd1fb43fbba01291571eb272df03dd30 209 Gene3D G3DSA:3.90.226.10 27 206 6.8E-74 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS08095 fd1fb43fbba01291571eb272df03dd30 209 SUPERFAMILY SSF52096 24 206 1.89E-62 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS08095 fd1fb43fbba01291571eb272df03dd30 209 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 101 112 - T 10-03-2017 IPR018215 ClpP, Ser active site CpPa04_RS08095 fd1fb43fbba01291571eb272df03dd30 209 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 123 136 - T 10-03-2017 IPR033135 ClpP, histidine active site CpPa04_RS08095 fd1fb43fbba01291571eb272df03dd30 209 PRINTS PR00127 Clp protease catalytic subunit P signature 70 90 1.9E-41 T 10-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CpPa04_RS08095 fd1fb43fbba01291571eb272df03dd30 209 PRINTS PR00127 Clp protease catalytic subunit P signature 101 118 1.9E-41 T 10-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CpPa04_RS08095 fd1fb43fbba01291571eb272df03dd30 209 PRINTS PR00127 Clp protease catalytic subunit P signature 122 141 1.9E-41 T 10-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CpPa04_RS08095 fd1fb43fbba01291571eb272df03dd30 209 PRINTS PR00127 Clp protease catalytic subunit P signature 30 45 1.9E-41 T 10-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CpPa04_RS08095 fd1fb43fbba01291571eb272df03dd30 209 PRINTS PR00127 Clp protease catalytic subunit P signature 180 199 1.9E-41 T 10-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CpPa04_RS08095 fd1fb43fbba01291571eb272df03dd30 209 Pfam PF00574 Clp protease 27 203 3.5E-76 T 10-03-2017 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CpPa04_RS08095 fd1fb43fbba01291571eb272df03dd30 209 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 14 205 39.032 T 10-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CpPa04_RS07765 f48089f29c125af31887ae6b69ddf540 378 SUPERFAMILY SSF57938 130 210 8.63E-19 T 10-03-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CpPa04_RS07765 f48089f29c125af31887ae6b69ddf540 378 SUPERFAMILY SSF46565 3 101 3.66E-31 T 10-03-2017 IPR001623 DnaJ domain CpPa04_RS07765 f48089f29c125af31887ae6b69ddf540 378 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 1 375 36.942 T 10-03-2017 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CpPa04_RS07765 f48089f29c125af31887ae6b69ddf540 378 Gene3D G3DSA:2.60.260.20 256 335 2.5E-22 T 10-03-2017 CpPa04_RS07765 f48089f29c125af31887ae6b69ddf540 378 PRINTS PR00625 DnaJ domain signature 40 60 7.1E-22 T 10-03-2017 IPR001623 DnaJ domain CpPa04_RS07765 f48089f29c125af31887ae6b69ddf540 378 PRINTS PR00625 DnaJ domain signature 60 79 7.1E-22 T 10-03-2017 IPR001623 DnaJ domain CpPa04_RS07765 f48089f29c125af31887ae6b69ddf540 378 PRINTS PR00625 DnaJ domain signature 6 24 7.1E-22 T 10-03-2017 IPR001623 DnaJ domain CpPa04_RS07765 f48089f29c125af31887ae6b69ddf540 378 PRINTS PR00625 DnaJ domain signature 24 39 7.1E-22 T 10-03-2017 IPR001623 DnaJ domain CpPa04_RS07765 f48089f29c125af31887ae6b69ddf540 378 SMART SM00271 3 60 3.3E-27 T 10-03-2017 IPR001623 DnaJ domain CpPa04_RS07765 f48089f29c125af31887ae6b69ddf540 378 Pfam PF00684 DnaJ central domain 143 207 1.1E-13 T 10-03-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CpPa04_RS07765 f48089f29c125af31887ae6b69ddf540 378 SUPERFAMILY SSF49493 258 345 5.76E-21 T 10-03-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CpPa04_RS07765 f48089f29c125af31887ae6b69ddf540 378 Gene3D G3DSA:1.10.287.110 3 101 7.8E-31 T 10-03-2017 IPR001623 DnaJ domain CpPa04_RS07765 f48089f29c125af31887ae6b69ddf540 378 Gene3D G3DSA:2.10.230.10 137 209 4.6E-20 T 10-03-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CpPa04_RS07765 f48089f29c125af31887ae6b69ddf540 378 SUPERFAMILY SSF49493 213 256 7.33E-17 T 10-03-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CpPa04_RS07765 f48089f29c125af31887ae6b69ddf540 378 SUPERFAMILY SSF49493 114 148 7.33E-17 T 10-03-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CpPa04_RS07765 f48089f29c125af31887ae6b69ddf540 378 Pfam PF01556 DnaJ C terminal domain 120 334 1.2E-36 T 10-03-2017 IPR002939 Chaperone DnaJ, C-terminal CpPa04_RS07765 f48089f29c125af31887ae6b69ddf540 378 Gene3D G3DSA:2.60.260.20 210 254 3.8E-18 T 10-03-2017 CpPa04_RS07765 f48089f29c125af31887ae6b69ddf540 378 Gene3D G3DSA:2.60.260.20 102 136 3.8E-18 T 10-03-2017 CpPa04_RS07765 f48089f29c125af31887ae6b69ddf540 378 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 4 351 2.0E-114 T 10-03-2017 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CpPa04_RS07765 f48089f29c125af31887ae6b69ddf540 378 Pfam PF00226 DnaJ domain 4 65 6.0E-24 T 10-03-2017 IPR001623 DnaJ domain CpPa04_RS01235 df7142cb2d7f62d3d6f529952e3121f4 475 SMART SM00530 9 64 1.6E-12 T 10-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CpPa04_RS01235 df7142cb2d7f62d3d6f529952e3121f4 475 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 319 475 6.5E-68 T 10-03-2017 IPR018653 Domain of unknown function DUF2083,transcriptional regulator CpPa04_RS01235 df7142cb2d7f62d3d6f529952e3121f4 475 Pfam PF06114 Domain of unknown function (DUF955) 211 318 2.4E-17 T 10-03-2017 IPR010359 HTH domain, IrrE-type CpPa04_RS01235 df7142cb2d7f62d3d6f529952e3121f4 475 SUPERFAMILY SSF47413 3 66 2.67E-14 T 10-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CpPa04_RS01235 df7142cb2d7f62d3d6f529952e3121f4 475 Gene3D G3DSA:1.10.260.40 3 71 7.7E-19 T 10-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CpPa04_RS01235 df7142cb2d7f62d3d6f529952e3121f4 475 PIRSF PIRSF019251 1 475 3.8E-181 T 10-03-2017 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 CpPa04_RS01235 df7142cb2d7f62d3d6f529952e3121f4 475 Pfam PF13560 Helix-turn-helix domain 7 60 9.3E-11 T 10-03-2017 CpPa04_RS03910 9f88cd4b68339a0d18087d91c0c5b4d1 294 Gene3D G3DSA:3.40.50.10320 7 283 4.0E-70 T 10-03-2017 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 CpPa04_RS03910 9f88cd4b68339a0d18087d91c0c5b4d1 294 SUPERFAMILY SSF102588 6 283 4.84E-58 T 10-03-2017 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 CpPa04_RS03910 9f88cd4b68339a0d18087d91c0c5b4d1 294 Hamap MF_01696 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase [mshB]. 9 292 34.975 T 10-03-2017 IPR017810 Mycothiol biosynthesis protein, MshB GO:0035595 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CpPa04_RS03910 9f88cd4b68339a0d18087d91c0c5b4d1 294 TIGRFAM TIGR03445 mycothiol_MshB: N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase 12 236 1.7E-74 T 10-03-2017 IPR017810 Mycothiol biosynthesis protein, MshB GO:0035595 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CpPa04_RS03910 9f88cd4b68339a0d18087d91c0c5b4d1 294 Pfam PF02585 GlcNAc-PI de-N-acetylase 11 158 4.4E-22 T 10-03-2017 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 CpPa04_RS08320 08232b5d4605a6d344716eb5192b6f3a 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 32 73 5.0E-11 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS08320 08232b5d4605a6d344716eb5192b6f3a 217 Gene3D G3DSA:1.10.357.10 16 211 1.4E-22 T 10-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CpPa04_RS08320 08232b5d4605a6d344716eb5192b6f3a 217 SUPERFAMILY SSF46689 22 92 6.67E-13 T 10-03-2017 IPR009057 Homeodomain-like GO:0003677 CpPa04_RS08320 08232b5d4605a6d344716eb5192b6f3a 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 53 76 5.3E-5 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS08320 08232b5d4605a6d344716eb5192b6f3a 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 45 5.3E-5 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS04350 671ec31b10d429a0c04cbad9a658f465 297 Gene3D G3DSA:1.25.40.10 226 297 1.7E-10 T 10-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CpPa04_RS04350 671ec31b10d429a0c04cbad9a658f465 297 Pfam PF00085 Thioredoxin 60 143 5.1E-8 T 10-03-2017 IPR013766 Thioredoxin domain GO:0045454 CpPa04_RS04350 671ec31b10d429a0c04cbad9a658f465 297 SUPERFAMILY SSF52833 23 145 1.3E-18 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS04350 671ec31b10d429a0c04cbad9a658f465 297 Gene3D G3DSA:3.40.30.10 40 145 2.7E-16 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS04350 671ec31b10d429a0c04cbad9a658f465 297 Pfam PF14561 Tetratricopeptide repeat 225 297 4.0E-15 T 10-03-2017 CpPa04_RS09320 aa5d27151d2465916f5adadafe251c18 323 Gene3D G3DSA:3.40.190.10 263 306 4.0E-26 T 10-03-2017 CpPa04_RS09320 aa5d27151d2465916f5adadafe251c18 323 Gene3D G3DSA:3.40.190.10 77 161 4.0E-26 T 10-03-2017 CpPa04_RS09320 aa5d27151d2465916f5adadafe251c18 323 SUPERFAMILY SSF53850 1 21 7.86E-53 T 10-03-2017 CpPa04_RS09320 aa5d27151d2465916f5adadafe251c18 323 SUPERFAMILY SSF53850 70 306 7.86E-53 T 10-03-2017 CpPa04_RS09320 aa5d27151d2465916f5adadafe251c18 323 Gene3D G3DSA:3.40.190.10 162 262 3.3E-23 T 10-03-2017 CpPa04_RS09320 aa5d27151d2465916f5adadafe251c18 323 SMART SM00062 80 307 1.2E-51 T 10-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CpPa04_RS09320 aa5d27151d2465916f5adadafe251c18 323 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 81 305 2.7E-45 T 10-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CpPa04_RS08655 1cde91613e0325943c201b65c8a0e266 358 PIRSF PIRSF000112 2 341 6.0E-73 T 10-03-2017 CpPa04_RS08655 1cde91613e0325943c201b65c8a0e266 358 Gene3D G3DSA:1.20.1090.10 160 346 4.9E-35 T 10-03-2017 CpPa04_RS08655 1cde91613e0325943c201b65c8a0e266 358 SUPERFAMILY SSF56796 7 333 1.14E-47 T 10-03-2017 CpPa04_RS08655 1cde91613e0325943c201b65c8a0e266 358 Gene3D G3DSA:3.40.50.1970 10 158 1.5E-28 T 10-03-2017 CpPa04_RS08655 1cde91613e0325943c201b65c8a0e266 358 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 331 3.2E-27 T 10-03-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CpPa04_RS06250 a8f6a647c78e041c2bc3bd8c9026fd4d 235 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 151 161 3.9E-9 T 10-03-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CpPa04_RS06250 a8f6a647c78e041c2bc3bd8c9026fd4d 235 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 162 173 3.9E-9 T 10-03-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CpPa04_RS06250 a8f6a647c78e041c2bc3bd8c9026fd4d 235 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 190 202 3.9E-9 T 10-03-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CpPa04_RS06250 a8f6a647c78e041c2bc3bd8c9026fd4d 235 Gene3D G3DSA:2.10.109.10 116 235 2.3E-39 T 10-03-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain CpPa04_RS06250 a8f6a647c78e041c2bc3bd8c9026fd4d 235 Pfam PF00717 Peptidase S24-like 154 217 4.7E-11 T 10-03-2017 IPR019759 Peptidase S24/S26A/S26B CpPa04_RS06250 a8f6a647c78e041c2bc3bd8c9026fd4d 235 SUPERFAMILY SSF46785 17 83 1.16E-19 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS06250 a8f6a647c78e041c2bc3bd8c9026fd4d 235 TIGRFAM TIGR00498 lexA: repressor LexA 16 235 4.3E-68 T 10-03-2017 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CpPa04_RS06250 a8f6a647c78e041c2bc3bd8c9026fd4d 235 Hamap MF_00015 LexA repressor [lexA]. 17 235 32.13 T 10-03-2017 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CpPa04_RS06250 a8f6a647c78e041c2bc3bd8c9026fd4d 235 Pfam PF01726 LexA DNA binding domain 16 79 8.2E-26 T 10-03-2017 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 CpPa04_RS06250 a8f6a647c78e041c2bc3bd8c9026fd4d 235 Gene3D G3DSA:1.10.10.10 16 82 2.1E-30 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS06250 a8f6a647c78e041c2bc3bd8c9026fd4d 235 SUPERFAMILY SSF51306 115 233 7.67E-32 T 10-03-2017 IPR015927 Peptidase S24/S26A/S26B/S26C CpPa04_RS07100 f47dcd17d7bbe8b9bd94f68597ca15de 516 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 490 28.713 T 10-03-2017 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS07100 f47dcd17d7bbe8b9bd94f68597ca15de 516 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 33 488 9.5E-110 T 10-03-2017 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS07100 f47dcd17d7bbe8b9bd94f68597ca15de 516 Gene3D G3DSA:3.40.1190.10 115 342 2.8E-63 T 10-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CpPa04_RS07100 f47dcd17d7bbe8b9bd94f68597ca15de 516 SUPERFAMILY SSF53623 133 343 9.81E-50 T 10-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CpPa04_RS07100 f47dcd17d7bbe8b9bd94f68597ca15de 516 Pfam PF02875 Mur ligase family, glutamate ligase domain 349 434 3.8E-14 T 10-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CpPa04_RS07100 f47dcd17d7bbe8b9bd94f68597ca15de 516 SUPERFAMILY SSF63418 1 88 4.45E-17 T 10-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CpPa04_RS07100 f47dcd17d7bbe8b9bd94f68597ca15de 516 Gene3D G3DSA:3.90.190.20 348 490 8.5E-35 T 10-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CpPa04_RS07100 f47dcd17d7bbe8b9bd94f68597ca15de 516 Pfam PF08245 Mur ligase middle domain 138 327 5.3E-43 T 10-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CpPa04_RS07100 f47dcd17d7bbe8b9bd94f68597ca15de 516 Pfam PF01225 Mur ligase family, catalytic domain 31 96 4.4E-9 T 10-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CpPa04_RS07100 f47dcd17d7bbe8b9bd94f68597ca15de 516 Gene3D G3DSA:3.40.1390.10 1 79 4.0E-21 T 10-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CpPa04_RS07100 f47dcd17d7bbe8b9bd94f68597ca15de 516 SUPERFAMILY SSF53244 349 489 3.2E-26 T 10-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CpPa04_RS03205 7d18c40d7e237ca1964ac7b0a4c52a14 84 SUPERFAMILY SSF52833 5 69 2.19E-13 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS03205 7d18c40d7e237ca1964ac7b0a4c52a14 84 Pfam PF00462 Glutaredoxin 6 59 2.8E-10 T 10-03-2017 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CpPa04_RS03205 7d18c40d7e237ca1964ac7b0a4c52a14 84 Gene3D G3DSA:3.40.30.10 5 71 1.3E-12 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS03205 7d18c40d7e237ca1964ac7b0a4c52a14 84 TIGRFAM TIGR02200 GlrX_actino: glutaredoxin-like protein 5 81 7.7E-32 T 10-03-2017 IPR011915 Glutaredoxin-like protein, actinobacteria CpPa04_RS07575 75c1d2cfa0dba3603a449277dc11b0fa 153 Gene3D G3DSA:3.40.50.270 1 150 3.2E-43 T 10-03-2017 CpPa04_RS07575 75c1d2cfa0dba3603a449277dc11b0fa 153 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 76 91 2.4E-7 T 10-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CpPa04_RS07575 75c1d2cfa0dba3603a449277dc11b0fa 153 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 43 59 2.4E-7 T 10-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CpPa04_RS07575 75c1d2cfa0dba3603a449277dc11b0fa 153 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 116 131 2.4E-7 T 10-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CpPa04_RS07575 75c1d2cfa0dba3603a449277dc11b0fa 153 SMART SM00226 2 144 5.4E-34 T 10-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily CpPa04_RS07575 75c1d2cfa0dba3603a449277dc11b0fa 153 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 1 142 1.7E-34 T 10-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily CpPa04_RS07575 75c1d2cfa0dba3603a449277dc11b0fa 153 SUPERFAMILY SSF52788 1 145 7.59E-39 T 10-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily CpPa04_RS01070 6f43d0c187ead861831dfa80119d4d4c 201 Pfam PF08534 Redoxin 82 178 2.5E-10 T 10-03-2017 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CpPa04_RS01070 6f43d0c187ead861831dfa80119d4d4c 201 SUPERFAMILY SSF52833 82 177 3.75E-20 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS01070 6f43d0c187ead861831dfa80119d4d4c 201 Gene3D G3DSA:3.40.30.10 79 187 3.0E-21 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS01070 6f43d0c187ead861831dfa80119d4d4c 201 ProSitePatterns PS00194 Thioredoxin family active site. 84 102 - T 10-03-2017 IPR017937 Thioredoxin, conserved site GO:0045454 CpPa04_RS09010 32f3db59acf119d80bd0e13337c43bf4 295 ProSitePatterns PS01155 Endonuclease III family signature. 105 134 - T 10-03-2017 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 CpPa04_RS09010 32f3db59acf119d80bd0e13337c43bf4 295 SMART SM00478 42 191 4.5E-51 T 10-03-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CpPa04_RS09010 32f3db59acf119d80bd0e13337c43bf4 295 SUPERFAMILY SSF48150 7 216 2.04E-66 T 10-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CpPa04_RS09010 32f3db59acf119d80bd0e13337c43bf4 295 Gene3D G3DSA:1.10.340.30 28 125 9.2E-40 T 10-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CpPa04_RS09010 32f3db59acf119d80bd0e13337c43bf4 295 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 39 156 1.8E-19 T 10-03-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CpPa04_RS09010 32f3db59acf119d80bd0e13337c43bf4 295 SMART SM00525 192 211 0.0034 T 10-03-2017 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CpPa04_RS09010 32f3db59acf119d80bd0e13337c43bf4 295 Gene3D G3DSA:1.10.1670.10 126 220 1.0E-33 T 10-03-2017 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CpPa04_RS09010 32f3db59acf119d80bd0e13337c43bf4 295 Pfam PF00633 Helix-hairpin-helix motif 103 131 3.4E-8 T 10-03-2017 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CpPa04_RS02080 a4866f70595ddc172ed5454be79dc6be 447 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 98 107 - T 10-03-2017 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02080 a4866f70595ddc172ed5454be79dc6be 447 Gene3D G3DSA:3.40.120.10 179 252 3.0E-24 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02080 a4866f70595ddc172ed5454be79dc6be 447 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 161 256 3.7E-19 T 10-03-2017 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02080 a4866f70595ddc172ed5454be79dc6be 447 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 366 1.4E-30 T 10-03-2017 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02080 a4866f70595ddc172ed5454be79dc6be 447 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 139 1.6E-41 T 10-03-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02080 a4866f70595ddc172ed5454be79dc6be 447 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 444 1.3E-11 T 10-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02080 a4866f70595ddc172ed5454be79dc6be 447 SUPERFAMILY SSF53738 260 366 1.81E-27 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02080 a4866f70595ddc172ed5454be79dc6be 447 SUPERFAMILY SSF53738 4 183 1.37E-45 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02080 a4866f70595ddc172ed5454be79dc6be 447 Gene3D G3DSA:3.40.120.10 3 136 5.0E-44 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02080 a4866f70595ddc172ed5454be79dc6be 447 SUPERFAMILY SSF53738 160 259 7.85E-27 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02080 a4866f70595ddc172ed5454be79dc6be 447 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 444 1.4E-172 T 10-03-2017 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02080 a4866f70595ddc172ed5454be79dc6be 447 Gene3D G3DSA:3.40.120.10 253 368 2.5E-31 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02080 a4866f70595ddc172ed5454be79dc6be 447 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 447 43.547 T 10-03-2017 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02080 a4866f70595ddc172ed5454be79dc6be 447 SUPERFAMILY SSF55957 361 446 3.01E-20 T 10-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02080 a4866f70595ddc172ed5454be79dc6be 447 Gene3D G3DSA:3.30.310.50 372 446 4.4E-18 T 10-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02080 a4866f70595ddc172ed5454be79dc6be 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 3.1E-12 T 10-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02080 a4866f70595ddc172ed5454be79dc6be 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 3.1E-12 T 10-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02080 a4866f70595ddc172ed5454be79dc6be 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 3.1E-12 T 10-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS07775 6f005bc7bbcb19a6b47cc6c19cc99530 384 Pfam PF04055 Radical SAM superfamily 12 190 5.1E-20 T 10-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CpPa04_RS07775 6f005bc7bbcb19a6b47cc6c19cc99530 384 Gene3D G3DSA:3.80.30.20 10 250 5.3E-36 T 10-03-2017 IPR023404 Radical SAM, alpha/beta horseshoe CpPa04_RS07775 6f005bc7bbcb19a6b47cc6c19cc99530 384 Pfam PF06969 HemN C-terminal domain 315 371 9.2E-8 T 10-03-2017 IPR010723 HemN, C-terminal CpPa04_RS07775 6f005bc7bbcb19a6b47cc6c19cc99530 384 SMART SM00729 7 235 2.9E-54 T 10-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CpPa04_RS07775 6f005bc7bbcb19a6b47cc6c19cc99530 384 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 10 341 5.6E-80 T 10-03-2017 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 CpPa04_RS07775 6f005bc7bbcb19a6b47cc6c19cc99530 384 SUPERFAMILY SSF102114 5 381 1.31E-105 T 10-03-2017 CpPa04_RS01520 324a121b43101379c4d30eacaab2d28a 537 PIRSF PIRSF004983 1 537 8.7E-127 T 10-03-2017 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CpPa04_RS01520 324a121b43101379c4d30eacaab2d28a 537 Gene3D G3DSA:3.40.50.970 307 530 1.8E-21 T 10-03-2017 IPR029061 Thiamin diphosphate-binding fold CpPa04_RS01520 324a121b43101379c4d30eacaab2d28a 537 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 8 397 4.0E-89 T 10-03-2017 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CpPa04_RS01520 324a121b43101379c4d30eacaab2d28a 537 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 8 126 4.1E-23 T 10-03-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CpPa04_RS01520 324a121b43101379c4d30eacaab2d28a 537 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 385 516 2.8E-8 T 10-03-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CpPa04_RS01520 324a121b43101379c4d30eacaab2d28a 537 Gene3D G3DSA:3.40.50.970 9 159 1.9E-34 T 10-03-2017 IPR029061 Thiamin diphosphate-binding fold CpPa04_RS01520 324a121b43101379c4d30eacaab2d28a 537 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 1 535 27.838 T 10-03-2017 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CpPa04_RS01520 324a121b43101379c4d30eacaab2d28a 537 SUPERFAMILY SSF52518 15 161 1.91E-26 T 10-03-2017 IPR029061 Thiamin diphosphate-binding fold CpPa04_RS01520 324a121b43101379c4d30eacaab2d28a 537 SUPERFAMILY SSF52518 338 532 4.15E-21 T 10-03-2017 IPR029061 Thiamin diphosphate-binding fold CpPa04_RS05780 22a08307cc85ad9410c18d60d87d7577 208 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 29 162 6.5E-32 T 10-03-2017 IPR011605 NusB antitermination factor GO:0006353 CpPa04_RS05780 22a08307cc85ad9410c18d60d87d7577 208 Gene3D G3DSA:1.10.940.10 28 166 1.0E-33 T 10-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CpPa04_RS05780 22a08307cc85ad9410c18d60d87d7577 208 Pfam PF01029 NusB family 31 160 1.0E-25 T 10-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CpPa04_RS05780 22a08307cc85ad9410c18d60d87d7577 208 SUPERFAMILY SSF48013 28 159 2.88E-29 T 10-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CpPa04_RS05780 22a08307cc85ad9410c18d60d87d7577 208 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 27 164 19.052 T 10-03-2017 IPR011605 NusB antitermination factor GO:0006353 CpPa04_RS08055 500135abc8c991deeee15392088cfdd7 316 SUPERFAMILY SSF51735 4 313 1.03E-67 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS08055 500135abc8c991deeee15392088cfdd7 316 Gene3D G3DSA:3.40.50.720 145 297 9.2E-41 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS08055 500135abc8c991deeee15392088cfdd7 316 Gene3D G3DSA:3.30.1780.10 7 144 2.2E-38 T 10-03-2017 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 CpPa04_RS08055 500135abc8c991deeee15392088cfdd7 316 PIRSF PIRSF001439 1 315 2.9E-62 T 10-03-2017 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 CpPa04_RS08055 500135abc8c991deeee15392088cfdd7 316 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 10 313 1.8E-42 T 10-03-2017 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 CpPa04_RS09340 df5da59e92b668806da87fc5718abe4f 450 PRINTS PR00419 Adrenodoxin reductase family signature 145 159 6.1E-20 T 10-03-2017 CpPa04_RS09340 df5da59e92b668806da87fc5718abe4f 450 PRINTS PR00419 Adrenodoxin reductase family signature 6 28 6.1E-20 T 10-03-2017 CpPa04_RS09340 df5da59e92b668806da87fc5718abe4f 450 PRINTS PR00419 Adrenodoxin reductase family signature 31 44 6.1E-20 T 10-03-2017 CpPa04_RS09340 df5da59e92b668806da87fc5718abe4f 450 PRINTS PR00419 Adrenodoxin reductase family signature 74 84 6.1E-20 T 10-03-2017 CpPa04_RS09340 df5da59e92b668806da87fc5718abe4f 450 Gene3D G3DSA:3.40.50.720 317 446 3.2E-76 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS09340 df5da59e92b668806da87fc5718abe4f 450 Gene3D G3DSA:3.40.50.720 4 95 3.2E-76 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS09340 df5da59e92b668806da87fc5718abe4f 450 Gene3D G3DSA:3.50.50.60 96 316 4.5E-65 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS09340 df5da59e92b668806da87fc5718abe4f 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 186 3.3E-12 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS09340 df5da59e92b668806da87fc5718abe4f 450 PIRSF PIRSF000362 1 450 1.6E-168 T 10-03-2017 IPR021163 Ferredoxin-NADP+ reductase, adrenodoxin-type GO:0016491|GO:0055114 Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CpPa04_RS09340 df5da59e92b668806da87fc5718abe4f 450 SUPERFAMILY SSF51971 4 211 1.41E-54 T 10-03-2017 CpPa04_RS09340 df5da59e92b668806da87fc5718abe4f 450 SUPERFAMILY SSF51971 260 317 1.41E-54 T 10-03-2017 CpPa04_RS03400 cb5eee80a19736924ed677bac59d62b5 421 Gene3D G3DSA:3.40.980.10 173 340 1.6E-42 T 10-03-2017 IPR001453 MoaB/Mog domain CpPa04_RS03400 cb5eee80a19736924ed677bac59d62b5 421 SUPERFAMILY SSF63882 3 185 1.05E-44 T 10-03-2017 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 CpPa04_RS03400 cb5eee80a19736924ed677bac59d62b5 421 SUPERFAMILY SSF53218 186 332 1.57E-26 T 10-03-2017 IPR001453 MoaB/Mog domain CpPa04_RS03400 cb5eee80a19736924ed677bac59d62b5 421 Gene3D G3DSA:2.40.340.10 341 418 5.8E-14 T 10-03-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 CpPa04_RS03400 cb5eee80a19736924ed677bac59d62b5 421 Gene3D G3DSA:2.170.190.11 44 140 8.4E-33 T 10-03-2017 CpPa04_RS03400 cb5eee80a19736924ed677bac59d62b5 421 Pfam PF03453 MoeA N-terminal region (domain I and II) 3 176 4.9E-31 T 10-03-2017 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 CpPa04_RS03400 cb5eee80a19736924ed677bac59d62b5 421 SUPERFAMILY SSF63867 337 418 6.02E-13 T 10-03-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 CpPa04_RS03400 cb5eee80a19736924ed677bac59d62b5 421 Gene3D G3DSA:3.90.105.10 141 172 2.1E-19 T 10-03-2017 CpPa04_RS03400 cb5eee80a19736924ed677bac59d62b5 421 SMART SM00852 189 328 1.1E-17 T 10-03-2017 IPR001453 MoaB/Mog domain CpPa04_RS03400 cb5eee80a19736924ed677bac59d62b5 421 Pfam PF00994 Probable molybdopterin binding domain 190 326 2.7E-13 T 10-03-2017 IPR001453 MoaB/Mog domain CpPa04_RS03400 cb5eee80a19736924ed677bac59d62b5 421 Pfam PF03454 MoeA C-terminal region (domain IV) 341 417 5.0E-13 T 10-03-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 CpPa04_RS04850 a2497dab49333091b578cba6701b7b2d 399 SUPERFAMILY SSF52402 3 165 3.53E-41 T 10-03-2017 CpPa04_RS04850 a2497dab49333091b578cba6701b7b2d 399 TIGRFAM TIGR00032 argG: argininosuccinate synthase 4 393 2.7E-138 T 10-03-2017 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CpPa04_RS04850 a2497dab49333091b578cba6701b7b2d 399 Pfam PF00764 Arginosuccinate synthase 6 390 1.1E-181 T 10-03-2017 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CpPa04_RS04850 a2497dab49333091b578cba6701b7b2d 399 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 117 128 - T 10-03-2017 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CpPa04_RS04850 a2497dab49333091b578cba6701b7b2d 399 Gene3D G3DSA:3.90.1260.10 174 397 3.9E-79 T 10-03-2017 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CpPa04_RS04850 a2497dab49333091b578cba6701b7b2d 399 Gene3D G3DSA:3.40.50.620 4 173 1.7E-54 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS04850 a2497dab49333091b578cba6701b7b2d 399 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 8 16 - T 10-03-2017 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CpPa04_RS04850 a2497dab49333091b578cba6701b7b2d 399 SUPERFAMILY SSF69864 171 396 7.46E-82 T 10-03-2017 CpPa04_RS04850 a2497dab49333091b578cba6701b7b2d 399 Hamap MF_00005 Argininosuccinate synthase [argG]. 2 396 50.42 T 10-03-2017 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CpPa04_RS03460 c705ab94915e3ce99f302875c884b550 383 Pfam PF03990 Domain of unknown function (DUF348) 45 84 8.6E-13 T 10-03-2017 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 CpPa04_RS03460 c705ab94915e3ce99f302875c884b550 383 Pfam PF03990 Domain of unknown function (DUF348) 164 202 2.5E-9 T 10-03-2017 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 CpPa04_RS03460 c705ab94915e3ce99f302875c884b550 383 SMART SM01208 215 293 1.3E-15 T 10-03-2017 IPR011098 G5 domain CpPa04_RS03460 c705ab94915e3ce99f302875c884b550 383 SUPERFAMILY SSF53955 299 382 1.29E-32 T 10-03-2017 IPR023346 Lysozyme-like domain CpPa04_RS03460 c705ab94915e3ce99f302875c884b550 383 Pfam PF06737 Transglycosylase-like domain 301 376 4.5E-34 T 10-03-2017 IPR010618 Transglycosylase-like CpPa04_RS03460 c705ab94915e3ce99f302875c884b550 383 Gene3D G3DSA:1.10.530.10 278 382 2.3E-43 T 10-03-2017 CpPa04_RS03460 c705ab94915e3ce99f302875c884b550 383 Pfam PF07501 G5 domain 219 292 3.4E-16 T 10-03-2017 IPR011098 G5 domain CpPa04_RS02545 85e13d349c4b4b630eb35afd29ce233c 522 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 115 285 7.6E-35 T 10-03-2017 IPR004474 Cell envelope-related transcriptional attenuator domain CpPa04_RS02545 85e13d349c4b4b630eb35afd29ce233c 522 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 390 476 1.4E-13 T 10-03-2017 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain CpPa04_RS02545 85e13d349c4b4b630eb35afd29ce233c 522 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 115 285 9.9E-41 T 10-03-2017 IPR004474 Cell envelope-related transcriptional attenuator domain CpPa04_RS08130 a620f649c39d09e9b28bf7206c4a328e 336 SUPERFAMILY SSF51182 27 293 8.9E-66 T 10-03-2017 IPR011051 RmlC-like cupin domain CpPa04_RS08130 a620f649c39d09e9b28bf7206c4a328e 336 PIRSF PIRSF006232 10 296 1.6E-75 T 10-03-2017 IPR012093 Pirin CpPa04_RS08130 a620f649c39d09e9b28bf7206c4a328e 336 Gene3D G3DSA:2.60.120.10 23 259 4.2E-58 T 10-03-2017 IPR014710 RmlC-like jelly roll fold CpPa04_RS08130 a620f649c39d09e9b28bf7206c4a328e 336 Pfam PF02678 Pirin 32 132 7.0E-30 T 10-03-2017 IPR003829 Pirin, N-terminal domain CpPa04_RS08130 a620f649c39d09e9b28bf7206c4a328e 336 Pfam PF05726 Pirin C-terminal cupin domain 186 283 1.1E-17 T 10-03-2017 IPR008778 Pirin, C-terminal domain CpPa04_RS08040 f5175705eaedf3691b95250ac3fe2091 1134 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 358 771 1.6E-148 T 10-03-2017 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CpPa04_RS08040 f5175705eaedf3691b95250ac3fe2091 1134 Gene3D G3DSA:2.40.50.140 377 466 4.5E-28 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS08040 f5175705eaedf3691b95250ac3fe2091 1134 SUPERFAMILY SSF50249 383 466 1.16E-15 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS08040 f5175705eaedf3691b95250ac3fe2091 1134 SMART SM00316 381 460 6.3E-6 T 10-03-2017 IPR022967 RNA-binding domain, S1 CpPa04_RS08040 f5175705eaedf3691b95250ac3fe2091 1134 Pfam PF10150 Ribonuclease E/G family 462 739 3.2E-102 T 10-03-2017 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CpPa04_RS08040 f5175705eaedf3691b95250ac3fe2091 1134 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 43 91 1.9E-8 T 10-03-2017 IPR006847 Translation initiation factor IF-2, N-terminal CpPa04_RS08490 0dc87b594604a3c5e388f693b095b550 40 Pfam PF00444 Ribosomal protein L36 1 40 9.2E-17 T 10-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS08490 0dc87b594604a3c5e388f693b095b550 40 SUPERFAMILY SSF57840 1 40 1.01E-11 T 10-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS08490 0dc87b594604a3c5e388f693b095b550 40 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 40 15.136 T 10-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS05460 09bf98d48339dddab4cf04145e6d3961 280 Pfam PF11296 Protein of unknown function (DUF3097) 7 270 1.6E-118 T 10-03-2017 IPR021447 Protein of unknown function DUF3097 CpPa04_RS04830 3501d517fdfb71a1813bdec7d1403dbf 311 SUPERFAMILY SSF53633 8 295 5.5E-82 T 10-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase CpPa04_RS04830 3501d517fdfb71a1813bdec7d1403dbf 311 PRINTS PR00474 Glutamate 5-kinase family signature 193 220 1.2E-6 T 10-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 CpPa04_RS04830 3501d517fdfb71a1813bdec7d1403dbf 311 PRINTS PR00474 Glutamate 5-kinase family signature 61 75 1.2E-6 T 10-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 CpPa04_RS04830 3501d517fdfb71a1813bdec7d1403dbf 311 PRINTS PR00474 Glutamate 5-kinase family signature 244 264 1.2E-6 T 10-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 CpPa04_RS04830 3501d517fdfb71a1813bdec7d1403dbf 311 Gene3D G3DSA:3.40.1160.10 28 293 2.7E-96 T 10-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase CpPa04_RS04830 3501d517fdfb71a1813bdec7d1403dbf 311 PIRSF PIRSF000728 15 294 7.9E-101 T 10-03-2017 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CpPa04_RS04830 3501d517fdfb71a1813bdec7d1403dbf 311 Pfam PF00696 Amino acid kinase family 30 270 2.9E-43 T 10-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase CpPa04_RS04830 3501d517fdfb71a1813bdec7d1403dbf 311 TIGRFAM TIGR00761 argB: acetylglutamate kinase 32 269 8.9E-73 T 10-03-2017 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CpPa04_RS04830 3501d517fdfb71a1813bdec7d1403dbf 311 Hamap MF_00082_B Acetylglutamate kinase [argB]. 28 294 33.702 T 10-03-2017 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CpPa04_RS08000 436b1df74f4245ead6a2d2a9cdfe3911 428 Gene3D G3DSA:3.40.309.10 235 385 1.6E-32 T 10-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CpPa04_RS08000 436b1df74f4245ead6a2d2a9cdfe3911 428 PIRSF PIRSF000151 7 428 9.4E-155 T 10-03-2017 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CpPa04_RS08000 436b1df74f4245ead6a2d2a9cdfe3911 428 Pfam PF00171 Aldehyde dehydrogenase family 4 293 8.9E-11 T 10-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CpPa04_RS08000 436b1df74f4245ead6a2d2a9cdfe3911 428 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 25 417 6.3E-131 T 10-03-2017 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CpPa04_RS08000 436b1df74f4245ead6a2d2a9cdfe3911 428 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 13 427 37.692 T 10-03-2017 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CpPa04_RS08000 436b1df74f4245ead6a2d2a9cdfe3911 428 SUPERFAMILY SSF53720 12 427 4.71E-104 T 10-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CpPa04_RS08000 436b1df74f4245ead6a2d2a9cdfe3911 428 Gene3D G3DSA:3.40.605.10 8 232 3.0E-97 T 10-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CpPa04_RS08000 436b1df74f4245ead6a2d2a9cdfe3911 428 Gene3D G3DSA:3.40.605.10 386 427 3.0E-97 T 10-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CpPa04_RS08000 436b1df74f4245ead6a2d2a9cdfe3911 428 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 334 355 - T 10-03-2017 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CpPa04_RS09330 c924b22a33ab03edb68d0c815b1d9630 400 Gene3D G3DSA:3.30.420.40 207 394 2.6E-75 T 10-03-2017 CpPa04_RS09330 c924b22a33ab03edb68d0c815b1d9630 400 Gene3D G3DSA:3.30.420.40 87 206 4.9E-7 T 10-03-2017 CpPa04_RS09330 c924b22a33ab03edb68d0c815b1d9630 400 Pfam PF00871 Acetokinase family 4 391 1.1E-150 T 10-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CpPa04_RS09330 c924b22a33ab03edb68d0c815b1d9630 400 SUPERFAMILY SSF53067 1 198 4.79E-60 T 10-03-2017 CpPa04_RS09330 c924b22a33ab03edb68d0c815b1d9630 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 4 15 - T 10-03-2017 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CpPa04_RS09330 c924b22a33ab03edb68d0c815b1d9630 400 PIRSF PIRSF000722 1 400 2.9E-140 T 10-03-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CpPa04_RS09330 c924b22a33ab03edb68d0c815b1d9630 400 TIGRFAM TIGR00016 ackA: acetate kinase 2 393 1.7E-135 T 10-03-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CpPa04_RS09330 c924b22a33ab03edb68d0c815b1d9630 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 172.734 T 10-03-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CpPa04_RS09330 c924b22a33ab03edb68d0c815b1d9630 400 PRINTS PR00471 Acetate kinase family signature 301 314 2.0E-42 T 10-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CpPa04_RS09330 c924b22a33ab03edb68d0c815b1d9630 400 PRINTS PR00471 Acetate kinase family signature 175 188 2.0E-42 T 10-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CpPa04_RS09330 c924b22a33ab03edb68d0c815b1d9630 400 PRINTS PR00471 Acetate kinase family signature 205 226 2.0E-42 T 10-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CpPa04_RS09330 c924b22a33ab03edb68d0c815b1d9630 400 PRINTS PR00471 Acetate kinase family signature 4 15 2.0E-42 T 10-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CpPa04_RS09330 c924b22a33ab03edb68d0c815b1d9630 400 PRINTS PR00471 Acetate kinase family signature 323 339 2.0E-42 T 10-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CpPa04_RS09330 c924b22a33ab03edb68d0c815b1d9630 400 PRINTS PR00471 Acetate kinase family signature 378 390 2.0E-42 T 10-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CpPa04_RS09330 c924b22a33ab03edb68d0c815b1d9630 400 SUPERFAMILY SSF53067 161 394 7.12E-81 T 10-03-2017 CpPa04_RS09330 c924b22a33ab03edb68d0c815b1d9630 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 205 222 - T 10-03-2017 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CpPa04_RS04535 8a60eae70bc793aafdb6709c923cf066 604 Pfam PF03235 Protein of unknown function DUF262 10 253 9.5E-24 T 10-03-2017 IPR004919 Domain of unknown function DUF262 CpPa04_RS02685 97f3bc8acafd1c1ca326eef101bc6c9f 167 Pfam PF04073 Aminoacyl-tRNA editing domain 38 154 3.1E-23 T 10-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CpPa04_RS02685 97f3bc8acafd1c1ca326eef101bc6c9f 167 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 10 164 1.6E-50 T 10-03-2017 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CpPa04_RS02685 97f3bc8acafd1c1ca326eef101bc6c9f 167 SUPERFAMILY SSF55826 10 164 3.01E-37 T 10-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CpPa04_RS02685 97f3bc8acafd1c1ca326eef101bc6c9f 167 Gene3D G3DSA:3.90.960.10 3 165 3.6E-52 T 10-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CpPa04_RS02685 97f3bc8acafd1c1ca326eef101bc6c9f 167 PIRSF PIRSF006181 5 167 1.2E-45 T 10-03-2017 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CpPa04_RS05835 b16113d1a7e52573e5ac65766561c571 890 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 870 1.0E-257 T 10-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CpPa04_RS05835 b16113d1a7e52573e5ac65766561c571 890 SUPERFAMILY SSF55681 2 250 8.2E-85 T 10-03-2017 CpPa04_RS05835 b16113d1a7e52573e5ac65766561c571 890 SUPERFAMILY SSF50447 465 563 9.77E-17 T 10-03-2017 IPR009000 Translation protein, beta-barrel domain CpPa04_RS05835 b16113d1a7e52573e5ac65766561c571 890 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 664 708 8.7E-16 T 10-03-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CpPa04_RS05835 b16113d1a7e52573e5ac65766561c571 890 SMART SM00863 664 708 1.9E-19 T 10-03-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CpPa04_RS05835 b16113d1a7e52573e5ac65766561c571 890 Pfam PF01411 tRNA synthetases class II (A) 5 566 5.5E-193 T 10-03-2017 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 CpPa04_RS05835 b16113d1a7e52573e5ac65766561c571 890 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 890 164.382 T 10-03-2017 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 CpPa04_RS05835 b16113d1a7e52573e5ac65766561c571 890 SUPERFAMILY SSF101353 251 450 1.31E-57 T 10-03-2017 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 CpPa04_RS05835 b16113d1a7e52573e5ac65766561c571 890 Gene3D G3DSA:3.30.930.10 2 246 2.0E-91 T 10-03-2017 CpPa04_RS05835 b16113d1a7e52573e5ac65766561c571 890 PRINTS PR00980 Alanyl-tRNA synthetase signature 283 299 2.2E-24 T 10-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CpPa04_RS05835 b16113d1a7e52573e5ac65766561c571 890 PRINTS PR00980 Alanyl-tRNA synthetase signature 71 82 2.2E-24 T 10-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CpPa04_RS05835 b16113d1a7e52573e5ac65766561c571 890 PRINTS PR00980 Alanyl-tRNA synthetase signature 231 244 2.2E-24 T 10-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CpPa04_RS05835 b16113d1a7e52573e5ac65766561c571 890 PRINTS PR00980 Alanyl-tRNA synthetase signature 198 209 2.2E-24 T 10-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CpPa04_RS05835 b16113d1a7e52573e5ac65766561c571 890 PRINTS PR00980 Alanyl-tRNA synthetase signature 307 320 2.2E-24 T 10-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CpPa04_RS05835 b16113d1a7e52573e5ac65766561c571 890 SUPERFAMILY SSF55186 563 723 1.11E-42 T 10-03-2017 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CpPa04_RS05835 b16113d1a7e52573e5ac65766561c571 890 Pfam PF02272 DHHA1 domain 816 884 2.1E-5 T 10-03-2017 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CpPa04_RS00440 b9bacdeeecb7f712867bb74ed790d4b5 106 Gene3D G3DSA:3.30.110.70 1 104 6.8E-35 T 10-03-2017 IPR002765 Uncharacterised protein family UPF0145 CpPa04_RS00440 b9bacdeeecb7f712867bb74ed790d4b5 106 Pfam PF01906 Putative heavy-metal-binding 1 104 2.2E-36 T 10-03-2017 IPR002765 Uncharacterised protein family UPF0145 CpPa04_RS00440 b9bacdeeecb7f712867bb74ed790d4b5 106 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 23.67 T 10-03-2017 IPR002765 Uncharacterised protein family UPF0145 CpPa04_RS00440 b9bacdeeecb7f712867bb74ed790d4b5 106 SUPERFAMILY SSF117782 1 105 1.83E-35 T 10-03-2017 IPR002765 Uncharacterised protein family UPF0145 CpPa04_RS08260 6292b465bc02212533dc2183e73ae55b 331 SUPERFAMILY SSF51735 120 290 1.39E-33 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS08260 6292b465bc02212533dc2183e73ae55b 331 Gene3D G3DSA:3.40.50.720 136 296 3.6E-70 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS08260 6292b465bc02212533dc2183e73ae55b 331 SUPERFAMILY SSF50129 17 147 3.04E-34 T 10-03-2017 IPR011032 GroES-like CpPa04_RS08260 6292b465bc02212533dc2183e73ae55b 331 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 91 7.8E-5 T 10-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CpPa04_RS08260 6292b465bc02212533dc2183e73ae55b 331 Pfam PF00107 Zinc-binding dehydrogenase 163 289 1.6E-13 T 10-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CpPa04_RS08260 6292b465bc02212533dc2183e73ae55b 331 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 7 330 4.2E-124 T 10-03-2017 IPR014188 Acrylyl-CoA reductase AcuI CpPa04_RS08260 6292b465bc02212533dc2183e73ae55b 331 Gene3D G3DSA:3.90.180.10 16 135 1.2E-6 T 10-03-2017 IPR011032 GroES-like CpPa04_RS08260 6292b465bc02212533dc2183e73ae55b 331 SMART SM00829 16 328 1.2E-4 T 10-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CpPa04_RS06595 b5aa57933da940655bb41d8711c4a9fa 294 Gene3D G3DSA:3.90.230.10 43 290 7.7E-92 T 10-03-2017 IPR000994 Peptidase M24, structural domain CpPa04_RS06595 b5aa57933da940655bb41d8711c4a9fa 294 Pfam PF00557 Metallopeptidase family M24 50 278 2.3E-50 T 10-03-2017 IPR000994 Peptidase M24, structural domain CpPa04_RS06595 b5aa57933da940655bb41d8711c4a9fa 294 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 43 285 4.8E-88 T 10-03-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 CpPa04_RS06595 b5aa57933da940655bb41d8711c4a9fa 294 SUPERFAMILY SSF55920 8 288 6.54E-83 T 10-03-2017 IPR000994 Peptidase M24, structural domain CpPa04_RS06595 b5aa57933da940655bb41d8711c4a9fa 294 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 204 222 - T 10-03-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 CpPa04_RS06595 b5aa57933da940655bb41d8711c4a9fa 294 Hamap MF_01974 Methionine aminopeptidase [map]. 41 287 38.996 T 10-03-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 CpPa04_RS06595 b5aa57933da940655bb41d8711c4a9fa 294 PRINTS PR00599 Methionine aminopeptidase-1 signature 229 241 3.0E-20 T 10-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase CpPa04_RS06595 b5aa57933da940655bb41d8711c4a9fa 294 PRINTS PR00599 Methionine aminopeptidase-1 signature 198 210 3.0E-20 T 10-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase CpPa04_RS06595 b5aa57933da940655bb41d8711c4a9fa 294 PRINTS PR00599 Methionine aminopeptidase-1 signature 128 144 3.0E-20 T 10-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase CpPa04_RS06595 b5aa57933da940655bb41d8711c4a9fa 294 PRINTS PR00599 Methionine aminopeptidase-1 signature 106 119 3.0E-20 T 10-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase CpPa04_RS01605 c8375058c46c4efe5d312fb7c027642e 357 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 335 3.8E-75 T 10-03-2017 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CpPa04_RS01605 c8375058c46c4efe5d312fb7c027642e 357 SUPERFAMILY SSF51395 1 355 3.4E-109 T 10-03-2017 CpPa04_RS01605 c8375058c46c4efe5d312fb7c027642e 357 Gene3D G3DSA:3.20.20.70 1 357 5.6E-114 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS05620 230ce3a11bc43fa58d3f063e013a5735 939 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 583 595 - T 10-03-2017 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CpPa04_RS05620 230ce3a11bc43fa58d3f063e013a5735 939 Gene3D G3DSA:1.20.1440.90 292 418 1.2E-23 T 10-03-2017 CpPa04_RS05620 230ce3a11bc43fa58d3f063e013a5735 939 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 5 939 18.459 T 10-03-2017 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CpPa04_RS05620 230ce3a11bc43fa58d3f063e013a5735 939 Pfam PF00311 Phosphoenolpyruvate carboxylase 140 939 1.1E-256 T 10-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CpPa04_RS05620 230ce3a11bc43fa58d3f063e013a5735 939 SUPERFAMILY SSF51621 17 939 2.51E-276 T 10-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CpPa04_RS05620 230ce3a11bc43fa58d3f063e013a5735 939 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 415 435 1.6E-56 T 10-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CpPa04_RS05620 230ce3a11bc43fa58d3f063e013a5735 939 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 758 784 1.6E-56 T 10-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CpPa04_RS05620 230ce3a11bc43fa58d3f063e013a5735 939 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 263 278 1.6E-56 T 10-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CpPa04_RS05620 230ce3a11bc43fa58d3f063e013a5735 939 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 623 652 1.6E-56 T 10-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CpPa04_RS05620 230ce3a11bc43fa58d3f063e013a5735 939 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 143 156 1.6E-56 T 10-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CpPa04_RS05620 230ce3a11bc43fa58d3f063e013a5735 939 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 202 218 1.6E-56 T 10-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CpPa04_RS05620 230ce3a11bc43fa58d3f063e013a5735 939 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 581 601 1.6E-56 T 10-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CpPa04_RS05620 230ce3a11bc43fa58d3f063e013a5735 939 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 144 155 - T 10-03-2017 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CpPa04_RS01155 3f82a77e9b60c19f035b82a51136c4d2 978 SUPERFAMILY SSF56712 8 590 1.01E-176 T 10-03-2017 IPR023405 DNA topoisomerase, type IA, core domain CpPa04_RS01155 3f82a77e9b60c19f035b82a51136c4d2 978 Pfam PF01751 Toprim domain 10 131 2.1E-26 T 10-03-2017 IPR006171 Toprim domain CpPa04_RS01155 3f82a77e9b60c19f035b82a51136c4d2 978 Gene3D G3DSA:3.40.50.140 8 152 9.2E-47 T 10-03-2017 IPR006171 Toprim domain CpPa04_RS01155 3f82a77e9b60c19f035b82a51136c4d2 978 Hamap MF_00952 DNA topoisomerase 1 [topA]. 8 826 52.211 T 10-03-2017 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 CpPa04_RS01155 3f82a77e9b60c19f035b82a51136c4d2 978 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 10 654 1.9E-244 T 10-03-2017 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 CpPa04_RS01155 3f82a77e9b60c19f035b82a51136c4d2 978 Pfam PF13368 Topoisomerase C-terminal repeat 884 933 2.5E-17 T 10-03-2017 IPR025589 Topoisomerase C-terminal repeat CpPa04_RS01155 3f82a77e9b60c19f035b82a51136c4d2 978 Pfam PF13368 Topoisomerase C-terminal repeat 814 868 1.3E-15 T 10-03-2017 IPR025589 Topoisomerase C-terminal repeat CpPa04_RS01155 3f82a77e9b60c19f035b82a51136c4d2 978 Pfam PF13368 Topoisomerase C-terminal repeat 700 723 9.6E-6 T 10-03-2017 IPR025589 Topoisomerase C-terminal repeat CpPa04_RS01155 3f82a77e9b60c19f035b82a51136c4d2 978 Pfam PF13368 Topoisomerase C-terminal repeat 636 693 2.9E-9 T 10-03-2017 IPR025589 Topoisomerase C-terminal repeat CpPa04_RS01155 3f82a77e9b60c19f035b82a51136c4d2 978 Pfam PF01131 DNA topoisomerase 146 586 5.8E-125 T 10-03-2017 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CpPa04_RS01155 3f82a77e9b60c19f035b82a51136c4d2 978 SMART SM00436 122 210 2.1E-45 T 10-03-2017 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CpPa04_RS01155 3f82a77e9b60c19f035b82a51136c4d2 978 SMART SM00437 283 549 1.2E-125 T 10-03-2017 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CpPa04_RS01155 3f82a77e9b60c19f035b82a51136c4d2 978 Gene3D G3DSA:2.70.20.10 353 495 3.2E-32 T 10-03-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CpPa04_RS01155 3f82a77e9b60c19f035b82a51136c4d2 978 Gene3D G3DSA:2.70.20.10 202 347 6.5E-28 T 10-03-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CpPa04_RS01155 3f82a77e9b60c19f035b82a51136c4d2 978 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 320 334 - T 10-03-2017 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CpPa04_RS01155 3f82a77e9b60c19f035b82a51136c4d2 978 SMART SM00493 8 122 2.2E-33 T 10-03-2017 IPR006171 Toprim domain CpPa04_RS01155 3f82a77e9b60c19f035b82a51136c4d2 978 Gene3D G3DSA:1.10.460.10 496 590 5.8E-51 T 10-03-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CpPa04_RS01155 3f82a77e9b60c19f035b82a51136c4d2 978 Gene3D G3DSA:1.10.460.10 153 200 5.8E-51 T 10-03-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CpPa04_RS01155 3f82a77e9b60c19f035b82a51136c4d2 978 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 325 334 4.8E-35 T 10-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CpPa04_RS01155 3f82a77e9b60c19f035b82a51136c4d2 978 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 512 526 4.8E-35 T 10-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CpPa04_RS01155 3f82a77e9b60c19f035b82a51136c4d2 978 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 404 420 4.8E-35 T 10-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CpPa04_RS01155 3f82a77e9b60c19f035b82a51136c4d2 978 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 96 109 4.8E-35 T 10-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CpPa04_RS01155 3f82a77e9b60c19f035b82a51136c4d2 978 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 180 198 4.8E-35 T 10-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CpPa04_RS03995 44eed6605176b32fd0ded1a0d520178d 483 Gene3D G3DSA:2.60.120.560 313 355 8.8E-4 T 10-03-2017 IPR013189 Glycosyl hydrolase family 32, C-terminal CpPa04_RS03995 44eed6605176b32fd0ded1a0d520178d 483 Gene3D G3DSA:2.60.120.560 363 471 3.7E-11 T 10-03-2017 IPR013189 Glycosyl hydrolase family 32, C-terminal CpPa04_RS03995 44eed6605176b32fd0ded1a0d520178d 483 SUPERFAMILY SSF75005 3 337 2.36E-38 T 10-03-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CpPa04_RS03995 44eed6605176b32fd0ded1a0d520178d 483 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 8 337 3.3E-22 T 10-03-2017 IPR013148 Glycosyl hydrolase family 32, N-terminal CpPa04_RS03995 44eed6605176b32fd0ded1a0d520178d 483 SMART SM00640 8 432 1.7E-15 T 10-03-2017 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 CpPa04_RS03995 44eed6605176b32fd0ded1a0d520178d 483 SUPERFAMILY SSF49899 354 458 1.66E-14 T 10-03-2017 IPR013320 Concanavalin A-like lectin/glucanase domain CpPa04_RS06160 fa16c5fd65fa77ccfc87596348ef7d23 569 SMART SM00487 1 180 7.5E-13 T 10-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CpPa04_RS06160 fa16c5fd65fa77ccfc87596348ef7d23 569 Pfam PF04851 Type III restriction enzyme, res subunit 4 156 7.3E-15 T 10-03-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CpPa04_RS06160 fa16c5fd65fa77ccfc87596348ef7d23 569 SUPERFAMILY SSF52540 249 368 4.16E-16 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06160 fa16c5fd65fa77ccfc87596348ef7d23 569 SUPERFAMILY SSF52540 118 188 4.16E-16 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06160 fa16c5fd65fa77ccfc87596348ef7d23 569 Gene3D G3DSA:3.40.50.300 3 160 7.0E-21 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06160 fa16c5fd65fa77ccfc87596348ef7d23 569 Gene3D G3DSA:3.40.50.300 259 370 3.4E-7 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06160 fa16c5fd65fa77ccfc87596348ef7d23 569 SUPERFAMILY SSF52540 4 162 1.18E-25 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09835 07a7e807b598fba0a06a34e04c7ee8eb 371 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 57 368 1.7E-52 T 10-03-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CpPa04_RS09835 07a7e807b598fba0a06a34e04c7ee8eb 371 Gene3D G3DSA:3.20.20.300 72 368 1.2E-62 T 10-03-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CpPa04_RS09835 07a7e807b598fba0a06a34e04c7ee8eb 371 SUPERFAMILY SSF51445 100 368 1.16E-57 T 10-03-2017 IPR017853 Glycoside hydrolase superfamily CpPa04_RS03810 9b79bf3163e1a2c86cc002c8f8dfbeeb 546 Pfam PF00664 ABC transporter transmembrane region 57 268 1.4E-17 T 10-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CpPa04_RS03810 9b79bf3163e1a2c86cc002c8f8dfbeeb 546 Gene3D G3DSA:3.40.50.300 334 544 2.1E-52 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03810 9b79bf3163e1a2c86cc002c8f8dfbeeb 546 SMART SM00382 362 546 2.3E-6 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS03810 9b79bf3163e1a2c86cc002c8f8dfbeeb 546 SUPERFAMILY SSF90123 10 317 2.09E-30 T 10-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CpPa04_RS03810 9b79bf3163e1a2c86cc002c8f8dfbeeb 546 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS03810 9b79bf3163e1a2c86cc002c8f8dfbeeb 546 SUPERFAMILY SSF52540 332 545 2.4E-55 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03810 9b79bf3163e1a2c86cc002c8f8dfbeeb 546 Gene3D G3DSA:1.20.1560.10 13 313 7.0E-23 T 10-03-2017 CpPa04_RS03810 9b79bf3163e1a2c86cc002c8f8dfbeeb 546 Pfam PF00005 ABC transporter 354 502 6.3E-25 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS06030 a70c11020a0c8ffc00e6da5ebc799558 435 SUPERFAMILY SSF54909 73 419 1.11E-78 T 10-03-2017 IPR011008 Dimeric alpha-beta barrel CpPa04_RS06030 a70c11020a0c8ffc00e6da5ebc799558 435 Pfam PF04261 Dyp-type peroxidase family 78 417 3.7E-76 T 10-03-2017 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CpPa04_RS06030 a70c11020a0c8ffc00e6da5ebc799558 435 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 78 417 3.6E-66 T 10-03-2017 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CpPa04_RS07770 ffa88cfeed3b02392a5a056f0e6b3328 339 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 9 76 5.2E-5 T 10-03-2017 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 CpPa04_RS07770 ffa88cfeed3b02392a5a056f0e6b3328 339 PIRSF PIRSF005485 2 339 1.3E-88 T 10-03-2017 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 CpPa04_RS07770 ffa88cfeed3b02392a5a056f0e6b3328 339 SUPERFAMILY SSF55781 74 338 1.55E-50 T 10-03-2017 IPR029016 GAF domain-like CpPa04_RS07770 ffa88cfeed3b02392a5a056f0e6b3328 339 Gene3D G3DSA:3.30.450.40 178 338 1.2E-33 T 10-03-2017 IPR029016 GAF domain-like CpPa04_RS07770 ffa88cfeed3b02392a5a056f0e6b3328 339 SUPERFAMILY SSF46785 6 85 2.23E-22 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS07770 ffa88cfeed3b02392a5a056f0e6b3328 339 Gene3D G3DSA:1.10.10.10 3 87 8.2E-35 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS07770 ffa88cfeed3b02392a5a056f0e6b3328 339 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 7 338 1.1E-84 T 10-03-2017 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 CpPa04_RS07770 ffa88cfeed3b02392a5a056f0e6b3328 339 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 4 338 25.999 T 10-03-2017 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 CpPa04_RS07770 ffa88cfeed3b02392a5a056f0e6b3328 339 Pfam PF01628 HrcA protein C terminal domain 106 331 4.5E-57 T 10-03-2017 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 CpPa04_RS06505 57878b424cb18d11bb367e207dd8f5a9 332 SUPERFAMILY SSF54814 267 330 3.18E-15 T 10-03-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 CpPa04_RS06505 57878b424cb18d11bb367e207dd8f5a9 332 SMART SM00322 218 303 0.0091 T 10-03-2017 IPR004087 K Homology domain GO:0003676 CpPa04_RS06505 57878b424cb18d11bb367e207dd8f5a9 332 Gene3D G3DSA:2.40.50.140 110 186 1.9E-23 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS06505 57878b424cb18d11bb367e207dd8f5a9 332 Pfam PF13184 NusA-like KH domain 218 286 2.3E-23 T 10-03-2017 IPR025249 KH domain, NusA-like GO:0003723 CpPa04_RS06505 57878b424cb18d11bb367e207dd8f5a9 332 Gene3D G3DSA:3.30.1480.10 3 103 2.1E-18 T 10-03-2017 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CpPa04_RS06505 57878b424cb18d11bb367e207dd8f5a9 332 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 79 330 1.8E-90 T 10-03-2017 IPR010213 Transcription termination factor NusA GO:0003723 CpPa04_RS06505 57878b424cb18d11bb367e207dd8f5a9 332 SUPERFAMILY SSF69705 3 103 6.28E-20 T 10-03-2017 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CpPa04_RS06505 57878b424cb18d11bb367e207dd8f5a9 332 Gene3D G3DSA:3.30.300.20 266 330 6.8E-29 T 10-03-2017 IPR015946 K homology domain-like, alpha/beta CpPa04_RS06505 57878b424cb18d11bb367e207dd8f5a9 332 SUPERFAMILY SSF54814 188 266 2.68E-27 T 10-03-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 CpPa04_RS06505 57878b424cb18d11bb367e207dd8f5a9 332 Gene3D G3DSA:3.30.300.20 187 265 9.9E-33 T 10-03-2017 IPR015946 K homology domain-like, alpha/beta CpPa04_RS06505 57878b424cb18d11bb367e207dd8f5a9 332 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 1 332 22.996 T 10-03-2017 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 CpPa04_RS06505 57878b424cb18d11bb367e207dd8f5a9 332 SUPERFAMILY SSF50249 113 187 1.86E-15 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS05455 fe774809c0f56308e3a8baceb1afa0c6 142 SUPERFAMILY SSF141322 79 140 5.1E-6 T 10-03-2017 CpPa04_RS05455 fe774809c0f56308e3a8baceb1afa0c6 142 Pfam PF01957 NfeD-like C-terminal, partner-binding 5 141 1.2E-26 T 10-03-2017 IPR002810 NfeD-like, C-terminal domain CpPa04_RS05455 fe774809c0f56308e3a8baceb1afa0c6 142 Gene3D G3DSA:2.40.50.140 81 141 4.1E-25 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS06235 402eac4fb2cf9ded1ff961edc227e993 1332 Gene3D G3DSA:3.40.50.300 311 451 1.6E-9 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06235 402eac4fb2cf9ded1ff961edc227e993 1332 Gene3D G3DSA:3.40.50.300 104 260 2.1E-48 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06235 402eac4fb2cf9ded1ff961edc227e993 1332 SMART SM00487 101 291 4.4E-28 T 10-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CpPa04_RS06235 402eac4fb2cf9ded1ff961edc227e993 1332 SUPERFAMILY SSF52540 102 639 5.1E-104 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06235 402eac4fb2cf9ded1ff961edc227e993 1332 SMART SM00382 119 274 1.7E-4 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS06235 402eac4fb2cf9ded1ff961edc227e993 1332 SMART SM00490 342 438 7.0E-12 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS06235 402eac4fb2cf9ded1ff961edc227e993 1332 Pfam PF04408 Helicase associated domain (HA2) 502 591 6.0E-17 T 10-03-2017 IPR007502 Helicase-associated domain GO:0004386 CpPa04_RS06235 402eac4fb2cf9ded1ff961edc227e993 1332 SMART SM00847 498 593 4.5E-32 T 10-03-2017 IPR007502 Helicase-associated domain GO:0004386 CpPa04_RS06235 402eac4fb2cf9ded1ff961edc227e993 1332 Pfam PF00270 DEAD/DEAH box helicase 109 260 1.8E-7 T 10-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CpPa04_RS06235 402eac4fb2cf9ded1ff961edc227e993 1332 Pfam PF11898 Domain of unknown function (DUF3418) 749 1331 2.9E-184 T 10-03-2017 IPR024590 RNA helicase HrpA, C-terminal CpPa04_RS06235 402eac4fb2cf9ded1ff961edc227e993 1332 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 48 1331 0.0 T 10-03-2017 IPR010222 RNA helicase HrpA GO:0004004 CpPa04_RS06235 402eac4fb2cf9ded1ff961edc227e993 1332 Pfam PF00271 Helicase conserved C-terminal domain 324 437 6.7E-9 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS06235 402eac4fb2cf9ded1ff961edc227e993 1332 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 656 735 1.3E-15 T 10-03-2017 IPR011709 Domain of unknown function DUF1605 CpPa04_RS08835 7405fa314576bee715b2c8b99f3acadd 479 PRINTS PR00149 Fumarate lyase superfamily signature 101 119 2.1E-9 T 10-03-2017 IPR000362 Fumarate lyase family CpPa04_RS08835 7405fa314576bee715b2c8b99f3acadd 479 PRINTS PR00149 Fumarate lyase superfamily signature 283 299 2.1E-9 T 10-03-2017 IPR000362 Fumarate lyase family CpPa04_RS08835 7405fa314576bee715b2c8b99f3acadd 479 PRINTS PR00149 Fumarate lyase superfamily signature 146 164 2.1E-9 T 10-03-2017 IPR000362 Fumarate lyase family CpPa04_RS08835 7405fa314576bee715b2c8b99f3acadd 479 ProSitePatterns PS00163 Fumarate lyases signature. 283 292 - T 10-03-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 CpPa04_RS08835 7405fa314576bee715b2c8b99f3acadd 479 Gene3D G3DSA:1.10.275.10 16 104 1.8E-23 T 10-03-2017 IPR024083 Fumarase/histidase, N-terminal CpPa04_RS08835 7405fa314576bee715b2c8b99f3acadd 479 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 14 456 1.8E-127 T 10-03-2017 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CpPa04_RS08835 7405fa314576bee715b2c8b99f3acadd 479 SUPERFAMILY SSF48557 13 458 9.9E-84 T 10-03-2017 IPR008948 L-Aspartase-like GO:0003824 CpPa04_RS08835 7405fa314576bee715b2c8b99f3acadd 479 Gene3D G3DSA:1.20.200.10 105 455 3.4E-82 T 10-03-2017 CpPa04_RS08835 7405fa314576bee715b2c8b99f3acadd 479 SMART SM00998 372 457 2.5E-25 T 10-03-2017 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CpPa04_RS08835 7405fa314576bee715b2c8b99f3acadd 479 Pfam PF10397 Adenylosuccinate lyase C-terminus 373 456 2.2E-15 T 10-03-2017 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CpPa04_RS08835 7405fa314576bee715b2c8b99f3acadd 479 Pfam PF00206 Lyase 39 299 1.3E-18 T 10-03-2017 IPR022761 Fumarate lyase, N-terminal CpPa04_RS04340 1b8563d5639babfaa6314c9a5b32c97b 152 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 19 134 1.2E-18 T 10-03-2017 CpPa04_RS04340 1b8563d5639babfaa6314c9a5b32c97b 152 SUPERFAMILY SSF54593 16 151 1.75E-31 T 10-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CpPa04_RS04340 1b8563d5639babfaa6314c9a5b32c97b 152 Gene3D G3DSA:3.10.180.10 18 149 5.0E-35 T 10-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CpPa04_RS04340 1b8563d5639babfaa6314c9a5b32c97b 152 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 17 149 9.7E-43 T 10-03-2017 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|Reactome: R-HSA-71032 CpPa04_RS01100 a583a597f71b97f6bf5a1cfc03b781dd 290 Gene3D G3DSA:3.40.50.1000 105 251 7.8E-51 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS01100 a583a597f71b97f6bf5a1cfc03b781dd 290 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 33 221 3.0E-30 T 10-03-2017 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 CpPa04_RS01100 a583a597f71b97f6bf5a1cfc03b781dd 290 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 34 232 2.9E-59 T 10-03-2017 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial CpPa04_RS01100 a583a597f71b97f6bf5a1cfc03b781dd 290 SUPERFAMILY SSF56784 31 242 1.08E-32 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS01100 a583a597f71b97f6bf5a1cfc03b781dd 290 Pfam PF12710 haloacid dehalogenase-like hydrolase 34 219 2.5E-36 T 10-03-2017 CpPa04_RS04665 d3867815806bd15fd82d48faf5643063 571 Pfam PF13684 Dihydroxyacetone kinase family 262 533 4.8E-39 T 10-03-2017 IPR033470 Uncharacterised protein, DhaK domain CpPa04_RS04665 d3867815806bd15fd82d48faf5643063 571 SMART SM01120 37 212 2.2E-43 T 10-03-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CpPa04_RS04665 d3867815806bd15fd82d48faf5643063 571 SUPERFAMILY SSF101473 5 213 7.06E-33 T 10-03-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CpPa04_RS04665 d3867815806bd15fd82d48faf5643063 571 SMART SM01121 258 571 3.8E-29 T 10-03-2017 IPR033470 Uncharacterised protein, DhaK domain CpPa04_RS04665 d3867815806bd15fd82d48faf5643063 571 Pfam PF02734 DAK2 domain 37 211 1.0E-28 T 10-03-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CpPa04_RS09760 a570b4c7e74ed985381ade6d8fc61d6d 569 SUPERFAMILY SSF51556 483 569 2.23E-184 T 10-03-2017 IPR032466 Metal-dependent hydrolase CpPa04_RS09760 a570b4c7e74ed985381ade6d8fc61d6d 569 SUPERFAMILY SSF51556 131 434 2.23E-184 T 10-03-2017 IPR032466 Metal-dependent hydrolase CpPa04_RS09760 a570b4c7e74ed985381ade6d8fc61d6d 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 403 418 1.0E-32 T 10-03-2017 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CpPa04_RS09760 a570b4c7e74ed985381ade6d8fc61d6d 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 429 442 1.0E-32 T 10-03-2017 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CpPa04_RS09760 a570b4c7e74ed985381ade6d8fc61d6d 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 336 352 1.0E-32 T 10-03-2017 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CpPa04_RS09760 a570b4c7e74ed985381ade6d8fc61d6d 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 297 314 1.0E-32 T 10-03-2017 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CpPa04_RS09760 a570b4c7e74ed985381ade6d8fc61d6d 569 ProSitePatterns PS01120 Urease nickel ligands signature. 129 142 - T 10-03-2017 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CpPa04_RS09760 a570b4c7e74ed985381ade6d8fc61d6d 569 ProSitePatterns PS00145 Urease active site. 319 335 - T 10-03-2017 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CpPa04_RS09760 a570b4c7e74ed985381ade6d8fc61d6d 569 Pfam PF00449 Urease alpha-subunit, N-terminal domain 4 121 1.1E-50 T 10-03-2017 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CpPa04_RS09760 a570b4c7e74ed985381ade6d8fc61d6d 569 Pfam PF01979 Amidohydrolase family 127 455 3.1E-72 T 10-03-2017 IPR006680 Amidohydrolase-related GO:0016787 CpPa04_RS09760 a570b4c7e74ed985381ade6d8fc61d6d 569 Gene3D G3DSA:3.20.20.140 490 567 2.6E-194 T 10-03-2017 CpPa04_RS09760 a570b4c7e74ed985381ade6d8fc61d6d 569 Gene3D G3DSA:3.20.20.140 146 431 2.6E-194 T 10-03-2017 CpPa04_RS09760 a570b4c7e74ed985381ade6d8fc61d6d 569 Hamap MF_01953 Urease subunit alpha [ureC]. 3 569 54.669 T 10-03-2017 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CpPa04_RS09760 a570b4c7e74ed985381ade6d8fc61d6d 569 Gene3D G3DSA:2.30.40.10 69 145 2.8E-13 T 10-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CpPa04_RS09760 a570b4c7e74ed985381ade6d8fc61d6d 569 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 569 1.4E-281 T 10-03-2017 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CpPa04_RS09760 a570b4c7e74ed985381ade6d8fc61d6d 569 SUPERFAMILY SSF51338 424 474 2.25E-55 T 10-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CpPa04_RS09760 a570b4c7e74ed985381ade6d8fc61d6d 569 SUPERFAMILY SSF51338 5 131 2.25E-55 T 10-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CpPa04_RS07700 b19f29a4f096dfa16d5d2eacf21733fe 461 Gene3D G3DSA:3.30.930.10 9 362 3.1E-132 T 10-03-2017 CpPa04_RS07700 b19f29a4f096dfa16d5d2eacf21733fe 461 Gene3D G3DSA:3.40.50.800 363 457 2.3E-41 T 10-03-2017 IPR004154 Anticodon-binding CpPa04_RS07700 b19f29a4f096dfa16d5d2eacf21733fe 461 Pfam PF03129 Anticodon binding domain 367 456 1.0E-24 T 10-03-2017 IPR004154 Anticodon-binding CpPa04_RS07700 b19f29a4f096dfa16d5d2eacf21733fe 461 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 4 459 47.663 T 10-03-2017 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 CpPa04_RS07700 b19f29a4f096dfa16d5d2eacf21733fe 461 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 8 233 1.1E-74 T 10-03-2017 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CpPa04_RS07700 b19f29a4f096dfa16d5d2eacf21733fe 461 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 158 255 5.3E-9 T 10-03-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS07700 b19f29a4f096dfa16d5d2eacf21733fe 461 SUPERFAMILY SSF55681 8 370 4.11E-116 T 10-03-2017 CpPa04_RS07700 b19f29a4f096dfa16d5d2eacf21733fe 461 PRINTS PR01043 Glycyl-tRNA synthetase signature 191 208 3.9E-53 T 10-03-2017 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CpPa04_RS07700 b19f29a4f096dfa16d5d2eacf21733fe 461 PRINTS PR01043 Glycyl-tRNA synthetase signature 159 176 3.9E-53 T 10-03-2017 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CpPa04_RS07700 b19f29a4f096dfa16d5d2eacf21733fe 461 PRINTS PR01043 Glycyl-tRNA synthetase signature 26 40 3.9E-53 T 10-03-2017 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CpPa04_RS07700 b19f29a4f096dfa16d5d2eacf21733fe 461 PRINTS PR01043 Glycyl-tRNA synthetase signature 208 218 3.9E-53 T 10-03-2017 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CpPa04_RS07700 b19f29a4f096dfa16d5d2eacf21733fe 461 PRINTS PR01043 Glycyl-tRNA synthetase signature 404 423 3.9E-53 T 10-03-2017 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CpPa04_RS07700 b19f29a4f096dfa16d5d2eacf21733fe 461 PRINTS PR01043 Glycyl-tRNA synthetase signature 138 150 3.9E-53 T 10-03-2017 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CpPa04_RS07700 b19f29a4f096dfa16d5d2eacf21733fe 461 PRINTS PR01043 Glycyl-tRNA synthetase signature 318 330 3.9E-53 T 10-03-2017 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CpPa04_RS07700 b19f29a4f096dfa16d5d2eacf21733fe 461 SUPERFAMILY SSF52954 354 458 1.51E-34 T 10-03-2017 IPR004154 Anticodon-binding CpPa04_RS07655 bf5aa3c3a5793d010ed866262e6415bb 638 SUPERFAMILY SSF57783 5 101 4.76E-29 T 10-03-2017 CpPa04_RS07655 bf5aa3c3a5793d010ed866262e6415bb 638 Pfam PF10410 DnaB-helicase binding domain of primase 377 430 1.6E-15 T 10-03-2017 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 CpPa04_RS07655 bf5aa3c3a5793d010ed866262e6415bb 638 SUPERFAMILY SSF56731 119 432 7.32E-95 T 10-03-2017 CpPa04_RS07655 bf5aa3c3a5793d010ed866262e6415bb 638 Pfam PF08275 DNA primase catalytic core, N-terminal domain 129 256 6.8E-36 T 10-03-2017 IPR013264 DNA primase, catalytic core, N-terminal CpPa04_RS07655 bf5aa3c3a5793d010ed866262e6415bb 638 PIRSF PIRSF002811 3 630 4.2E-140 T 10-03-2017 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CpPa04_RS07655 bf5aa3c3a5793d010ed866262e6415bb 638 Gene3D G3DSA:3.90.580.10 4 102 1.2E-33 T 10-03-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CpPa04_RS07655 bf5aa3c3a5793d010ed866262e6415bb 638 Pfam PF08278 DNA primase DnaG DnaB-binding 486 616 2.0E-22 T 10-03-2017 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 CpPa04_RS07655 bf5aa3c3a5793d010ed866262e6415bb 638 Gene3D G3DSA:1.20.50.20 377 432 5.1E-12 T 10-03-2017 CpPa04_RS07655 bf5aa3c3a5793d010ed866262e6415bb 638 Gene3D G3DSA:3.40.1360.10 245 374 3.8E-41 T 10-03-2017 CpPa04_RS07655 bf5aa3c3a5793d010ed866262e6415bb 638 SMART SM00493 263 341 1.6E-12 T 10-03-2017 IPR006171 Toprim domain CpPa04_RS07655 bf5aa3c3a5793d010ed866262e6415bb 638 Pfam PF01807 CHC2 zinc finger 7 102 6.3E-28 T 10-03-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CpPa04_RS07655 bf5aa3c3a5793d010ed866262e6415bb 638 TIGRFAM TIGR01391 dnaG: DNA primase 5 423 3.3E-110 T 10-03-2017 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 CpPa04_RS07655 bf5aa3c3a5793d010ed866262e6415bb 638 SMART SM00766 485 619 1.4E-18 T 10-03-2017 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 CpPa04_RS07655 bf5aa3c3a5793d010ed866262e6415bb 638 Pfam PF13662 Toprim domain 264 336 1.2E-14 T 10-03-2017 IPR006171 Toprim domain CpPa04_RS07655 bf5aa3c3a5793d010ed866262e6415bb 638 Hamap MF_00974 DNA primase [dnaG]. 5 638 24.631 T 10-03-2017 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CpPa04_RS07655 bf5aa3c3a5793d010ed866262e6415bb 638 Gene3D G3DSA:3.90.980.10 119 244 3.7E-36 T 10-03-2017 IPR013264 DNA primase, catalytic core, N-terminal CpPa04_RS07655 bf5aa3c3a5793d010ed866262e6415bb 638 SMART SM00400 38 92 2.3E-21 T 10-03-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CpPa04_RS00220 a222bd6fb6e5ebdf46d59e5e37b297f1 256 SMART SM00382 27 211 6.1E-17 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS00220 a222bd6fb6e5ebdf46d59e5e37b297f1 256 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS00220 a222bd6fb6e5ebdf46d59e5e37b297f1 256 SUPERFAMILY SSF52540 3 224 1.52E-59 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00220 a222bd6fb6e5ebdf46d59e5e37b297f1 256 Gene3D G3DSA:3.40.50.300 3 231 1.9E-60 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00220 a222bd6fb6e5ebdf46d59e5e37b297f1 256 Pfam PF00005 ABC transporter 19 167 3.2E-31 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS03600 101caaadf1f698d6c5c29ad75da8aca8 215 SUPERFAMILY SSF46689 2 79 4.99E-20 T 10-03-2017 IPR009057 Homeodomain-like GO:0003677 CpPa04_RS03600 101caaadf1f698d6c5c29ad75da8aca8 215 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 57 - T 10-03-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CpPa04_RS03600 101caaadf1f698d6c5c29ad75da8aca8 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 7.0E-10 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS03600 101caaadf1f698d6c5c29ad75da8aca8 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 7.0E-10 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS03600 101caaadf1f698d6c5c29ad75da8aca8 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 4.6E-17 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS03600 101caaadf1f698d6c5c29ad75da8aca8 215 SUPERFAMILY SSF48498 83 193 3.83E-8 T 10-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CpPa04_RS03600 101caaadf1f698d6c5c29ad75da8aca8 215 Gene3D G3DSA:1.10.357.10 3 194 8.7E-48 T 10-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CpPa04_RS00560 832a54ceff36b12f9cf94dfe87701fda 241 Gene3D G3DSA:3.40.50.300 8 235 1.8E-58 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00560 832a54ceff36b12f9cf94dfe87701fda 241 SUPERFAMILY SSF52540 9 230 7.48E-54 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00560 832a54ceff36b12f9cf94dfe87701fda 241 SMART SM00382 33 224 9.6E-7 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS00560 832a54ceff36b12f9cf94dfe87701fda 241 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS00560 832a54ceff36b12f9cf94dfe87701fda 241 Pfam PF00005 ABC transporter 24 169 9.6E-27 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS10685 9dad68ed99bca8129fd1e6a3c720b61a 330 Pfam PF13614 AAA domain 38 215 3.3E-59 T 10-03-2017 IPR025669 AAA domain CpPa04_RS10685 9dad68ed99bca8129fd1e6a3c720b61a 330 Gene3D G3DSA:3.40.50.300 37 289 1.0E-70 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS10685 9dad68ed99bca8129fd1e6a3c720b61a 330 SUPERFAMILY SSF52540 36 291 8.92E-66 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01620 2c0d4b3afa6bcb44782f26c79c593567 317 TIGRFAM TIGR03769 P_ac_wall_RPT: actinobacterial surface-anchored protein domain 176 212 4.4E-14 T 10-03-2017 IPR022435 Surface-anchored repeat, actinobacteria CpPa04_RS07910 5ed155b368f2e490de95e2dd4137d92d 358 SUPERFAMILY SSF53850 1 344 2.04E-53 T 10-03-2017 CpPa04_RS07910 5ed155b368f2e490de95e2dd4137d92d 358 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 1 277 3.0E-35 T 10-03-2017 IPR000914 Solute-binding protein family 5 domain CpPa04_RS07910 5ed155b368f2e490de95e2dd4137d92d 358 Gene3D G3DSA:3.10.105.10 137 325 6.0E-27 T 10-03-2017 CpPa04_RS07910 5ed155b368f2e490de95e2dd4137d92d 358 Gene3D G3DSA:3.40.190.10 39 136 6.3E-22 T 10-03-2017 CpPa04_RS09765 14aee51553f07d8d0276106fd7643ce4 103 Pfam PF00699 Urease beta subunit 3 101 3.8E-45 T 10-03-2017 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CpPa04_RS09765 14aee51553f07d8d0276106fd7643ce4 103 SUPERFAMILY SSF51278 1 103 1.05E-45 T 10-03-2017 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CpPa04_RS09765 14aee51553f07d8d0276106fd7643ce4 103 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 103 3.5E-45 T 10-03-2017 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CpPa04_RS09765 14aee51553f07d8d0276106fd7643ce4 103 Hamap MF_01954 Urease subunit beta [ureB]. 1 102 32.374 T 10-03-2017 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CpPa04_RS09765 14aee51553f07d8d0276106fd7643ce4 103 Gene3D G3DSA:2.10.150.10 1 103 6.0E-50 T 10-03-2017 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CpPa04_RS03365 90b414460e64b617c7c7e2f38531fd1d 484 SMART SM00228 398 470 1.2E-10 T 10-03-2017 IPR001478 PDZ domain GO:0005515 CpPa04_RS03365 90b414460e64b617c7c7e2f38531fd1d 484 Gene3D G3DSA:2.40.10.10 281 403 1.3E-41 T 10-03-2017 CpPa04_RS03365 90b414460e64b617c7c7e2f38531fd1d 484 Gene3D G3DSA:2.30.42.10 411 482 4.5E-16 T 10-03-2017 IPR001478 PDZ domain GO:0005515 CpPa04_RS03365 90b414460e64b617c7c7e2f38531fd1d 484 Pfam PF13180 PDZ domain 398 481 5.3E-16 T 10-03-2017 IPR001478 PDZ domain GO:0005515 CpPa04_RS03365 90b414460e64b617c7c7e2f38531fd1d 484 Pfam PF13365 Trypsin-like peptidase domain 205 350 2.4E-33 T 10-03-2017 CpPa04_RS03365 90b414460e64b617c7c7e2f38531fd1d 484 PRINTS PR00834 HtrA/DegQ protease family signature 321 338 6.5E-46 T 10-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CpPa04_RS03365 90b414460e64b617c7c7e2f38531fd1d 484 PRINTS PR00834 HtrA/DegQ protease family signature 343 360 6.5E-46 T 10-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CpPa04_RS03365 90b414460e64b617c7c7e2f38531fd1d 484 PRINTS PR00834 HtrA/DegQ protease family signature 239 259 6.5E-46 T 10-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CpPa04_RS03365 90b414460e64b617c7c7e2f38531fd1d 484 PRINTS PR00834 HtrA/DegQ protease family signature 214 226 6.5E-46 T 10-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CpPa04_RS03365 90b414460e64b617c7c7e2f38531fd1d 484 PRINTS PR00834 HtrA/DegQ protease family signature 280 304 6.5E-46 T 10-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CpPa04_RS03365 90b414460e64b617c7c7e2f38531fd1d 484 PRINTS PR00834 HtrA/DegQ protease family signature 428 440 6.5E-46 T 10-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CpPa04_RS03365 90b414460e64b617c7c7e2f38531fd1d 484 SUPERFAMILY SSF50156 368 476 4.99E-18 T 10-03-2017 IPR001478 PDZ domain GO:0005515 CpPa04_RS03365 90b414460e64b617c7c7e2f38531fd1d 484 Gene3D G3DSA:2.40.10.10 199 280 1.5E-28 T 10-03-2017 CpPa04_RS03365 90b414460e64b617c7c7e2f38531fd1d 484 SUPERFAMILY SSF50494 174 405 5.45E-56 T 10-03-2017 IPR009003 Peptidase S1, PA clan CpPa04_RS05450 a61001883b07fd7fe40bc0f734d3323a 402 ProSitePatterns PS01270 Band 7 protein family signature. 132 160 - T 10-03-2017 IPR018080 Band 7/stomatin-like, conserved site CpPa04_RS05450 a61001883b07fd7fe40bc0f734d3323a 402 Pfam PF01145 SPFH domain / Band 7 family 22 191 1.6E-33 T 10-03-2017 IPR001107 Band 7 domain CpPa04_RS05450 a61001883b07fd7fe40bc0f734d3323a 402 PRINTS PR00721 Stomatin signature 25 47 1.7E-29 T 10-03-2017 IPR001972 Stomatin family GO:0016020 CpPa04_RS05450 a61001883b07fd7fe40bc0f734d3323a 402 PRINTS PR00721 Stomatin signature 171 192 1.7E-29 T 10-03-2017 IPR001972 Stomatin family GO:0016020 CpPa04_RS05450 a61001883b07fd7fe40bc0f734d3323a 402 PRINTS PR00721 Stomatin signature 73 94 1.7E-29 T 10-03-2017 IPR001972 Stomatin family GO:0016020 CpPa04_RS05450 a61001883b07fd7fe40bc0f734d3323a 402 PRINTS PR00721 Stomatin signature 152 170 1.7E-29 T 10-03-2017 IPR001972 Stomatin family GO:0016020 CpPa04_RS05450 a61001883b07fd7fe40bc0f734d3323a 402 PRINTS PR00721 Stomatin signature 108 125 1.7E-29 T 10-03-2017 IPR001972 Stomatin family GO:0016020 CpPa04_RS05450 a61001883b07fd7fe40bc0f734d3323a 402 PRINTS PR00721 Stomatin signature 128 151 1.7E-29 T 10-03-2017 IPR001972 Stomatin family GO:0016020 CpPa04_RS05450 a61001883b07fd7fe40bc0f734d3323a 402 SMART SM00244 18 176 4.7E-48 T 10-03-2017 IPR001107 Band 7 domain CpPa04_RS05450 a61001883b07fd7fe40bc0f734d3323a 402 SUPERFAMILY SSF117892 49 183 6.54E-38 T 10-03-2017 IPR001107 Band 7 domain CpPa04_RS00455 fedee1b52279a90c3ea5bd0424898448 96 SUPERFAMILY SSF46767 5 65 2.49E-13 T 10-03-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CpPa04_RS00455 fedee1b52279a90c3ea5bd0424898448 96 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 9 62 1.3E-13 T 10-03-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CpPa04_RS00455 fedee1b52279a90c3ea5bd0424898448 96 Gene3D G3DSA:1.10.10.10 5 64 3.3E-12 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS10535 283092cc4bcad69b0799ce9e3711f5b6 59 Gene3D G3DSA:3.30.160.160 4 48 1.8E-20 T 10-03-2017 IPR010879 Domain of unknown function DUF1508 CpPa04_RS10535 283092cc4bcad69b0799ce9e3711f5b6 59 Pfam PF07411 Domain of unknown function (DUF1508) 10 57 2.9E-19 T 10-03-2017 IPR010879 Domain of unknown function DUF1508 CpPa04_RS10535 283092cc4bcad69b0799ce9e3711f5b6 59 SUPERFAMILY SSF160113 3 58 3.4E-17 T 10-03-2017 IPR010879 Domain of unknown function DUF1508 CpPa04_RS08420 beef29d58cdd0a8a046f8560a252fe2e 452 SUPERFAMILY SSF51690 151 443 3.24E-83 T 10-03-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CpPa04_RS08420 beef29d58cdd0a8a046f8560a252fe2e 452 Gene3D G3DSA:3.20.140.10 20 385 1.8E-93 T 10-03-2017 CpPa04_RS08420 beef29d58cdd0a8a046f8560a252fe2e 452 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 168 355 7.1E-8 T 10-03-2017 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CpPa04_RS08420 beef29d58cdd0a8a046f8560a252fe2e 452 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 24 439 8.9E-126 T 10-03-2017 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CpPa04_RS08420 beef29d58cdd0a8a046f8560a252fe2e 452 SUPERFAMILY SSF54675 21 148 7.46E-37 T 10-03-2017 CpPa04_RS08420 beef29d58cdd0a8a046f8560a252fe2e 452 PIRSF PIRSF000484 16 444 3.5E-98 T 10-03-2017 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CpPa04_RS05800 d6add3d9b728155cc18a33397d7756c5 359 Gene3D G3DSA:3.40.50.1970 7 170 1.7E-55 T 10-03-2017 CpPa04_RS05800 d6add3d9b728155cc18a33397d7756c5 359 SUPERFAMILY SSF56796 1 352 2.22E-103 T 10-03-2017 CpPa04_RS05800 d6add3d9b728155cc18a33397d7756c5 359 Pfam PF01761 3-dehydroquinate synthase 65 321 1.2E-95 T 10-03-2017 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CpPa04_RS05800 d6add3d9b728155cc18a33397d7756c5 359 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 12 342 4.3E-110 T 10-03-2017 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CpPa04_RS05800 d6add3d9b728155cc18a33397d7756c5 359 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 353 37.264 T 10-03-2017 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CpPa04_RS05800 d6add3d9b728155cc18a33397d7756c5 359 Gene3D G3DSA:1.20.1090.10 171 352 4.8E-59 T 10-03-2017 CpPa04_RS05800 d6add3d9b728155cc18a33397d7756c5 359 PIRSF PIRSF001455 3 356 2.8E-98 T 10-03-2017 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CpPa04_RS03350 4ba2feeb5830fc5d7d51370b89d2d63c 57 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 36 1.6E-9 T 10-03-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS03350 4ba2feeb5830fc5d7d51370b89d2d63c 57 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 53 13.184 T 10-03-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS03350 4ba2feeb5830fc5d7d51370b89d2d63c 57 SUPERFAMILY SSF57829 1 39 8.55E-8 T 10-03-2017 IPR011332 Zinc-binding ribosomal protein GO:0006412 CpPa04_RS03350 4ba2feeb5830fc5d7d51370b89d2d63c 57 Pfam PF01783 Ribosomal L32p protein family 2 46 2.7E-11 T 10-03-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS06305 6b198fc8c5b9aa889752170f6f775058 539 Hamap MF_00900 GTPase HflX [hflX]. 136 508 46.785 T 10-03-2017 IPR016496 GTPase HflX GO:0005525 CpPa04_RS06305 6b198fc8c5b9aa889752170f6f775058 539 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 316 336 2.7E-6 T 10-03-2017 IPR006073 GTP binding domain GO:0005525 CpPa04_RS06305 6b198fc8c5b9aa889752170f6f775058 539 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 383 401 2.7E-6 T 10-03-2017 IPR006073 GTP binding domain GO:0005525 CpPa04_RS06305 6b198fc8c5b9aa889752170f6f775058 539 Pfam PF01926 50S ribosome-binding GTPase 315 438 1.2E-20 T 10-03-2017 IPR006073 GTP binding domain GO:0005525 CpPa04_RS06305 6b198fc8c5b9aa889752170f6f775058 539 Pfam PF13167 GTP-binding GTPase N-terminal 134 221 2.4E-33 T 10-03-2017 IPR025121 GTPase HflX, N-terminal CpPa04_RS06305 6b198fc8c5b9aa889752170f6f775058 539 Pfam PF16360 GTP-binding GTPase Middle Region 223 308 1.2E-24 T 10-03-2017 IPR032305 GTP-binding protein, middle domain CpPa04_RS06305 6b198fc8c5b9aa889752170f6f775058 539 SUPERFAMILY SSF52540 307 482 9.3E-40 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06305 6b198fc8c5b9aa889752170f6f775058 539 Gene3D G3DSA:3.40.50.300 314 476 5.4E-35 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06305 6b198fc8c5b9aa889752170f6f775058 539 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 117 476 3.3E-126 T 10-03-2017 IPR016496 GTPase HflX GO:0005525 CpPa04_RS05905 ad77cfb56f19d7a34c482ae9ba601a81 423 Pfam PF03129 Anticodon binding domain 333 420 1.8E-12 T 10-03-2017 IPR004154 Anticodon-binding CpPa04_RS05905 ad77cfb56f19d7a34c482ae9ba601a81 423 Gene3D G3DSA:3.40.50.800 331 421 7.2E-26 T 10-03-2017 IPR004154 Anticodon-binding CpPa04_RS05905 ad77cfb56f19d7a34c482ae9ba601a81 423 PIRSF PIRSF001549 6 423 3.8E-106 T 10-03-2017 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 CpPa04_RS05905 ad77cfb56f19d7a34c482ae9ba601a81 423 Gene3D G3DSA:3.30.930.10 8 189 7.6E-84 T 10-03-2017 CpPa04_RS05905 ad77cfb56f19d7a34c482ae9ba601a81 423 Gene3D G3DSA:3.30.930.10 223 324 7.6E-84 T 10-03-2017 CpPa04_RS05905 ad77cfb56f19d7a34c482ae9ba601a81 423 Pfam PF13393 Histidyl-tRNA synthetase 15 313 4.2E-41 T 10-03-2017 CpPa04_RS05905 ad77cfb56f19d7a34c482ae9ba601a81 423 SUPERFAMILY SSF52954 330 420 1.18E-21 T 10-03-2017 IPR004154 Anticodon-binding CpPa04_RS05905 ad77cfb56f19d7a34c482ae9ba601a81 423 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 11 411 1.2E-135 T 10-03-2017 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CpPa04_RS05905 ad77cfb56f19d7a34c482ae9ba601a81 423 SUPERFAMILY SSF55681 9 319 4.02E-84 T 10-03-2017 CpPa04_RS05905 ad77cfb56f19d7a34c482ae9ba601a81 423 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 7 421 31.41 T 10-03-2017 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CpPa04_RS09745 6254619eebff49fa3846c251f5be06c6 204 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 4 199 1.7E-97 T 10-03-2017 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 CpPa04_RS09745 6254619eebff49fa3846c251f5be06c6 204 SUPERFAMILY SSF52540 4 195 5.68E-34 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09745 6254619eebff49fa3846c251f5be06c6 204 Hamap MF_01389 Urease accessory protein UreG [ureG]. 2 200 45.527 T 10-03-2017 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 CpPa04_RS09745 6254619eebff49fa3846c251f5be06c6 204 PIRSF PIRSF005624 1 201 1.6E-49 T 10-03-2017 CpPa04_RS09745 6254619eebff49fa3846c251f5be06c6 204 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 175 8.6E-35 T 10-03-2017 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CpPa04_RS09745 6254619eebff49fa3846c251f5be06c6 204 Gene3D G3DSA:3.40.50.300 4 194 2.9E-18 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05365 9a9d986e7245244a398f3ef01f2e18d5 370 Pfam PF01180 Dihydroorotate dehydrogenase 60 348 4.0E-93 T 10-03-2017 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CpPa04_RS05365 9a9d986e7245244a398f3ef01f2e18d5 370 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 95 114 - T 10-03-2017 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CpPa04_RS05365 9a9d986e7245244a398f3ef01f2e18d5 370 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 13 364 3.9E-128 T 10-03-2017 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CpPa04_RS05365 9a9d986e7245244a398f3ef01f2e18d5 370 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 12 345 46.72 T 10-03-2017 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CpPa04_RS05365 9a9d986e7245244a398f3ef01f2e18d5 370 Gene3D G3DSA:3.20.20.70 12 365 1.1E-122 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS05365 9a9d986e7245244a398f3ef01f2e18d5 370 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 301 321 - T 10-03-2017 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CpPa04_RS05365 9a9d986e7245244a398f3ef01f2e18d5 370 SUPERFAMILY SSF51395 18 364 1.04E-99 T 10-03-2017 CpPa04_RS00105 140f6e5e4b0f2094d67c693fb0b1c150 178 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 133 9.1E-27 T 10-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CpPa04_RS00105 140f6e5e4b0f2094d67c693fb0b1c150 178 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 134 149 9.1E-27 T 10-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CpPa04_RS00105 140f6e5e4b0f2094d67c693fb0b1c150 178 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 106 121 9.1E-27 T 10-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CpPa04_RS00105 140f6e5e4b0f2094d67c693fb0b1c150 178 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 25 40 9.1E-27 T 10-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CpPa04_RS00105 140f6e5e4b0f2094d67c693fb0b1c150 178 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 66 78 9.1E-27 T 10-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CpPa04_RS00105 140f6e5e4b0f2094d67c693fb0b1c150 178 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 13 175 1.3E-44 T 10-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CpPa04_RS00105 140f6e5e4b0f2094d67c693fb0b1c150 178 SUPERFAMILY SSF50891 11 176 8.47E-61 T 10-03-2017 IPR029000 Cyclophilin-like domain CpPa04_RS00105 140f6e5e4b0f2094d67c693fb0b1c150 178 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 61 78 - T 10-03-2017 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CpPa04_RS00105 140f6e5e4b0f2094d67c693fb0b1c150 178 PIRSF PIRSF001467 1 178 6.4E-57 T 10-03-2017 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 CpPa04_RS00105 140f6e5e4b0f2094d67c693fb0b1c150 178 Gene3D G3DSA:2.40.100.10 8 177 4.3E-62 T 10-03-2017 IPR029000 Cyclophilin-like domain CpPa04_RS00475 a61d483b1d0844d114aff14755b842ad 241 Gene3D G3DSA:1.20.1080.10 8 239 4.6E-66 T 10-03-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CpPa04_RS00475 a61d483b1d0844d114aff14755b842ad 241 PRINTS PR00783 Major intrinsic protein family signature 5 24 4.2E-26 T 10-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CpPa04_RS00475 a61d483b1d0844d114aff14755b842ad 241 PRINTS PR00783 Major intrinsic protein family signature 175 197 4.2E-26 T 10-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CpPa04_RS00475 a61d483b1d0844d114aff14755b842ad 241 PRINTS PR00783 Major intrinsic protein family signature 223 241 4.2E-26 T 10-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CpPa04_RS00475 a61d483b1d0844d114aff14755b842ad 241 PRINTS PR00783 Major intrinsic protein family signature 46 70 4.2E-26 T 10-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CpPa04_RS00475 a61d483b1d0844d114aff14755b842ad 241 PRINTS PR00783 Major intrinsic protein family signature 83 102 4.2E-26 T 10-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CpPa04_RS00475 a61d483b1d0844d114aff14755b842ad 241 PRINTS PR00783 Major intrinsic protein family signature 146 164 4.2E-26 T 10-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CpPa04_RS00475 a61d483b1d0844d114aff14755b842ad 241 SUPERFAMILY SSF81338 7 239 1.31E-52 T 10-03-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CpPa04_RS00475 a61d483b1d0844d114aff14755b842ad 241 Pfam PF00230 Major intrinsic protein 10 238 2.2E-33 T 10-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CpPa04_RS04905 dea80810188bda4a6fab225de80807e0 319 SUPERFAMILY SSF111331 12 304 1.15E-76 T 10-03-2017 IPR016064 NAD kinase/diacylglycerol kinase-like domain CpPa04_RS04905 dea80810188bda4a6fab225de80807e0 319 Hamap MF_00361 NAD kinase [nadK]. 10 298 28.663 T 10-03-2017 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CpPa04_RS04905 dea80810188bda4a6fab225de80807e0 319 Gene3D G3DSA:3.40.50.10330 11 157 8.8E-33 T 10-03-2017 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CpPa04_RS04905 dea80810188bda4a6fab225de80807e0 319 Gene3D G3DSA:2.60.200.30 158 272 1.9E-35 T 10-03-2017 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CpPa04_RS04905 dea80810188bda4a6fab225de80807e0 319 Pfam PF01513 ATP-NAD kinase 61 283 1.8E-60 T 10-03-2017 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CpPa04_RS04130 cd8ce9283ec8a95a671e0322922b144a 148 SUPERFAMILY SSF54593 8 145 1.73E-24 T 10-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CpPa04_RS04130 cd8ce9283ec8a95a671e0322922b144a 148 Gene3D G3DSA:3.10.180.10 18 147 3.8E-33 T 10-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CpPa04_RS04130 cd8ce9283ec8a95a671e0322922b144a 148 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 18 144 8.8E-7 T 10-03-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CpPa04_RS01700 a8aa3e9ca788d83eafa19178a471bcae 228 Gene3D G3DSA:3.20.20.70 35 206 8.1E-21 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS01700 a8aa3e9ca788d83eafa19178a471bcae 228 SUPERFAMILY SSF102114 36 203 3.92E-21 T 10-03-2017 CpPa04_RS01700 a8aa3e9ca788d83eafa19178a471bcae 228 Pfam PF13353 4Fe-4S single cluster domain 35 92 4.2E-6 T 10-03-2017 CpPa04_RS01700 a8aa3e9ca788d83eafa19178a471bcae 228 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 20 213 9.5E-50 T 10-03-2017 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein CpPa04_RS01700 a8aa3e9ca788d83eafa19178a471bcae 228 Pfam PF04055 Radical SAM superfamily 40 191 3.5E-17 T 10-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CpPa04_RS07185 54f661201a250a15b67f6b1a2dfa6944 436 Pfam PF01757 Acyltransferase family 91 397 5.7E-19 T 10-03-2017 IPR002656 Acyltransferase 3 GO:0016747 CpPa04_RS04550 2de5b581b261ad680e7604c6fb468875 339 SUPERFAMILY SSF53659 2 333 1.59E-103 T 10-03-2017 CpPa04_RS04550 2de5b581b261ad680e7604c6fb468875 339 Gene3D G3DSA:3.40.718.10 2 331 2.8E-112 T 10-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CpPa04_RS04550 2de5b581b261ad680e7604c6fb468875 339 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 2 326 1.3E-88 T 10-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CpPa04_RS04550 2de5b581b261ad680e7604c6fb468875 339 Hamap MF_01035 3-isopropylmalate dehydrogenase [leuB]. 1 337 57.634 T 10-03-2017 IPR023698 3-isopropylmalate dehydrogenase GO:0003862|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CpPa04_RS04550 2de5b581b261ad680e7604c6fb468875 339 SMART SM01329 2 333 3.2E-152 T 10-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CpPa04_RS04550 2de5b581b261ad680e7604c6fb468875 339 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 232 251 - T 10-03-2017 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CpPa04_RS08195 195dad2384b73b19f89a01a513cd73ad 492 Pfam PF00881 Nitroreductase family 392 479 8.2E-6 T 10-03-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 CpPa04_RS08195 195dad2384b73b19f89a01a513cd73ad 492 Gene3D G3DSA:3.40.109.10 401 480 3.2E-8 T 10-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CpPa04_RS08195 195dad2384b73b19f89a01a513cd73ad 492 SUPERFAMILY SSF55469 400 486 2.28E-9 T 10-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CpPa04_RS08700 28386bc62669a0a330401392eac81645 381 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 5 331 8.8E-114 T 10-03-2017 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 CpPa04_RS08700 28386bc62669a0a330401392eac81645 381 Gene3D G3DSA:3.20.20.70 10 263 4.3E-78 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS08700 28386bc62669a0a330401392eac81645 381 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 104 122 - T 10-03-2017 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CpPa04_RS08700 28386bc62669a0a330401392eac81645 381 SUPERFAMILY SSF51395 14 329 4.3E-77 T 10-03-2017 CpPa04_RS08700 28386bc62669a0a330401392eac81645 381 Pfam PF01207 Dihydrouridine synthase (Dus) 16 330 4.8E-98 T 10-03-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CpPa04_RS08700 28386bc62669a0a330401392eac81645 381 PIRSF PIRSF006621 2 344 6.6E-110 T 10-03-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CpPa04_RS08700 28386bc62669a0a330401392eac81645 381 Gene3D G3DSA:1.10.1200.80 267 338 1.4E-23 T 10-03-2017 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 CpPa04_RS07615 69e01dcd4e52cee12ff57bfba6bcebe8 273 PIRSF PIRSF000915 4 259 3.5E-55 T 10-03-2017 IPR006357 HAD-superfamily hydrolase, subfamily IIA CpPa04_RS07615 69e01dcd4e52cee12ff57bfba6bcebe8 273 Pfam PF13242 HAD-hyrolase-like 181 254 5.9E-24 T 10-03-2017 CpPa04_RS07615 69e01dcd4e52cee12ff57bfba6bcebe8 273 SUPERFAMILY SSF56784 5 255 1.63E-63 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS07615 69e01dcd4e52cee12ff57bfba6bcebe8 273 Gene3D G3DSA:3.40.50.1000 5 78 3.6E-39 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS07615 69e01dcd4e52cee12ff57bfba6bcebe8 273 Gene3D G3DSA:3.40.50.1000 181 256 3.6E-39 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS07615 69e01dcd4e52cee12ff57bfba6bcebe8 273 Gene3D G3DSA:3.40.50.10410 88 180 8.8E-32 T 10-03-2017 IPR023215 Nitrophenylphosphatase-like domain CpPa04_RS07615 69e01dcd4e52cee12ff57bfba6bcebe8 273 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 6 230 5.5E-47 T 10-03-2017 IPR006357 HAD-superfamily hydrolase, subfamily IIA CpPa04_RS07615 69e01dcd4e52cee12ff57bfba6bcebe8 273 Pfam PF13344 Haloacid dehalogenase-like hydrolase 6 108 4.8E-23 T 10-03-2017 IPR006357 HAD-superfamily hydrolase, subfamily IIA CpPa04_RS03215 065c188900cb8d09e6e21867b643ac06 265 SUPERFAMILY SSF55831 4 265 3.14E-123 T 10-03-2017 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 CpPa04_RS03215 065c188900cb8d09e6e21867b643ac06 265 Pfam PF00303 Thymidylate synthase 5 265 2.5E-117 T 10-03-2017 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 CpPa04_RS03215 065c188900cb8d09e6e21867b643ac06 265 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 5 87 2.7E-35 T 10-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 CpPa04_RS03215 065c188900cb8d09e6e21867b643ac06 265 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 87 265 6.9E-87 T 10-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 CpPa04_RS03215 065c188900cb8d09e6e21867b643ac06 265 ProSitePatterns PS00091 Thymidylate synthase active site. 128 156 - T 10-03-2017 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 CpPa04_RS03215 065c188900cb8d09e6e21867b643ac06 265 PRINTS PR00108 Thymidylate synthase family signature 44 65 1.0E-48 T 10-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 CpPa04_RS03215 065c188900cb8d09e6e21867b643ac06 265 PRINTS PR00108 Thymidylate synthase family signature 161 187 1.0E-48 T 10-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 CpPa04_RS03215 065c188900cb8d09e6e21867b643ac06 265 PRINTS PR00108 Thymidylate synthase family signature 143 158 1.0E-48 T 10-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 CpPa04_RS03215 065c188900cb8d09e6e21867b643ac06 265 PRINTS PR00108 Thymidylate synthase family signature 199 216 1.0E-48 T 10-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 CpPa04_RS03215 065c188900cb8d09e6e21867b643ac06 265 PRINTS PR00108 Thymidylate synthase family signature 117 136 1.0E-48 T 10-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 CpPa04_RS03215 065c188900cb8d09e6e21867b643ac06 265 Hamap MF_00008 Thymidylate synthase [thyA]. 3 265 38.625 T 10-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 CpPa04_RS03215 065c188900cb8d09e6e21867b643ac06 265 Gene3D G3DSA:3.30.572.10 5 265 8.8E-126 T 10-03-2017 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 CpPa04_RS05940 42343dc16fb23d1b13f34253ec355573 546 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 108 368 4.1E-14 T 10-03-2017 IPR000914 Solute-binding protein family 5 domain CpPa04_RS05940 42343dc16fb23d1b13f34253ec355573 546 Gene3D G3DSA:3.90.76.10 236 240 2.2E-7 T 10-03-2017 CpPa04_RS05940 42343dc16fb23d1b13f34253ec355573 546 Gene3D G3DSA:3.90.76.10 72 200 2.2E-7 T 10-03-2017 CpPa04_RS05940 42343dc16fb23d1b13f34253ec355573 546 SUPERFAMILY SSF53850 45 201 1.66E-33 T 10-03-2017 CpPa04_RS05940 42343dc16fb23d1b13f34253ec355573 546 SUPERFAMILY SSF53850 233 540 1.66E-33 T 10-03-2017 CpPa04_RS05940 42343dc16fb23d1b13f34253ec355573 546 Gene3D G3DSA:3.40.190.10 241 355 1.5E-11 T 10-03-2017 CpPa04_RS04915 7a8dc4a2d348b7b9125f745f142a3000 397 Gene3D G3DSA:3.40.50.10240 182 233 1.6E-4 T 10-03-2017 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 CpPa04_RS04915 7a8dc4a2d348b7b9125f745f142a3000 397 SUPERFAMILY SSF63999 157 303 1.83E-17 T 10-03-2017 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 CpPa04_RS04915 7a8dc4a2d348b7b9125f745f142a3000 397 Pfam PF12555 Thiamine pyrophosphokinase C terminal 336 389 1.1E-16 T 10-03-2017 IPR022215 Thiamine pyrophosphokinase C-terminal CpPa04_RS02640 1c871f4b1157ca9c349dfd1c06e7194b 847 Pfam PF07517 SecA DEAD-like domain 6 381 7.4E-128 T 10-03-2017 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CpPa04_RS02640 1c871f4b1157ca9c349dfd1c06e7194b 847 Gene3D G3DSA:1.10.3060.10 643 832 7.7E-59 T 10-03-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CpPa04_RS02640 1c871f4b1157ca9c349dfd1c06e7194b 847 SUPERFAMILY SSF81767 225 348 1.07E-43 T 10-03-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CpPa04_RS02640 1c871f4b1157ca9c349dfd1c06e7194b 847 SMART SM00957 4 382 1.6E-274 T 10-03-2017 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CpPa04_RS02640 1c871f4b1157ca9c349dfd1c06e7194b 847 SUPERFAMILY SSF52540 6 226 1.03E-80 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02640 1c871f4b1157ca9c349dfd1c06e7194b 847 SUPERFAMILY SSF52540 348 395 1.03E-80 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02640 1c871f4b1157ca9c349dfd1c06e7194b 847 Pfam PF07516 SecA Wing and Scaffold domain 612 831 1.2E-66 T 10-03-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CpPa04_RS02640 1c871f4b1157ca9c349dfd1c06e7194b 847 Gene3D G3DSA:3.90.1440.10 230 348 7.2E-47 T 10-03-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CpPa04_RS02640 1c871f4b1157ca9c349dfd1c06e7194b 847 Pfam PF01043 SecA preprotein cross-linking domain 231 338 8.7E-36 T 10-03-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CpPa04_RS02640 1c871f4b1157ca9c349dfd1c06e7194b 847 SMART SM00958 226 338 9.6E-61 T 10-03-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CpPa04_RS02640 1c871f4b1157ca9c349dfd1c06e7194b 847 Hamap MF_01382 Protein translocase subunit SecA [secA]. 3 835 19.43 T 10-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CpPa04_RS02640 1c871f4b1157ca9c349dfd1c06e7194b 847 Gene3D G3DSA:3.40.50.300 5 226 7.1E-123 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02640 1c871f4b1157ca9c349dfd1c06e7194b 847 Gene3D G3DSA:3.40.50.300 349 396 7.1E-123 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02640 1c871f4b1157ca9c349dfd1c06e7194b 847 SUPERFAMILY SSF52540 399 613 1.86E-59 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02640 1c871f4b1157ca9c349dfd1c06e7194b 847 Gene3D G3DSA:3.40.50.300 399 614 4.9E-92 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02640 1c871f4b1157ca9c349dfd1c06e7194b 847 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 27 819 0.0 T 10-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CpPa04_RS02640 1c871f4b1157ca9c349dfd1c06e7194b 847 PRINTS PR00906 SecA protein signature 61 85 2.7E-66 T 10-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CpPa04_RS02640 1c871f4b1157ca9c349dfd1c06e7194b 847 PRINTS PR00906 SecA protein signature 319 341 2.7E-66 T 10-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CpPa04_RS02640 1c871f4b1157ca9c349dfd1c06e7194b 847 PRINTS PR00906 SecA protein signature 356 373 2.7E-66 T 10-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CpPa04_RS02640 1c871f4b1157ca9c349dfd1c06e7194b 847 PRINTS PR00906 SecA protein signature 393 406 2.7E-66 T 10-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CpPa04_RS02640 1c871f4b1157ca9c349dfd1c06e7194b 847 PRINTS PR00906 SecA protein signature 115 125 2.7E-66 T 10-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CpPa04_RS02640 1c871f4b1157ca9c349dfd1c06e7194b 847 PRINTS PR00906 SecA protein signature 99 113 2.7E-66 T 10-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CpPa04_RS02640 1c871f4b1157ca9c349dfd1c06e7194b 847 PRINTS PR00906 SecA protein signature 168 188 2.7E-66 T 10-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CpPa04_RS02640 1c871f4b1157ca9c349dfd1c06e7194b 847 ProSitePatterns PS01312 SecA family signature. 480 495 - T 10-03-2017 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 CpPa04_RS02640 1c871f4b1157ca9c349dfd1c06e7194b 847 SUPERFAMILY SSF81886 616 832 3.01E-71 T 10-03-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CpPa04_RS06575 87f0bbe63eaba440ad3c731356a3fd6f 332 SUPERFAMILY SSF53474 52 326 2.56E-21 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS06575 87f0bbe63eaba440ad3c731356a3fd6f 332 Pfam PF12146 Serine aminopeptidase, S33 53 202 1.6E-16 T 10-03-2017 IPR022742 Serine aminopeptidase, S33 CpPa04_RS06575 87f0bbe63eaba440ad3c731356a3fd6f 332 Gene3D G3DSA:3.40.50.1820 52 183 5.3E-19 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS06575 87f0bbe63eaba440ad3c731356a3fd6f 332 Gene3D G3DSA:3.40.50.1820 253 326 5.3E-19 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS05650 a9840a868d76b6035cf6953777635a00 299 PIRSF PIRSF005052 15 299 2.6E-106 T 10-03-2017 IPR005337 RapZ-like family GO:0005524 CpPa04_RS05650 a9840a868d76b6035cf6953777635a00 299 Gene3D G3DSA:3.40.50.300 17 173 9.4E-16 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05650 a9840a868d76b6035cf6953777635a00 299 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 15 298 38.061 T 10-03-2017 IPR005337 RapZ-like family GO:0005524 CpPa04_RS05650 a9840a868d76b6035cf6953777635a00 299 SUPERFAMILY SSF52540 12 165 5.8E-11 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05650 a9840a868d76b6035cf6953777635a00 299 Pfam PF03668 P-loop ATPase protein family 18 298 1.1E-93 T 10-03-2017 IPR005337 RapZ-like family GO:0005524 CpPa04_RS05470 75eda2cd201fe112730bcad77757f1ac 376 Gene3D G3DSA:3.40.50.1400 25 179 4.0E-36 T 10-03-2017 CpPa04_RS05470 75eda2cd201fe112730bcad77757f1ac 376 SUPERFAMILY SSF53800 25 345 2.94E-70 T 10-03-2017 CpPa04_RS05470 75eda2cd201fe112730bcad77757f1ac 376 Gene3D G3DSA:3.40.50.1400 180 319 7.6E-40 T 10-03-2017 CpPa04_RS05470 75eda2cd201fe112730bcad77757f1ac 376 Hamap MF_00323 Ferrochelatase [hemH]. 23 340 26.289 T 10-03-2017 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CpPa04_RS05470 75eda2cd201fe112730bcad77757f1ac 376 Pfam PF00762 Ferrochelatase 25 339 4.2E-86 T 10-03-2017 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CpPa04_RS08145 c11d06946c2ab433edbd34c36d6303ff 871 Pfam PF01433 Peptidase family M1 20 407 2.4E-70 T 10-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CpPa04_RS08145 c11d06946c2ab433edbd34c36d6303ff 871 SUPERFAMILY SSF63737 7 202 8.76E-39 T 10-03-2017 CpPa04_RS08145 c11d06946c2ab433edbd34c36d6303ff 871 SUPERFAMILY SSF55486 227 472 1.9E-74 T 10-03-2017 CpPa04_RS08145 c11d06946c2ab433edbd34c36d6303ff 871 Pfam PF11838 ERAP1-like C-terminal domain 545 857 6.1E-48 T 10-03-2017 IPR024571 ERAP1-like C-terminal domain CpPa04_RS08145 c11d06946c2ab433edbd34c36d6303ff 871 TIGRFAM TIGR02412 pepN_strep_liv: aminopeptidase N 5 868 5.2E-273 T 10-03-2017 IPR012778 Peptidase M1, aminopeptidase GO:0004177|GO:0006508 KEGG: 00480+3.4.11.2|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112 CpPa04_RS08145 c11d06946c2ab433edbd34c36d6303ff 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 334 346 1.6E-16 T 10-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CpPa04_RS08145 c11d06946c2ab433edbd34c36d6303ff 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 139 154 1.6E-16 T 10-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CpPa04_RS08145 c11d06946c2ab433edbd34c36d6303ff 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 315 330 1.6E-16 T 10-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CpPa04_RS08145 c11d06946c2ab433edbd34c36d6303ff 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 281 291 1.6E-16 T 10-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CpPa04_RS08145 c11d06946c2ab433edbd34c36d6303ff 871 Gene3D G3DSA:1.10.390.10 328 473 2.2E-42 T 10-03-2017 CpPa04_RS03300 40c2a2c58217903b85ae187d3ddbc151 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 224 6.9E-13 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS03300 40c2a2c58217903b85ae187d3ddbc151 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 118 3.0E-14 T 10-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CpPa04_RS03300 40c2a2c58217903b85ae187d3ddbc151 228 Gene3D G3DSA:1.10.3720.10 10 224 5.3E-35 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS03300 40c2a2c58217903b85ae187d3ddbc151 228 SUPERFAMILY SSF161098 10 212 8.24E-34 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 Gene3D G3DSA:3.30.70.370 612 660 3.3E-65 T 10-03-2017 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 Gene3D G3DSA:3.30.70.370 768 875 3.3E-65 T 10-03-2017 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 SMART SM00279 170 205 8.0E-12 T 10-03-2017 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 SMART SM00482 634 841 2.2E-108 T 10-03-2017 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 ProSitePatterns PS00447 DNA polymerase family A signature. 703 722 - T 10-03-2017 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 SUPERFAMILY SSF56672 473 874 2.45E-139 T 10-03-2017 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 Gene3D G3DSA:3.40.50.1010 1 182 5.3E-65 T 10-03-2017 IPR029060 PIN domain-like CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 Gene3D G3DSA:1.10.150.20 183 242 4.3E-24 T 10-03-2017 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 Pfam PF00476 DNA polymerase family A 498 874 6.2E-142 T 10-03-2017 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 SUPERFAMILY SSF53098 304 467 2.28E-28 T 10-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 1 167 3.9E-53 T 10-03-2017 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 Gene3D G3DSA:3.30.420.10 303 489 1.4E-48 T 10-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 169 261 9.5E-26 T 10-03-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 Gene3D G3DSA:1.20.1060.10 492 611 1.3E-30 T 10-03-2017 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 679 692 9.5E-74 T 10-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 762 773 9.5E-74 T 10-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 824 837 9.5E-74 T 10-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 649 672 9.5E-74 T 10-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 794 810 9.5E-74 T 10-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 703 728 9.5E-74 T 10-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 626 641 9.5E-74 T 10-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 740 751 9.5E-74 T 10-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 603 625 9.5E-74 T 10-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 SUPERFAMILY SSF88723 1 167 2.55E-50 T 10-03-2017 IPR029060 PIN domain-like CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 Gene3D G3DSA:1.10.150.20 661 767 8.4E-30 T 10-03-2017 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 SMART SM00474 299 466 1.3E-12 T 10-03-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 SUPERFAMILY SSF47807 168 280 1.79E-28 T 10-03-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 TIGRFAM TIGR00593 pola: DNA polymerase I 1 874 1.4E-290 T 10-03-2017 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CpPa04_RS04725 3b81a3ec3e8f21afea6e5a77ba15c93d 878 SMART SM00475 1 258 7.6E-126 T 10-03-2017 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CpPa04_RS03455 8f37acde346b411af02df3997aac6883 280 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 19 277 1.7E-64 T 10-03-2017 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 CpPa04_RS03455 8f37acde346b411af02df3997aac6883 280 SUPERFAMILY SSF51556 18 278 1.83E-66 T 10-03-2017 IPR032466 Metal-dependent hydrolase CpPa04_RS03455 8f37acde346b411af02df3997aac6883 280 PIRSF PIRSF005902 16 280 1.2E-60 T 10-03-2017 IPR001130 TatD family GO:0016788 CpPa04_RS03455 8f37acde346b411af02df3997aac6883 280 Gene3D G3DSA:3.20.20.140 18 279 1.7E-72 T 10-03-2017 CpPa04_RS03455 8f37acde346b411af02df3997aac6883 280 Pfam PF01026 TatD related DNase 20 276 6.0E-60 T 10-03-2017 IPR001130 TatD family GO:0016788 CpPa04_RS07930 086be6a9454d5b319473082d3ba27c13 209 SMART SM00382 35 205 7.4E-13 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS07930 086be6a9454d5b319473082d3ba27c13 209 SUPERFAMILY SSF52540 6 208 3.55E-42 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07930 086be6a9454d5b319473082d3ba27c13 209 Pfam PF00005 ABC transporter 30 156 7.8E-22 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS07930 086be6a9454d5b319473082d3ba27c13 209 Gene3D G3DSA:3.40.50.300 7 208 1.5E-45 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07930 086be6a9454d5b319473082d3ba27c13 209 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS02580 70fe67df8576102397d110187cdcd5a4 459 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 257 4.4E-22 T 10-03-2017 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02580 70fe67df8576102397d110187cdcd5a4 459 SUPERFAMILY SSF53738 9 126 8.24E-35 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02580 70fe67df8576102397d110187cdcd5a4 459 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 264 371 3.9E-27 T 10-03-2017 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02580 70fe67df8576102397d110187cdcd5a4 459 SUPERFAMILY SSF53738 263 367 1.88E-29 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02580 70fe67df8576102397d110187cdcd5a4 459 Gene3D G3DSA:3.30.310.50 374 458 5.0E-20 T 10-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02580 70fe67df8576102397d110187cdcd5a4 459 SUPERFAMILY SSF53738 157 259 2.55E-28 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02580 70fe67df8576102397d110187cdcd5a4 459 Gene3D G3DSA:3.40.120.10 254 371 1.9E-37 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02580 70fe67df8576102397d110187cdcd5a4 459 Gene3D G3DSA:3.40.120.10 11 126 1.5E-31 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02580 70fe67df8576102397d110187cdcd5a4 459 Gene3D G3DSA:3.40.120.10 177 253 9.5E-30 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02580 70fe67df8576102397d110187cdcd5a4 459 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 456 2.0E-11 T 10-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02580 70fe67df8576102397d110187cdcd5a4 459 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 11 126 4.3E-32 T 10-03-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02580 70fe67df8576102397d110187cdcd5a4 459 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 4.0E-20 T 10-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02580 70fe67df8576102397d110187cdcd5a4 459 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 208 221 4.0E-20 T 10-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02580 70fe67df8576102397d110187cdcd5a4 459 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 237 252 4.0E-20 T 10-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02580 70fe67df8576102397d110187cdcd5a4 459 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 4.0E-20 T 10-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02580 70fe67df8576102397d110187cdcd5a4 459 SUPERFAMILY SSF55957 371 458 3.4E-18 T 10-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS02635 e2586f726b8d3568dfc18c3dbb0866c9 220 SUPERFAMILY SSF69754 16 119 8.5E-20 T 10-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CpPa04_RS02635 e2586f726b8d3568dfc18c3dbb0866c9 220 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 16 113 1.2E-19 T 10-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CpPa04_RS02635 e2586f726b8d3568dfc18c3dbb0866c9 220 Gene3D G3DSA:3.30.160.100 16 112 4.9E-24 T 10-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CpPa04_RS02635 e2586f726b8d3568dfc18c3dbb0866c9 220 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 160 213 1.1E-23 T 10-03-2017 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal CpPa04_RS02635 e2586f726b8d3568dfc18c3dbb0866c9 220 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 17 112 7.4E-18 T 10-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CpPa04_RS04580 1f033b18709d1dc8b9ae78bc3c851287 495 Gene3D G3DSA:3.40.50.620 7 71 9.5E-44 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS04580 1f033b18709d1dc8b9ae78bc3c851287 495 Gene3D G3DSA:3.40.50.620 196 250 9.5E-44 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS04580 1f033b18709d1dc8b9ae78bc3c851287 495 SUPERFAMILY SSF48163 320 487 3.4E-32 T 10-03-2017 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CpPa04_RS04580 1f033b18709d1dc8b9ae78bc3c851287 495 PRINTS PR00987 Glutamyl-tRNA synthetase signature 24 35 4.2E-21 T 10-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CpPa04_RS04580 1f033b18709d1dc8b9ae78bc3c851287 495 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 204 4.2E-21 T 10-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CpPa04_RS04580 1f033b18709d1dc8b9ae78bc3c851287 495 PRINTS PR00987 Glutamyl-tRNA synthetase signature 10 22 4.2E-21 T 10-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CpPa04_RS04580 1f033b18709d1dc8b9ae78bc3c851287 495 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 218 4.2E-21 T 10-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CpPa04_RS04580 1f033b18709d1dc8b9ae78bc3c851287 495 PRINTS PR00987 Glutamyl-tRNA synthetase signature 39 52 4.2E-21 T 10-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CpPa04_RS04580 1f033b18709d1dc8b9ae78bc3c851287 495 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 7 487 30.293 T 10-03-2017 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CpPa04_RS04580 1f033b18709d1dc8b9ae78bc3c851287 495 Gene3D G3DSA:1.10.10.350 391 485 6.9E-19 T 10-03-2017 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CpPa04_RS04580 1f033b18709d1dc8b9ae78bc3c851287 495 SUPERFAMILY SSF52374 7 319 6.97E-99 T 10-03-2017 CpPa04_RS04580 1f033b18709d1dc8b9ae78bc3c851287 495 Gene3D G3DSA:3.90.800.10 72 194 8.9E-35 T 10-03-2017 CpPa04_RS04580 1f033b18709d1dc8b9ae78bc3c851287 495 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 6 484 6.1E-126 T 10-03-2017 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CpPa04_RS04580 1f033b18709d1dc8b9ae78bc3c851287 495 Gene3D G3DSA:1.10.1160.10 253 335 3.4E-28 T 10-03-2017 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CpPa04_RS04580 1f033b18709d1dc8b9ae78bc3c851287 495 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 325 5.4E-78 T 10-03-2017 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 CpPa04_RS01165 ebf9cb0c8636e327ce35187ab2bfdc7b 508 Gene3D G3DSA:3.30.70.1230 325 497 7.4E-32 T 10-03-2017 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 CpPa04_RS01165 ebf9cb0c8636e327ce35187ab2bfdc7b 508 SMART SM00044 293 481 7.5E-7 T 10-03-2017 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 CpPa04_RS01165 ebf9cb0c8636e327ce35187ab2bfdc7b 508 SUPERFAMILY SSF55073 317 495 3.14E-43 T 10-03-2017 IPR029787 Nucleotide cyclase CpPa04_RS01165 ebf9cb0c8636e327ce35187ab2bfdc7b 508 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 326 494 4.3E-24 T 10-03-2017 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 CpPa04_RS01165 ebf9cb0c8636e327ce35187ab2bfdc7b 508 SMART SM00304 245 297 4.0E-9 T 10-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CpPa04_RS01165 ebf9cb0c8636e327ce35187ab2bfdc7b 508 SUPERFAMILY SSF158472 246 294 6.8E-7 T 10-03-2017 CpPa04_RS01165 ebf9cb0c8636e327ce35187ab2bfdc7b 508 Pfam PF00672 HAMP domain 226 293 5.4E-9 T 10-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CpPa04_RS00865 1802c83c8b98d622a45bf81d85b746ee 1111 SUPERFAMILY SSF117074 422 502 9.81E-17 T 10-03-2017 CpPa04_RS00865 1802c83c8b98d622a45bf81d85b746ee 1111 Pfam PF05738 Cna protein B-type domain 762 839 2.8E-11 T 10-03-2017 IPR008454 Collagen-binding surface protein Cna-like, B-type domain CpPa04_RS00865 1802c83c8b98d622a45bf81d85b746ee 1111 Pfam PF05738 Cna protein B-type domain 450 499 3.1E-8 T 10-03-2017 IPR008454 Collagen-binding surface protein Cna-like, B-type domain CpPa04_RS00865 1802c83c8b98d622a45bf81d85b746ee 1111 Pfam PF05738 Cna protein B-type domain 909 970 3.5E-9 T 10-03-2017 IPR008454 Collagen-binding surface protein Cna-like, B-type domain CpPa04_RS00865 1802c83c8b98d622a45bf81d85b746ee 1111 SUPERFAMILY SSF117074 854 961 8.76E-18 T 10-03-2017 CpPa04_RS00865 1802c83c8b98d622a45bf81d85b746ee 1111 SUPERFAMILY SSF117074 718 831 1.57E-18 T 10-03-2017 CpPa04_RS00865 1802c83c8b98d622a45bf81d85b746ee 1111 Gene3D G3DSA:2.60.40.10 875 951 8.0E-12 T 10-03-2017 IPR013783 Immunoglobulin-like fold CpPa04_RS00865 1802c83c8b98d622a45bf81d85b746ee 1111 Gene3D G3DSA:2.60.40.10 429 503 1.5E-17 T 10-03-2017 IPR013783 Immunoglobulin-like fold CpPa04_RS00865 1802c83c8b98d622a45bf81d85b746ee 1111 Gene3D G3DSA:2.60.40.10 743 828 6.3E-15 T 10-03-2017 IPR013783 Immunoglobulin-like fold CpPa04_RS04255 532569147082a2118efc0cba73d3cddb 714 Gene3D G3DSA:3.40.50.300 419 701 1.7E-97 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04255 532569147082a2118efc0cba73d3cddb 714 SUPERFAMILY SSF52540 406 655 9.06E-67 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04255 532569147082a2118efc0cba73d3cddb 714 Pfam PF07498 Rho termination factor, N-terminal domain 12 48 6.4E-10 T 10-03-2017 IPR011112 Rho termination factor, N-terminal GO:0006353 CpPa04_RS04255 532569147082a2118efc0cba73d3cddb 714 Gene3D G3DSA:2.40.50.140 322 414 3.2E-35 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS04255 532569147082a2118efc0cba73d3cddb 714 Gene3D G3DSA:2.40.50.140 10 51 3.2E-35 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS04255 532569147082a2118efc0cba73d3cddb 714 Pfam PF07497 Rho termination factor, RNA-binding domain 328 413 2.0E-27 T 10-03-2017 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 CpPa04_RS04255 532569147082a2118efc0cba73d3cddb 714 Hamap MF_01884 Transcription termination factor Rho [rho]. 328 704 188.348 T 10-03-2017 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CpPa04_RS04255 532569147082a2118efc0cba73d3cddb 714 TIGRFAM TIGR00767 rho: transcription termination factor Rho 11 701 1.1E-191 T 10-03-2017 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CpPa04_RS04255 532569147082a2118efc0cba73d3cddb 714 SMART SM00382 455 640 5.4E-10 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS04255 532569147082a2118efc0cba73d3cddb 714 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 444 648 4.6E-25 T 10-03-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CpPa04_RS04255 532569147082a2118efc0cba73d3cddb 714 SUPERFAMILY SSF68912 11 48 9.42E-5 T 10-03-2017 IPR011112 Rho termination factor, N-terminal GO:0006353 CpPa04_RS04255 532569147082a2118efc0cba73d3cddb 714 SUPERFAMILY SSF50249 328 413 4.28E-13 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS04255 532569147082a2118efc0cba73d3cddb 714 SMART SM00959 11 53 9.5E-11 T 10-03-2017 IPR011112 Rho termination factor, N-terminal GO:0006353 CpPa04_RS04790 9828051199f7c5ed084c6054caea2e54 64 Pfam PF01632 Ribosomal protein L35 2 61 9.0E-22 T 10-03-2017 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS04790 9828051199f7c5ed084c6054caea2e54 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 61 7.4E-21 T 10-03-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CpPa04_RS04790 9828051199f7c5ed084c6054caea2e54 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 14.529 T 10-03-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CpPa04_RS04790 9828051199f7c5ed084c6054caea2e54 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 1.3E-15 T 10-03-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CpPa04_RS04790 9828051199f7c5ed084c6054caea2e54 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 1.3E-15 T 10-03-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CpPa04_RS04790 9828051199f7c5ed084c6054caea2e54 64 PRINTS PR00064 Ribosomal protein L35 signature 2 19 1.3E-15 T 10-03-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CpPa04_RS04790 9828051199f7c5ed084c6054caea2e54 64 SUPERFAMILY SSF143034 1 62 9.16E-20 T 10-03-2017 CpPa04_RS05540 f2153b1f79820d01c8769a99b3290135 429 Gene3D G3DSA:3.40.640.10 46 296 6.2E-83 T 10-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CpPa04_RS05540 f2153b1f79820d01c8769a99b3290135 429 Gene3D G3DSA:3.90.1150.10 297 413 8.3E-29 T 10-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CpPa04_RS05540 f2153b1f79820d01c8769a99b3290135 429 Pfam PF00266 Aminotransferase class-V 35 408 6.9E-137 T 10-03-2017 IPR000192 Aminotransferase class V domain CpPa04_RS05540 f2153b1f79820d01c8769a99b3290135 429 SUPERFAMILY SSF53383 13 415 2.61E-118 T 10-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase CpPa04_RS05540 f2153b1f79820d01c8769a99b3290135 429 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 229 248 - T 10-03-2017 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CpPa04_RS05540 f2153b1f79820d01c8769a99b3290135 429 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 17 420 1.5E-169 T 10-03-2017 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CpPa04_RS07230 9a6d5cb6600562f443db625b4362a141 196 Pfam PF00510 Cytochrome c oxidase subunit III 16 194 2.5E-28 T 10-03-2017 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS07230 9a6d5cb6600562f443db625b4362a141 196 Gene3D G3DSA:1.20.120.80 14 195 1.4E-54 T 10-03-2017 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS07230 9a6d5cb6600562f443db625b4362a141 196 SUPERFAMILY SSF81452 11 194 1.83E-55 T 10-03-2017 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS06650 efad73fde588762b9a19780af2818b3f 243 Gene3D G3DSA:3.40.1160.10 7 242 2.6E-87 T 10-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase CpPa04_RS06650 efad73fde588762b9a19780af2818b3f 243 Pfam PF00696 Amino acid kinase family 13 221 4.1E-29 T 10-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase CpPa04_RS06650 efad73fde588762b9a19780af2818b3f 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 10 242 41.218 T 10-03-2017 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CpPa04_RS06650 efad73fde588762b9a19780af2818b3f 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 12 242 7.0E-87 T 10-03-2017 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CpPa04_RS06650 efad73fde588762b9a19780af2818b3f 243 PIRSF PIRSF005650 7 243 1.3E-85 T 10-03-2017 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 CpPa04_RS06650 efad73fde588762b9a19780af2818b3f 243 SUPERFAMILY SSF53633 11 241 1.96E-70 T 10-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase CpPa04_RS03615 60d8cc3c86c2f61d8d0e0ebbc0eb9868 205 SUPERFAMILY SSF101386 96 178 5.98E-15 T 10-03-2017 CpPa04_RS03615 60d8cc3c86c2f61d8d0e0ebbc0eb9868 205 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 104 178 9.2E-24 T 10-03-2017 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CpPa04_RS03615 60d8cc3c86c2f61d8d0e0ebbc0eb9868 205 Gene3D G3DSA:1.10.287.1080 98 151 1.8E-7 T 10-03-2017 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 SUPERFAMILY SSF54211 262 432 3.03E-59 T 10-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 PRINTS PR00418 DNA topoisomerase II family signature 114 128 6.3E-70 T 10-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 PRINTS PR00418 DNA topoisomerase II family signature 613 629 6.3E-70 T 10-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 PRINTS PR00418 DNA topoisomerase II family signature 545 562 6.3E-70 T 10-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 PRINTS PR00418 DNA topoisomerase II family signature 37 52 6.3E-70 T 10-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 PRINTS PR00418 DNA topoisomerase II family signature 309 322 6.3E-70 T 10-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 PRINTS PR00418 DNA topoisomerase II family signature 461 475 6.3E-70 T 10-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 PRINTS PR00418 DNA topoisomerase II family signature 72 85 6.3E-70 T 10-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 PRINTS PR00418 DNA topoisomerase II family signature 527 543 6.3E-70 T 10-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 PRINTS PR00418 DNA topoisomerase II family signature 565 577 6.3E-70 T 10-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 35 174 1.3E-24 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 ProSitePatterns PS00177 DNA topoisomerase II signature. 463 471 - T 10-03-2017 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 8 681 9.1E-291 T 10-03-2017 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 SMART SM00387 33 175 4.2E-26 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 Gene3D G3DSA:3.30.230.10 261 432 1.2E-73 T 10-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 5 681 90.971 T 10-03-2017 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 Pfam PF00204 DNA gyrase B 262 431 3.0E-62 T 10-03-2017 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 PRINTS PR01159 DNA gyrase subunit B signature 353 369 9.1E-66 T 10-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 PRINTS PR01159 DNA gyrase subunit B signature 195 208 9.1E-66 T 10-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 PRINTS PR01159 DNA gyrase subunit B signature 283 301 9.1E-66 T 10-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 PRINTS PR01159 DNA gyrase subunit B signature 401 415 9.1E-66 T 10-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 PRINTS PR01159 DNA gyrase subunit B signature 415 435 9.1E-66 T 10-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 PRINTS PR01159 DNA gyrase subunit B signature 634 646 9.1E-66 T 10-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 PRINTS PR01159 DNA gyrase subunit B signature 180 195 9.1E-66 T 10-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 PRINTS PR01159 DNA gyrase subunit B signature 8 18 9.1E-66 T 10-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 PRINTS PR01159 DNA gyrase subunit B signature 511 520 9.1E-66 T 10-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 PRINTS PR01159 DNA gyrase subunit B signature 650 666 9.1E-66 T 10-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 Gene3D G3DSA:3.40.50.670 445 662 8.5E-90 T 10-03-2017 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 612 669 1.7E-25 T 10-03-2017 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 SMART SM00433 37 674 0.0 T 10-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 SUPERFAMILY SSF55874 8 212 1.83E-68 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 Pfam PF01751 Toprim domain 460 571 5.3E-17 T 10-03-2017 IPR006171 Toprim domain CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 SUPERFAMILY SSF56719 435 676 1.46E-82 T 10-03-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CpPa04_RS00025 c7be608740328118630e6829e06d4f42 681 Gene3D G3DSA:3.30.565.10 8 213 5.1E-86 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS03505 13e06ca196187b9bc5acc770cf3b1fa2 356 Pfam PF16113 Enoyl-CoA hydratase/isomerase 23 351 3.3E-98 T 10-03-2017 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 CpPa04_RS03505 13e06ca196187b9bc5acc770cf3b1fa2 356 Gene3D G3DSA:3.90.226.10 11 211 4.6E-49 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS03505 13e06ca196187b9bc5acc770cf3b1fa2 356 SUPERFAMILY SSF52096 8 208 1.33E-53 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS03505 13e06ca196187b9bc5acc770cf3b1fa2 356 SUPERFAMILY SSF52096 266 338 1.33E-53 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS06175 6c60e034b2642419a7532809390ead04 508 Gene3D G3DSA:3.40.50.150 146 306 1.9E-22 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS06175 6c60e034b2642419a7532809390ead04 508 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 224 230 - T 10-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CpPa04_RS06175 6c60e034b2642419a7532809390ead04 508 SUPERFAMILY SSF53335 148 306 5.68E-22 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS06175 6c60e034b2642419a7532809390ead04 508 Pfam PF05175 Methyltransferase small domain 143 234 1.3E-12 T 10-03-2017 IPR007848 Methyltransferase small domain GO:0008168 CpPa04_RS08255 77b858051ead6f12361b10fd89820690 608 Pfam PF00082 Subtilase family 177 473 6.4E-48 T 10-03-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CpPa04_RS08255 77b858051ead6f12361b10fd89820690 608 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 182 192 - T 10-03-2017 IPR023827 Peptidase S8, subtilisin, Asp-active site CpPa04_RS08255 77b858051ead6f12361b10fd89820690 608 SUPERFAMILY SSF52743 165 212 7.33E-73 T 10-03-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CpPa04_RS08255 77b858051ead6f12361b10fd89820690 608 SUPERFAMILY SSF52743 239 494 7.33E-73 T 10-03-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CpPa04_RS08255 77b858051ead6f12361b10fd89820690 608 Gene3D G3DSA:3.40.50.200 146 495 8.0E-85 T 10-03-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CpPa04_RS08255 77b858051ead6f12361b10fd89820690 608 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 246 256 - T 10-03-2017 IPR022398 Peptidase S8, subtilisin, His-active site CpPa04_RS08255 77b858051ead6f12361b10fd89820690 608 PRINTS PR00723 Subtilisin serine protease family (S8) signature 428 444 1.4E-12 T 10-03-2017 IPR015500 Peptidase S8, subtilisin-related CpPa04_RS08255 77b858051ead6f12361b10fd89820690 608 PRINTS PR00723 Subtilisin serine protease family (S8) signature 177 196 1.4E-12 T 10-03-2017 IPR015500 Peptidase S8, subtilisin-related CpPa04_RS08255 77b858051ead6f12361b10fd89820690 608 PRINTS PR00723 Subtilisin serine protease family (S8) signature 242 255 1.4E-12 T 10-03-2017 IPR015500 Peptidase S8, subtilisin-related CpPa04_RS08255 77b858051ead6f12361b10fd89820690 608 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 429 439 - T 10-03-2017 IPR023828 Peptidase S8, subtilisin, Ser-active site CpPa04_RS07830 ccf51b5817f5b2ccba08751027d8e4dc 615 SUPERFAMILY SSF52540 360 595 2.23E-84 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07830 ccf51b5817f5b2ccba08751027d8e4dc 615 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS07830 ccf51b5817f5b2ccba08751027d8e4dc 615 SUPERFAMILY SSF90123 7 313 3.66E-52 T 10-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CpPa04_RS07830 ccf51b5817f5b2ccba08751027d8e4dc 615 Pfam PF00664 ABC transporter transmembrane region 21 297 2.9E-34 T 10-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CpPa04_RS07830 ccf51b5817f5b2ccba08751027d8e4dc 615 Pfam PF00005 ABC transporter 378 527 2.3E-33 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS07830 ccf51b5817f5b2ccba08751027d8e4dc 615 Gene3D G3DSA:1.20.1560.10 6 324 5.3E-52 T 10-03-2017 CpPa04_RS07830 ccf51b5817f5b2ccba08751027d8e4dc 615 SMART SM00382 387 573 3.0E-15 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS07830 ccf51b5817f5b2ccba08751027d8e4dc 615 Gene3D G3DSA:3.40.50.300 360 591 9.6E-77 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04070 5a7b53ab1f4ca4f77059c6560330f06b 271 SUPERFAMILY SSF51735 106 263 1.22E-27 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS04070 5a7b53ab1f4ca4f77059c6560330f06b 271 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 26 93 1.3E-15 T 10-03-2017 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CpPa04_RS04070 5a7b53ab1f4ca4f77059c6560330f06b 271 Gene3D G3DSA:3.40.192.10 25 110 1.9E-26 T 10-03-2017 CpPa04_RS04070 5a7b53ab1f4ca4f77059c6560330f06b 271 Gene3D G3DSA:3.40.50.720 111 263 9.7E-35 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS04070 5a7b53ab1f4ca4f77059c6560330f06b 271 SUPERFAMILY SSF53223 10 105 9.78E-25 T 10-03-2017 CpPa04_RS00045 9a3f5aee9313333cf272dd744d62c76c 854 Gene3D G3DSA:2.120.10.90 505 814 8.8E-121 T 10-03-2017 CpPa04_RS00045 9a3f5aee9313333cf272dd744d62c76c 854 Gene3D G3DSA:3.90.199.10 36 245 9.6E-109 T 10-03-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CpPa04_RS00045 9a3f5aee9313333cf272dd744d62c76c 854 Gene3D G3DSA:3.90.199.10 343 407 9.6E-109 T 10-03-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CpPa04_RS00045 9a3f5aee9313333cf272dd744d62c76c 854 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 770 813 4.9E-11 T 10-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CpPa04_RS00045 9a3f5aee9313333cf272dd744d62c76c 854 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 720 767 1.0E-11 T 10-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CpPa04_RS00045 9a3f5aee9313333cf272dd744d62c76c 854 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 515 560 5.4E-13 T 10-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CpPa04_RS00045 9a3f5aee9313333cf272dd744d62c76c 854 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 563 597 1.0E-9 T 10-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CpPa04_RS00045 9a3f5aee9313333cf272dd744d62c76c 854 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 667 715 1.8E-12 T 10-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CpPa04_RS00045 9a3f5aee9313333cf272dd744d62c76c 854 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 620 664 3.2E-9 T 10-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CpPa04_RS00045 9a3f5aee9313333cf272dd744d62c76c 854 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 14 815 0.0 T 10-03-2017 CpPa04_RS00045 9a3f5aee9313333cf272dd744d62c76c 854 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 9 818 23.303 T 10-03-2017 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CpPa04_RS00045 9a3f5aee9313333cf272dd744d62c76c 854 SUPERFAMILY SSF56719 10 498 2.35E-168 T 10-03-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CpPa04_RS00045 9a3f5aee9313333cf272dd744d62c76c 854 SUPERFAMILY SSF101904 508 826 4.19E-105 T 10-03-2017 CpPa04_RS00045 9a3f5aee9313333cf272dd744d62c76c 854 SMART SM00434 17 474 3.1E-265 T 10-03-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CpPa04_RS00045 9a3f5aee9313333cf272dd744d62c76c 854 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 38 481 3.0E-146 T 10-03-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CpPa04_RS00045 9a3f5aee9313333cf272dd744d62c76c 854 Gene3D G3DSA:3.30.1360.40 246 342 1.3E-33 T 10-03-2017 IPR024946 Arginine repressor C-terminal-like domain CpPa04_RS02945 d4b3c50f41f1e7e81f7492d7006e62c6 163 Gene3D G3DSA:2.40.280.10 13 132 2.7E-49 T 10-03-2017 IPR023620 Small protein B CpPa04_RS02945 d4b3c50f41f1e7e81f7492d7006e62c6 163 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 10-03-2017 IPR020081 SsrA-binding protein, conserved site CpPa04_RS02945 d4b3c50f41f1e7e81f7492d7006e62c6 163 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 67.6 T 10-03-2017 IPR000037 SsrA-binding protein GO:0003723 CpPa04_RS02945 d4b3c50f41f1e7e81f7492d7006e62c6 163 TIGRFAM TIGR00086 smpB: SsrA-binding protein 13 154 7.7E-56 T 10-03-2017 IPR000037 SsrA-binding protein GO:0003723 CpPa04_RS02945 d4b3c50f41f1e7e81f7492d7006e62c6 163 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 137 9.0E-61 T 10-03-2017 IPR000037 SsrA-binding protein GO:0003723 CpPa04_RS02945 d4b3c50f41f1e7e81f7492d7006e62c6 163 Pfam PF01668 SmpB protein 13 76 2.5E-29 T 10-03-2017 IPR000037 SsrA-binding protein GO:0003723 CpPa04_RS02945 d4b3c50f41f1e7e81f7492d7006e62c6 163 SUPERFAMILY SSF74982 9 137 9.02E-50 T 10-03-2017 IPR023620 Small protein B CpPa04_RS05670 8727adddba0cde6ba5a0e1a7ac0d573e 451 SUPERFAMILY SSF142695 247 418 4.32E-65 T 10-03-2017 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CpPa04_RS05670 8727adddba0cde6ba5a0e1a7ac0d573e 451 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 24 221 7.7E-69 T 10-03-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CpPa04_RS05670 8727adddba0cde6ba5a0e1a7ac0d573e 451 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 28 219 7.2E-81 T 10-03-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CpPa04_RS05670 8727adddba0cde6ba5a0e1a7ac0d573e 451 Gene3D G3DSA:3.90.870.10 21 227 1.8E-89 T 10-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain CpPa04_RS05670 8727adddba0cde6ba5a0e1a7ac0d573e 451 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 244 442 40.088 T 10-03-2017 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CpPa04_RS05670 8727adddba0cde6ba5a0e1a7ac0d573e 451 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 23 438 50.453 T 10-03-2017 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CpPa04_RS05670 8727adddba0cde6ba5a0e1a7ac0d573e 451 PIRSF PIRSF001259 23 447 2.6E-157 T 10-03-2017 CpPa04_RS05670 8727adddba0cde6ba5a0e1a7ac0d573e 451 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 22 225 36.97 T 10-03-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CpPa04_RS05670 8727adddba0cde6ba5a0e1a7ac0d573e 451 Pfam PF00925 GTP cyclohydrolase II 247 416 1.6E-68 T 10-03-2017 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CpPa04_RS05670 8727adddba0cde6ba5a0e1a7ac0d573e 451 SUPERFAMILY SSF55821 25 225 2.01E-78 T 10-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain CpPa04_RS05670 8727adddba0cde6ba5a0e1a7ac0d573e 451 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 247 439 2.4E-68 T 10-03-2017 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CpPa04_RS04105 9f93e6c6e29183160177d4976be27c81 102 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 52 79 0.0036 T 10-03-2017 IPR019931 LPXTG cell wall anchor domain CpPa04_RS05210 4ddc79f563e8d294404af97a3df20267 501 SUPERFAMILY SSF53790 256 484 4.84E-47 T 10-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS05210 4ddc79f563e8d294404af97a3df20267 501 Gene3D G3DSA:3.30.950.10 370 483 5.8E-8 T 10-03-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS05210 4ddc79f563e8d294404af97a3df20267 501 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 259 501 4.8E-82 T 10-03-2017 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 CpPa04_RS05210 4ddc79f563e8d294404af97a3df20267 501 SUPERFAMILY SSF53790 4 241 2.75E-44 T 10-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS05210 4ddc79f563e8d294404af97a3df20267 501 Gene3D G3DSA:3.40.1010.10 4 135 7.1E-33 T 10-03-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS05210 4ddc79f563e8d294404af97a3df20267 501 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 259 464 5.9E-31 T 10-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS05210 4ddc79f563e8d294404af97a3df20267 501 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 219 1.1E-47 T 10-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS05210 4ddc79f563e8d294404af97a3df20267 501 Gene3D G3DSA:3.40.1010.10 257 369 6.9E-27 T 10-03-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS05210 4ddc79f563e8d294404af97a3df20267 501 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 102 134 - T 10-03-2017 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CpPa04_RS05210 4ddc79f563e8d294404af97a3df20267 501 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 5 236 2.2E-62 T 10-03-2017 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 CpPa04_RS00005 37a953265ddb88d674787534ce428584 603 SMART SM00382 290 418 7.1E-9 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS00005 37a953265ddb88d674787534ce428584 603 SUPERFAMILY SSF52540 258 467 5.63E-42 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00005 37a953265ddb88d674787534ce428584 603 Gene3D G3DSA:3.40.50.300 255 421 4.4E-59 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00005 37a953265ddb88d674787534ce428584 603 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 510 576 1.5E-26 T 10-03-2017 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CpPa04_RS00005 37a953265ddb88d674787534ce428584 603 Gene3D G3DSA:1.10.1750.10 498 599 4.5E-36 T 10-03-2017 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CpPa04_RS00005 37a953265ddb88d674787534ce428584 603 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 9 598 30.364 T 10-03-2017 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CpPa04_RS00005 37a953265ddb88d674787534ce428584 603 Gene3D G3DSA:1.10.8.60 424 497 1.0E-21 T 10-03-2017 CpPa04_RS00005 37a953265ddb88d674787534ce428584 603 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 35 597 4.7E-143 T 10-03-2017 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CpPa04_RS00005 37a953265ddb88d674787534ce428584 603 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 355 369 2.6E-50 T 10-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like CpPa04_RS00005 37a953265ddb88d674787534ce428584 603 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 557 576 2.6E-50 T 10-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like CpPa04_RS00005 37a953265ddb88d674787534ce428584 603 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 323 337 2.6E-50 T 10-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like CpPa04_RS00005 37a953265ddb88d674787534ce428584 603 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 291 311 2.6E-50 T 10-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like CpPa04_RS00005 37a953265ddb88d674787534ce428584 603 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 389 416 2.6E-50 T 10-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like CpPa04_RS00005 37a953265ddb88d674787534ce428584 603 ProSitePatterns PS01008 DnaA protein signature. 557 576 - T 10-03-2017 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CpPa04_RS00005 37a953265ddb88d674787534ce428584 603 Pfam PF00308 Bacterial dnaA protein 258 474 3.5E-91 T 10-03-2017 IPR013317 Chromosomal replication initiator protein DnaA CpPa04_RS00005 37a953265ddb88d674787534ce428584 603 SMART SM00760 507 576 9.2E-33 T 10-03-2017 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CpPa04_RS00005 37a953265ddb88d674787534ce428584 603 SUPERFAMILY SSF48295 494 599 7.06E-32 T 10-03-2017 IPR010921 Trp repressor/replication initiator GO:0043565 CpPa04_RS01380 dc0119480a61ff6adf36dbb2785d080c 347 Pfam PF12710 haloacid dehalogenase-like hydrolase 102 288 7.5E-29 T 10-03-2017 CpPa04_RS01380 dc0119480a61ff6adf36dbb2785d080c 347 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 101 291 8.7E-16 T 10-03-2017 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 CpPa04_RS01380 dc0119480a61ff6adf36dbb2785d080c 347 SUPERFAMILY SSF56784 101 323 7.59E-29 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS01380 dc0119480a61ff6adf36dbb2785d080c 347 Gene3D G3DSA:3.40.50.1000 174 321 6.5E-45 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS01380 dc0119480a61ff6adf36dbb2785d080c 347 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 101 301 4.4E-62 T 10-03-2017 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial CpPa04_RS02720 4c3c25794ea0cfb5d186cea6328c3fde 441 Gene3D G3DSA:3.40.50.300 229 376 3.8E-47 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02720 4c3c25794ea0cfb5d186cea6328c3fde 441 SMART SM00487 27 232 2.7E-53 T 10-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CpPa04_RS02720 4c3c25794ea0cfb5d186cea6328c3fde 441 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 161 169 - T 10-03-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CpPa04_RS02720 4c3c25794ea0cfb5d186cea6328c3fde 441 Pfam PF00271 Helicase conserved C-terminal domain 243 349 5.3E-28 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS02720 4c3c25794ea0cfb5d186cea6328c3fde 441 SUPERFAMILY SSF52540 83 368 1.11E-72 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02720 4c3c25794ea0cfb5d186cea6328c3fde 441 Gene3D G3DSA:3.40.50.300 3 228 1.5E-74 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02720 4c3c25794ea0cfb5d186cea6328c3fde 441 SMART SM00490 268 349 3.2E-30 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS02720 4c3c25794ea0cfb5d186cea6328c3fde 441 Pfam PF00270 DEAD/DEAH box helicase 33 200 7.6E-48 T 10-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CpPa04_RS05310 1e276282b6abe531ed8be375ed1480c7 476 Gene3D G3DSA:1.10.40.30 413 464 1.5E-17 T 10-03-2017 CpPa04_RS05310 1e276282b6abe531ed8be375ed1480c7 476 Pfam PF00206 Lyase 15 347 3.6E-98 T 10-03-2017 IPR022761 Fumarate lyase, N-terminal CpPa04_RS05310 1e276282b6abe531ed8be375ed1480c7 476 ProSitePatterns PS00163 Fumarate lyases signature. 322 331 - T 10-03-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 CpPa04_RS05310 1e276282b6abe531ed8be375ed1480c7 476 Pfam PF10415 Fumarase C C-terminus 413 465 1.9E-16 T 10-03-2017 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CpPa04_RS05310 1e276282b6abe531ed8be375ed1480c7 476 PRINTS PR00145 Argininosuccinate lyase family signature 139 161 8.0E-5 T 10-03-2017 CpPa04_RS05310 1e276282b6abe531ed8be375ed1480c7 476 PRINTS PR00145 Argininosuccinate lyase family signature 322 338 8.0E-5 T 10-03-2017 CpPa04_RS05310 1e276282b6abe531ed8be375ed1480c7 476 PRINTS PR00145 Argininosuccinate lyase family signature 180 200 8.0E-5 T 10-03-2017 CpPa04_RS05310 1e276282b6abe531ed8be375ed1480c7 476 PRINTS PR00149 Fumarate lyase superfamily signature 140 158 9.7E-26 T 10-03-2017 IPR000362 Fumarate lyase family CpPa04_RS05310 1e276282b6abe531ed8be375ed1480c7 476 PRINTS PR00149 Fumarate lyase superfamily signature 322 338 9.7E-26 T 10-03-2017 IPR000362 Fumarate lyase family CpPa04_RS05310 1e276282b6abe531ed8be375ed1480c7 476 PRINTS PR00149 Fumarate lyase superfamily signature 185 203 9.7E-26 T 10-03-2017 IPR000362 Fumarate lyase family CpPa04_RS05310 1e276282b6abe531ed8be375ed1480c7 476 PRINTS PR00149 Fumarate lyase superfamily signature 276 303 9.7E-26 T 10-03-2017 IPR000362 Fumarate lyase family CpPa04_RS05310 1e276282b6abe531ed8be375ed1480c7 476 SUPERFAMILY SSF48557 5 461 3.61E-133 T 10-03-2017 IPR008948 L-Aspartase-like GO:0003824 CpPa04_RS05310 1e276282b6abe531ed8be375ed1480c7 476 Gene3D G3DSA:1.20.200.10 145 408 4.0E-84 T 10-03-2017 CpPa04_RS05310 1e276282b6abe531ed8be375ed1480c7 476 Gene3D G3DSA:1.10.275.10 6 144 7.4E-54 T 10-03-2017 IPR024083 Fumarase/histidase, N-terminal CpPa04_RS05310 1e276282b6abe531ed8be375ed1480c7 476 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 8 475 6.6E-220 T 10-03-2017 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 CpPa04_RS08390 ad5618f7a38beec114e8db93e76ca020 244 SUPERFAMILY SSF55666 158 241 3.8E-24 T 10-03-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CpPa04_RS08390 ad5618f7a38beec114e8db93e76ca020 244 SUPERFAMILY SSF54211 7 187 1.87E-45 T 10-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CpPa04_RS08390 ad5618f7a38beec114e8db93e76ca020 244 Hamap MF_00564 Ribonuclease PH [rph]. 7 242 43.779 T 10-03-2017 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 CpPa04_RS08390 ad5618f7a38beec114e8db93e76ca020 244 ProSitePatterns PS01277 Ribonuclease PH signature. 122 134 - T 10-03-2017 IPR018336 Ribonuclease PH, conserved site CpPa04_RS08390 ad5618f7a38beec114e8db93e76ca020 244 Pfam PF03725 3' exoribonuclease family, domain 2 163 229 2.4E-11 T 10-03-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CpPa04_RS08390 ad5618f7a38beec114e8db93e76ca020 244 Pfam PF01138 3' exoribonuclease family, domain 1 16 146 1.8E-25 T 10-03-2017 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CpPa04_RS08390 ad5618f7a38beec114e8db93e76ca020 244 Gene3D G3DSA:3.30.230.70 8 241 2.3E-33 T 10-03-2017 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CpPa04_RS08390 ad5618f7a38beec114e8db93e76ca020 244 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 8 241 1.6E-112 T 10-03-2017 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 CpPa04_RS02660 7af6be57359bf5de5dc256b0206680eb 352 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 146 165 3.4E-5 T 10-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CpPa04_RS02660 7af6be57359bf5de5dc256b0206680eb 352 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 85 92 3.4E-5 T 10-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CpPa04_RS02660 7af6be57359bf5de5dc256b0206680eb 352 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 185 196 3.4E-5 T 10-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CpPa04_RS02660 7af6be57359bf5de5dc256b0206680eb 352 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 66 76 3.4E-5 T 10-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CpPa04_RS02660 7af6be57359bf5de5dc256b0206680eb 352 SUPERFAMILY SSF54292 256 350 3.67E-16 T 10-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CpPa04_RS02660 7af6be57359bf5de5dc256b0206680eb 352 PRINTS PR00410 Phenol hydroxylase reductase family signature 146 165 1.6E-9 T 10-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 CpPa04_RS02660 7af6be57359bf5de5dc256b0206680eb 352 PRINTS PR00410 Phenol hydroxylase reductase family signature 130 139 1.6E-9 T 10-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 CpPa04_RS02660 7af6be57359bf5de5dc256b0206680eb 352 PRINTS PR00410 Phenol hydroxylase reductase family signature 232 240 1.6E-9 T 10-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 CpPa04_RS02660 7af6be57359bf5de5dc256b0206680eb 352 PRINTS PR00410 Phenol hydroxylase reductase family signature 66 78 1.6E-9 T 10-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 CpPa04_RS02660 7af6be57359bf5de5dc256b0206680eb 352 SUPERFAMILY SSF52343 125 255 5.37E-25 T 10-03-2017 CpPa04_RS02660 7af6be57359bf5de5dc256b0206680eb 352 SUPERFAMILY SSF63380 46 135 1.56E-20 T 10-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CpPa04_RS02660 7af6be57359bf5de5dc256b0206680eb 352 Gene3D G3DSA:3.10.20.30 257 350 2.3E-16 T 10-03-2017 IPR012675 Beta-grasp domain CpPa04_RS02660 7af6be57359bf5de5dc256b0206680eb 352 Gene3D G3DSA:3.40.50.80 129 254 1.7E-27 T 10-03-2017 CpPa04_RS02660 7af6be57359bf5de5dc256b0206680eb 352 Pfam PF00175 Oxidoreductase NAD-binding domain 147 245 6.7E-14 T 10-03-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CpPa04_RS02660 7af6be57359bf5de5dc256b0206680eb 352 Gene3D G3DSA:2.40.30.10 44 128 2.7E-23 T 10-03-2017 CpPa04_RS02660 7af6be57359bf5de5dc256b0206680eb 352 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 284 344 1.9E-8 T 10-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CpPa04_RS02660 7af6be57359bf5de5dc256b0206680eb 352 Pfam PF00970 Oxidoreductase FAD-binding domain 64 136 8.8E-12 T 10-03-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CpPa04_RS10665 5bf881f1c0a469ee575096d917ef5af9 107 ProSitePatterns PS00194 Thioredoxin family active site. 24 42 - T 10-03-2017 IPR017937 Thioredoxin, conserved site GO:0045454 CpPa04_RS10665 5bf881f1c0a469ee575096d917ef5af9 107 PRINTS PR00421 Thioredoxin family signature 23 31 2.3E-8 T 10-03-2017 CpPa04_RS10665 5bf881f1c0a469ee575096d917ef5af9 107 PRINTS PR00421 Thioredoxin family signature 71 82 2.3E-8 T 10-03-2017 CpPa04_RS10665 5bf881f1c0a469ee575096d917ef5af9 107 PRINTS PR00421 Thioredoxin family signature 31 40 2.3E-8 T 10-03-2017 CpPa04_RS10665 5bf881f1c0a469ee575096d917ef5af9 107 TIGRFAM TIGR01068 thioredoxin: thioredoxin 8 105 5.5E-37 T 10-03-2017 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CpPa04_RS10665 5bf881f1c0a469ee575096d917ef5af9 107 Gene3D G3DSA:3.40.30.10 5 106 2.2E-36 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS10665 5bf881f1c0a469ee575096d917ef5af9 107 PIRSF PIRSF000077 1 107 9.0E-38 T 10-03-2017 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CpPa04_RS10665 5bf881f1c0a469ee575096d917ef5af9 107 SUPERFAMILY SSF52833 4 106 7.65E-38 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS10665 5bf881f1c0a469ee575096d917ef5af9 107 Pfam PF00085 Thioredoxin 5 105 2.8E-32 T 10-03-2017 IPR013766 Thioredoxin domain GO:0045454 CpPa04_RS03340 717fe43e4948508fd046840ebd50af50 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 20.436 T 10-03-2017 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS03340 717fe43e4948508fd046840ebd50af50 78 SUPERFAMILY SSF143800 2 77 1.51E-26 T 10-03-2017 CpPa04_RS03340 717fe43e4948508fd046840ebd50af50 78 Gene3D G3DSA:2.30.170.40 2 77 4.6E-32 T 10-03-2017 CpPa04_RS03340 717fe43e4948508fd046840ebd50af50 78 Pfam PF00830 Ribosomal L28 family 4 61 9.6E-24 T 10-03-2017 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS03340 717fe43e4948508fd046840ebd50af50 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 1.5E-25 T 10-03-2017 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS10555 ddfd667e8748625800b1b2d193ed474b 397 Gene3D G3DSA:1.10.600.10 94 386 1.9E-41 T 10-03-2017 IPR008949 Isoprenoid synthase domain CpPa04_RS10555 ddfd667e8748625800b1b2d193ed474b 397 SUPERFAMILY SSF48576 100 385 4.03E-46 T 10-03-2017 IPR008949 Isoprenoid synthase domain CpPa04_RS10555 ddfd667e8748625800b1b2d193ed474b 397 Pfam PF00494 Squalene/phytoene synthase 108 299 6.6E-28 T 10-03-2017 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 CpPa04_RS06590 413655fd76d3ded155444ec11d7c736e 481 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 5 473 1.0E-127 T 10-03-2017 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 CpPa04_RS06590 413655fd76d3ded155444ec11d7c736e 481 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 481 160.257 T 10-03-2017 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 CpPa04_RS06590 413655fd76d3ded155444ec11d7c736e 481 SUPERFAMILY SSF52317 270 398 7.03E-35 T 10-03-2017 IPR029062 Class I glutamine amidotransferase-like CpPa04_RS06590 413655fd76d3ded155444ec11d7c736e 481 SUPERFAMILY SSF52317 191 237 7.03E-35 T 10-03-2017 IPR029062 Class I glutamine amidotransferase-like CpPa04_RS06590 413655fd76d3ded155444ec11d7c736e 481 SUPERFAMILY SSF52540 1 241 2.04E-49 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06590 413655fd76d3ded155444ec11d7c736e 481 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 258 423 2.1E-37 T 10-03-2017 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 CpPa04_RS06590 413655fd76d3ded155444ec11d7c736e 481 Gene3D G3DSA:3.40.50.880 257 393 4.3E-28 T 10-03-2017 IPR029062 Class I glutamine amidotransferase-like CpPa04_RS06590 413655fd76d3ded155444ec11d7c736e 481 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 225 3.0E-28 T 10-03-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CpPa04_RS06590 413655fd76d3ded155444ec11d7c736e 481 Gene3D G3DSA:3.40.50.300 1 237 4.0E-42 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09125 61395a26315ec83da97937361b356071 187 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 3 186 41.291 T 10-03-2017 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 CpPa04_RS09125 61395a26315ec83da97937361b356071 187 SUPERFAMILY SSF55620 3 186 7.41E-75 T 10-03-2017 CpPa04_RS09125 61395a26315ec83da97937361b356071 187 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 63 79 - T 10-03-2017 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 CpPa04_RS09125 61395a26315ec83da97937361b356071 187 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 113 123 - T 10-03-2017 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 CpPa04_RS09125 61395a26315ec83da97937361b356071 187 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 9 186 7.1E-73 T 10-03-2017 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 CpPa04_RS09125 61395a26315ec83da97937361b356071 187 Pfam PF01227 GTP cyclohydrolase I 8 185 2.1E-76 T 10-03-2017 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 CpPa04_RS09125 61395a26315ec83da97937361b356071 187 Gene3D G3DSA:1.10.286.10 3 54 6.9E-25 T 10-03-2017 CpPa04_RS09125 61395a26315ec83da97937361b356071 187 Gene3D G3DSA:3.30.1130.10 56 186 1.7E-57 T 10-03-2017 CpPa04_RS02840 2c2020f39a8c0dde147cb1b34fee1be7 882 SUPERFAMILY SSF49503 605 738 2.72E-32 T 10-03-2017 IPR008972 Cupredoxin CpPa04_RS02840 2c2020f39a8c0dde147cb1b34fee1be7 882 Gene3D G3DSA:2.60.40.420 719 869 2.3E-39 T 10-03-2017 IPR008972 Cupredoxin CpPa04_RS02840 2c2020f39a8c0dde147cb1b34fee1be7 882 Gene3D G3DSA:2.60.40.420 468 556 8.7E-10 T 10-03-2017 IPR008972 Cupredoxin CpPa04_RS02840 2c2020f39a8c0dde147cb1b34fee1be7 882 SUPERFAMILY SSF49503 475 554 6.47E-11 T 10-03-2017 IPR008972 Cupredoxin CpPa04_RS02840 2c2020f39a8c0dde147cb1b34fee1be7 882 Pfam PF07732 Multicopper oxidase 624 723 8.5E-12 T 10-03-2017 IPR011707 Multicopper oxidase, type 3 GO:0005507 CpPa04_RS02840 2c2020f39a8c0dde147cb1b34fee1be7 882 SUPERFAMILY SSF49503 723 881 9.9E-38 T 10-03-2017 IPR008972 Cupredoxin CpPa04_RS02840 2c2020f39a8c0dde147cb1b34fee1be7 882 PRINTS PR00695 Copper containing nitrite reductase signature 705 721 2.9E-8 T 10-03-2017 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 CpPa04_RS02840 2c2020f39a8c0dde147cb1b34fee1be7 882 PRINTS PR00695 Copper containing nitrite reductase signature 688 703 2.9E-8 T 10-03-2017 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 CpPa04_RS02840 2c2020f39a8c0dde147cb1b34fee1be7 882 PRINTS PR00695 Copper containing nitrite reductase signature 631 647 2.9E-8 T 10-03-2017 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 CpPa04_RS02840 2c2020f39a8c0dde147cb1b34fee1be7 882 Pfam PF13473 Cupredoxin-like domain 471 530 6.8E-7 T 10-03-2017 IPR028096 EfeO-type cupredoxin-like domain CpPa04_RS02840 2c2020f39a8c0dde147cb1b34fee1be7 882 Gene3D G3DSA:2.60.40.420 591 718 6.7E-29 T 10-03-2017 IPR008972 Cupredoxin CpPa04_RS00430 43160dd8b3a54e2c1a881be3c363a0ba 220 Pfam PF03352 Methyladenine glycosylase 34 201 3.3E-61 T 10-03-2017 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 CpPa04_RS00430 43160dd8b3a54e2c1a881be3c363a0ba 220 Gene3D G3DSA:1.10.340.30 30 201 1.2E-65 T 10-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CpPa04_RS00430 43160dd8b3a54e2c1a881be3c363a0ba 220 SUPERFAMILY SSF48150 30 202 1.1E-59 T 10-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CpPa04_RS10445 6d96d0a27138fb33000dd0b0a0055d2b 1135 TIGRFAM TIGR03769 P_ac_wall_RPT: actinobacterial surface-anchored protein domain 990 1020 3.1E-10 T 10-03-2017 IPR022435 Surface-anchored repeat, actinobacteria CpPa04_RS10445 6d96d0a27138fb33000dd0b0a0055d2b 1135 TIGRFAM TIGR03769 P_ac_wall_RPT: actinobacterial surface-anchored protein domain 741 778 1.7E-10 T 10-03-2017 IPR022435 Surface-anchored repeat, actinobacteria CpPa04_RS10445 6d96d0a27138fb33000dd0b0a0055d2b 1135 TIGRFAM TIGR03769 P_ac_wall_RPT: actinobacterial surface-anchored protein domain 187 228 3.4E-14 T 10-03-2017 IPR022435 Surface-anchored repeat, actinobacteria CpPa04_RS03490 1e6a2d19aab8f4e992e58d96bfd0d4a0 287 SUPERFAMILY SSF52540 48 236 1.71E-28 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03490 1e6a2d19aab8f4e992e58d96bfd0d4a0 287 PIRSF PIRSF028756 1 273 5.4E-125 T 10-03-2017 IPR016898 Polyphosphate kinase 2 CpPa04_RS03490 1e6a2d19aab8f4e992e58d96bfd0d4a0 287 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 16 243 3.7E-114 T 10-03-2017 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 CpPa04_RS03490 1e6a2d19aab8f4e992e58d96bfd0d4a0 287 Gene3D G3DSA:3.40.50.300 3 252 1.5E-105 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03490 1e6a2d19aab8f4e992e58d96bfd0d4a0 287 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 16 243 1.5E-106 T 10-03-2017 IPR022488 Polyphosphate kinase-2-related CpPa04_RS08730 026c9a3ed85e50e8cc195266e118c48d 368 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 53 367 2.2E-76 T 10-03-2017 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 CpPa04_RS08730 026c9a3ed85e50e8cc195266e118c48d 368 Pfam PF12849 PBP superfamily domain 43 338 1.6E-59 T 10-03-2017 IPR024370 PBP domain CpPa04_RS08730 026c9a3ed85e50e8cc195266e118c48d 368 PIRSF PIRSF002756 5 368 4.4E-105 T 10-03-2017 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 CpPa04_RS08730 026c9a3ed85e50e8cc195266e118c48d 368 SUPERFAMILY SSF53850 51 368 6.52E-82 T 10-03-2017 CpPa04_RS08730 026c9a3ed85e50e8cc195266e118c48d 368 Gene3D G3DSA:3.40.190.10 49 204 2.5E-43 T 10-03-2017 CpPa04_RS08730 026c9a3ed85e50e8cc195266e118c48d 368 Gene3D G3DSA:3.40.190.10 229 366 9.6E-16 T 10-03-2017 CpPa04_RS00805 96da9ac19ffe7a4aba6a190673f57114 250 SUPERFAMILY SSF52317 17 207 2.88E-21 T 10-03-2017 IPR029062 Class I glutamine amidotransferase-like CpPa04_RS00805 96da9ac19ffe7a4aba6a190673f57114 250 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 6 214 1.8E-38 T 10-03-2017 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 CpPa04_RS00805 96da9ac19ffe7a4aba6a190673f57114 250 Gene3D G3DSA:3.40.50.880 29 224 1.3E-21 T 10-03-2017 IPR029062 Class I glutamine amidotransferase-like CpPa04_RS04660 1305b5481f28933245b1022c72470411 239 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 26 238 33.834 T 10-03-2017 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CpPa04_RS04660 1305b5481f28933245b1022c72470411 239 Pfam PF03167 Uracil DNA glycosylase superfamily 70 230 2.9E-20 T 10-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CpPa04_RS04660 1305b5481f28933245b1022c72470411 239 SUPERFAMILY SSF52141 24 239 8.97E-73 T 10-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CpPa04_RS04660 1305b5481f28933245b1022c72470411 239 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 76 85 - T 10-03-2017 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CpPa04_RS04660 1305b5481f28933245b1022c72470411 239 SMART SM00987 68 227 2.1E-33 T 10-03-2017 CpPa04_RS04660 1305b5481f28933245b1022c72470411 239 SMART SM00986 68 227 2.1E-33 T 10-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CpPa04_RS04660 1305b5481f28933245b1022c72470411 239 Gene3D G3DSA:3.40.470.10 20 239 5.3E-80 T 10-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CpPa04_RS01050 ee44a4679270dc15b5d3c7d7afd2d8e3 277 Pfam PF00753 Metallo-beta-lactamase superfamily 37 205 1.2E-12 T 10-03-2017 IPR001279 Metallo-beta-lactamase CpPa04_RS01050 ee44a4679270dc15b5d3c7d7afd2d8e3 277 SUPERFAMILY SSF56281 15 275 2.49E-44 T 10-03-2017 IPR001279 Metallo-beta-lactamase CpPa04_RS01050 ee44a4679270dc15b5d3c7d7afd2d8e3 277 Gene3D G3DSA:3.60.15.10 32 236 3.2E-36 T 10-03-2017 IPR001279 Metallo-beta-lactamase CpPa04_RS01050 ee44a4679270dc15b5d3c7d7afd2d8e3 277 SMART SM00849 37 205 1.5E-18 T 10-03-2017 IPR001279 Metallo-beta-lactamase CpPa04_RS04650 a2c49d11c758eb69e1a90fa76aa915f6 322 Pfam PF12028 Protein of unknown function (DUF3515) 170 319 4.4E-31 T 10-03-2017 IPR021903 Protein of unknown function DUF3515 CpPa04_RS04650 a2c49d11c758eb69e1a90fa76aa915f6 322 Pfam PF12028 Protein of unknown function (DUF3515) 17 174 5.7E-51 T 10-03-2017 IPR021903 Protein of unknown function DUF3515 CpPa04_RS04750 8b59450a8dade9112ae8dba143082521 412 Gene3D G3DSA:3.20.20.70 35 262 4.3E-60 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS04750 8b59450a8dade9112ae8dba143082521 412 Gene3D G3DSA:3.20.20.70 294 386 4.3E-60 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS04750 8b59450a8dade9112ae8dba143082521 412 TIGRFAM TIGR04053 sam_11: radical SAM protein, BA_1875 family 33 399 3.7E-159 T 10-03-2017 IPR027634 Radical SAM protein, BA_1875 family CpPa04_RS04750 8b59450a8dade9112ae8dba143082521 412 Pfam PF04055 Radical SAM superfamily 44 189 2.2E-9 T 10-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CpPa04_RS04750 8b59450a8dade9112ae8dba143082521 412 Pfam PF13186 Iron-sulfur cluster-binding domain 313 368 4.1E-6 T 10-03-2017 IPR023885 4Fe4S-binding SPASM domain CpPa04_RS04750 8b59450a8dade9112ae8dba143082521 412 SUPERFAMILY SSF102114 265 376 6.08E-54 T 10-03-2017 CpPa04_RS04750 8b59450a8dade9112ae8dba143082521 412 SUPERFAMILY SSF102114 34 235 6.08E-54 T 10-03-2017 CpPa04_RS04750 8b59450a8dade9112ae8dba143082521 412 PIRSF PIRSF037420 25 409 6.7E-86 T 10-03-2017 IPR017200 Coenzyme PQQ synthesis protein E CpPa04_RS04750 8b59450a8dade9112ae8dba143082521 412 Pfam PF13353 4Fe-4S single cluster domain 43 116 5.1E-6 T 10-03-2017 CpPa04_RS08100 42d8dfbb55911d214a6f051bf2d9b9a7 199 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 4 193 39.993 T 10-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CpPa04_RS08100 42d8dfbb55911d214a6f051bf2d9b9a7 199 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 6.9E-48 T 10-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CpPa04_RS08100 42d8dfbb55911d214a6f051bf2d9b9a7 199 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 6.9E-48 T 10-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CpPa04_RS08100 42d8dfbb55911d214a6f051bf2d9b9a7 199 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 6.9E-48 T 10-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CpPa04_RS08100 42d8dfbb55911d214a6f051bf2d9b9a7 199 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 6.9E-48 T 10-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CpPa04_RS08100 42d8dfbb55911d214a6f051bf2d9b9a7 199 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 6.9E-48 T 10-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CpPa04_RS08100 42d8dfbb55911d214a6f051bf2d9b9a7 199 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 10-03-2017 IPR033135 ClpP, histidine active site CpPa04_RS08100 42d8dfbb55911d214a6f051bf2d9b9a7 199 Gene3D G3DSA:3.90.226.10 19 192 8.3E-77 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS08100 42d8dfbb55911d214a6f051bf2d9b9a7 199 SUPERFAMILY SSF52096 19 191 5.31E-66 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS08100 42d8dfbb55911d214a6f051bf2d9b9a7 199 Pfam PF00574 Clp protease 18 191 5.0E-78 T 10-03-2017 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CpPa04_RS06525 91274ca07cc8730659c361a86dac1c08 245 Pfam PF03883 Protein of unknown function (DUF328) 1 213 8.9E-40 T 10-03-2017 IPR005583 Peroxide stress protein YaaA CpPa04_RS03920 e39318b8e18983d4db9797f134b19682 105 PRINTS PR00354 7Fe ferredoxin signature 9 19 3.2E-17 T 10-03-2017 IPR000813 7Fe ferredoxin GO:0009055 CpPa04_RS03920 e39318b8e18983d4db9797f134b19682 105 PRINTS PR00354 7Fe ferredoxin signature 19 29 3.2E-17 T 10-03-2017 IPR000813 7Fe ferredoxin GO:0009055 CpPa04_RS03920 e39318b8e18983d4db9797f134b19682 105 PRINTS PR00354 7Fe ferredoxin signature 35 52 3.2E-17 T 10-03-2017 IPR000813 7Fe ferredoxin GO:0009055 CpPa04_RS03920 e39318b8e18983d4db9797f134b19682 105 Pfam PF00037 4Fe-4S binding domain 34 55 1.4E-8 T 10-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CpPa04_RS03920 e39318b8e18983d4db9797f134b19682 105 SUPERFAMILY SSF54862 3 77 2.43E-20 T 10-03-2017 CpPa04_RS03920 e39318b8e18983d4db9797f134b19682 105 Gene3D G3DSA:3.30.70.20 5 68 6.7E-18 T 10-03-2017 CpPa04_RS03920 e39318b8e18983d4db9797f134b19682 105 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 10-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CpPa04_RS05300 062ba0ff9a5e2ec48f926b0bfb139501 95 Gene3D G3DSA:1.10.260.40 13 89 3.0E-20 T 10-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CpPa04_RS05300 062ba0ff9a5e2ec48f926b0bfb139501 95 SUPERFAMILY SSF47413 17 89 3.52E-14 T 10-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CpPa04_RS05300 062ba0ff9a5e2ec48f926b0bfb139501 95 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 14 89 1.0E-16 T 10-03-2017 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 CpPa04_RS09875 5ab1d4bf6dfce48f2523d48858bbaf71 611 Pfam PF00821 Phosphoenolpyruvate carboxykinase 22 607 3.5E-271 T 10-03-2017 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 CpPa04_RS09875 5ab1d4bf6dfce48f2523d48858bbaf71 611 SUPERFAMILY SSF68923 5 245 8.89E-97 T 10-03-2017 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CpPa04_RS09875 5ab1d4bf6dfce48f2523d48858bbaf71 611 Gene3D G3DSA:3.90.228.20 246 315 2.2E-32 T 10-03-2017 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CpPa04_RS09875 5ab1d4bf6dfce48f2523d48858bbaf71 611 Gene3D G3DSA:3.90.228.20 338 608 9.4E-90 T 10-03-2017 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CpPa04_RS09875 5ab1d4bf6dfce48f2523d48858bbaf71 611 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 11 608 49.696 T 10-03-2017 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 CpPa04_RS09875 5ab1d4bf6dfce48f2523d48858bbaf71 611 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 270 278 - T 10-03-2017 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 CpPa04_RS09875 5ab1d4bf6dfce48f2523d48858bbaf71 611 PIRSF PIRSF001348 1 611 1.5E-284 T 10-03-2017 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 CpPa04_RS09875 5ab1d4bf6dfce48f2523d48858bbaf71 611 SUPERFAMILY SSF53795 246 607 1.1E-149 T 10-03-2017 CpPa04_RS09875 5ab1d4bf6dfce48f2523d48858bbaf71 611 Gene3D G3DSA:3.40.449.10 6 245 3.1E-94 T 10-03-2017 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CpPa04_RS01395 f447528e04f6dc3cb9a56818b5b832df 296 Gene3D G3DSA:3.40.190.10 2 102 1.2E-27 T 10-03-2017 CpPa04_RS01395 f447528e04f6dc3cb9a56818b5b832df 296 Gene3D G3DSA:3.30.160.40 217 295 3.3E-23 T 10-03-2017 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CpPa04_RS01395 f447528e04f6dc3cb9a56818b5b832df 296 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 289 3.0E-93 T 10-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CpPa04_RS01395 f447528e04f6dc3cb9a56818b5b832df 296 PRINTS PR00151 Porphobilinogen deaminase signature 69 88 1.7E-21 T 10-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CpPa04_RS01395 f447528e04f6dc3cb9a56818b5b832df 296 PRINTS PR00151 Porphobilinogen deaminase signature 116 133 1.7E-21 T 10-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CpPa04_RS01395 f447528e04f6dc3cb9a56818b5b832df 296 PRINTS PR00151 Porphobilinogen deaminase signature 135 152 1.7E-21 T 10-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CpPa04_RS01395 f447528e04f6dc3cb9a56818b5b832df 296 PRINTS PR00151 Porphobilinogen deaminase signature 222 239 1.7E-21 T 10-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CpPa04_RS01395 f447528e04f6dc3cb9a56818b5b832df 296 SUPERFAMILY SSF53850 2 209 2.17E-63 T 10-03-2017 CpPa04_RS01395 f447528e04f6dc3cb9a56818b5b832df 296 PIRSF PIRSF001438 1 296 1.3E-101 T 10-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CpPa04_RS01395 f447528e04f6dc3cb9a56818b5b832df 296 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 223 239 - T 10-03-2017 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CpPa04_RS01395 f447528e04f6dc3cb9a56818b5b832df 296 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 203 2.4E-61 T 10-03-2017 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CpPa04_RS01395 f447528e04f6dc3cb9a56818b5b832df 296 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 2 289 32.831 T 10-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CpPa04_RS01395 f447528e04f6dc3cb9a56818b5b832df 296 Gene3D G3DSA:3.40.190.10 103 191 5.0E-35 T 10-03-2017 CpPa04_RS01395 f447528e04f6dc3cb9a56818b5b832df 296 SUPERFAMILY SSF54782 215 295 7.85E-21 T 10-03-2017 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CpPa04_RS01395 f447528e04f6dc3cb9a56818b5b832df 296 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 218 287 7.6E-18 T 10-03-2017 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CpPa04_RS08995 1ffb316ecaf09a23e238b52b0aad5099 459 PRINTS PR01874 DNA repair protein radA signature 84 112 4.0E-71 T 10-03-2017 CpPa04_RS08995 1ffb316ecaf09a23e238b52b0aad5099 459 PRINTS PR01874 DNA repair protein radA signature 11 35 4.0E-71 T 10-03-2017 CpPa04_RS08995 1ffb316ecaf09a23e238b52b0aad5099 459 PRINTS PR01874 DNA repair protein radA signature 329 352 4.0E-71 T 10-03-2017 CpPa04_RS08995 1ffb316ecaf09a23e238b52b0aad5099 459 PRINTS PR01874 DNA repair protein radA signature 181 205 4.0E-71 T 10-03-2017 CpPa04_RS08995 1ffb316ecaf09a23e238b52b0aad5099 459 PRINTS PR01874 DNA repair protein radA signature 220 248 4.0E-71 T 10-03-2017 CpPa04_RS08995 1ffb316ecaf09a23e238b52b0aad5099 459 PRINTS PR01874 DNA repair protein radA signature 255 281 4.0E-71 T 10-03-2017 CpPa04_RS08995 1ffb316ecaf09a23e238b52b0aad5099 459 SUPERFAMILY SSF52540 73 297 2.06E-43 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08995 1ffb316ecaf09a23e238b52b0aad5099 459 Hamap MF_01498 DNA repair protein RadA [radA]. 22 459 40.713 T 10-03-2017 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CpPa04_RS08995 1ffb316ecaf09a23e238b52b0aad5099 459 SMART SM00382 92 251 5.4E-10 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS08995 1ffb316ecaf09a23e238b52b0aad5099 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 376 435 8.8E-8 T 10-03-2017 CpPa04_RS08995 1ffb316ecaf09a23e238b52b0aad5099 459 Gene3D G3DSA:3.30.230.10 291 459 2.6E-31 T 10-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CpPa04_RS08995 1ffb316ecaf09a23e238b52b0aad5099 459 Gene3D G3DSA:3.40.50.300 69 284 3.8E-40 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08995 1ffb316ecaf09a23e238b52b0aad5099 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 455 1.5E-152 T 10-03-2017 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CpPa04_RS08995 1ffb316ecaf09a23e238b52b0aad5099 459 SUPERFAMILY SSF54211 301 458 2.77E-34 T 10-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CpPa04_RS08995 1ffb316ecaf09a23e238b52b0aad5099 459 Pfam PF13481 AAA domain 81 229 2.6E-15 T 10-03-2017 CpPa04_RS01720 d29d3f14748452dd1a40b61c1d53df14 155 PIRSF PIRSF002122 2 155 2.0E-57 T 10-03-2017 IPR000235 Ribosomal protein S5/S7 GO:0006412 CpPa04_RS01720 d29d3f14748452dd1a40b61c1d53df14 155 Gene3D G3DSA:1.10.455.10 6 155 1.1E-62 T 10-03-2017 IPR023798 Ribosomal protein S7 domain CpPa04_RS01720 d29d3f14748452dd1a40b61c1d53df14 155 ProSitePatterns PS00052 Ribosomal protein S7 signature. 19 45 - T 10-03-2017 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01720 d29d3f14748452dd1a40b61c1d53df14 155 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 155 33.696 T 10-03-2017 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CpPa04_RS01720 d29d3f14748452dd1a40b61c1d53df14 155 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 2 155 1.4E-65 T 10-03-2017 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CpPa04_RS01720 d29d3f14748452dd1a40b61c1d53df14 155 SUPERFAMILY SSF47973 5 148 7.85E-59 T 10-03-2017 IPR023798 Ribosomal protein S7 domain CpPa04_RS01720 d29d3f14748452dd1a40b61c1d53df14 155 Pfam PF00177 Ribosomal protein S7p/S5e 2 148 6.5E-61 T 10-03-2017 IPR023798 Ribosomal protein S7 domain CpPa04_RS05385 e48eefcb4e135f42ab4887e9fe3dbaa8 229 Gene3D G3DSA:3.40.50.510 3 126 1.4E-43 T 10-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CpPa04_RS05385 e48eefcb4e135f42ab4887e9fe3dbaa8 229 SUPERFAMILY SSF53062 5 125 1.12E-31 T 10-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CpPa04_RS05385 e48eefcb4e135f42ab4887e9fe3dbaa8 229 Gene3D G3DSA:3.30.1340.10 152 228 7.9E-14 T 10-03-2017 IPR000032 Phosphocarrier protein HPr-like CpPa04_RS05385 e48eefcb4e135f42ab4887e9fe3dbaa8 229 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 161 168 - T 10-03-2017 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CpPa04_RS05385 e48eefcb4e135f42ab4887e9fe3dbaa8 229 Pfam PF03610 PTS system fructose IIA component 7 118 1.0E-23 T 10-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CpPa04_RS05385 e48eefcb4e135f42ab4887e9fe3dbaa8 229 SUPERFAMILY SSF55594 152 228 2.09E-12 T 10-03-2017 IPR000032 Phosphocarrier protein HPr-like CpPa04_RS05385 e48eefcb4e135f42ab4887e9fe3dbaa8 229 PRINTS PR00107 Phosphocarrier protein signature 161 177 1.8E-5 T 10-03-2017 IPR000032 Phosphocarrier protein HPr-like CpPa04_RS05385 e48eefcb4e135f42ab4887e9fe3dbaa8 229 PRINTS PR00107 Phosphocarrier protein signature 197 214 1.8E-5 T 10-03-2017 IPR000032 Phosphocarrier protein HPr-like CpPa04_RS05385 e48eefcb4e135f42ab4887e9fe3dbaa8 229 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 152 224 1.9E-14 T 10-03-2017 IPR000032 Phosphocarrier protein HPr-like CpPa04_RS05385 e48eefcb4e135f42ab4887e9fe3dbaa8 229 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 6 124 1.3E-36 T 10-03-2017 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain CpPa04_RS05385 e48eefcb4e135f42ab4887e9fe3dbaa8 229 Pfam PF00381 PTS HPr component phosphorylation site 152 224 5.1E-16 T 10-03-2017 IPR000032 Phosphocarrier protein HPr-like CpPa04_RS00695 cf7d10d869dd70206fd1287efa388836 151 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 92 - T 10-03-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CpPa04_RS00695 cf7d10d869dd70206fd1287efa388836 151 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 9 151 43.127 T 10-03-2017 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CpPa04_RS00695 cf7d10d869dd70206fd1287efa388836 151 Gene3D G3DSA:3.40.140.10 5 148 7.2E-50 T 10-03-2017 CpPa04_RS00695 cf7d10d869dd70206fd1287efa388836 151 SUPERFAMILY SSF53927 5 149 3.35E-45 T 10-03-2017 IPR016193 Cytidine deaminase-like GO:0003824 CpPa04_RS00695 cf7d10d869dd70206fd1287efa388836 151 Pfam PF14437 MafB19-like deaminase 4 151 1.0E-24 T 10-03-2017 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CpPa04_RS04055 de93d688bfc16540bdc61b077c739c80 1228 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 1080 1226 1.3E-45 T 10-03-2017 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CpPa04_RS04055 de93d688bfc16540bdc61b077c739c80 1228 SUPERFAMILY SSF52518 408 815 1.13E-86 T 10-03-2017 IPR029061 Thiamin diphosphate-binding fold CpPa04_RS04055 de93d688bfc16540bdc61b077c739c80 1228 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 371 1225 1.1E-297 T 10-03-2017 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CpPa04_RS04055 de93d688bfc16540bdc61b077c739c80 1228 SUPERFAMILY SSF52777 106 340 1.25E-51 T 10-03-2017 CpPa04_RS04055 de93d688bfc16540bdc61b077c739c80 1228 Gene3D G3DSA:3.30.559.10 103 337 9.2E-49 T 10-03-2017 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 CpPa04_RS04055 de93d688bfc16540bdc61b077c739c80 1228 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 6 34 6.1E-9 T 10-03-2017 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CpPa04_RS04055 de93d688bfc16540bdc61b077c739c80 1228 Pfam PF00676 Dehydrogenase E1 component 493 816 2.1E-62 T 10-03-2017 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 CpPa04_RS04055 de93d688bfc16540bdc61b077c739c80 1228 PIRSF PIRSF000157 1 1228 0.0 T 10-03-2017 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CpPa04_RS04055 de93d688bfc16540bdc61b077c739c80 1228 Gene3D G3DSA:3.40.50.970 449 819 1.7E-77 T 10-03-2017 IPR029061 Thiamin diphosphate-binding fold CpPa04_RS04055 de93d688bfc16540bdc61b077c739c80 1228 Pfam PF02779 Transketolase, pyrimidine binding domain 879 1075 2.4E-50 T 10-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain CpPa04_RS04055 de93d688bfc16540bdc61b077c739c80 1228 SUPERFAMILY SSF52518 871 1082 5.79E-40 T 10-03-2017 IPR029061 Thiamin diphosphate-binding fold CpPa04_RS04055 de93d688bfc16540bdc61b077c739c80 1228 SMART SM00861 879 1075 4.4E-42 T 10-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain CpPa04_RS04055 de93d688bfc16540bdc61b077c739c80 1228 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 107 337 2.7E-51 T 10-03-2017 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CpPa04_RS04055 de93d688bfc16540bdc61b077c739c80 1228 Gene3D G3DSA:3.40.50.970 887 1086 5.5E-16 T 10-03-2017 IPR029061 Thiamin diphosphate-binding fold CpPa04_RS05865 437d4674238879672c3659592fb1d03e 673 Pfam PF12698 ABC-2 family transporter protein 23 157 8.1E-9 T 10-03-2017 CpPa04_RS05865 437d4674238879672c3659592fb1d03e 673 Pfam PF12698 ABC-2 family transporter protein 431 653 2.1E-12 T 10-03-2017 CpPa04_RS05865 437d4674238879672c3659592fb1d03e 673 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 9 171 2.8E-55 T 10-03-2017 IPR017500 Phage infection protein, YhgE, N-terminal CpPa04_RS05865 437d4674238879672c3659592fb1d03e 673 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 360 382 9.0E-5 T 10-03-2017 IPR023908 xxxLxxG heptad repeat CpPa04_RS05865 437d4674238879672c3659592fb1d03e 673 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 231 256 3.6E-4 T 10-03-2017 IPR023908 xxxLxxG heptad repeat CpPa04_RS05865 437d4674238879672c3659592fb1d03e 673 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 377 403 4.5E-6 T 10-03-2017 IPR023908 xxxLxxG heptad repeat CpPa04_RS05865 437d4674238879672c3659592fb1d03e 673 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 383 408 5.4E-5 T 10-03-2017 IPR023908 xxxLxxG heptad repeat CpPa04_RS05865 437d4674238879672c3659592fb1d03e 673 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 188 215 3.6E-7 T 10-03-2017 IPR023908 xxxLxxG heptad repeat CpPa04_RS05865 437d4674238879672c3659592fb1d03e 673 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 452 660 1.6E-61 T 10-03-2017 IPR017501 Phage infection protein, YhgE, C-terminal CpPa04_RS01210 1c4b90ab97f15f811cad5e215be665e5 457 Gene3D G3DSA:1.10.390.10 320 453 1.3E-19 T 10-03-2017 CpPa04_RS01210 1c4b90ab97f15f811cad5e215be665e5 457 Pfam PF01433 Peptidase family M1 29 363 4.5E-41 T 10-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CpPa04_RS01210 1c4b90ab97f15f811cad5e215be665e5 457 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 304 319 7.2E-14 T 10-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CpPa04_RS01210 1c4b90ab97f15f811cad5e215be665e5 457 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 150 165 7.2E-14 T 10-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CpPa04_RS01210 1c4b90ab97f15f811cad5e215be665e5 457 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 323 335 7.2E-14 T 10-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CpPa04_RS01210 1c4b90ab97f15f811cad5e215be665e5 457 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 197 212 7.2E-14 T 10-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CpPa04_RS01210 1c4b90ab97f15f811cad5e215be665e5 457 SUPERFAMILY SSF63737 14 213 1.57E-30 T 10-03-2017 CpPa04_RS01210 1c4b90ab97f15f811cad5e215be665e5 457 SUPERFAMILY SSF55486 228 453 9.82E-51 T 10-03-2017 CpPa04_RS07560 c9d2f2b47e2e686a0480338072c589a9 370 Gene3D G3DSA:3.40.1390.30 230 316 2.2E-32 T 10-03-2017 CpPa04_RS07560 c9d2f2b47e2e686a0480338072c589a9 370 Gene3D G3DSA:3.40.1390.30 105 120 2.2E-32 T 10-03-2017 CpPa04_RS07560 c9d2f2b47e2e686a0480338072c589a9 370 PIRSF PIRSF037489 1 362 1.6E-138 T 10-03-2017 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria CpPa04_RS07560 c9d2f2b47e2e686a0480338072c589a9 370 SUPERFAMILY SSF102705 1 360 2.75E-104 T 10-03-2017 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CpPa04_RS07560 c9d2f2b47e2e686a0480338072c589a9 370 Gene3D G3DSA:3.40.1390.30 1 104 6.7E-42 T 10-03-2017 CpPa04_RS07560 c9d2f2b47e2e686a0480338072c589a9 370 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 1 345 7.3E-70 T 10-03-2017 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CpPa04_RS07560 c9d2f2b47e2e686a0480338072c589a9 370 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 356 1.1E-47 T 10-03-2017 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CpPa04_RS07560 c9d2f2b47e2e686a0480338072c589a9 370 Gene3D G3DSA:3.30.70.830 122 225 2.5E-36 T 10-03-2017 CpPa04_RS06615 7af88ed1d93e7ed9aff1989cf2653f38 388 SUPERFAMILY SSF69055 290 383 1.7E-25 T 10-03-2017 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CpPa04_RS06615 7af88ed1d93e7ed9aff1989cf2653f38 388 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 131 1.4E-37 T 10-03-2017 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CpPa04_RS06615 7af88ed1d93e7ed9aff1989cf2653f38 388 Gene3D G3DSA:3.40.50.720 2 147 7.7E-46 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS06615 7af88ed1d93e7ed9aff1989cf2653f38 388 SUPERFAMILY SSF51735 3 147 1.58E-30 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS06615 7af88ed1d93e7ed9aff1989cf2653f38 388 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 381 42.652 T 10-03-2017 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CpPa04_RS06615 7af88ed1d93e7ed9aff1989cf2653f38 388 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 143 226 2.7E-34 T 10-03-2017 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CpPa04_RS06615 7af88ed1d93e7ed9aff1989cf2653f38 388 Gene3D G3DSA:1.10.1740.10 300 382 5.9E-29 T 10-03-2017 CpPa04_RS06615 7af88ed1d93e7ed9aff1989cf2653f38 388 SUPERFAMILY SSF55347 125 261 1.31E-51 T 10-03-2017 CpPa04_RS06615 7af88ed1d93e7ed9aff1989cf2653f38 388 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3 378 2.6E-112 T 10-03-2017 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CpPa04_RS06615 7af88ed1d93e7ed9aff1989cf2653f38 388 Pfam PF13288 DXP reductoisomerase C-terminal domain 259 376 1.2E-33 T 10-03-2017 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CpPa04_RS06615 7af88ed1d93e7ed9aff1989cf2653f38 388 PIRSF PIRSF006205 2 388 8.3E-138 T 10-03-2017 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CpPa04_RS00380 d7969671930cd15aff1b443f9ec7d0e5 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 1.8E-5 T 10-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CpPa04_RS00380 d7969671930cd15aff1b443f9ec7d0e5 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 1.8E-5 T 10-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CpPa04_RS00380 d7969671930cd15aff1b443f9ec7d0e5 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 1.8E-5 T 10-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CpPa04_RS00380 d7969671930cd15aff1b443f9ec7d0e5 138 Gene3D G3DSA:1.10.10.10 3 136 4.4E-36 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS00380 d7969671930cd15aff1b443f9ec7d0e5 138 SMART SM00347 28 124 1.2E-18 T 10-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CpPa04_RS00380 d7969671930cd15aff1b443f9ec7d0e5 138 Pfam PF01047 MarR family 35 91 1.2E-14 T 10-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CpPa04_RS00380 d7969671930cd15aff1b443f9ec7d0e5 138 SUPERFAMILY SSF46785 6 136 2.77E-32 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS09915 96b6a5308558e064c351da1fa4574038 517 Gene3D G3DSA:3.90.226.10 3 247 4.5E-59 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS09915 96b6a5308558e064c351da1fa4574038 517 SUPERFAMILY SSF52096 259 517 2.41E-77 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS09915 96b6a5308558e064c351da1fa4574038 517 Pfam PF01039 Carboxyl transferase domain 34 513 8.2E-143 T 10-03-2017 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CpPa04_RS09915 96b6a5308558e064c351da1fa4574038 517 Gene3D G3DSA:3.90.226.10 261 516 5.3E-80 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS09915 96b6a5308558e064c351da1fa4574038 517 SUPERFAMILY SSF52096 6 249 1.99E-62 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS06440 d90e509f3080db6921851f9b3cbca91a 248 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 111 242 2.5E-27 T 10-03-2017 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CpPa04_RS06440 d90e509f3080db6921851f9b3cbca91a 248 PIRSF PIRSF000161 1 248 8.8E-58 T 10-03-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CpPa04_RS06440 d90e509f3080db6921851f9b3cbca91a 248 Gene3D G3DSA:3.40.50.720 2 123 1.4E-42 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS06440 d90e509f3080db6921851f9b3cbca91a 248 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 3 107 4.1E-27 T 10-03-2017 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CpPa04_RS06440 d90e509f3080db6921851f9b3cbca91a 248 Gene3D G3DSA:3.30.360.10 124 215 1.1E-30 T 10-03-2017 CpPa04_RS06440 d90e509f3080db6921851f9b3cbca91a 248 SUPERFAMILY SSF55347 108 218 1.37E-37 T 10-03-2017 CpPa04_RS06440 d90e509f3080db6921851f9b3cbca91a 248 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 42 247 8.5E-55 T 10-03-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CpPa04_RS06440 d90e509f3080db6921851f9b3cbca91a 248 SUPERFAMILY SSF51735 3 132 4.1E-34 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS06440 d90e509f3080db6921851f9b3cbca91a 248 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 3 247 28.423 T 10-03-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CpPa04_RS06440 d90e509f3080db6921851f9b3cbca91a 248 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 129 146 - T 10-03-2017 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CpPa04_RS07550 0fc4a508ca95c63fde75d28422ae95d1 385 Gene3D G3DSA:3.30.420.10 3 132 1.3E-20 T 10-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CpPa04_RS07550 0fc4a508ca95c63fde75d28422ae95d1 385 SMART SM00855 185 340 1.1E-15 T 10-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 CpPa04_RS07550 0fc4a508ca95c63fde75d28422ae95d1 385 SUPERFAMILY SSF53098 2 127 8.35E-31 T 10-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CpPa04_RS07550 0fc4a508ca95c63fde75d28422ae95d1 385 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 187 379 8.2E-55 T 10-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 CpPa04_RS07550 0fc4a508ca95c63fde75d28422ae95d1 385 Pfam PF13456 Reverse transcriptase-like 8 129 1.9E-23 T 10-03-2017 CpPa04_RS07550 0fc4a508ca95c63fde75d28422ae95d1 385 Gene3D G3DSA:3.40.50.1240 183 384 2.2E-51 T 10-03-2017 IPR029033 Histidine phosphatase superfamily CpPa04_RS07550 0fc4a508ca95c63fde75d28422ae95d1 385 PIRSF PIRSF036922 1 385 3.9E-183 T 10-03-2017 IPR014636 RNase H, phosphoglycerate mutase domain-containing CpPa04_RS07550 0fc4a508ca95c63fde75d28422ae95d1 385 SUPERFAMILY SSF53254 184 384 4.98E-50 T 10-03-2017 IPR029033 Histidine phosphatase superfamily CpPa04_RS03830 2f577fcb44aac12cbfa1d7e07b1c7771 294 SUPERFAMILY SSF48179 175 291 6.46E-21 T 10-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CpPa04_RS03830 2f577fcb44aac12cbfa1d7e07b1c7771 294 SUPERFAMILY SSF51735 1 172 5.42E-15 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS03830 2f577fcb44aac12cbfa1d7e07b1c7771 294 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 174 291 1.6E-18 T 10-03-2017 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 CpPa04_RS03830 2f577fcb44aac12cbfa1d7e07b1c7771 294 Gene3D G3DSA:1.10.1040.10 174 292 3.7E-29 T 10-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CpPa04_RS03830 2f577fcb44aac12cbfa1d7e07b1c7771 294 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 3 291 3.0E-57 T 10-03-2017 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 CpPa04_RS03830 2f577fcb44aac12cbfa1d7e07b1c7771 294 Gene3D G3DSA:3.40.50.720 1 170 1.8E-38 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS03830 2f577fcb44aac12cbfa1d7e07b1c7771 294 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 147 4.3E-25 T 10-03-2017 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 CpPa04_RS02280 8ef404602dcd65747dc0d095577bd07e 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 5 154 30.018 T 10-03-2017 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CpPa04_RS02280 8ef404602dcd65747dc0d095577bd07e 157 Pfam PF00588 SpoU rRNA Methylase family 6 145 4.1E-31 T 10-03-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CpPa04_RS02280 8ef404602dcd65747dc0d095577bd07e 157 PIRSF PIRSF029256 4 157 1.2E-54 T 10-03-2017 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CpPa04_RS02280 8ef404602dcd65747dc0d095577bd07e 157 Gene3D G3DSA:3.40.1280.10 6 156 1.3E-58 T 10-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CpPa04_RS02280 8ef404602dcd65747dc0d095577bd07e 157 SUPERFAMILY SSF75217 6 154 1.05E-40 T 10-03-2017 IPR029028 Alpha/beta knot methyltransferases CpPa04_RS02445 368ebf514a145159c21e2dc961524ca6 292 ProSitePatterns PS00683 Rhodanese C-terminal signature. 265 275 - T 10-03-2017 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CpPa04_RS02445 368ebf514a145159c21e2dc961524ca6 292 Gene3D G3DSA:3.40.250.10 159 286 3.5E-33 T 10-03-2017 IPR001763 Rhodanese-like domain CpPa04_RS02445 368ebf514a145159c21e2dc961524ca6 292 ProSitePatterns PS00380 Rhodanese signature 1. 47 58 - T 10-03-2017 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CpPa04_RS02445 368ebf514a145159c21e2dc961524ca6 292 SMART SM00450 21 135 9.1E-18 T 10-03-2017 IPR001763 Rhodanese-like domain CpPa04_RS02445 368ebf514a145159c21e2dc961524ca6 292 SMART SM00450 160 281 6.1E-22 T 10-03-2017 IPR001763 Rhodanese-like domain CpPa04_RS02445 368ebf514a145159c21e2dc961524ca6 292 SUPERFAMILY SSF52821 160 286 2.49E-32 T 10-03-2017 IPR001763 Rhodanese-like domain CpPa04_RS02445 368ebf514a145159c21e2dc961524ca6 292 Pfam PF00581 Rhodanese-like domain 163 276 2.6E-18 T 10-03-2017 IPR001763 Rhodanese-like domain CpPa04_RS02445 368ebf514a145159c21e2dc961524ca6 292 Pfam PF00581 Rhodanese-like domain 22 131 2.7E-14 T 10-03-2017 IPR001763 Rhodanese-like domain CpPa04_RS02445 368ebf514a145159c21e2dc961524ca6 292 SUPERFAMILY SSF52821 14 151 9.95E-35 T 10-03-2017 IPR001763 Rhodanese-like domain CpPa04_RS02445 368ebf514a145159c21e2dc961524ca6 292 Gene3D G3DSA:3.40.250.10 14 150 2.2E-34 T 10-03-2017 IPR001763 Rhodanese-like domain CpPa04_RS07425 fc05f26336560f708ba25f09b34c5243 72 SUPERFAMILY SSF53335 1 68 3.97E-22 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS07425 fc05f26336560f708ba25f09b34c5243 72 Pfam PF02384 N-6 DNA Methylase 1 70 6.7E-21 T 10-03-2017 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CpPa04_RS07425 fc05f26336560f708ba25f09b34c5243 72 Gene3D G3DSA:3.40.50.150 23 58 3.7E-8 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS07425 fc05f26336560f708ba25f09b34c5243 72 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 45 59 4.5E-7 T 10-03-2017 CpPa04_RS07425 fc05f26336560f708ba25f09b34c5243 72 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 21 37 4.5E-7 T 10-03-2017 CpPa04_RS05245 2a5e464e4a4ea599671329687c2dab77 362 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 35 271 4.6E-65 T 10-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CpPa04_RS05245 2a5e464e4a4ea599671329687c2dab77 362 ProSitePatterns PS01218 TatC family signature. 199 218 - T 10-03-2017 IPR019820 Sec-independent periplasmic protein translocase, conserved site CpPa04_RS05245 2a5e464e4a4ea599671329687c2dab77 362 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 149 175 1.5E-39 T 10-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CpPa04_RS05245 2a5e464e4a4ea599671329687c2dab77 362 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 131 149 1.5E-39 T 10-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CpPa04_RS05245 2a5e464e4a4ea599671329687c2dab77 362 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 34 61 1.5E-39 T 10-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CpPa04_RS05245 2a5e464e4a4ea599671329687c2dab77 362 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 199 227 1.5E-39 T 10-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CpPa04_RS05245 2a5e464e4a4ea599671329687c2dab77 362 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 27 286 17.897 T 10-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CpPa04_RS05245 2a5e464e4a4ea599671329687c2dab77 362 Pfam PF00902 Sec-independent protein translocase protein (TatC) 37 265 9.3E-63 T 10-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CpPa04_RS04965 2fbebc481a24cd171f61b785f1375e14 193 SUPERFAMILY SSF46785 14 89 2.28E-15 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS04965 2fbebc481a24cd171f61b785f1375e14 193 Gene3D G3DSA:1.10.10.10 94 170 2.0E-29 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS04965 2fbebc481a24cd171f61b785f1375e14 193 Gene3D G3DSA:1.10.10.10 15 90 1.1E-20 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS04965 2fbebc481a24cd171f61b785f1375e14 193 Pfam PF04079 Segregation and condensation complex subunit ScpB 19 179 1.1E-48 T 10-03-2017 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CpPa04_RS04965 2fbebc481a24cd171f61b785f1375e14 193 PIRSF PIRSF019345 12 193 1.8E-48 T 10-03-2017 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CpPa04_RS04965 2fbebc481a24cd171f61b785f1375e14 193 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 16 180 1.8E-28 T 10-03-2017 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CpPa04_RS04965 2fbebc481a24cd171f61b785f1375e14 193 SUPERFAMILY SSF46785 94 170 7.49E-19 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS08840 c68ba59e1e4997308d32be2c83710321 218 Gene3D G3DSA:3.30.70.1450 156 214 3.3E-7 T 10-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CpPa04_RS08840 c68ba59e1e4997308d32be2c83710321 218 SUPERFAMILY SSF116726 137 214 7.32E-10 T 10-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CpPa04_RS08840 c68ba59e1e4997308d32be2c83710321 218 Pfam PF02254 TrkA-N domain 12 127 2.1E-21 T 10-03-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CpPa04_RS08840 c68ba59e1e4997308d32be2c83710321 218 SUPERFAMILY SSF51735 12 139 1.13E-28 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS08840 c68ba59e1e4997308d32be2c83710321 218 Gene3D G3DSA:3.40.50.720 9 149 1.6E-27 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS06400 fb8d7a9fb26ce375c0ac4ed0968a9afc 197 Pfam PF01066 CDP-alcohol phosphatidyltransferase 20 90 3.1E-14 T 10-03-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CpPa04_RS06400 fb8d7a9fb26ce375c0ac4ed0968a9afc 197 PIRSF PIRSF000847 16 197 1.3E-43 T 10-03-2017 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 CpPa04_RS06400 fb8d7a9fb26ce375c0ac4ed0968a9afc 197 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 19 191 1.1E-35 T 10-03-2017 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 CpPa04_RS06400 fb8d7a9fb26ce375c0ac4ed0968a9afc 197 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 90 - T 10-03-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CpPa04_RS02940 447205e45d3c82e0dfcc7573225b6e42 300 PIRSF PIRSF003097 1 300 2.5E-56 T 10-03-2017 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 CpPa04_RS02940 447205e45d3c82e0dfcc7573225b6e42 300 Pfam PF02687 FtsX-like permease family 178 290 7.3E-12 T 10-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 CpPa04_RS03635 633165e16b0ac4f2289ad9d1da21662f 188 Pfam PF04417 Protein of unknown function (DUF501) 27 136 5.0E-24 T 10-03-2017 IPR007511 Protein of unknown function DUF501 CpPa04_RS07980 a734ce67029de715ba0a27270266092e 276 Pfam PF02645 Uncharacterised protein, DegV family COG1307 36 257 7.1E-49 T 10-03-2017 IPR003797 DegV CpPa04_RS07980 a734ce67029de715ba0a27270266092e 276 Gene3D G3DSA:3.30.1180.10 133 257 3.5E-34 T 10-03-2017 CpPa04_RS07980 a734ce67029de715ba0a27270266092e 276 SUPERFAMILY SSF82549 1 258 1.7E-57 T 10-03-2017 CpPa04_RS07980 a734ce67029de715ba0a27270266092e 276 Gene3D G3DSA:3.40.50.10170 35 127 9.1E-25 T 10-03-2017 CpPa04_RS07980 a734ce67029de715ba0a27270266092e 276 Gene3D G3DSA:3.40.50.10170 1 34 2.6E-6 T 10-03-2017 CpPa04_RS07980 a734ce67029de715ba0a27270266092e 276 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 36 256 1.7E-46 T 10-03-2017 IPR003797 DegV CpPa04_RS03705 03aa64bfb9482ad2c21953f283b0d2ad 429 Pfam PF00464 Serine hydroxymethyltransferase 10 391 1.9E-156 T 10-03-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CpPa04_RS03705 03aa64bfb9482ad2c21953f283b0d2ad 429 SUPERFAMILY SSF53383 7 421 2.09E-164 T 10-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase CpPa04_RS03705 03aa64bfb9482ad2c21953f283b0d2ad 429 Gene3D G3DSA:3.90.1150.10 285 421 2.9E-45 T 10-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CpPa04_RS03705 03aa64bfb9482ad2c21953f283b0d2ad 429 Gene3D G3DSA:3.40.640.10 39 284 1.0E-101 T 10-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CpPa04_RS03705 03aa64bfb9482ad2c21953f283b0d2ad 429 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 9 421 48.828 T 10-03-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CpPa04_RS03705 03aa64bfb9482ad2c21953f283b0d2ad 429 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 224 240 - T 10-03-2017 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CpPa04_RS03705 03aa64bfb9482ad2c21953f283b0d2ad 429 PIRSF PIRSF000412 2 424 1.9E-150 T 10-03-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CpPa04_RS09525 2cb35de6867f1862184488061a838df7 480 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 447 475 1.2E-4 T 10-03-2017 IPR019931 LPXTG cell wall anchor domain CpPa04_RS09525 2cb35de6867f1862184488061a838df7 480 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 180 301 2.4E-13 T 10-03-2017 IPR026466 Fimbrial isopeptide formation D2 domain CpPa04_RS09525 2cb35de6867f1862184488061a838df7 480 Pfam PF05738 Cna protein B-type domain 337 420 5.6E-8 T 10-03-2017 IPR008454 Collagen-binding surface protein Cna-like, B-type domain CpPa04_RS06355 798c9cfd142aba68353d13b8b5e18bf6 201 Pfam PF02631 RecX family 69 189 1.5E-22 T 10-03-2017 IPR003783 Regulatory protein RecX GO:0006282 CpPa04_RS06355 798c9cfd142aba68353d13b8b5e18bf6 201 Hamap MF_01114 Regulatory protein RecX [recX]. 28 195 14.097 T 10-03-2017 IPR003783 Regulatory protein RecX GO:0006282 CpPa04_RS06355 798c9cfd142aba68353d13b8b5e18bf6 201 Gene3D G3DSA:1.10.10.10 43 87 1.4E-7 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS06355 798c9cfd142aba68353d13b8b5e18bf6 201 Gene3D G3DSA:1.10.10.10 89 132 1.3E-4 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS00890 15580ad386f57541ce23d86b4367b2e4 343 SUPERFAMILY SSF55347 130 330 2.77E-56 T 10-03-2017 CpPa04_RS00890 15580ad386f57541ce23d86b4367b2e4 343 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 343 34.513 T 10-03-2017 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CpPa04_RS00890 15580ad386f57541ce23d86b4367b2e4 343 PIRSF PIRSF000148 1 343 1.1E-106 T 10-03-2017 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CpPa04_RS00890 15580ad386f57541ce23d86b4367b2e4 343 SUPERFAMILY SSF51735 1 157 1.98E-46 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS00890 15580ad386f57541ce23d86b4367b2e4 343 SMART SM00859 3 121 6.0E-37 T 10-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CpPa04_RS00890 15580ad386f57541ce23d86b4367b2e4 343 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 117 1.5E-30 T 10-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CpPa04_RS00890 15580ad386f57541ce23d86b4367b2e4 343 Gene3D G3DSA:3.30.360.10 143 325 4.2E-65 T 10-03-2017 CpPa04_RS00890 15580ad386f57541ce23d86b4367b2e4 343 Gene3D G3DSA:3.40.50.720 2 142 1.3E-57 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS00890 15580ad386f57541ce23d86b4367b2e4 343 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 140 329 5.5E-49 T 10-03-2017 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CpPa04_RS00890 15580ad386f57541ce23d86b4367b2e4 343 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 4 343 8.4E-127 T 10-03-2017 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CpPa04_RS00890 15580ad386f57541ce23d86b4367b2e4 343 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 244 258 - T 10-03-2017 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CpPa04_RS06465 f6edbda495bd6f5d57bed826aaf5aa48 303 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 187 240 2.5E-13 T 10-03-2017 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 CpPa04_RS06465 f6edbda495bd6f5d57bed826aaf5aa48 303 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 29 186 1.7E-52 T 10-03-2017 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 CpPa04_RS06465 f6edbda495bd6f5d57bed826aaf5aa48 303 SUPERFAMILY SSF88697 243 299 6.96E-13 T 10-03-2017 IPR015947 PUA-like domain CpPa04_RS06465 f6edbda495bd6f5d57bed826aaf5aa48 303 Pfam PF09142 tRNA Pseudouridine synthase II, C terminal 243 298 7.3E-20 T 10-03-2017 IPR015225 tRNA pseudouridine synthase II, TruB, subfamily 2, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CpPa04_RS06465 f6edbda495bd6f5d57bed826aaf5aa48 303 SUPERFAMILY SSF55120 8 228 1.92E-74 T 10-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CpPa04_RS06465 f6edbda495bd6f5d57bed826aaf5aa48 303 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 7 295 17.86 T 10-03-2017 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CpPa04_RS06465 f6edbda495bd6f5d57bed826aaf5aa48 303 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 8 225 1.5E-66 T 10-03-2017 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CpPa04_RS10575 4579646e1d36cf6d00df3eab3afb06ad 214 PRINTS PR00096 Glutamine amidotransferase superfamily signature 183 196 3.8E-13 T 10-03-2017 CpPa04_RS10575 4579646e1d36cf6d00df3eab3afb06ad 214 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 3.8E-13 T 10-03-2017 CpPa04_RS10575 4579646e1d36cf6d00df3eab3afb06ad 214 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 3.8E-13 T 10-03-2017 CpPa04_RS10575 4579646e1d36cf6d00df3eab3afb06ad 214 SUPERFAMILY SSF52317 5 207 1.43E-39 T 10-03-2017 IPR029062 Class I glutamine amidotransferase-like CpPa04_RS10575 4579646e1d36cf6d00df3eab3afb06ad 214 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 6.4E-5 T 10-03-2017 CpPa04_RS10575 4579646e1d36cf6d00df3eab3afb06ad 214 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 6.4E-5 T 10-03-2017 CpPa04_RS10575 4579646e1d36cf6d00df3eab3afb06ad 214 Gene3D G3DSA:3.40.50.880 7 206 1.5E-45 T 10-03-2017 IPR029062 Class I glutamine amidotransferase-like CpPa04_RS10575 4579646e1d36cf6d00df3eab3afb06ad 214 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 7 203 2.9E-36 T 10-03-2017 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CpPa04_RS10575 4579646e1d36cf6d00df3eab3afb06ad 214 PRINTS PR00097 Anthranilate synthase component II signature 79 90 7.8E-22 T 10-03-2017 CpPa04_RS10575 4579646e1d36cf6d00df3eab3afb06ad 214 PRINTS PR00097 Anthranilate synthase component II signature 8 22 7.8E-22 T 10-03-2017 CpPa04_RS10575 4579646e1d36cf6d00df3eab3afb06ad 214 PRINTS PR00097 Anthranilate synthase component II signature 183 196 7.8E-22 T 10-03-2017 CpPa04_RS10575 4579646e1d36cf6d00df3eab3afb06ad 214 PRINTS PR00097 Anthranilate synthase component II signature 52 61 7.8E-22 T 10-03-2017 CpPa04_RS10575 4579646e1d36cf6d00df3eab3afb06ad 214 Pfam PF00117 Glutamine amidotransferase class-I 9 204 1.4E-36 T 10-03-2017 IPR017926 Glutamine amidotransferase CpPa04_RS04945 94e3644223a944a7215155f99d2bcf2c 201 Pfam PF13500 AAA domain 69 176 1.2E-10 T 10-03-2017 CpPa04_RS04945 94e3644223a944a7215155f99d2bcf2c 201 SUPERFAMILY SSF52540 3 176 6.98E-24 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04945 94e3644223a944a7215155f99d2bcf2c 201 Gene3D G3DSA:3.40.50.300 71 178 2.0E-16 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04945 94e3644223a944a7215155f99d2bcf2c 201 Gene3D G3DSA:3.40.50.300 3 60 2.7E-9 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02775 a6031fd54b996c245b79c1c32e197351 462 TIGRFAM TIGR03624 TIGR03624: putative hydrolase 60 413 3.1E-114 T 10-03-2017 IPR018766 Zinicin-like metallopeptidase type 2 CpPa04_RS02775 a6031fd54b996c245b79c1c32e197351 462 Pfam PF10103 Zinicin-like metallopeptidase 60 410 1.3E-102 T 10-03-2017 IPR018766 Zinicin-like metallopeptidase type 2 CpPa04_RS02775 a6031fd54b996c245b79c1c32e197351 462 SUPERFAMILY SSF55486 60 411 6.15E-98 T 10-03-2017 CpPa04_RS02875 ad994790af65313347fc0230d8f65e61 479 ProSitePatterns PS00218 Amino acid permeases signature. 49 79 - T 10-03-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CpPa04_RS02875 ad994790af65313347fc0230d8f65e61 479 PIRSF PIRSF006060 5 476 1.1E-58 T 10-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CpPa04_RS02875 ad994790af65313347fc0230d8f65e61 479 Pfam PF00324 Amino acid permease 24 451 1.4E-100 T 10-03-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CpPa04_RS07020 04c300e7a44ec249b97463a860119bb4 313 SMART SM00870 10 313 2.8E-93 T 10-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 CpPa04_RS07020 04c300e7a44ec249b97463a860119bb4 313 Gene3D G3DSA:3.40.50.40 201 310 9.6E-24 T 10-03-2017 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 CpPa04_RS07020 04c300e7a44ec249b97463a860119bb4 313 Pfam PF00710 Asparaginase, N-terminal 10 181 4.6E-47 T 10-03-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CpPa04_RS07020 04c300e7a44ec249b97463a860119bb4 313 PRINTS PR00139 Asparaginase/glutaminase family signature 88 106 7.8E-17 T 10-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 CpPa04_RS07020 04c300e7a44ec249b97463a860119bb4 313 PRINTS PR00139 Asparaginase/glutaminase family signature 248 266 7.8E-17 T 10-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 CpPa04_RS07020 04c300e7a44ec249b97463a860119bb4 313 PRINTS PR00139 Asparaginase/glutaminase family signature 11 22 7.8E-17 T 10-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 CpPa04_RS07020 04c300e7a44ec249b97463a860119bb4 313 SUPERFAMILY SSF53774 6 311 3.79E-75 T 10-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 CpPa04_RS07020 04c300e7a44ec249b97463a860119bb4 313 Gene3D G3DSA:3.40.50.1170 7 180 1.7E-49 T 10-03-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CpPa04_RS07020 04c300e7a44ec249b97463a860119bb4 313 PIRSF PIRSF001220 5 311 7.8E-79 T 10-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 CpPa04_RS07020 04c300e7a44ec249b97463a860119bb4 313 PIRSF PIRSF500176 7 312 1.4E-81 T 10-03-2017 CpPa04_RS05755 76eb76741f102c06b8025ef82ee191d4 313 SUPERFAMILY SSF53671 2 307 4.84E-94 T 10-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CpPa04_RS05755 76eb76741f102c06b8025ef82ee191d4 313 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 303 1.3E-22 T 10-03-2017 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CpPa04_RS05755 76eb76741f102c06b8025ef82ee191d4 313 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 1 307 40.11 T 10-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CpPa04_RS05755 76eb76741f102c06b8025ef82ee191d4 313 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 2 305 2.7E-90 T 10-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CpPa04_RS05755 76eb76741f102c06b8025ef82ee191d4 313 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 150 3.3E-39 T 10-03-2017 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CpPa04_RS05755 76eb76741f102c06b8025ef82ee191d4 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 1.5E-18 T 10-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CpPa04_RS05755 76eb76741f102c06b8025ef82ee191d4 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 1.5E-18 T 10-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CpPa04_RS05755 76eb76741f102c06b8025ef82ee191d4 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 258 267 1.5E-18 T 10-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CpPa04_RS05755 76eb76741f102c06b8025ef82ee191d4 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 138 149 1.5E-18 T 10-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CpPa04_RS05755 76eb76741f102c06b8025ef82ee191d4 313 Gene3D G3DSA:3.40.50.1370 147 292 1.1E-47 T 10-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CpPa04_RS05755 76eb76741f102c06b8025ef82ee191d4 313 Gene3D G3DSA:3.40.50.1370 2 146 1.3E-49 T 10-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CpPa04_RS05755 76eb76741f102c06b8025ef82ee191d4 313 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 10-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CpPa04_RS05755 76eb76741f102c06b8025ef82ee191d4 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 2.1E-32 T 10-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CpPa04_RS05755 76eb76741f102c06b8025ef82ee191d4 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 262 267 2.1E-32 T 10-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CpPa04_RS05755 76eb76741f102c06b8025ef82ee191d4 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 77 86 2.1E-32 T 10-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CpPa04_RS05755 76eb76741f102c06b8025ef82ee191d4 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 137 154 2.1E-32 T 10-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CpPa04_RS05755 76eb76741f102c06b8025ef82ee191d4 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 2.1E-32 T 10-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CpPa04_RS05755 76eb76741f102c06b8025ef82ee191d4 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 221 230 2.1E-32 T 10-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CpPa04_RS00150 6843c10366a52f92c51eac2e61ece059 350 Pfam PF01497 Periplasmic binding protein 96 323 2.0E-31 T 10-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CpPa04_RS00150 6843c10366a52f92c51eac2e61ece059 350 Gene3D G3DSA:3.40.50.1980 76 194 4.8E-39 T 10-03-2017 CpPa04_RS00150 6843c10366a52f92c51eac2e61ece059 350 SUPERFAMILY SSF53807 78 343 1.22E-65 T 10-03-2017 CpPa04_RS00150 6843c10366a52f92c51eac2e61ece059 350 Gene3D G3DSA:3.40.50.1980 195 347 9.3E-35 T 10-03-2017 CpPa04_RS08325 42f3dca37064c9a9225bb9ee2be1d34c 129 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 126 2.5E-33 T 10-03-2017 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CpPa04_RS08325 42f3dca37064c9a9225bb9ee2be1d34c 129 SUPERFAMILY SSF56214 3 127 1.31E-23 T 10-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CpPa04_RS08325 42f3dca37064c9a9225bb9ee2be1d34c 129 Gene3D G3DSA:3.90.470.20 2 126 3.8E-40 T 10-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CpPa04_RS08325 42f3dca37064c9a9225bb9ee2be1d34c 129 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 6 127 7.0E-9 T 10-03-2017 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CpPa04_RS08325 42f3dca37064c9a9225bb9ee2be1d34c 129 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 3 124 2.6E-20 T 10-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CpPa04_RS08325 42f3dca37064c9a9225bb9ee2be1d34c 129 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 1 128 19.75 T 10-03-2017 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CpPa04_RS07740 6d7bbac7196d4b75aedd27ffd79a989f 283 Gene3D G3DSA:3.40.1190.20 2 280 1.5E-84 T 10-03-2017 IPR029056 Ribokinase-like CpPa04_RS07740 6d7bbac7196d4b75aedd27ffd79a989f 283 SUPERFAMILY SSF53613 3 279 2.46E-68 T 10-03-2017 IPR029056 Ribokinase-like CpPa04_RS07740 6d7bbac7196d4b75aedd27ffd79a989f 283 Pfam PF08543 Phosphomethylpyrimidine kinase 91 258 2.9E-17 T 10-03-2017 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-964975 CpPa04_RS07740 6d7bbac7196d4b75aedd27ffd79a989f 283 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 2 282 2.9E-99 T 10-03-2017 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CpPa04_RS07740 6d7bbac7196d4b75aedd27ffd79a989f 283 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 282 50.983 T 10-03-2017 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 CpPa04_RS10640 153937b4c96ed6f394fb517b1ff8c464 368 Pfam PF00293 NUDIX domain 245 343 9.9E-19 T 10-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 CpPa04_RS10640 153937b4c96ed6f394fb517b1ff8c464 368 Gene3D G3DSA:3.90.79.10 235 352 2.5E-25 T 10-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CpPa04_RS10640 153937b4c96ed6f394fb517b1ff8c464 368 SUPERFAMILY SSF55811 235 348 9.07E-26 T 10-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CpPa04_RS10640 153937b4c96ed6f394fb517b1ff8c464 368 ProSitePatterns PS00893 Nudix box signature. 254 275 - T 10-03-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CpPa04_RS03445 7e4426e135ff98c5e10b515c6c9bd679 301 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 28 229 8.9E-25 T 10-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS03445 7e4426e135ff98c5e10b515c6c9bd679 301 Gene3D G3DSA:3.40.1010.10 28 135 2.8E-10 T 10-03-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS03445 7e4426e135ff98c5e10b515c6c9bd679 301 PIRSF PIRSF005917 20 300 1.2E-87 T 10-03-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CpPa04_RS03445 7e4426e135ff98c5e10b515c6c9bd679 301 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 30 295 4.3E-64 T 10-03-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CpPa04_RS03445 7e4426e135ff98c5e10b515c6c9bd679 301 Gene3D G3DSA:3.30.950.10 136 247 2.4E-38 T 10-03-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS03445 7e4426e135ff98c5e10b515c6c9bd679 301 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 27 246 32.246 T 10-03-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CpPa04_RS03445 7e4426e135ff98c5e10b515c6c9bd679 301 SUPERFAMILY SSF53790 28 244 2.36E-67 T 10-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS00225 f6e35ccfd7839489fc01f1ce378a1941 374 SUPERFAMILY SSF81345 25 364 3.79E-84 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS00225 f6e35ccfd7839489fc01f1ce378a1941 374 Pfam PF01032 FecCD transport family 42 363 1.8E-93 T 10-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CpPa04_RS00225 f6e35ccfd7839489fc01f1ce378a1941 374 Gene3D G3DSA:1.10.3470.10 29 366 3.5E-104 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS00885 110d2e4a278b267f79624b60356ae807 1100 Gene3D G3DSA:2.60.40.1280 69 237 5.1E-33 T 10-03-2017 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 CpPa04_RS00885 110d2e4a278b267f79624b60356ae807 1100 SUPERFAMILY SSF49401 216 351 9.94E-6 T 10-03-2017 IPR008966 Adhesion domain CpPa04_RS00885 110d2e4a278b267f79624b60356ae807 1100 SUPERFAMILY SSF49401 73 193 6.34E-26 T 10-03-2017 IPR008966 Adhesion domain CpPa04_RS03085 848657f003be47ec97c78bc8765efd5c 119 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 28 116 3.4E-22 T 10-03-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 CpPa04_RS03085 848657f003be47ec97c78bc8765efd5c 119 Gene3D G3DSA:3.10.50.40 13 118 2.1E-31 T 10-03-2017 CpPa04_RS03085 848657f003be47ec97c78bc8765efd5c 119 SUPERFAMILY SSF54534 14 118 5.5E-33 T 10-03-2017 CpPa04_RS05820 4d53a59e9d2f47258d723b0388b9b799 291 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 130 209 2.7E-6 T 10-03-2017 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CpPa04_RS05820 4d53a59e9d2f47258d723b0388b9b799 291 SUPERFAMILY SSF51735 121 285 1.34E-25 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS05820 4d53a59e9d2f47258d723b0388b9b799 291 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 20 102 1.2E-18 T 10-03-2017 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CpPa04_RS05820 4d53a59e9d2f47258d723b0388b9b799 291 Gene3D G3DSA:3.40.50.720 120 286 2.8E-35 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS05820 4d53a59e9d2f47258d723b0388b9b799 291 SUPERFAMILY SSF53223 14 114 1.04E-24 T 10-03-2017 CpPa04_RS05820 4d53a59e9d2f47258d723b0388b9b799 291 Gene3D G3DSA:3.40.192.10 14 119 5.6E-33 T 10-03-2017 CpPa04_RS05820 4d53a59e9d2f47258d723b0388b9b799 291 TIGRFAM TIGR01809 Shik-DH-AROM: shikimate-5-dehydrogenase 16 281 1.2E-64 T 10-03-2017 IPR010110 Shikimate dehydrogenase, AroM-type GO:0004764|GO:0005737|GO:0055114 KEGG: 00400+4.2.1.10+1.1.1.25+2.7.1.71+2.5.1.19+4.2.3.4|MetaCyc: PWY-6163|MetaCyc: PWY-6164|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CpPa04_RS02060 3e29d5e89c215698e53281c3e4baafa4 93 Gene3D G3DSA:1.10.287.1060 2 93 5.5E-25 T 10-03-2017 CpPa04_RS02060 3e29d5e89c215698e53281c3e4baafa4 93 Pfam PF06013 Proteins of 100 residues with WXG 2 83 6.0E-18 T 10-03-2017 IPR010310 Type VII secretion system ESAT-6-like CpPa04_RS02060 3e29d5e89c215698e53281c3e4baafa4 93 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 1 89 2.8E-22 T 10-03-2017 IPR010310 Type VII secretion system ESAT-6-like CpPa04_RS02060 3e29d5e89c215698e53281c3e4baafa4 93 ProDom PD020150 ESAT-6-LIKE ANTIGEN ESXR CFP7 LOW WEIGHT ESXQ CFP-7 TB10.4 MOLECULAR 2 93 1.0E-6 T 10-03-2017 CpPa04_RS02060 3e29d5e89c215698e53281c3e4baafa4 93 SUPERFAMILY SSF140453 1 93 7.72E-23 T 10-03-2017 IPR010310 Type VII secretion system ESAT-6-like CpPa04_RS01250 669fbef62381b41fc66e6bdaa237a81e 249 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 10-03-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CpPa04_RS01250 669fbef62381b41fc66e6bdaa237a81e 249 SUPERFAMILY SSF46548 121 240 4.01E-21 T 10-03-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 CpPa04_RS01250 669fbef62381b41fc66e6bdaa237a81e 249 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 159 170 - T 10-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CpPa04_RS01250 669fbef62381b41fc66e6bdaa237a81e 249 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 14 237 3.4E-26 T 10-03-2017 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CpPa04_RS01250 669fbef62381b41fc66e6bdaa237a81e 249 Gene3D G3DSA:3.10.20.30 1 111 5.0E-21 T 10-03-2017 IPR012675 Beta-grasp domain CpPa04_RS01250 669fbef62381b41fc66e6bdaa237a81e 249 SUPERFAMILY SSF54292 1 116 2.88E-17 T 10-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CpPa04_RS01250 669fbef62381b41fc66e6bdaa237a81e 249 Pfam PF12838 4Fe-4S dicluster domain 158 227 1.3E-10 T 10-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CpPa04_RS01250 669fbef62381b41fc66e6bdaa237a81e 249 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 120 1.2E-20 T 10-03-2017 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CpPa04_RS01250 669fbef62381b41fc66e6bdaa237a81e 249 Gene3D G3DSA:1.10.1060.10 112 237 2.1E-19 T 10-03-2017 CpPa04_RS08090 e6a8509edff8e6928c68b3693ec67a5e 934 SUPERFAMILY SSF56322 311 681 1.7E-105 T 10-03-2017 IPR005801 ADC synthase GO:0009058 CpPa04_RS08090 e6a8509edff8e6928c68b3693ec67a5e 934 Pfam PF01063 Amino-transferase class IV 707 903 1.9E-14 T 10-03-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CpPa04_RS08090 e6a8509edff8e6928c68b3693ec67a5e 934 SUPERFAMILY SSF56752 708 912 2.22E-17 T 10-03-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CpPa04_RS08090 e6a8509edff8e6928c68b3693ec67a5e 934 Gene3D G3DSA:3.20.10.10 820 912 5.9E-9 T 10-03-2017 CpPa04_RS08090 e6a8509edff8e6928c68b3693ec67a5e 934 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 24 216 2.7E-47 T 10-03-2017 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CpPa04_RS08090 e6a8509edff8e6928c68b3693ec67a5e 934 SUPERFAMILY SSF52317 24 222 1.15E-53 T 10-03-2017 IPR029062 Class I glutamine amidotransferase-like CpPa04_RS08090 e6a8509edff8e6928c68b3693ec67a5e 934 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 322 675 4.9E-101 T 10-03-2017 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 CpPa04_RS08090 e6a8509edff8e6928c68b3693ec67a5e 934 Gene3D G3DSA:3.60.120.10 293 680 2.9E-121 T 10-03-2017 IPR005801 ADC synthase GO:0009058 CpPa04_RS08090 e6a8509edff8e6928c68b3693ec67a5e 934 Pfam PF00425 chorismate binding enzyme 416 671 5.3E-88 T 10-03-2017 IPR015890 Chorismate-utilising enzyme, C-terminal CpPa04_RS08090 e6a8509edff8e6928c68b3693ec67a5e 934 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 105 121 1.9E-5 T 10-03-2017 CpPa04_RS08090 e6a8509edff8e6928c68b3693ec67a5e 934 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 88 1.9E-5 T 10-03-2017 CpPa04_RS08090 e6a8509edff8e6928c68b3693ec67a5e 934 Pfam PF00117 Glutamine amidotransferase class-I 27 215 3.2E-45 T 10-03-2017 IPR017926 Glutamine amidotransferase CpPa04_RS08090 e6a8509edff8e6928c68b3693ec67a5e 934 PRINTS PR00096 Glutamine amidotransferase superfamily signature 105 116 6.7E-12 T 10-03-2017 CpPa04_RS08090 e6a8509edff8e6928c68b3693ec67a5e 934 PRINTS PR00096 Glutamine amidotransferase superfamily signature 194 207 6.7E-12 T 10-03-2017 CpPa04_RS08090 e6a8509edff8e6928c68b3693ec67a5e 934 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 86 6.7E-12 T 10-03-2017 CpPa04_RS08090 e6a8509edff8e6928c68b3693ec67a5e 934 Gene3D G3DSA:3.40.50.880 24 217 2.8E-62 T 10-03-2017 IPR029062 Class I glutamine amidotransferase-like CpPa04_RS08090 e6a8509edff8e6928c68b3693ec67a5e 934 PRINTS PR00097 Anthranilate synthase component II signature 105 116 2.2E-27 T 10-03-2017 CpPa04_RS08090 e6a8509edff8e6928c68b3693ec67a5e 934 PRINTS PR00097 Anthranilate synthase component II signature 130 138 2.2E-27 T 10-03-2017 CpPa04_RS08090 e6a8509edff8e6928c68b3693ec67a5e 934 PRINTS PR00097 Anthranilate synthase component II signature 77 86 2.2E-27 T 10-03-2017 CpPa04_RS08090 e6a8509edff8e6928c68b3693ec67a5e 934 PRINTS PR00097 Anthranilate synthase component II signature 151 163 2.2E-27 T 10-03-2017 CpPa04_RS08090 e6a8509edff8e6928c68b3693ec67a5e 934 PRINTS PR00097 Anthranilate synthase component II signature 194 207 2.2E-27 T 10-03-2017 CpPa04_RS08090 e6a8509edff8e6928c68b3693ec67a5e 934 PRINTS PR00097 Anthranilate synthase component II signature 25 39 2.2E-27 T 10-03-2017 CpPa04_RS07790 511aa1bc61abf4df5237177ed0110b45 728 Pfam PF02446 4-alpha-glucanotransferase 197 695 1.7E-95 T 10-03-2017 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 CpPa04_RS07790 511aa1bc61abf4df5237177ed0110b45 728 Gene3D G3DSA:3.20.20.80 645 702 5.4E-134 T 10-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CpPa04_RS07790 511aa1bc61abf4df5237177ed0110b45 728 Gene3D G3DSA:3.20.20.80 191 602 5.4E-134 T 10-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CpPa04_RS07790 511aa1bc61abf4df5237177ed0110b45 728 SUPERFAMILY SSF51445 641 715 2.68E-119 T 10-03-2017 IPR017853 Glycoside hydrolase superfamily CpPa04_RS07790 511aa1bc61abf4df5237177ed0110b45 728 SUPERFAMILY SSF51445 192 599 2.68E-119 T 10-03-2017 IPR017853 Glycoside hydrolase superfamily CpPa04_RS07790 511aa1bc61abf4df5237177ed0110b45 728 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 150 706 1.0E-80 T 10-03-2017 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 CpPa04_RS09355 cd1271471bd9d0824996ae62d8cc4fd3 354 Pfam PF02222 ATP-grasp domain 90 253 2.4E-29 T 10-03-2017 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CpPa04_RS09355 cd1271471bd9d0824996ae62d8cc4fd3 354 Gene3D G3DSA:3.30.470.20 124 342 9.3E-47 T 10-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CpPa04_RS09355 cd1271471bd9d0824996ae62d8cc4fd3 354 SUPERFAMILY SSF52440 6 78 1.41E-5 T 10-03-2017 IPR016185 Pre-ATP-grasp domain CpPa04_RS09355 cd1271471bd9d0824996ae62d8cc4fd3 354 Gene3D G3DSA:3.30.1490.20 94 123 1.2E-5 T 10-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CpPa04_RS09355 cd1271471bd9d0824996ae62d8cc4fd3 354 Gene3D G3DSA:3.40.50.720 9 69 8.1E-4 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS09355 cd1271471bd9d0824996ae62d8cc4fd3 354 SUPERFAMILY SSF56059 80 272 1.11E-40 T 10-03-2017 CpPa04_RS09135 c47416a48928000056441a91ef5d9567 193 SUPERFAMILY SSF53271 13 193 7.34E-51 T 10-03-2017 IPR029057 Phosphoribosyltransferase-like CpPa04_RS09135 c47416a48928000056441a91ef5d9567 193 Gene3D G3DSA:3.40.50.2020 10 193 9.5E-73 T 10-03-2017 IPR029057 Phosphoribosyltransferase-like CpPa04_RS09135 c47416a48928000056441a91ef5d9567 193 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 21 187 9.8E-60 T 10-03-2017 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 CpPa04_RS09135 c47416a48928000056441a91ef5d9567 193 Pfam PF00156 Phosphoribosyl transferase domain 27 174 4.2E-22 T 10-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 CpPa04_RS01160 9fedac80002453841fc5fccfad3231d3 657 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 17 613 1.5E-223 T 10-03-2017 IPR004814 Oligopeptide transporter OPT CpPa04_RS01160 9fedac80002453841fc5fccfad3231d3 657 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 14 609 4.0E-105 T 10-03-2017 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 CpPa04_RS01160 9fedac80002453841fc5fccfad3231d3 657 Pfam PF03169 OPT oligopeptide transporter protein 17 613 1.9E-100 T 10-03-2017 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 CpPa04_RS01415 8108ceb86c53bc91d0ba3bdc352cc926 878 Pfam PF00122 E1-E2 ATPase 325 545 2.1E-28 T 10-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 CpPa04_RS01415 8108ceb86c53bc91d0ba3bdc352cc926 878 SUPERFAMILY SSF56784 691 868 3.34E-20 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS01415 8108ceb86c53bc91d0ba3bdc352cc926 878 SUPERFAMILY SSF81653 375 455 1.83E-10 T 10-03-2017 CpPa04_RS01415 8108ceb86c53bc91d0ba3bdc352cc926 878 Pfam PF00702 haloacid dehalogenase-like hydrolase 552 770 9.4E-16 T 10-03-2017 CpPa04_RS01415 8108ceb86c53bc91d0ba3bdc352cc926 878 Gene3D G3DSA:3.30.70.100 68 132 1.2E-4 T 10-03-2017 CpPa04_RS01415 8108ceb86c53bc91d0ba3bdc352cc926 878 SUPERFAMILY SSF81660 567 702 1.86E-8 T 10-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CpPa04_RS01415 8108ceb86c53bc91d0ba3bdc352cc926 878 Gene3D G3DSA:3.40.50.1000 528 571 5.4E-16 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS01415 8108ceb86c53bc91d0ba3bdc352cc926 878 Gene3D G3DSA:3.40.50.1000 691 842 5.4E-16 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS01415 8108ceb86c53bc91d0ba3bdc352cc926 878 Gene3D G3DSA:2.70.150.10 354 453 1.2E-5 T 10-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 CpPa04_RS01445 95eb0a8b20f1092bf4e73d39dff257f1 194 Pfam PF00578 AhpC/TSA family 67 171 5.1E-16 T 10-03-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CpPa04_RS01445 95eb0a8b20f1092bf4e73d39dff257f1 194 SUPERFAMILY SSF52833 58 193 7.68E-24 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS01445 95eb0a8b20f1092bf4e73d39dff257f1 194 Gene3D G3DSA:3.40.30.10 3 193 2.6E-30 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS04285 1a2fe64c77f457af98d4672d67f0dc59 261 PRINTS PR00123 ATP synthase A subunit signature 239 254 2.4E-16 T 10-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 CpPa04_RS04285 1a2fe64c77f457af98d4672d67f0dc59 261 PRINTS PR00123 ATP synthase A subunit signature 94 110 2.4E-16 T 10-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 CpPa04_RS04285 1a2fe64c77f457af98d4672d67f0dc59 261 PRINTS PR00123 ATP synthase A subunit signature 179 201 2.4E-16 T 10-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 CpPa04_RS04285 1a2fe64c77f457af98d4672d67f0dc59 261 Pfam PF00119 ATP synthase A chain 36 252 3.8E-46 T 10-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 CpPa04_RS04285 1a2fe64c77f457af98d4672d67f0dc59 261 Gene3D G3DSA:1.20.120.220 86 257 1.4E-36 T 10-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 CpPa04_RS04285 1a2fe64c77f457af98d4672d67f0dc59 261 ProSitePatterns PS00449 ATP synthase a subunit signature. 182 191 - T 10-03-2017 IPR023011 ATPase, F0 complex, subunit A, active site Reactome: R-HSA-163210 CpPa04_RS04285 1a2fe64c77f457af98d4672d67f0dc59 261 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 29 253 7.6E-37 T 10-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 CpPa04_RS04285 1a2fe64c77f457af98d4672d67f0dc59 261 SUPERFAMILY SSF81336 86 252 7.19E-35 T 10-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 CpPa04_RS04285 1a2fe64c77f457af98d4672d67f0dc59 261 Hamap MF_01393 ATP synthase subunit a [atpB]. 3 259 13.375 T 10-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 CpPa04_RS06140 88b74858573fca55f6139391aa298718 314 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 127 140 - T 10-03-2017 IPR020583 Inositol monophosphatase, metal-binding site CpPa04_RS06140 88b74858573fca55f6139391aa298718 314 PRINTS PR00377 Inositol monophosphatase superfamily signature 107 123 8.4E-31 T 10-03-2017 IPR000760 Inositol monophosphatase GO:0046854 CpPa04_RS06140 88b74858573fca55f6139391aa298718 314 PRINTS PR00377 Inositol monophosphatase superfamily signature 227 248 8.4E-31 T 10-03-2017 IPR000760 Inositol monophosphatase GO:0046854 CpPa04_RS06140 88b74858573fca55f6139391aa298718 314 PRINTS PR00377 Inositol monophosphatase superfamily signature 127 143 8.4E-31 T 10-03-2017 IPR000760 Inositol monophosphatase GO:0046854 CpPa04_RS06140 88b74858573fca55f6139391aa298718 314 PRINTS PR00377 Inositol monophosphatase superfamily signature 258 282 8.4E-31 T 10-03-2017 IPR000760 Inositol monophosphatase GO:0046854 CpPa04_RS06140 88b74858573fca55f6139391aa298718 314 PRINTS PR00377 Inositol monophosphatase superfamily signature 85 105 8.4E-31 T 10-03-2017 IPR000760 Inositol monophosphatase GO:0046854 CpPa04_RS06140 88b74858573fca55f6139391aa298718 314 SUPERFAMILY SSF56655 50 277 1.11E-65 T 10-03-2017 CpPa04_RS06140 88b74858573fca55f6139391aa298718 314 Gene3D G3DSA:3.40.190.80 204 309 3.3E-30 T 10-03-2017 CpPa04_RS06140 88b74858573fca55f6139391aa298718 314 Pfam PF00459 Inositol monophosphatase family 60 276 2.1E-53 T 10-03-2017 IPR000760 Inositol monophosphatase GO:0046854 CpPa04_RS06140 88b74858573fca55f6139391aa298718 314 Gene3D G3DSA:3.30.540.10 51 203 1.8E-40 T 10-03-2017 CpPa04_RS06140 88b74858573fca55f6139391aa298718 314 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 261 275 - T 10-03-2017 IPR020550 Inositol monophosphatase, conserved site GO:0046854 CpPa04_RS04615 edf7180e239f185e25aa49bc2603585f 191 Pfam PF13328 HD domain 15 134 2.5E-19 T 10-03-2017 IPR003607 HD/PDEase domain CpPa04_RS04615 edf7180e239f185e25aa49bc2603585f 191 SMART SM00471 31 140 1.2E-8 T 10-03-2017 IPR003607 HD/PDEase domain CpPa04_RS04615 edf7180e239f185e25aa49bc2603585f 191 SUPERFAMILY SSF109604 7 165 8.72E-35 T 10-03-2017 CpPa04_RS02620 1b7b92f64e38ff2eca705eebc00a8a4a 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 442 7.9E-13 T 10-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CpPa04_RS02620 1b7b92f64e38ff2eca705eebc00a8a4a 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 461 7.9E-13 T 10-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CpPa04_RS02620 1b7b92f64e38ff2eca705eebc00a8a4a 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 7.9E-13 T 10-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CpPa04_RS02620 1b7b92f64e38ff2eca705eebc00a8a4a 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 7.9E-13 T 10-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CpPa04_RS02620 1b7b92f64e38ff2eca705eebc00a8a4a 524 SUPERFAMILY SSF158472 182 230 8.5E-8 T 10-03-2017 CpPa04_RS02620 1b7b92f64e38ff2eca705eebc00a8a4a 524 SUPERFAMILY SSF47384 223 307 1.96E-16 T 10-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CpPa04_RS02620 1b7b92f64e38ff2eca705eebc00a8a4a 524 Gene3D G3DSA:3.30.565.10 311 464 1.0E-38 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS02620 1b7b92f64e38ff2eca705eebc00a8a4a 524 Gene3D G3DSA:1.10.287.130 232 303 7.7E-17 T 10-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CpPa04_RS02620 1b7b92f64e38ff2eca705eebc00a8a4a 524 SMART SM00304 180 232 3.8E-10 T 10-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CpPa04_RS02620 1b7b92f64e38ff2eca705eebc00a8a4a 524 SMART SM00388 240 307 8.8E-18 T 10-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CpPa04_RS02620 1b7b92f64e38ff2eca705eebc00a8a4a 524 Pfam PF00512 His Kinase A (phospho-acceptor) domain 241 307 3.5E-15 T 10-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CpPa04_RS02620 1b7b92f64e38ff2eca705eebc00a8a4a 524 Pfam PF00672 HAMP domain 163 228 7.9E-13 T 10-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CpPa04_RS02620 1b7b92f64e38ff2eca705eebc00a8a4a 524 SUPERFAMILY SSF55874 297 469 3.8E-41 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS02620 1b7b92f64e38ff2eca705eebc00a8a4a 524 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 462 4.4E-17 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS02620 1b7b92f64e38ff2eca705eebc00a8a4a 524 SMART SM00387 353 464 7.4E-29 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS09865 055f9161056bf1157f17b82d5d1bca99 381 SUPERFAMILY SSF53756 1 358 5.5E-65 T 10-03-2017 CpPa04_RS09865 055f9161056bf1157f17b82d5d1bca99 381 Pfam PF00534 Glycosyl transferases group 1 189 336 2.4E-20 T 10-03-2017 IPR001296 Glycosyl transferase, family 1 CpPa04_RS09865 055f9161056bf1157f17b82d5d1bca99 381 Gene3D G3DSA:3.40.50.2000 187 336 3.7E-21 T 10-03-2017 CpPa04_RS09865 055f9161056bf1157f17b82d5d1bca99 381 Pfam PF13439 Glycosyltransferase Family 4 17 179 1.3E-19 T 10-03-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CpPa04_RS01075 fb48445eca199d7bd94c50b8228adcc8 259 Pfam PF00293 NUDIX domain 62 166 6.4E-13 T 10-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 CpPa04_RS01075 fb48445eca199d7bd94c50b8228adcc8 259 SUPERFAMILY SSF55811 61 218 1.9E-24 T 10-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CpPa04_RS01075 fb48445eca199d7bd94c50b8228adcc8 259 Gene3D G3DSA:3.90.79.10 57 225 5.1E-35 T 10-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CpPa04_RS01075 fb48445eca199d7bd94c50b8228adcc8 259 ProSitePatterns PS01293 Nudix CoA signature. 86 106 - T 10-03-2017 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 Reactome: R-HSA-390918 CpPa04_RS00280 113f7106bef1757e18cdde178a1725c4 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 210 8.7E-16 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS00280 113f7106bef1757e18cdde178a1725c4 220 Gene3D G3DSA:1.10.3720.10 22 211 7.9E-20 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS00280 113f7106bef1757e18cdde178a1725c4 220 SUPERFAMILY SSF161098 22 205 1.44E-27 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS08970 883bd8ed998aeab45b0baf929c6d6c45 245 SUPERFAMILY SSF53448 5 231 9.24E-51 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS08970 883bd8ed998aeab45b0baf929c6d6c45 245 Gene3D G3DSA:3.90.550.10 4 233 3.0E-65 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS08970 883bd8ed998aeab45b0baf929c6d6c45 245 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 231 3.9E-63 T 10-03-2017 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CpPa04_RS08970 883bd8ed998aeab45b0baf929c6d6c45 245 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 4 235 26.851 T 10-03-2017 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CpPa04_RS08970 883bd8ed998aeab45b0baf929c6d6c45 245 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 107 114 - T 10-03-2017 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CpPa04_RS08970 883bd8ed998aeab45b0baf929c6d6c45 245 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 8 231 2.4E-61 T 10-03-2017 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CpPa04_RS02470 87202838fac3c1bbad544240bcc09a8a 300 Gene3D G3DSA:3.40.1190.20 3 294 1.4E-84 T 10-03-2017 IPR029056 Ribokinase-like CpPa04_RS02470 87202838fac3c1bbad544240bcc09a8a 300 Hamap MF_01987 Ribokinase [rbsK]. 3 300 23.198 T 10-03-2017 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15 CpPa04_RS02470 87202838fac3c1bbad544240bcc09a8a 300 PRINTS PR00990 Ribokinase signature 7 28 6.2E-30 T 10-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 CpPa04_RS02470 87202838fac3c1bbad544240bcc09a8a 300 PRINTS PR00990 Ribokinase signature 105 118 6.2E-30 T 10-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 CpPa04_RS02470 87202838fac3c1bbad544240bcc09a8a 300 PRINTS PR00990 Ribokinase signature 170 185 6.2E-30 T 10-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 CpPa04_RS02470 87202838fac3c1bbad544240bcc09a8a 300 PRINTS PR00990 Ribokinase signature 216 227 6.2E-30 T 10-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 CpPa04_RS02470 87202838fac3c1bbad544240bcc09a8a 300 PRINTS PR00990 Ribokinase signature 34 53 6.2E-30 T 10-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 CpPa04_RS02470 87202838fac3c1bbad544240bcc09a8a 300 Pfam PF00294 pfkB family carbohydrate kinase 4 292 1.3E-62 T 10-03-2017 IPR011611 Carbohydrate kinase PfkB CpPa04_RS02470 87202838fac3c1bbad544240bcc09a8a 300 SUPERFAMILY SSF53613 4 294 1.71E-73 T 10-03-2017 IPR029056 Ribokinase-like CpPa04_RS02470 87202838fac3c1bbad544240bcc09a8a 300 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 245 258 - T 10-03-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CpPa04_RS08850 1926344cef9a47519893faf0c82bbf06 422 Gene3D G3DSA:3.90.600.10 328 415 3.5E-28 T 10-03-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CpPa04_RS08850 1926344cef9a47519893faf0c82bbf06 422 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 286 293 - T 10-03-2017 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CpPa04_RS08850 1926344cef9a47519893faf0c82bbf06 422 SMART SM01209 103 292 4.4E-104 T 10-03-2017 CpPa04_RS08850 1926344cef9a47519893faf0c82bbf06 422 SUPERFAMILY SSF51246 325 415 1.62E-25 T 10-03-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CpPa04_RS08850 1926344cef9a47519893faf0c82bbf06 422 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 5.2E-31 T 10-03-2017 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CpPa04_RS08850 1926344cef9a47519893faf0c82bbf06 422 Gene3D G3DSA:3.30.470.20 188 325 5.0E-53 T 10-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CpPa04_RS08850 1926344cef9a47519893faf0c82bbf06 422 SUPERFAMILY SSF52440 1 103 4.75E-32 T 10-03-2017 IPR016185 Pre-ATP-grasp domain CpPa04_RS08850 1926344cef9a47519893faf0c82bbf06 422 Gene3D G3DSA:3.40.50.20 3 95 1.2E-31 T 10-03-2017 IPR016185 Pre-ATP-grasp domain CpPa04_RS08850 1926344cef9a47519893faf0c82bbf06 422 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 416 39.583 T 10-03-2017 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CpPa04_RS08850 1926344cef9a47519893faf0c82bbf06 422 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 416 3.1E-141 T 10-03-2017 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CpPa04_RS08850 1926344cef9a47519893faf0c82bbf06 422 SUPERFAMILY SSF56059 104 315 2.05E-50 T 10-03-2017 CpPa04_RS08850 1926344cef9a47519893faf0c82bbf06 422 Gene3D G3DSA:3.30.1490.20 133 187 1.3E-15 T 10-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CpPa04_RS08850 1926344cef9a47519893faf0c82bbf06 422 SMART SM01210 327 416 2.4E-38 T 10-03-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CpPa04_RS08850 1926344cef9a47519893faf0c82bbf06 422 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 292 6.1E-62 T 10-03-2017 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CpPa04_RS08850 1926344cef9a47519893faf0c82bbf06 422 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 328 412 2.4E-25 T 10-03-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CpPa04_RS04365 4e5da9d68379508a6ceef0b0a9436c25 282 Gene3D G3DSA:3.40.50.300 11 255 2.8E-46 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04365 4e5da9d68379508a6ceef0b0a9436c25 282 SMART SM00382 43 266 9.8E-10 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS04365 4e5da9d68379508a6ceef0b0a9436c25 282 SUPERFAMILY SSF52540 12 254 1.51E-46 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04365 4e5da9d68379508a6ceef0b0a9436c25 282 Pfam PF00005 ABC transporter 37 186 1.7E-27 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS04245 2b4f5a4c05e709973cf8f9ad14e02a65 221 SUPERFAMILY SSF46785 11 78 9.46E-7 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS04245 2b4f5a4c05e709973cf8f9ad14e02a65 221 SUPERFAMILY SSF46785 20 189 1.31E-5 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS04245 2b4f5a4c05e709973cf8f9ad14e02a65 221 Gene3D G3DSA:1.10.10.10 24 84 1.1E-6 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS03570 c584ea3b616504737849a991780092dc 624 TIGRFAM TIGR02104 pulA_typeI: pullulanase, type I 12 578 4.4E-201 T 10-03-2017 IPR011840 Pullulanase, type I CpPa04_RS03570 c584ea3b616504737849a991780092dc 624 Gene3D G3DSA:2.60.40.10 15 106 4.2E-21 T 10-03-2017 IPR013783 Immunoglobulin-like fold CpPa04_RS03570 c584ea3b616504737849a991780092dc 624 SUPERFAMILY SSF81296 13 108 7.17E-21 T 10-03-2017 IPR014756 Immunoglobulin E-set CpPa04_RS03570 c584ea3b616504737849a991780092dc 624 Pfam PF00128 Alpha amylase, catalytic domain 165 253 5.8E-8 T 10-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CpPa04_RS03570 c584ea3b616504737849a991780092dc 624 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 16 93 2.3E-13 T 10-03-2017 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 CpPa04_RS03570 c584ea3b616504737849a991780092dc 624 SUPERFAMILY SSF51445 123 532 1.24E-112 T 10-03-2017 IPR017853 Glycoside hydrolase superfamily CpPa04_RS03570 c584ea3b616504737849a991780092dc 624 SMART SM00642 159 519 1.4E-6 T 10-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CpPa04_RS03570 c584ea3b616504737849a991780092dc 624 Gene3D G3DSA:3.20.20.80 122 534 6.5E-88 T 10-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CpPa04_RS05145 0d0b8448f34041cbd06f2eb7dbb76281 418 SUPERFAMILY SSF53335 170 410 8.82E-19 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS05145 0d0b8448f34041cbd06f2eb7dbb76281 418 Pfam PF02353 Mycolic acid cyclopropane synthetase 169 407 1.1E-15 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS05145 0d0b8448f34041cbd06f2eb7dbb76281 418 Gene3D G3DSA:3.40.50.150 168 410 6.2E-27 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS01615 681c4790380281714d1d1e3787391298 127 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 61 98 3.0E-12 T 10-03-2017 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS01615 681c4790380281714d1d1e3787391298 127 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 127 2.4E-46 T 10-03-2017 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS01615 681c4790380281714d1d1e3787391298 127 SUPERFAMILY SSF48300 4 62 3.01E-15 T 10-03-2017 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS01615 681c4790380281714d1d1e3787391298 127 Gene3D G3DSA:3.30.1390.10 54 127 4.1E-31 T 10-03-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CpPa04_RS01615 681c4790380281714d1d1e3787391298 127 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 60 127 5.3E-28 T 10-03-2017 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS01615 681c4790380281714d1d1e3787391298 127 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 52 6.0E-18 T 10-03-2017 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS01615 681c4790380281714d1d1e3787391298 127 SUPERFAMILY SSF54736 55 127 1.69E-22 T 10-03-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CpPa04_RS01615 681c4790380281714d1d1e3787391298 127 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 127 25.138 T 10-03-2017 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS01615 681c4790380281714d1d1e3787391298 127 Gene3D G3DSA:1.20.5.710 3 53 7.2E-20 T 10-03-2017 CpPa04_RS02900 6fb2a90fa4ab0ebec8c1133eec6377cc 394 SUPERFAMILY SSF50494 204 349 5.33E-20 T 10-03-2017 IPR009003 Peptidase S1, PA clan CpPa04_RS02900 6fb2a90fa4ab0ebec8c1133eec6377cc 394 Gene3D G3DSA:2.40.10.10 284 360 3.2E-10 T 10-03-2017 CpPa04_RS02900 6fb2a90fa4ab0ebec8c1133eec6377cc 394 Gene3D G3DSA:2.40.10.10 201 281 2.8E-9 T 10-03-2017 CpPa04_RS03480 1b4728b387d2c912eef03b7900756e41 107 Gene3D G3DSA:3.30.70.900 1 90 3.0E-19 T 10-03-2017 CpPa04_RS03480 1b4728b387d2c912eef03b7900756e41 107 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 75 3.2E-11 T 10-03-2017 IPR007138 Antibiotic biosynthesis monooxygenase domain CpPa04_RS03480 1b4728b387d2c912eef03b7900756e41 107 SUPERFAMILY SSF54909 1 91 1.11E-20 T 10-03-2017 IPR011008 Dimeric alpha-beta barrel CpPa04_RS06075 c63658f3123f80699d1b7e500a8bfcd5 265 Pfam PF01872 RibD C-terminal domain 38 218 2.0E-16 T 10-03-2017 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 CpPa04_RS06075 c63658f3123f80699d1b7e500a8bfcd5 265 Gene3D G3DSA:3.40.430.10 25 259 1.2E-37 T 10-03-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CpPa04_RS06075 c63658f3123f80699d1b7e500a8bfcd5 265 SUPERFAMILY SSF53597 32 256 1.96E-22 T 10-03-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CpPa04_RS06750 426e610f3ac842fd3429c302af25c7a3 728 Gene3D G3DSA:1.10.3210.10 370 487 6.1E-9 T 10-03-2017 IPR006674 HD domain CpPa04_RS06750 426e610f3ac842fd3429c302af25c7a3 728 SUPERFAMILY SSF109604 354 467 4.08E-12 T 10-03-2017 CpPa04_RS06750 426e610f3ac842fd3429c302af25c7a3 728 SMART SM00471 386 519 0.0055 T 10-03-2017 IPR003607 HD/PDEase domain CpPa04_RS06750 426e610f3ac842fd3429c302af25c7a3 728 SUPERFAMILY SSF81593 159 255 5.26E-6 T 10-03-2017 CpPa04_RS06750 426e610f3ac842fd3429c302af25c7a3 728 SUPERFAMILY SSF81301 34 132 5.56E-9 T 10-03-2017 CpPa04_RS06750 426e610f3ac842fd3429c302af25c7a3 728 Pfam PF01966 HD domain 391 472 4.0E-7 T 10-03-2017 IPR006674 HD domain CpPa04_RS06750 426e610f3ac842fd3429c302af25c7a3 728 Gene3D G3DSA:3.30.460.10 15 98 5.8E-5 T 10-03-2017 CpPa04_RS08870 10df0dcafab091a21a1e4f0806448046 237 SUPERFAMILY SSF46894 135 232 2.38E-28 T 10-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CpPa04_RS08870 10df0dcafab091a21a1e4f0806448046 237 SMART SM00862 157 231 7.5E-26 T 10-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CpPa04_RS08870 10df0dcafab091a21a1e4f0806448046 237 Gene3D G3DSA:3.40.50.2300 6 129 5.0E-39 T 10-03-2017 CpPa04_RS08870 10df0dcafab091a21a1e4f0806448046 237 SMART SM00448 9 120 3.6E-43 T 10-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CpPa04_RS08870 10df0dcafab091a21a1e4f0806448046 237 Pfam PF00072 Response regulator receiver domain 11 120 4.1E-30 T 10-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CpPa04_RS08870 10df0dcafab091a21a1e4f0806448046 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 231 3.3E-25 T 10-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CpPa04_RS08870 10df0dcafab091a21a1e4f0806448046 237 Gene3D G3DSA:1.10.10.10 134 234 1.4E-34 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS08870 10df0dcafab091a21a1e4f0806448046 237 SUPERFAMILY SSF52172 7 128 1.99E-40 T 10-03-2017 IPR011006 CheY-like superfamily CpPa04_RS10260 fe8a6287de3d60581cb35f0861809039 302 Pfam PF00005 ABC transporter 25 158 1.3E-14 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS10260 fe8a6287de3d60581cb35f0861809039 302 SUPERFAMILY SSF52540 4 222 1.01E-37 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS10260 fe8a6287de3d60581cb35f0861809039 302 Gene3D G3DSA:3.40.50.300 4 222 7.4E-37 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04115 ab225c9892b839ed80553226cdaef00d 407 TIGRFAM TIGR00131 gal_kin: galactokinase 18 404 4.0E-77 T 10-03-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CpPa04_RS04115 ab225c9892b839ed80553226cdaef00d 407 PRINTS PR00473 Galactokinase signature 127 145 2.3E-18 T 10-03-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CpPa04_RS04115 ab225c9892b839ed80553226cdaef00d 407 PRINTS PR00473 Galactokinase signature 292 306 2.3E-18 T 10-03-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CpPa04_RS04115 ab225c9892b839ed80553226cdaef00d 407 PRINTS PR00473 Galactokinase signature 39 57 2.3E-18 T 10-03-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CpPa04_RS04115 ab225c9892b839ed80553226cdaef00d 407 PRINTS PR00473 Galactokinase signature 105 116 2.3E-18 T 10-03-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CpPa04_RS04115 ab225c9892b839ed80553226cdaef00d 407 PRINTS PR00959 Mevalonate kinase family signature 37 61 3.1E-35 T 10-03-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CpPa04_RS04115 ab225c9892b839ed80553226cdaef00d 407 PRINTS PR00959 Mevalonate kinase family signature 134 156 3.1E-35 T 10-03-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CpPa04_RS04115 ab225c9892b839ed80553226cdaef00d 407 PRINTS PR00959 Mevalonate kinase family signature 352 369 3.1E-35 T 10-03-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CpPa04_RS04115 ab225c9892b839ed80553226cdaef00d 407 PRINTS PR00959 Mevalonate kinase family signature 181 200 3.1E-35 T 10-03-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CpPa04_RS04115 ab225c9892b839ed80553226cdaef00d 407 Pfam PF00288 GHMP kinases N terminal domain 129 200 1.2E-11 T 10-03-2017 IPR006204 GHMP kinase N-terminal domain GO:0005524 CpPa04_RS04115 ab225c9892b839ed80553226cdaef00d 407 Gene3D G3DSA:3.30.230.10 17 230 8.7E-56 T 10-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CpPa04_RS04115 ab225c9892b839ed80553226cdaef00d 407 ProSitePatterns PS00106 Galactokinase signature. 39 50 - T 10-03-2017 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CpPa04_RS04115 ab225c9892b839ed80553226cdaef00d 407 Pfam PF10509 Galactokinase galactose-binding signature 22 70 1.7E-14 T 10-03-2017 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CpPa04_RS04115 ab225c9892b839ed80553226cdaef00d 407 SUPERFAMILY SSF55060 226 405 1.73E-37 T 10-03-2017 IPR013750 GHMP kinase, C-terminal domain CpPa04_RS04115 ab225c9892b839ed80553226cdaef00d 407 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 136 147 - T 10-03-2017 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 CpPa04_RS04115 ab225c9892b839ed80553226cdaef00d 407 SUPERFAMILY SSF54211 12 222 2.2E-46 T 10-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CpPa04_RS04115 ab225c9892b839ed80553226cdaef00d 407 Pfam PF08544 GHMP kinases C terminal 309 380 2.8E-11 T 10-03-2017 IPR013750 GHMP kinase, C-terminal domain CpPa04_RS04115 ab225c9892b839ed80553226cdaef00d 407 PIRSF PIRSF000530 5 407 1.8E-102 T 10-03-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CpPa04_RS04115 ab225c9892b839ed80553226cdaef00d 407 Gene3D G3DSA:3.30.70.890 231 404 1.9E-45 T 10-03-2017 IPR013750 GHMP kinase, C-terminal domain CpPa04_RS08950 2b19afd5ce3a60cd99b764fd68b9bdfa 285 Pfam PF02230 Phospholipase/Carboxylesterase 104 169 5.0E-5 T 10-03-2017 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 CpPa04_RS08950 2b19afd5ce3a60cd99b764fd68b9bdfa 285 Gene3D G3DSA:3.40.50.1820 27 242 2.2E-20 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS08950 2b19afd5ce3a60cd99b764fd68b9bdfa 285 SUPERFAMILY SSF53474 22 175 3.14E-18 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS03880 9a1055d11889ab12ce61ff68f01f181c 246 SMART SM00020 26 206 1.5E-7 T 10-03-2017 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 CpPa04_RS03880 9a1055d11889ab12ce61ff68f01f181c 246 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 163 175 3.9E-9 T 10-03-2017 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 CpPa04_RS03880 9a1055d11889ab12ce61ff68f01f181c 246 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 49 64 3.9E-9 T 10-03-2017 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 CpPa04_RS03880 9a1055d11889ab12ce61ff68f01f181c 246 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 87 101 3.9E-9 T 10-03-2017 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 CpPa04_RS03880 9a1055d11889ab12ce61ff68f01f181c 246 Gene3D G3DSA:2.40.10.10 28 56 8.2E-8 T 10-03-2017 CpPa04_RS03880 9a1055d11889ab12ce61ff68f01f181c 246 Pfam PF00089 Trypsin 33 206 2.1E-20 T 10-03-2017 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 CpPa04_RS03880 9a1055d11889ab12ce61ff68f01f181c 246 Gene3D G3DSA:2.40.10.10 57 209 9.4E-20 T 10-03-2017 CpPa04_RS03880 9a1055d11889ab12ce61ff68f01f181c 246 SUPERFAMILY SSF50494 35 209 3.99E-32 T 10-03-2017 IPR009003 Peptidase S1, PA clan CpPa04_RS05675 7a150afac5345e9dba49e08135606a3b 213 Gene3D G3DSA:2.40.30.20 5 103 3.1E-32 T 10-03-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 CpPa04_RS05675 7a150afac5345e9dba49e08135606a3b 213 Gene3D G3DSA:2.40.30.20 104 198 1.6E-28 T 10-03-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 CpPa04_RS05675 7a150afac5345e9dba49e08135606a3b 213 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 198 4.9E-65 T 10-03-2017 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CpPa04_RS05675 7a150afac5345e9dba49e08135606a3b 213 SUPERFAMILY SSF63380 92 199 1.7E-30 T 10-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CpPa04_RS05675 7a150afac5345e9dba49e08135606a3b 213 PIRSF PIRSF000498 1 207 6.3E-70 T 10-03-2017 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CpPa04_RS05675 7a150afac5345e9dba49e08135606a3b 213 Pfam PF00677 Lumazine binding domain 99 187 4.7E-21 T 10-03-2017 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CpPa04_RS05675 7a150afac5345e9dba49e08135606a3b 213 Pfam PF00677 Lumazine binding domain 3 86 1.4E-20 T 10-03-2017 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CpPa04_RS05675 7a150afac5345e9dba49e08135606a3b 213 SUPERFAMILY SSF63380 1 88 1.62E-24 T 10-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CpPa04_RS10690 7721cc6bee0cf03aa55c5675195337bb 209 PIRSF PIRSF003078 3 207 8.2E-46 T 10-03-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CpPa04_RS10690 7721cc6bee0cf03aa55c5675195337bb 209 Gene3D G3DSA:3.40.50.150 16 208 3.7E-56 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS10690 7721cc6bee0cf03aa55c5675195337bb 209 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 8 181 23.4 T 10-03-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CpPa04_RS10690 7721cc6bee0cf03aa55c5675195337bb 209 Pfam PF02527 rRNA small subunit methyltransferase G 17 187 2.5E-49 T 10-03-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CpPa04_RS10690 7721cc6bee0cf03aa55c5675195337bb 209 SUPERFAMILY SSF53335 15 198 1.21E-29 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS10690 7721cc6bee0cf03aa55c5675195337bb 209 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 21 187 1.5E-40 T 10-03-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CpPa04_RS05125 d3e77673335f5c8ff3b7f31c0e67f6e4 166 Gene3D G3DSA:3.10.129.10 22 153 2.1E-32 T 10-03-2017 IPR029069 HotDog domain CpPa04_RS05125 d3e77673335f5c8ff3b7f31c0e67f6e4 166 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 35 145 1.1E-17 T 10-03-2017 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-75105 CpPa04_RS05125 d3e77673335f5c8ff3b7f31c0e67f6e4 166 Pfam PF03061 Thioesterase superfamily 65 133 1.1E-9 T 10-03-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 CpPa04_RS05125 d3e77673335f5c8ff3b7f31c0e67f6e4 166 SUPERFAMILY SSF54637 30 143 1.41E-23 T 10-03-2017 IPR029069 HotDog domain CpPa04_RS10440 47722af268c532c256209e5e576cabc3 199 SMART SM00448 2 110 4.0E-28 T 10-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CpPa04_RS10440 47722af268c532c256209e5e576cabc3 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 169 5.5E-13 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS10440 47722af268c532c256209e5e576cabc3 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 181 5.5E-13 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS10440 47722af268c532c256209e5e576cabc3 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 139 153 5.5E-13 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS10440 47722af268c532c256209e5e576cabc3 199 SUPERFAMILY SSF52172 1 129 2.56E-28 T 10-03-2017 IPR011006 CheY-like superfamily CpPa04_RS10440 47722af268c532c256209e5e576cabc3 199 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 192 6.3E-19 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS10440 47722af268c532c256209e5e576cabc3 199 Gene3D G3DSA:1.10.10.10 141 199 3.0E-23 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS10440 47722af268c532c256209e5e576cabc3 199 SMART SM00421 136 193 1.0E-18 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS10440 47722af268c532c256209e5e576cabc3 199 SUPERFAMILY SSF46894 128 199 1.16E-19 T 10-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CpPa04_RS10440 47722af268c532c256209e5e576cabc3 199 Gene3D G3DSA:3.40.50.2300 1 140 1.1E-31 T 10-03-2017 CpPa04_RS10440 47722af268c532c256209e5e576cabc3 199 Pfam PF00072 Response regulator receiver domain 4 110 2.8E-24 T 10-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CpPa04_RS08955 8aa794416080fe77a6cc2e2d3bb62cb5 313 SUPERFAMILY SSF55315 65 144 1.41E-16 T 10-03-2017 IPR029064 50S ribosomal protein L30e-like CpPa04_RS08955 8aa794416080fe77a6cc2e2d3bb62cb5 313 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 71 146 3.6E-19 T 10-03-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 CpPa04_RS08955 8aa794416080fe77a6cc2e2d3bb62cb5 313 SUPERFAMILY SSF75217 135 311 6.02E-45 T 10-03-2017 IPR029028 Alpha/beta knot methyltransferases CpPa04_RS08955 8aa794416080fe77a6cc2e2d3bb62cb5 313 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 70 310 7.5E-64 T 10-03-2017 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 CpPa04_RS08955 8aa794416080fe77a6cc2e2d3bb62cb5 313 Gene3D G3DSA:3.30.1330.30 63 143 6.5E-20 T 10-03-2017 IPR029064 50S ribosomal protein L30e-like CpPa04_RS08955 8aa794416080fe77a6cc2e2d3bb62cb5 313 Gene3D G3DSA:3.40.1280.10 157 311 4.8E-51 T 10-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CpPa04_RS08955 8aa794416080fe77a6cc2e2d3bb62cb5 313 SMART SM00967 71 147 7.0E-18 T 10-03-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 CpPa04_RS08955 8aa794416080fe77a6cc2e2d3bb62cb5 313 Pfam PF00588 SpoU rRNA Methylase family 164 303 1.5E-36 T 10-03-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CpPa04_RS07435 0cb7c44f4ab30affd9049b91576fc610 62 Pfam PF12161 HsdM N-terminal domain 8 52 1.3E-11 T 10-03-2017 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CpPa04_RS07435 0cb7c44f4ab30affd9049b91576fc610 62 SUPERFAMILY SSF53335 7 47 1.33E-7 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS05960 2d90903897d96d266ec5cc7694d46bd2 365 SUPERFAMILY SSF46785 281 354 7.08E-22 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS05960 2d90903897d96d266ec5cc7694d46bd2 365 SMART SM00382 75 209 2.2E-12 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS05960 2d90903897d96d266ec5cc7694d46bd2 365 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 29 259 5.4E-109 T 10-03-2017 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 CpPa04_RS05960 2d90903897d96d266ec5cc7694d46bd2 365 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 48 350 8.0E-136 T 10-03-2017 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CpPa04_RS05960 2d90903897d96d266ec5cc7694d46bd2 365 Gene3D G3DSA:1.10.8.60 207 279 5.6E-31 T 10-03-2017 CpPa04_RS05960 2d90903897d96d266ec5cc7694d46bd2 365 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 365 156.044 T 10-03-2017 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CpPa04_RS05960 2d90903897d96d266ec5cc7694d46bd2 365 Gene3D G3DSA:3.40.50.300 44 196 2.9E-28 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05960 2d90903897d96d266ec5cc7694d46bd2 365 SUPERFAMILY SSF52540 44 272 2.37E-48 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05960 2d90903897d96d266ec5cc7694d46bd2 365 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 277 350 3.2E-28 T 10-03-2017 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CpPa04_RS05960 2d90903897d96d266ec5cc7694d46bd2 365 Gene3D G3DSA:1.10.10.10 281 351 1.6E-29 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS05960 2d90903897d96d266ec5cc7694d46bd2 365 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 274 351 1.0E-25 T 10-03-2017 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CpPa04_RS08680 e133d728521b8afd1368cf20fdc6b83e 327 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 3 212 1.9E-67 T 10-03-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CpPa04_RS08680 e133d728521b8afd1368cf20fdc6b83e 327 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 3 318 7.9E-107 T 10-03-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CpPa04_RS08680 e133d728521b8afd1368cf20fdc6b83e 327 PIRSF PIRSF000267 1 327 4.6E-109 T 10-03-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CpPa04_RS02420 ce617b1f3ddc11e68034a783a1e35b0d 473 SUPERFAMILY SSF51905 7 343 2.52E-51 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS02420 ce617b1f3ddc11e68034a783a1e35b0d 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.6E-32 T 10-03-2017 CpPa04_RS02420 ce617b1f3ddc11e68034a783a1e35b0d 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 3.6E-32 T 10-03-2017 CpPa04_RS02420 ce617b1f3ddc11e68034a783a1e35b0d 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 185 203 3.6E-32 T 10-03-2017 CpPa04_RS02420 ce617b1f3ddc11e68034a783a1e35b0d 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 299 321 3.6E-32 T 10-03-2017 CpPa04_RS02420 ce617b1f3ddc11e68034a783a1e35b0d 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 286 3.6E-32 T 10-03-2017 CpPa04_RS02420 ce617b1f3ddc11e68034a783a1e35b0d 473 Gene3D G3DSA:3.50.50.60 8 149 2.4E-28 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS02420 ce617b1f3ddc11e68034a783a1e35b0d 473 PIRSF PIRSF000350 3 470 6.7E-81 T 10-03-2017 CpPa04_RS02420 ce617b1f3ddc11e68034a783a1e35b0d 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 334 1.0E-58 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS02420 ce617b1f3ddc11e68034a783a1e35b0d 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 314 321 1.6E-48 T 10-03-2017 CpPa04_RS02420 ce617b1f3ddc11e68034a783a1e35b0d 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 185 210 1.6E-48 T 10-03-2017 CpPa04_RS02420 ce617b1f3ddc11e68034a783a1e35b0d 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 350 371 1.6E-48 T 10-03-2017 CpPa04_RS02420 ce617b1f3ddc11e68034a783a1e35b0d 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 158 1.6E-48 T 10-03-2017 CpPa04_RS02420 ce617b1f3ddc11e68034a783a1e35b0d 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 415 430 1.6E-48 T 10-03-2017 CpPa04_RS02420 ce617b1f3ddc11e68034a783a1e35b0d 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 1.6E-48 T 10-03-2017 CpPa04_RS02420 ce617b1f3ddc11e68034a783a1e35b0d 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 437 457 1.6E-48 T 10-03-2017 CpPa04_RS02420 ce617b1f3ddc11e68034a783a1e35b0d 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 285 1.6E-48 T 10-03-2017 CpPa04_RS02420 ce617b1f3ddc11e68034a783a1e35b0d 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.6E-48 T 10-03-2017 CpPa04_RS02420 ce617b1f3ddc11e68034a783a1e35b0d 473 SUPERFAMILY SSF55424 353 469 4.81E-27 T 10-03-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CpPa04_RS02420 ce617b1f3ddc11e68034a783a1e35b0d 473 Gene3D G3DSA:3.30.390.30 350 466 3.8E-30 T 10-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CpPa04_RS02420 ce617b1f3ddc11e68034a783a1e35b0d 473 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 354 462 8.7E-24 T 10-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CpPa04_RS02420 ce617b1f3ddc11e68034a783a1e35b0d 473 Gene3D G3DSA:3.50.50.60 150 343 1.5E-49 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS07155 da388b0f0948a527021eb9a8418d0509 393 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 268 280 - T 10-03-2017 IPR000092 Polyprenyl synthetase GO:0008299 CpPa04_RS07155 da388b0f0948a527021eb9a8418d0509 393 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 124 138 - T 10-03-2017 IPR000092 Polyprenyl synthetase GO:0008299 CpPa04_RS07155 da388b0f0948a527021eb9a8418d0509 393 Pfam PF00348 Polyprenyl synthetase 74 325 4.6E-48 T 10-03-2017 IPR000092 Polyprenyl synthetase GO:0008299 CpPa04_RS07155 da388b0f0948a527021eb9a8418d0509 393 Gene3D G3DSA:1.10.600.10 47 392 2.2E-81 T 10-03-2017 IPR008949 Isoprenoid synthase domain CpPa04_RS07155 da388b0f0948a527021eb9a8418d0509 393 SUPERFAMILY SSF48576 48 392 5.94E-70 T 10-03-2017 IPR008949 Isoprenoid synthase domain CpPa04_RS04560 2e2ad2ae4d992737a4a0dd59ca933857 203 SMART SM00479 30 202 3.2E-13 T 10-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III CpPa04_RS04560 2e2ad2ae4d992737a4a0dd59ca933857 203 Gene3D G3DSA:3.30.420.10 25 201 4.3E-39 T 10-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CpPa04_RS04560 2e2ad2ae4d992737a4a0dd59ca933857 203 SUPERFAMILY SSF53098 25 201 3.8E-33 T 10-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CpPa04_RS04560 2e2ad2ae4d992737a4a0dd59ca933857 203 Pfam PF00929 Exonuclease 33 198 2.4E-18 T 10-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III CpPa04_RS04395 1c8ed424367bac84f79f2f8079daea43 289 Pfam PF08241 Methyltransferase domain 92 193 2.2E-4 T 10-03-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CpPa04_RS04395 1c8ed424367bac84f79f2f8079daea43 289 SUPERFAMILY SSF53335 56 261 2.79E-32 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS04395 1c8ed424367bac84f79f2f8079daea43 289 Gene3D G3DSA:3.40.50.150 28 280 1.0E-66 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS07410 41e4002386389044856e8f8990a302a7 543 SUPERFAMILY SSF52540 5 94 8.76E-23 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07410 41e4002386389044856e8f8990a302a7 543 SUPERFAMILY SSF52540 182 350 8.76E-23 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07410 41e4002386389044856e8f8990a302a7 543 Gene3D G3DSA:3.40.50.300 5 153 3.6E-28 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07410 41e4002386389044856e8f8990a302a7 543 Gene3D G3DSA:3.40.50.300 204 344 3.6E-28 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07410 41e4002386389044856e8f8990a302a7 543 Pfam PF13175 AAA ATPase domain 5 335 2.2E-17 T 10-03-2017 CpPa04_RS09975 9033ae8e71f637615e33a639626cd3b9 168 SUPERFAMILY SSF48317 16 162 2.35E-39 T 10-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CpPa04_RS09975 9033ae8e71f637615e33a639626cd3b9 168 Gene3D G3DSA:1.20.144.10 15 163 4.8E-34 T 10-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CpPa04_RS09975 9033ae8e71f637615e33a639626cd3b9 168 SMART SM00014 51 156 4.5E-23 T 10-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CpPa04_RS09975 9033ae8e71f637615e33a639626cd3b9 168 Pfam PF01569 PAP2 superfamily 56 161 1.0E-23 T 10-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CpPa04_RS10030 0ac31fb8a8cbe40fd7c39b6ab751b43a 419 PRINTS PR00981 Seryl-tRNA synthetase signature 271 284 2.9E-30 T 10-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CpPa04_RS10030 0ac31fb8a8cbe40fd7c39b6ab751b43a 419 PRINTS PR00981 Seryl-tRNA synthetase signature 346 362 2.9E-30 T 10-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CpPa04_RS10030 0ac31fb8a8cbe40fd7c39b6ab751b43a 419 PRINTS PR00981 Seryl-tRNA synthetase signature 259 271 2.9E-30 T 10-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CpPa04_RS10030 0ac31fb8a8cbe40fd7c39b6ab751b43a 419 PRINTS PR00981 Seryl-tRNA synthetase signature 311 324 2.9E-30 T 10-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CpPa04_RS10030 0ac31fb8a8cbe40fd7c39b6ab751b43a 419 PRINTS PR00981 Seryl-tRNA synthetase signature 328 344 2.9E-30 T 10-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CpPa04_RS10030 0ac31fb8a8cbe40fd7c39b6ab751b43a 419 SUPERFAMILY SSF46589 2 108 4.76E-22 T 10-03-2017 IPR010978 tRNA-binding arm GO:0000166 CpPa04_RS10030 0ac31fb8a8cbe40fd7c39b6ab751b43a 419 TIGRFAM TIGR00414 serS: serine--tRNA ligase 2 410 4.8E-130 T 10-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CpPa04_RS10030 0ac31fb8a8cbe40fd7c39b6ab751b43a 419 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 218 393 4.7E-28 T 10-03-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS10030 0ac31fb8a8cbe40fd7c39b6ab751b43a 419 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 105 1.6E-24 T 10-03-2017 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CpPa04_RS10030 0ac31fb8a8cbe40fd7c39b6ab751b43a 419 Gene3D G3DSA:1.10.287.40 2 100 1.1E-28 T 10-03-2017 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CpPa04_RS10030 0ac31fb8a8cbe40fd7c39b6ab751b43a 419 SUPERFAMILY SSF55681 115 418 7.9E-88 T 10-03-2017 CpPa04_RS10030 0ac31fb8a8cbe40fd7c39b6ab751b43a 419 PIRSF PIRSF001529 1 418 1.5E-135 T 10-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CpPa04_RS10030 0ac31fb8a8cbe40fd7c39b6ab751b43a 419 Gene3D G3DSA:3.30.930.10 107 413 1.1E-117 T 10-03-2017 CpPa04_RS10030 0ac31fb8a8cbe40fd7c39b6ab751b43a 419 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 415 37.457 T 10-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CpPa04_RS00550 57317c30a8f3d976c1caad75c221df31 300 Gene3D G3DSA:3.90.550.10 11 223 6.1E-17 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS00550 57317c30a8f3d976c1caad75c221df31 300 SUPERFAMILY SSF53448 8 277 6.57E-33 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS00550 57317c30a8f3d976c1caad75c221df31 300 Pfam PF00535 Glycosyl transferase family 2 11 154 3.4E-12 T 10-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CpPa04_RS01515 583e0c978ffcd7b367bdd8eb5193f835 345 Gene3D G3DSA:3.30.390.10 18 107 1.8E-43 T 10-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CpPa04_RS01515 583e0c978ffcd7b367bdd8eb5193f835 345 SUPERFAMILY SSF51604 83 309 1.57E-40 T 10-03-2017 IPR029065 Enolase C-terminal domain-like CpPa04_RS01515 583e0c978ffcd7b367bdd8eb5193f835 345 SMART SM00922 97 189 2.7E-18 T 10-03-2017 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CpPa04_RS01515 583e0c978ffcd7b367bdd8eb5193f835 345 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 15 311 22.282 T 10-03-2017 IPR010196 o-succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CpPa04_RS01515 583e0c978ffcd7b367bdd8eb5193f835 345 Pfam PF13378 Enolase C-terminal domain-like 108 307 3.6E-29 T 10-03-2017 IPR029065 Enolase C-terminal domain-like CpPa04_RS01515 583e0c978ffcd7b367bdd8eb5193f835 345 Gene3D G3DSA:3.20.20.120 108 339 6.5E-50 T 10-03-2017 IPR029065 Enolase C-terminal domain-like CpPa04_RS05320 d949d42e28a891be90ea0332771a03ee 281 SUPERFAMILY SSF53850 1 206 1.69E-62 T 10-03-2017 CpPa04_RS05320 d949d42e28a891be90ea0332771a03ee 281 Pfam PF08029 HisG, C-terminal domain 206 277 5.0E-25 T 10-03-2017 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CpPa04_RS05320 d949d42e28a891be90ea0332771a03ee 281 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 188 277 5.5E-28 T 10-03-2017 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CpPa04_RS05320 d949d42e28a891be90ea0332771a03ee 281 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 182 1.3E-54 T 10-03-2017 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CpPa04_RS05320 d949d42e28a891be90ea0332771a03ee 281 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 141 162 - T 10-03-2017 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 CpPa04_RS05320 d949d42e28a891be90ea0332771a03ee 281 SUPERFAMILY SSF54913 208 279 1.33E-19 T 10-03-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta CpPa04_RS05320 d949d42e28a891be90ea0332771a03ee 281 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 1 281 31.824 T 10-03-2017 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 CpPa04_RS05320 d949d42e28a891be90ea0332771a03ee 281 Pfam PF01634 ATP phosphoribosyltransferase 49 201 3.4E-42 T 10-03-2017 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CpPa04_RS05320 d949d42e28a891be90ea0332771a03ee 281 Gene3D G3DSA:3.30.70.120 209 274 5.9E-25 T 10-03-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CpPa04_RS05320 d949d42e28a891be90ea0332771a03ee 281 Gene3D G3DSA:3.40.190.10 1 106 2.6E-35 T 10-03-2017 CpPa04_RS05320 d949d42e28a891be90ea0332771a03ee 281 Gene3D G3DSA:3.40.190.10 107 171 1.4E-27 T 10-03-2017 CpPa04_RS03770 7db21e46cbd2c779d112dad71b24ea8b 413 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 14 404 1.6E-115 T 10-03-2017 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CpPa04_RS03770 7db21e46cbd2c779d112dad71b24ea8b 413 Pfam PF02601 Exonuclease VII, large subunit 130 348 1.1E-60 T 10-03-2017 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 CpPa04_RS03770 7db21e46cbd2c779d112dad71b24ea8b 413 Pfam PF13742 OB-fold nucleic acid binding domain 13 107 3.6E-18 T 10-03-2017 IPR025824 OB-fold nucleic acid binding domain GO:0003676 CpPa04_RS03770 7db21e46cbd2c779d112dad71b24ea8b 413 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 9 407 23.565 T 10-03-2017 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CpPa04_RS07310 a9c12d41eb09f92e5a9a499fda94377e 153 Gene3D G3DSA:3.10.180.10 16 141 1.5E-14 T 10-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CpPa04_RS07310 a9c12d41eb09f92e5a9a499fda94377e 153 SUPERFAMILY SSF54593 15 142 1.3E-14 T 10-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CpPa04_RS05065 aabba84f7201c64bb2adba5a11742711 395 SUPERFAMILY SSF53474 182 251 1.5E-43 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS05065 aabba84f7201c64bb2adba5a11742711 395 SUPERFAMILY SSF53474 4 138 1.5E-43 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS05065 aabba84f7201c64bb2adba5a11742711 395 Pfam PF02566 OsmC-like protein 299 377 1.1E-6 T 10-03-2017 IPR003718 OsmC/Ohr family CpPa04_RS05065 aabba84f7201c64bb2adba5a11742711 395 Gene3D G3DSA:3.40.50.1820 180 236 4.9E-42 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS05065 aabba84f7201c64bb2adba5a11742711 395 Gene3D G3DSA:3.40.50.1820 5 136 4.9E-42 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS05065 aabba84f7201c64bb2adba5a11742711 395 Pfam PF12146 Serine aminopeptidase, S33 47 140 6.3E-12 T 10-03-2017 IPR022742 Serine aminopeptidase, S33 CpPa04_RS05065 aabba84f7201c64bb2adba5a11742711 395 Gene3D G3DSA:3.30.300.20 237 377 5.3E-18 T 10-03-2017 IPR015946 K homology domain-like, alpha/beta CpPa04_RS05065 aabba84f7201c64bb2adba5a11742711 395 SUPERFAMILY SSF82784 273 393 8.64E-16 T 10-03-2017 IPR003718 OsmC/Ohr family CpPa04_RS06430 e31852ab98e6bbf2dd7cd391e600b24b 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 115 131 2.1E-29 T 10-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CpPa04_RS06430 e31852ab98e6bbf2dd7cd391e600b24b 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 47 68 2.1E-29 T 10-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CpPa04_RS06430 e31852ab98e6bbf2dd7cd391e600b24b 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 140 157 2.1E-29 T 10-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CpPa04_RS06430 e31852ab98e6bbf2dd7cd391e600b24b 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 83 101 2.1E-29 T 10-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CpPa04_RS06430 e31852ab98e6bbf2dd7cd391e600b24b 301 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 145 175 - T 10-03-2017 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CpPa04_RS06430 e31852ab98e6bbf2dd7cd391e600b24b 301 Gene3D G3DSA:3.20.20.70 14 301 5.1E-103 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS06430 e31852ab98e6bbf2dd7cd391e600b24b 301 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 17 293 1.7E-78 T 10-03-2017 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CpPa04_RS06430 e31852ab98e6bbf2dd7cd391e600b24b 301 Pfam PF00701 Dihydrodipicolinate synthetase family 14 294 9.7E-81 T 10-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CpPa04_RS06430 e31852ab98e6bbf2dd7cd391e600b24b 301 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 13 297 55.193 T 10-03-2017 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CpPa04_RS06430 e31852ab98e6bbf2dd7cd391e600b24b 301 SMART SM01130 13 299 4.1E-115 T 10-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CpPa04_RS06430 e31852ab98e6bbf2dd7cd391e600b24b 301 SUPERFAMILY SSF51569 14 300 3.87E-90 T 10-03-2017 CpPa04_RS06430 e31852ab98e6bbf2dd7cd391e600b24b 301 PIRSF PIRSF001365 12 301 5.0E-79 T 10-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CpPa04_RS05120 a771d309c7907e41e24a614515a7239d 485 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 9 476 1.8E-207 T 10-03-2017 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CpPa04_RS05120 a771d309c7907e41e24a614515a7239d 485 PIRSF PIRSF000109 2 484 1.3E-202 T 10-03-2017 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CpPa04_RS05120 a771d309c7907e41e24a614515a7239d 485 Gene3D G3DSA:1.10.1040.10 185 442 2.5E-104 T 10-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CpPa04_RS05120 a771d309c7907e41e24a614515a7239d 485 SUPERFAMILY SSF48179 181 479 1.43E-118 T 10-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CpPa04_RS05120 a771d309c7907e41e24a614515a7239d 485 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 258 270 - T 10-03-2017 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CpPa04_RS05120 a771d309c7907e41e24a614515a7239d 485 SMART SM01350 183 476 4.2E-201 T 10-03-2017 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CpPa04_RS05120 a771d309c7907e41e24a614515a7239d 485 Gene3D G3DSA:3.40.50.720 3 184 4.0E-60 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS05120 a771d309c7907e41e24a614515a7239d 485 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 254 281 2.3E-80 T 10-03-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CpPa04_RS05120 a771d309c7907e41e24a614515a7239d 485 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 124 149 2.3E-80 T 10-03-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CpPa04_RS05120 a771d309c7907e41e24a614515a7239d 485 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 365 387 2.3E-80 T 10-03-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CpPa04_RS05120 a771d309c7907e41e24a614515a7239d 485 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 8 31 2.3E-80 T 10-03-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CpPa04_RS05120 a771d309c7907e41e24a614515a7239d 485 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 71 100 2.3E-80 T 10-03-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CpPa04_RS05120 a771d309c7907e41e24a614515a7239d 485 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 172 200 2.3E-80 T 10-03-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CpPa04_RS05120 a771d309c7907e41e24a614515a7239d 485 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 183 475 9.7E-123 T 10-03-2017 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CpPa04_RS05120 a771d309c7907e41e24a614515a7239d 485 Gene3D G3DSA:1.20.5.320 444 483 1.8E-21 T 10-03-2017 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CpPa04_RS05120 a771d309c7907e41e24a614515a7239d 485 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 9 178 5.8E-52 T 10-03-2017 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CpPa04_RS05120 a771d309c7907e41e24a614515a7239d 485 SUPERFAMILY SSF51735 8 181 6.11E-53 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS07400 e8144818b25df24a3566c92d23bad12c 656 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 118 130 8.0E-15 T 10-03-2017 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CpPa04_RS07400 e8144818b25df24a3566c92d23bad12c 656 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 180 199 8.0E-15 T 10-03-2017 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CpPa04_RS07400 e8144818b25df24a3566c92d23bad12c 656 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 430 444 8.0E-15 T 10-03-2017 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CpPa04_RS07400 e8144818b25df24a3566c92d23bad12c 656 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 407 429 8.0E-15 T 10-03-2017 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CpPa04_RS07400 e8144818b25df24a3566c92d23bad12c 656 Gene3D G3DSA:3.40.50.150 94 133 1.3E-55 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS07400 e8144818b25df24a3566c92d23bad12c 656 Gene3D G3DSA:3.40.50.150 364 520 1.3E-55 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS07400 e8144818b25df24a3566c92d23bad12c 656 Gene3D G3DSA:3.40.50.150 167 280 1.3E-55 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS07400 e8144818b25df24a3566c92d23bad12c 656 PIRSF PIRSF015855 1 651 3.0E-136 T 10-03-2017 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CpPa04_RS07400 e8144818b25df24a3566c92d23bad12c 656 Pfam PF01555 DNA methylase 118 450 4.3E-37 T 10-03-2017 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CpPa04_RS07400 e8144818b25df24a3566c92d23bad12c 656 SUPERFAMILY SSF53335 87 139 3.16E-49 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS07400 e8144818b25df24a3566c92d23bad12c 656 SUPERFAMILY SSF53335 380 466 3.16E-49 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS07400 e8144818b25df24a3566c92d23bad12c 656 SUPERFAMILY SSF53335 168 305 3.16E-49 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS02750 44f4e1345506c61b0f35b40369f4bfb9 359 SUPERFAMILY SSF81324 38 165 1.83E-23 T 10-03-2017 CpPa04_RS02750 44f4e1345506c61b0f35b40369f4bfb9 359 Pfam PF07885 Ion channel 51 128 4.5E-15 T 10-03-2017 IPR013099 Potassium channel domain CpPa04_RS02750 44f4e1345506c61b0f35b40369f4bfb9 359 SUPERFAMILY SSF51735 144 288 4.96E-26 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS02750 44f4e1345506c61b0f35b40369f4bfb9 359 Pfam PF02254 TrkA-N domain 149 265 3.7E-25 T 10-03-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CpPa04_RS02750 44f4e1345506c61b0f35b40369f4bfb9 359 Gene3D G3DSA:1.10.287.70 49 135 1.8E-14 T 10-03-2017 CpPa04_RS02750 44f4e1345506c61b0f35b40369f4bfb9 359 Gene3D G3DSA:3.40.50.720 138 264 1.2E-31 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS07205 e8b931924b30559dc2e65ef399c08583 334 SUPERFAMILY SSF54001 226 334 5.4E-36 T 10-03-2017 CpPa04_RS07205 e8b931924b30559dc2e65ef399c08583 334 Gene3D G3DSA:3.90.1720.10 225 334 2.4E-37 T 10-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain CpPa04_RS07205 e8b931924b30559dc2e65ef399c08583 334 Pfam PF00877 NlpC/P60 family 235 319 5.1E-22 T 10-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain CpPa04_RS10450 c2c42738783104aaced15690184c8e0f 259 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 247 2.0E-80 T 10-03-2017 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 CpPa04_RS10450 c2c42738783104aaced15690184c8e0f 259 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 118 136 - T 10-03-2017 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 CpPa04_RS10450 c2c42738783104aaced15690184c8e0f 259 SUPERFAMILY SSF100950 1 249 1.33E-89 T 10-03-2017 CpPa04_RS10450 c2c42738783104aaced15690184c8e0f 259 Gene3D G3DSA:3.40.50.1360 1 254 7.9E-92 T 10-03-2017 CpPa04_RS10450 c2c42738783104aaced15690184c8e0f 259 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 27 226 2.7E-24 T 10-03-2017 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 CpPa04_RS10450 c2c42738783104aaced15690184c8e0f 259 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 240 38.497 T 10-03-2017 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 CpPa04_RS00285 11c5b400a16cb09843437bb5fdb75129 212 SUPERFAMILY SSF161098 8 195 6.93E-27 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS00285 11c5b400a16cb09843437bb5fdb75129 212 Gene3D G3DSA:1.10.3720.10 8 202 2.5E-19 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS00285 11c5b400a16cb09843437bb5fdb75129 212 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 206 4.4E-17 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS08760 9be02602f8f572abfcb09dfcdd572852 376 SUPERFAMILY SSF103025 39 277 9.89E-48 T 10-03-2017 CpPa04_RS08760 9be02602f8f572abfcb09dfcdd572852 376 Pfam PF01571 Aminomethyltransferase folate-binding domain 40 167 3.1E-14 T 10-03-2017 IPR006222 Glycine cleavage T-protein-like, N-terminal CpPa04_RS08760 9be02602f8f572abfcb09dfcdd572852 376 Gene3D G3DSA:3.30.70.1400 65 158 3.8E-10 T 10-03-2017 CpPa04_RS08760 9be02602f8f572abfcb09dfcdd572852 376 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 223 286 2.6E-17 T 10-03-2017 IPR017703 YgfZ/GcvT conserved site CpPa04_RS08760 9be02602f8f572abfcb09dfcdd572852 376 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 262 337 1.5E-6 T 10-03-2017 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CpPa04_RS08475 38a7724f2ab2c0ed22e5795005373914 719 PRINTS PR01183 Ribonucleotide reductase large chain signature 387 398 4.7E-30 T 10-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CpPa04_RS08475 38a7724f2ab2c0ed22e5795005373914 719 PRINTS PR01183 Ribonucleotide reductase large chain signature 498 521 4.7E-30 T 10-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CpPa04_RS08475 38a7724f2ab2c0ed22e5795005373914 719 PRINTS PR01183 Ribonucleotide reductase large chain signature 470 492 4.7E-30 T 10-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CpPa04_RS08475 38a7724f2ab2c0ed22e5795005373914 719 PRINTS PR01183 Ribonucleotide reductase large chain signature 582 609 4.7E-30 T 10-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CpPa04_RS08475 38a7724f2ab2c0ed22e5795005373914 719 PRINTS PR01183 Ribonucleotide reductase large chain signature 256 275 4.7E-30 T 10-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CpPa04_RS08475 38a7724f2ab2c0ed22e5795005373914 719 PRINTS PR01183 Ribonucleotide reductase large chain signature 431 454 4.7E-30 T 10-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CpPa04_RS08475 38a7724f2ab2c0ed22e5795005373914 719 Pfam PF08343 Ribonucleotide reductase N-terminal 21 102 5.7E-32 T 10-03-2017 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CpPa04_RS08475 38a7724f2ab2c0ed22e5795005373914 719 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 20 719 0.0 T 10-03-2017 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CpPa04_RS08475 38a7724f2ab2c0ed22e5795005373914 719 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 105 176 2.3E-10 T 10-03-2017 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CpPa04_RS08475 38a7724f2ab2c0ed22e5795005373914 719 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 108 701 2.4E-156 T 10-03-2017 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CpPa04_RS08475 38a7724f2ab2c0ed22e5795005373914 719 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 571 593 - T 10-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CpPa04_RS08475 38a7724f2ab2c0ed22e5795005373914 719 SUPERFAMILY SSF48168 20 179 3.14E-58 T 10-03-2017 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CpPa04_RS08475 38a7724f2ab2c0ed22e5795005373914 719 Pfam PF02867 Ribonucleotide reductase, barrel domain 181 698 2.4E-139 T 10-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CpPa04_RS08475 38a7724f2ab2c0ed22e5795005373914 719 SUPERFAMILY SSF51998 180 703 2.44E-181 T 10-03-2017 CpPa04_RS08475 38a7724f2ab2c0ed22e5795005373914 719 Gene3D G3DSA:3.20.70.20 355 518 7.8E-51 T 10-03-2017 CpPa04_RS08475 38a7724f2ab2c0ed22e5795005373914 719 Gene3D G3DSA:3.20.70.20 113 302 7.8E-51 T 10-03-2017 CpPa04_RS08475 38a7724f2ab2c0ed22e5795005373914 719 Gene3D G3DSA:3.20.70.20 582 696 7.8E-51 T 10-03-2017 CpPa04_RS09750 3197522c8dd1b41bd3b34ee4a9ae0562 239 PIRSF PIRSF009467 7 239 5.0E-58 T 10-03-2017 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 CpPa04_RS09750 3197522c8dd1b41bd3b34ee4a9ae0562 239 Hamap MF_01385 Urease accessory protein UreF [ureF]. 10 239 23.869 T 10-03-2017 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 CpPa04_RS09750 3197522c8dd1b41bd3b34ee4a9ae0562 239 Pfam PF01730 UreF 42 195 3.3E-24 T 10-03-2017 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 CpPa04_RS01030 44d01de732504c36044d8af4f641ca20 153 Gene3D G3DSA:1.10.10.410 93 153 2.4E-19 T 10-03-2017 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CpPa04_RS01030 44d01de732504c36044d8af4f641ca20 153 SUPERFAMILY SSF89095 4 152 1.41E-35 T 10-03-2017 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 CpPa04_RS01030 44d01de732504c36044d8af4f641ca20 153 Gene3D G3DSA:1.10.1510.10 3 91 1.5E-30 T 10-03-2017 CpPa04_RS01030 44d01de732504c36044d8af4f641ca20 153 Pfam PF09424 Yqey-like protein 5 152 3.4E-49 T 10-03-2017 IPR019004 Uncharacterised domain YOR215C, mitochondrial CpPa04_RS08690 509e446f370afac992133cb19155f05a 521 SMART SM00382 351 521 3.0E-8 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS08690 509e446f370afac992133cb19155f05a 521 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 9 520 1.4E-122 T 10-03-2017 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 CpPa04_RS08690 509e446f370afac992133cb19155f05a 521 Gene3D G3DSA:3.40.50.300 345 520 4.4E-36 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08690 509e446f370afac992133cb19155f05a 521 SUPERFAMILY SSF52540 325 520 2.75E-34 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08690 509e446f370afac992133cb19155f05a 521 Gene3D G3DSA:1.20.1560.10 16 293 1.7E-22 T 10-03-2017 CpPa04_RS08690 509e446f370afac992133cb19155f05a 521 ProSitePatterns PS00211 ABC transporters family signature. 458 472 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS08690 509e446f370afac992133cb19155f05a 521 SUPERFAMILY SSF90123 17 288 5.76E-27 T 10-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CpPa04_RS08690 509e446f370afac992133cb19155f05a 521 Pfam PF00005 ABC transporter 345 486 2.5E-24 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS08690 509e446f370afac992133cb19155f05a 521 Pfam PF00664 ABC transporter transmembrane region 19 206 7.7E-10 T 10-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CpPa04_RS01965 a0e20e4247f5950524865f7103cb7ee6 181 Hamap MF_00235 Adenylate kinase [adk]. 1 180 43.575 T 10-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CpPa04_RS01965 a0e20e4247f5950524865f7103cb7ee6 181 PRINTS PR00094 Adenylate kinase signature 81 97 3.8E-34 T 10-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CpPa04_RS01965 a0e20e4247f5950524865f7103cb7ee6 181 PRINTS PR00094 Adenylate kinase signature 129 144 3.8E-34 T 10-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CpPa04_RS01965 a0e20e4247f5950524865f7103cb7ee6 181 PRINTS PR00094 Adenylate kinase signature 4 17 3.8E-34 T 10-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CpPa04_RS01965 a0e20e4247f5950524865f7103cb7ee6 181 PRINTS PR00094 Adenylate kinase signature 32 46 3.8E-34 T 10-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CpPa04_RS01965 a0e20e4247f5950524865f7103cb7ee6 181 PRINTS PR00094 Adenylate kinase signature 146 160 3.8E-34 T 10-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CpPa04_RS01965 a0e20e4247f5950524865f7103cb7ee6 181 SUPERFAMILY SSF52540 1 179 2.63E-41 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01965 a0e20e4247f5950524865f7103cb7ee6 181 Gene3D G3DSA:3.40.50.300 1 176 5.5E-60 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01965 a0e20e4247f5950524865f7103cb7ee6 181 Pfam PF00406 Adenylate kinase 5 158 1.0E-54 T 10-03-2017 CpPa04_RS01965 a0e20e4247f5950524865f7103cb7ee6 181 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 10-03-2017 CpPa04_RS05635 4393c63349acf35d82d0aca89c15f8dc 334 PIRSF PIRSF000149 1 334 2.6E-131 T 10-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05635 4393c63349acf35d82d0aca89c15f8dc 334 Gene3D G3DSA:3.30.360.10 162 315 7.1E-76 T 10-03-2017 CpPa04_RS05635 4393c63349acf35d82d0aca89c15f8dc 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 313 1.6E-69 T 10-03-2017 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05635 4393c63349acf35d82d0aca89c15f8dc 334 SUPERFAMILY SSF55347 152 313 2.29E-72 T 10-03-2017 CpPa04_RS05635 4393c63349acf35d82d0aca89c15f8dc 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 2.5E-139 T 10-03-2017 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05635 4393c63349acf35d82d0aca89c15f8dc 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 10-03-2017 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05635 4393c63349acf35d82d0aca89c15f8dc 334 SMART SM00846 3 153 4.6E-91 T 10-03-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05635 4393c63349acf35d82d0aca89c15f8dc 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 153 1.3E-60 T 10-03-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05635 4393c63349acf35d82d0aca89c15f8dc 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 4.4E-40 T 10-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05635 4393c63349acf35d82d0aca89c15f8dc 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 4.4E-40 T 10-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05635 4393c63349acf35d82d0aca89c15f8dc 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 4.4E-40 T 10-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05635 4393c63349acf35d82d0aca89c15f8dc 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 4.4E-40 T 10-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05635 4393c63349acf35d82d0aca89c15f8dc 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 4.4E-40 T 10-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05635 4393c63349acf35d82d0aca89c15f8dc 334 SUPERFAMILY SSF51735 3 169 4.12E-63 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS05635 4393c63349acf35d82d0aca89c15f8dc 334 Gene3D G3DSA:3.40.50.720 3 161 1.8E-75 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS00580 2f9dc6cff71deafad4fae75ada386180 244 Pfam PF01569 PAP2 superfamily 111 227 1.4E-17 T 10-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CpPa04_RS00580 2f9dc6cff71deafad4fae75ada386180 244 SUPERFAMILY SSF48317 29 227 7.19E-26 T 10-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CpPa04_RS00580 2f9dc6cff71deafad4fae75ada386180 244 Gene3D G3DSA:1.20.144.10 51 228 2.8E-22 T 10-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CpPa04_RS00580 2f9dc6cff71deafad4fae75ada386180 244 SMART SM00014 107 221 2.2E-4 T 10-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CpPa04_RS09990 6f616f749651073976564d44b52ddc98 456 Gene3D G3DSA:1.20.1250.20 248 450 3.2E-37 T 10-03-2017 CpPa04_RS09990 6f616f749651073976564d44b52ddc98 456 Gene3D G3DSA:1.20.1250.20 25 227 9.4E-48 T 10-03-2017 CpPa04_RS09990 6f616f749651073976564d44b52ddc98 456 SUPERFAMILY SSF103473 17 442 1.7E-74 T 10-03-2017 IPR020846 Major facilitator superfamily domain CpPa04_RS09990 6f616f749651073976564d44b52ddc98 456 ProSitePatterns PS00942 glpT family of transporters signature. 155 171 - T 10-03-2017 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-3229133|Reactome: R-HSA-70153 CpPa04_RS09990 6f616f749651073976564d44b52ddc98 456 PIRSF PIRSF002808 7 454 3.5E-126 T 10-03-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CpPa04_RS09990 6f616f749651073976564d44b52ddc98 456 Pfam PF07690 Major Facilitator Superfamily 35 402 3.2E-39 T 10-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CpPa04_RS07090 4ca83dcc9e5357a612e0f620e1e4582e 461 SUPERFAMILY SSF51984 10 95 8.76E-14 T 10-03-2017 CpPa04_RS07090 4ca83dcc9e5357a612e0f620e1e4582e 461 Gene3D G3DSA:3.90.190.20 315 454 1.6E-32 T 10-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CpPa04_RS07090 4ca83dcc9e5357a612e0f620e1e4582e 461 Gene3D G3DSA:3.40.1190.10 95 311 1.1E-55 T 10-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CpPa04_RS07090 4ca83dcc9e5357a612e0f620e1e4582e 461 Gene3D G3DSA:3.40.50.720 11 93 1.5E-16 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS07090 4ca83dcc9e5357a612e0f620e1e4582e 461 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 458 29.666 T 10-03-2017 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS07090 4ca83dcc9e5357a612e0f620e1e4582e 461 SUPERFAMILY SSF53244 315 456 1.74E-28 T 10-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CpPa04_RS07090 4ca83dcc9e5357a612e0f620e1e4582e 461 SUPERFAMILY SSF53623 112 310 4.19E-43 T 10-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CpPa04_RS07090 4ca83dcc9e5357a612e0f620e1e4582e 461 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 455 3.2E-102 T 10-03-2017 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS07090 4ca83dcc9e5357a612e0f620e1e4582e 461 Pfam PF08245 Mur ligase middle domain 118 247 4.3E-24 T 10-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CpPa04_RS09815 e121d3f70c6a24d5ff4e72d37c4f5701 188 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 182 34.284 T 10-03-2017 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 CpPa04_RS09815 e121d3f70c6a24d5ff4e72d37c4f5701 188 SUPERFAMILY SSF51283 2 183 4.97E-56 T 10-03-2017 IPR029054 dUTPase-like CpPa04_RS09815 e121d3f70c6a24d5ff4e72d37c4f5701 188 Gene3D G3DSA:2.70.40.10 3 183 1.2E-67 T 10-03-2017 IPR029054 dUTPase-like CpPa04_RS09815 e121d3f70c6a24d5ff4e72d37c4f5701 188 Pfam PF00692 dUTPase 69 178 6.7E-10 T 10-03-2017 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 CpPa04_RS09815 e121d3f70c6a24d5ff4e72d37c4f5701 188 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 4 181 2.2E-63 T 10-03-2017 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 CpPa04_RS09680 0627ef19cc066575110ed1ed844ba79d 221 Pfam PF00005 ABC transporter 23 171 8.8E-29 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS09680 0627ef19cc066575110ed1ed844ba79d 221 SUPERFAMILY SSF52540 7 217 3.73E-50 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09680 0627ef19cc066575110ed1ed844ba79d 221 SMART SM00382 32 219 1.2E-20 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS09680 0627ef19cc066575110ed1ed844ba79d 221 Gene3D G3DSA:3.40.50.300 3 217 5.9E-57 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS10125 9e52d0321038a295a3aa836d73178ab2 200 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 3.6E-22 T 10-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CpPa04_RS10125 9e52d0321038a295a3aa836d73178ab2 200 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 3.6E-22 T 10-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CpPa04_RS10125 9e52d0321038a295a3aa836d73178ab2 200 PRINTS PR01703 Manganese superoxide dismutase signature 28 41 3.6E-22 T 10-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CpPa04_RS10125 9e52d0321038a295a3aa836d73178ab2 200 PRINTS PR01703 Manganese superoxide dismutase signature 7 18 3.6E-22 T 10-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CpPa04_RS10125 9e52d0321038a295a3aa836d73178ab2 200 PRINTS PR01703 Manganese superoxide dismutase signature 159 171 3.6E-22 T 10-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CpPa04_RS10125 9e52d0321038a295a3aa836d73178ab2 200 PIRSF PIRSF000349 1 200 9.6E-78 T 10-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CpPa04_RS10125 9e52d0321038a295a3aa836d73178ab2 200 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 194 2.0E-36 T 10-03-2017 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CpPa04_RS10125 9e52d0321038a295a3aa836d73178ab2 200 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 6.1E-31 T 10-03-2017 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CpPa04_RS10125 9e52d0321038a295a3aa836d73178ab2 200 SUPERFAMILY SSF54719 85 199 6.02E-44 T 10-03-2017 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CpPa04_RS10125 9e52d0321038a295a3aa836d73178ab2 200 SUPERFAMILY SSF46609 2 90 3.01E-32 T 10-03-2017 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CpPa04_RS10125 9e52d0321038a295a3aa836d73178ab2 200 Gene3D G3DSA:1.10.287.990 22 85 4.3E-24 T 10-03-2017 CpPa04_RS10125 9e52d0321038a295a3aa836d73178ab2 200 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 161 168 - T 10-03-2017 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CpPa04_RS02935 719a2716059d3e1f155a42e00ca8dc66 229 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 2.2E-81 T 10-03-2017 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 CpPa04_RS02935 719a2716059d3e1f155a42e00ca8dc66 229 Pfam PF00005 ABC transporter 19 166 8.0E-33 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS02935 719a2716059d3e1f155a42e00ca8dc66 229 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS02935 719a2716059d3e1f155a42e00ca8dc66 229 SUPERFAMILY SSF52540 1 220 1.27E-67 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02935 719a2716059d3e1f155a42e00ca8dc66 229 Gene3D G3DSA:3.40.50.300 1 222 6.9E-69 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02935 719a2716059d3e1f155a42e00ca8dc66 229 SMART SM00382 28 215 4.2E-14 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS04925 a661a66ca967f5484d4453d00b345dee 222 Gene3D G3DSA:3.90.79.10 12 185 2.8E-50 T 10-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CpPa04_RS04925 a661a66ca967f5484d4453d00b345dee 222 Pfam PF00293 NUDIX domain 51 160 2.6E-15 T 10-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 CpPa04_RS04925 a661a66ca967f5484d4453d00b345dee 222 SUPERFAMILY SSF55811 11 185 1.02E-43 T 10-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CpPa04_RS05105 a563f6662c297c697a6b2334f5bcc915 350 Gene3D G3DSA:3.10.580.10 239 338 3.2E-12 T 10-03-2017 CpPa04_RS05105 a563f6662c297c697a6b2334f5bcc915 350 SUPERFAMILY SSF54631 206 348 5.43E-23 T 10-03-2017 CpPa04_RS05105 a563f6662c297c697a6b2334f5bcc915 350 Pfam PF01595 Domain of unknown function DUF21 9 202 5.7E-45 T 10-03-2017 IPR002550 Domain of unknown function DUF21 CpPa04_RS05105 a563f6662c297c697a6b2334f5bcc915 350 Pfam PF00571 CBS domain 239 275 2.2E-4 T 10-03-2017 IPR000644 CBS domain CpPa04_RS05105 a563f6662c297c697a6b2334f5bcc915 350 Pfam PF00571 CBS domain 291 337 0.0011 T 10-03-2017 IPR000644 CBS domain CpPa04_RS09850 c85c72433ac43de7e62ebc7b4f7757e6 363 Pfam PF01757 Acyltransferase family 15 342 5.5E-28 T 10-03-2017 IPR002656 Acyltransferase 3 GO:0016747 CpPa04_RS10120 aa15cf8867254874d563f1f5d6a4b765 224 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 49 210 8.9E-52 T 10-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CpPa04_RS10120 aa15cf8867254874d563f1f5d6a4b765 224 Pfam PF01625 Peptide methionine sulfoxide reductase 50 210 8.5E-57 T 10-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CpPa04_RS10120 aa15cf8867254874d563f1f5d6a4b765 224 SUPERFAMILY SSF55068 31 219 4.05E-63 T 10-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CpPa04_RS10120 aa15cf8867254874d563f1f5d6a4b765 224 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 47 216 33.428 T 10-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CpPa04_RS10120 aa15cf8867254874d563f1f5d6a4b765 224 Gene3D G3DSA:3.30.1060.10 17 210 2.6E-65 T 10-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CpPa04_RS05630 6aac05414f7911d325a3d74f61713865 404 Gene3D G3DSA:3.40.50.1270 191 392 7.9E-82 T 10-03-2017 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05630 6aac05414f7911d325a3d74f61713865 404 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 404 40.874 T 10-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05630 6aac05414f7911d325a3d74f61713865 404 Gene3D G3DSA:3.40.50.1260 5 190 2.7E-62 T 10-03-2017 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05630 6aac05414f7911d325a3d74f61713865 404 Pfam PF00162 Phosphoglycerate kinase 14 394 1.1E-144 T 10-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05630 6aac05414f7911d325a3d74f61713865 404 SUPERFAMILY SSF53748 2 403 8.95E-143 T 10-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05630 6aac05414f7911d325a3d74f61713865 404 PRINTS PR00477 Phosphoglycerate kinase family signature 201 220 5.1E-81 T 10-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05630 6aac05414f7911d325a3d74f61713865 404 PRINTS PR00477 Phosphoglycerate kinase family signature 113 128 5.1E-81 T 10-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05630 6aac05414f7911d325a3d74f61713865 404 PRINTS PR00477 Phosphoglycerate kinase family signature 178 200 5.1E-81 T 10-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05630 6aac05414f7911d325a3d74f61713865 404 PRINTS PR00477 Phosphoglycerate kinase family signature 320 345 5.1E-81 T 10-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05630 6aac05414f7911d325a3d74f61713865 404 PRINTS PR00477 Phosphoglycerate kinase family signature 13 29 5.1E-81 T 10-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05630 6aac05414f7911d325a3d74f61713865 404 PRINTS PR00477 Phosphoglycerate kinase family signature 380 397 5.1E-81 T 10-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05630 6aac05414f7911d325a3d74f61713865 404 PRINTS PR00477 Phosphoglycerate kinase family signature 356 367 5.1E-81 T 10-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05630 6aac05414f7911d325a3d74f61713865 404 PRINTS PR00477 Phosphoglycerate kinase family signature 148 170 5.1E-81 T 10-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05630 6aac05414f7911d325a3d74f61713865 404 PRINTS PR00477 Phosphoglycerate kinase family signature 35 57 5.1E-81 T 10-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05630 6aac05414f7911d325a3d74f61713865 404 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 18 28 - T 10-03-2017 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05630 6aac05414f7911d325a3d74f61713865 404 PIRSF PIRSF000724 1 404 1.6E-136 T 10-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS08940 cbd4295f3415efef196965db6df181c3 241 Pfam PF02358 Trehalose-phosphatase 19 207 7.1E-23 T 10-03-2017 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 CpPa04_RS08940 cbd4295f3415efef196965db6df181c3 241 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 15 204 2.3E-11 T 10-03-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CpPa04_RS08940 cbd4295f3415efef196965db6df181c3 241 SUPERFAMILY SSF56784 15 237 2.76E-34 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS08940 cbd4295f3415efef196965db6df181c3 241 Gene3D G3DSA:3.40.50.1000 14 90 1.5E-38 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS08940 cbd4295f3415efef196965db6df181c3 241 Gene3D G3DSA:3.40.50.1000 163 239 1.5E-38 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS08940 cbd4295f3415efef196965db6df181c3 241 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 13 237 5.7E-29 T 10-03-2017 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 CpPa04_RS09700 c31c6e37fec0def14b721be89cb9d08d 534 Pfam PF01384 Phosphate transporter family 67 522 2.9E-118 T 10-03-2017 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 CpPa04_RS01895 2ab4585497830d37dc092566128684d6 135 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 21 135 7.1E-48 T 10-03-2017 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS01895 2ab4585497830d37dc092566128684d6 135 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 21 135 27.363 T 10-03-2017 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01895 2ab4585497830d37dc092566128684d6 135 SUPERFAMILY SSF53137 22 133 1.88E-47 T 10-03-2017 CpPa04_RS01895 2ab4585497830d37dc092566128684d6 135 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 24 135 6.5E-40 T 10-03-2017 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01895 2ab4585497830d37dc092566128684d6 135 Gene3D G3DSA:3.30.420.100 39 135 6.2E-38 T 10-03-2017 CpPa04_RS05330 1932a4dd51055e236e0c755f39b282d6 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 186 7.5E-28 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS05330 1932a4dd51055e236e0c755f39b282d6 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 100 113 1.3E-8 T 10-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CpPa04_RS05330 1932a4dd51055e236e0c755f39b282d6 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 1.3E-8 T 10-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CpPa04_RS05330 1932a4dd51055e236e0c755f39b282d6 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 130 146 1.3E-8 T 10-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CpPa04_RS05330 1932a4dd51055e236e0c755f39b282d6 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 168 1.3E-8 T 10-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CpPa04_RS05330 1932a4dd51055e236e0c755f39b282d6 227 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 78 186 3.0E-15 T 10-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CpPa04_RS05330 1932a4dd51055e236e0c755f39b282d6 227 SUPERFAMILY SSF56784 1 189 5.65E-47 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS05330 1932a4dd51055e236e0c755f39b282d6 227 Gene3D G3DSA:3.40.50.1000 91 189 9.2E-39 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS05330 1932a4dd51055e236e0c755f39b282d6 227 Gene3D G3DSA:3.40.50.1000 1 16 9.2E-39 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS03905 2cc725e7bfc0a99e9e3a0ea5a851d4b6 518 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 119 304 5.0E-16 T 10-03-2017 IPR000914 Solute-binding protein family 5 domain CpPa04_RS03905 2cc725e7bfc0a99e9e3a0ea5a851d4b6 518 SUPERFAMILY SSF53850 54 455 1.54E-35 T 10-03-2017 CpPa04_RS03905 2cc725e7bfc0a99e9e3a0ea5a851d4b6 518 Gene3D G3DSA:3.40.190.10 215 293 5.9E-8 T 10-03-2017 CpPa04_RS03905 2cc725e7bfc0a99e9e3a0ea5a851d4b6 518 Gene3D G3DSA:3.90.76.10 98 214 4.9E-12 T 10-03-2017 CpPa04_RS03905 2cc725e7bfc0a99e9e3a0ea5a851d4b6 518 Gene3D G3DSA:3.10.105.10 364 455 7.9E-4 T 10-03-2017 CpPa04_RS07720 b2b97d83f04a5b3d3d57120114aca620 366 Pfam PF01988 VIT family 141 359 1.4E-55 T 10-03-2017 IPR008217 Ccc1 family CpPa04_RS07720 b2b97d83f04a5b3d3d57120114aca620 366 Gene3D G3DSA:1.20.1260.10 20 128 9.4E-10 T 10-03-2017 IPR012347 Ferritin-related CpPa04_RS09980 7eda7b5ccc22583b1723e83fe4e07c8e 1029 Gene3D G3DSA:2.60.40.1280 52 164 5.4E-25 T 10-03-2017 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 CpPa04_RS09980 7eda7b5ccc22583b1723e83fe4e07c8e 1029 SUPERFAMILY SSF49401 71 162 1.41E-15 T 10-03-2017 IPR008966 Adhesion domain CpPa04_RS09005 e311a91193e11326efbda132d7909b1c 209 Pfam PF00484 Carbonic anhydrase 54 201 1.7E-34 T 10-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CpPa04_RS09005 e311a91193e11326efbda132d7909b1c 209 SUPERFAMILY SSF53056 5 204 3.4E-49 T 10-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CpPa04_RS09005 e311a91193e11326efbda132d7909b1c 209 SMART SM00947 46 205 4.1E-44 T 10-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CpPa04_RS09005 e311a91193e11326efbda132d7909b1c 209 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 95 115 - T 10-03-2017 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CpPa04_RS09005 e311a91193e11326efbda132d7909b1c 209 Gene3D G3DSA:3.40.1050.10 8 205 3.2E-47 T 10-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CpPa04_RS04210 97327736a59e155b375eb5aaf7d7466c 514 Gene3D G3DSA:1.10.1060.10 308 415 3.5E-12 T 10-03-2017 CpPa04_RS04210 97327736a59e155b375eb5aaf7d7466c 514 SUPERFAMILY SSF100950 81 105 4.18E-36 T 10-03-2017 CpPa04_RS04210 97327736a59e155b375eb5aaf7d7466c 514 SUPERFAMILY SSF100950 151 311 4.18E-36 T 10-03-2017 CpPa04_RS04210 97327736a59e155b375eb5aaf7d7466c 514 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 88 310 2.2E-47 T 10-03-2017 IPR003741 LUD domain CpPa04_RS04210 97327736a59e155b375eb5aaf7d7466c 514 Pfam PF11870 Domain of unknown function (DUF3390) 413 487 1.5E-6 T 10-03-2017 IPR024569 4Fe-4S binding protein, C-terminal CpPa04_RS04210 97327736a59e155b375eb5aaf7d7466c 514 Pfam PF13183 4Fe-4S dicluster domain 326 397 4.0E-10 T 10-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CpPa04_RS04210 97327736a59e155b375eb5aaf7d7466c 514 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 329 340 - T 10-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CpPa04_RS04210 97327736a59e155b375eb5aaf7d7466c 514 Gene3D G3DSA:3.40.50.10420 208 307 5.6E-44 T 10-03-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CpPa04_RS04210 97327736a59e155b375eb5aaf7d7466c 514 Gene3D G3DSA:3.40.50.10420 81 144 5.6E-44 T 10-03-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CpPa04_RS04210 97327736a59e155b375eb5aaf7d7466c 514 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 37 471 1.4E-138 T 10-03-2017 IPR004452 4Fe-4S binding protein GO:0019516 CpPa04_RS04210 97327736a59e155b375eb5aaf7d7466c 514 SUPERFAMILY SSF54862 306 422 2.51E-15 T 10-03-2017 CpPa04_RS09735 c55ca7ff4b7839e066b18b1806832251 336 SUPERFAMILY SSF53807 60 332 3.92E-40 T 10-03-2017 CpPa04_RS09735 c55ca7ff4b7839e066b18b1806832251 336 Pfam PF01497 Periplasmic binding protein 65 310 4.0E-27 T 10-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CpPa04_RS09735 c55ca7ff4b7839e066b18b1806832251 336 Gene3D G3DSA:3.40.50.1980 61 193 1.4E-16 T 10-03-2017 CpPa04_RS09735 c55ca7ff4b7839e066b18b1806832251 336 Gene3D G3DSA:3.40.50.1980 201 332 5.4E-23 T 10-03-2017 CpPa04_RS01400 4f1d8070f39dcd34a462597d8bc189ca 562 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 21 35 - T 10-03-2017 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CpPa04_RS01400 4f1d8070f39dcd34a462597d8bc189ca 562 SUPERFAMILY SSF69618 287 539 4.32E-66 T 10-03-2017 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CpPa04_RS01400 4f1d8070f39dcd34a462597d8bc189ca 562 Pfam PF02602 Uroporphyrinogen-III synthase HemD 301 532 5.4E-63 T 10-03-2017 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CpPa04_RS01400 4f1d8070f39dcd34a462597d8bc189ca 562 Gene3D G3DSA:3.40.1010.10 15 164 4.7E-28 T 10-03-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS01400 4f1d8070f39dcd34a462597d8bc189ca 562 Gene3D G3DSA:3.30.950.10 170 291 1.1E-20 T 10-03-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS01400 4f1d8070f39dcd34a462597d8bc189ca 562 Gene3D G3DSA:3.40.50.10090 292 416 8.0E-38 T 10-03-2017 CpPa04_RS01400 4f1d8070f39dcd34a462597d8bc189ca 562 Gene3D G3DSA:3.40.50.10090 423 540 2.1E-31 T 10-03-2017 CpPa04_RS01400 4f1d8070f39dcd34a462597d8bc189ca 562 SUPERFAMILY SSF53790 107 290 1.41E-38 T 10-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS01400 4f1d8070f39dcd34a462597d8bc189ca 562 SUPERFAMILY SSF53790 13 71 1.41E-38 T 10-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS01400 4f1d8070f39dcd34a462597d8bc189ca 562 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 17 252 8.8E-38 T 10-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS07030 011102bea739021f4d55103bc4aeeb26 1052 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 661 1.8E-186 T 10-03-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS07030 011102bea739021f4d55103bc4aeeb26 1052 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 10-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS07030 011102bea739021f4d55103bc4aeeb26 1052 Pfam PF08264 Anticodon-binding domain of tRNA 709 850 1.1E-23 T 10-03-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CpPa04_RS07030 011102bea739021f4d55103bc4aeeb26 1052 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 10 1042 13.586 T 10-03-2017 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CpPa04_RS07030 011102bea739021f4d55103bc4aeeb26 1052 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 546 559 2.0E-28 T 10-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CpPa04_RS07030 011102bea739021f4d55103bc4aeeb26 1052 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 2.0E-28 T 10-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CpPa04_RS07030 011102bea739021f4d55103bc4aeeb26 1052 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 243 266 2.0E-28 T 10-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CpPa04_RS07030 011102bea739021f4d55103bc4aeeb26 1052 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 417 432 2.0E-28 T 10-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CpPa04_RS07030 011102bea739021f4d55103bc4aeeb26 1052 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 586 595 2.0E-28 T 10-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CpPa04_RS07030 011102bea739021f4d55103bc4aeeb26 1052 SUPERFAMILY SSF47323 682 909 6.92E-44 T 10-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS07030 011102bea739021f4d55103bc4aeeb26 1052 Gene3D G3DSA:3.90.740.10 214 405 1.0E-57 T 10-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CpPa04_RS07030 011102bea739021f4d55103bc4aeeb26 1052 SUPERFAMILY SSF52374 20 208 2.58E-123 T 10-03-2017 CpPa04_RS07030 011102bea739021f4d55103bc4aeeb26 1052 SUPERFAMILY SSF52374 419 660 2.58E-123 T 10-03-2017 CpPa04_RS07030 011102bea739021f4d55103bc4aeeb26 1052 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 19 857 1.3E-250 T 10-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CpPa04_RS07030 011102bea739021f4d55103bc4aeeb26 1052 Gene3D G3DSA:1.10.730.10 669 843 3.8E-41 T 10-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS07030 011102bea739021f4d55103bc4aeeb26 1052 Gene3D G3DSA:3.40.50.620 20 204 1.4E-140 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS07030 011102bea739021f4d55103bc4aeeb26 1052 Gene3D G3DSA:3.40.50.620 422 658 1.4E-140 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS07030 011102bea739021f4d55103bc4aeeb26 1052 SUPERFAMILY SSF50677 213 419 7.85E-47 T 10-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CpPa04_RS02725 770a28b2abe1d5fc594250409796e0f5 75 Pfam PF11305 Protein of unknown function (DUF3107) 1 72 7.9E-31 T 10-03-2017 IPR021456 Protein of unknown function DUF3107 CpPa04_RS07945 588a076d8237e5ec497198567b407026 184 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 79 178 9.9E-5 T 10-03-2017 IPR003477 mRNA interferase PemK-like protein GO:0003677 CpPa04_RS07945 588a076d8237e5ec497198567b407026 184 SUPERFAMILY SSF50118 73 180 9.16E-7 T 10-03-2017 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CpPa04_RS10315 c6a3d127e787e07c21a0599ebf2f3d82 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 10-03-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS10315 c6a3d127e787e07c21a0599ebf2f3d82 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 150 25.162 T 10-03-2017 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS10315 c6a3d127e787e07c21a0599ebf2f3d82 150 Gene3D G3DSA:3.10.430.100 61 149 1.2E-27 T 10-03-2017 IPR020069 Ribosomal protein L9, C-terminal CpPa04_RS10315 c6a3d127e787e07c21a0599ebf2f3d82 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 4.4E-37 T 10-03-2017 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS10315 c6a3d127e787e07c21a0599ebf2f3d82 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 149 1.6E-26 T 10-03-2017 IPR020069 Ribosomal protein L9, C-terminal CpPa04_RS10315 c6a3d127e787e07c21a0599ebf2f3d82 150 SUPERFAMILY SSF55658 1 57 8.2E-17 T 10-03-2017 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CpPa04_RS10315 c6a3d127e787e07c21a0599ebf2f3d82 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 2.0E-19 T 10-03-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS10315 c6a3d127e787e07c21a0599ebf2f3d82 150 SUPERFAMILY SSF55653 61 149 5.23E-24 T 10-03-2017 IPR020069 Ribosomal protein L9, C-terminal CpPa04_RS10315 c6a3d127e787e07c21a0599ebf2f3d82 150 Gene3D G3DSA:3.40.5.10 1 51 1.7E-21 T 10-03-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS00095 9f7dac95f0ef988de0c39a8d5f954eec 257 SUPERFAMILY SSF52540 7 233 8.09E-57 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00095 9f7dac95f0ef988de0c39a8d5f954eec 257 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS00095 9f7dac95f0ef988de0c39a8d5f954eec 257 Pfam PF00005 ABC transporter 24 175 8.5E-31 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS00095 9f7dac95f0ef988de0c39a8d5f954eec 257 Gene3D G3DSA:3.40.50.300 5 241 1.1E-59 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00095 9f7dac95f0ef988de0c39a8d5f954eec 257 SMART SM00382 33 223 2.4E-14 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS07110 4c62991018916cfd5279bb4ee23ab9a4 675 Gene3D G3DSA:3.90.1310.10 213 313 2.7E-27 T 10-03-2017 CpPa04_RS07110 4c62991018916cfd5279bb4ee23ab9a4 675 Pfam PF03717 Penicillin-binding Protein dimerisation domain 103 288 2.6E-12 T 10-03-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CpPa04_RS07110 4c62991018916cfd5279bb4ee23ab9a4 675 Gene3D G3DSA:3.40.710.10 314 656 9.1E-87 T 10-03-2017 IPR012338 Beta-lactamase/transpeptidase-like CpPa04_RS07110 4c62991018916cfd5279bb4ee23ab9a4 675 Pfam PF00905 Penicillin binding protein transpeptidase domain 333 651 8.7E-76 T 10-03-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CpPa04_RS07110 4c62991018916cfd5279bb4ee23ab9a4 675 SUPERFAMILY SSF56601 307 660 1.11E-87 T 10-03-2017 IPR012338 Beta-lactamase/transpeptidase-like CpPa04_RS07110 4c62991018916cfd5279bb4ee23ab9a4 675 SUPERFAMILY SSF56519 98 138 1.01E-29 T 10-03-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CpPa04_RS07110 4c62991018916cfd5279bb4ee23ab9a4 675 SUPERFAMILY SSF56519 168 306 1.01E-29 T 10-03-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CpPa04_RS07810 7a0d7f199e76f5da21f5e3dabf804993 184 TIGRFAM TIGR02150 IPP_isom_1: isopentenyl-diphosphate delta-isomerase 7 171 3.2E-43 T 10-03-2017 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 CpPa04_RS07810 7a0d7f199e76f5da21f5e3dabf804993 184 Gene3D G3DSA:3.90.79.10 3 174 3.3E-38 T 10-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CpPa04_RS07810 7a0d7f199e76f5da21f5e3dabf804993 184 PIRSF PIRSF018427 1 184 1.2E-54 T 10-03-2017 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 CpPa04_RS07810 7a0d7f199e76f5da21f5e3dabf804993 184 Pfam PF00293 NUDIX domain 32 159 1.8E-17 T 10-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 CpPa04_RS07810 7a0d7f199e76f5da21f5e3dabf804993 184 Hamap MF_00202 Isopentenyl-diphosphate Delta-isomerase [idi]. 5 183 33.93 T 10-03-2017 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 CpPa04_RS07810 7a0d7f199e76f5da21f5e3dabf804993 184 SUPERFAMILY SSF55811 5 174 1.82E-42 T 10-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CpPa04_RS08535 f37b552afc437da8257f1ffc2d5ebce2 904 Gene3D G3DSA:2.60.40.1280 72 233 1.4E-23 T 10-03-2017 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 CpPa04_RS08535 f37b552afc437da8257f1ffc2d5ebce2 904 PRINTS PR01217 Proline rich extensin signature 845 857 2.5E-9 T 10-03-2017 CpPa04_RS08535 f37b552afc437da8257f1ffc2d5ebce2 904 PRINTS PR01217 Proline rich extensin signature 813 838 2.5E-9 T 10-03-2017 CpPa04_RS08535 f37b552afc437da8257f1ffc2d5ebce2 904 PRINTS PR01217 Proline rich extensin signature 776 793 2.5E-9 T 10-03-2017 CpPa04_RS08535 f37b552afc437da8257f1ffc2d5ebce2 904 PRINTS PR01217 Proline rich extensin signature 734 755 2.5E-9 T 10-03-2017 CpPa04_RS08535 f37b552afc437da8257f1ffc2d5ebce2 904 SUPERFAMILY SSF49401 76 183 7.46E-13 T 10-03-2017 IPR008966 Adhesion domain CpPa04_RS03970 b65ffeb60e175e199018b8e9552f84a6 285 SUPERFAMILY SSF51717 13 273 3.66E-79 T 10-03-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CpPa04_RS03970 b65ffeb60e175e199018b8e9552f84a6 285 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 14 270 1.6E-82 T 10-03-2017 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CpPa04_RS03970 b65ffeb60e175e199018b8e9552f84a6 285 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 15 30 - T 10-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CpPa04_RS03970 b65ffeb60e175e199018b8e9552f84a6 285 Pfam PF00809 Pterin binding enzyme 16 256 1.2E-65 T 10-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CpPa04_RS03970 b65ffeb60e175e199018b8e9552f84a6 285 Gene3D G3DSA:3.20.20.20 14 273 5.5E-83 T 10-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CpPa04_RS03970 b65ffeb60e175e199018b8e9552f84a6 285 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 49 62 - T 10-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CpPa04_RS06020 c9c1b099aacfc432d1f2e01d1a4ae51d 197 SUPERFAMILY SSF54197 24 189 4.02E-35 T 10-03-2017 IPR011146 HIT-like domain GO:0003824 CpPa04_RS06020 c9c1b099aacfc432d1f2e01d1a4ae51d 197 Pfam PF01230 HIT domain 65 153 7.9E-14 T 10-03-2017 IPR001310 Histidine triad (HIT) protein CpPa04_RS06020 c9c1b099aacfc432d1f2e01d1a4ae51d 197 Gene3D G3DSA:3.30.428.10 59 187 4.2E-36 T 10-03-2017 IPR011146 HIT-like domain GO:0003824 CpPa04_RS06555 b38f7ac940f0f44ad237c7ddccfdcc19 206 Gene3D G3DSA:3.40.50.300 12 206 1.9E-66 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06555 b38f7ac940f0f44ad237c7ddccfdcc19 206 PIRSF PIRSF015617 3 206 2.3E-65 T 10-03-2017 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CpPa04_RS06555 b38f7ac940f0f44ad237c7ddccfdcc19 206 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 21 206 2.3E-75 T 10-03-2017 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CpPa04_RS06555 b38f7ac940f0f44ad237c7ddccfdcc19 206 SUPERFAMILY SSF52540 15 206 4.87E-59 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06555 b38f7ac940f0f44ad237c7ddccfdcc19 206 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 27 206 6.6E-61 T 10-03-2017 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CpPa04_RS02440 2bbb9de1046a2086623ebe41a402bcd3 591 Gene3D G3DSA:3.30.1490.20 136 208 8.3E-24 T 10-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CpPa04_RS02440 2bbb9de1046a2086623ebe41a402bcd3 591 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 292 299 - T 10-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CpPa04_RS02440 2bbb9de1046a2086623ebe41a402bcd3 591 Pfam PF00364 Biotin-requiring enzyme 525 590 1.0E-15 T 10-03-2017 IPR000089 Biotin/lipoyl attachment CpPa04_RS02440 2bbb9de1046a2086623ebe41a402bcd3 591 Gene3D G3DSA:2.40.50.100 522 591 1.6E-22 T 10-03-2017 CpPa04_RS02440 2bbb9de1046a2086623ebe41a402bcd3 591 SUPERFAMILY SSF56059 89 333 2.65E-59 T 10-03-2017 CpPa04_RS02440 2bbb9de1046a2086623ebe41a402bcd3 591 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 121 328 1.8E-78 T 10-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CpPa04_RS02440 2bbb9de1046a2086623ebe41a402bcd3 591 SUPERFAMILY SSF52440 6 119 1.29E-44 T 10-03-2017 IPR016185 Pre-ATP-grasp domain CpPa04_RS02440 2bbb9de1046a2086623ebe41a402bcd3 591 SMART SM00878 341 451 6.3E-58 T 10-03-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CpPa04_RS02440 2bbb9de1046a2086623ebe41a402bcd3 591 SUPERFAMILY SSF51246 335 455 1.31E-38 T 10-03-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CpPa04_RS02440 2bbb9de1046a2086623ebe41a402bcd3 591 Gene3D G3DSA:3.30.470.20 210 454 5.6E-91 T 10-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CpPa04_RS02440 2bbb9de1046a2086623ebe41a402bcd3 591 SUPERFAMILY SSF51230 521 590 6.02E-20 T 10-03-2017 IPR011053 Single hybrid motif CpPa04_RS02440 2bbb9de1046a2086623ebe41a402bcd3 591 Pfam PF00289 Biotin carboxylase, N-terminal domain 8 116 2.6E-42 T 10-03-2017 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CpPa04_RS02440 2bbb9de1046a2086623ebe41a402bcd3 591 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 547 564 - T 10-03-2017 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CpPa04_RS02440 2bbb9de1046a2086623ebe41a402bcd3 591 Pfam PF02785 Biotin carboxylase C-terminal domain 341 452 4.2E-38 T 10-03-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CpPa04_RS02440 2bbb9de1046a2086623ebe41a402bcd3 591 Gene3D G3DSA:3.40.50.20 8 135 5.3E-46 T 10-03-2017 IPR016185 Pre-ATP-grasp domain CpPa04_RS06835 67bcbdb3040f34d4ace452afe199ef05 420 Gene3D G3DSA:3.30.70.360 196 308 8.6E-31 T 10-03-2017 IPR011650 Peptidase M20, dimerisation domain CpPa04_RS06835 67bcbdb3040f34d4ace452afe199ef05 420 Pfam PF07687 Peptidase dimerisation domain 201 295 1.5E-11 T 10-03-2017 IPR011650 Peptidase M20, dimerisation domain CpPa04_RS06835 67bcbdb3040f34d4ace452afe199ef05 420 Gene3D G3DSA:3.40.630.10 3 193 3.6E-69 T 10-03-2017 CpPa04_RS06835 67bcbdb3040f34d4ace452afe199ef05 420 Gene3D G3DSA:3.40.630.10 312 417 3.6E-69 T 10-03-2017 CpPa04_RS06835 67bcbdb3040f34d4ace452afe199ef05 420 SUPERFAMILY SSF55031 198 306 1.83E-25 T 10-03-2017 IPR011650 Peptidase M20, dimerisation domain CpPa04_RS06835 67bcbdb3040f34d4ace452afe199ef05 420 SUPERFAMILY SSF53187 315 371 1.52E-58 T 10-03-2017 CpPa04_RS06835 67bcbdb3040f34d4ace452afe199ef05 420 SUPERFAMILY SSF53187 16 212 1.52E-58 T 10-03-2017 CpPa04_RS06835 67bcbdb3040f34d4ace452afe199ef05 420 PIRSF PIRSF005962 7 376 9.4E-89 T 10-03-2017 IPR017439 Amidohydrolase GO:0016787 CpPa04_RS06835 67bcbdb3040f34d4ace452afe199ef05 420 Pfam PF01546 Peptidase family M20/M25/M40 80 363 3.8E-18 T 10-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CpPa04_RS06835 67bcbdb3040f34d4ace452afe199ef05 420 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 27 359 3.9E-69 T 10-03-2017 IPR017439 Amidohydrolase GO:0016787 CpPa04_RS06530 84109c0fecaa3ba6b5ddd3b5bb8f38a6 250 Gene3D G3DSA:3.40.1010.10 12 127 6.1E-35 T 10-03-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS06530 84109c0fecaa3ba6b5ddd3b5bb8f38a6 250 SUPERFAMILY SSF53790 4 247 4.45E-64 T 10-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS06530 84109c0fecaa3ba6b5ddd3b5bb8f38a6 250 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 12 248 8.2E-78 T 10-03-2017 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CpPa04_RS06530 84109c0fecaa3ba6b5ddd3b5bb8f38a6 250 Gene3D G3DSA:3.30.950.10 128 248 4.4E-39 T 10-03-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS06530 84109c0fecaa3ba6b5ddd3b5bb8f38a6 250 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 12 226 2.5E-45 T 10-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS05860 1abbd8bab1729f5afa107b66d327d977 920 SMART SM00490 753 833 1.3E-5 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS05860 1abbd8bab1729f5afa107b66d327d977 920 Gene3D G3DSA:1.10.150.20 261 303 1.5E-4 T 10-03-2017 CpPa04_RS05860 1abbd8bab1729f5afa107b66d327d977 920 SUPERFAMILY SSF52540 476 659 1.93E-36 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05860 1abbd8bab1729f5afa107b66d327d977 920 Gene3D G3DSA:3.40.50.300 722 871 4.3E-13 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05860 1abbd8bab1729f5afa107b66d327d977 920 Pfam PF00176 SNF2 family N-terminal domain 495 703 1.7E-28 T 10-03-2017 IPR000330 SNF2-related, N-terminal domain GO:0005524 CpPa04_RS05860 1abbd8bab1729f5afa107b66d327d977 920 SUPERFAMILY SSF52540 592 648 4.29E-38 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05860 1abbd8bab1729f5afa107b66d327d977 920 SUPERFAMILY SSF52540 714 868 4.29E-38 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05860 1abbd8bab1729f5afa107b66d327d977 920 Gene3D G3DSA:3.40.50.300 477 640 5.6E-22 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05860 1abbd8bab1729f5afa107b66d327d977 920 Pfam PF00271 Helicase conserved C-terminal domain 724 833 2.3E-10 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS05860 1abbd8bab1729f5afa107b66d327d977 920 SMART SM00487 473 652 2.6E-20 T 10-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CpPa04_RS08160 89af1a91666492609bd9c734d5d2ffd1 298 Pfam PF04657 Putative inner membrane exporter, YdcZ 160 293 6.4E-30 T 10-03-2017 IPR006750 Putative inner membrane exporter, YdcZ CpPa04_RS08160 89af1a91666492609bd9c734d5d2ffd1 298 Pfam PF04657 Putative inner membrane exporter, YdcZ 2 140 3.4E-39 T 10-03-2017 IPR006750 Putative inner membrane exporter, YdcZ CpPa04_RS03395 1c06335817ea41da24ca25eae6d3f672 309 Pfam PF00483 Nucleotidyl transferase 19 279 3.7E-28 T 10-03-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CpPa04_RS03395 1c06335817ea41da24ca25eae6d3f672 309 Gene3D G3DSA:3.90.550.10 16 288 3.8E-57 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS03395 1c06335817ea41da24ca25eae6d3f672 309 SUPERFAMILY SSF53448 17 293 1.37E-55 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS09400 4f2ed7d971ed75a1f3826fac8f24e2a3 241 SUPERFAMILY SSF48452 138 223 2.86E-16 T 10-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CpPa04_RS09400 4f2ed7d971ed75a1f3826fac8f24e2a3 241 SMART SM00028 149 182 0.074 T 10-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CpPa04_RS09400 4f2ed7d971ed75a1f3826fac8f24e2a3 241 SMART SM00028 183 218 37.0 T 10-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CpPa04_RS09400 4f2ed7d971ed75a1f3826fac8f24e2a3 241 Gene3D G3DSA:1.25.40.10 136 221 3.5E-16 T 10-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CpPa04_RS04785 782f565d2e3499e513b97128cf4308dc 173 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 170 29.899 T 10-03-2017 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CpPa04_RS04785 782f565d2e3499e513b97128cf4308dc 173 SUPERFAMILY SSF54364 5 78 3.66E-30 T 10-03-2017 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CpPa04_RS04785 782f565d2e3499e513b97128cf4308dc 173 Gene3D G3DSA:3.10.20.80 3 78 3.2E-37 T 10-03-2017 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CpPa04_RS04785 782f565d2e3499e513b97128cf4308dc 173 SUPERFAMILY SSF55200 85 167 1.23E-30 T 10-03-2017 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 CpPa04_RS04785 782f565d2e3499e513b97128cf4308dc 173 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 84 167 3.8E-34 T 10-03-2017 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 CpPa04_RS04785 782f565d2e3499e513b97128cf4308dc 173 ProSitePatterns PS00938 Initiation factor 3 signature. 58 71 - T 10-03-2017 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 CpPa04_RS04785 782f565d2e3499e513b97128cf4308dc 173 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 7 76 1.1E-31 T 10-03-2017 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CpPa04_RS04785 782f565d2e3499e513b97128cf4308dc 173 Gene3D G3DSA:3.30.110.10 79 170 8.4E-38 T 10-03-2017 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 CpPa04_RS04785 782f565d2e3499e513b97128cf4308dc 173 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 7 169 5.7E-63 T 10-03-2017 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CpPa04_RS06195 b9c152e591c3c8702334ab9e258a87ca 327 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 318 1.3E-118 T 10-03-2017 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 CpPa04_RS06195 b9c152e591c3c8702334ab9e258a87ca 327 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 247 1.2E-62 T 10-03-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CpPa04_RS06195 b9c152e591c3c8702334ab9e258a87ca 327 SUPERFAMILY SSF51735 1 314 4.34E-92 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS06195 b9c152e591c3c8702334ab9e258a87ca 327 Gene3D G3DSA:3.40.50.720 1 169 4.4E-51 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS06195 b9c152e591c3c8702334ab9e258a87ca 327 Gene3D G3DSA:3.90.25.10 170 317 1.5E-43 T 10-03-2017 CpPa04_RS00850 1bcc49d35b08de92a2175e06b1293aac 554 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 487 523 6.6E-6 T 10-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS00850 1bcc49d35b08de92a2175e06b1293aac 554 Gene3D G3DSA:3.40.120.10 312 443 1.4E-32 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS00850 1bcc49d35b08de92a2175e06b1293aac 554 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 142 156 1.0E-9 T 10-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS00850 1bcc49d35b08de92a2175e06b1293aac 554 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 232 251 1.0E-9 T 10-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS00850 1bcc49d35b08de92a2175e06b1293aac 554 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 298 313 1.0E-9 T 10-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS00850 1bcc49d35b08de92a2175e06b1293aac 554 Gene3D G3DSA:3.40.120.10 234 311 1.0E-22 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS00850 1bcc49d35b08de92a2175e06b1293aac 554 SUPERFAMILY SSF53738 210 318 4.71E-22 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS00850 1bcc49d35b08de92a2175e06b1293aac 554 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 143 152 - T 10-03-2017 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS00850 1bcc49d35b08de92a2175e06b1293aac 554 SUPERFAMILY SSF55957 448 540 6.02E-13 T 10-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS00850 1bcc49d35b08de92a2175e06b1293aac 554 SUPERFAMILY SSF53738 36 219 1.22E-35 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS00850 1bcc49d35b08de92a2175e06b1293aac 554 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 212 317 2.7E-25 T 10-03-2017 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS00850 1bcc49d35b08de92a2175e06b1293aac 554 SUPERFAMILY SSF53738 306 441 5.49E-25 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS00850 1bcc49d35b08de92a2175e06b1293aac 554 Gene3D G3DSA:3.40.120.10 18 216 6.4E-51 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS00850 1bcc49d35b08de92a2175e06b1293aac 554 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 329 435 2.0E-14 T 10-03-2017 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS00850 1bcc49d35b08de92a2175e06b1293aac 554 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 46 164 1.0E-30 T 10-03-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS00850 1bcc49d35b08de92a2175e06b1293aac 554 Gene3D G3DSA:3.30.310.50 465 551 6.5E-18 T 10-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS08610 f6479a062a6288c9de3e16799301c78c 418 Gene3D G3DSA:3.65.10.10 22 220 5.6E-65 T 10-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 CpPa04_RS08610 f6479a062a6288c9de3e16799301c78c 418 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 406 1.6E-101 T 10-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 CpPa04_RS08610 f6479a062a6288c9de3e16799301c78c 418 SUPERFAMILY SSF55205 4 417 1.46E-131 T 10-03-2017 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CpPa04_RS08610 f6479a062a6288c9de3e16799301c78c 418 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 2 416 41.364 T 10-03-2017 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS08610 f6479a062a6288c9de3e16799301c78c 418 Gene3D G3DSA:3.65.10.10 221 416 7.1E-53 T 10-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 CpPa04_RS08610 f6479a062a6288c9de3e16799301c78c 418 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 4 415 1.1E-163 T 10-03-2017 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS01905 e8e4c0c0b4d7fbf99cbd3e472c4346d2 61 Pfam PF00327 Ribosomal protein L30p/L7e 3 53 1.2E-20 T 10-03-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CpPa04_RS01905 e8e4c0c0b4d7fbf99cbd3e472c4346d2 61 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 57 19.364 T 10-03-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 CpPa04_RS01905 e8e4c0c0b4d7fbf99cbd3e472c4346d2 61 Gene3D G3DSA:3.30.1390.20 3 58 1.8E-26 T 10-03-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CpPa04_RS01905 e8e4c0c0b4d7fbf99cbd3e472c4346d2 61 SUPERFAMILY SSF55129 3 58 1.09E-20 T 10-03-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CpPa04_RS01905 e8e4c0c0b4d7fbf99cbd3e472c4346d2 61 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 3 57 6.8E-24 T 10-03-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 CpPa04_RS01905 e8e4c0c0b4d7fbf99cbd3e472c4346d2 61 PIRSF PIRSF002211 1 59 8.5E-26 T 10-03-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 CpPa04_RS09730 4f94bc0d37f6601f7e060527e0af1df1 355 Gene3D G3DSA:1.10.3470.10 30 354 6.2E-92 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS09730 4f94bc0d37f6601f7e060527e0af1df1 355 Pfam PF01032 FecCD transport family 39 350 7.7E-83 T 10-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CpPa04_RS09730 4f94bc0d37f6601f7e060527e0af1df1 355 SUPERFAMILY SSF81345 23 352 4.58E-73 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS04600 44d6e9eab224fac342acf38b830a4917 469 SUPERFAMILY SSF53474 216 244 7.28E-20 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS04600 44d6e9eab224fac342acf38b830a4917 469 SUPERFAMILY SSF53474 29 173 7.28E-20 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS04600 44d6e9eab224fac342acf38b830a4917 469 Gene3D G3DSA:3.40.50.1820 33 242 6.1E-32 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS04600 44d6e9eab224fac342acf38b830a4917 469 SMART SM01110 32 256 2.0E-17 T 10-03-2017 IPR000675 Cutinase/acetylxylan esterase GO:0008152|GO:0016787 CpPa04_RS04600 44d6e9eab224fac342acf38b830a4917 469 Pfam PF01083 Cutinase 83 242 1.6E-10 T 10-03-2017 IPR000675 Cutinase/acetylxylan esterase GO:0008152|GO:0016787 CpPa04_RS01685 683bc07dff632d685986b2a08a6bd0a3 253 Pfam PF12679 ABC-2 family transporter protein 52 252 1.0E-6 T 10-03-2017 IPR032688 ABC-2 family transporter protein GO:0006810 CpPa04_RS08060 4c937c04982a01b534f54ad55adbe366 142 Pfam PF14017 Protein of unknown function (DUF4233) 29 134 2.4E-26 T 10-03-2017 IPR025327 Protein of unknown function DUF4233 CpPa04_RS05930 af1ea3f1bf9a52bbeaffe7b321d145df 759 Pfam PF02824 TGS domain 420 479 1.4E-20 T 10-03-2017 IPR004095 TGS KEGG: 00970+6.1.1.3 CpPa04_RS05930 af1ea3f1bf9a52bbeaffe7b321d145df 759 SUPERFAMILY SSF81271 407 479 2.4E-20 T 10-03-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CpPa04_RS05930 af1ea3f1bf9a52bbeaffe7b321d145df 759 Gene3D G3DSA:3.10.20.30 419 482 4.3E-23 T 10-03-2017 IPR012675 Beta-grasp domain CpPa04_RS05930 af1ea3f1bf9a52bbeaffe7b321d145df 759 Gene3D G3DSA:3.30.460.10 222 355 1.3E-42 T 10-03-2017 CpPa04_RS05930 af1ea3f1bf9a52bbeaffe7b321d145df 759 SUPERFAMILY SSF55021 678 756 2.12E-11 T 10-03-2017 CpPa04_RS05930 af1ea3f1bf9a52bbeaffe7b321d145df 759 Pfam PF13328 HD domain 58 205 1.3E-46 T 10-03-2017 IPR003607 HD/PDEase domain CpPa04_RS05930 af1ea3f1bf9a52bbeaffe7b321d145df 759 Gene3D G3DSA:3.30.70.260 680 752 1.1E-10 T 10-03-2017 CpPa04_RS05930 af1ea3f1bf9a52bbeaffe7b321d145df 759 SUPERFAMILY SSF81301 222 397 7.85E-61 T 10-03-2017 CpPa04_RS05930 af1ea3f1bf9a52bbeaffe7b321d145df 759 Pfam PF13291 ACT domain 678 754 3.7E-18 T 10-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 CpPa04_RS05930 af1ea3f1bf9a52bbeaffe7b321d145df 759 Pfam PF04607 Region found in RelA / SpoT proteins 265 374 3.6E-34 T 10-03-2017 IPR007685 RelA/SpoT GO:0015969 CpPa04_RS05930 af1ea3f1bf9a52bbeaffe7b321d145df 759 SMART SM00471 73 183 2.4E-13 T 10-03-2017 IPR003607 HD/PDEase domain CpPa04_RS05930 af1ea3f1bf9a52bbeaffe7b321d145df 759 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 58 754 2.7E-258 T 10-03-2017 IPR004811 RelA/SpoT family GO:0015969 CpPa04_RS05930 af1ea3f1bf9a52bbeaffe7b321d145df 759 SMART SM00954 265 375 6.7E-57 T 10-03-2017 IPR007685 RelA/SpoT GO:0015969 CpPa04_RS05930 af1ea3f1bf9a52bbeaffe7b321d145df 759 SUPERFAMILY SSF109604 33 220 4.35E-69 T 10-03-2017 CpPa04_RS00835 916a936b37f773b4ea87e9e75d467c75 238 SUPERFAMILY SSF53167 6 235 8.9E-84 T 10-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CpPa04_RS00835 916a936b37f773b4ea87e9e75d467c75 238 Pfam PF01048 Phosphorylase superfamily 19 223 2.1E-39 T 10-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CpPa04_RS00835 916a936b37f773b4ea87e9e75d467c75 238 Gene3D G3DSA:3.40.50.1580 15 233 2.3E-75 T 10-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CpPa04_RS00835 916a936b37f773b4ea87e9e75d467c75 238 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 10-03-2017 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CpPa04_RS00835 916a936b37f773b4ea87e9e75d467c75 238 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 8 234 2.4E-78 T 10-03-2017 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 CpPa04_RS00835 916a936b37f773b4ea87e9e75d467c75 238 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 5 238 40.497 T 10-03-2017 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 CpPa04_RS08020 081f8d058bcc43c2d2ed8c0178c36032 417 Gene3D G3DSA:3.40.1160.10 59 304 7.7E-55 T 10-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase CpPa04_RS08020 081f8d058bcc43c2d2ed8c0178c36032 417 SUPERFAMILY SSF53633 59 305 9.56E-58 T 10-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase CpPa04_RS08020 081f8d058bcc43c2d2ed8c0178c36032 417 Hamap MF_00456 Glutamate 5-kinase [proB]. 59 307 33.751 T 10-03-2017 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CpPa04_RS08020 081f8d058bcc43c2d2ed8c0178c36032 417 TIGRFAM TIGR01027 proB: glutamate 5-kinase 59 410 1.9E-125 T 10-03-2017 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CpPa04_RS08020 081f8d058bcc43c2d2ed8c0178c36032 417 ProSitePatterns PS00902 Glutamate 5-kinase signature. 259 276 - T 10-03-2017 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CpPa04_RS08020 081f8d058bcc43c2d2ed8c0178c36032 417 PIRSF PIRSF000729 54 414 1.0E-123 T 10-03-2017 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CpPa04_RS08020 081f8d058bcc43c2d2ed8c0178c36032 417 Pfam PF01472 PUA domain 328 392 1.1E-17 T 10-03-2017 IPR002478 PUA domain GO:0003723 CpPa04_RS08020 081f8d058bcc43c2d2ed8c0178c36032 417 SMART SM00359 326 405 1.9E-16 T 10-03-2017 IPR002478 PUA domain GO:0003723 CpPa04_RS08020 081f8d058bcc43c2d2ed8c0178c36032 417 SUPERFAMILY SSF88697 326 395 1.1E-15 T 10-03-2017 IPR015947 PUA-like domain CpPa04_RS08020 081f8d058bcc43c2d2ed8c0178c36032 417 PRINTS PR00474 Glutamate 5-kinase family signature 202 229 1.1E-51 T 10-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 CpPa04_RS08020 081f8d058bcc43c2d2ed8c0178c36032 417 PRINTS PR00474 Glutamate 5-kinase family signature 170 191 1.1E-51 T 10-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 CpPa04_RS08020 081f8d058bcc43c2d2ed8c0178c36032 417 PRINTS PR00474 Glutamate 5-kinase family signature 130 158 1.1E-51 T 10-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 CpPa04_RS08020 081f8d058bcc43c2d2ed8c0178c36032 417 PRINTS PR00474 Glutamate 5-kinase family signature 261 281 1.1E-51 T 10-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 CpPa04_RS08020 081f8d058bcc43c2d2ed8c0178c36032 417 PRINTS PR00474 Glutamate 5-kinase family signature 96 110 1.1E-51 T 10-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 CpPa04_RS08020 081f8d058bcc43c2d2ed8c0178c36032 417 Pfam PF00696 Amino acid kinase family 60 286 4.8E-39 T 10-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase CpPa04_RS08020 081f8d058bcc43c2d2ed8c0178c36032 417 Gene3D G3DSA:2.30.130.10 324 410 2.7E-19 T 10-03-2017 IPR015947 PUA-like domain CpPa04_RS00310 46cfe4fe9ed7798f63931423596be98f 84 ProDom PD028237 MB1616 ML1221 CGL0073 RV1590/MT1625 20 84 5.0E-27 T 10-03-2017 CpPa04_RS04935 be37365addba34ebe3a2cbcc63ac1769 289 SUPERFAMILY SSF52540 36 288 1.17E-64 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04935 be37365addba34ebe3a2cbcc63ac1769 289 Pfam PF13614 AAA domain 37 213 8.3E-61 T 10-03-2017 IPR025669 AAA domain CpPa04_RS04935 be37365addba34ebe3a2cbcc63ac1769 289 Gene3D G3DSA:3.40.50.300 34 287 6.9E-68 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04360 b4e05bdb8bff20f299090b34ea354e0b 671 SUPERFAMILY SSF51445 186 557 4.66E-81 T 10-03-2017 IPR017853 Glycoside hydrolase superfamily CpPa04_RS04360 b4e05bdb8bff20f299090b34ea354e0b 671 Gene3D G3DSA:3.20.20.80 190 555 4.8E-64 T 10-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CpPa04_RS04360 b4e05bdb8bff20f299090b34ea354e0b 671 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 1 652 43.069 T 10-03-2017 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16 CpPa04_RS04360 b4e05bdb8bff20f299090b34ea354e0b 671 Pfam PF11896 Domain of unknown function (DUF3416) 3 190 3.2E-52 T 10-03-2017 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16 CpPa04_RS04360 b4e05bdb8bff20f299090b34ea354e0b 671 SMART SM00642 196 550 0.0031 T 10-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CpPa04_RS04360 b4e05bdb8bff20f299090b34ea354e0b 671 Gene3D G3DSA:2.60.40.1180 562 640 1.2E-7 T 10-03-2017 IPR013780 Glycosyl hydrolase, all-beta CpPa04_RS09475 de87e2088491680c02bf0bb031169da0 380 PIRSF PIRSF021505 1 378 1.8E-77 T 10-03-2017 IPR014512 Predicted O-glycosyl hydrolase CpPa04_RS09475 de87e2088491680c02bf0bb031169da0 380 Gene3D G3DSA:1.50.10.10 35 292 2.5E-13 T 10-03-2017 IPR012341 Six-hairpin glycosidase GO:0003824 CpPa04_RS09475 de87e2088491680c02bf0bb031169da0 380 SUPERFAMILY SSF48208 28 330 3.83E-16 T 10-03-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 CpPa04_RS09475 de87e2088491680c02bf0bb031169da0 380 Pfam PF03663 Glycosyl hydrolase family 76 50 313 8.2E-15 T 10-03-2017 IPR005198 Glycoside hydrolase, family 76 KEGG: 00052+3.2.1.10|KEGG: 00500+3.2.1.10 CpPa04_RS09070 23d744e7e3d64a98a0d27131bdd1971a 429 SUPERFAMILY SSF118215 8 407 2.22E-98 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS09070 23d744e7e3d64a98a0d27131bdd1971a 429 Pfam PF00375 Sodium:dicarboxylate symporter family 8 406 6.2E-105 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS09070 23d744e7e3d64a98a0d27131bdd1971a 429 Gene3D G3DSA:1.10.3860.10 4 410 7.8E-102 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS09070 23d744e7e3d64a98a0d27131bdd1971a 429 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 3.0E-31 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS09070 23d744e7e3d64a98a0d27131bdd1971a 429 PRINTS PR00173 Glutamate-aspartate symporter signature 47 67 3.0E-31 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS09070 23d744e7e3d64a98a0d27131bdd1971a 429 PRINTS PR00173 Glutamate-aspartate symporter signature 152 174 3.0E-31 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS09070 23d744e7e3d64a98a0d27131bdd1971a 429 PRINTS PR00173 Glutamate-aspartate symporter signature 199 218 3.0E-31 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS09070 23d744e7e3d64a98a0d27131bdd1971a 429 PRINTS PR00173 Glutamate-aspartate symporter signature 361 381 3.0E-31 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS09070 23d744e7e3d64a98a0d27131bdd1971a 429 PRINTS PR00173 Glutamate-aspartate symporter signature 335 354 3.0E-31 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS09070 23d744e7e3d64a98a0d27131bdd1971a 429 PRINTS PR00173 Glutamate-aspartate symporter signature 77 102 3.0E-31 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS09070 23d744e7e3d64a98a0d27131bdd1971a 429 PRINTS PR00173 Glutamate-aspartate symporter signature 300 326 3.0E-31 T 10-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CpPa04_RS01480 7154863165c8ce93a77d9a3754f4c92e 333 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 94 330 2.2E-72 T 10-03-2017 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 CpPa04_RS01480 7154863165c8ce93a77d9a3754f4c92e 333 Pfam PF01578 Cytochrome C assembly protein 118 327 1.4E-39 T 10-03-2017 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CpPa04_RS05760 09684a42b5e0d07a0567cab4d536a5bf 190 SUPERFAMILY SSF53271 13 179 9.01E-39 T 10-03-2017 IPR029057 Phosphoribosyltransferase-like CpPa04_RS05760 09684a42b5e0d07a0567cab4d536a5bf 190 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 8 185 35.027 T 10-03-2017 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CpPa04_RS05760 09684a42b5e0d07a0567cab4d536a5bf 190 Pfam PF00156 Phosphoribosyl transferase domain 17 155 1.0E-21 T 10-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 CpPa04_RS05760 09684a42b5e0d07a0567cab4d536a5bf 190 Gene3D G3DSA:3.40.50.2020 11 173 4.8E-45 T 10-03-2017 IPR029057 Phosphoribosyltransferase-like CpPa04_RS08945 37f29e2ec53b4b9b4756af4406037cfd 363 Pfam PF13377 Periplasmic binding protein-like domain 181 358 1.1E-23 T 10-03-2017 CpPa04_RS08945 37f29e2ec53b4b9b4756af4406037cfd 363 SUPERFAMILY SSF47413 8 66 3.38E-10 T 10-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CpPa04_RS08945 37f29e2ec53b4b9b4756af4406037cfd 363 Gene3D G3DSA:3.40.50.2300 64 182 6.8E-18 T 10-03-2017 CpPa04_RS08945 37f29e2ec53b4b9b4756af4406037cfd 363 SUPERFAMILY SSF53822 92 343 1.35E-39 T 10-03-2017 IPR028082 Periplasmic binding protein-like I CpPa04_RS08945 37f29e2ec53b4b9b4756af4406037cfd 363 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 52 3.0E-8 T 10-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CpPa04_RS08945 37f29e2ec53b4b9b4756af4406037cfd 363 SMART SM00354 8 79 1.4E-9 T 10-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CpPa04_RS08945 37f29e2ec53b4b9b4756af4406037cfd 363 Gene3D G3DSA:3.40.50.2300 183 338 3.3E-41 T 10-03-2017 CpPa04_RS08945 37f29e2ec53b4b9b4756af4406037cfd 363 Gene3D G3DSA:1.10.260.40 7 63 1.7E-15 T 10-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CpPa04_RS08810 a2f7a6eb4c3055eb2b0b1494411e0003 79 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 4 74 1.6E-23 T 10-03-2017 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 CpPa04_RS08810 a2f7a6eb4c3055eb2b0b1494411e0003 79 Gene3D G3DSA:3.30.1280.10 3 77 3.9E-28 T 10-03-2017 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 CpPa04_RS08810 a2f7a6eb4c3055eb2b0b1494411e0003 79 SUPERFAMILY SSF82697 3 76 2.79E-21 T 10-03-2017 CpPa04_RS08810 a2f7a6eb4c3055eb2b0b1494411e0003 79 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 11 74 5.0E-25 T 10-03-2017 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 CpPa04_RS08810 a2f7a6eb4c3055eb2b0b1494411e0003 79 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 76 18.873 T 10-03-2017 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 CpPa04_RS08810 a2f7a6eb4c3055eb2b0b1494411e0003 79 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 4 77 1.6E-14 T 10-03-2017 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 CpPa04_RS02510 744614ad501b92610d55c35d82d5ba30 166 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 5 159 2.6E-66 T 10-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CpPa04_RS02510 744614ad501b92610d55c35d82d5ba30 166 Pfam PF00731 AIR carboxylase 5 150 1.3E-64 T 10-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CpPa04_RS02510 744614ad501b92610d55c35d82d5ba30 166 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 5 156 32.877 T 10-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CpPa04_RS02510 744614ad501b92610d55c35d82d5ba30 166 Gene3D G3DSA:3.40.50.7700 2 160 5.5E-74 T 10-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CpPa04_RS02510 744614ad501b92610d55c35d82d5ba30 166 SUPERFAMILY SSF52255 3 163 3.01E-66 T 10-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CpPa04_RS02510 744614ad501b92610d55c35d82d5ba30 166 SMART SM01001 3 152 1.8E-96 T 10-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CpPa04_RS02510 744614ad501b92610d55c35d82d5ba30 166 PIRSF PIRSF001338 1 163 9.9E-69 T 10-03-2017 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 CpPa04_RS00730 d780de5b939e6b9d9df969e286f954d5 324 Pfam PF00107 Zinc-binding dehydrogenase 168 285 2.8E-13 T 10-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CpPa04_RS00730 d780de5b939e6b9d9df969e286f954d5 324 SMART SM00829 8 321 0.0015 T 10-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CpPa04_RS00730 d780de5b939e6b9d9df969e286f954d5 324 Gene3D G3DSA:3.40.50.720 160 272 2.7E-26 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS00730 d780de5b939e6b9d9df969e286f954d5 324 SUPERFAMILY SSF51735 132 287 6.1E-28 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS00730 d780de5b939e6b9d9df969e286f954d5 324 Gene3D G3DSA:3.90.180.10 1 159 1.0E-31 T 10-03-2017 IPR011032 GroES-like CpPa04_RS00730 d780de5b939e6b9d9df969e286f954d5 324 SUPERFAMILY SSF50129 1 167 6.7E-33 T 10-03-2017 IPR011032 GroES-like CpPa04_RS00730 d780de5b939e6b9d9df969e286f954d5 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 125 1.4E-13 T 10-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CpPa04_RS04995 547dbff3ae69473b7197d5a5d5fd3f73 414 Pfam PF00756 Putative esterase 177 404 4.5E-18 T 10-03-2017 IPR000801 Putative esterase Reactome: R-HSA-156590 CpPa04_RS04995 547dbff3ae69473b7197d5a5d5fd3f73 414 SUPERFAMILY SSF53474 173 409 2.17E-31 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS04995 547dbff3ae69473b7197d5a5d5fd3f73 414 Gene3D G3DSA:3.40.50.1820 142 410 9.9E-48 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS01880 1a50c3101f584f403e9348e51779846f 410 SMART SM00014 162 276 1.6E-6 T 10-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CpPa04_RS01880 1a50c3101f584f403e9348e51779846f 410 Gene3D G3DSA:1.20.144.10 56 297 7.8E-51 T 10-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CpPa04_RS01880 1a50c3101f584f403e9348e51779846f 410 PRINTS PR00483 Bacterial acid phosphatase class A signature 239 263 2.7E-5 T 10-03-2017 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 CpPa04_RS01880 1a50c3101f584f403e9348e51779846f 410 PRINTS PR00483 Bacterial acid phosphatase class A signature 207 233 2.7E-5 T 10-03-2017 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 CpPa04_RS01880 1a50c3101f584f403e9348e51779846f 410 SUPERFAMILY SSF48317 126 293 7.98E-29 T 10-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CpPa04_RS01880 1a50c3101f584f403e9348e51779846f 410 Pfam PF01569 PAP2 superfamily 170 272 3.0E-14 T 10-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CpPa04_RS07050 309e27a703f204592e69a9bd21b6b6a7 149 Hamap MF_01197 Cell division protein SepF [sepF]. 1 146 14.279 T 10-03-2017 IPR023052 Cell division protein SepF GO:0090529 CpPa04_RS07050 309e27a703f204592e69a9bd21b6b6a7 149 Pfam PF04472 Protein of unknown function (DUF552) 66 138 4.3E-23 T 10-03-2017 IPR007561 Cell division protein SepF/SepF-related GO:0090529 CpPa04_RS09110 ccbbe5c0aa73c6ddf9d2a2107b14a4ed 151 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 83 94 - T 10-03-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CpPa04_RS09110 ccbbe5c0aa73c6ddf9d2a2107b14a4ed 151 Gene3D G3DSA:3.30.70.560 2 142 4.5E-45 T 10-03-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CpPa04_RS09110 ccbbe5c0aa73c6ddf9d2a2107b14a4ed 151 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 3 127 1.9E-36 T 10-03-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CpPa04_RS09110 ccbbe5c0aa73c6ddf9d2a2107b14a4ed 151 SUPERFAMILY SSF55083 2 138 3.4E-43 T 10-03-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CpPa04_RS09110 ccbbe5c0aa73c6ddf9d2a2107b14a4ed 151 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 4 127 1.1E-33 T 10-03-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CpPa04_RS03940 3d9541c79bee365800a27a6f89b7ab09 469 Pfam PF00324 Amino acid permease 17 451 1.3E-92 T 10-03-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CpPa04_RS03940 3d9541c79bee365800a27a6f89b7ab09 469 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 10-03-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CpPa04_RS03940 3d9541c79bee365800a27a6f89b7ab09 469 PIRSF PIRSF006060 1 465 9.1E-70 T 10-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CpPa04_RS02345 32b681ff379cba93e543abab93287217 409 Gene3D G3DSA:1.20.1250.20 23 201 8.5E-28 T 10-03-2017 CpPa04_RS02345 32b681ff379cba93e543abab93287217 409 Gene3D G3DSA:1.20.1250.20 219 392 4.4E-14 T 10-03-2017 CpPa04_RS02345 32b681ff379cba93e543abab93287217 409 Pfam PF07690 Major Facilitator Superfamily 27 342 5.0E-34 T 10-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CpPa04_RS02345 32b681ff379cba93e543abab93287217 409 SUPERFAMILY SSF103473 17 394 4.58E-55 T 10-03-2017 IPR020846 Major facilitator superfamily domain CpPa04_RS01995 841e02128a2b5a609f16d844eddaccc8 122 SUPERFAMILY SSF46946 2 121 5.23E-46 T 10-03-2017 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CpPa04_RS01995 841e02128a2b5a609f16d844eddaccc8 122 Gene3D G3DSA:4.10.910.10 73 122 6.2E-27 T 10-03-2017 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01995 841e02128a2b5a609f16d844eddaccc8 122 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 120 28.154 T 10-03-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01995 841e02128a2b5a609f16d844eddaccc8 122 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 10-03-2017 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01995 841e02128a2b5a609f16d844eddaccc8 122 Gene3D G3DSA:1.10.8.50 1 72 3.0E-29 T 10-03-2017 CpPa04_RS01995 841e02128a2b5a609f16d844eddaccc8 122 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 9.0E-53 T 10-03-2017 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01995 841e02128a2b5a609f16d844eddaccc8 122 Pfam PF00416 Ribosomal protein S13/S18 3 109 2.0E-33 T 10-03-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01995 841e02128a2b5a609f16d844eddaccc8 122 PIRSF PIRSF002134 1 122 3.4E-46 T 10-03-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS00210 ba44c5f891a0e6c488ea577c9a7e33a7 107 Gene3D G3DSA:1.10.10.10 18 105 9.5E-20 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS00210 ba44c5f891a0e6c488ea577c9a7e33a7 107 Pfam PF03551 Transcriptional regulator PadR-like family 21 87 5.3E-16 T 10-03-2017 IPR005149 Transcription regulator PadR, N-terminal CpPa04_RS00210 ba44c5f891a0e6c488ea577c9a7e33a7 107 SUPERFAMILY SSF46785 19 104 2.84E-17 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS03960 b3f9c241ca20e8f0f5abb9fb5059eecf 357 SUPERFAMILY SSF55031 168 265 7.48E-20 T 10-03-2017 IPR011650 Peptidase M20, dimerisation domain CpPa04_RS03960 b3f9c241ca20e8f0f5abb9fb5059eecf 357 TIGRFAM TIGR01900 dapE-gram_pos: succinyl-diaminopimelate desuccinylase 5 355 6.5E-143 T 10-03-2017 IPR010174 Succinyl-diaminopimelate desuccinylase, DapE GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 CpPa04_RS03960 b3f9c241ca20e8f0f5abb9fb5059eecf 357 Gene3D G3DSA:3.30.70.360 177 265 4.7E-21 T 10-03-2017 IPR011650 Peptidase M20, dimerisation domain CpPa04_RS03960 b3f9c241ca20e8f0f5abb9fb5059eecf 357 Pfam PF01546 Peptidase family M20/M25/M40 64 355 5.7E-19 T 10-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CpPa04_RS03960 b3f9c241ca20e8f0f5abb9fb5059eecf 357 Pfam PF07687 Peptidase dimerisation domain 167 264 1.1E-12 T 10-03-2017 IPR011650 Peptidase M20, dimerisation domain CpPa04_RS03960 b3f9c241ca20e8f0f5abb9fb5059eecf 357 SUPERFAMILY SSF53187 7 180 3.52E-45 T 10-03-2017 CpPa04_RS03960 b3f9c241ca20e8f0f5abb9fb5059eecf 357 SUPERFAMILY SSF53187 277 356 3.52E-45 T 10-03-2017 CpPa04_RS03960 b3f9c241ca20e8f0f5abb9fb5059eecf 357 Gene3D G3DSA:3.40.630.10 300 355 1.4E-43 T 10-03-2017 CpPa04_RS03960 b3f9c241ca20e8f0f5abb9fb5059eecf 357 Gene3D G3DSA:3.40.630.10 7 176 1.4E-43 T 10-03-2017 CpPa04_RS04470 439412e6976e4bbabc59cef0fee430b5 501 Gene3D G3DSA:1.10.10.410 443 501 2.4E-7 T 10-03-2017 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CpPa04_RS04470 439412e6976e4bbabc59cef0fee430b5 501 SUPERFAMILY SSF89095 353 500 3.4E-25 T 10-03-2017 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 CpPa04_RS04470 439412e6976e4bbabc59cef0fee430b5 501 SMART SM00845 353 500 7.9E-57 T 10-03-2017 IPR018027 Asn/Gln amidotransferase GO:0016884 CpPa04_RS04470 439412e6976e4bbabc59cef0fee430b5 501 Pfam PF02934 GatB/GatE catalytic domain 21 315 4.2E-101 T 10-03-2017 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 CpPa04_RS04470 439412e6976e4bbabc59cef0fee430b5 501 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 17 500 1.5E-144 T 10-03-2017 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 CpPa04_RS04470 439412e6976e4bbabc59cef0fee430b5 501 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 166 180 - T 10-03-2017 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 CpPa04_RS04470 439412e6976e4bbabc59cef0fee430b5 501 Pfam PF02637 GatB domain 354 500 3.5E-41 T 10-03-2017 IPR018027 Asn/Gln amidotransferase GO:0016884 CpPa04_RS04470 439412e6976e4bbabc59cef0fee430b5 501 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 17 501 35.735 T 10-03-2017 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 CpPa04_RS04470 439412e6976e4bbabc59cef0fee430b5 501 SUPERFAMILY SSF55931 20 322 6.08E-108 T 10-03-2017 CpPa04_RS03285 4c422e2e1108727b39b4d29b339566a6 525 Pfam PF02142 MGS-like domain 20 133 2.9E-22 T 10-03-2017 IPR011607 Methylglyoxal synthase-like domain CpPa04_RS03285 4c422e2e1108727b39b4d29b339566a6 525 SUPERFAMILY SSF53927 215 525 1.5E-117 T 10-03-2017 IPR016193 Cytidine deaminase-like GO:0003824 CpPa04_RS03285 4c422e2e1108727b39b4d29b339566a6 525 Gene3D G3DSA:3.40.50.1380 6 189 3.9E-75 T 10-03-2017 IPR011607 Methylglyoxal synthase-like domain CpPa04_RS03285 4c422e2e1108727b39b4d29b339566a6 525 SMART SM00798 139 454 2.1E-183 T 10-03-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CpPa04_RS03285 4c422e2e1108727b39b4d29b339566a6 525 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 9 525 4.7E-166 T 10-03-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CpPa04_RS03285 4c422e2e1108727b39b4d29b339566a6 525 Gene3D G3DSA:3.40.140.20 367 515 8.7E-55 T 10-03-2017 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CpPa04_RS03285 4c422e2e1108727b39b4d29b339566a6 525 Pfam PF01808 AICARFT/IMPCHase bienzyme 139 453 9.5E-114 T 10-03-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CpPa04_RS03285 4c422e2e1108727b39b4d29b339566a6 525 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 8 525 41.523 T 10-03-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CpPa04_RS03285 4c422e2e1108727b39b4d29b339566a6 525 Gene3D G3DSA:3.40.140.20 245 360 8.0E-46 T 10-03-2017 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CpPa04_RS03285 4c422e2e1108727b39b4d29b339566a6 525 SUPERFAMILY SSF52335 8 197 3.89E-62 T 10-03-2017 IPR011607 Methylglyoxal synthase-like domain CpPa04_RS03285 4c422e2e1108727b39b4d29b339566a6 525 SMART SM00851 20 134 7.5E-46 T 10-03-2017 IPR011607 Methylglyoxal synthase-like domain CpPa04_RS03285 4c422e2e1108727b39b4d29b339566a6 525 PIRSF PIRSF000414 2 525 1.6E-196 T 10-03-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CpPa04_RS06185 359a92b9906c2397dbbe43c72ea90a5f 329 SUPERFAMILY SSF88659 169 242 1.96E-17 T 10-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06185 359a92b9906c2397dbbe43c72ea90a5f 329 Pfam PF04542 Sigma-70 region 2 96 165 7.1E-22 T 10-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06185 359a92b9906c2397dbbe43c72ea90a5f 329 Pfam PF04545 Sigma-70, region 4 264 317 1.2E-17 T 10-03-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06185 359a92b9906c2397dbbe43c72ea90a5f 329 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 92 317 2.4E-35 T 10-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06185 359a92b9906c2397dbbe43c72ea90a5f 329 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 120 133 - T 10-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06185 359a92b9906c2397dbbe43c72ea90a5f 329 Gene3D G3DSA:1.10.10.10 169 220 8.5E-19 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS06185 359a92b9906c2397dbbe43c72ea90a5f 329 PRINTS PR00046 Major sigma-70 factor signature 289 304 1.6E-27 T 10-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06185 359a92b9906c2397dbbe43c72ea90a5f 329 PRINTS PR00046 Major sigma-70 factor signature 304 315 1.6E-27 T 10-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06185 359a92b9906c2397dbbe43c72ea90a5f 329 PRINTS PR00046 Major sigma-70 factor signature 144 152 1.6E-27 T 10-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06185 359a92b9906c2397dbbe43c72ea90a5f 329 PRINTS PR00046 Major sigma-70 factor signature 120 133 1.6E-27 T 10-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06185 359a92b9906c2397dbbe43c72ea90a5f 329 PRINTS PR00046 Major sigma-70 factor signature 268 280 1.6E-27 T 10-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06185 359a92b9906c2397dbbe43c72ea90a5f 329 Gene3D G3DSA:1.10.601.10 23 165 3.9E-61 T 10-03-2017 CpPa04_RS06185 359a92b9906c2397dbbe43c72ea90a5f 329 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 289 315 - T 10-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06185 359a92b9906c2397dbbe43c72ea90a5f 329 SUPERFAMILY SSF88946 28 166 3.14E-50 T 10-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06185 359a92b9906c2397dbbe43c72ea90a5f 329 Pfam PF04539 Sigma-70 region 3 175 250 8.3E-24 T 10-03-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06185 359a92b9906c2397dbbe43c72ea90a5f 329 SUPERFAMILY SSF88659 226 325 3.18E-24 T 10-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06185 359a92b9906c2397dbbe43c72ea90a5f 329 Pfam PF00140 Sigma-70 factor, region 1.2 30 63 3.2E-11 T 10-03-2017 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS06185 359a92b9906c2397dbbe43c72ea90a5f 329 Gene3D G3DSA:1.10.10.10 260 327 6.0E-27 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS01815 dc1f43d514a968c3c0c7c6dd7e790f12 138 PRINTS PR00060 Ribosomal protein L16 signature 88 117 9.2E-36 T 10-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS01815 dc1f43d514a968c3c0c7c6dd7e790f12 138 PRINTS PR00060 Ribosomal protein L16 signature 42 53 9.2E-36 T 10-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS01815 dc1f43d514a968c3c0c7c6dd7e790f12 138 PRINTS PR00060 Ribosomal protein L16 signature 58 87 9.2E-36 T 10-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS01815 dc1f43d514a968c3c0c7c6dd7e790f12 138 PRINTS PR00060 Ribosomal protein L16 signature 24 36 9.2E-36 T 10-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS01815 dc1f43d514a968c3c0c7c6dd7e790f12 138 Gene3D G3DSA:3.90.1170.10 23 136 1.5E-51 T 10-03-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CpPa04_RS01815 dc1f43d514a968c3c0c7c6dd7e790f12 138 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 3.0E-47 T 10-03-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CpPa04_RS01815 dc1f43d514a968c3c0c7c6dd7e790f12 138 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 10-03-2017 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01815 dc1f43d514a968c3c0c7c6dd7e790f12 138 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 36.823 T 10-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS01815 dc1f43d514a968c3c0c7c6dd7e790f12 138 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 10-03-2017 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01815 dc1f43d514a968c3c0c7c6dd7e790f12 138 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.8E-53 T 10-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS01815 dc1f43d514a968c3c0c7c6dd7e790f12 138 SUPERFAMILY SSF54686 1 135 1.31E-53 T 10-03-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CpPa04_RS05090 faae79b24d15f480d95743d04b5a3bfb 187 SMART SM00422 29 101 6.1E-19 T 10-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CpPa04_RS05090 faae79b24d15f480d95743d04b5a3bfb 187 SUPERFAMILY SSF46955 29 119 3.89E-14 T 10-03-2017 IPR009061 Putative DNA-binding domain CpPa04_RS05090 faae79b24d15f480d95743d04b5a3bfb 187 Gene3D G3DSA:1.10.1660.10 34 104 1.4E-12 T 10-03-2017 CpPa04_RS05090 faae79b24d15f480d95743d04b5a3bfb 187 Pfam PF13411 MerR HTH family regulatory protein 33 98 4.2E-13 T 10-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CpPa04_RS02845 a1e1ca1d3441a5bf5748bea22f1b3c33 212 Gene3D G3DSA:2.40.10.10 52 109 6.6E-6 T 10-03-2017 CpPa04_RS02845 a1e1ca1d3441a5bf5748bea22f1b3c33 212 Pfam PF00089 Trypsin 51 199 4.6E-7 T 10-03-2017 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 CpPa04_RS02845 a1e1ca1d3441a5bf5748bea22f1b3c33 212 Gene3D G3DSA:2.40.10.10 117 196 5.4E-7 T 10-03-2017 CpPa04_RS02845 a1e1ca1d3441a5bf5748bea22f1b3c33 212 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 63 68 - T 10-03-2017 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 CpPa04_RS02845 a1e1ca1d3441a5bf5748bea22f1b3c33 212 SUPERFAMILY SSF50494 48 198 5.31E-18 T 10-03-2017 IPR009003 Peptidase S1, PA clan CpPa04_RS02460 835a7e66a37eb7c091890985a3116f1e 138 Pfam PF11349 Protein of unknown function (DUF3151) 9 135 1.5E-50 T 10-03-2017 IPR014487 Protein of unknown function DUF3151 CpPa04_RS02460 835a7e66a37eb7c091890985a3116f1e 138 PIRSF PIRSF017349 1 138 3.4E-62 T 10-03-2017 IPR014487 Protein of unknown function DUF3151 CpPa04_RS00515 fc86854a57665da71fd3b63f4bb24bb6 253 Pfam PF00106 short chain dehydrogenase 10 201 1.7E-28 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS00515 fc86854a57665da71fd3b63f4bb24bb6 253 SUPERFAMILY SSF51735 9 250 1.25E-38 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS00515 fc86854a57665da71fd3b63f4bb24bb6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.4E-14 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS00515 fc86854a57665da71fd3b63f4bb24bb6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.4E-14 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS00515 fc86854a57665da71fd3b63f4bb24bb6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.4E-14 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS00515 fc86854a57665da71fd3b63f4bb24bb6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.4E-14 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS00515 fc86854a57665da71fd3b63f4bb24bb6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.4E-14 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS00515 fc86854a57665da71fd3b63f4bb24bb6 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 10-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CpPa04_RS00515 fc86854a57665da71fd3b63f4bb24bb6 253 Gene3D G3DSA:3.40.50.720 11 224 2.8E-36 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS04570 68acdd8e6be2c2ae9909d60fa44ad4b7 265 Gene3D G3DSA:3.90.850.10 45 263 1.1E-71 T 10-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CpPa04_RS04570 68acdd8e6be2c2ae9909d60fa44ad4b7 265 SUPERFAMILY SSF56529 51 263 3.4E-61 T 10-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CpPa04_RS04570 68acdd8e6be2c2ae9909d60fa44ad4b7 265 Pfam PF10370 Domain of unknown function (DUF2437) 1 54 3.3E-14 T 10-03-2017 IPR018833 Domain of unknown function DUF2437 CpPa04_RS04570 68acdd8e6be2c2ae9909d60fa44ad4b7 265 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 59 262 6.2E-58 T 10-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CpPa04_RS04630 55dbe7c38e85b85e93a41448d2297b52 196 Gene3D G3DSA:3.20.19.10 1 187 1.6E-38 T 10-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CpPa04_RS04630 55dbe7c38e85b85e93a41448d2297b52 196 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 181 1.0E-57 T 10-03-2017 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CpPa04_RS04630 55dbe7c38e85b85e93a41448d2297b52 196 Pfam PF00694 Aconitase C-terminal domain 1 117 3.9E-25 T 10-03-2017 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 CpPa04_RS04630 55dbe7c38e85b85e93a41448d2297b52 196 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 192 38.43 T 10-03-2017 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CpPa04_RS04630 55dbe7c38e85b85e93a41448d2297b52 196 SUPERFAMILY SSF52016 1 185 1.16E-50 T 10-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CpPa04_RS06265 ae4a8410e38ee1bcf75826a09b6a5879 267 SUPERFAMILY SSF46785 10 63 4.57E-12 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS06265 ae4a8410e38ee1bcf75826a09b6a5879 267 Gene3D G3DSA:1.10.10.10 13 61 8.1E-8 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS06265 ae4a8410e38ee1bcf75826a09b6a5879 267 SMART SM00420 10 62 5.3E-19 T 10-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CpPa04_RS06265 ae4a8410e38ee1bcf75826a09b6a5879 267 SUPERFAMILY SSF100950 87 248 4.19E-26 T 10-03-2017 CpPa04_RS06265 ae4a8410e38ee1bcf75826a09b6a5879 267 Gene3D G3DSA:3.40.50.1360 86 229 5.2E-10 T 10-03-2017 CpPa04_RS06265 ae4a8410e38ee1bcf75826a09b6a5879 267 SMART SM01134 83 248 6.0E-56 T 10-03-2017 CpPa04_RS06265 ae4a8410e38ee1bcf75826a09b6a5879 267 Pfam PF00455 DeoR C terminal sensor domain 86 247 6.6E-43 T 10-03-2017 IPR014036 DeoR C-terminal sensor domain CpPa04_RS06265 ae4a8410e38ee1bcf75826a09b6a5879 267 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 28 42 2.3E-10 T 10-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CpPa04_RS06265 ae4a8410e38ee1bcf75826a09b6a5879 267 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 42 60 2.3E-10 T 10-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CpPa04_RS06265 ae4a8410e38ee1bcf75826a09b6a5879 267 Pfam PF08220 DeoR-like helix-turn-helix domain 10 62 9.0E-18 T 10-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CpPa04_RS08280 80a9cec2e51e5cc98f615bcd704a05d2 275 SMART SM01130 2 275 2.0E-19 T 10-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CpPa04_RS08280 80a9cec2e51e5cc98f615bcd704a05d2 275 Pfam PF00701 Dihydrodipicolinate synthetase family 5 274 7.8E-33 T 10-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CpPa04_RS08280 80a9cec2e51e5cc98f615bcd704a05d2 275 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 1.2E-11 T 10-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CpPa04_RS08280 80a9cec2e51e5cc98f615bcd704a05d2 275 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 1.2E-11 T 10-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CpPa04_RS08280 80a9cec2e51e5cc98f615bcd704a05d2 275 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 1.2E-11 T 10-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CpPa04_RS08280 80a9cec2e51e5cc98f615bcd704a05d2 275 Gene3D G3DSA:3.20.20.70 6 273 1.6E-51 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS08280 80a9cec2e51e5cc98f615bcd704a05d2 275 SUPERFAMILY SSF51569 6 272 1.57E-45 T 10-03-2017 CpPa04_RS08280 80a9cec2e51e5cc98f615bcd704a05d2 275 PIRSF PIRSF001365 1 275 4.2E-44 T 10-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CpPa04_RS03680 b550ec0a0e3231933e58826f633f970b 296 Hamap MF_01482 Mycothiol S-conjugate amidase [mca]. 7 287 49.772 T 10-03-2017 IPR017811 Mycothiol S-conjugate amidase Mca GO:0010126 KEGG: 00311+3.5.1.11 CpPa04_RS03680 b550ec0a0e3231933e58826f633f970b 296 SUPERFAMILY SSF102588 3 287 2.22E-73 T 10-03-2017 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 CpPa04_RS03680 b550ec0a0e3231933e58826f633f970b 296 Gene3D G3DSA:3.40.50.10320 3 290 3.1E-85 T 10-03-2017 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 CpPa04_RS03680 b550ec0a0e3231933e58826f633f970b 296 TIGRFAM TIGR03446 mycothiol_Mca: mycothiol conjugate amidase Mca 4 286 5.4E-147 T 10-03-2017 IPR017811 Mycothiol S-conjugate amidase Mca GO:0010126 KEGG: 00311+3.5.1.11 CpPa04_RS03680 b550ec0a0e3231933e58826f633f970b 296 Pfam PF02585 GlcNAc-PI de-N-acetylase 7 152 1.5E-26 T 10-03-2017 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 CpPa04_RS01900 fa0d0ab18b7e820d075217a6a4333c24 208 SUPERFAMILY SSF54211 109 189 2.53E-23 T 10-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CpPa04_RS01900 fa0d0ab18b7e820d075217a6a4333c24 208 Pfam PF00333 Ribosomal protein S5, N-terminal domain 43 105 7.3E-28 T 10-03-2017 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 CpPa04_RS01900 fa0d0ab18b7e820d075217a6a4333c24 208 Gene3D G3DSA:3.30.160.20 39 102 1.0E-29 T 10-03-2017 IPR014720 Double-stranded RNA-binding domain CpPa04_RS01900 fa0d0ab18b7e820d075217a6a4333c24 208 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 39 193 2.7E-67 T 10-03-2017 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CpPa04_RS01900 fa0d0ab18b7e820d075217a6a4333c24 208 ProSitePatterns PS00585 Ribosomal protein S5 signature. 58 90 - T 10-03-2017 IPR018192 Ribosomal protein S5, N-terminal, conserved site CpPa04_RS01900 fa0d0ab18b7e820d075217a6a4333c24 208 SUPERFAMILY SSF54768 38 106 8.27E-23 T 10-03-2017 CpPa04_RS01900 fa0d0ab18b7e820d075217a6a4333c24 208 Pfam PF03719 Ribosomal protein S5, C-terminal domain 117 187 3.1E-27 T 10-03-2017 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 CpPa04_RS01900 fa0d0ab18b7e820d075217a6a4333c24 208 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 20 193 34.282 T 10-03-2017 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CpPa04_RS01900 fa0d0ab18b7e820d075217a6a4333c24 208 Gene3D G3DSA:3.30.230.10 107 189 7.6E-30 T 10-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CpPa04_RS01545 f8d7837e2b6fe3544e0d71881a863b9f 425 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 163 178 1.4E-10 T 10-03-2017 CpPa04_RS01545 f8d7837e2b6fe3544e0d71881a863b9f 425 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 11 33 1.4E-10 T 10-03-2017 CpPa04_RS01545 f8d7837e2b6fe3544e0d71881a863b9f 425 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 309 1.4E-10 T 10-03-2017 CpPa04_RS01545 f8d7837e2b6fe3544e0d71881a863b9f 425 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 309 325 1.4E-10 T 10-03-2017 CpPa04_RS01545 f8d7837e2b6fe3544e0d71881a863b9f 425 Pfam PF01494 FAD binding domain 10 325 7.9E-17 T 10-03-2017 IPR002938 FAD-binding domain GO:0071949 CpPa04_RS01545 f8d7837e2b6fe3544e0d71881a863b9f 425 Gene3D G3DSA:3.30.9.10 174 330 1.1E-44 T 10-03-2017 CpPa04_RS01545 f8d7837e2b6fe3544e0d71881a863b9f 425 Gene3D G3DSA:3.50.50.60 80 173 2.1E-16 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS01545 f8d7837e2b6fe3544e0d71881a863b9f 425 Gene3D G3DSA:3.50.50.60 9 26 2.1E-16 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS01545 f8d7837e2b6fe3544e0d71881a863b9f 425 TIGRFAM TIGR02032 GG-red-SF: geranylgeranyl reductase family 11 326 1.6E-73 T 10-03-2017 IPR011777 Geranylgeranyl reductase family GO:0016628|GO:0055114 CpPa04_RS01545 f8d7837e2b6fe3544e0d71881a863b9f 425 SUPERFAMILY SSF51905 10 184 1.83E-39 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS01545 f8d7837e2b6fe3544e0d71881a863b9f 425 SUPERFAMILY SSF51905 281 354 1.83E-39 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS01545 f8d7837e2b6fe3544e0d71881a863b9f 425 Gene3D G3DSA:3.40.50.720 27 78 3.2E-4 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS02860 a2f6dc201daae71d8317b9880da1fd09 1332 SUPERFAMILY SSF51161 712 814 8.73E-17 T 10-03-2017 IPR011004 Trimeric LpxA-like CpPa04_RS02860 a2f6dc201daae71d8317b9880da1fd09 1332 Gene3D G3DSA:3.30.300.30 402 502 6.1E-20 T 10-03-2017 CpPa04_RS02860 a2f6dc201daae71d8317b9880da1fd09 1332 Gene3D G3DSA:3.40.50.980 192 322 3.1E-35 T 10-03-2017 CpPa04_RS02860 a2f6dc201daae71d8317b9880da1fd09 1332 Gene3D G3DSA:1.10.1200.10 508 586 1.1E-13 T 10-03-2017 IPR009081 Phosphopantetheine binding ACP domain CpPa04_RS02860 a2f6dc201daae71d8317b9880da1fd09 1332 SUPERFAMILY SSF56801 22 509 2.62E-105 T 10-03-2017 CpPa04_RS02860 a2f6dc201daae71d8317b9880da1fd09 1332 SUPERFAMILY SSF51161 861 1047 3.05E-11 T 10-03-2017 IPR011004 Trimeric LpxA-like CpPa04_RS02860 a2f6dc201daae71d8317b9880da1fd09 1332 Pfam PF00501 AMP-binding enzyme 33 407 1.1E-65 T 10-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CpPa04_RS02860 a2f6dc201daae71d8317b9880da1fd09 1332 SMART SM00823 Phosphopantetheine attachment site 516 584 0.0021 T 10-03-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CpPa04_RS02860 a2f6dc201daae71d8317b9880da1fd09 1332 Pfam PF00550 Phosphopantetheine attachment site 517 580 1.7E-8 T 10-03-2017 IPR009081 Phosphopantetheine binding ACP domain CpPa04_RS02860 a2f6dc201daae71d8317b9880da1fd09 1332 SUPERFAMILY SSF47336 510 580 2.59E-11 T 10-03-2017 IPR009081 Phosphopantetheine binding ACP domain CpPa04_RS02860 a2f6dc201daae71d8317b9880da1fd09 1332 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 1256 1288 2.5E-4 T 10-03-2017 IPR001451 Hexapeptide repeat CpPa04_RS02860 a2f6dc201daae71d8317b9880da1fd09 1332 Gene3D G3DSA:2.160.10.10 676 816 2.3E-16 T 10-03-2017 CpPa04_RS02860 a2f6dc201daae71d8317b9880da1fd09 1332 Gene3D G3DSA:3.40.50.980 23 179 4.9E-32 T 10-03-2017 CpPa04_RS02860 a2f6dc201daae71d8317b9880da1fd09 1332 SUPERFAMILY SSF51161 1195 1307 2.36E-18 T 10-03-2017 IPR011004 Trimeric LpxA-like CpPa04_RS02860 a2f6dc201daae71d8317b9880da1fd09 1332 TIGRFAM TIGR02353 NRPS_term_dom: non-ribosomal peptide synthetase terminal domain of unknown function 603 1304 9.4E-154 T 10-03-2017 IPR012728 Non-ribosomal peptide synthetase, C-terminal CpPa04_RS02860 a2f6dc201daae71d8317b9880da1fd09 1332 Gene3D G3DSA:2.30.38.10 323 397 2.4E-13 T 10-03-2017 CpPa04_RS02860 a2f6dc201daae71d8317b9880da1fd09 1332 ProSitePatterns PS00455 Putative AMP-binding domain signature. 156 167 - T 10-03-2017 IPR020845 AMP-binding, conserved site CpPa04_RS02860 a2f6dc201daae71d8317b9880da1fd09 1332 Gene3D G3DSA:2.160.10.10 953 1001 8.4E-28 T 10-03-2017 CpPa04_RS02860 a2f6dc201daae71d8317b9880da1fd09 1332 Gene3D G3DSA:2.160.10.10 1224 1308 8.4E-28 T 10-03-2017 CpPa04_RS03180 e6d5635034744942894d054f575d2e91 480 Pfam PF00005 ABC transporter 272 434 6.1E-26 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS03180 e6d5635034744942894d054f575d2e91 480 Pfam PF00005 ABC transporter 28 168 7.6E-22 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS03180 e6d5635034744942894d054f575d2e91 480 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS03180 e6d5635034744942894d054f575d2e91 480 SUPERFAMILY SSF52540 21 213 1.13E-41 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03180 e6d5635034744942894d054f575d2e91 480 SMART SM00382 31 216 2.7E-14 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS03180 e6d5635034744942894d054f575d2e91 480 SMART SM00382 279 479 5.6E-17 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS03180 e6d5635034744942894d054f575d2e91 480 Gene3D G3DSA:3.40.50.300 252 473 4.3E-52 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03180 e6d5635034744942894d054f575d2e91 480 Gene3D G3DSA:3.40.50.300 11 210 4.9E-42 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03180 e6d5635034744942894d054f575d2e91 480 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS03180 e6d5635034744942894d054f575d2e91 480 SUPERFAMILY SSF52540 256 473 7.31E-45 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS10165 30f091cfc05905359285c3c63c84b8ef 452 Pfam PF09594 Protein of unknown function (DUF2029) 92 326 1.7E-56 T 10-03-2017 IPR018584 Glycosyltransferase family 87 GO:0016758 CpPa04_RS01500 17d42dc9711b6924a362fe803223ff34 375 Gene3D G3DSA:3.40.50.980 58 216 1.4E-20 T 10-03-2017 CpPa04_RS01500 17d42dc9711b6924a362fe803223ff34 375 Gene3D G3DSA:3.30.300.30 278 371 1.6E-13 T 10-03-2017 CpPa04_RS01500 17d42dc9711b6924a362fe803223ff34 375 Pfam PF00501 AMP-binding enzyme 53 282 3.9E-29 T 10-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CpPa04_RS01500 17d42dc9711b6924a362fe803223ff34 375 SUPERFAMILY SSF56801 56 372 3.01E-59 T 10-03-2017 CpPa04_RS01500 17d42dc9711b6924a362fe803223ff34 375 Gene3D G3DSA:2.30.38.10 217 276 6.0E-7 T 10-03-2017 CpPa04_RS05205 26b8dd622b834a1c92e0cb396d846a11 216 Gene3D G3DSA:3.40.50.10230 3 209 8.2E-80 T 10-03-2017 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 CpPa04_RS05205 26b8dd622b834a1c92e0cb396d846a11 216 Pfam PF02570 Precorrin-8X methylmutase 11 210 3.7E-74 T 10-03-2017 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 CpPa04_RS05205 26b8dd622b834a1c92e0cb396d846a11 216 SUPERFAMILY SSF63965 3 210 1.02E-71 T 10-03-2017 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 CpPa04_RS07260 777e183348638e4591051e34ad551114 184 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 3 180 2.1E-47 T 10-03-2017 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CpPa04_RS07260 777e183348638e4591051e34ad551114 184 Gene3D G3DSA:3.40.50.300 3 181 5.5E-46 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07260 777e183348638e4591051e34ad551114 184 SUPERFAMILY SSF52540 3 181 4.59E-35 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07260 777e183348638e4591051e34ad551114 184 PIRSF PIRSF006135 1 183 1.7E-49 T 10-03-2017 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CpPa04_RS05010 ec4763b0afe996158d3332440b1d7ac0 322 Pfam PF01032 FecCD transport family 3 312 2.0E-66 T 10-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CpPa04_RS05010 ec4763b0afe996158d3332440b1d7ac0 322 Gene3D G3DSA:1.10.3470.10 2 316 8.1E-73 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS05010 ec4763b0afe996158d3332440b1d7ac0 322 SUPERFAMILY SSF81345 9 313 3.92E-60 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS10295 b7dd980b6850f3e0c3c96798547a3fa0 450 Pfam PF00083 Sugar (and other) transporter 63 449 1.1E-55 T 10-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CpPa04_RS10295 b7dd980b6850f3e0c3c96798547a3fa0 450 Gene3D G3DSA:1.20.1250.20 28 215 8.8E-29 T 10-03-2017 CpPa04_RS10295 b7dd980b6850f3e0c3c96798547a3fa0 450 Gene3D G3DSA:1.20.1250.20 256 446 8.5E-22 T 10-03-2017 CpPa04_RS10295 b7dd980b6850f3e0c3c96798547a3fa0 450 SUPERFAMILY SSF103473 15 448 8.37E-84 T 10-03-2017 IPR020846 Major facilitator superfamily domain CpPa04_RS10295 b7dd980b6850f3e0c3c96798547a3fa0 450 ProSitePatterns PS00217 Sugar transport proteins signature 2. 126 151 - T 10-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CpPa04_RS10295 b7dd980b6850f3e0c3c96798547a3fa0 450 ProSitePatterns PS00216 Sugar transport proteins signature 1. 84 100 - T 10-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CpPa04_RS10605 eecab5d1387e2d072511a8b545466d6c 135 Pfam PF00355 Rieske [2Fe-2S] domain 50 120 6.3E-11 T 10-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CpPa04_RS10605 eecab5d1387e2d072511a8b545466d6c 135 SUPERFAMILY SSF50022 45 132 7.59E-18 T 10-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CpPa04_RS10605 eecab5d1387e2d072511a8b545466d6c 135 Gene3D G3DSA:2.102.10.10 14 132 8.9E-18 T 10-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CpPa04_RS04045 d7368dc87e42b313768431bb787c866c 430 Pfam PF00571 CBS domain 287 349 0.002 T 10-03-2017 IPR000644 CBS domain CpPa04_RS04045 d7368dc87e42b313768431bb787c866c 430 Gene3D G3DSA:3.10.580.10 286 411 4.3E-16 T 10-03-2017 CpPa04_RS04045 d7368dc87e42b313768431bb787c866c 430 SUPERFAMILY SSF50346 6 79 6.67E-8 T 10-03-2017 IPR011033 PRC-barrel-like CpPa04_RS04045 d7368dc87e42b313768431bb787c866c 430 Pfam PF03448 MgtE intracellular N domain 184 285 1.3E-27 T 10-03-2017 IPR006668 Magnesium transporter, MgtE intracellular domain CpPa04_RS04045 d7368dc87e42b313768431bb787c866c 430 Gene3D G3DSA:1.25.60.10 173 282 2.3E-38 T 10-03-2017 CpPa04_RS04045 d7368dc87e42b313768431bb787c866c 430 SUPERFAMILY SSF54631 286 417 6.34E-23 T 10-03-2017 CpPa04_RS04045 d7368dc87e42b313768431bb787c866c 430 SMART SM00924 184 287 9.0E-35 T 10-03-2017 IPR006668 Magnesium transporter, MgtE intracellular domain CpPa04_RS04045 d7368dc87e42b313768431bb787c866c 430 SUPERFAMILY SSF158791 175 283 3.01E-30 T 10-03-2017 CpPa04_RS04315 7f3bf782906977cce68f55a6303421c3 481 SUPERFAMILY SSF52540 94 365 2.83E-85 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04315 7f3bf782906977cce68f55a6303421c3 481 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 16 477 5.6E-239 T 10-03-2017 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 CpPa04_RS04315 7f3bf782906977cce68f55a6303421c3 481 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 351 360 - T 10-03-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CpPa04_RS04315 7f3bf782906977cce68f55a6303421c3 481 Gene3D G3DSA:3.40.50.300 93 362 4.8E-100 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04315 7f3bf782906977cce68f55a6303421c3 481 Gene3D G3DSA:2.40.10.170 8 92 1.0E-29 T 10-03-2017 CpPa04_RS04315 7f3bf782906977cce68f55a6303421c3 481 SUPERFAMILY SSF47917 363 479 5.23E-48 T 10-03-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CpPa04_RS04315 7f3bf782906977cce68f55a6303421c3 481 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 19 90 4.9E-21 T 10-03-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CpPa04_RS04315 7f3bf782906977cce68f55a6303421c3 481 SUPERFAMILY SSF50615 16 92 2.17E-24 T 10-03-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CpPa04_RS04315 7f3bf782906977cce68f55a6303421c3 481 Gene3D G3DSA:1.10.1140.10 364 479 2.0E-47 T 10-03-2017 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CpPa04_RS04315 7f3bf782906977cce68f55a6303421c3 481 Hamap MF_01347 ATP synthase subunit beta [atpB]. 14 478 54.261 T 10-03-2017 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 CpPa04_RS04315 7f3bf782906977cce68f55a6303421c3 481 SMART SM00382 159 408 4.0E-6 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS04315 7f3bf782906977cce68f55a6303421c3 481 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 147 360 5.7E-64 T 10-03-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CpPa04_RS08735 e392385ab4a34918b62fb14ace915c48 304 Gene3D G3DSA:3.40.630.30 150 294 2.2E-21 T 10-03-2017 IPR016181 Acyl-CoA N-acyltransferase CpPa04_RS08735 e392385ab4a34918b62fb14ace915c48 304 Gene3D G3DSA:3.40.630.30 17 96 1.0E-6 T 10-03-2017 IPR016181 Acyl-CoA N-acyltransferase CpPa04_RS08735 e392385ab4a34918b62fb14ace915c48 304 Pfam PF00583 Acetyltransferase (GNAT) family 211 289 8.1E-12 T 10-03-2017 IPR000182 GNAT domain GO:0008080 CpPa04_RS08735 e392385ab4a34918b62fb14ace915c48 304 Pfam PF00583 Acetyltransferase (GNAT) family 68 95 5.0E-5 T 10-03-2017 IPR000182 GNAT domain GO:0008080 CpPa04_RS08735 e392385ab4a34918b62fb14ace915c48 304 Hamap MF_01698 Mycothiol acetyltransferase [mshD]. 4 300 29.923 T 10-03-2017 IPR017813 Mycothiol acetyltransferase GO:0016747 CpPa04_RS08735 e392385ab4a34918b62fb14ace915c48 304 TIGRFAM TIGR03448 mycothiol_MshD: mycothiol synthase 8 298 3.0E-86 T 10-03-2017 IPR017813 Mycothiol acetyltransferase GO:0016747 CpPa04_RS08735 e392385ab4a34918b62fb14ace915c48 304 PIRSF PIRSF021524 2 304 2.8E-75 T 10-03-2017 IPR017813 Mycothiol acetyltransferase GO:0016747 CpPa04_RS08735 e392385ab4a34918b62fb14ace915c48 304 SUPERFAMILY SSF55729 13 293 7.38E-34 T 10-03-2017 IPR016181 Acyl-CoA N-acyltransferase CpPa04_RS02020 84edf735bff9b52ae0f27638011e6ed1 291 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 8 265 32.102 T 10-03-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CpPa04_RS02020 84edf735bff9b52ae0f27638011e6ed1 291 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 10 259 1.4E-48 T 10-03-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CpPa04_RS02020 84edf735bff9b52ae0f27638011e6ed1 291 SUPERFAMILY SSF55120 7 269 4.32E-72 T 10-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CpPa04_RS02020 84edf735bff9b52ae0f27638011e6ed1 291 Gene3D G3DSA:3.30.70.580 7 121 2.3E-34 T 10-03-2017 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CpPa04_RS02020 84edf735bff9b52ae0f27638011e6ed1 291 Gene3D G3DSA:3.30.70.660 123 263 3.8E-35 T 10-03-2017 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CpPa04_RS02020 84edf735bff9b52ae0f27638011e6ed1 291 PIRSF PIRSF001430 7 282 5.0E-73 T 10-03-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CpPa04_RS02020 84edf735bff9b52ae0f27638011e6ed1 291 Pfam PF01416 tRNA pseudouridine synthase 160 266 3.2E-22 T 10-03-2017 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CpPa04_RS02020 84edf735bff9b52ae0f27638011e6ed1 291 Pfam PF01416 tRNA pseudouridine synthase 15 82 1.6E-8 T 10-03-2017 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CpPa04_RS02220 ded61d5dcfda5f5688f8623e9d1f2943 225 Gene3D G3DSA:1.10.3720.10 16 224 2.3E-34 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS02220 ded61d5dcfda5f5688f8623e9d1f2943 225 SUPERFAMILY SSF161098 16 209 2.88E-38 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS02220 ded61d5dcfda5f5688f8623e9d1f2943 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 222 4.7E-14 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS09075 a9b434d122a905d9e057d0505b797da3 501 Pfam PF00171 Aldehyde dehydrogenase family 29 487 8.4E-167 T 10-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CpPa04_RS09075 a9b434d122a905d9e057d0505b797da3 501 SUPERFAMILY SSF53720 21 491 3.4E-162 T 10-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CpPa04_RS09075 a9b434d122a905d9e057d0505b797da3 501 Gene3D G3DSA:3.40.605.10 21 277 3.8E-92 T 10-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CpPa04_RS09075 a9b434d122a905d9e057d0505b797da3 501 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 263 270 - T 10-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CpPa04_RS09075 a9b434d122a905d9e057d0505b797da3 501 Gene3D G3DSA:3.40.309.10 278 462 3.9E-69 T 10-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CpPa04_RS09075 a9b434d122a905d9e057d0505b797da3 501 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 291 302 - T 10-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CpPa04_RS06685 56640b4bd40c4496d58a7fd90a9eca97 133 Gene3D G3DSA:3.40.1350.10 24 128 8.2E-27 T 10-03-2017 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 CpPa04_RS06685 56640b4bd40c4496d58a7fd90a9eca97 133 SUPERFAMILY SSF52980 19 116 1.61E-14 T 10-03-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CpPa04_RS06685 56640b4bd40c4496d58a7fd90a9eca97 133 Pfam PF02021 Uncharacterised protein family UPF0102 24 112 1.5E-22 T 10-03-2017 IPR003509 Uncharacterised protein family UPF0102 CpPa04_RS06685 56640b4bd40c4496d58a7fd90a9eca97 133 Hamap MF_00048 UPF0102 protein YraN [yraN]. 17 125 18.949 T 10-03-2017 IPR003509 Uncharacterised protein family UPF0102 CpPa04_RS06840 389b2dfc7e35ffc5f89c136ee016182b 117 Pfam PF04134 Protein of unknown function, DUF393 4 104 8.6E-8 T 10-03-2017 IPR007263 Protein of unknown function DUF393 CpPa04_RS04370 ea4392f5d18a0b1b6b7ccaae1ff5325e 268 Gene3D G3DSA:3.90.79.10 16 63 3.9E-15 T 10-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CpPa04_RS04370 ea4392f5d18a0b1b6b7ccaae1ff5325e 268 Gene3D G3DSA:3.90.79.10 96 111 3.9E-15 T 10-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CpPa04_RS04370 ea4392f5d18a0b1b6b7ccaae1ff5325e 268 Gene3D G3DSA:3.90.79.10 154 205 3.9E-15 T 10-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CpPa04_RS04370 ea4392f5d18a0b1b6b7ccaae1ff5325e 268 SUPERFAMILY SSF55811 14 63 6.43E-15 T 10-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CpPa04_RS04370 ea4392f5d18a0b1b6b7ccaae1ff5325e 268 SUPERFAMILY SSF55811 150 223 6.43E-15 T 10-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CpPa04_RS04370 ea4392f5d18a0b1b6b7ccaae1ff5325e 268 SUPERFAMILY SSF55811 96 107 6.43E-15 T 10-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CpPa04_RS10210 65b7790e3257392f439b301eee1720a1 211 SUPERFAMILY SSF48498 94 202 6.14E-5 T 10-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CpPa04_RS10210 65b7790e3257392f439b301eee1720a1 211 Gene3D G3DSA:1.10.357.10 23 202 1.1E-23 T 10-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CpPa04_RS10210 65b7790e3257392f439b301eee1720a1 211 SUPERFAMILY SSF46689 14 96 5.64E-15 T 10-03-2017 IPR009057 Homeodomain-like GO:0003677 CpPa04_RS10210 65b7790e3257392f439b301eee1720a1 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 8.8E-7 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS10210 65b7790e3257392f439b301eee1720a1 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 8.8E-7 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS10210 65b7790e3257392f439b301eee1720a1 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 71 8.7E-11 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS09465 ffe8a7052c5a9fc9b6e872f7dcad4fef 1269 SUPERFAMILY SSF117074 799 880 4.71E-12 T 10-03-2017 CpPa04_RS09465 ffe8a7052c5a9fc9b6e872f7dcad4fef 1269 TIGRFAM TIGR04225 CshA_fibril_rpt: CshA-type fibril repeat 1093 1159 1.1E-10 T 10-03-2017 IPR026395 CshA-type fibril repeat CpPa04_RS09465 ffe8a7052c5a9fc9b6e872f7dcad4fef 1269 TIGRFAM TIGR04225 CshA_fibril_rpt: CshA-type fibril repeat 930 1044 1.5E-14 T 10-03-2017 IPR026395 CshA-type fibril repeat CpPa04_RS09465 ffe8a7052c5a9fc9b6e872f7dcad4fef 1269 Gene3D G3DSA:2.60.40.10 820 893 2.3E-13 T 10-03-2017 IPR013783 Immunoglobulin-like fold CpPa04_RS09465 ffe8a7052c5a9fc9b6e872f7dcad4fef 1269 Gene3D G3DSA:2.60.40.10 559 631 1.3E-15 T 10-03-2017 IPR013783 Immunoglobulin-like fold CpPa04_RS09465 ffe8a7052c5a9fc9b6e872f7dcad4fef 1269 Gene3D G3DSA:2.60.40.10 698 765 1.7E-16 T 10-03-2017 IPR013783 Immunoglobulin-like fold CpPa04_RS09465 ffe8a7052c5a9fc9b6e872f7dcad4fef 1269 SUPERFAMILY SSF117074 676 762 2.88E-16 T 10-03-2017 CpPa04_RS09465 ffe8a7052c5a9fc9b6e872f7dcad4fef 1269 SUPERFAMILY SSF117074 554 633 3.27E-17 T 10-03-2017 CpPa04_RS09465 ffe8a7052c5a9fc9b6e872f7dcad4fef 1269 Pfam PF05738 Cna protein B-type domain 718 784 5.5E-9 T 10-03-2017 IPR008454 Collagen-binding surface protein Cna-like, B-type domain CpPa04_RS09465 ffe8a7052c5a9fc9b6e872f7dcad4fef 1269 Pfam PF05738 Cna protein B-type domain 578 626 1.6E-8 T 10-03-2017 IPR008454 Collagen-binding surface protein Cna-like, B-type domain CpPa04_RS00995 f13b59566f6431dd43d7d7ff8ca0a88a 468 SUPERFAMILY SSF50939 160 284 7.85E-8 T 10-03-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 CpPa04_RS00995 f13b59566f6431dd43d7d7ff8ca0a88a 468 Gene3D G3DSA:2.120.10.10 160 322 2.5E-5 T 10-03-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 CpPa04_RS00995 f13b59566f6431dd43d7d7ff8ca0a88a 468 Pfam PF13810 Domain of unknown function (DUF4185) 86 391 8.4E-54 T 10-03-2017 IPR025442 Domain of unknown function DUF4185 CpPa04_RS10600 47b9d1553c388449be2f5594022ff4c2 279 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 247 3.1E-84 T 10-03-2017 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CpPa04_RS10600 47b9d1553c388449be2f5594022ff4c2 279 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 276 35.626 T 10-03-2017 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CpPa04_RS10600 47b9d1553c388449be2f5594022ff4c2 279 Pfam PF00290 Tryptophan synthase alpha chain 8 246 4.7E-77 T 10-03-2017 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CpPa04_RS10600 47b9d1553c388449be2f5594022ff4c2 279 Gene3D G3DSA:3.20.20.70 1 278 8.9E-90 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS10600 47b9d1553c388449be2f5594022ff4c2 279 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 10-03-2017 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CpPa04_RS10600 47b9d1553c388449be2f5594022ff4c2 279 SUPERFAMILY SSF51366 1 248 6.78E-79 T 10-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CpPa04_RS02025 a6132572abd4493af6cdc76d3e049588 445 Pfam PF05108 Type VII secretion system ESX-1, transport TM domain B 273 442 1.0E-11 T 10-03-2017 IPR007795 Type VII secretion system EccB CpPa04_RS02025 a6132572abd4493af6cdc76d3e049588 445 Pfam PF05108 Type VII secretion system ESX-1, transport TM domain B 20 262 1.2E-46 T 10-03-2017 IPR007795 Type VII secretion system EccB CpPa04_RS02025 a6132572abd4493af6cdc76d3e049588 445 TIGRFAM TIGR03919 T7SS_EccB: type VII secretion protein EccB 22 436 2.0E-70 T 10-03-2017 IPR007795 Type VII secretion system EccB CpPa04_RS07675 e3acecb2e692b6ec1093366845bc642b 424 SMART SM00471 62 225 6.6E-14 T 10-03-2017 IPR003607 HD/PDEase domain CpPa04_RS07675 e3acecb2e692b6ec1093366845bc642b 424 Pfam PF13286 Phosphohydrolase-associated domain 323 413 7.4E-19 T 10-03-2017 IPR026875 Phosphohydrolase-associated domain CpPa04_RS07675 e3acecb2e692b6ec1093366845bc642b 424 Gene3D G3DSA:1.10.3210.10 18 211 6.2E-63 T 10-03-2017 IPR006674 HD domain CpPa04_RS07675 e3acecb2e692b6ec1093366845bc642b 424 Pfam PF01966 HD domain 66 141 6.8E-15 T 10-03-2017 IPR006674 HD domain CpPa04_RS07675 e3acecb2e692b6ec1093366845bc642b 424 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 29 406 4.0E-76 T 10-03-2017 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 CpPa04_RS07675 e3acecb2e692b6ec1093366845bc642b 424 Gene3D G3DSA:1.10.3410.10 212 344 6.2E-16 T 10-03-2017 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain CpPa04_RS07675 e3acecb2e692b6ec1093366845bc642b 424 SUPERFAMILY SSF109604 196 242 1.65E-56 T 10-03-2017 CpPa04_RS07675 e3acecb2e692b6ec1093366845bc642b 424 SUPERFAMILY SSF109604 28 166 1.65E-56 T 10-03-2017 CpPa04_RS07675 e3acecb2e692b6ec1093366845bc642b 424 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 1 417 30.521 T 10-03-2017 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 CpPa04_RS00410 22a3c82069c5544125863e2ac74d9f74 271 SUPERFAMILY SSF52794 180 269 1.18E-12 T 10-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CpPa04_RS00410 22a3c82069c5544125863e2ac74d9f74 271 Gene3D G3DSA:3.40.50.270 180 268 5.2E-9 T 10-03-2017 CpPa04_RS00410 22a3c82069c5544125863e2ac74d9f74 271 Gene3D G3DSA:3.40.930.10 2 148 1.2E-44 T 10-03-2017 IPR002178 PTS EIIA type-2 domain CpPa04_RS00410 22a3c82069c5544125863e2ac74d9f74 271 SUPERFAMILY SSF55804 2 148 4.58E-32 T 10-03-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CpPa04_RS00410 22a3c82069c5544125863e2ac74d9f74 271 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 148 1.2E-28 T 10-03-2017 IPR002178 PTS EIIA type-2 domain CpPa04_RS00410 22a3c82069c5544125863e2ac74d9f74 271 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 180 255 7.6E-8 T 10-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CpPa04_RS10400 0ff70574d80c44502c05679791c04e07 173 Pfam PF04892 VanZ like family 17 143 2.0E-21 T 10-03-2017 IPR006976 VanZ-like CpPa04_RS03060 ca3a345aff2a26bd0df405e572bd1b91 290 Gene3D G3DSA:3.40.1280.10 128 287 4.7E-40 T 10-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CpPa04_RS03060 ca3a345aff2a26bd0df405e572bd1b91 290 Gene3D G3DSA:3.30.1330.30 15 117 2.3E-9 T 10-03-2017 IPR029064 50S ribosomal protein L30e-like CpPa04_RS03060 ca3a345aff2a26bd0df405e572bd1b91 290 SUPERFAMILY SSF75217 127 289 2.75E-33 T 10-03-2017 IPR029028 Alpha/beta knot methyltransferases CpPa04_RS03060 ca3a345aff2a26bd0df405e572bd1b91 290 SUPERFAMILY SSF55315 14 117 9.89E-12 T 10-03-2017 IPR029064 50S ribosomal protein L30e-like CpPa04_RS03060 ca3a345aff2a26bd0df405e572bd1b91 290 Pfam PF00588 SpoU rRNA Methylase family 133 283 1.1E-26 T 10-03-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CpPa04_RS00735 36fb4b73da236f275207c42ad5968744 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 10-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CpPa04_RS00735 36fb4b73da236f275207c42ad5968744 249 Gene3D G3DSA:3.40.50.720 3 247 8.4E-80 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS00735 36fb4b73da236f275207c42ad5968744 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.0E-10 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS00735 36fb4b73da236f275207c42ad5968744 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.0E-10 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS00735 36fb4b73da236f275207c42ad5968744 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.0E-10 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS00735 36fb4b73da236f275207c42ad5968744 249 SUPERFAMILY SSF51735 8 247 1.07E-74 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS00735 36fb4b73da236f275207c42ad5968744 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 4.5E-38 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS00735 36fb4b73da236f275207c42ad5968744 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.5E-38 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS00735 36fb4b73da236f275207c42ad5968744 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 4.5E-38 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS00735 36fb4b73da236f275207c42ad5968744 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.5E-38 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS00735 36fb4b73da236f275207c42ad5968744 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.5E-38 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS00735 36fb4b73da236f275207c42ad5968744 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 4.5E-38 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS00735 36fb4b73da236f275207c42ad5968744 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 246 1.1E-55 T 10-03-2017 CpPa04_RS02975 f685d9fdcaec31695d9cd629973ec8ac 352 SUPERFAMILY SSF81345 28 348 4.32E-56 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS02975 f685d9fdcaec31695d9cd629973ec8ac 352 Gene3D G3DSA:1.10.3470.10 30 350 1.3E-50 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS02975 f685d9fdcaec31695d9cd629973ec8ac 352 Pfam PF01032 FecCD transport family 64 348 1.0E-47 T 10-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CpPa04_RS06940 894900d7630936abedef3504043539fe 205 Gene3D G3DSA:1.10.357.10 73 202 1.3E-14 T 10-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CpPa04_RS06940 894900d7630936abedef3504043539fe 205 Gene3D G3DSA:1.10.10.60 2 62 2.0E-22 T 10-03-2017 IPR009057 Homeodomain-like GO:0003677 CpPa04_RS06940 894900d7630936abedef3504043539fe 205 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 51 - T 10-03-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CpPa04_RS06940 894900d7630936abedef3504043539fe 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 6.4E-9 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS06940 894900d7630936abedef3504043539fe 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 6.4E-9 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS06940 894900d7630936abedef3504043539fe 205 SUPERFAMILY SSF46689 2 61 1.75E-14 T 10-03-2017 IPR009057 Homeodomain-like GO:0003677 CpPa04_RS06940 894900d7630936abedef3504043539fe 205 SUPERFAMILY SSF48498 73 203 3.56E-9 T 10-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CpPa04_RS06940 894900d7630936abedef3504043539fe 205 PRINTS PR00400 Tetracycline repressor protein signature 186 200 6.9E-7 T 10-03-2017 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CpPa04_RS06940 894900d7630936abedef3504043539fe 205 PRINTS PR00400 Tetracycline repressor protein signature 20 43 6.9E-7 T 10-03-2017 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CpPa04_RS06940 894900d7630936abedef3504043539fe 205 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 73 202 7.7E-6 T 10-03-2017 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 CpPa04_RS06940 894900d7630936abedef3504043539fe 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 53 4.2E-13 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS07875 2606dcbfbd428df440fb71ae462f8172 287 SUPERFAMILY SSF161098 69 256 2.75E-22 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS07875 2606dcbfbd428df440fb71ae462f8172 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 274 7.2E-27 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS07875 2606dcbfbd428df440fb71ae462f8172 287 Gene3D G3DSA:1.10.3720.10 65 272 1.0E-20 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS02495 1f6c31c6db4fb09e177b508266371d32 281 SUPERFAMILY SSF55681 40 221 1.66E-43 T 10-03-2017 CpPa04_RS02495 1f6c31c6db4fb09e177b508266371d32 281 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 42 275 1.5E-40 T 10-03-2017 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CpPa04_RS02495 1f6c31c6db4fb09e177b508266371d32 281 Gene3D G3DSA:3.30.930.10 37 226 4.9E-51 T 10-03-2017 CpPa04_RS02495 1f6c31c6db4fb09e177b508266371d32 281 Pfam PF03099 Biotin/lipoate A/B protein ligase family 65 168 6.7E-8 T 10-03-2017 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CpPa04_RS02495 1f6c31c6db4fb09e177b508266371d32 281 SUPERFAMILY SSF50037 232 275 1.92E-6 T 10-03-2017 IPR008988 Transcriptional repressor, C-terminal CpPa04_RS06425 d2269f820ec3c5a7aad8538adb1c497c 683 SUPERFAMILY SSF56281 120 535 6.16E-85 T 10-03-2017 IPR001279 Metallo-beta-lactamase CpPa04_RS06425 d2269f820ec3c5a7aad8538adb1c497c 683 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 472 514 1.2E-6 T 10-03-2017 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CpPa04_RS06425 d2269f820ec3c5a7aad8538adb1c497c 683 Hamap MF_01491 Ribonuclease J [rnj]. 115 664 40.281 T 10-03-2017 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 CpPa04_RS06425 d2269f820ec3c5a7aad8538adb1c497c 683 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 475 503 - T 10-03-2017 IPR001587 Ribonuclease J, conserved site CpPa04_RS06425 d2269f820ec3c5a7aad8538adb1c497c 683 Pfam PF12706 Beta-lactamase superfamily domain 171 276 8.2E-11 T 10-03-2017 IPR001279 Metallo-beta-lactamase CpPa04_RS06425 d2269f820ec3c5a7aad8538adb1c497c 683 SMART SM00849 132 326 8.1E-23 T 10-03-2017 IPR001279 Metallo-beta-lactamase CpPa04_RS06425 d2269f820ec3c5a7aad8538adb1c497c 683 Gene3D G3DSA:3.60.15.10 117 365 3.6E-72 T 10-03-2017 IPR001279 Metallo-beta-lactamase CpPa04_RS06425 d2269f820ec3c5a7aad8538adb1c497c 683 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 121 661 6.1E-143 T 10-03-2017 IPR004613 Ribonuclease J GO:0003723|GO:0046872 CpPa04_RS07965 24693c35351d646d133df90925015655 324 Pfam PF06144 DNA polymerase III, delta subunit 9 172 2.9E-14 T 10-03-2017 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 CpPa04_RS07965 24693c35351d646d133df90925015655 324 SUPERFAMILY SSF52540 4 189 1.21E-12 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07965 24693c35351d646d133df90925015655 324 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 6 316 2.4E-37 T 10-03-2017 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 CpPa04_RS07965 24693c35351d646d133df90925015655 324 SUPERFAMILY SSF48019 196 319 7.65E-12 T 10-03-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CpPa04_RS07965 24693c35351d646d133df90925015655 324 Gene3D G3DSA:1.10.8.60 130 213 3.3E-11 T 10-03-2017 CpPa04_RS07965 24693c35351d646d133df90925015655 324 Gene3D G3DSA:3.40.50.300 5 101 3.1E-7 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08635 a17070788753e5f004fd3a37a0208b01 188 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 8 169 1.2E-68 T 10-03-2017 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CpPa04_RS08635 a17070788753e5f004fd3a37a0208b01 188 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 155 1.2E-8 T 10-03-2017 IPR001451 Hexapeptide repeat CpPa04_RS08635 a17070788753e5f004fd3a37a0208b01 188 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 75 111 0.0028 T 10-03-2017 IPR001451 Hexapeptide repeat CpPa04_RS08635 a17070788753e5f004fd3a37a0208b01 188 Gene3D G3DSA:1.10.3130.10 3 63 5.5E-22 T 10-03-2017 CpPa04_RS08635 a17070788753e5f004fd3a37a0208b01 188 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 129 157 - T 10-03-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CpPa04_RS08635 a17070788753e5f004fd3a37a0208b01 188 Gene3D G3DSA:2.160.10.10 64 170 4.7E-36 T 10-03-2017 CpPa04_RS08635 a17070788753e5f004fd3a37a0208b01 188 PIRSF PIRSF000441 2 185 4.9E-77 T 10-03-2017 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CpPa04_RS08635 a17070788753e5f004fd3a37a0208b01 188 SUPERFAMILY SSF51161 4 169 7.35E-56 T 10-03-2017 IPR011004 Trimeric LpxA-like CpPa04_RS00675 a99b968d95e28fe369acd141820105a3 298 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 8 298 51.799 T 10-03-2017 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 CpPa04_RS00675 a99b968d95e28fe369acd141820105a3 298 Gene3D G3DSA:3.20.20.70 196 282 3.2E-48 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS00675 a99b968d95e28fe369acd141820105a3 298 Gene3D G3DSA:3.20.20.70 28 164 3.2E-48 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS00675 a99b968d95e28fe369acd141820105a3 298 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 13 298 1.0E-143 T 10-03-2017 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 CpPa04_RS00675 a99b968d95e28fe369acd141820105a3 298 Pfam PF01680 SOR/SNZ family 11 216 1.6E-108 T 10-03-2017 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 CpPa04_RS00675 a99b968d95e28fe369acd141820105a3 298 SUPERFAMILY SSF51366 22 270 5.65E-61 T 10-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CpPa04_RS00675 a99b968d95e28fe369acd141820105a3 298 PIRSF PIRSF029271 1 298 6.6E-152 T 10-03-2017 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 CpPa04_RS02745 12b2804e720a966dc518a9a2dea54c55 1074 Pfam PF13361 UvrD-like helicase C-terminal domain 342 777 7.4E-31 T 10-03-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CpPa04_RS02745 12b2804e720a966dc518a9a2dea54c55 1074 SUPERFAMILY SSF52540 547 704 5.22E-103 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02745 12b2804e720a966dc518a9a2dea54c55 1074 SUPERFAMILY SSF52540 223 495 5.22E-103 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02745 12b2804e720a966dc518a9a2dea54c55 1074 SUPERFAMILY SSF52540 15 193 5.22E-103 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02745 12b2804e720a966dc518a9a2dea54c55 1074 SUPERFAMILY SSF52540 754 780 5.22E-103 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02745 12b2804e720a966dc518a9a2dea54c55 1074 Gene3D G3DSA:1.10.486.10 538 644 2.3E-17 T 10-03-2017 CpPa04_RS02745 12b2804e720a966dc518a9a2dea54c55 1074 Gene3D G3DSA:1.10.486.10 460 504 2.3E-17 T 10-03-2017 CpPa04_RS02745 12b2804e720a966dc518a9a2dea54c55 1074 Pfam PF00580 UvrD/REP helicase N-terminal domain 18 330 2.2E-44 T 10-03-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CpPa04_RS02745 12b2804e720a966dc518a9a2dea54c55 1074 Gene3D G3DSA:3.90.320.10 977 1036 9.7E-5 T 10-03-2017 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 CpPa04_RS02745 12b2804e720a966dc518a9a2dea54c55 1074 SUPERFAMILY SSF52980 898 1047 2.84E-9 T 10-03-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CpPa04_RS02745 12b2804e720a966dc518a9a2dea54c55 1074 Pfam PF12705 PD-(D/E)XK nuclease superfamily 908 1049 2.6E-11 T 10-03-2017 CpPa04_RS02745 12b2804e720a966dc518a9a2dea54c55 1074 Gene3D G3DSA:3.40.50.300 665 700 4.2E-41 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02745 12b2804e720a966dc518a9a2dea54c55 1074 Gene3D G3DSA:3.40.50.300 344 459 4.2E-41 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02745 12b2804e720a966dc518a9a2dea54c55 1074 Gene3D G3DSA:3.40.50.300 750 780 4.2E-41 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02745 12b2804e720a966dc518a9a2dea54c55 1074 Gene3D G3DSA:3.40.50.300 233 330 1.8E-58 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02745 12b2804e720a966dc518a9a2dea54c55 1074 Gene3D G3DSA:3.40.50.300 114 176 1.8E-58 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02745 12b2804e720a966dc518a9a2dea54c55 1074 Gene3D G3DSA:3.40.50.300 16 81 1.8E-58 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08230 be0bc57882d3bfe42aa99e659c9685d6 307 Gene3D G3DSA:3.40.50.300 2 224 7.9E-64 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08230 be0bc57882d3bfe42aa99e659c9685d6 307 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS08230 be0bc57882d3bfe42aa99e659c9685d6 307 Pfam PF00005 ABC transporter 26 163 2.4E-29 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS08230 be0bc57882d3bfe42aa99e659c9685d6 307 SMART SM00382 35 219 1.2E-16 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS08230 be0bc57882d3bfe42aa99e659c9685d6 307 SUPERFAMILY SSF52540 4 224 3.66E-58 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09520 d252e1935ee9dc8c046a9c32f4cceadf 319 TIGRFAM TIGR01076 sortase_fam: sortase 123 256 1.1E-47 T 10-03-2017 IPR005754 Sortase family CpPa04_RS09520 d252e1935ee9dc8c046a9c32f4cceadf 319 Gene3D G3DSA:2.40.260.10 117 252 2.8E-46 T 10-03-2017 IPR023365 Sortase domain CpPa04_RS09520 d252e1935ee9dc8c046a9c32f4cceadf 319 SUPERFAMILY SSF63817 110 251 1.96E-42 T 10-03-2017 IPR023365 Sortase domain CpPa04_RS09520 d252e1935ee9dc8c046a9c32f4cceadf 319 Pfam PF04203 Sortase family 126 249 6.3E-21 T 10-03-2017 IPR005754 Sortase family CpPa04_RS05390 e044ae81db662fe2448f8db84e0acb6d 215 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 10 206 1.5E-74 T 10-03-2017 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 CpPa04_RS05390 e044ae81db662fe2448f8db84e0acb6d 215 Pfam PF02734 DAK2 domain 34 206 6.8E-55 T 10-03-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CpPa04_RS05390 e044ae81db662fe2448f8db84e0acb6d 215 SMART SM01120 33 207 1.9E-75 T 10-03-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CpPa04_RS05390 e044ae81db662fe2448f8db84e0acb6d 215 SUPERFAMILY SSF101473 4 208 5.62E-54 T 10-03-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CpPa04_RS00205 386a18b00197453140e71e94ae5934f8 176 Pfam PF11193 Protein of unknown function (DUF2812) 16 112 4.2E-14 T 10-03-2017 IPR021359 Protein of unknown function DUF2812 CpPa04_RS00205 386a18b00197453140e71e94ae5934f8 176 Gene3D G3DSA:1.20.1640.10 94 162 2.0E-4 T 10-03-2017 CpPa04_RS00205 386a18b00197453140e71e94ae5934f8 176 SUPERFAMILY SSF82866 87 163 4.19E-6 T 10-03-2017 CpPa04_RS09335 80bed1ca51a03157c9de08959daecbea 462 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 155 456 2.3E-119 T 10-03-2017 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CpPa04_RS09335 80bed1ca51a03157c9de08959daecbea 462 Pfam PF01515 Phosphate acetyl/butaryl transferase 140 456 9.3E-131 T 10-03-2017 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CpPa04_RS09335 80bed1ca51a03157c9de08959daecbea 462 SUPERFAMILY SSF53659 140 459 1.19E-94 T 10-03-2017 CpPa04_RS09335 80bed1ca51a03157c9de08959daecbea 462 Gene3D G3DSA:3.40.50.10750 274 432 3.5E-67 T 10-03-2017 CpPa04_RS01470 f7524f0e4fea93a32511dd68cc0c6ac0 328 Gene3D G3DSA:3.40.50.1980 192 309 3.4E-20 T 10-03-2017 CpPa04_RS01470 f7524f0e4fea93a32511dd68cc0c6ac0 328 SUPERFAMILY SSF53807 39 326 2.67E-37 T 10-03-2017 CpPa04_RS01470 f7524f0e4fea93a32511dd68cc0c6ac0 328 Pfam PF01497 Periplasmic binding protein 69 306 2.8E-24 T 10-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CpPa04_RS01470 f7524f0e4fea93a32511dd68cc0c6ac0 328 Gene3D G3DSA:3.40.50.1980 44 182 4.7E-13 T 10-03-2017 CpPa04_RS00480 05e0d69b0033ac6c206613804e0e4a87 286 Pfam PF07859 alpha/beta hydrolase fold 115 217 7.1E-8 T 10-03-2017 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 CpPa04_RS00480 05e0d69b0033ac6c206613804e0e4a87 286 SUPERFAMILY SSF53474 64 250 1.46E-17 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS00480 05e0d69b0033ac6c206613804e0e4a87 286 Gene3D G3DSA:3.40.50.1820 112 242 3.8E-13 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS07480 da07f55b166c165a1fc07fe5074f1b5b 456 Pfam PF13726 Na+-H+ antiporter family 2 88 2.5E-31 T 10-03-2017 IPR032813 Putative Na+/H+ antiporter, N-terminal CpPa04_RS07480 da07f55b166c165a1fc07fe5074f1b5b 456 Pfam PF03553 Na+/H+ antiporter family 153 450 1.6E-72 T 10-03-2017 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CpPa04_RS08470 bceb2a69ca9ecf0430bd2bb7c0f2daf6 161 PRINTS PR00601 Bacterioferritin signature 87 107 1.1E-5 T 10-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CpPa04_RS08470 bceb2a69ca9ecf0430bd2bb7c0f2daf6 161 PRINTS PR00601 Bacterioferritin signature 44 64 1.1E-5 T 10-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CpPa04_RS08470 bceb2a69ca9ecf0430bd2bb7c0f2daf6 161 PRINTS PR00601 Bacterioferritin signature 108 128 1.1E-5 T 10-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CpPa04_RS08470 bceb2a69ca9ecf0430bd2bb7c0f2daf6 161 PRINTS PR00601 Bacterioferritin signature 3 22 1.1E-5 T 10-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CpPa04_RS08470 bceb2a69ca9ecf0430bd2bb7c0f2daf6 161 Pfam PF00210 Ferritin-like domain 9 143 7.5E-34 T 10-03-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CpPa04_RS08470 bceb2a69ca9ecf0430bd2bb7c0f2daf6 161 SUPERFAMILY SSF47240 3 159 2.03E-46 T 10-03-2017 IPR009078 Ferritin-like superfamily CpPa04_RS08470 bceb2a69ca9ecf0430bd2bb7c0f2daf6 161 Gene3D G3DSA:1.20.1260.10 2 161 1.8E-47 T 10-03-2017 IPR012347 Ferritin-related CpPa04_RS06090 063e655cc003e08f71fdb323c70008df 249 SUPERFAMILY SSF54909 20 238 1.13E-67 T 10-03-2017 IPR011008 Dimeric alpha-beta barrel CpPa04_RS06090 063e655cc003e08f71fdb323c70008df 249 Pfam PF06778 Chlorite dismutase 48 238 6.4E-67 T 10-03-2017 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase CpPa04_RS06090 063e655cc003e08f71fdb323c70008df 249 Gene3D G3DSA:3.30.70.1030 45 149 2.5E-12 T 10-03-2017 CpPa04_RS06090 063e655cc003e08f71fdb323c70008df 249 Gene3D G3DSA:3.30.70.1100 150 238 1.6E-37 T 10-03-2017 CpPa04_RS02480 3a79cedb4fd46512dc4ae79e17aeeaaa 82 Pfam PF13822 Acyl-CoA carboxylase epsilon subunit 17 76 2.7E-19 T 10-03-2017 IPR032716 Acyl-CoA carboxylase epsilon subunit CpPa04_RS05270 f4af541760aa5bb87af30c79569ee149 64 Hamap MF_02106 Prokaryotic ubiquitin-like protein Pup [pup]. 1 64 15.87 T 10-03-2017 IPR008515 Ubiquitin-like, Pup CpPa04_RS05270 f4af541760aa5bb87af30c79569ee149 64 Pfam PF05639 Pup-like protein 27 64 6.4E-19 T 10-03-2017 IPR008515 Ubiquitin-like, Pup CpPa04_RS05270 f4af541760aa5bb87af30c79569ee149 64 TIGRFAM TIGR03687 pupylate_cterm: ubiquitin-like protein Pup 33 64 2.3E-21 T 10-03-2017 IPR008515 Ubiquitin-like, Pup CpPa04_RS02630 7e456629a4b0f9ced6648d8360ae2b1e 167 SUPERFAMILY SSF53271 12 165 1.85E-14 T 10-03-2017 IPR029057 Phosphoribosyltransferase-like CpPa04_RS02630 7e456629a4b0f9ced6648d8360ae2b1e 167 Gene3D G3DSA:3.40.50.2020 27 162 1.1E-11 T 10-03-2017 IPR029057 Phosphoribosyltransferase-like CpPa04_RS06115 56e512e05e3d617777dc4e8bec394384 234 Pfam PF11361 Protein of unknown function (DUF3159) 22 207 2.0E-62 T 10-03-2017 IPR016566 Uncharacterised conserved protein UCP010219 CpPa04_RS06115 56e512e05e3d617777dc4e8bec394384 234 PIRSF PIRSF010219 3 220 1.5E-68 T 10-03-2017 IPR016566 Uncharacterised conserved protein UCP010219 CpPa04_RS04680 11983e93562dc814bc22b9e08b671ffe 192 Pfam PF03602 Conserved hypothetical protein 95 2 170 5.2E-43 T 10-03-2017 CpPa04_RS04680 11983e93562dc814bc22b9e08b671ffe 192 Gene3D G3DSA:3.40.50.150 1 183 1.9E-48 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS04680 11983e93562dc814bc22b9e08b671ffe 192 SUPERFAMILY SSF53335 1 157 3.12E-40 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS04680 11983e93562dc814bc22b9e08b671ffe 192 PIRSF PIRSF004553 1 186 3.6E-47 T 10-03-2017 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CpPa04_RS04680 11983e93562dc814bc22b9e08b671ffe 192 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 179 2.8E-36 T 10-03-2017 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CpPa04_RS04680 11983e93562dc814bc22b9e08b671ffe 192 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 116 122 - T 10-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CpPa04_RS05305 efdf299f3f502d396fb9d04640cc4b05 550 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 550 45.724 T 10-03-2017 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CpPa04_RS05305 efdf299f3f502d396fb9d04640cc4b05 550 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 100 110 - T 10-03-2017 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CpPa04_RS05305 efdf299f3f502d396fb9d04640cc4b05 550 Gene3D G3DSA:3.30.1510.10 126 244 1.4E-54 T 10-03-2017 CpPa04_RS05305 efdf299f3f502d396fb9d04640cc4b05 550 SUPERFAMILY SSF52540 4 548 2.66E-224 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05305 efdf299f3f502d396fb9d04640cc4b05 550 Pfam PF01268 Formate--tetrahydrofolate ligase 3 550 1.5E-250 T 10-03-2017 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CpPa04_RS05305 efdf299f3f502d396fb9d04640cc4b05 550 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 325 336 - T 10-03-2017 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CpPa04_RS05305 efdf299f3f502d396fb9d04640cc4b05 550 Gene3D G3DSA:3.40.50.300 245 432 2.1E-131 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05305 efdf299f3f502d396fb9d04640cc4b05 550 Gene3D G3DSA:3.40.50.300 13 125 2.1E-131 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05305 efdf299f3f502d396fb9d04640cc4b05 550 Gene3D G3DSA:3.10.410.10 439 526 2.5E-32 T 10-03-2017 CpPa04_RS01150 7df55fa78051755e56636a3f8e172a57 67 PIRSF PIRSF002599 1 67 9.7E-27 T 10-03-2017 IPR012156 Cold shock, CspA GO:0003676 CpPa04_RS01150 7df55fa78051755e56636a3f8e172a57 67 SMART SM00357 3 67 2.3E-31 T 10-03-2017 IPR011129 Cold shock protein GO:0003676 CpPa04_RS01150 7df55fa78051755e56636a3f8e172a57 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 9.0E-33 T 10-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CpPa04_RS01150 7df55fa78051755e56636a3f8e172a57 67 SUPERFAMILY SSF50249 1 66 6.86E-26 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS01150 7df55fa78051755e56636a3f8e172a57 67 Gene3D G3DSA:2.40.50.140 1 65 7.7E-33 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS01150 7df55fa78051755e56636a3f8e172a57 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 10-03-2017 IPR019844 Cold-shock conserved site CpPa04_RS01150 7df55fa78051755e56636a3f8e172a57 67 PRINTS PR00050 Cold shock protein signature 25 34 1.0E-17 T 10-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CpPa04_RS01150 7df55fa78051755e56636a3f8e172a57 67 PRINTS PR00050 Cold shock protein signature 40 58 1.0E-17 T 10-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CpPa04_RS01150 7df55fa78051755e56636a3f8e172a57 67 PRINTS PR00050 Cold shock protein signature 4 19 1.0E-17 T 10-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CpPa04_RS04250 e64a7a7c5ddaa079a94e02e5a706332c 577 Gene3D G3DSA:2.30.38.10 361 453 3.4E-18 T 10-03-2017 CpPa04_RS04250 e64a7a7c5ddaa079a94e02e5a706332c 577 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 10-03-2017 IPR020845 AMP-binding, conserved site CpPa04_RS04250 e64a7a7c5ddaa079a94e02e5a706332c 577 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 546 3.4E-13 T 10-03-2017 IPR025110 AMP-binding enzyme C-terminal domain CpPa04_RS04250 e64a7a7c5ddaa079a94e02e5a706332c 577 Gene3D G3DSA:3.40.50.980 192 345 2.4E-28 T 10-03-2017 CpPa04_RS04250 e64a7a7c5ddaa079a94e02e5a706332c 577 Gene3D G3DSA:3.30.300.30 455 558 1.7E-21 T 10-03-2017 CpPa04_RS04250 e64a7a7c5ddaa079a94e02e5a706332c 577 Pfam PF00501 AMP-binding enzyme 34 459 1.6E-73 T 10-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CpPa04_RS04250 e64a7a7c5ddaa079a94e02e5a706332c 577 SUPERFAMILY SSF56801 18 558 3.53E-113 T 10-03-2017 CpPa04_RS04250 e64a7a7c5ddaa079a94e02e5a706332c 577 Gene3D G3DSA:3.40.50.980 22 191 4.4E-28 T 10-03-2017 CpPa04_RS09235 14990f840662fef348d6e0faa3f94785 160 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 109 8.2E-25 T 10-03-2017 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 CpPa04_RS09055 09093b3544ca0727c30e4b8c99be9a62 518 Pfam PF01336 OB-fold nucleic acid binding domain 76 153 2.3E-10 T 10-03-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CpPa04_RS09055 09093b3544ca0727c30e4b8c99be9a62 518 Gene3D G3DSA:2.40.50.140 11 163 2.9E-45 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS09055 09093b3544ca0727c30e4b8c99be9a62 518 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 12 517 1.7E-141 T 10-03-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CpPa04_RS09055 09093b3544ca0727c30e4b8c99be9a62 518 Gene3D G3DSA:3.30.930.10 169 513 2.4E-98 T 10-03-2017 CpPa04_RS09055 09093b3544ca0727c30e4b8c99be9a62 518 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 16 517 35.721 T 10-03-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CpPa04_RS09055 09093b3544ca0727c30e4b8c99be9a62 518 SUPERFAMILY SSF50249 9 163 8.36E-33 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS09055 09093b3544ca0727c30e4b8c99be9a62 518 PRINTS PR00982 Lysyl-tRNA synthetase signature 252 265 1.2E-32 T 10-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CpPa04_RS09055 09093b3544ca0727c30e4b8c99be9a62 518 PRINTS PR00982 Lysyl-tRNA synthetase signature 270 287 1.2E-32 T 10-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CpPa04_RS09055 09093b3544ca0727c30e4b8c99be9a62 518 PRINTS PR00982 Lysyl-tRNA synthetase signature 207 217 1.2E-32 T 10-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CpPa04_RS09055 09093b3544ca0727c30e4b8c99be9a62 518 PRINTS PR00982 Lysyl-tRNA synthetase signature 400 416 1.2E-32 T 10-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CpPa04_RS09055 09093b3544ca0727c30e4b8c99be9a62 518 PRINTS PR00982 Lysyl-tRNA synthetase signature 223 239 1.2E-32 T 10-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CpPa04_RS09055 09093b3544ca0727c30e4b8c99be9a62 518 SUPERFAMILY SSF55681 170 515 5.33E-99 T 10-03-2017 CpPa04_RS09055 09093b3544ca0727c30e4b8c99be9a62 518 Pfam PF00152 tRNA synthetases class II (D, K and N) 170 514 5.7E-71 T 10-03-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS04465 3fcdb0a092cf4b56b533721d8e4104c4 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 2.3E-76 T 10-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CpPa04_RS04465 3fcdb0a092cf4b56b533721d8e4104c4 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 2.3E-76 T 10-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CpPa04_RS04465 3fcdb0a092cf4b56b533721d8e4104c4 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 2.3E-76 T 10-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CpPa04_RS04465 3fcdb0a092cf4b56b533721d8e4104c4 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 262 284 2.3E-76 T 10-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CpPa04_RS04465 3fcdb0a092cf4b56b533721d8e4104c4 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 30 43 2.3E-76 T 10-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CpPa04_RS04465 3fcdb0a092cf4b56b533721d8e4104c4 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 5 24 2.3E-76 T 10-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CpPa04_RS04465 3fcdb0a092cf4b56b533721d8e4104c4 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 212 224 2.3E-76 T 10-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CpPa04_RS04465 3fcdb0a092cf4b56b533721d8e4104c4 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 2.3E-76 T 10-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CpPa04_RS04465 3fcdb0a092cf4b56b533721d8e4104c4 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 2.3E-76 T 10-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CpPa04_RS04465 3fcdb0a092cf4b56b533721d8e4104c4 342 Gene3D G3DSA:3.40.50.450 1 210 4.3E-74 T 10-03-2017 CpPa04_RS04465 3fcdb0a092cf4b56b533721d8e4104c4 342 SUPERFAMILY SSF53784 1 339 1.31E-121 T 10-03-2017 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CpPa04_RS04465 3fcdb0a092cf4b56b533721d8e4104c4 342 ProSitePatterns PS00433 Phosphofructokinase signature. 266 284 - T 10-03-2017 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CpPa04_RS04465 3fcdb0a092cf4b56b533721d8e4104c4 342 Pfam PF00365 Phosphofructokinase 2 297 3.7E-105 T 10-03-2017 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CpPa04_RS04465 3fcdb0a092cf4b56b533721d8e4104c4 342 TIGRFAM TIGR02483 PFK_mixed: phosphofructokinase 2 323 2.3E-146 T 10-03-2017 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CpPa04_RS04465 3fcdb0a092cf4b56b533721d8e4104c4 342 Hamap MF_01976 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 1 342 43.709 T 10-03-2017 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CpPa04_RS04465 3fcdb0a092cf4b56b533721d8e4104c4 342 PIRSF PIRSF000532 1 340 3.4E-116 T 10-03-2017 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CpPa04_RS05665 0ff4b2e246dd069d4fccccc77a9bdd0b 157 SUPERFAMILY SSF52121 11 154 3.66E-47 T 10-03-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CpPa04_RS05665 0ff4b2e246dd069d4fccccc77a9bdd0b 157 Gene3D G3DSA:3.40.50.960 10 155 1.3E-49 T 10-03-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CpPa04_RS05665 0ff4b2e246dd069d4fccccc77a9bdd0b 157 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 18 150 1.9E-39 T 10-03-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CpPa04_RS05665 0ff4b2e246dd069d4fccccc77a9bdd0b 157 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 17 150 6.8E-45 T 10-03-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CpPa04_RS05665 0ff4b2e246dd069d4fccccc77a9bdd0b 157 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 12 154 23.597 T 10-03-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CpPa04_RS01045 eb772099786390fd8c926cb329ea7e5c 152 SUPERFAMILY SSF55298 2 150 2.98E-51 T 10-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CpPa04_RS01045 eb772099786390fd8c926cb329ea7e5c 152 Gene3D G3DSA:3.30.1330.40 2 150 4.4E-62 T 10-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CpPa04_RS01045 eb772099786390fd8c926cb329ea7e5c 152 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 7 149 8.6E-32 T 10-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CpPa04_RS03080 95ecdddebe3818ee82282727f738e187 431 PRINTS PR00143 Citrate synthase signature 244 272 3.4E-53 T 10-03-2017 IPR002020 Citrate synthase GO:0046912 CpPa04_RS03080 95ecdddebe3818ee82282727f738e187 431 PRINTS PR00143 Citrate synthase signature 363 379 3.4E-53 T 10-03-2017 IPR002020 Citrate synthase GO:0046912 CpPa04_RS03080 95ecdddebe3818ee82282727f738e187 431 PRINTS PR00143 Citrate synthase signature 222 237 3.4E-53 T 10-03-2017 IPR002020 Citrate synthase GO:0046912 CpPa04_RS03080 95ecdddebe3818ee82282727f738e187 431 PRINTS PR00143 Citrate synthase signature 383 397 3.4E-53 T 10-03-2017 IPR002020 Citrate synthase GO:0046912 CpPa04_RS03080 95ecdddebe3818ee82282727f738e187 431 PRINTS PR00143 Citrate synthase signature 168 181 3.4E-53 T 10-03-2017 IPR002020 Citrate synthase GO:0046912 CpPa04_RS03080 95ecdddebe3818ee82282727f738e187 431 PRINTS PR00143 Citrate synthase signature 301 321 3.4E-53 T 10-03-2017 IPR002020 Citrate synthase GO:0046912 CpPa04_RS03080 95ecdddebe3818ee82282727f738e187 431 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 17 424 3.4E-162 T 10-03-2017 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 CpPa04_RS03080 95ecdddebe3818ee82282727f738e187 431 PIRSF PIRSF001369 40 431 3.1E-163 T 10-03-2017 IPR024176 Citrate synthase, bacterial-type CpPa04_RS03080 95ecdddebe3818ee82282727f738e187 431 SUPERFAMILY SSF48256 6 431 3.4E-153 T 10-03-2017 IPR002020 Citrate synthase GO:0046912 CpPa04_RS03080 95ecdddebe3818ee82282727f738e187 431 Gene3D G3DSA:1.10.580.10 55 284 3.4E-91 T 10-03-2017 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CpPa04_RS03080 95ecdddebe3818ee82282727f738e187 431 Pfam PF00285 Citrate synthase, C-terminal domain 50 414 2.8E-132 T 10-03-2017 IPR002020 Citrate synthase GO:0046912 CpPa04_RS03080 95ecdddebe3818ee82282727f738e187 431 ProSitePatterns PS00480 Citrate synthase signature. 308 320 - T 10-03-2017 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CpPa04_RS03080 95ecdddebe3818ee82282727f738e187 431 Gene3D G3DSA:1.10.230.10 285 377 2.3E-37 T 10-03-2017 IPR016143 Citrate synthase-like, small alpha subdomain Reactome: R-HSA-163765|Reactome: R-HSA-75105 CpPa04_RS02365 012c908e859809f6ac9231b34dd99877 342 SUPERFAMILY SSF52374 11 336 1.01E-93 T 10-03-2017 CpPa04_RS02365 012c908e859809f6ac9231b34dd99877 342 Gene3D G3DSA:1.10.240.10 214 304 2.5E-15 T 10-03-2017 CpPa04_RS02365 012c908e859809f6ac9231b34dd99877 342 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 23 39 3.0E-28 T 10-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CpPa04_RS02365 012c908e859809f6ac9231b34dd99877 342 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 150 171 3.0E-28 T 10-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CpPa04_RS02365 012c908e859809f6ac9231b34dd99877 342 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 73 92 3.0E-28 T 10-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CpPa04_RS02365 012c908e859809f6ac9231b34dd99877 342 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 203 213 3.0E-28 T 10-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CpPa04_RS02365 012c908e859809f6ac9231b34dd99877 342 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 9 337 42.328 T 10-03-2017 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 CpPa04_RS02365 012c908e859809f6ac9231b34dd99877 342 Gene3D G3DSA:3.40.50.620 10 213 5.0E-83 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS02365 012c908e859809f6ac9231b34dd99877 342 Pfam PF00579 tRNA synthetases class I (W and Y) 9 291 6.0E-82 T 10-03-2017 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS02365 012c908e859809f6ac9231b34dd99877 342 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 8 336 1.3E-101 T 10-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CpPa04_RS07250 a9b0d4c19f9a8bdaeee5068eaf34b919 115 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 12 115 3.2E-33 T 10-03-2017 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 CpPa04_RS07250 a9b0d4c19f9a8bdaeee5068eaf34b919 115 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 97 114 - T 10-03-2017 IPR017870 FeS cluster insertion, C-terminal, conserved site CpPa04_RS07250 a9b0d4c19f9a8bdaeee5068eaf34b919 115 Pfam PF01521 Iron-sulphur cluster biosynthesis 13 112 3.6E-16 T 10-03-2017 IPR000361 FeS cluster biogenesis CpPa04_RS07250 a9b0d4c19f9a8bdaeee5068eaf34b919 115 Gene3D G3DSA:2.60.300.12 11 104 8.0E-27 T 10-03-2017 IPR000361 FeS cluster biogenesis CpPa04_RS07250 a9b0d4c19f9a8bdaeee5068eaf34b919 115 SUPERFAMILY SSF89360 8 102 7.65E-26 T 10-03-2017 IPR000361 FeS cluster biogenesis CpPa04_RS08480 f0a5d61fb3bc81e7406f0efef1da1c82 145 Gene3D G3DSA:3.40.50.360 3 130 9.0E-49 T 10-03-2017 IPR029039 Flavoprotein-like domain CpPa04_RS08480 f0a5d61fb3bc81e7406f0efef1da1c82 145 TIGRFAM TIGR00333 nrdI: nrdI protein 4 128 2.5E-44 T 10-03-2017 IPR004465 Ribonucleotide reductase Class Ib, NrdI CpPa04_RS08480 f0a5d61fb3bc81e7406f0efef1da1c82 145 Pfam PF07972 NrdI Flavodoxin like 4 127 5.5E-44 T 10-03-2017 IPR004465 Ribonucleotide reductase Class Ib, NrdI CpPa04_RS08480 f0a5d61fb3bc81e7406f0efef1da1c82 145 Hamap MF_00128 Protein NrdI [nrdI]. 2 137 33.406 T 10-03-2017 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial CpPa04_RS08480 f0a5d61fb3bc81e7406f0efef1da1c82 145 PIRSF PIRSF005087 1 139 9.0E-54 T 10-03-2017 IPR004465 Ribonucleotide reductase Class Ib, NrdI CpPa04_RS08480 f0a5d61fb3bc81e7406f0efef1da1c82 145 SUPERFAMILY SSF52218 2 127 2.96E-20 T 10-03-2017 IPR029039 Flavoprotein-like domain CpPa04_RS00245 a28c15dcfafff9ef85a7b402628561c3 424 SUPERFAMILY SSF103473 22 404 2.75E-32 T 10-03-2017 IPR020846 Major facilitator superfamily domain CpPa04_RS00245 a28c15dcfafff9ef85a7b402628561c3 424 Gene3D G3DSA:1.20.1250.20 22 194 8.0E-21 T 10-03-2017 CpPa04_RS00245 a28c15dcfafff9ef85a7b402628561c3 424 Gene3D G3DSA:1.20.1250.20 229 402 4.3E-7 T 10-03-2017 CpPa04_RS00245 a28c15dcfafff9ef85a7b402628561c3 424 Pfam PF07690 Major Facilitator Superfamily 26 326 1.9E-15 T 10-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CpPa04_RS06680 2862736097e2ca6dbed891ac7bdc3cbb 521 SUPERFAMILY SSF52540 204 513 7.2E-40 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06680 2862736097e2ca6dbed891ac7bdc3cbb 521 Gene3D G3DSA:3.40.50.300 204 400 8.0E-45 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06680 2862736097e2ca6dbed891ac7bdc3cbb 521 SUPERFAMILY SSF54211 11 180 1.25E-30 T 10-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CpPa04_RS06680 2862736097e2ca6dbed891ac7bdc3cbb 521 Gene3D G3DSA:3.30.230.10 13 179 5.7E-37 T 10-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CpPa04_RS06680 2862736097e2ca6dbed891ac7bdc3cbb 521 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 415 512 3.8E-22 T 10-03-2017 IPR025158 Mg chelatase-related protein, C-terminal domain CpPa04_RS06680 2862736097e2ca6dbed891ac7bdc3cbb 521 Pfam PF01078 Magnesium chelatase, subunit ChlI 206 403 8.6E-83 T 10-03-2017 IPR000523 Magnesium chelatase ChlI domain CpPa04_RS06680 2862736097e2ca6dbed891ac7bdc3cbb 521 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 12 512 1.1E-136 T 10-03-2017 IPR004482 Mg chelatase-related protein CpPa04_RS06680 2862736097e2ca6dbed891ac7bdc3cbb 521 Pfam PF13541 Subunit ChlI of Mg-chelatase 26 150 3.0E-35 T 10-03-2017 CpPa04_RS06680 2862736097e2ca6dbed891ac7bdc3cbb 521 SMART SM00382 226 406 2.7E-5 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS08865 a18f0a572ae0672812689c860a33d4eb 501 Pfam PF00672 HAMP domain 200 267 2.9E-16 T 10-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CpPa04_RS08865 a18f0a572ae0672812689c860a33d4eb 501 SUPERFAMILY SSF55874 333 498 1.96E-43 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS08865 a18f0a572ae0672812689c860a33d4eb 501 Gene3D G3DSA:1.10.287.130 272 328 2.1E-16 T 10-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CpPa04_RS08865 a18f0a572ae0672812689c860a33d4eb 501 Gene3D G3DSA:3.30.565.10 329 500 3.4E-43 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS08865 a18f0a572ae0672812689c860a33d4eb 501 Pfam PF00512 His Kinase A (phospho-acceptor) domain 280 342 9.9E-16 T 10-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CpPa04_RS08865 a18f0a572ae0672812689c860a33d4eb 501 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 386 498 9.3E-27 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS08865 a18f0a572ae0672812689c860a33d4eb 501 SUPERFAMILY SSF158472 218 269 6.8E-10 T 10-03-2017 CpPa04_RS08865 a18f0a572ae0672812689c860a33d4eb 501 SMART SM00304 218 271 3.7E-11 T 10-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CpPa04_RS08865 a18f0a572ae0672812689c860a33d4eb 501 SMART SM00387 386 500 3.5E-40 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS08865 a18f0a572ae0672812689c860a33d4eb 501 SUPERFAMILY SSF47384 263 341 2.94E-16 T 10-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CpPa04_RS08865 a18f0a572ae0672812689c860a33d4eb 501 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 439 6.6E-19 T 10-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CpPa04_RS08865 a18f0a572ae0672812689c860a33d4eb 501 PRINTS PR00344 Bacterial sensor protein C-terminal signature 484 497 6.6E-19 T 10-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CpPa04_RS08865 a18f0a572ae0672812689c860a33d4eb 501 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 453 6.6E-19 T 10-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CpPa04_RS08865 a18f0a572ae0672812689c860a33d4eb 501 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 478 6.6E-19 T 10-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CpPa04_RS08865 a18f0a572ae0672812689c860a33d4eb 501 SMART SM00388 279 343 1.6E-16 T 10-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CpPa04_RS00650 f8edef04295625ed3d1ca3b09c9a8e16 267 Gene3D G3DSA:3.10.180.10 9 129 4.5E-32 T 10-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CpPa04_RS00650 f8edef04295625ed3d1ca3b09c9a8e16 267 Gene3D G3DSA:3.10.180.10 144 266 1.2E-32 T 10-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CpPa04_RS00650 f8edef04295625ed3d1ca3b09c9a8e16 267 SUPERFAMILY SSF54593 11 177 2.82E-19 T 10-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CpPa04_RS00650 f8edef04295625ed3d1ca3b09c9a8e16 267 SUPERFAMILY SSF54593 144 264 5.77E-22 T 10-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CpPa04_RS00650 f8edef04295625ed3d1ca3b09c9a8e16 267 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 147 264 1.1E-7 T 10-03-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CpPa04_RS06820 4c0a12dfaa594f7705f65e1e0228601e 396 PIRSF PIRSF006078 22 390 2.8E-93 T 10-03-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CpPa04_RS06820 4c0a12dfaa594f7705f65e1e0228601e 396 Gene3D G3DSA:3.90.1510.10 70 272 1.7E-54 T 10-03-2017 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 CpPa04_RS06820 4c0a12dfaa594f7705f65e1e0228601e 396 SUPERFAMILY SSF110738 23 358 1.83E-80 T 10-03-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CpPa04_RS06820 4c0a12dfaa594f7705f65e1e0228601e 396 Pfam PF02595 Glycerate kinase family 24 359 5.1E-85 T 10-03-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CpPa04_RS06820 4c0a12dfaa594f7705f65e1e0228601e 396 Gene3D G3DSA:3.40.50.10350 273 354 6.3E-13 T 10-03-2017 IPR018197 Glycerate kinase, restriction-enzyme-like fold CpPa04_RS06820 4c0a12dfaa594f7705f65e1e0228601e 396 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 24 356 4.6E-72 T 10-03-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CpPa04_RS00320 60ba397005af1cc83bf48efbbe467cdb 470 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 8 470 6.6E-196 T 10-03-2017 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CpPa04_RS00320 60ba397005af1cc83bf48efbbe467cdb 470 SUPERFAMILY SSF53167 9 470 7.3E-109 T 10-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CpPa04_RS00320 60ba397005af1cc83bf48efbbe467cdb 470 Gene3D G3DSA:3.30.1730.10 7 158 2.4E-35 T 10-03-2017 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CpPa04_RS00320 60ba397005af1cc83bf48efbbe467cdb 470 Gene3D G3DSA:3.40.50.1580 162 448 3.7E-89 T 10-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CpPa04_RS00320 60ba397005af1cc83bf48efbbe467cdb 470 Pfam PF01048 Phosphorylase superfamily 257 432 1.4E-14 T 10-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CpPa04_RS00320 60ba397005af1cc83bf48efbbe467cdb 470 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 9 155 1.4E-34 T 10-03-2017 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CpPa04_RS07095 4629702b177e91a87e75b1cbc9b33324 366 ProSitePatterns PS01348 MraY family signature 2. 186 197 - T 10-03-2017 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CpPa04_RS07095 4629702b177e91a87e75b1cbc9b33324 366 ProSitePatterns PS01347 MraY family signature 1. 46 58 - T 10-03-2017 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CpPa04_RS07095 4629702b177e91a87e75b1cbc9b33324 366 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 46 58 1.0E-5 T 10-03-2017 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CpPa04_RS07095 4629702b177e91a87e75b1cbc9b33324 366 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 3 357 22.47 T 10-03-2017 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CpPa04_RS07095 4629702b177e91a87e75b1cbc9b33324 366 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 15 354 3.1E-88 T 10-03-2017 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CpPa04_RS07095 4629702b177e91a87e75b1cbc9b33324 366 Pfam PF00953 Glycosyl transferase family 4 86 282 8.1E-34 T 10-03-2017 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 CpPa04_RS04455 7a16f124aa22480bba5b81db7a4b575a 255 SMART SM00382 28 213 1.0E-18 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS04455 7a16f124aa22480bba5b81db7a4b575a 255 Pfam PF00005 ABC transporter 19 168 3.0E-29 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS04455 7a16f124aa22480bba5b81db7a4b575a 255 Gene3D G3DSA:3.40.50.300 8 234 9.1E-58 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04455 7a16f124aa22480bba5b81db7a4b575a 255 SUPERFAMILY SSF52540 5 224 1.87E-56 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04455 7a16f124aa22480bba5b81db7a4b575a 255 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS04220 5a67936410b0eb4b5d6dce9931ecb6a6 550 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 14 539 2.1E-118 T 10-03-2017 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CpPa04_RS04220 5a67936410b0eb4b5d6dce9931ecb6a6 550 Pfam PF02652 L-lactate permease 15 539 3.7E-118 T 10-03-2017 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CpPa04_RS07225 b079c4ad8fab2e2f8133396640de2a4c 298 SUPERFAMILY SSF46626 38 149 1.81E-15 T 10-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CpPa04_RS07225 b079c4ad8fab2e2f8133396640de2a4c 298 SUPERFAMILY SSF46626 171 255 3.25E-26 T 10-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CpPa04_RS07225 b079c4ad8fab2e2f8133396640de2a4c 298 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 179 253 3.0E-12 T 10-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CpPa04_RS07225 b079c4ad8fab2e2f8133396640de2a4c 298 Pfam PF00034 Cytochrome c 72 145 1.1E-5 T 10-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CpPa04_RS07225 b079c4ad8fab2e2f8133396640de2a4c 298 Gene3D G3DSA:1.10.760.10 178 261 7.8E-20 T 10-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CpPa04_RS07225 b079c4ad8fab2e2f8133396640de2a4c 298 Gene3D G3DSA:1.10.760.10 69 153 3.3E-18 T 10-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CpPa04_RS07225 b079c4ad8fab2e2f8133396640de2a4c 298 PIRSF PIRSF000007 10 298 4.2E-139 T 10-03-2017 IPR009152 Ubiquinol-cytochrome-c reductase, cytochrome c subunit GO:0005506|GO:0009055|GO:0016021|GO:0020037 CpPa04_RS02610 ab859b684e70c4d7c303ce8db6c1d44b 206 SUPERFAMILY SSF52540 1 203 4.87E-29 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02610 ab859b684e70c4d7c303ce8db6c1d44b 206 ProSitePatterns PS01331 Thymidylate kinase signature. 87 99 - T 10-03-2017 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CpPa04_RS02610 ab859b684e70c4d7c303ce8db6c1d44b 206 Gene3D G3DSA:3.40.50.300 1 203 4.0E-42 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02610 ab859b684e70c4d7c303ce8db6c1d44b 206 Hamap MF_00165 Thymidylate kinase [tmk]. 1 204 14.069 T 10-03-2017 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CpPa04_RS02610 ab859b684e70c4d7c303ce8db6c1d44b 206 Pfam PF02223 Thymidylate kinase 5 179 2.0E-23 T 10-03-2017 CpPa04_RS10560 e62793b087a92090661bd91566b0228f 543 SUPERFAMILY SSF51905 5 345 1.09E-52 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS10560 e62793b087a92090661bd91566b0228f 543 SUPERFAMILY SSF51905 489 523 1.09E-52 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS10560 e62793b087a92090661bd91566b0228f 543 Gene3D G3DSA:3.50.50.60 6 97 1.8E-32 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS10560 e62793b087a92090661bd91566b0228f 543 Gene3D G3DSA:3.50.50.60 213 383 1.8E-32 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS10560 e62793b087a92090661bd91566b0228f 543 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 9 535 5.4E-168 T 10-03-2017 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 CpPa04_RS10560 e62793b087a92090661bd91566b0228f 543 Pfam PF01593 Flavin containing amine oxidoreductase 17 518 2.9E-23 T 10-03-2017 IPR002937 Amine oxidase GO:0016491|GO:0055114 CpPa04_RS05350 f85db3816489f10a857e472d4fe076f2 295 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 28 281 3.7E-88 T 10-03-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CpPa04_RS05350 f85db3816489f10a857e472d4fe076f2 295 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 22 288 18.3 T 10-03-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CpPa04_RS05350 f85db3816489f10a857e472d4fe076f2 295 Pfam PF02673 Bacitracin resistance protein BacA 28 282 4.6E-76 T 10-03-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CpPa04_RS05970 b5a6b7abd4f7ac8b1af76be7856296c0 193 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 6 160 42.641 T 10-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CpPa04_RS05970 b5a6b7abd4f7ac8b1af76be7856296c0 193 Gene3D G3DSA:3.30.420.10 7 161 1.0E-52 T 10-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CpPa04_RS05970 b5a6b7abd4f7ac8b1af76be7856296c0 193 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 119 154 - T 10-03-2017 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 CpPa04_RS05970 b5a6b7abd4f7ac8b1af76be7856296c0 193 SUPERFAMILY SSF53098 6 163 6.83E-43 T 10-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CpPa04_RS05970 b5a6b7abd4f7ac8b1af76be7856296c0 193 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 8 159 5.2E-33 T 10-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CpPa04_RS05970 b5a6b7abd4f7ac8b1af76be7856296c0 193 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 8 157 3.1E-52 T 10-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CpPa04_RS05970 b5a6b7abd4f7ac8b1af76be7856296c0 193 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 9 22 6.0E-33 T 10-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CpPa04_RS05970 b5a6b7abd4f7ac8b1af76be7856296c0 193 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 145 157 6.0E-33 T 10-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CpPa04_RS05970 b5a6b7abd4f7ac8b1af76be7856296c0 193 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 113 132 6.0E-33 T 10-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CpPa04_RS05970 b5a6b7abd4f7ac8b1af76be7856296c0 193 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 67 83 6.0E-33 T 10-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CpPa04_RS05970 b5a6b7abd4f7ac8b1af76be7856296c0 193 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 89 105 6.0E-33 T 10-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CpPa04_RS04855 40780f859c3c4278899f04f456216ecb 477 Gene3D G3DSA:1.20.200.10 116 383 2.2E-93 T 10-03-2017 CpPa04_RS04855 40780f859c3c4278899f04f456216ecb 477 Hamap MF_00006 Argininosuccinate lyase [argH]. 10 462 38.332 T 10-03-2017 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CpPa04_RS04855 40780f859c3c4278899f04f456216ecb 477 SUPERFAMILY SSF48557 14 460 2.98E-127 T 10-03-2017 IPR008948 L-Aspartase-like GO:0003824 CpPa04_RS04855 40780f859c3c4278899f04f456216ecb 477 Gene3D G3DSA:1.10.275.10 10 115 1.4E-32 T 10-03-2017 IPR024083 Fumarase/histidase, N-terminal CpPa04_RS04855 40780f859c3c4278899f04f456216ecb 477 Gene3D G3DSA:1.10.40.30 384 440 1.0E-27 T 10-03-2017 CpPa04_RS04855 40780f859c3c4278899f04f456216ecb 477 ProSitePatterns PS00163 Fumarate lyases signature. 284 293 - T 10-03-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 CpPa04_RS04855 40780f859c3c4278899f04f456216ecb 477 Pfam PF00206 Lyase 14 309 2.8E-63 T 10-03-2017 IPR022761 Fumarate lyase, N-terminal CpPa04_RS04855 40780f859c3c4278899f04f456216ecb 477 PRINTS PR00149 Fumarate lyase superfamily signature 111 129 9.4E-24 T 10-03-2017 IPR000362 Fumarate lyase family CpPa04_RS04855 40780f859c3c4278899f04f456216ecb 477 PRINTS PR00149 Fumarate lyase superfamily signature 240 267 9.4E-24 T 10-03-2017 IPR000362 Fumarate lyase family CpPa04_RS04855 40780f859c3c4278899f04f456216ecb 477 PRINTS PR00149 Fumarate lyase superfamily signature 284 300 9.4E-24 T 10-03-2017 IPR000362 Fumarate lyase family CpPa04_RS04855 40780f859c3c4278899f04f456216ecb 477 PRINTS PR00149 Fumarate lyase superfamily signature 156 174 9.4E-24 T 10-03-2017 IPR000362 Fumarate lyase family CpPa04_RS04855 40780f859c3c4278899f04f456216ecb 477 Pfam PF14698 Argininosuccinate lyase C-terminal 372 440 2.2E-21 T 10-03-2017 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CpPa04_RS04855 40780f859c3c4278899f04f456216ecb 477 PRINTS PR00145 Argininosuccinate lyase family signature 284 300 1.1E-49 T 10-03-2017 CpPa04_RS04855 40780f859c3c4278899f04f456216ecb 477 PRINTS PR00145 Argininosuccinate lyase family signature 240 264 1.1E-49 T 10-03-2017 CpPa04_RS04855 40780f859c3c4278899f04f456216ecb 477 PRINTS PR00145 Argininosuccinate lyase family signature 319 338 1.1E-49 T 10-03-2017 CpPa04_RS04855 40780f859c3c4278899f04f456216ecb 477 PRINTS PR00145 Argininosuccinate lyase family signature 110 132 1.1E-49 T 10-03-2017 CpPa04_RS04855 40780f859c3c4278899f04f456216ecb 477 PRINTS PR00145 Argininosuccinate lyase family signature 151 171 1.1E-49 T 10-03-2017 CpPa04_RS04855 40780f859c3c4278899f04f456216ecb 477 PRINTS PR00145 Argininosuccinate lyase family signature 202 218 1.1E-49 T 10-03-2017 CpPa04_RS04855 40780f859c3c4278899f04f456216ecb 477 TIGRFAM TIGR00838 argH: argininosuccinate lyase 11 456 2.6E-175 T 10-03-2017 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CpPa04_RS03580 6faabf5290cd5ab32410eaf542845684 487 Gene3D G3DSA:2.160.10.10 347 465 6.1E-28 T 10-03-2017 CpPa04_RS03580 6faabf5290cd5ab32410eaf542845684 487 Gene3D G3DSA:3.90.550.10 7 259 2.2E-71 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS03580 6faabf5290cd5ab32410eaf542845684 487 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 9 465 39.174 T 10-03-2017 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 CpPa04_RS03580 6faabf5290cd5ab32410eaf542845684 487 SUPERFAMILY SSF51161 230 451 1.4E-40 T 10-03-2017 IPR011004 Trimeric LpxA-like CpPa04_RS03580 6faabf5290cd5ab32410eaf542845684 487 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 279 312 5.1E-4 T 10-03-2017 IPR001451 Hexapeptide repeat CpPa04_RS03580 6faabf5290cd5ab32410eaf542845684 487 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 407 441 0.0012 T 10-03-2017 IPR001451 Hexapeptide repeat CpPa04_RS03580 6faabf5290cd5ab32410eaf542845684 487 Gene3D G3DSA:2.160.10.10 260 346 6.5E-14 T 10-03-2017 CpPa04_RS03580 6faabf5290cd5ab32410eaf542845684 487 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 11 467 2.2E-167 T 10-03-2017 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 CpPa04_RS03580 6faabf5290cd5ab32410eaf542845684 487 SUPERFAMILY SSF53448 10 261 8.25E-58 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS03580 6faabf5290cd5ab32410eaf542845684 487 Pfam PF12804 MobA-like NTP transferase domain 12 146 1.6E-21 T 10-03-2017 IPR025877 MobA-like NTP transferase CpPa04_RS09590 30dea9418bf4fcb2d1b64759274a80ea 423 Pfam PF12704 MacB-like periplasmic core domain 21 264 2.9E-29 T 10-03-2017 IPR025857 MacB-like periplasmic core domain CpPa04_RS09590 30dea9418bf4fcb2d1b64759274a80ea 423 Pfam PF02687 FtsX-like permease family 304 416 3.4E-18 T 10-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 CpPa04_RS00425 1f9063ab4bd29ff18337e0c42d18c522 247 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 39 243 3.1E-40 T 10-03-2017 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like CpPa04_RS00425 1f9063ab4bd29ff18337e0c42d18c522 247 Gene3D G3DSA:2.60.120.590 37 245 1.8E-45 T 10-03-2017 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like CpPa04_RS00425 1f9063ab4bd29ff18337e0c42d18c522 247 SUPERFAMILY SSF51197 36 245 9.61E-39 T 10-03-2017 CpPa04_RS00780 e8b15bf189c6a9f57caab5000c7ad584 302 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 289 1.5E-31 T 10-03-2017 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CpPa04_RS00780 e8b15bf189c6a9f57caab5000c7ad584 302 SUPERFAMILY SSF51735 5 167 2.06E-31 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS00780 e8b15bf189c6a9f57caab5000c7ad584 302 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 161 5.8E-31 T 10-03-2017 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CpPa04_RS00780 e8b15bf189c6a9f57caab5000c7ad584 302 PIRSF PIRSF000103 1 298 1.1E-61 T 10-03-2017 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CpPa04_RS00780 e8b15bf189c6a9f57caab5000c7ad584 302 Gene3D G3DSA:1.10.1040.10 166 291 8.5E-37 T 10-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CpPa04_RS00780 e8b15bf189c6a9f57caab5000c7ad584 302 SUPERFAMILY SSF48179 165 289 1.25E-30 T 10-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CpPa04_RS00780 e8b15bf189c6a9f57caab5000c7ad584 302 Gene3D G3DSA:3.40.50.720 5 163 4.8E-38 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS00780 e8b15bf189c6a9f57caab5000c7ad584 302 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 10-03-2017 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 CpPa04_RS08345 7804616c623f8198c06034a259989d5f 208 Gene3D G3DSA:3.40.50.2300 1 116 1.4E-33 T 10-03-2017 CpPa04_RS08345 7804616c623f8198c06034a259989d5f 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 198 1.8E-18 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS08345 7804616c623f8198c06034a259989d5f 208 SMART SM00421 143 200 2.0E-22 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS08345 7804616c623f8198c06034a259989d5f 208 SUPERFAMILY SSF52172 1 130 6.26E-33 T 10-03-2017 IPR011006 CheY-like superfamily CpPa04_RS08345 7804616c623f8198c06034a259989d5f 208 SMART SM00448 2 112 1.5E-29 T 10-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CpPa04_RS08345 7804616c623f8198c06034a259989d5f 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS08345 7804616c623f8198c06034a259989d5f 208 Pfam PF00072 Response regulator receiver domain 4 113 3.0E-24 T 10-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CpPa04_RS08345 7804616c623f8198c06034a259989d5f 208 SUPERFAMILY SSF46894 140 204 8.84E-20 T 10-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CpPa04_RS08345 7804616c623f8198c06034a259989d5f 208 Gene3D G3DSA:1.10.10.10 117 204 4.4E-26 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS08345 7804616c623f8198c06034a259989d5f 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 1.9E-12 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS08345 7804616c623f8198c06034a259989d5f 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 1.9E-12 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS08345 7804616c623f8198c06034a259989d5f 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 1.9E-12 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS05680 02b5d263f2cda0e37f0465250646ff99 353 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 41 125 2.2E-16 T 10-03-2017 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 CpPa04_RS05680 02b5d263f2cda0e37f0465250646ff99 353 Pfam PF01872 RibD C-terminal domain 169 345 3.3E-34 T 10-03-2017 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 CpPa04_RS05680 02b5d263f2cda0e37f0465250646ff99 353 SUPERFAMILY SSF53597 167 348 4.64E-38 T 10-03-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CpPa04_RS05680 02b5d263f2cda0e37f0465250646ff99 353 Gene3D G3DSA:3.40.430.10 169 350 3.2E-42 T 10-03-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CpPa04_RS05680 02b5d263f2cda0e37f0465250646ff99 353 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 34 346 3.4E-86 T 10-03-2017 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 CpPa04_RS05680 02b5d263f2cda0e37f0465250646ff99 353 Gene3D G3DSA:3.40.140.10 40 150 5.0E-23 T 10-03-2017 CpPa04_RS05680 02b5d263f2cda0e37f0465250646ff99 353 SUPERFAMILY SSF53927 32 150 1.29E-32 T 10-03-2017 IPR016193 Cytidine deaminase-like GO:0003824 CpPa04_RS05680 02b5d263f2cda0e37f0465250646ff99 353 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 76 114 - T 10-03-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CpPa04_RS02910 b2621679d3d5727883d5b0107105f0e4 294 Gene3D G3DSA:3.40.190.80 201 289 9.4E-11 T 10-03-2017 CpPa04_RS02910 b2621679d3d5727883d5b0107105f0e4 294 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 111 124 - T 10-03-2017 IPR020583 Inositol monophosphatase, metal-binding site CpPa04_RS02910 b2621679d3d5727883d5b0107105f0e4 294 SUPERFAMILY SSF56655 34 288 2.36E-55 T 10-03-2017 CpPa04_RS02910 b2621679d3d5727883d5b0107105f0e4 294 PRINTS PR00377 Inositol monophosphatase superfamily signature 91 107 4.9E-12 T 10-03-2017 IPR000760 Inositol monophosphatase GO:0046854 CpPa04_RS02910 b2621679d3d5727883d5b0107105f0e4 294 PRINTS PR00377 Inositol monophosphatase superfamily signature 69 89 4.9E-12 T 10-03-2017 IPR000760 Inositol monophosphatase GO:0046854 CpPa04_RS02910 b2621679d3d5727883d5b0107105f0e4 294 PRINTS PR00377 Inositol monophosphatase superfamily signature 111 127 4.9E-12 T 10-03-2017 IPR000760 Inositol monophosphatase GO:0046854 CpPa04_RS02910 b2621679d3d5727883d5b0107105f0e4 294 Pfam PF00459 Inositol monophosphatase family 38 271 1.9E-35 T 10-03-2017 IPR000760 Inositol monophosphatase GO:0046854 CpPa04_RS02910 b2621679d3d5727883d5b0107105f0e4 294 Gene3D G3DSA:3.30.540.10 38 189 2.2E-34 T 10-03-2017 CpPa04_RS07940 0b4e4bf65026f7379d6b4a6e53348cda 615 Gene3D G3DSA:3.30.70.240 418 507 2.2E-19 T 10-03-2017 IPR000640 Translation elongation factor EFG, V domain CpPa04_RS07940 0b4e4bf65026f7379d6b4a6e53348cda 615 Pfam PF00009 Elongation factor Tu GTP binding domain 15 197 4.1E-49 T 10-03-2017 CpPa04_RS07940 0b4e4bf65026f7379d6b4a6e53348cda 615 TIGRFAM TIGR01393 lepA: elongation factor 4 15 613 3.3E-284 T 10-03-2017 IPR006297 Elongation factor 4 GO:0005525 CpPa04_RS07940 0b4e4bf65026f7379d6b4a6e53348cda 615 SUPERFAMILY SSF54980 309 388 5.4E-18 T 10-03-2017 IPR009022 Elongation factor G, III-V domain CpPa04_RS07940 0b4e4bf65026f7379d6b4a6e53348cda 615 PRINTS PR00315 GTP-binding elongation factor signature 106 117 2.6E-13 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS07940 0b4e4bf65026f7379d6b4a6e53348cda 615 PRINTS PR00315 GTP-binding elongation factor signature 18 31 2.6E-13 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS07940 0b4e4bf65026f7379d6b4a6e53348cda 615 PRINTS PR00315 GTP-binding elongation factor signature 142 151 2.6E-13 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS07940 0b4e4bf65026f7379d6b4a6e53348cda 615 PRINTS PR00315 GTP-binding elongation factor signature 90 100 2.6E-13 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS07940 0b4e4bf65026f7379d6b4a6e53348cda 615 PRINTS PR00315 GTP-binding elongation factor signature 61 69 2.6E-13 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS07940 0b4e4bf65026f7379d6b4a6e53348cda 615 Gene3D G3DSA:2.40.30.10 213 307 1.4E-17 T 10-03-2017 CpPa04_RS07940 0b4e4bf65026f7379d6b4a6e53348cda 615 Pfam PF00679 Elongation factor G C-terminus 416 501 3.2E-21 T 10-03-2017 IPR000640 Translation elongation factor EFG, V domain CpPa04_RS07940 0b4e4bf65026f7379d6b4a6e53348cda 615 Gene3D G3DSA:3.30.70.870 309 387 2.5E-25 T 10-03-2017 CpPa04_RS07940 0b4e4bf65026f7379d6b4a6e53348cda 615 SUPERFAMILY SSF54980 416 511 9.59E-23 T 10-03-2017 IPR009022 Elongation factor G, III-V domain CpPa04_RS07940 0b4e4bf65026f7379d6b4a6e53348cda 615 SUPERFAMILY SSF52540 8 221 2.44E-52 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07940 0b4e4bf65026f7379d6b4a6e53348cda 615 SUPERFAMILY SSF50447 181 304 6.82E-21 T 10-03-2017 IPR009000 Translation protein, beta-barrel domain CpPa04_RS07940 0b4e4bf65026f7379d6b4a6e53348cda 615 Hamap MF_00071 Elongation factor 4 [lepA]. 1 615 278.294 T 10-03-2017 IPR006297 Elongation factor 4 GO:0005525 CpPa04_RS07940 0b4e4bf65026f7379d6b4a6e53348cda 615 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 54 69 - T 10-03-2017 IPR031157 Tr-type G domain, conserved site CpPa04_RS07940 0b4e4bf65026f7379d6b4a6e53348cda 615 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 16 192 5.4E-18 T 10-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CpPa04_RS07940 0b4e4bf65026f7379d6b4a6e53348cda 615 Pfam PF06421 GTP-binding protein LepA C-terminus 506 610 8.2E-49 T 10-03-2017 IPR013842 GTP-binding protein LepA, C-terminal CpPa04_RS07940 0b4e4bf65026f7379d6b4a6e53348cda 615 SMART SM00838 415 499 5.8E-4 T 10-03-2017 IPR000640 Translation elongation factor EFG, V domain CpPa04_RS07940 0b4e4bf65026f7379d6b4a6e53348cda 615 Gene3D G3DSA:3.40.50.300 11 212 7.7E-56 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04440 ab00b78cf4f6343c94a1f57ffa5be680 482 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 39 448 1.0E-92 T 10-03-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 CpPa04_RS04440 ab00b78cf4f6343c94a1f57ffa5be680 482 SUPERFAMILY SSF103473 231 478 6.15E-29 T 10-03-2017 IPR020846 Major facilitator superfamily domain CpPa04_RS04440 ab00b78cf4f6343c94a1f57ffa5be680 482 Gene3D G3DSA:1.20.1250.20 288 469 1.0E-19 T 10-03-2017 CpPa04_RS04440 ab00b78cf4f6343c94a1f57ffa5be680 482 Gene3D G3DSA:1.20.1250.20 36 221 4.5E-38 T 10-03-2017 CpPa04_RS04440 ab00b78cf4f6343c94a1f57ffa5be680 482 SUPERFAMILY SSF103473 27 218 3.66E-50 T 10-03-2017 IPR020846 Major facilitator superfamily domain CpPa04_RS04440 ab00b78cf4f6343c94a1f57ffa5be680 482 Pfam PF07690 Major Facilitator Superfamily 234 436 8.0E-23 T 10-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CpPa04_RS04440 ab00b78cf4f6343c94a1f57ffa5be680 482 Pfam PF07690 Major Facilitator Superfamily 42 220 5.5E-40 T 10-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CpPa04_RS04440 ab00b78cf4f6343c94a1f57ffa5be680 482 PRINTS PR01036 Tetracycline resistance protein TetB signature 132 152 9.9E-7 T 10-03-2017 CpPa04_RS04440 ab00b78cf4f6343c94a1f57ffa5be680 482 PRINTS PR01036 Tetracycline resistance protein TetB signature 162 186 9.9E-7 T 10-03-2017 CpPa04_RS04440 ab00b78cf4f6343c94a1f57ffa5be680 482 PRINTS PR01036 Tetracycline resistance protein TetB signature 41 65 9.9E-7 T 10-03-2017 CpPa04_RS02145 3c5bbe20ebe5c57ae2e3ed6ad81620b7 540 PRINTS PR00298 60kDa chaperonin signature 348 373 5.5E-63 T 10-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 CpPa04_RS02145 3c5bbe20ebe5c57ae2e3ed6ad81620b7 540 PRINTS PR00298 60kDa chaperonin signature 396 417 5.5E-63 T 10-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 CpPa04_RS02145 3c5bbe20ebe5c57ae2e3ed6ad81620b7 540 PRINTS PR00298 60kDa chaperonin signature 266 289 5.5E-63 T 10-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 CpPa04_RS02145 3c5bbe20ebe5c57ae2e3ed6ad81620b7 540 PRINTS PR00298 60kDa chaperonin signature 26 52 5.5E-63 T 10-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 CpPa04_RS02145 3c5bbe20ebe5c57ae2e3ed6ad81620b7 540 PRINTS PR00298 60kDa chaperonin signature 82 109 5.5E-63 T 10-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 CpPa04_RS02145 3c5bbe20ebe5c57ae2e3ed6ad81620b7 540 Hamap MF_00600 60 kDa chaperonin [groL]. 1 534 37.897 T 10-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 CpPa04_RS02145 3c5bbe20ebe5c57ae2e3ed6ad81620b7 540 Gene3D G3DSA:1.10.560.10 368 517 5.4E-34 T 10-03-2017 IPR027413 GroEL-like equatorial domain CpPa04_RS02145 3c5bbe20ebe5c57ae2e3ed6ad81620b7 540 SUPERFAMILY SSF52029 183 374 1.02E-71 T 10-03-2017 IPR027409 GroEL-like apical domain CpPa04_RS02145 3c5bbe20ebe5c57ae2e3ed6ad81620b7 540 SUPERFAMILY SSF48592 371 524 9.92E-30 T 10-03-2017 CpPa04_RS02145 3c5bbe20ebe5c57ae2e3ed6ad81620b7 540 Gene3D G3DSA:1.10.560.10 6 186 1.9E-42 T 10-03-2017 IPR027413 GroEL-like equatorial domain CpPa04_RS02145 3c5bbe20ebe5c57ae2e3ed6ad81620b7 540 Gene3D G3DSA:3.50.7.10 187 367 6.6E-82 T 10-03-2017 IPR027409 GroEL-like apical domain CpPa04_RS02145 3c5bbe20ebe5c57ae2e3ed6ad81620b7 540 SUPERFAMILY SSF48592 2 229 2.22E-60 T 10-03-2017 CpPa04_RS02145 3c5bbe20ebe5c57ae2e3ed6ad81620b7 540 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 10-03-2017 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020 CpPa04_RS02145 3c5bbe20ebe5c57ae2e3ed6ad81620b7 540 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 524 1.2E-216 T 10-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 CpPa04_RS02145 3c5bbe20ebe5c57ae2e3ed6ad81620b7 540 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 523 1.5E-88 T 10-03-2017 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 CpPa04_RS08895 c0dbf7e17c7458e1323bc5dd0b3a57aa 294 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 15 74 6.3E-6 T 10-03-2017 IPR025159 Transcriptional regulator, AbiEi antitoxin CpPa04_RS08895 c0dbf7e17c7458e1323bc5dd0b3a57aa 294 Pfam PF04480 Protein of unknown function (DUF559) 178 265 5.5E-7 T 10-03-2017 IPR007569 Domain of unknown function DUF559 CpPa04_RS08895 c0dbf7e17c7458e1323bc5dd0b3a57aa 294 SUPERFAMILY SSF52980 158 246 4.56E-10 T 10-03-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CpPa04_RS08895 c0dbf7e17c7458e1323bc5dd0b3a57aa 294 Gene3D G3DSA:3.40.960.10 176 226 2.0E-6 T 10-03-2017 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 CpPa04_RS08725 ea4a53d804cc464daf82a314e85bfb16 343 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 39 341 3.5E-81 T 10-03-2017 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 CpPa04_RS08725 ea4a53d804cc464daf82a314e85bfb16 343 Gene3D G3DSA:1.10.3720.10 51 340 3.6E-35 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS08725 ea4a53d804cc464daf82a314e85bfb16 343 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 124 338 7.9E-16 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS08725 ea4a53d804cc464daf82a314e85bfb16 343 SUPERFAMILY SSF161098 63 335 6.41E-33 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS08910 ce044c4026343c4f47772566e555e0bd 489 Pfam PF12821 Threonine/Serine exporter, ThrE 325 451 8.2E-19 T 10-03-2017 IPR024528 Threonine/Serine exporter, ThrE CpPa04_RS08910 ce044c4026343c4f47772566e555e0bd 489 Pfam PF06738 Putative threonine/serine exporter 54 299 4.8E-55 T 10-03-2017 IPR010619 Putative threonine/serine exporter CpPa04_RS01790 ce7ed26822d6152733ffe960d0b106cb 101 Gene3D G3DSA:3.30.70.330 6 98 5.3E-35 T 10-03-2017 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 CpPa04_RS01790 ce7ed26822d6152733ffe960d0b106cb 101 SUPERFAMILY SSF54189 5 96 6.83E-33 T 10-03-2017 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS01790 ce7ed26822d6152733ffe960d0b106cb 101 Pfam PF00276 Ribosomal protein L23 9 91 1.3E-31 T 10-03-2017 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CpPa04_RS01790 ce7ed26822d6152733ffe960d0b106cb 101 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 21.952 T 10-03-2017 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CpPa04_RS06965 7d1d38d125a3f533bf598ecff003df46 124 PIRSF PIRSF016821 4 124 4.6E-47 T 10-03-2017 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 CpPa04_RS06965 7d1d38d125a3f533bf598ecff003df46 124 SMART SM00363 7 70 1.0E-5 T 10-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 CpPa04_RS06965 7d1d38d125a3f533bf598ecff003df46 124 Pfam PF01479 S4 domain 7 53 1.3E-10 T 10-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 CpPa04_RS06965 7d1d38d125a3f533bf598ecff003df46 124 SUPERFAMILY SSF55174 6 89 7.07E-24 T 10-03-2017 CpPa04_RS06965 7d1d38d125a3f533bf598ecff003df46 124 Gene3D G3DSA:3.10.290.10 5 96 1.7E-30 T 10-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 CpPa04_RS05020 9c9117cb6a5e0541420c24de77f3373f 273 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS05020 9c9117cb6a5e0541420c24de77f3373f 273 SUPERFAMILY SSF52540 15 241 5.64E-63 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05020 9c9117cb6a5e0541420c24de77f3373f 273 SMART SM00382 41 229 8.3E-14 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS05020 9c9117cb6a5e0541420c24de77f3373f 273 Pfam PF00005 ABC transporter 33 180 6.0E-32 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS05020 9c9117cb6a5e0541420c24de77f3373f 273 Gene3D G3DSA:3.40.50.300 13 242 4.3E-67 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07985 e161622ea7e14afc8733e47a2c3780a1 247 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 10-03-2017 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 CpPa04_RS07985 e161622ea7e14afc8733e47a2c3780a1 247 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 190 3.8E-57 T 10-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 CpPa04_RS07985 e161622ea7e14afc8733e47a2c3780a1 247 SUPERFAMILY SSF53254 1 190 1.11E-56 T 10-03-2017 IPR029033 Histidine phosphatase superfamily CpPa04_RS07985 e161622ea7e14afc8733e47a2c3780a1 247 SMART SM00855 4 160 1.7E-24 T 10-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 CpPa04_RS07985 e161622ea7e14afc8733e47a2c3780a1 247 Gene3D G3DSA:3.40.50.1240 1 197 7.7E-60 T 10-03-2017 IPR029033 Histidine phosphatase superfamily CpPa04_RS05610 210f8b9a42c5219bcc917c8a6e03183c 236 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 227 6.8E-65 T 10-03-2017 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 CpPa04_RS05610 210f8b9a42c5219bcc917c8a6e03183c 236 SUPERFAMILY SSF100950 6 235 1.34E-58 T 10-03-2017 CpPa04_RS05610 210f8b9a42c5219bcc917c8a6e03183c 236 Gene3D G3DSA:3.40.50.1360 3 235 1.1E-65 T 10-03-2017 CpPa04_RS05610 210f8b9a42c5219bcc917c8a6e03183c 236 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 33 235 6.5E-63 T 10-03-2017 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 CpPa04_RS08270 d205362eab91bd614a7e2f3e05a7afb1 209 SUPERFAMILY SSF53098 3 186 1.9E-45 T 10-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CpPa04_RS08270 d205362eab91bd614a7e2f3e05a7afb1 209 SMART SM00479 10 185 3.0E-26 T 10-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III CpPa04_RS08270 d205362eab91bd614a7e2f3e05a7afb1 209 Hamap MF_00045 Oligoribonuclease [orn]. 6 186 37.469 T 10-03-2017 IPR022894 Oligoribonuclease GO:0016788 CpPa04_RS08270 d205362eab91bd614a7e2f3e05a7afb1 209 Gene3D G3DSA:3.30.420.10 7 185 1.2E-66 T 10-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CpPa04_RS08270 d205362eab91bd614a7e2f3e05a7afb1 209 Pfam PF00929 Exonuclease 12 175 1.3E-25 T 10-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III CpPa04_RS06025 49d54330a3434f54ea625d309dafd27e 689 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 72 672 32.411 T 10-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CpPa04_RS06025 49d54330a3434f54ea625d309dafd27e 689 SUPERFAMILY SSF52954 567 676 1.03E-26 T 10-03-2017 IPR004154 Anticodon-binding CpPa04_RS06025 49d54330a3434f54ea625d309dafd27e 689 SUPERFAMILY SSF55681 266 564 1.12E-88 T 10-03-2017 CpPa04_RS06025 49d54330a3434f54ea625d309dafd27e 689 Pfam PF03129 Anticodon binding domain 579 667 6.9E-15 T 10-03-2017 IPR004154 Anticodon-binding CpPa04_RS06025 49d54330a3434f54ea625d309dafd27e 689 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 78 667 1.6E-186 T 10-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CpPa04_RS06025 49d54330a3434f54ea625d309dafd27e 689 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 197 242 5.6E-11 T 10-03-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CpPa04_RS06025 49d54330a3434f54ea625d309dafd27e 689 SUPERFAMILY SSF55186 70 264 6.93E-55 T 10-03-2017 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CpPa04_RS06025 49d54330a3434f54ea625d309dafd27e 689 PRINTS PR01047 Threonyl-tRNA synthetase signature 502 530 5.5E-51 T 10-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CpPa04_RS06025 49d54330a3434f54ea625d309dafd27e 689 PRINTS PR01047 Threonyl-tRNA synthetase signature 545 558 5.5E-51 T 10-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CpPa04_RS06025 49d54330a3434f54ea625d309dafd27e 689 PRINTS PR01047 Threonyl-tRNA synthetase signature 399 422 5.5E-51 T 10-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CpPa04_RS06025 49d54330a3434f54ea625d309dafd27e 689 PRINTS PR01047 Threonyl-tRNA synthetase signature 572 584 5.5E-51 T 10-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CpPa04_RS06025 49d54330a3434f54ea625d309dafd27e 689 PRINTS PR01047 Threonyl-tRNA synthetase signature 366 394 5.5E-51 T 10-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CpPa04_RS06025 49d54330a3434f54ea625d309dafd27e 689 Gene3D G3DSA:3.30.54.20 138 210 5.8E-10 T 10-03-2017 CpPa04_RS06025 49d54330a3434f54ea625d309dafd27e 689 Gene3D G3DSA:3.30.930.10 265 568 1.3E-99 T 10-03-2017 CpPa04_RS06025 49d54330a3434f54ea625d309dafd27e 689 SMART SM00863 186 242 1.1E-13 T 10-03-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CpPa04_RS06025 49d54330a3434f54ea625d309dafd27e 689 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 361 567 2.0E-35 T 10-03-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CpPa04_RS06025 49d54330a3434f54ea625d309dafd27e 689 Gene3D G3DSA:3.30.980.10 71 135 5.0E-41 T 10-03-2017 CpPa04_RS06025 49d54330a3434f54ea625d309dafd27e 689 Gene3D G3DSA:3.30.980.10 211 247 5.0E-41 T 10-03-2017 CpPa04_RS06025 49d54330a3434f54ea625d309dafd27e 689 Gene3D G3DSA:3.40.50.800 569 675 5.4E-28 T 10-03-2017 IPR004154 Anticodon-binding CpPa04_RS08965 1493a4d360f6c29e50f6b8015e577b70 159 Gene3D G3DSA:3.30.1330.50 5 159 8.1E-51 T 10-03-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CpPa04_RS08965 1493a4d360f6c29e50f6b8015e577b70 159 SUPERFAMILY SSF69765 7 158 1.09E-47 T 10-03-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CpPa04_RS08965 1493a4d360f6c29e50f6b8015e577b70 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 41 56 - T 10-03-2017 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CpPa04_RS08965 1493a4d360f6c29e50f6b8015e577b70 159 Pfam PF02542 YgbB family 8 157 4.1E-43 T 10-03-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CpPa04_RS08965 1493a4d360f6c29e50f6b8015e577b70 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 7 159 29.606 T 10-03-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CpPa04_RS08965 1493a4d360f6c29e50f6b8015e577b70 159 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 8 158 5.8E-45 T 10-03-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CpPa04_RS07950 bd3b53b9d5b4dae06fee8269f2791e1a 87 Pfam PF01649 Ribosomal protein S20 2 84 1.8E-29 T 10-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS07950 bd3b53b9d5b4dae06fee8269f2791e1a 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 2.5E-24 T 10-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS07950 bd3b53b9d5b4dae06fee8269f2791e1a 87 SUPERFAMILY SSF46992 3 86 6.54E-28 T 10-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS07950 bd3b53b9d5b4dae06fee8269f2791e1a 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 14 86 1.0E-26 T 10-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS07950 bd3b53b9d5b4dae06fee8269f2791e1a 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.101 T 10-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS07950 bd3b53b9d5b4dae06fee8269f2791e1a 87 Gene3D G3DSA:1.20.58.110 1 86 9.6E-30 T 10-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS03590 f64e5106f10751ad9b61da23679aa4e6 379 Pfam PF03595 Voltage-dependent anion channel 35 364 2.4E-52 T 10-03-2017 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 CpPa04_RS07240 2f44480d78f63c71759e9457e9ed6014 361 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 224 302 7.5E-11 T 10-03-2017 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS07240 2f44480d78f63c71759e9457e9ed6014 361 SUPERFAMILY SSF81464 25 132 2.94E-17 T 10-03-2017 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS07240 2f44480d78f63c71759e9457e9ed6014 361 Gene3D G3DSA:2.60.40.420 142 313 2.7E-36 T 10-03-2017 IPR008972 Cupredoxin CpPa04_RS07240 2f44480d78f63c71759e9457e9ed6014 361 SUPERFAMILY SSF49503 141 163 1.83E-32 T 10-03-2017 IPR008972 Cupredoxin CpPa04_RS07240 2f44480d78f63c71759e9457e9ed6014 361 SUPERFAMILY SSF49503 219 344 1.83E-32 T 10-03-2017 IPR008972 Cupredoxin CpPa04_RS07240 2f44480d78f63c71759e9457e9ed6014 361 Gene3D G3DSA:1.10.287.90 43 134 1.5E-17 T 10-03-2017 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS07240 2f44480d78f63c71759e9457e9ed6014 361 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 242 296 - T 10-03-2017 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS07240 2f44480d78f63c71759e9457e9ed6014 361 PRINTS PR01166 Cytochrome c oxidase subunit II signature 285 302 4.6E-5 T 10-03-2017 CpPa04_RS07240 2f44480d78f63c71759e9457e9ed6014 361 PRINTS PR01166 Cytochrome c oxidase subunit II signature 105 117 4.6E-5 T 10-03-2017 CpPa04_RS07240 2f44480d78f63c71759e9457e9ed6014 361 PRINTS PR01166 Cytochrome c oxidase subunit II signature 140 159 4.6E-5 T 10-03-2017 CpPa04_RS01130 e8aec0107f4883a1c9386d70fb2d1721 64 Pfam PF14029 Protein of unknown function (DUF4244) 10 60 7.6E-22 T 10-03-2017 IPR025338 Protein of unknown function DUF4244 CpPa04_RS03240 e231a245c2c1ef42f8fd52e5a3b8a153 273 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 127 202 9.3E-10 T 10-03-2017 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CpPa04_RS03240 e231a245c2c1ef42f8fd52e5a3b8a153 273 Gene3D G3DSA:3.20.190.10 2 96 3.0E-9 T 10-03-2017 CpPa04_RS03240 e231a245c2c1ef42f8fd52e5a3b8a153 273 SMART SM01232 127 217 1.5E-18 T 10-03-2017 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CpPa04_RS03240 e231a245c2c1ef42f8fd52e5a3b8a153 273 Gene3D G3DSA:1.10.8.50 127 268 1.6E-30 T 10-03-2017 CpPa04_RS03240 e231a245c2c1ef42f8fd52e5a3b8a153 273 SUPERFAMILY SSF57716 216 268 4.56E-9 T 10-03-2017 CpPa04_RS03240 e231a245c2c1ef42f8fd52e5a3b8a153 273 SMART SM00898 2 113 1.4E-12 T 10-03-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CpPa04_RS03240 e231a245c2c1ef42f8fd52e5a3b8a153 273 SUPERFAMILY SSF46946 126 194 1.57E-15 T 10-03-2017 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CpPa04_RS03240 e231a245c2c1ef42f8fd52e5a3b8a153 273 SUPERFAMILY SSF81624 2 128 1.44E-17 T 10-03-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CpPa04_RS03240 e231a245c2c1ef42f8fd52e5a3b8a153 273 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 94 2.5E-7 T 10-03-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CpPa04_RS08500 7d330c8b118121bb64d3c9fc3c37bca2 144 SUPERFAMILY SSF50475 8 135 1.37E-23 T 10-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 CpPa04_RS08500 7d330c8b118121bb64d3c9fc3c37bca2 144 Gene3D G3DSA:2.30.110.10 2 143 3.1E-49 T 10-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 CpPa04_RS08500 7d330c8b118121bb64d3c9fc3c37bca2 144 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 13 126 1.3E-22 T 10-03-2017 IPR024747 Pyridoxamine 5'-phosphate oxidase-related CpPa04_RS08240 4e7ef9c0beb1b6b4811641e6dd14ced7 761 Pfam PF02554 Carbon starvation protein CstA 65 442 1.6E-165 T 10-03-2017 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 CpPa04_RS08240 4e7ef9c0beb1b6b4811641e6dd14ced7 761 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 501 630 2.3E-29 T 10-03-2017 IPR025299 CstA, C-terminal domain CpPa04_RS08005 cc8deaa8dac122ee8bdece690c7aef7e 304 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 92 267 5.3E-51 T 10-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CpPa04_RS08005 cc8deaa8dac122ee8bdece690c7aef7e 304 SUPERFAMILY SSF52283 24 106 1.5E-7 T 10-03-2017 CpPa04_RS08005 cc8deaa8dac122ee8bdece690c7aef7e 304 Gene3D G3DSA:3.40.50.720 8 97 3.1E-13 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS08005 cc8deaa8dac122ee8bdece690c7aef7e 304 SUPERFAMILY SSF51735 83 267 9.62E-51 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS08005 cc8deaa8dac122ee8bdece690c7aef7e 304 Gene3D G3DSA:3.40.50.720 98 267 4.3E-56 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS07445 cfca080fbc160d5c9dd83ee2e19f04d8 236 SUPERFAMILY SSF52540 4 219 5.18E-66 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07445 cfca080fbc160d5c9dd83ee2e19f04d8 236 Gene3D G3DSA:3.40.50.300 4 233 7.1E-68 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07445 cfca080fbc160d5c9dd83ee2e19f04d8 236 Pfam PF00005 ABC transporter 24 170 2.5E-35 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS07445 cfca080fbc160d5c9dd83ee2e19f04d8 236 SMART SM00382 33 218 6.2E-17 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS07445 cfca080fbc160d5c9dd83ee2e19f04d8 236 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS01495 0c248ba84b2653be68e1bd350bc9da5d 291 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 5 288 20.382 T 10-03-2017 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CpPa04_RS01495 0c248ba84b2653be68e1bd350bc9da5d 291 PIRSF PIRSF005355 1 291 4.1E-79 T 10-03-2017 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 CpPa04_RS01495 0c248ba84b2653be68e1bd350bc9da5d 291 Pfam PF01040 UbiA prenyltransferase family 22 254 6.1E-34 T 10-03-2017 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 CpPa04_RS01495 0c248ba84b2653be68e1bd350bc9da5d 291 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 14 286 2.1E-90 T 10-03-2017 CpPa04_RS00350 0d958b75d855b0c0957ac09c3b52395d 195 Pfam PF00881 Nitroreductase family 9 172 1.3E-22 T 10-03-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 CpPa04_RS00350 0d958b75d855b0c0957ac09c3b52395d 195 SUPERFAMILY SSF55469 5 185 3.01E-36 T 10-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CpPa04_RS00350 0d958b75d855b0c0957ac09c3b52395d 195 Gene3D G3DSA:3.40.109.10 4 180 1.9E-37 T 10-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CpPa04_RS08030 b204fadfec540e183632b74bc619f4ec 88 Pfam PF01016 Ribosomal L27 protein 2 80 4.2E-37 T 10-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS08030 b204fadfec540e183632b74bc619f4ec 88 Gene3D G3DSA:2.40.50.100 20 81 3.2E-30 T 10-03-2017 CpPa04_RS08030 b204fadfec540e183632b74bc619f4ec 88 SUPERFAMILY SSF110324 2 81 5.93E-32 T 10-03-2017 CpPa04_RS08030 b204fadfec540e183632b74bc619f4ec 88 PRINTS PR00063 Ribosomal protein L27 signature 29 53 3.8E-36 T 10-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS08030 b204fadfec540e183632b74bc619f4ec 88 PRINTS PR00063 Ribosomal protein L27 signature 4 28 3.8E-36 T 10-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS08030 b204fadfec540e183632b74bc619f4ec 88 PRINTS PR00063 Ribosomal protein L27 signature 54 78 3.8E-36 T 10-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS08030 b204fadfec540e183632b74bc619f4ec 88 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 10-03-2017 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS08030 b204fadfec540e183632b74bc619f4ec 88 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 3.7E-37 T 10-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS08030 b204fadfec540e183632b74bc619f4ec 88 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 6.0E-18 T 10-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS08030 b204fadfec540e183632b74bc619f4ec 88 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 83 27.459 T 10-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS06565 e9657ed1c718de45b96d3e56bc2099f9 360 Gene3D G3DSA:3.40.50.300 9 170 8.1E-50 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06565 e9657ed1c718de45b96d3e56bc2099f9 360 SUPERFAMILY SSF52540 9 300 2.01E-55 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06565 e9657ed1c718de45b96d3e56bc2099f9 360 Gene3D G3DSA:1.10.8.80 218 304 3.0E-33 T 10-03-2017 CpPa04_RS06565 e9657ed1c718de45b96d3e56bc2099f9 360 Pfam PF07728 AAA domain (dynein-related subfamily) 36 165 5.5E-12 T 10-03-2017 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 CpPa04_RS06565 e9657ed1c718de45b96d3e56bc2099f9 360 SMART SM00382 32 167 3.9E-4 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS02740 7da5f7da62ee4eeb47e87877016db3b5 1062 Gene3D G3DSA:3.40.50.300 600 710 8.9E-31 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02740 7da5f7da62ee4eeb47e87877016db3b5 1062 Gene3D G3DSA:3.40.50.300 339 415 8.9E-31 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02740 7da5f7da62ee4eeb47e87877016db3b5 1062 SUPERFAMILY SSF52540 68 449 2.66E-65 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02740 7da5f7da62ee4eeb47e87877016db3b5 1062 SUPERFAMILY SSF52540 664 711 2.66E-65 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02740 7da5f7da62ee4eeb47e87877016db3b5 1062 SUPERFAMILY SSF52540 482 636 2.66E-65 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02740 7da5f7da62ee4eeb47e87877016db3b5 1062 Gene3D G3DSA:3.40.50.300 67 192 1.9E-21 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02740 7da5f7da62ee4eeb47e87877016db3b5 1062 Gene3D G3DSA:3.40.50.300 235 326 1.9E-21 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02740 7da5f7da62ee4eeb47e87877016db3b5 1062 Pfam PF13361 UvrD-like helicase C-terminal domain 347 687 2.4E-16 T 10-03-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CpPa04_RS02740 7da5f7da62ee4eeb47e87877016db3b5 1062 Pfam PF12705 PD-(D/E)XK nuclease superfamily 805 1052 8.0E-32 T 10-03-2017 CpPa04_RS02740 7da5f7da62ee4eeb47e87877016db3b5 1062 Pfam PF00580 UvrD/REP helicase N-terminal domain 68 322 1.1E-12 T 10-03-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CpPa04_RS04345 7d31bdd8c6a06e62fa33516db7a6527f 105 SUPERFAMILY SSF89957 3 100 2.75E-26 T 10-03-2017 IPR029756 MTH1187/YkoF-like CpPa04_RS04345 7d31bdd8c6a06e62fa33516db7a6527f 105 Pfam PF01910 Thiamine-binding protein 4 95 5.8E-28 T 10-03-2017 IPR002767 Thiamine-binding protein CpPa04_RS04345 7d31bdd8c6a06e62fa33516db7a6527f 105 Gene3D G3DSA:3.30.70.930 1 99 2.9E-32 T 10-03-2017 IPR029756 MTH1187/YkoF-like CpPa04_RS03100 0b0b18d0cece29d8e55c2679be0e675b 286 Gene3D G3DSA:3.20.20.100 8 271 1.5E-97 T 10-03-2017 IPR023210 NADP-dependent oxidoreductase domain CpPa04_RS03100 0b0b18d0cece29d8e55c2679be0e675b 286 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 236 251 - T 10-03-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CpPa04_RS03100 0b0b18d0cece29d8e55c2679be0e675b 286 SUPERFAMILY SSF51430 9 278 4.32E-85 T 10-03-2017 IPR023210 NADP-dependent oxidoreductase domain CpPa04_RS03100 0b0b18d0cece29d8e55c2679be0e675b 286 Pfam PF00248 Aldo/keto reductase family 207 268 6.5E-9 T 10-03-2017 IPR023210 NADP-dependent oxidoreductase domain CpPa04_RS03100 0b0b18d0cece29d8e55c2679be0e675b 286 Pfam PF00248 Aldo/keto reductase family 21 201 8.8E-36 T 10-03-2017 IPR023210 NADP-dependent oxidoreductase domain CpPa04_RS03100 0b0b18d0cece29d8e55c2679be0e675b 286 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 44 61 - T 10-03-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CpPa04_RS03100 0b0b18d0cece29d8e55c2679be0e675b 286 PRINTS PR00069 Aldo-keto reductase signature 100 118 1.1E-42 T 10-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CpPa04_RS03100 0b0b18d0cece29d8e55c2679be0e675b 286 PRINTS PR00069 Aldo-keto reductase signature 203 227 1.1E-42 T 10-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CpPa04_RS03100 0b0b18d0cece29d8e55c2679be0e675b 286 PRINTS PR00069 Aldo-keto reductase signature 40 64 1.1E-42 T 10-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CpPa04_RS03100 0b0b18d0cece29d8e55c2679be0e675b 286 PRINTS PR00069 Aldo-keto reductase signature 132 149 1.1E-42 T 10-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CpPa04_RS03100 0b0b18d0cece29d8e55c2679be0e675b 286 PRINTS PR00069 Aldo-keto reductase signature 166 195 1.1E-42 T 10-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CpPa04_RS00690 00154c59f66087b8665375e1d78e890c 150 TIGRFAM TIGR03941 tRNA_deam_assoc: putative tRNA adenosine deaminase-associated protein 3 149 9.4E-49 T 10-03-2017 IPR023869 tRNA adenosine deaminase-associated protein, putative CpPa04_RS00635 771c14505ffaa42063823d0130197dfb 282 Gene3D G3DSA:2.30.24.10 5 58 1.0E-12 T 10-03-2017 IPR004341 CAT RNA-binding domain GO:0003723 CpPa04_RS00635 771c14505ffaa42063823d0130197dfb 282 SUPERFAMILY SSF63520 66 168 5.23E-16 T 10-03-2017 IPR011608 PRD domain GO:0006355 CpPa04_RS00635 771c14505ffaa42063823d0130197dfb 282 Gene3D G3DSA:1.10.1790.10 202 275 7.9E-7 T 10-03-2017 IPR011608 PRD domain GO:0006355 CpPa04_RS00635 771c14505ffaa42063823d0130197dfb 282 Gene3D G3DSA:1.10.1790.10 75 168 3.1E-16 T 10-03-2017 IPR011608 PRD domain GO:0006355 CpPa04_RS00635 771c14505ffaa42063823d0130197dfb 282 SUPERFAMILY SSF50151 5 57 1.57E-9 T 10-03-2017 IPR004341 CAT RNA-binding domain GO:0003723 CpPa04_RS00635 771c14505ffaa42063823d0130197dfb 282 Pfam PF03123 CAT RNA binding domain 5 54 2.8E-11 T 10-03-2017 IPR004341 CAT RNA-binding domain GO:0003723 CpPa04_RS00635 771c14505ffaa42063823d0130197dfb 282 SUPERFAMILY SSF63520 209 275 9.16E-6 T 10-03-2017 IPR011608 PRD domain GO:0006355 CpPa04_RS00635 771c14505ffaa42063823d0130197dfb 282 SMART SM01061 4 64 5.5E-7 T 10-03-2017 IPR004341 CAT RNA-binding domain GO:0003723 CpPa04_RS00635 771c14505ffaa42063823d0130197dfb 282 Pfam PF00874 PRD domain 204 271 8.2E-5 T 10-03-2017 IPR011608 PRD domain GO:0006355 CpPa04_RS00635 771c14505ffaa42063823d0130197dfb 282 Pfam PF00874 PRD domain 94 167 8.0E-13 T 10-03-2017 IPR011608 PRD domain GO:0006355 CpPa04_RS09120 c003bc81b9a671b6f7425656bb4be499 260 SUPERFAMILY SSF51717 3 256 2.75E-81 T 10-03-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CpPa04_RS09120 c003bc81b9a671b6f7425656bb4be499 260 Pfam PF00809 Pterin binding enzyme 5 239 1.2E-77 T 10-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CpPa04_RS09120 c003bc81b9a671b6f7425656bb4be499 260 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 4 252 8.2E-84 T 10-03-2017 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CpPa04_RS09120 c003bc81b9a671b6f7425656bb4be499 260 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 4 19 - T 10-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CpPa04_RS09120 c003bc81b9a671b6f7425656bb4be499 260 Gene3D G3DSA:3.20.20.20 2 256 4.5E-93 T 10-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CpPa04_RS09120 c003bc81b9a671b6f7425656bb4be499 260 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 38 51 - T 10-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CpPa04_RS04670 5bcf7b520a8c59bde82384fc9c1baa80 704 SUPERFAMILY SSF50249 20 196 1.46E-15 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS04670 5bcf7b520a8c59bde82384fc9c1baa80 704 Gene3D G3DSA:3.40.50.300 269 466 1.7E-56 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04670 5bcf7b520a8c59bde82384fc9c1baa80 704 Pfam PF00271 Helicase conserved C-terminal domain 493 600 1.3E-19 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS04670 5bcf7b520a8c59bde82384fc9c1baa80 704 Gene3D G3DSA:3.40.50.300 467 649 4.2E-44 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04670 5bcf7b520a8c59bde82384fc9c1baa80 704 Pfam PF00270 DEAD/DEAH box helicase 285 447 8.9E-18 T 10-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CpPa04_RS04670 5bcf7b520a8c59bde82384fc9c1baa80 704 SMART SM00490 515 600 5.2E-19 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS04670 5bcf7b520a8c59bde82384fc9c1baa80 704 Gene3D G3DSA:2.40.50.140 54 138 5.1E-13 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS04670 5bcf7b520a8c59bde82384fc9c1baa80 704 SUPERFAMILY SSF52540 330 612 1.19E-54 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04670 5bcf7b520a8c59bde82384fc9c1baa80 704 SMART SM00487 277 472 2.0E-31 T 10-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CpPa04_RS01680 78419e8d4d7dcb82b4181a83245c2b5c 329 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS01680 78419e8d4d7dcb82b4181a83245c2b5c 329 SUPERFAMILY SSF52540 3 225 5.05E-52 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01680 78419e8d4d7dcb82b4181a83245c2b5c 329 SMART SM00382 29 211 2.6E-9 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS01680 78419e8d4d7dcb82b4181a83245c2b5c 329 Gene3D G3DSA:3.40.50.300 2 225 2.4E-56 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01680 78419e8d4d7dcb82b4181a83245c2b5c 329 Pfam PF00005 ABC transporter 22 163 4.3E-23 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS02915 2685086c1823f6b0d794a02c4283a8b8 366 Gene3D G3DSA:1.20.58.410 1 112 4.5E-32 T 10-03-2017 CpPa04_RS02915 2685086c1823f6b0d794a02c4283a8b8 366 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 361 38.331 T 10-03-2017 IPR020853 Peptide chain release factor 2, bacterial GO:0005737|GO:0006415|GO:0016149 CpPa04_RS02915 2685086c1823f6b0d794a02c4283a8b8 366 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 4 360 4.5E-155 T 10-03-2017 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 CpPa04_RS02915 2685086c1823f6b0d794a02c4283a8b8 366 Pfam PF03462 PCRF domain 29 215 1.1E-57 T 10-03-2017 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CpPa04_RS02915 2685086c1823f6b0d794a02c4283a8b8 366 SUPERFAMILY SSF75620 28 363 4.97E-122 T 10-03-2017 CpPa04_RS02915 2685086c1823f6b0d794a02c4283a8b8 366 Pfam PF00472 RF-1 domain 225 333 4.2E-37 T 10-03-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CpPa04_RS02915 2685086c1823f6b0d794a02c4283a8b8 366 SMART SM00937 83 191 3.9E-43 T 10-03-2017 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CpPa04_RS02915 2685086c1823f6b0d794a02c4283a8b8 366 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 241 257 - T 10-03-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CpPa04_RS02915 2685086c1823f6b0d794a02c4283a8b8 366 Gene3D G3DSA:3.30.160.20 224 302 1.7E-34 T 10-03-2017 IPR014720 Double-stranded RNA-binding domain CpPa04_RS09405 01884573bd5d2fb61a3041aaf9fa9b7b 483 Gene3D G3DSA:1.20.140.10 353 462 3.2E-34 T 10-03-2017 CpPa04_RS09405 01884573bd5d2fb61a3041aaf9fa9b7b 483 PIRSF PIRSF000243 4 481 2.7E-154 T 10-03-2017 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 CpPa04_RS09405 01884573bd5d2fb61a3041aaf9fa9b7b 483 Pfam PF02335 Cytochrome c552 59 460 2.8E-132 T 10-03-2017 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 CpPa04_RS09405 01884573bd5d2fb61a3041aaf9fa9b7b 483 SUPERFAMILY SSF48695 52 460 3.24E-131 T 10-03-2017 IPR011031 Multihaem cytochrome CpPa04_RS09405 01884573bd5d2fb61a3041aaf9fa9b7b 483 Gene3D G3DSA:1.10.710.10 135 352 6.6E-16 T 10-03-2017 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 CpPa04_RS00895 b932ecb3cf9d365ed7f93d33b1ade8f1 187 SUPERFAMILY SSF88946 7 108 6.54E-22 T 10-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS00895 b932ecb3cf9d365ed7f93d33b1ade8f1 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 173 1.6E-20 T 10-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS00895 b932ecb3cf9d365ed7f93d33b1ade8f1 187 Gene3D G3DSA:1.10.1740.10 8 106 1.9E-21 T 10-03-2017 CpPa04_RS00895 b932ecb3cf9d365ed7f93d33b1ade8f1 187 Gene3D G3DSA:1.10.10.10 124 173 2.2E-15 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS00895 b932ecb3cf9d365ed7f93d33b1ade8f1 187 Pfam PF04542 Sigma-70 region 2 28 91 4.3E-12 T 10-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS00895 b932ecb3cf9d365ed7f93d33b1ade8f1 187 Pfam PF08281 Sigma-70, region 4 125 173 5.3E-13 T 10-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS00895 b932ecb3cf9d365ed7f93d33b1ade8f1 187 SUPERFAMILY SSF88659 122 174 1.29E-11 T 10-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS03290 4413015be7735f2430619e13beba3bb2 252 Pfam PF00005 ABC transporter 27 175 9.2E-38 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS03290 4413015be7735f2430619e13beba3bb2 252 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS03290 4413015be7735f2430619e13beba3bb2 252 SMART SM00382 36 223 1.9E-19 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS03290 4413015be7735f2430619e13beba3bb2 252 PIRSF PIRSF039085 9 251 6.0E-108 T 10-03-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CpPa04_RS03290 4413015be7735f2430619e13beba3bb2 252 Gene3D G3DSA:3.40.50.300 11 246 4.3E-84 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03290 4413015be7735f2430619e13beba3bb2 252 SUPERFAMILY SSF52540 11 245 1.23E-80 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04235 69610cec957dfa1c54856adf9403150b 449 Pfam PF00742 Homoserine dehydrogenase 155 338 5.5E-69 T 10-03-2017 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CpPa04_RS04235 69610cec957dfa1c54856adf9403150b 449 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 27 147 1.2E-23 T 10-03-2017 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CpPa04_RS04235 69610cec957dfa1c54856adf9403150b 449 SUPERFAMILY SSF55347 155 325 1.77E-52 T 10-03-2017 CpPa04_RS04235 69610cec957dfa1c54856adf9403150b 449 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 201 223 - T 10-03-2017 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CpPa04_RS04235 69610cec957dfa1c54856adf9403150b 449 SUPERFAMILY SSF55021 369 440 1.65E-10 T 10-03-2017 CpPa04_RS04235 69610cec957dfa1c54856adf9403150b 449 PIRSF PIRSF000098 18 449 2.9E-160 T 10-03-2017 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CpPa04_RS04235 69610cec957dfa1c54856adf9403150b 449 Gene3D G3DSA:3.30.70.260 371 442 7.4E-11 T 10-03-2017 CpPa04_RS04235 69610cec957dfa1c54856adf9403150b 449 Gene3D G3DSA:3.40.50.720 20 166 8.0E-47 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS04235 69610cec957dfa1c54856adf9403150b 449 Pfam PF01842 ACT domain 373 433 2.2E-11 T 10-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 CpPa04_RS04235 69610cec957dfa1c54856adf9403150b 449 Gene3D G3DSA:3.30.360.10 167 321 1.7E-56 T 10-03-2017 CpPa04_RS04235 69610cec957dfa1c54856adf9403150b 449 SUPERFAMILY SSF51735 19 176 3.21E-33 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS01270 2d0c5961567167085a10fb805bbbb33a 191 SUPERFAMILY SSF51569 9 152 1.88E-16 T 10-03-2017 CpPa04_RS01270 2d0c5961567167085a10fb805bbbb33a 191 Gene3D G3DSA:3.20.20.70 9 152 4.6E-23 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS06910 1fa0689f800024f2338098b85a7fad45 202 SUPERFAMILY SSF54211 6 90 4.3E-32 T 10-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CpPa04_RS06910 1fa0689f800024f2338098b85a7fad45 202 Gene3D G3DSA:3.30.230.40 94 202 8.3E-30 T 10-03-2017 CpPa04_RS06910 1fa0689f800024f2338098b85a7fad45 202 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 164 176 - T 10-03-2017 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CpPa04_RS06910 1fa0689f800024f2338098b85a7fad45 202 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 65 78 - T 10-03-2017 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CpPa04_RS06910 1fa0689f800024f2338098b85a7fad45 202 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 6 202 41.197 T 10-03-2017 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CpPa04_RS06910 1fa0689f800024f2338098b85a7fad45 202 Gene3D G3DSA:3.30.230.40 6 93 8.4E-36 T 10-03-2017 CpPa04_RS06910 1fa0689f800024f2338098b85a7fad45 202 SUPERFAMILY SSF54211 91 187 2.28E-29 T 10-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CpPa04_RS06910 1fa0689f800024f2338098b85a7fad45 202 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 35 182 1.3E-59 T 10-03-2017 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CpPa04_RS01185 e379bdada4e1cfc2c10991879c7c65e1 548 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 10-03-2017 IPR020845 AMP-binding, conserved site CpPa04_RS01185 e379bdada4e1cfc2c10991879c7c65e1 548 Gene3D G3DSA:2.30.38.10 376 447 7.5E-7 T 10-03-2017 CpPa04_RS01185 e379bdada4e1cfc2c10991879c7c65e1 548 Gene3D G3DSA:3.30.300.30 448 546 9.5E-23 T 10-03-2017 CpPa04_RS01185 e379bdada4e1cfc2c10991879c7c65e1 548 Pfam PF13193 AMP-binding enzyme C-terminal domain 463 540 1.9E-11 T 10-03-2017 IPR025110 AMP-binding enzyme C-terminal domain CpPa04_RS01185 e379bdada4e1cfc2c10991879c7c65e1 548 Gene3D G3DSA:3.40.50.980 218 366 9.4E-28 T 10-03-2017 CpPa04_RS01185 e379bdada4e1cfc2c10991879c7c65e1 548 SUPERFAMILY SSF56801 47 547 7.33E-97 T 10-03-2017 CpPa04_RS01185 e379bdada4e1cfc2c10991879c7c65e1 548 Pfam PF00501 AMP-binding enzyme 61 453 1.2E-49 T 10-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CpPa04_RS01185 e379bdada4e1cfc2c10991879c7c65e1 548 Gene3D G3DSA:3.40.50.980 54 217 2.6E-18 T 10-03-2017 CpPa04_RS06625 d6a5eb92cea1852cdfd96efc5b53d5f4 141 Pfam PF10939 Protein of unknown function (DUF2631) 7 68 3.0E-26 T 10-03-2017 IPR024341 Protein of unknown function DUF2631 CpPa04_RS06625 d6a5eb92cea1852cdfd96efc5b53d5f4 141 ProDom PD069408 TRANSMEMBRANE MEMBRANE RV2876/MT2944.1 CGL2017/CG2211 ML1584 POSSIBLE P20 10 66 2.0E-23 T 10-03-2017 IPR024341 Protein of unknown function DUF2631 CpPa04_RS09080 fb286732e4547337dd80f973f26f28e4 715 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 43 531 1.9E-172 T 10-03-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CpPa04_RS09080 fb286732e4547337dd80f973f26f28e4 715 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 81 531 4.7E-154 T 10-03-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CpPa04_RS09080 fb286732e4547337dd80f973f26f28e4 715 ProSitePatterns PS01303 BCCT family of transporters signature. 348 357 - T 10-03-2017 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 CpPa04_RS10405 a73fca76f4a4e894335fcf0ba182a2e7 633 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 7 167 1.3E-48 T 10-03-2017 IPR017500 Phage infection protein, YhgE, N-terminal CpPa04_RS10405 a73fca76f4a4e894335fcf0ba182a2e7 633 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 205 232 3.6E-7 T 10-03-2017 IPR023908 xxxLxxG heptad repeat CpPa04_RS10405 a73fca76f4a4e894335fcf0ba182a2e7 633 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 352 377 4.8E-5 T 10-03-2017 IPR023908 xxxLxxG heptad repeat CpPa04_RS10405 a73fca76f4a4e894335fcf0ba182a2e7 633 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 203 225 1.1E-5 T 10-03-2017 IPR023908 xxxLxxG heptad repeat CpPa04_RS10405 a73fca76f4a4e894335fcf0ba182a2e7 633 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 333 358 4.1E-6 T 10-03-2017 IPR023908 xxxLxxG heptad repeat CpPa04_RS10405 a73fca76f4a4e894335fcf0ba182a2e7 633 Pfam PF12698 ABC-2 family transporter protein 21 161 1.3E-8 T 10-03-2017 CpPa04_RS07175 e0c8e01730697170ec1b48932a78eb60 462 SUPERFAMILY SSF51569 8 461 1.1E-185 T 10-03-2017 CpPa04_RS07175 e0c8e01730697170ec1b48932a78eb60 462 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 31 462 4.1E-198 T 10-03-2017 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CpPa04_RS07175 e0c8e01730697170ec1b48932a78eb60 462 Pfam PF01474 Class-II DAHP synthetase family 31 457 1.2E-183 T 10-03-2017 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CpPa04_RS03725 54ecb8b6c4c9f6c9f7aa2c5781c485f7 231 SUPERFAMILY SSF53850 28 178 1.7E-10 T 10-03-2017 CpPa04_RS03725 54ecb8b6c4c9f6c9f7aa2c5781c485f7 231 Gene3D G3DSA:3.40.190.10 28 93 5.3E-8 T 10-03-2017 CpPa04_RS03725 54ecb8b6c4c9f6c9f7aa2c5781c485f7 231 Pfam PF03466 LysR substrate binding domain 29 99 4.8E-7 T 10-03-2017 IPR005119 LysR, substrate-binding CpPa04_RS03865 4d889a45cdd3a5caab538ef0d11a43fa 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 307 3.8E-36 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS03865 4d889a45cdd3a5caab538ef0d11a43fa 308 SUPERFAMILY SSF161098 91 289 6.0E-18 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS03865 4d889a45cdd3a5caab538ef0d11a43fa 308 Gene3D G3DSA:1.10.3720.10 88 302 6.3E-18 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS09445 c36492d9e2046d5e8895aefd7383d7cf 271 SMART SM00382 30 255 1.4E-10 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS09445 c36492d9e2046d5e8895aefd7383d7cf 271 SUPERFAMILY SSF52540 6 226 2.96E-51 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09445 c36492d9e2046d5e8895aefd7383d7cf 271 Pfam PF00005 ABC transporter 22 164 2.3E-19 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS09445 c36492d9e2046d5e8895aefd7383d7cf 271 Gene3D G3DSA:3.40.50.300 4 231 1.8E-58 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00145 0e35a0378a41bc76b60ec4e69ab784f6 355 Pfam PF01032 FecCD transport family 40 346 2.9E-79 T 10-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CpPa04_RS00145 0e35a0378a41bc76b60ec4e69ab784f6 355 Gene3D G3DSA:1.10.3470.10 27 352 8.1E-87 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS00145 0e35a0378a41bc76b60ec4e69ab784f6 355 SUPERFAMILY SSF81345 23 346 4.97E-69 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS09775 e4c8b2189f53331f4f375c1d13d9e878 396 Pfam PF00892 EamA-like transporter family 185 344 1.1E-8 T 10-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 CpPa04_RS09775 e4c8b2189f53331f4f375c1d13d9e878 396 Pfam PF00892 EamA-like transporter family 32 162 5.1E-12 T 10-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 CpPa04_RS09775 e4c8b2189f53331f4f375c1d13d9e878 396 SUPERFAMILY SSF103481 271 344 8.89E-9 T 10-03-2017 CpPa04_RS09775 e4c8b2189f53331f4f375c1d13d9e878 396 SUPERFAMILY SSF103481 64 162 1.57E-7 T 10-03-2017 CpPa04_RS00970 7b998aaad6d8c5f365ce42d0ac802f98 139 Pfam PF01899 Na+/H+ ion antiporter subunit 2 103 1.1E-19 T 10-03-2017 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 CpPa04_RS05935 bdae7cde0468ef97b887509b914eddd6 185 SUPERFAMILY SSF53271 16 174 2.75E-43 T 10-03-2017 IPR029057 Phosphoribosyltransferase-like CpPa04_RS05935 bdae7cde0468ef97b887509b914eddd6 185 Gene3D G3DSA:3.40.50.2020 11 175 3.2E-54 T 10-03-2017 IPR029057 Phosphoribosyltransferase-like CpPa04_RS05935 bdae7cde0468ef97b887509b914eddd6 185 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 13 181 33.631 T 10-03-2017 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 CpPa04_RS05935 bdae7cde0468ef97b887509b914eddd6 185 Pfam PF00156 Phosphoribosyl transferase domain 50 167 1.2E-13 T 10-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 CpPa04_RS07805 22cd432559bf9ac14b16f12c6e0b6f9c 423 Gene3D G3DSA:3.40.50.1820 5 400 4.5E-55 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS07805 22cd432559bf9ac14b16f12c6e0b6f9c 423 SUPERFAMILY SSF53474 9 399 6.85E-52 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS07805 22cd432559bf9ac14b16f12c6e0b6f9c 423 Pfam PF00135 Carboxylesterase family 69 202 3.2E-38 T 10-03-2017 IPR002018 Carboxylesterase, type B CpPa04_RS07805 22cd432559bf9ac14b16f12c6e0b6f9c 423 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 161 176 - T 10-03-2017 IPR019826 Carboxylesterase type B, active site CpPa04_RS04710 1d8f35d39b1c0d9ec3d62335d9a6c3ea 298 Gene3D G3DSA:3.40.190.10 246 281 2.4E-25 T 10-03-2017 CpPa04_RS04710 1d8f35d39b1c0d9ec3d62335d9a6c3ea 298 Gene3D G3DSA:3.40.190.10 56 136 2.4E-25 T 10-03-2017 CpPa04_RS04710 1d8f35d39b1c0d9ec3d62335d9a6c3ea 298 Gene3D G3DSA:3.40.190.10 137 245 4.0E-12 T 10-03-2017 CpPa04_RS04710 1d8f35d39b1c0d9ec3d62335d9a6c3ea 298 SMART SM00062 59 284 1.6E-20 T 10-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CpPa04_RS04710 1d8f35d39b1c0d9ec3d62335d9a6c3ea 298 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 65 281 2.8E-38 T 10-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CpPa04_RS04710 1d8f35d39b1c0d9ec3d62335d9a6c3ea 298 SUPERFAMILY SSF53850 7 281 1.74E-44 T 10-03-2017 CpPa04_RS04575 67cf2c127f425e34a55a2227a45333f6 372 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 99 370 4.9E-68 T 10-03-2017 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 CpPa04_RS04575 67cf2c127f425e34a55a2227a45333f6 372 Gene3D G3DSA:3.60.120.10 98 371 3.9E-74 T 10-03-2017 IPR005801 ADC synthase GO:0009058 CpPa04_RS04575 67cf2c127f425e34a55a2227a45333f6 372 Pfam PF00425 chorismate binding enzyme 102 362 1.4E-62 T 10-03-2017 IPR015890 Chorismate-utilising enzyme, C-terminal CpPa04_RS04575 67cf2c127f425e34a55a2227a45333f6 372 SUPERFAMILY SSF56322 29 371 2.22E-76 T 10-03-2017 IPR005801 ADC synthase GO:0009058 CpPa04_RS05975 1462628e41ac96a71c2c42acfcf7d347 250 SUPERFAMILY SSF75625 3 247 9.16E-88 T 10-03-2017 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS05975 1462628e41ac96a71c2c42acfcf7d347 250 Gene3D G3DSA:3.30.70.980 138 204 3.8E-21 T 10-03-2017 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS05975 1462628e41ac96a71c2c42acfcf7d347 250 Gene3D G3DSA:3.30.1270.10 84 137 1.8E-40 T 10-03-2017 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS05975 1462628e41ac96a71c2c42acfcf7d347 250 Gene3D G3DSA:3.30.1270.10 213 248 1.8E-40 T 10-03-2017 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS05975 1462628e41ac96a71c2c42acfcf7d347 250 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 240 34.049 T 10-03-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS05975 1462628e41ac96a71c2c42acfcf7d347 250 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 239 2.2E-95 T 10-03-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS05975 1462628e41ac96a71c2c42acfcf7d347 250 Gene3D G3DSA:1.10.10.200 1 79 6.4E-33 T 10-03-2017 IPR017856 Integrase, N-terminal zinc-binding domain-like CpPa04_RS05975 1462628e41ac96a71c2c42acfcf7d347 250 Pfam PF01709 Transcriptional regulator 5 238 9.2E-88 T 10-03-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS05075 11d631a7d33c9ee7d26367b993b155f5 143 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 53 138 5.5E-19 T 10-03-2017 IPR032030 YscD, cytoplasmic domain CpPa04_RS05075 11d631a7d33c9ee7d26367b993b155f5 143 SUPERFAMILY SSF49879 33 138 2.1E-31 T 10-03-2017 IPR008984 SMAD/FHA domain GO:0005515 CpPa04_RS05075 11d631a7d33c9ee7d26367b993b155f5 143 SMART SM00240 67 117 8.4E-15 T 10-03-2017 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CpPa04_RS05075 11d631a7d33c9ee7d26367b993b155f5 143 Gene3D G3DSA:2.60.200.20 44 139 5.4E-29 T 10-03-2017 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CpPa04_RS10230 d7481251995d9cd790609a867e279a6c 327 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 155 169 - T 10-03-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CpPa04_RS10230 d7481251995d9cd790609a867e279a6c 327 Pfam PF00849 RNA pseudouridylate synthase 116 276 1.1E-23 T 10-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CpPa04_RS10230 d7481251995d9cd790609a867e279a6c 327 SUPERFAMILY SSF55120 101 326 7.36E-47 T 10-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CpPa04_RS01190 2c03b6e5e168daf6f70ebb9a876eb056 269 Gene3D G3DSA:3.40.50.1110 27 268 4.3E-35 T 10-03-2017 IPR013830 SGNH hydrolase-type esterase domain CpPa04_RS01190 2c03b6e5e168daf6f70ebb9a876eb056 269 SUPERFAMILY SSF52266 30 267 4.83E-38 T 10-03-2017 IPR013830 SGNH hydrolase-type esterase domain CpPa04_RS01190 2c03b6e5e168daf6f70ebb9a876eb056 269 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 33 261 1.3E-19 T 10-03-2017 IPR013830 SGNH hydrolase-type esterase domain CpPa04_RS10050 77f833dcf632806f75d0ed73ee30f8c1 221 SMART SM00855 6 174 1.1E-17 T 10-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 CpPa04_RS10050 77f833dcf632806f75d0ed73ee30f8c1 221 Gene3D G3DSA:3.40.50.1240 6 217 1.9E-37 T 10-03-2017 IPR029033 Histidine phosphatase superfamily CpPa04_RS10050 77f833dcf632806f75d0ed73ee30f8c1 221 SUPERFAMILY SSF53254 5 216 1.27E-41 T 10-03-2017 IPR029033 Histidine phosphatase superfamily CpPa04_RS10050 77f833dcf632806f75d0ed73ee30f8c1 221 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 7 215 6.6E-33 T 10-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 CpPa04_RS06320 1ecd1e39d83f0320614d373edd02c1e5 297 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 11 292 29.271 T 10-03-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CpPa04_RS06320 1ecd1e39d83f0320614d373edd02c1e5 297 Pfam PF01678 Diaminopimelate epimerase 169 283 1.4E-23 T 10-03-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CpPa04_RS06320 1ecd1e39d83f0320614d373edd02c1e5 297 Pfam PF01678 Diaminopimelate epimerase 13 150 2.4E-35 T 10-03-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CpPa04_RS06320 1ecd1e39d83f0320614d373edd02c1e5 297 SUPERFAMILY SSF54506 160 290 3.36E-29 T 10-03-2017 CpPa04_RS06320 1ecd1e39d83f0320614d373edd02c1e5 297 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 11 290 6.3E-68 T 10-03-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CpPa04_RS06320 1ecd1e39d83f0320614d373edd02c1e5 297 SUPERFAMILY SSF54506 11 151 1.32E-33 T 10-03-2017 CpPa04_RS06320 1ecd1e39d83f0320614d373edd02c1e5 297 Gene3D G3DSA:3.10.310.10 11 147 1.1E-40 T 10-03-2017 CpPa04_RS06320 1ecd1e39d83f0320614d373edd02c1e5 297 Gene3D G3DSA:3.10.310.10 148 278 2.1E-33 T 10-03-2017 CpPa04_RS06320 1ecd1e39d83f0320614d373edd02c1e5 297 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 88 102 - T 10-03-2017 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CpPa04_RS02315 a0a452ae2b760e00d323ec82f4a386a2 351 SUPERFAMILY SSF53807 74 347 1.18E-41 T 10-03-2017 CpPa04_RS02315 a0a452ae2b760e00d323ec82f4a386a2 351 Pfam PF01497 Periplasmic binding protein 96 324 4.2E-47 T 10-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CpPa04_RS02315 a0a452ae2b760e00d323ec82f4a386a2 351 Gene3D G3DSA:3.40.50.1980 87 202 3.5E-17 T 10-03-2017 CpPa04_RS02315 a0a452ae2b760e00d323ec82f4a386a2 351 Gene3D G3DSA:3.40.50.1980 203 347 7.2E-15 T 10-03-2017 CpPa04_RS07335 aa69429ad81d23c24cdb4ec130d3c397 478 Pfam PF00120 Glutamine synthetase, catalytic domain 106 475 5.4E-133 T 10-03-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CpPa04_RS07335 aa69429ad81d23c24cdb4ec130d3c397 478 ProSitePatterns PS00180 Glutamine synthetase signature 1. 53 71 - T 10-03-2017 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CpPa04_RS07335 aa69429ad81d23c24cdb4ec130d3c397 478 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 98 1.2E-26 T 10-03-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CpPa04_RS07335 aa69429ad81d23c24cdb4ec130d3c397 478 Gene3D G3DSA:3.30.590.10 109 458 2.5E-135 T 10-03-2017 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CpPa04_RS07335 aa69429ad81d23c24cdb4ec130d3c397 478 SMART SM01230 105 387 1.3E-145 T 10-03-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CpPa04_RS07335 aa69429ad81d23c24cdb4ec130d3c397 478 SUPERFAMILY SSF54368 5 102 1.7E-32 T 10-03-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CpPa04_RS07335 aa69429ad81d23c24cdb4ec130d3c397 478 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 477 1.5E-195 T 10-03-2017 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CpPa04_RS07335 aa69429ad81d23c24cdb4ec130d3c397 478 SUPERFAMILY SSF55931 106 478 2.06E-138 T 10-03-2017 CpPa04_RS07335 aa69429ad81d23c24cdb4ec130d3c397 478 Gene3D G3DSA:3.10.20.70 6 108 2.2E-36 T 10-03-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CpPa04_RS07335 aa69429ad81d23c24cdb4ec130d3c397 478 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 265 280 - T 10-03-2017 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CpPa04_RS05645 b0f5d741b5a579cbed6efadda0e5fbf3 342 Hamap MF_00973 Gluconeogenesis factor. 16 334 31.061 T 10-03-2017 IPR010119 Gluconeogenesis factor CpPa04_RS05645 b0f5d741b5a579cbed6efadda0e5fbf3 342 Pfam PF01933 Uncharacterised protein family UPF0052 21 313 2.8E-63 T 10-03-2017 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 CpPa04_RS05645 b0f5d741b5a579cbed6efadda0e5fbf3 342 Gene3D G3DSA:3.40.50.10680 94 329 1.4E-37 T 10-03-2017 CpPa04_RS05645 b0f5d741b5a579cbed6efadda0e5fbf3 342 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 20 328 1.6E-84 T 10-03-2017 IPR010119 Gluconeogenesis factor CpPa04_RS05645 b0f5d741b5a579cbed6efadda0e5fbf3 342 SUPERFAMILY SSF142338 17 328 5.49E-78 T 10-03-2017 CpPa04_RS03535 3ae6b033b2dd3234a88585d0b6a3b7c3 544 SUPERFAMILY SSF52540 8 284 1.53E-72 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03535 3ae6b033b2dd3234a88585d0b6a3b7c3 544 Gene3D G3DSA:3.30.70.870 411 480 1.8E-7 T 10-03-2017 CpPa04_RS03535 3ae6b033b2dd3234a88585d0b6a3b7c3 544 Gene3D G3DSA:3.40.50.300 6 287 1.2E-61 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03535 3ae6b033b2dd3234a88585d0b6a3b7c3 544 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 2 537 3.6E-148 T 10-03-2017 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 CpPa04_RS03535 3ae6b033b2dd3234a88585d0b6a3b7c3 544 Pfam PF16658 Class II release factor RF3, C-terminal domain 403 528 3.7E-38 T 10-03-2017 IPR032090 Peptide chain release factor 3, C-terminal CpPa04_RS03535 3ae6b033b2dd3234a88585d0b6a3b7c3 544 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 10-03-2017 IPR031157 Tr-type G domain, conserved site CpPa04_RS03535 3ae6b033b2dd3234a88585d0b6a3b7c3 544 SUPERFAMILY SSF50447 268 409 8.7E-22 T 10-03-2017 IPR009000 Translation protein, beta-barrel domain CpPa04_RS03535 3ae6b033b2dd3234a88585d0b6a3b7c3 544 SUPERFAMILY SSF54980 409 483 9.35E-12 T 10-03-2017 IPR009022 Elongation factor G, III-V domain CpPa04_RS03535 3ae6b033b2dd3234a88585d0b6a3b7c3 544 Gene3D G3DSA:2.40.30.10 309 410 1.9E-18 T 10-03-2017 CpPa04_RS03535 3ae6b033b2dd3234a88585d0b6a3b7c3 544 PRINTS PR00315 GTP-binding elongation factor signature 13 26 1.9E-10 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS03535 3ae6b033b2dd3234a88585d0b6a3b7c3 544 PRINTS PR00315 GTP-binding elongation factor signature 142 151 1.9E-10 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS03535 3ae6b033b2dd3234a88585d0b6a3b7c3 544 PRINTS PR00315 GTP-binding elongation factor signature 90 100 1.9E-10 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS03535 3ae6b033b2dd3234a88585d0b6a3b7c3 544 PRINTS PR00315 GTP-binding elongation factor signature 106 117 1.9E-10 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS03535 3ae6b033b2dd3234a88585d0b6a3b7c3 544 PRINTS PR00315 GTP-binding elongation factor signature 63 71 1.9E-10 T 10-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CpPa04_RS03535 3ae6b033b2dd3234a88585d0b6a3b7c3 544 Pfam PF00009 Elongation factor Tu GTP binding domain 11 283 1.1E-48 T 10-03-2017 CpPa04_RS03535 3ae6b033b2dd3234a88585d0b6a3b7c3 544 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 155 3.4E-24 T 10-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CpPa04_RS03535 3ae6b033b2dd3234a88585d0b6a3b7c3 544 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 542 46.662 T 10-03-2017 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 CpPa04_RS03075 192a2db89496836c4cb4818f2bb668d6 377 PIRSF PIRSF000525 7 372 2.9E-74 T 10-03-2017 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CpPa04_RS03075 192a2db89496836c4cb4818f2bb668d6 377 Gene3D G3DSA:3.90.1150.10 267 370 3.4E-6 T 10-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CpPa04_RS03075 192a2db89496836c4cb4818f2bb668d6 377 TIGRFAM TIGR01366 serC_3: putative phosphoserine aminotransferase 12 371 7.2E-193 T 10-03-2017 IPR006272 Phosphoserine aminotransferase, Mycobacterial-type GO:0004648|GO:0006564|GO:0009058 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52 CpPa04_RS03075 192a2db89496836c4cb4818f2bb668d6 377 Gene3D G3DSA:3.40.640.10 22 266 2.7E-51 T 10-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CpPa04_RS03075 192a2db89496836c4cb4818f2bb668d6 377 SUPERFAMILY SSF53383 17 370 5.21E-75 T 10-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase CpPa04_RS03075 192a2db89496836c4cb4818f2bb668d6 377 Pfam PF00266 Aminotransferase class-V 36 331 5.9E-16 T 10-03-2017 IPR000192 Aminotransferase class V domain CpPa04_RS04450 d1d43e00778c61d62e4da2320f6986b7 353 SUPERFAMILY SSF81345 12 344 4.32E-80 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS04450 d1d43e00778c61d62e4da2320f6986b7 353 Pfam PF01032 FecCD transport family 26 343 1.2E-93 T 10-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CpPa04_RS04450 d1d43e00778c61d62e4da2320f6986b7 353 Gene3D G3DSA:1.10.3470.10 15 346 5.4E-104 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS07750 2642152524318e6e7ee67654d094d6de 196 Gene3D G3DSA:3.40.390.30 2 147 7.1E-39 T 10-03-2017 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 CpPa04_RS07750 2642152524318e6e7ee67654d094d6de 196 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 120 130 - T 10-03-2017 IPR020549 Endoribonuclease YbeY, conserved site CpPa04_RS07750 2642152524318e6e7ee67654d094d6de 196 Pfam PF02130 Uncharacterized protein family UPF0054 21 147 6.6E-34 T 10-03-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CpPa04_RS07750 2642152524318e6e7ee67654d094d6de 196 SUPERFAMILY SSF55486 5 148 5.13E-37 T 10-03-2017 CpPa04_RS07750 2642152524318e6e7ee67654d094d6de 196 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 37 148 1.1E-30 T 10-03-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CpPa04_RS07750 2642152524318e6e7ee67654d094d6de 196 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 161 19.769 T 10-03-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CpPa04_RS10180 6adcfc13575aa1ac8879df5c002a590c 106 ProDom PD026347 LSR2-LIKE LSR2 ANTIGEN IMMUNE PRECURSOR RESPONSE SIGNAL PLASMID LYSYL GP61 1 103 3.0E-24 T 10-03-2017 IPR024412 Lsr2 CpPa04_RS10180 6adcfc13575aa1ac8879df5c002a590c 106 Pfam PF11774 Lsr2 1 103 1.9E-27 T 10-03-2017 IPR024412 Lsr2 CpPa04_RS00360 cf4ed81026263f30ef4677d8c17c7448 339 SUPERFAMILY SSF53067 88 204 6.59E-11 T 10-03-2017 CpPa04_RS00360 cf4ed81026263f30ef4677d8c17c7448 339 Gene3D G3DSA:1.10.10.10 23 83 6.0E-11 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS00360 cf4ed81026263f30ef4677d8c17c7448 339 Gene3D G3DSA:3.30.420.40 90 207 2.4E-13 T 10-03-2017 CpPa04_RS00360 cf4ed81026263f30ef4677d8c17c7448 339 SUPERFAMILY SSF46785 20 82 1.36E-7 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS00360 cf4ed81026263f30ef4677d8c17c7448 339 Pfam PF00480 ROK family 103 218 2.1E-9 T 10-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CpPa04_RS07265 2235f16a0fc12c29b94b0a4999580894 354 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 12 344 32.771 T 10-03-2017 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CpPa04_RS07265 2235f16a0fc12c29b94b0a4999580894 354 Gene3D G3DSA:1.10.1610.10 5 73 1.1E-25 T 10-03-2017 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CpPa04_RS07265 2235f16a0fc12c29b94b0a4999580894 354 SUPERFAMILY SSF52733 5 343 6.54E-103 T 10-03-2017 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CpPa04_RS07265 2235f16a0fc12c29b94b0a4999580894 354 Gene3D G3DSA:3.40.50.10210 74 325 4.9E-94 T 10-03-2017 CpPa04_RS07265 2235f16a0fc12c29b94b0a4999580894 354 Pfam PF02277 Phosphoribosyltransferase 10 342 7.9E-120 T 10-03-2017 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CpPa04_RS07265 2235f16a0fc12c29b94b0a4999580894 354 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 14 342 9.4E-116 T 10-03-2017 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CpPa04_RS01535 60eed1a3f0e54fe50fb44f0921c8710b 232 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 135 149 - T 10-03-2017 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CpPa04_RS01535 60eed1a3f0e54fe50fb44f0921c8710b 232 Pfam PF01209 ubiE/COQ5 methyltransferase family 12 227 2.1E-60 T 10-03-2017 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CpPa04_RS01535 60eed1a3f0e54fe50fb44f0921c8710b 232 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 13 227 3.6E-71 T 10-03-2017 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CpPa04_RS01535 60eed1a3f0e54fe50fb44f0921c8710b 232 Gene3D G3DSA:3.40.50.150 13 223 1.2E-47 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS01535 60eed1a3f0e54fe50fb44f0921c8710b 232 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 24 39 - T 10-03-2017 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CpPa04_RS01535 60eed1a3f0e54fe50fb44f0921c8710b 232 SUPERFAMILY SSF53335 12 221 5.37E-43 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS01535 60eed1a3f0e54fe50fb44f0921c8710b 232 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 4 227 33.966 T 10-03-2017 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CpPa04_RS01775 7146469a0932ea77fa76cfad90503cb5 101 SMART SM01403 7 101 1.9E-54 T 10-03-2017 IPR027486 Ribosomal protein S10 domain CpPa04_RS01775 7146469a0932ea77fa76cfad90503cb5 101 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 6.1E-21 T 10-03-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01775 7146469a0932ea77fa76cfad90503cb5 101 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 6.1E-21 T 10-03-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01775 7146469a0932ea77fa76cfad90503cb5 101 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 6.1E-21 T 10-03-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01775 7146469a0932ea77fa76cfad90503cb5 101 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 8.0E-34 T 10-03-2017 IPR027486 Ribosomal protein S10 domain CpPa04_RS01775 7146469a0932ea77fa76cfad90503cb5 101 Gene3D G3DSA:3.30.70.600 4 100 6.9E-42 T 10-03-2017 IPR027486 Ribosomal protein S10 domain CpPa04_RS01775 7146469a0932ea77fa76cfad90503cb5 101 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 101 24.533 T 10-03-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01775 7146469a0932ea77fa76cfad90503cb5 101 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 10-03-2017 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01775 7146469a0932ea77fa76cfad90503cb5 101 SUPERFAMILY SSF54999 5 100 3.66E-36 T 10-03-2017 IPR027486 Ribosomal protein S10 domain CpPa04_RS01775 7146469a0932ea77fa76cfad90503cb5 101 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 2.8E-45 T 10-03-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS05380 f529dc2ea56c68ad4907c5a7ccf2b320 178 Pfam PF01161 Phosphatidylethanolamine-binding protein 44 173 5.8E-32 T 10-03-2017 IPR008914 Phosphatidylethanolamine-binding protein CpPa04_RS05380 f529dc2ea56c68ad4907c5a7ccf2b320 178 SUPERFAMILY SSF49777 23 176 4.19E-44 T 10-03-2017 IPR008914 Phosphatidylethanolamine-binding protein CpPa04_RS05380 f529dc2ea56c68ad4907c5a7ccf2b320 178 Gene3D G3DSA:3.90.280.10 24 176 1.7E-46 T 10-03-2017 IPR008914 Phosphatidylethanolamine-binding protein CpPa04_RS05380 f529dc2ea56c68ad4907c5a7ccf2b320 178 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 46 169 7.7E-34 T 10-03-2017 IPR005247 YbhB/YbcL CpPa04_RS01955 3b7755058e6c12120cf0efd83558a8fc 378 SUPERFAMILY SSF52540 5 245 2.3E-84 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01955 3b7755058e6c12120cf0efd83558a8fc 378 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS01955 3b7755058e6c12120cf0efd83558a8fc 378 Pfam PF00005 ABC transporter 22 163 2.5E-32 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS01955 3b7755058e6c12120cf0efd83558a8fc 378 SUPERFAMILY SSF50331 238 376 9.07E-19 T 10-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal CpPa04_RS01955 3b7755058e6c12120cf0efd83558a8fc 378 Gene3D G3DSA:2.40.50.140 283 360 2.2E-7 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS01955 3b7755058e6c12120cf0efd83558a8fc 378 SMART SM00382 30 212 2.7E-11 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS01955 3b7755058e6c12120cf0efd83558a8fc 378 Gene3D G3DSA:3.40.50.300 4 236 7.4E-76 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00710 8bd62bf3b91599f145b4f6135433fbe1 413 Gene3D G3DSA:3.20.20.105 4 411 1.8E-131 T 10-03-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CpPa04_RS00710 8bd62bf3b91599f145b4f6135433fbe1 413 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 17 410 2.9E-118 T 10-03-2017 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CpPa04_RS00710 8bd62bf3b91599f145b4f6135433fbe1 413 SUPERFAMILY SSF51713 16 409 2.09E-116 T 10-03-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CpPa04_RS00710 8bd62bf3b91599f145b4f6135433fbe1 413 Pfam PF01702 Queuine tRNA-ribosyltransferase 159 405 5.5E-72 T 10-03-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CpPa04_RS00710 8bd62bf3b91599f145b4f6135433fbe1 413 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 17 409 9.6E-113 T 10-03-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CpPa04_RS02295 c07ccf147ad7674f3c784b1c8b720c46 366 SMART SM00507 253 305 0.0021 T 10-03-2017 IPR003615 HNH nuclease CpPa04_RS05290 16cf24c4ffd32175a09d4b6a039fe860 438 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 24 434 5.9E-116 T 10-03-2017 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CpPa04_RS05290 16cf24c4ffd32175a09d4b6a039fe860 438 SUPERFAMILY SSF101821 98 213 5.49E-26 T 10-03-2017 CpPa04_RS05290 16cf24c4ffd32175a09d4b6a039fe860 438 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 271 289 1.8E-33 T 10-03-2017 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CpPa04_RS05290 16cf24c4ffd32175a09d4b6a039fe860 438 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 119 139 1.8E-33 T 10-03-2017 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CpPa04_RS05290 16cf24c4ffd32175a09d4b6a039fe860 438 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 314 330 1.8E-33 T 10-03-2017 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CpPa04_RS05290 16cf24c4ffd32175a09d4b6a039fe860 438 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 403 418 1.8E-33 T 10-03-2017 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CpPa04_RS05290 16cf24c4ffd32175a09d4b6a039fe860 438 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 86 102 1.8E-33 T 10-03-2017 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CpPa04_RS05290 16cf24c4ffd32175a09d4b6a039fe860 438 Gene3D G3DSA:2.30.250.10 97 220 5.6E-33 T 10-03-2017 IPR023358 Peptidase M18, domain 2 GO:0004177 CpPa04_RS05290 16cf24c4ffd32175a09d4b6a039fe860 438 SUPERFAMILY SSF53187 214 436 2.51E-93 T 10-03-2017 CpPa04_RS05290 16cf24c4ffd32175a09d4b6a039fe860 438 SUPERFAMILY SSF53187 9 97 2.51E-93 T 10-03-2017 CpPa04_RS05290 16cf24c4ffd32175a09d4b6a039fe860 438 Gene3D G3DSA:3.40.630.10 15 96 7.7E-102 T 10-03-2017 CpPa04_RS05290 16cf24c4ffd32175a09d4b6a039fe860 438 Gene3D G3DSA:3.40.630.10 223 436 7.7E-102 T 10-03-2017 CpPa04_RS10635 6dab1bed9f11bed0b01a6fdc30a875e9 487 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 193 253 6.5E-16 T 10-03-2017 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CpPa04_RS10635 6dab1bed9f11bed0b01a6fdc30a875e9 487 SUPERFAMILY SSF81891 164 475 2.09E-61 T 10-03-2017 CpPa04_RS10635 6dab1bed9f11bed0b01a6fdc30a875e9 487 SUPERFAMILY SSF81301 27 161 1.96E-34 T 10-03-2017 CpPa04_RS10635 6dab1bed9f11bed0b01a6fdc30a875e9 487 Pfam PF01966 HD domain 268 355 5.5E-11 T 10-03-2017 IPR006674 HD domain CpPa04_RS10635 6dab1bed9f11bed0b01a6fdc30a875e9 487 Pfam PF01743 Poly A polymerase head domain 38 164 1.5E-31 T 10-03-2017 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CpPa04_RS10635 6dab1bed9f11bed0b01a6fdc30a875e9 487 Gene3D G3DSA:1.10.3090.10 163 351 3.2E-50 T 10-03-2017 CpPa04_RS10635 6dab1bed9f11bed0b01a6fdc30a875e9 487 Gene3D G3DSA:1.10.3090.10 419 441 3.2E-50 T 10-03-2017 CpPa04_RS10635 6dab1bed9f11bed0b01a6fdc30a875e9 487 TIGRFAM TIGR00277 HDIG: HDIG domain 264 344 4.5E-15 T 10-03-2017 IPR006675 HDIG domain CpPa04_RS10635 6dab1bed9f11bed0b01a6fdc30a875e9 487 TIGRFAM TIGR02692 tRNA_CCA_actino: CCA tRNA nucleotidyltransferase 10 473 9.5E-252 T 10-03-2017 IPR014065 tRNA adenylyltransferase CpPa04_RS10635 6dab1bed9f11bed0b01a6fdc30a875e9 487 Gene3D G3DSA:3.30.460.10 17 161 1.7E-40 T 10-03-2017 CpPa04_RS03540 f9c352687cce48abaaf05f9b0c576db6 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 9.3E-16 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS03540 f9c352687cce48abaaf05f9b0c576db6 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 134 9.3E-16 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS03540 f9c352687cce48abaaf05f9b0c576db6 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 9.3E-16 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS03540 f9c352687cce48abaaf05f9b0c576db6 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 9.3E-16 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS03540 f9c352687cce48abaaf05f9b0c576db6 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 9.3E-16 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS03540 f9c352687cce48abaaf05f9b0c576db6 284 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 193 4.7E-5 T 10-03-2017 CpPa04_RS03540 f9c352687cce48abaaf05f9b0c576db6 284 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 10-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CpPa04_RS03540 f9c352687cce48abaaf05f9b0c576db6 284 SUPERFAMILY SSF51735 2 238 1.39E-46 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS03540 f9c352687cce48abaaf05f9b0c576db6 284 Gene3D G3DSA:3.40.50.720 2 244 3.4E-48 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS03540 f9c352687cce48abaaf05f9b0c576db6 284 Pfam PF00106 short chain dehydrogenase 3 197 8.0E-30 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS04230 8646d45883b0853c48b56f87b4ffaf9a 443 Gene3D G3DSA:2.40.37.10 289 441 8.1E-46 T 10-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CpPa04_RS04230 8646d45883b0853c48b56f87b4ffaf9a 443 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 69 87 - T 10-03-2017 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CpPa04_RS04230 8646d45883b0853c48b56f87b4ffaf9a 443 PRINTS PR01181 Diaminopimelate decarboxylase signature 326 344 2.4E-26 T 10-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CpPa04_RS04230 8646d45883b0853c48b56f87b4ffaf9a 443 PRINTS PR01181 Diaminopimelate decarboxylase signature 87 104 2.4E-26 T 10-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CpPa04_RS04230 8646d45883b0853c48b56f87b4ffaf9a 443 PRINTS PR01181 Diaminopimelate decarboxylase signature 409 431 2.4E-26 T 10-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CpPa04_RS04230 8646d45883b0853c48b56f87b4ffaf9a 443 PRINTS PR01181 Diaminopimelate decarboxylase signature 176 185 2.4E-26 T 10-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CpPa04_RS04230 8646d45883b0853c48b56f87b4ffaf9a 443 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 310 418 7.1E-14 T 10-03-2017 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CpPa04_RS04230 8646d45883b0853c48b56f87b4ffaf9a 443 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 28 442 38.839 T 10-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CpPa04_RS04230 8646d45883b0853c48b56f87b4ffaf9a 443 Gene3D G3DSA:3.20.20.10 47 288 4.1E-86 T 10-03-2017 IPR029066 PLP-binding barrel CpPa04_RS04230 8646d45883b0853c48b56f87b4ffaf9a 443 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 46 303 2.3E-71 T 10-03-2017 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CpPa04_RS04230 8646d45883b0853c48b56f87b4ffaf9a 443 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 18 441 3.8E-140 T 10-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CpPa04_RS04230 8646d45883b0853c48b56f87b4ffaf9a 443 SUPERFAMILY SSF51419 39 305 3.43E-74 T 10-03-2017 IPR029066 PLP-binding barrel CpPa04_RS04230 8646d45883b0853c48b56f87b4ffaf9a 443 SUPERFAMILY SSF50621 282 441 6.49E-44 T 10-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CpPa04_RS04230 8646d45883b0853c48b56f87b4ffaf9a 443 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 204 217 3.0E-17 T 10-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CpPa04_RS04230 8646d45883b0853c48b56f87b4ffaf9a 443 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 399 412 3.0E-17 T 10-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CpPa04_RS04230 8646d45883b0853c48b56f87b4ffaf9a 443 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 293 312 3.0E-17 T 10-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CpPa04_RS04230 8646d45883b0853c48b56f87b4ffaf9a 443 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 69 87 3.0E-17 T 10-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CpPa04_RS04230 8646d45883b0853c48b56f87b4ffaf9a 443 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 89 101 3.0E-17 T 10-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CpPa04_RS04230 8646d45883b0853c48b56f87b4ffaf9a 443 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 240 256 - T 10-03-2017 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CpPa04_RS09185 7b903d7213533e0633cf5d9f4f475e6b 298 SUPERFAMILY SSF52540 83 269 1.49E-25 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09185 7b903d7213533e0633cf5d9f4f475e6b 298 Gene3D G3DSA:3.40.50.300 44 295 1.9E-100 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09185 7b903d7213533e0633cf5d9f4f475e6b 298 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 52 277 2.0E-97 T 10-03-2017 IPR022488 Polyphosphate kinase-2-related CpPa04_RS09185 7b903d7213533e0633cf5d9f4f475e6b 298 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 51 278 1.0E-109 T 10-03-2017 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 CpPa04_RS04820 f31241ce3e5b7c653076f8e27f54ecb0 347 SUPERFAMILY SSF55347 151 315 3.53E-46 T 10-03-2017 CpPa04_RS04820 f31241ce3e5b7c653076f8e27f54ecb0 347 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 146 162 - T 10-03-2017 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CpPa04_RS04820 f31241ce3e5b7c653076f8e27f54ecb0 347 SMART SM00859 4 143 1.1E-37 T 10-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CpPa04_RS04820 f31241ce3e5b7c653076f8e27f54ecb0 347 Gene3D G3DSA:3.40.50.720 1 159 2.6E-50 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS04820 f31241ce3e5b7c653076f8e27f54ecb0 347 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 142 5.9E-24 T 10-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CpPa04_RS04820 f31241ce3e5b7c653076f8e27f54ecb0 347 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 3 341 37.045 T 10-03-2017 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CpPa04_RS04820 f31241ce3e5b7c653076f8e27f54ecb0 347 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 347 2.3E-109 T 10-03-2017 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CpPa04_RS04820 f31241ce3e5b7c653076f8e27f54ecb0 347 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 164 318 8.0E-18 T 10-03-2017 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CpPa04_RS04820 f31241ce3e5b7c653076f8e27f54ecb0 347 SUPERFAMILY SSF51735 3 173 1.5E-41 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS04820 f31241ce3e5b7c653076f8e27f54ecb0 347 Gene3D G3DSA:3.30.360.10 160 315 4.6E-53 T 10-03-2017 CpPa04_RS10100 58baf9eeca3ce03e0b150884ef6df2f3 404 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 2.4E-24 T 10-03-2017 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 CpPa04_RS10100 58baf9eeca3ce03e0b150884ef6df2f3 404 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 194 401 2.0E-64 T 10-03-2017 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 CpPa04_RS09115 0e2eca838fab8fa378bb416f0d0c67bd 113 Gene3D G3DSA:3.30.1130.10 1 113 1.9E-38 T 10-03-2017 CpPa04_RS09115 0e2eca838fab8fa378bb416f0d0c67bd 113 TIGRFAM TIGR00526 folB_dom: FolB domain 1 113 2.1E-27 T 10-03-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CpPa04_RS09115 0e2eca838fab8fa378bb416f0d0c67bd 113 Pfam PF02152 Dihydroneopterin aldolase 4 110 3.8E-31 T 10-03-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CpPa04_RS09115 0e2eca838fab8fa378bb416f0d0c67bd 113 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 112 8.4E-34 T 10-03-2017 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CpPa04_RS09115 0e2eca838fab8fa378bb416f0d0c67bd 113 SMART SM00905 4 113 5.8E-42 T 10-03-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CpPa04_RS09115 0e2eca838fab8fa378bb416f0d0c67bd 113 SUPERFAMILY SSF55620 1 113 4.28E-32 T 10-03-2017 CpPa04_RS06850 922e5c2cc4c3856d0aa37d23488a0d2c 191 Pfam PF10517 Electron transfer DM13 85 190 2.1E-27 T 10-03-2017 IPR019545 DM13 domain CpPa04_RS02485 69ccff40c398bb9621498b6014d992fa 543 Gene3D G3DSA:3.90.226.10 290 543 2.2E-96 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS02485 69ccff40c398bb9621498b6014d992fa 543 Gene3D G3DSA:3.90.226.10 14 273 8.1E-77 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS02485 69ccff40c398bb9621498b6014d992fa 543 Pfam PF01039 Carboxyl transferase domain 45 541 1.2E-198 T 10-03-2017 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CpPa04_RS02485 69ccff40c398bb9621498b6014d992fa 543 SUPERFAMILY SSF52096 291 543 2.69E-84 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS02485 69ccff40c398bb9621498b6014d992fa 543 SUPERFAMILY SSF52096 22 271 8.41E-73 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS00155 ada337ece7b0c1246439dbc21b74ea35 89 Hamap MF_00631 Cell division protein CrgA [crgA]. 1 89 23.08 T 10-03-2017 IPR009619 Cell division protein CrgA CpPa04_RS00155 ada337ece7b0c1246439dbc21b74ea35 89 Pfam PF06781 Uncharacterised protein family (UPF0233) 1 89 3.5E-32 T 10-03-2017 IPR009619 Cell division protein CrgA CpPa04_RS02055 3f477e7caa7475832e8fe10bde893422 105 Pfam PF06013 Proteins of 100 residues with WXG 4 88 7.1E-20 T 10-03-2017 IPR010310 Type VII secretion system ESAT-6-like CpPa04_RS02055 3f477e7caa7475832e8fe10bde893422 105 SUPERFAMILY SSF140453 3 97 1.83E-23 T 10-03-2017 IPR010310 Type VII secretion system ESAT-6-like CpPa04_RS02055 3f477e7caa7475832e8fe10bde893422 105 Gene3D G3DSA:1.10.287.1060 1 98 1.9E-27 T 10-03-2017 CpPa04_RS02055 3f477e7caa7475832e8fe10bde893422 105 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 4 92 1.7E-23 T 10-03-2017 IPR010310 Type VII secretion system ESAT-6-like CpPa04_RS08975 508242971e4cc033d55e75ab215e45f7 193 Pfam PF02559 CarD-like/TRCF domain 3 110 3.4E-14 T 10-03-2017 IPR003711 CarD-like/TRCF domain CpPa04_RS08975 508242971e4cc033d55e75ab215e45f7 193 SUPERFAMILY SSF141259 1 67 1.24E-15 T 10-03-2017 IPR003711 CarD-like/TRCF domain CpPa04_RS08975 508242971e4cc033d55e75ab215e45f7 193 SMART SM01058 2 112 2.4E-31 T 10-03-2017 IPR003711 CarD-like/TRCF domain CpPa04_RS05955 9d85b6bc40419711a8a82645f304218c 111 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 6 85 1.1E-15 T 10-03-2017 IPR003849 Preprotein translocase YajC CpPa04_RS05955 9d85b6bc40419711a8a82645f304218c 111 Pfam PF02699 Preprotein translocase subunit 8 82 5.2E-16 T 10-03-2017 IPR003849 Preprotein translocase YajC CpPa04_RS05955 9d85b6bc40419711a8a82645f304218c 111 SMART SM01323 3 85 6.8E-21 T 10-03-2017 IPR003849 Preprotein translocase YajC CpPa04_RS06125 88a40f78bcfd91c2fcfa3f63e2fffd4d 153 TIGRFAM TIGR00576 dut: dUTP diphosphatase 13 151 6.3E-52 T 10-03-2017 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|Reactome: R-HSA-500753 CpPa04_RS06125 88a40f78bcfd91c2fcfa3f63e2fffd4d 153 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 10 152 30.704 T 10-03-2017 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|Reactome: R-HSA-500753 CpPa04_RS06125 88a40f78bcfd91c2fcfa3f63e2fffd4d 153 Pfam PF00692 dUTPase 21 151 4.4E-32 T 10-03-2017 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 CpPa04_RS06125 88a40f78bcfd91c2fcfa3f63e2fffd4d 153 SUPERFAMILY SSF51283 13 152 6.41E-47 T 10-03-2017 IPR029054 dUTPase-like CpPa04_RS06125 88a40f78bcfd91c2fcfa3f63e2fffd4d 153 Gene3D G3DSA:2.70.40.10 10 152 3.4E-55 T 10-03-2017 IPR029054 dUTPase-like CpPa04_RS05005 be29e55b8296aaf540b79f94f7db2392 292 SUPERFAMILY SSF53807 44 289 6.67E-43 T 10-03-2017 CpPa04_RS05005 be29e55b8296aaf540b79f94f7db2392 292 Gene3D G3DSA:3.40.50.1980 43 145 3.9E-28 T 10-03-2017 CpPa04_RS05005 be29e55b8296aaf540b79f94f7db2392 292 Gene3D G3DSA:3.40.50.1980 146 289 4.4E-10 T 10-03-2017 CpPa04_RS05005 be29e55b8296aaf540b79f94f7db2392 292 Pfam PF01497 Periplasmic binding protein 49 249 8.1E-24 T 10-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CpPa04_RS01585 25a36a3f2040d7ac11cf1a4d459d32ac 143 Gene3D G3DSA:3.30.1550.10 4 73 1.0E-37 T 10-03-2017 IPR020784 Ribosomal protein L11, N-terminal CpPa04_RS01585 25a36a3f2040d7ac11cf1a4d459d32ac 143 SMART SM00649 11 142 6.5E-84 T 10-03-2017 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CpPa04_RS01585 25a36a3f2040d7ac11cf1a4d459d32ac 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 7 143 31.684 T 10-03-2017 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CpPa04_RS01585 25a36a3f2040d7ac11cf1a4d459d32ac 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 38 70 1.0E-12 T 10-03-2017 CpPa04_RS01585 25a36a3f2040d7ac11cf1a4d459d32ac 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 11 68 1.6E-28 T 10-03-2017 IPR020784 Ribosomal protein L11, N-terminal CpPa04_RS01585 25a36a3f2040d7ac11cf1a4d459d32ac 143 SUPERFAMILY SSF46906 69 142 1.18E-26 T 10-03-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CpPa04_RS01585 25a36a3f2040d7ac11cf1a4d459d32ac 143 SUPERFAMILY SSF54747 4 74 3.01E-29 T 10-03-2017 IPR020784 Ribosomal protein L11, N-terminal CpPa04_RS01585 25a36a3f2040d7ac11cf1a4d459d32ac 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 128 143 - T 10-03-2017 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01585 25a36a3f2040d7ac11cf1a4d459d32ac 143 Gene3D G3DSA:1.10.10.250 74 142 1.2E-31 T 10-03-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CpPa04_RS01585 25a36a3f2040d7ac11cf1a4d459d32ac 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 73 141 8.3E-26 T 10-03-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CpPa04_RS01585 25a36a3f2040d7ac11cf1a4d459d32ac 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 5 143 1.5E-63 T 10-03-2017 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS07125 af88717475f4999d52138f7be44f8c98 143 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 135 2.0E-64 T 10-03-2017 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CpPa04_RS07125 af88717475f4999d52138f7be44f8c98 143 Pfam PF02381 MraZ protein, putative antitoxin-like 74 133 4.4E-19 T 10-03-2017 IPR020603 MraZ domain CpPa04_RS07125 af88717475f4999d52138f7be44f8c98 143 Pfam PF02381 MraZ protein, putative antitoxin-like 1 70 3.0E-19 T 10-03-2017 IPR020603 MraZ domain CpPa04_RS07125 af88717475f4999d52138f7be44f8c98 143 SUPERFAMILY SSF89447 1 133 8.02E-44 T 10-03-2017 CpPa04_RS07125 af88717475f4999d52138f7be44f8c98 143 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 143 50.193 T 10-03-2017 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CpPa04_RS07125 af88717475f4999d52138f7be44f8c98 143 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 132 5.2E-33 T 10-03-2017 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CpPa04_RS02515 e384c1a90de77a4be67385cefe0b063f 155 Pfam PF02698 DUF218 domain 11 140 1.0E-23 T 10-03-2017 IPR003848 Domain of unknown function DUF218 CpPa04_RS02515 e384c1a90de77a4be67385cefe0b063f 155 Gene3D G3DSA:3.40.50.620 6 128 2.6E-18 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS09365 7384355ddc98ffe1ef991b69add9ab08 496 SUPERFAMILY SSF63829 256 478 4.9E-5 T 10-03-2017 CpPa04_RS09365 7384355ddc98ffe1ef991b69add9ab08 496 Gene3D G3DSA:2.120.10.30 412 491 9.5E-4 T 10-03-2017 IPR011042 Six-bladed beta-propeller, TolB-like CpPa04_RS09365 7384355ddc98ffe1ef991b69add9ab08 496 Gene3D G3DSA:1.20.1550.10 13 85 6.4E-4 T 10-03-2017 IPR023380 Disulphide bond formation protein DsbB-like domain CpPa04_RS09365 7384355ddc98ffe1ef991b69add9ab08 496 Pfam PF02600 Disulfide bond formation protein DsbB 11 90 4.9E-8 T 10-03-2017 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 CpPa04_RS09365 7384355ddc98ffe1ef991b69add9ab08 496 SUPERFAMILY SSF158442 14 125 5.49E-11 T 10-03-2017 CpPa04_RS04950 38abd79d00fb5296fcba77aac4be4bc8 501 SUPERFAMILY SSF103473 19 216 1.92E-26 T 10-03-2017 IPR020846 Major facilitator superfamily domain CpPa04_RS04950 38abd79d00fb5296fcba77aac4be4bc8 501 SUPERFAMILY SSF103473 288 492 1.92E-26 T 10-03-2017 IPR020846 Major facilitator superfamily domain CpPa04_RS04950 38abd79d00fb5296fcba77aac4be4bc8 501 Pfam PF00854 POT family 96 467 1.8E-37 T 10-03-2017 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 CpPa04_RS04950 38abd79d00fb5296fcba77aac4be4bc8 501 Gene3D G3DSA:1.20.1250.20 37 220 7.0E-16 T 10-03-2017 CpPa04_RS04950 38abd79d00fb5296fcba77aac4be4bc8 501 Gene3D G3DSA:1.20.1250.20 341 491 1.6E-4 T 10-03-2017 CpPa04_RS04950 38abd79d00fb5296fcba77aac4be4bc8 501 Gene3D G3DSA:1.20.1250.20 262 294 1.6E-4 T 10-03-2017 CpPa04_RS04950 38abd79d00fb5296fcba77aac4be4bc8 501 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 18 498 1.1E-97 T 10-03-2017 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CpPa04_RS10655 92efdc084304487cb82a99e7b4785b3f 222 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 56 214 1.0E-24 T 10-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS10655 92efdc084304487cb82a99e7b4785b3f 222 SUPERFAMILY SSF88946 38 136 3.61E-25 T 10-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS10655 92efdc084304487cb82a99e7b4785b3f 222 Gene3D G3DSA:1.10.1740.10 39 138 2.5E-27 T 10-03-2017 CpPa04_RS10655 92efdc084304487cb82a99e7b4785b3f 222 Gene3D G3DSA:1.10.10.10 154 217 2.2E-15 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS10655 92efdc084304487cb82a99e7b4785b3f 222 Pfam PF08281 Sigma-70, region 4 159 211 3.8E-10 T 10-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS10655 92efdc084304487cb82a99e7b4785b3f 222 SUPERFAMILY SSF88659 152 216 2.24E-11 T 10-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS10655 92efdc084304487cb82a99e7b4785b3f 222 Pfam PF04542 Sigma-70 region 2 62 122 4.4E-14 T 10-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS07525 78b6a1dc1aec9b4db71abc6f8e89293d 551 Pfam PF01928 CYTH domain 7 186 5.5E-14 T 10-03-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 CpPa04_RS07525 78b6a1dc1aec9b4db71abc6f8e89293d 551 SMART SM00880 234 512 6.4E-49 T 10-03-2017 IPR007899 CHAD domain CpPa04_RS07525 78b6a1dc1aec9b4db71abc6f8e89293d 551 SUPERFAMILY SSF55154 5 222 3.49E-41 T 10-03-2017 IPR033469 CYTH-like domain Reactome: R-HSA-196819 CpPa04_RS07525 78b6a1dc1aec9b4db71abc6f8e89293d 551 Gene3D G3DSA:2.40.320.10 4 220 3.2E-52 T 10-03-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 CpPa04_RS07525 78b6a1dc1aec9b4db71abc6f8e89293d 551 Pfam PF05235 CHAD domain 235 479 1.2E-51 T 10-03-2017 IPR007899 CHAD domain CpPa04_RS07525 78b6a1dc1aec9b4db71abc6f8e89293d 551 SMART SM01118 6 205 2.7E-14 T 10-03-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 CpPa04_RS00165 ea7d060613908317355a419a4cd71a7a 506 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 144 156 - T 10-03-2017 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 CpPa04_RS00165 ea7d060613908317355a419a4cd71a7a 506 Gene3D G3DSA:1.10.510.10 91 272 1.7E-51 T 10-03-2017 CpPa04_RS00165 ea7d060613908317355a419a4cd71a7a 506 SMART SM00220 20 279 2.9E-58 T 10-03-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CpPa04_RS00165 ea7d060613908317355a419a4cd71a7a 506 Pfam PF00069 Protein kinase domain 24 268 1.0E-49 T 10-03-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CpPa04_RS00165 ea7d060613908317355a419a4cd71a7a 506 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 26 49 - T 10-03-2017 IPR017441 Protein kinase, ATP binding site GO:0005524 CpPa04_RS00165 ea7d060613908317355a419a4cd71a7a 506 SUPERFAMILY SSF56112 16 285 7.55E-74 T 10-03-2017 IPR011009 Protein kinase-like domain CpPa04_RS00165 ea7d060613908317355a419a4cd71a7a 506 Gene3D G3DSA:3.30.200.20 14 90 1.8E-20 T 10-03-2017 CpPa04_RS03855 de3c6b37786b6713026bbfa68bb1be7b 128 Gene3D G3DSA:3.90.79.10 5 112 2.4E-19 T 10-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CpPa04_RS03855 de3c6b37786b6713026bbfa68bb1be7b 128 SUPERFAMILY SSF55811 3 126 1.9E-20 T 10-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CpPa04_RS03855 de3c6b37786b6713026bbfa68bb1be7b 128 Pfam PF00293 NUDIX domain 7 109 2.0E-11 T 10-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 CpPa04_RS10705 351d3a1b4c4afbe7e5a3fe8120d438ab 118 SUPERFAMILY SSF54211 2 116 6.07E-20 T 10-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CpPa04_RS10705 351d3a1b4c4afbe7e5a3fe8120d438ab 118 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 8 115 2.0E-8 T 10-03-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CpPa04_RS10705 351d3a1b4c4afbe7e5a3fe8120d438ab 118 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 2 118 14.42 T 10-03-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CpPa04_RS10705 351d3a1b4c4afbe7e5a3fe8120d438ab 118 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 109 6.8E-15 T 10-03-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CpPa04_RS10705 351d3a1b4c4afbe7e5a3fe8120d438ab 118 Gene3D G3DSA:3.30.230.10 2 115 1.1E-27 T 10-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CpPa04_RS10705 351d3a1b4c4afbe7e5a3fe8120d438ab 118 Pfam PF00825 Ribonuclease P 2 115 1.1E-25 T 10-03-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CpPa04_RS08315 572e73e0dfc24b5ed90d0ff579fb76bd 159 Pfam PF00578 AhpC/TSA family 10 135 6.2E-37 T 10-03-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CpPa04_RS08315 572e73e0dfc24b5ed90d0ff579fb76bd 159 Gene3D G3DSA:3.40.30.10 3 156 3.2E-46 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS08315 572e73e0dfc24b5ed90d0ff579fb76bd 159 SUPERFAMILY SSF52833 7 155 7.99E-46 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS08315 572e73e0dfc24b5ed90d0ff579fb76bd 159 PIRSF PIRSF000239 2 159 1.6E-22 T 10-03-2017 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CpPa04_RS02805 f8c17e7da88aa82927d1bd2cbdc0789f 69 Pfam PF08667 BetR domain 9 56 1.3E-7 T 10-03-2017 IPR013975 Transcription regulator BetR, N-terminal CpPa04_RS02805 f8c17e7da88aa82927d1bd2cbdc0789f 69 SUPERFAMILY SSF47413 8 52 1.13E-5 T 10-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CpPa04_RS02805 f8c17e7da88aa82927d1bd2cbdc0789f 69 Gene3D G3DSA:1.10.260.40 8 57 6.5E-6 T 10-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CpPa04_RS09985 06b9552bb5f3bdeda7191ee2c329a4dc 365 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 61 344 5.8E-47 T 10-03-2017 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CpPa04_RS09985 06b9552bb5f3bdeda7191ee2c329a4dc 365 SUPERFAMILY SSF51695 58 350 9.42E-60 T 10-03-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CpPa04_RS09985 06b9552bb5f3bdeda7191ee2c329a4dc 365 Gene3D G3DSA:3.20.20.190 54 361 8.2E-80 T 10-03-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CpPa04_RS09930 9e1bb1f310ec50510bccf1eed40edf69 308 SMART SM01110 54 303 8.2E-61 T 10-03-2017 IPR000675 Cutinase/acetylxylan esterase GO:0008152|GO:0016787 CpPa04_RS09930 9e1bb1f310ec50510bccf1eed40edf69 308 Pfam PF01083 Cutinase 56 262 9.9E-14 T 10-03-2017 IPR000675 Cutinase/acetylxylan esterase GO:0008152|GO:0016787 CpPa04_RS09930 9e1bb1f310ec50510bccf1eed40edf69 308 SUPERFAMILY SSF53474 56 263 2.77E-26 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS09930 9e1bb1f310ec50510bccf1eed40edf69 308 Gene3D G3DSA:3.40.50.1820 239 305 5.5E-45 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS09930 9e1bb1f310ec50510bccf1eed40edf69 308 Gene3D G3DSA:3.40.50.1820 48 201 5.5E-45 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS00655 754cf4737530c490644ff9b183f029bb 757 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 274 737 7.0E-68 T 10-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS00655 754cf4737530c490644ff9b183f029bb 757 SUPERFAMILY SSF81442 269 755 1.57E-74 T 10-03-2017 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS01405 8399032636c67d274e9e7308dae81d8e 315 Pfam PF00490 Delta-aminolevulinic acid dehydratase 1 311 7.3E-138 T 10-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CpPa04_RS01405 8399032636c67d274e9e7308dae81d8e 315 PIRSF PIRSF001415 1 315 4.7E-141 T 10-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CpPa04_RS01405 8399032636c67d274e9e7308dae81d8e 315 Gene3D G3DSA:3.20.20.70 1 314 5.1E-140 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS01405 8399032636c67d274e9e7308dae81d8e 315 SMART SM01004 1 313 5.2E-205 T 10-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CpPa04_RS01405 8399032636c67d274e9e7308dae81d8e 315 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 232 244 - T 10-03-2017 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CpPa04_RS01405 8399032636c67d274e9e7308dae81d8e 315 SUPERFAMILY SSF51569 1 314 2.49E-128 T 10-03-2017 CpPa04_RS01405 8399032636c67d274e9e7308dae81d8e 315 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 287 306 2.4E-59 T 10-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CpPa04_RS01405 8399032636c67d274e9e7308dae81d8e 315 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 143 162 2.4E-59 T 10-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CpPa04_RS01405 8399032636c67d274e9e7308dae81d8e 315 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 257 272 2.4E-59 T 10-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CpPa04_RS01405 8399032636c67d274e9e7308dae81d8e 315 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 232 248 2.4E-59 T 10-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CpPa04_RS01405 8399032636c67d274e9e7308dae81d8e 315 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 108 122 2.4E-59 T 10-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CpPa04_RS01405 8399032636c67d274e9e7308dae81d8e 315 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 181 200 2.4E-59 T 10-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CpPa04_RS10415 cafa9cf35b9e3c6d7785f2c74bb507bb 227 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS10415 cafa9cf35b9e3c6d7785f2c74bb507bb 227 Gene3D G3DSA:3.40.50.300 3 223 7.3E-65 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS10415 cafa9cf35b9e3c6d7785f2c74bb507bb 227 SUPERFAMILY SSF52540 5 224 9.51E-62 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS10415 cafa9cf35b9e3c6d7785f2c74bb507bb 227 SMART SM00382 33 224 2.4E-12 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS10415 cafa9cf35b9e3c6d7785f2c74bb507bb 227 Pfam PF00005 ABC transporter 24 176 3.9E-35 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS08580 544f3e5e10f27ed3d1f02215988b5d5c 841 Pfam PF12704 MacB-like periplasmic core domain 480 650 1.8E-6 T 10-03-2017 IPR025857 MacB-like periplasmic core domain CpPa04_RS08580 544f3e5e10f27ed3d1f02215988b5d5c 841 Pfam PF12704 MacB-like periplasmic core domain 17 179 3.7E-9 T 10-03-2017 IPR025857 MacB-like periplasmic core domain CpPa04_RS08580 544f3e5e10f27ed3d1f02215988b5d5c 841 Pfam PF02687 FtsX-like permease family 257 372 2.4E-21 T 10-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 CpPa04_RS08580 544f3e5e10f27ed3d1f02215988b5d5c 841 Pfam PF02687 FtsX-like permease family 719 835 7.8E-21 T 10-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 CpPa04_RS06285 95762a3d8e51ad785d9107c03bceca35 88 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 10-03-2017 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CpPa04_RS06285 95762a3d8e51ad785d9107c03bceca35 88 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 5.3E-26 T 10-03-2017 IPR000032 Phosphocarrier protein HPr-like CpPa04_RS06285 95762a3d8e51ad785d9107c03bceca35 88 Gene3D G3DSA:3.30.1340.10 1 86 1.8E-20 T 10-03-2017 IPR000032 Phosphocarrier protein HPr-like CpPa04_RS06285 95762a3d8e51ad785d9107c03bceca35 88 Pfam PF00381 PTS HPr component phosphorylation site 3 82 2.7E-21 T 10-03-2017 IPR000032 Phosphocarrier protein HPr-like CpPa04_RS06285 95762a3d8e51ad785d9107c03bceca35 88 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.2E-10 T 10-03-2017 IPR000032 Phosphocarrier protein HPr-like CpPa04_RS06285 95762a3d8e51ad785d9107c03bceca35 88 PRINTS PR00107 Phosphocarrier protein signature 56 73 1.2E-10 T 10-03-2017 IPR000032 Phosphocarrier protein HPr-like CpPa04_RS06285 95762a3d8e51ad785d9107c03bceca35 88 PRINTS PR00107 Phosphocarrier protein signature 41 56 1.2E-10 T 10-03-2017 IPR000032 Phosphocarrier protein HPr-like CpPa04_RS06285 95762a3d8e51ad785d9107c03bceca35 88 SUPERFAMILY SSF55594 1 86 3.01E-18 T 10-03-2017 IPR000032 Phosphocarrier protein HPr-like CpPa04_RS00930 4719674d35cec9833b0b138e602427be 350 Pfam PF00005 ABC transporter 19 150 2.2E-29 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS00930 4719674d35cec9833b0b138e602427be 350 SMART SM00382 28 200 7.6E-16 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS00930 4719674d35cec9833b0b138e602427be 350 Gene3D G3DSA:3.40.50.300 5 215 8.6E-62 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00930 4719674d35cec9833b0b138e602427be 350 Pfam PF08402 TOBE domain 291 348 9.8E-5 T 10-03-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CpPa04_RS00930 4719674d35cec9833b0b138e602427be 350 SUPERFAMILY SSF52540 4 225 3.88E-58 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04205 6dd75efdb1b91b770f7e25eaad8c9432 209 SUPERFAMILY SSF100950 38 209 1.05E-34 T 10-03-2017 CpPa04_RS04205 6dd75efdb1b91b770f7e25eaad8c9432 209 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 64 208 1.1E-17 T 10-03-2017 IPR003741 LUD domain CpPa04_RS04205 6dd75efdb1b91b770f7e25eaad8c9432 209 Gene3D G3DSA:3.40.50.10420 39 209 2.3E-49 T 10-03-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CpPa04_RS08285 6f7125d4ffb50c3c7d4e6108fab96743 396 Pfam PF03734 L,D-transpeptidase catalytic domain 246 365 2.1E-20 T 10-03-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CpPa04_RS08285 6f7125d4ffb50c3c7d4e6108fab96743 396 Gene3D G3DSA:2.40.440.10 245 366 5.7E-21 T 10-03-2017 CpPa04_RS08285 6f7125d4ffb50c3c7d4e6108fab96743 396 SUPERFAMILY SSF141523 240 365 3.66E-30 T 10-03-2017 CpPa04_RS01340 ad0207a3081cb71c737eafde456e3930 318 SUPERFAMILY SSF53067 128 306 6.47E-35 T 10-03-2017 CpPa04_RS01340 ad0207a3081cb71c737eafde456e3930 318 SUPERFAMILY SSF53067 2 125 5.11E-27 T 10-03-2017 CpPa04_RS01340 ad0207a3081cb71c737eafde456e3930 318 Pfam PF02541 Ppx/GppA phosphatase family 19 304 1.6E-74 T 10-03-2017 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 CpPa04_RS01340 ad0207a3081cb71c737eafde456e3930 318 Gene3D G3DSA:3.30.420.40 2 122 2.2E-30 T 10-03-2017 CpPa04_RS01340 ad0207a3081cb71c737eafde456e3930 318 Gene3D G3DSA:3.30.420.150 125 306 7.5E-47 T 10-03-2017 CpPa04_RS02965 77f841d6a5e8f2ce61ea656c5d870bdb 330 Gene3D G3DSA:3.40.50.1980 170 326 1.0E-27 T 10-03-2017 CpPa04_RS02965 77f841d6a5e8f2ce61ea656c5d870bdb 330 SUPERFAMILY SSF53807 38 314 6.67E-50 T 10-03-2017 CpPa04_RS02965 77f841d6a5e8f2ce61ea656c5d870bdb 330 Pfam PF01497 Periplasmic binding protein 59 304 1.4E-43 T 10-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CpPa04_RS02965 77f841d6a5e8f2ce61ea656c5d870bdb 330 Gene3D G3DSA:3.40.50.1980 39 169 1.8E-24 T 10-03-2017 CpPa04_RS06715 a484dbfb3b30ba357aab9eb1940f523a 677 SUPERFAMILY SSF55804 535 656 1.57E-28 T 10-03-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CpPa04_RS06715 a484dbfb3b30ba357aab9eb1940f523a 677 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 17 98 1.4E-28 T 10-03-2017 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 CpPa04_RS06715 a484dbfb3b30ba357aab9eb1940f523a 677 Gene3D G3DSA:3.40.930.10 525 661 3.0E-35 T 10-03-2017 IPR002178 PTS EIIA type-2 domain CpPa04_RS06715 a484dbfb3b30ba357aab9eb1940f523a 677 SUPERFAMILY SSF52794 15 113 3.66E-32 T 10-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CpPa04_RS06715 a484dbfb3b30ba357aab9eb1940f523a 677 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 17 105 2.7E-15 T 10-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CpPa04_RS06715 a484dbfb3b30ba357aab9eb1940f523a 677 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 527 656 1.1E-28 T 10-03-2017 IPR002178 PTS EIIA type-2 domain CpPa04_RS06715 a484dbfb3b30ba357aab9eb1940f523a 677 Gene3D G3DSA:3.40.50.2300 13 113 3.6E-37 T 10-03-2017 CpPa04_RS06715 a484dbfb3b30ba357aab9eb1940f523a 677 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 147 479 8.6E-85 T 10-03-2017 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 CpPa04_RS05685 c978b83007cf19b3e18c3d03d2576e90 224 Gene3D G3DSA:3.20.20.70 6 222 1.7E-89 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS05685 c978b83007cf19b3e18c3d03d2576e90 224 PIRSF PIRSF001461 4 224 4.7E-88 T 10-03-2017 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CpPa04_RS05685 c978b83007cf19b3e18c3d03d2576e90 224 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 137 159 - T 10-03-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CpPa04_RS05685 c978b83007cf19b3e18c3d03d2576e90 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 10 217 4.9E-81 T 10-03-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CpPa04_RS05685 c978b83007cf19b3e18c3d03d2576e90 224 SUPERFAMILY SSF51366 8 219 4.33E-66 T 10-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CpPa04_RS05685 c978b83007cf19b3e18c3d03d2576e90 224 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 35 49 - T 10-03-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CpPa04_RS05685 c978b83007cf19b3e18c3d03d2576e90 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 10 204 1.2E-75 T 10-03-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CpPa04_RS08565 b216a76cf25651579526a0fe3ca4b396 545 Gene3D G3DSA:3.40.120.10 224 308 9.2E-43 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS08565 b216a76cf25651579526a0fe3ca4b396 545 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 39 179 2.0E-36 T 10-03-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS08565 b216a76cf25651579526a0fe3ca4b396 545 SUPERFAMILY SSF53738 305 447 1.49E-33 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS08565 b216a76cf25651579526a0fe3ca4b396 545 Gene3D G3DSA:3.30.310.50 466 544 2.0E-27 T 10-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS08565 b216a76cf25651579526a0fe3ca4b396 545 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 10-03-2017 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS08565 b216a76cf25651579526a0fe3ca4b396 545 SUPERFAMILY SSF53738 24 234 1.63E-47 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS08565 b216a76cf25651579526a0fe3ca4b396 545 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 491 537 4.9E-7 T 10-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS08565 b216a76cf25651579526a0fe3ca4b396 545 Gene3D G3DSA:3.40.120.10 29 223 4.3E-56 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS08565 b216a76cf25651579526a0fe3ca4b396 545 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 209 314 8.8E-11 T 10-03-2017 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS08565 b216a76cf25651579526a0fe3ca4b396 545 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 2 543 1.0E-284 T 10-03-2017 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 CpPa04_RS08565 b216a76cf25651579526a0fe3ca4b396 545 Gene3D G3DSA:3.40.120.10 309 444 1.4E-34 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS08565 b216a76cf25651579526a0fe3ca4b396 545 SUPERFAMILY SSF55957 432 543 1.41E-19 T 10-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS08565 b216a76cf25651579526a0fe3ca4b396 545 SUPERFAMILY SSF53738 208 315 2.12E-5 T 10-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS08565 b216a76cf25651579526a0fe3ca4b396 545 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 440 7.8E-29 T 10-03-2017 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CpPa04_RS10150 0741f486fd489b6d900a53518d50dc83 475 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 10-03-2017 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-3229133|Reactome: R-HSA-70153 CpPa04_RS10150 0741f486fd489b6d900a53518d50dc83 475 PIRSF PIRSF002808 6 465 1.0E-144 T 10-03-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CpPa04_RS10150 0741f486fd489b6d900a53518d50dc83 475 Gene3D G3DSA:1.20.1250.20 250 463 3.5E-30 T 10-03-2017 CpPa04_RS10150 0741f486fd489b6d900a53518d50dc83 475 SUPERFAMILY SSF103473 20 462 1.26E-64 T 10-03-2017 IPR020846 Major facilitator superfamily domain CpPa04_RS10150 0741f486fd489b6d900a53518d50dc83 475 Pfam PF07690 Major Facilitator Superfamily 35 395 1.1E-38 T 10-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CpPa04_RS10150 0741f486fd489b6d900a53518d50dc83 475 Gene3D G3DSA:1.20.1250.20 29 227 7.5E-39 T 10-03-2017 CpPa04_RS08800 f54080c97deb50fb4d1c915cdbfc334d 766 Pfam PF00586 AIR synthase related protein, N-terminal domain 459 577 2.5E-21 T 10-03-2017 IPR016188 PurM-like, N-terminal domain CpPa04_RS08800 f54080c97deb50fb4d1c915cdbfc334d 766 Pfam PF00586 AIR synthase related protein, N-terminal domain 103 204 2.2E-23 T 10-03-2017 IPR016188 PurM-like, N-terminal domain CpPa04_RS08800 f54080c97deb50fb4d1c915cdbfc334d 766 Pfam PF02769 AIR synthase related protein, C-terminal domain 219 372 3.1E-33 T 10-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain CpPa04_RS08800 f54080c97deb50fb4d1c915cdbfc334d 766 Pfam PF02769 AIR synthase related protein, C-terminal domain 597 724 1.1E-12 T 10-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain CpPa04_RS08800 f54080c97deb50fb4d1c915cdbfc334d 766 PIRSF PIRSF001587 8 758 2.2E-274 T 10-03-2017 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 CpPa04_RS08800 f54080c97deb50fb4d1c915cdbfc334d 766 Gene3D G3DSA:3.90.650.10 640 685 3.0E-4 T 10-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain CpPa04_RS08800 f54080c97deb50fb4d1c915cdbfc334d 766 Gene3D G3DSA:3.90.650.10 266 368 1.1E-4 T 10-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain CpPa04_RS08800 f54080c97deb50fb4d1c915cdbfc334d 766 SUPERFAMILY SSF55326 415 583 2.22E-51 T 10-03-2017 CpPa04_RS08800 f54080c97deb50fb4d1c915cdbfc334d 766 SUPERFAMILY SSF56042 596 755 3.31E-30 T 10-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain CpPa04_RS08800 f54080c97deb50fb4d1c915cdbfc334d 766 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 765 285.391 T 10-03-2017 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 CpPa04_RS08800 f54080c97deb50fb4d1c915cdbfc334d 766 Gene3D G3DSA:3.30.1330.10 433 581 2.2E-51 T 10-03-2017 IPR016188 PurM-like, N-terminal domain CpPa04_RS08800 f54080c97deb50fb4d1c915cdbfc334d 766 Gene3D G3DSA:3.30.1330.10 61 209 4.3E-49 T 10-03-2017 IPR016188 PurM-like, N-terminal domain CpPa04_RS08800 f54080c97deb50fb4d1c915cdbfc334d 766 SUPERFAMILY SSF56042 218 444 1.79E-49 T 10-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain CpPa04_RS08800 f54080c97deb50fb4d1c915cdbfc334d 766 SUPERFAMILY SSF55326 46 209 4.34E-47 T 10-03-2017 CpPa04_RS08800 f54080c97deb50fb4d1c915cdbfc334d 766 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 29 754 6.2E-255 T 10-03-2017 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 CpPa04_RS08170 0a7432597b04f514dd1c628915e132aa 142 Gene3D G3DSA:3.10.129.10 3 137 2.8E-33 T 10-03-2017 IPR029069 HotDog domain CpPa04_RS08170 0a7432597b04f514dd1c628915e132aa 142 SUPERFAMILY SSF54637 7 136 5.7E-27 T 10-03-2017 IPR029069 HotDog domain CpPa04_RS08170 0a7432597b04f514dd1c628915e132aa 142 Pfam PF13279 Thioesterase-like superfamily 16 126 5.6E-16 T 10-03-2017 CpPa04_RS02755 d7cf827f8d0dbbd0024e61a73a65cbbe 219 SUPERFAMILY SSF55811 78 216 2.57E-26 T 10-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CpPa04_RS02755 d7cf827f8d0dbbd0024e61a73a65cbbe 219 Pfam PF00293 NUDIX domain 88 194 1.2E-12 T 10-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 CpPa04_RS02755 d7cf827f8d0dbbd0024e61a73a65cbbe 219 ProSitePatterns PS00893 Nudix box signature. 119 140 - T 10-03-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CpPa04_RS02755 d7cf827f8d0dbbd0024e61a73a65cbbe 219 Gene3D G3DSA:3.90.79.10 66 216 1.3E-29 T 10-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CpPa04_RS08615 3d2d1b2c13d7b3ec90abadfe35f0dba7 190 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 9 181 4.1E-49 T 10-03-2017 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CpPa04_RS08615 3d2d1b2c13d7b3ec90abadfe35f0dba7 190 Gene3D G3DSA:1.20.1200.10 17 187 7.9E-55 T 10-03-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CpPa04_RS08615 3d2d1b2c13d7b3ec90abadfe35f0dba7 190 Pfam PF01923 Cobalamin adenosyltransferase 8 175 2.0E-54 T 10-03-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CpPa04_RS08615 3d2d1b2c13d7b3ec90abadfe35f0dba7 190 SUPERFAMILY SSF89028 6 185 2.75E-55 T 10-03-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CpPa04_RS08615 3d2d1b2c13d7b3ec90abadfe35f0dba7 190 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 14 184 9.0E-56 T 10-03-2017 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CpPa04_RS07995 f9a08e7d4187db940424c95c6d7a0b0a 218 Gene3D G3DSA:3.40.50.620 8 203 1.5E-67 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS07995 f9a08e7d4187db940424c95c6d7a0b0a 218 Pfam PF01467 Cytidylyltransferase-like 12 175 1.1E-30 T 10-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CpPa04_RS07995 f9a08e7d4187db940424c95c6d7a0b0a 218 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 8 201 29.841 T 10-03-2017 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 CpPa04_RS07995 f9a08e7d4187db940424c95c6d7a0b0a 218 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 12 200 1.6E-56 T 10-03-2017 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 CpPa04_RS07995 f9a08e7d4187db940424c95c6d7a0b0a 218 SUPERFAMILY SSF52374 8 200 9.7E-54 T 10-03-2017 CpPa04_RS07995 f9a08e7d4187db940424c95c6d7a0b0a 218 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 10 74 1.4E-11 T 10-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CpPa04_RS06775 75cc6503886d80821c5d61743ed408f0 105 Gene3D G3DSA:3.30.70.100 16 102 1.0E-23 T 10-03-2017 CpPa04_RS06775 75cc6503886d80821c5d61743ed408f0 105 ProSitePatterns PS00150 Acylphosphatase signature 1. 22 32 - T 10-03-2017 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CpPa04_RS06775 75cc6503886d80821c5d61743ed408f0 105 Pfam PF00708 Acylphosphatase 16 102 1.0E-18 T 10-03-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CpPa04_RS06775 75cc6503886d80821c5d61743ed408f0 105 SUPERFAMILY SSF54975 14 102 1.33E-21 T 10-03-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CpPa04_RS04990 53cb21529e36d93ce034aaf3bab44b4a 279 SUPERFAMILY SSF53335 48 241 1.53E-25 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS04990 53cb21529e36d93ce034aaf3bab44b4a 279 Gene3D G3DSA:3.40.50.150 45 183 1.1E-23 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS04990 53cb21529e36d93ce034aaf3bab44b4a 279 Pfam PF08241 Methyltransferase domain 79 167 9.5E-15 T 10-03-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CpPa04_RS03155 f08e9293b9d2590f0926017ece57a74b 328 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 22 234 3.3E-15 T 10-03-2017 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 CpPa04_RS03155 f08e9293b9d2590f0926017ece57a74b 328 Gene3D G3DSA:3.30.1780.10 5 141 2.3E-23 T 10-03-2017 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 CpPa04_RS03155 f08e9293b9d2590f0926017ece57a74b 328 Gene3D G3DSA:3.40.50.720 142 298 4.7E-12 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS03155 f08e9293b9d2590f0926017ece57a74b 328 SUPERFAMILY SSF51735 6 328 2.55E-34 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS07195 ec42ebdc6f97449e4f6db24d46c318ec 317 Gene3D G3DSA:3.30.420.40 140 287 5.4E-46 T 10-03-2017 CpPa04_RS07195 ec42ebdc6f97449e4f6db24d46c318ec 317 SUPERFAMILY SSF53067 9 316 7.11E-63 T 10-03-2017 CpPa04_RS07195 ec42ebdc6f97449e4f6db24d46c318ec 317 Gene3D G3DSA:3.30.420.40 6 139 2.3E-39 T 10-03-2017 CpPa04_RS07195 ec42ebdc6f97449e4f6db24d46c318ec 317 Pfam PF00480 ROK family 10 315 3.6E-72 T 10-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CpPa04_RS03030 4519abdad6382441c46849d13d7165ab 207 Pfam PF11574 Protein of unknown function (DUF3235) 116 203 1.0E-31 T 10-03-2017 IPR021630 Domain of unknown function DUF3235 CpPa04_RS03030 4519abdad6382441c46849d13d7165ab 207 Gene3D G3DSA:1.10.1200.100 116 206 3.5E-39 T 10-03-2017 IPR021630 Domain of unknown function DUF3235 CpPa04_RS03030 4519abdad6382441c46849d13d7165ab 207 Gene3D G3DSA:1.10.530.10 15 115 1.6E-44 T 10-03-2017 CpPa04_RS03030 4519abdad6382441c46849d13d7165ab 207 Pfam PF06737 Transglycosylase-like domain 36 111 7.9E-36 T 10-03-2017 IPR010618 Transglycosylase-like CpPa04_RS03030 4519abdad6382441c46849d13d7165ab 207 SUPERFAMILY SSF53955 36 117 8.21E-34 T 10-03-2017 IPR023346 Lysozyme-like domain CpPa04_RS03220 e6acdbde1dd29d526a40e7b2166180df 252 Gene3D G3DSA:3.30.540.10 38 144 3.0E-27 T 10-03-2017 CpPa04_RS03220 e6acdbde1dd29d526a40e7b2166180df 252 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 79 92 - T 10-03-2017 IPR020583 Inositol monophosphatase, metal-binding site CpPa04_RS03220 e6acdbde1dd29d526a40e7b2166180df 252 PRINTS PR00377 Inositol monophosphatase superfamily signature 188 212 3.2E-5 T 10-03-2017 IPR000760 Inositol monophosphatase GO:0046854 CpPa04_RS03220 e6acdbde1dd29d526a40e7b2166180df 252 PRINTS PR00377 Inositol monophosphatase superfamily signature 57 73 3.2E-5 T 10-03-2017 IPR000760 Inositol monophosphatase GO:0046854 CpPa04_RS03220 e6acdbde1dd29d526a40e7b2166180df 252 PRINTS PR00377 Inositol monophosphatase superfamily signature 79 95 3.2E-5 T 10-03-2017 IPR000760 Inositol monophosphatase GO:0046854 CpPa04_RS03220 e6acdbde1dd29d526a40e7b2166180df 252 Pfam PF00459 Inositol monophosphatase family 40 226 4.4E-33 T 10-03-2017 IPR000760 Inositol monophosphatase GO:0046854 CpPa04_RS03220 e6acdbde1dd29d526a40e7b2166180df 252 SUPERFAMILY SSF56655 13 246 3.27E-52 T 10-03-2017 CpPa04_RS03220 e6acdbde1dd29d526a40e7b2166180df 252 Gene3D G3DSA:3.40.190.80 145 247 9.6E-23 T 10-03-2017 CpPa04_RS01590 b4eb3d6ec540b584053648be9b86bef9 236 PIRSF PIRSF002155 2 228 7.6E-70 T 10-03-2017 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01590 b4eb3d6ec540b584053648be9b86bef9 236 Gene3D G3DSA:3.30.190.20 19 69 3.7E-40 T 10-03-2017 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 CpPa04_RS01590 b4eb3d6ec540b584053648be9b86bef9 236 Gene3D G3DSA:3.30.190.20 162 227 3.7E-40 T 10-03-2017 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 CpPa04_RS01590 b4eb3d6ec540b584053648be9b86bef9 236 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 4 228 2.6E-98 T 10-03-2017 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CpPa04_RS01590 b4eb3d6ec540b584053648be9b86bef9 236 Gene3D G3DSA:3.40.50.790 70 160 3.4E-41 T 10-03-2017 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CpPa04_RS01590 b4eb3d6ec540b584053648be9b86bef9 236 SUPERFAMILY SSF56808 7 227 1.96E-78 T 10-03-2017 IPR023674 Ribosomal protein L1-like CpPa04_RS01590 b4eb3d6ec540b584053648be9b86bef9 236 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 3 230 41.464 T 10-03-2017 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CpPa04_RS01590 b4eb3d6ec540b584053648be9b86bef9 236 ProSitePatterns PS01199 Ribosomal protein L1 signature. 122 140 - T 10-03-2017 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01590 b4eb3d6ec540b584053648be9b86bef9 236 Pfam PF00687 Ribosomal protein L1p/L10e family 32 221 2.9E-48 T 10-03-2017 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CpPa04_RS02415 18d3780bb5b999905c38b138ea6fb0b5 398 Pfam PF07687 Peptidase dimerisation domain 188 275 2.0E-9 T 10-03-2017 IPR011650 Peptidase M20, dimerisation domain CpPa04_RS02415 18d3780bb5b999905c38b138ea6fb0b5 398 Gene3D G3DSA:3.40.630.10 4 180 6.9E-81 T 10-03-2017 CpPa04_RS02415 18d3780bb5b999905c38b138ea6fb0b5 398 Gene3D G3DSA:3.40.630.10 300 394 6.9E-81 T 10-03-2017 CpPa04_RS02415 18d3780bb5b999905c38b138ea6fb0b5 398 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 21 375 4.5E-91 T 10-03-2017 IPR017439 Amidohydrolase GO:0016787 CpPa04_RS02415 18d3780bb5b999905c38b138ea6fb0b5 398 SUPERFAMILY SSF55031 184 300 1.64E-23 T 10-03-2017 IPR011650 Peptidase M20, dimerisation domain CpPa04_RS02415 18d3780bb5b999905c38b138ea6fb0b5 398 Pfam PF01546 Peptidase family M20/M25/M40 76 384 6.7E-26 T 10-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CpPa04_RS02415 18d3780bb5b999905c38b138ea6fb0b5 398 Gene3D G3DSA:3.30.70.360 184 299 1.4E-27 T 10-03-2017 IPR011650 Peptidase M20, dimerisation domain CpPa04_RS02415 18d3780bb5b999905c38b138ea6fb0b5 398 SUPERFAMILY SSF53187 8 199 2.18E-66 T 10-03-2017 CpPa04_RS02415 18d3780bb5b999905c38b138ea6fb0b5 398 SUPERFAMILY SSF53187 300 389 2.18E-66 T 10-03-2017 CpPa04_RS02415 18d3780bb5b999905c38b138ea6fb0b5 398 PIRSF PIRSF005962 4 391 7.2E-102 T 10-03-2017 IPR017439 Amidohydrolase GO:0016787 CpPa04_RS06395 2f21466067a2dc6293f42ad9557c15cd 175 Gene3D G3DSA:3.90.950.20 12 175 1.6E-54 T 10-03-2017 IPR008136 CinA, C-terminal CpPa04_RS06395 2f21466067a2dc6293f42ad9557c15cd 175 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 15 133 3.6E-30 T 10-03-2017 IPR008136 CinA, C-terminal CpPa04_RS06395 2f21466067a2dc6293f42ad9557c15cd 175 Pfam PF02464 Competence-damaged protein 12 171 1.6E-41 T 10-03-2017 IPR008136 CinA, C-terminal CpPa04_RS06395 2f21466067a2dc6293f42ad9557c15cd 175 SUPERFAMILY SSF142433 12 174 2.62E-41 T 10-03-2017 IPR008136 CinA, C-terminal CpPa04_RS05705 fe62f7b26c18fcccc13f235461c6eb1c 676 Gene3D G3DSA:3.40.50.300 178 297 1.7E-6 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05705 fe62f7b26c18fcccc13f235461c6eb1c 676 Hamap MF_00983 Probable primosomal protein N' [priA]. 19 675 19.925 T 10-03-2017 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CpPa04_RS05705 fe62f7b26c18fcccc13f235461c6eb1c 676 SUPERFAMILY SSF52540 182 252 3.12E-6 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05280 cc317a2985522c4182a6026752e41181 510 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 230 372 1.4E-46 T 10-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 CpPa04_RS05280 cc317a2985522c4182a6026752e41181 510 Gene3D G3DSA:3.40.50.300 181 390 5.5E-60 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05280 cc317a2985522c4182a6026752e41181 510 SUPERFAMILY SSF52540 188 453 3.6E-52 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05280 cc317a2985522c4182a6026752e41181 510 Hamap MF_02112 Proteasome-associated ATPase [mpa]. 12 507 47.711 T 10-03-2017 IPR022482 Proteasome ATPase GO:0000502|GO:0010498|GO:0016887|GO:0019941 CpPa04_RS05280 cc317a2985522c4182a6026752e41181 510 TIGRFAM TIGR03689 pup_AAA: proteasome ATPase 11 506 6.1E-236 T 10-03-2017 IPR022482 Proteasome ATPase GO:0000502|GO:0010498|GO:0016887|GO:0019941 CpPa04_RS05280 cc317a2985522c4182a6026752e41181 510 SMART SM00382 226 375 2.1E-21 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS05280 cc317a2985522c4182a6026752e41181 510 ProSitePatterns PS00674 AAA-protein family signature. 343 361 - T 10-03-2017 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CpPa04_RS05280 cc317a2985522c4182a6026752e41181 510 Pfam PF16450 Proteasomal ATPase OB/ID domain 54 187 1.5E-46 T 10-03-2017 IPR032501 Proteasomal ATPase, OB/ID domain CpPa04_RS01980 8f138bde910a1a6cd10bb4158cf17b9c 246 Gene3D G3DSA:2.40.440.10 141 246 6.3E-17 T 10-03-2017 CpPa04_RS01980 8f138bde910a1a6cd10bb4158cf17b9c 246 Pfam PF03734 L,D-transpeptidase catalytic domain 141 245 4.2E-15 T 10-03-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CpPa04_RS01980 8f138bde910a1a6cd10bb4158cf17b9c 246 SUPERFAMILY SSF141523 139 246 2.09E-23 T 10-03-2017 CpPa04_RS02105 ca6c072fd7899c53e14d7a497a9cc9bc 370 Pfam PF00842 Alanine racemase, C-terminal domain 241 365 6.8E-35 T 10-03-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CpPa04_RS02105 ca6c072fd7899c53e14d7a497a9cc9bc 370 Hamap MF_01201 Alanine racemase. 1 367 30.714 T 10-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CpPa04_RS02105 ca6c072fd7899c53e14d7a497a9cc9bc 370 SUPERFAMILY SSF51419 8 236 1.16E-59 T 10-03-2017 IPR029066 PLP-binding barrel CpPa04_RS02105 ca6c072fd7899c53e14d7a497a9cc9bc 370 Gene3D G3DSA:3.20.20.10 10 223 3.0E-69 T 10-03-2017 IPR029066 PLP-binding barrel CpPa04_RS02105 ca6c072fd7899c53e14d7a497a9cc9bc 370 SMART SM01005 241 367 2.1E-50 T 10-03-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CpPa04_RS02105 ca6c072fd7899c53e14d7a497a9cc9bc 370 Pfam PF01168 Alanine racemase, N-terminal domain 8 230 7.2E-65 T 10-03-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CpPa04_RS02105 ca6c072fd7899c53e14d7a497a9cc9bc 370 PRINTS PR00992 Alanine racemase signature 203 230 5.7E-60 T 10-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CpPa04_RS02105 ca6c072fd7899c53e14d7a497a9cc9bc 370 PRINTS PR00992 Alanine racemase signature 28 44 5.7E-60 T 10-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CpPa04_RS02105 ca6c072fd7899c53e14d7a497a9cc9bc 370 PRINTS PR00992 Alanine racemase signature 295 312 5.7E-60 T 10-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CpPa04_RS02105 ca6c072fd7899c53e14d7a497a9cc9bc 370 PRINTS PR00992 Alanine racemase signature 64 82 5.7E-60 T 10-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CpPa04_RS02105 ca6c072fd7899c53e14d7a497a9cc9bc 370 PRINTS PR00992 Alanine racemase signature 274 289 5.7E-60 T 10-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CpPa04_RS02105 ca6c072fd7899c53e14d7a497a9cc9bc 370 PRINTS PR00992 Alanine racemase signature 126 138 5.7E-60 T 10-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CpPa04_RS02105 ca6c072fd7899c53e14d7a497a9cc9bc 370 PRINTS PR00992 Alanine racemase signature 257 272 5.7E-60 T 10-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CpPa04_RS02105 ca6c072fd7899c53e14d7a497a9cc9bc 370 PRINTS PR00992 Alanine racemase signature 349 362 5.7E-60 T 10-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CpPa04_RS02105 ca6c072fd7899c53e14d7a497a9cc9bc 370 PRINTS PR00992 Alanine racemase signature 160 171 5.7E-60 T 10-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CpPa04_RS02105 ca6c072fd7899c53e14d7a497a9cc9bc 370 TIGRFAM TIGR00492 alr: alanine racemase 6 364 2.5E-91 T 10-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CpPa04_RS02105 ca6c072fd7899c53e14d7a497a9cc9bc 370 SUPERFAMILY SSF50621 234 367 3.49E-39 T 10-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CpPa04_RS02105 ca6c072fd7899c53e14d7a497a9cc9bc 370 Gene3D G3DSA:2.40.37.10 224 366 1.7E-47 T 10-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CpPa04_RS09205 62e6881a07cad259e88c9dccbec1575f 453 SUPERFAMILY SSF53187 364 451 6.01E-48 T 10-03-2017 CpPa04_RS09205 62e6881a07cad259e88c9dccbec1575f 453 SUPERFAMILY SSF53187 7 200 6.01E-48 T 10-03-2017 CpPa04_RS09205 62e6881a07cad259e88c9dccbec1575f 453 Pfam PF01546 Peptidase family M20/M25/M40 87 445 5.1E-29 T 10-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CpPa04_RS09205 62e6881a07cad259e88c9dccbec1575f 453 Gene3D G3DSA:3.40.630.10 8 194 1.4E-51 T 10-03-2017 CpPa04_RS09205 62e6881a07cad259e88c9dccbec1575f 453 Gene3D G3DSA:3.40.630.10 363 451 1.4E-51 T 10-03-2017 CpPa04_RS09205 62e6881a07cad259e88c9dccbec1575f 453 Pfam PF07687 Peptidase dimerisation domain 201 350 2.4E-16 T 10-03-2017 IPR011650 Peptidase M20, dimerisation domain CpPa04_RS09205 62e6881a07cad259e88c9dccbec1575f 453 Gene3D G3DSA:3.30.70.360 200 355 3.5E-36 T 10-03-2017 IPR011650 Peptidase M20, dimerisation domain CpPa04_RS09205 62e6881a07cad259e88c9dccbec1575f 453 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 86 95 - T 10-03-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CpPa04_RS00585 a398a6dc0f7627f74eedded9e7d2d725 264 Pfam PF00005 ABC transporter 48 178 6.2E-20 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS00585 a398a6dc0f7627f74eedded9e7d2d725 264 SMART SM00382 57 231 4.6E-5 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS00585 a398a6dc0f7627f74eedded9e7d2d725 264 Gene3D G3DSA:3.40.50.300 45 246 6.2E-41 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00585 a398a6dc0f7627f74eedded9e7d2d725 264 SUPERFAMILY SSF52540 45 244 1.3E-41 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07735 6aabca80831957afc46d22abece239e8 305 Hamap MF_00367 GTPase Era [era]. 10 305 33.459 T 10-03-2017 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 CpPa04_RS07735 6aabca80831957afc46d22abece239e8 305 Gene3D G3DSA:3.40.50.300 8 181 3.9E-38 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07735 6aabca80831957afc46d22abece239e8 305 SUPERFAMILY SSF52540 15 226 1.05E-38 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07735 6aabca80831957afc46d22abece239e8 305 Gene3D G3DSA:3.30.300.20 197 300 4.7E-31 T 10-03-2017 IPR015946 K homology domain-like, alpha/beta CpPa04_RS07735 6aabca80831957afc46d22abece239e8 305 Pfam PF01926 50S ribosome-binding GTPase 15 123 1.3E-19 T 10-03-2017 IPR006073 GTP binding domain GO:0005525 CpPa04_RS07735 6aabca80831957afc46d22abece239e8 305 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 174 1.6E-16 T 10-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CpPa04_RS07735 6aabca80831957afc46d22abece239e8 305 TIGRFAM TIGR00436 era: GTP-binding protein Era 13 288 1.3E-64 T 10-03-2017 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 CpPa04_RS07735 6aabca80831957afc46d22abece239e8 305 SUPERFAMILY SSF54814 188 305 1.77E-32 T 10-03-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 CpPa04_RS07735 6aabca80831957afc46d22abece239e8 305 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 15 35 2.0E-7 T 10-03-2017 IPR006073 GTP binding domain GO:0005525 CpPa04_RS07735 6aabca80831957afc46d22abece239e8 305 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 37 55 2.0E-7 T 10-03-2017 IPR006073 GTP binding domain GO:0005525 CpPa04_RS07735 6aabca80831957afc46d22abece239e8 305 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 91 106 2.0E-7 T 10-03-2017 IPR006073 GTP binding domain GO:0005525 CpPa04_RS07735 6aabca80831957afc46d22abece239e8 305 Pfam PF07650 KH domain 215 294 2.0E-14 T 10-03-2017 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS10680 bf7380a59505c8036d35d0c71f95c2f4 350 SUPERFAMILY SSF110849 88 229 2.12E-31 T 10-03-2017 IPR003115 ParB/Sulfiredoxin CpPa04_RS10680 bf7380a59505c8036d35d0c71f95c2f4 350 Gene3D G3DSA:3.90.1530.10 80 184 2.1E-40 T 10-03-2017 CpPa04_RS10680 bf7380a59505c8036d35d0c71f95c2f4 350 Pfam PF02195 ParB-like nuclease domain 89 178 3.1E-27 T 10-03-2017 IPR003115 ParB/Sulfiredoxin CpPa04_RS10680 bf7380a59505c8036d35d0c71f95c2f4 350 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 85 264 2.3E-63 T 10-03-2017 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CpPa04_RS10680 bf7380a59505c8036d35d0c71f95c2f4 350 SMART SM00470 88 178 1.9E-37 T 10-03-2017 IPR003115 ParB/Sulfiredoxin CpPa04_RS04420 ae6a2bfbc948052b76a04495ae6d8e36 220 SUPERFAMILY SSF55021 3 71 2.17E-5 T 10-03-2017 CpPa04_RS08300 6e78343c4ca03b4c84445f86f6cb611b 204 Pfam PF00857 Isochorismatase family 23 202 4.3E-28 T 10-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CpPa04_RS08300 6e78343c4ca03b4c84445f86f6cb611b 204 Gene3D G3DSA:3.40.50.850 22 203 4.4E-53 T 10-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CpPa04_RS08300 6e78343c4ca03b4c84445f86f6cb611b 204 SUPERFAMILY SSF52499 22 203 3.14E-44 T 10-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CpPa04_RS08495 901a2a72274c2d62a3216fe554061f03 276 SUPERFAMILY SSF52402 4 275 9.08E-75 T 10-03-2017 CpPa04_RS08495 901a2a72274c2d62a3216fe554061f03 276 Pfam PF02540 NAD synthase 24 266 1.1E-63 T 10-03-2017 IPR022310 NAD/GMP synthase CpPa04_RS08495 901a2a72274c2d62a3216fe554061f03 276 TIGRFAM TIGR00552 nadE: NAD+ synthetase 19 274 1.3E-68 T 10-03-2017 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 CpPa04_RS08495 901a2a72274c2d62a3216fe554061f03 276 Gene3D G3DSA:3.40.50.620 8 268 5.5E-67 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS08495 901a2a72274c2d62a3216fe554061f03 276 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 18 269 29.87 T 10-03-2017 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 CpPa04_RS05015 2f2df13bab75e61d3165590c7c8365f3 343 Gene3D G3DSA:1.10.3470.10 16 336 3.8E-80 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS05015 2f2df13bab75e61d3165590c7c8365f3 343 SUPERFAMILY SSF81345 19 335 2.62E-69 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS05015 2f2df13bab75e61d3165590c7c8365f3 343 Pfam PF01032 FecCD transport family 33 335 1.4E-76 T 10-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CpPa04_RS08585 c1e44b95e63dbadd92f486dfcfc696e7 249 SUPERFAMILY SSF52540 15 229 2.99E-66 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08585 c1e44b95e63dbadd92f486dfcfc696e7 249 Pfam PF00005 ABC transporter 30 176 3.7E-29 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS08585 c1e44b95e63dbadd92f486dfcfc696e7 249 SMART SM00382 39 225 9.2E-13 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS08585 c1e44b95e63dbadd92f486dfcfc696e7 249 Gene3D G3DSA:3.40.50.300 15 231 1.1E-66 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00845 87eac489e5f2ba660027612932dc2a00 221 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 10 214 2.2E-65 T 10-03-2017 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-71336 CpPa04_RS00845 87eac489e5f2ba660027612932dc2a00 221 SMART SM01133 9 218 7.9E-78 T 10-03-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 CpPa04_RS00845 87eac489e5f2ba660027612932dc2a00 221 PIRSF PIRSF001357 3 220 5.6E-68 T 10-03-2017 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-71336 CpPa04_RS00845 87eac489e5f2ba660027612932dc2a00 221 SUPERFAMILY SSF51569 5 218 4.5E-69 T 10-03-2017 CpPa04_RS00845 87eac489e5f2ba660027612932dc2a00 221 Pfam PF01791 DeoC/LacD family aldolase 12 204 6.8E-18 T 10-03-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 CpPa04_RS00845 87eac489e5f2ba660027612932dc2a00 221 Gene3D G3DSA:3.20.20.70 3 219 1.5E-84 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS00845 87eac489e5f2ba660027612932dc2a00 221 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 8 220 32.185 T 10-03-2017 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 CpPa04_RS05625 a07172b845815c357ba4a29761b0662e 259 ProSitePatterns PS00171 Triosephosphate isomerase active site. 170 180 - T 10-03-2017 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05625 a07172b845815c357ba4a29761b0662e 259 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 3 255 39.277 T 10-03-2017 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05625 a07172b845815c357ba4a29761b0662e 259 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 6 244 1.6E-59 T 10-03-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05625 a07172b845815c357ba4a29761b0662e 259 SUPERFAMILY SSF51351 1 252 4.84E-88 T 10-03-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05625 a07172b845815c357ba4a29761b0662e 259 Pfam PF00121 Triosephosphate isomerase 6 251 9.1E-87 T 10-03-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CpPa04_RS05625 a07172b845815c357ba4a29761b0662e 259 Gene3D G3DSA:3.20.20.70 3 254 3.6E-102 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS10355 c18a04465fb139ca1ad56f00bbcbf8fe 153 SMART SM00347 26 126 5.6E-18 T 10-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CpPa04_RS10355 c18a04465fb139ca1ad56f00bbcbf8fe 153 Gene3D G3DSA:1.10.10.10 9 137 5.9E-29 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS10355 c18a04465fb139ca1ad56f00bbcbf8fe 153 SUPERFAMILY SSF46785 7 137 4.56E-27 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS10355 c18a04465fb139ca1ad56f00bbcbf8fe 153 Pfam PF01047 MarR family 33 91 3.0E-15 T 10-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CpPa04_RS03560 2850a8fd5117234691dda850b582a7d8 186 Pfam PF01195 Peptidyl-tRNA hydrolase 6 181 4.1E-49 T 10-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CpPa04_RS03560 2850a8fd5117234691dda850b582a7d8 186 Gene3D G3DSA:3.40.50.1470 3 183 3.5E-63 T 10-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CpPa04_RS03560 2850a8fd5117234691dda850b582a7d8 186 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 185 29.661 T 10-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CpPa04_RS03560 2850a8fd5117234691dda850b582a7d8 186 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 6 183 9.2E-48 T 10-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CpPa04_RS03560 2850a8fd5117234691dda850b582a7d8 186 SUPERFAMILY SSF53178 5 182 8.5E-58 T 10-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CpPa04_RS03560 2850a8fd5117234691dda850b582a7d8 186 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 114 124 - T 10-03-2017 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CpPa04_RS03560 2850a8fd5117234691dda850b582a7d8 186 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 10-03-2017 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CpPa04_RS01910 bd4fec03e0007a80324a9198e238cf4b 148 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 7 148 19.043 T 10-03-2017 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 CpPa04_RS01910 bd4fec03e0007a80324a9198e238cf4b 148 Gene3D G3DSA:3.100.10.10 35 146 1.4E-32 T 10-03-2017 CpPa04_RS01910 bd4fec03e0007a80324a9198e238cf4b 148 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 30 145 2.6E-31 T 10-03-2017 IPR021131 Ribosomal protein L18e/L15P CpPa04_RS01910 bd4fec03e0007a80324a9198e238cf4b 148 ProSitePatterns PS00475 Ribosomal protein L15 signature. 112 142 - T 10-03-2017 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CpPa04_RS01910 bd4fec03e0007a80324a9198e238cf4b 148 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 6 145 4.4E-44 T 10-03-2017 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS01910 bd4fec03e0007a80324a9198e238cf4b 148 SUPERFAMILY SSF52080 8 146 2.62E-39 T 10-03-2017 IPR021131 Ribosomal protein L18e/L15P CpPa04_RS06610 07eaadb913ef4b3e91285b25f7020b8d 404 Gene3D G3DSA:2.30.42.10 94 214 1.1E-19 T 10-03-2017 IPR001478 PDZ domain GO:0005515 CpPa04_RS06610 07eaadb913ef4b3e91285b25f7020b8d 404 SMART SM00228 115 206 5.9E-4 T 10-03-2017 IPR001478 PDZ domain GO:0005515 CpPa04_RS06610 07eaadb913ef4b3e91285b25f7020b8d 404 Pfam PF13180 PDZ domain 159 215 2.3E-10 T 10-03-2017 IPR001478 PDZ domain GO:0005515 CpPa04_RS06610 07eaadb913ef4b3e91285b25f7020b8d 404 SUPERFAMILY SSF50156 148 213 1.45E-13 T 10-03-2017 IPR001478 PDZ domain GO:0005515 CpPa04_RS06610 07eaadb913ef4b3e91285b25f7020b8d 404 Pfam PF02163 Peptidase family M50 10 354 1.6E-51 T 10-03-2017 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033 CpPa04_RS10380 123401bbe9dcbe3a474ccc40dc5fcd81 219 Pfam PF09335 SNARE associated Golgi protein 39 166 3.9E-21 T 10-03-2017 IPR032816 SNARE associated Golgi protein CpPa04_RS03170 2c30422025c04ad1f24971780e0a8129 318 Gene3D G3DSA:1.10.3720.10 97 307 2.1E-12 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS03170 2c30422025c04ad1f24971780e0a8129 318 SUPERFAMILY SSF161098 97 300 2.35E-12 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS03170 2c30422025c04ad1f24971780e0a8129 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 138 316 5.4E-20 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS06845 0b5a55106c5bef784e06ca6388f4f22f 802 PIRSF PIRSF000460 1 802 8.2E-212 T 10-03-2017 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CpPa04_RS06845 0b5a55106c5bef784e06ca6388f4f22f 802 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 635 647 - T 10-03-2017 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CpPa04_RS06845 0b5a55106c5bef784e06ca6388f4f22f 802 Gene3D G3DSA:3.40.50.2000 9 458 6.1E-177 T 10-03-2017 CpPa04_RS06845 0b5a55106c5bef784e06ca6388f4f22f 802 SUPERFAMILY SSF53756 11 799 3.14E-286 T 10-03-2017 CpPa04_RS06845 0b5a55106c5bef784e06ca6388f4f22f 802 Gene3D G3DSA:3.40.50.2000 459 781 1.3E-120 T 10-03-2017 CpPa04_RS06845 0b5a55106c5bef784e06ca6388f4f22f 802 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 14 796 0.0 T 10-03-2017 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CpPa04_RS06845 0b5a55106c5bef784e06ca6388f4f22f 802 Pfam PF00343 Carbohydrate phosphorylase 102 796 1.6E-291 T 10-03-2017 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CpPa04_RS01390 448b783ab3b97bf0f914b2c7721510a1 454 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 3 417 4.7E-107 T 10-03-2017 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CpPa04_RS01390 448b783ab3b97bf0f914b2c7721510a1 454 Gene3D G3DSA:3.40.50.720 175 312 8.8E-25 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS01390 448b783ab3b97bf0f914b2c7721510a1 454 SUPERFAMILY SSF69742 3 158 1.7E-41 T 10-03-2017 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CpPa04_RS01390 448b783ab3b97bf0f914b2c7721510a1 454 SUPERFAMILY SSF69075 317 417 5.49E-16 T 10-03-2017 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CpPa04_RS01390 448b783ab3b97bf0f914b2c7721510a1 454 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 415 24.954 T 10-03-2017 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CpPa04_RS01390 448b783ab3b97bf0f914b2c7721510a1 454 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 2.7E-41 T 10-03-2017 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CpPa04_RS01390 448b783ab3b97bf0f914b2c7721510a1 454 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 179 307 7.7E-25 T 10-03-2017 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CpPa04_RS01390 448b783ab3b97bf0f914b2c7721510a1 454 PIRSF PIRSF000445 1 427 1.8E-123 T 10-03-2017 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CpPa04_RS01390 448b783ab3b97bf0f914b2c7721510a1 454 SUPERFAMILY SSF51735 177 311 1.28E-19 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS01390 448b783ab3b97bf0f914b2c7721510a1 454 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 319 417 2.2E-19 T 10-03-2017 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CpPa04_RS06085 a442e33d721f9cc019194b0ce87c62df 136 Gene3D G3DSA:2.170.150.20 7 132 3.4E-56 T 10-03-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CpPa04_RS06085 a442e33d721f9cc019194b0ce87c62df 136 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 8 129 1.4E-45 T 10-03-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CpPa04_RS06085 a442e33d721f9cc019194b0ce87c62df 136 Pfam PF01641 SelR domain 11 131 9.9E-51 T 10-03-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CpPa04_RS06085 a442e33d721f9cc019194b0ce87c62df 136 SUPERFAMILY SSF51316 7 132 8.37E-53 T 10-03-2017 IPR011057 Mss4-like CpPa04_RS04740 ed514999a561d3f45a2be6c3783e876f 670 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 524 644 2.8E-41 T 10-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CpPa04_RS04740 ed514999a561d3f45a2be6c3783e876f 670 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 10-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CpPa04_RS04740 ed514999a561d3f45a2be6c3783e876f 670 SUPERFAMILY SSF55604 8 82 6.54E-18 T 10-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CpPa04_RS04740 ed514999a561d3f45a2be6c3783e876f 670 Pfam PF02378 Phosphotransferase system, EIIC 121 403 1.8E-24 T 10-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CpPa04_RS04740 ed514999a561d3f45a2be6c3783e876f 670 Pfam PF00367 phosphotransferase system, EIIB 11 42 2.6E-14 T 10-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CpPa04_RS04740 ed514999a561d3f45a2be6c3783e876f 670 Gene3D G3DSA:2.70.70.10 524 668 2.3E-51 T 10-03-2017 CpPa04_RS04740 ed514999a561d3f45a2be6c3783e876f 670 SUPERFAMILY SSF51261 520 659 4.01E-47 T 10-03-2017 IPR011055 Duplicated hybrid motif CpPa04_RS04740 ed514999a561d3f45a2be6c3783e876f 670 Gene3D G3DSA:3.30.1360.60 4 82 1.5E-22 T 10-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CpPa04_RS04740 ed514999a561d3f45a2be6c3783e876f 670 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 524 646 1.2E-45 T 10-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CpPa04_RS04740 ed514999a561d3f45a2be6c3783e876f 670 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 586 598 - T 10-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CpPa04_RS10385 fca60d202b1938d5f5438467c0f8ccea 163 Pfam PF00210 Ferritin-like domain 18 158 2.7E-27 T 10-03-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CpPa04_RS10385 fca60d202b1938d5f5438467c0f8ccea 163 PIRSF PIRSF005900 1 162 6.1E-51 T 10-03-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CpPa04_RS10385 fca60d202b1938d5f5438467c0f8ccea 163 SUPERFAMILY SSF47240 4 159 5.55E-40 T 10-03-2017 IPR009078 Ferritin-like superfamily CpPa04_RS10385 fca60d202b1938d5f5438467c0f8ccea 163 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 134 152 2.4E-13 T 10-03-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CpPa04_RS10385 fca60d202b1938d5f5438467c0f8ccea 163 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 39 55 2.4E-13 T 10-03-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CpPa04_RS10385 fca60d202b1938d5f5438467c0f8ccea 163 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 63 79 2.4E-13 T 10-03-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CpPa04_RS10385 fca60d202b1938d5f5438467c0f8ccea 163 ProSitePatterns PS00818 Dps protein family signature 1. 39 55 - T 10-03-2017 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 CpPa04_RS10385 fca60d202b1938d5f5438467c0f8ccea 163 Gene3D G3DSA:1.20.1260.10 3 157 9.0E-47 T 10-03-2017 IPR012347 Ferritin-related CpPa04_RS06130 fb7895feff1edc427f18c60393aaaf7a 165 Pfam PF11292 Protein of unknown function (DUF3093) 13 155 4.4E-50 T 10-03-2017 IPR021443 Protein of unknown function DUF3093 CpPa04_RS07840 4c821005cdad295171abf0e24817a1b2 284 Pfam PF00296 Luciferase-like monooxygenase 22 205 7.8E-34 T 10-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CpPa04_RS07840 4c821005cdad295171abf0e24817a1b2 284 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 7 213 8.5E-95 T 10-03-2017 IPR019949 Luciferase family oxidoreductase, group 1 CpPa04_RS07840 4c821005cdad295171abf0e24817a1b2 284 Gene3D G3DSA:3.20.20.30 2 277 1.3E-69 T 10-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CpPa04_RS07840 4c821005cdad295171abf0e24817a1b2 284 SUPERFAMILY SSF51679 6 275 4.06E-65 T 10-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CpPa04_RS05175 45265b88dcbdf834620e0b4a7f6f89f0 130 Hamap MF_01483 RNA polymerase-binding protein RbpA [rbpA]. 16 111 20.55 T 10-03-2017 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 CpPa04_RS05175 45265b88dcbdf834620e0b4a7f6f89f0 130 Pfam PF13397 RNA polymerase-binding protein 4 106 8.2E-37 T 10-03-2017 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 CpPa04_RS10540 167bef537e9a2df63dc871e55960115b 368 Pfam PF14094 Domain of unknown function (DUF4272) 124 359 2.0E-48 T 10-03-2017 IPR025368 Protein of unknown function DUF4272 CpPa04_RS02340 6f88ad24f36e4a7feb813845d27f66f8 736 Gene3D G3DSA:3.40.718.10 334 357 2.3E-39 T 10-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CpPa04_RS02340 6f88ad24f36e4a7feb813845d27f66f8 736 Gene3D G3DSA:3.40.718.10 533 642 2.3E-39 T 10-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CpPa04_RS02340 6f88ad24f36e4a7feb813845d27f66f8 736 Gene3D G3DSA:3.40.718.10 144 284 2.3E-39 T 10-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CpPa04_RS02340 6f88ad24f36e4a7feb813845d27f66f8 736 SUPERFAMILY SSF53659 2 735 0.0 T 10-03-2017 CpPa04_RS02340 6f88ad24f36e4a7feb813845d27f66f8 736 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 736 0.0 T 10-03-2017 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CpPa04_RS02340 6f88ad24f36e4a7feb813845d27f66f8 736 PIRSF PIRSF009407 1 736 0.0 T 10-03-2017 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CpPa04_RS02340 6f88ad24f36e4a7feb813845d27f66f8 736 Pfam PF03971 Monomeric isocitrate dehydrogenase 3 732 0.0 T 10-03-2017 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CpPa04_RS02195 32fc630655511a740d7184a1c1dd1e5e 350 Pfam PF04024 PspC domain 25 73 6.4E-14 T 10-03-2017 IPR007168 Phage shock protein, PspC, N-terminal CpPa04_RS05545 6355820f96d20b1b0abba94e3d7e596c 252 SUPERFAMILY SSF52540 6 237 1.18E-38 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05545 6355820f96d20b1b0abba94e3d7e596c 252 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 4 249 2.3E-102 T 10-03-2017 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 CpPa04_RS05545 6355820f96d20b1b0abba94e3d7e596c 252 Gene3D G3DSA:3.40.50.300 3 237 6.1E-43 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05545 6355820f96d20b1b0abba94e3d7e596c 252 Pfam PF00005 ABC transporter 26 177 7.3E-20 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS06205 776ba0b6ad81831d651daadce9cab67c 337 Pfam PF09754 PAC2 family 32 248 4.4E-44 T 10-03-2017 IPR019151 Proteasome assembly chaperone 2 CpPa04_RS06205 776ba0b6ad81831d651daadce9cab67c 337 SUPERFAMILY SSF159659 8 272 1.57E-84 T 10-03-2017 CpPa04_RS06205 776ba0b6ad81831d651daadce9cab67c 337 PIRSF PIRSF028754 9 315 4.2E-111 T 10-03-2017 IPR008492 Protein of unknown function DUF774 CpPa04_RS06205 776ba0b6ad81831d651daadce9cab67c 337 Gene3D G3DSA:1.10.287.100 230 274 1.4E-17 T 10-03-2017 IPR013028 Transcription factor IIA, alpha subunit, N-terminal GO:0006367 CpPa04_RS02885 0cda51f1af1d1c78f84540e25084f99a 518 SUPERFAMILY SSF52096 7 253 9.96E-72 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS02885 0cda51f1af1d1c78f84540e25084f99a 518 Gene3D G3DSA:3.90.226.10 6 252 1.9E-74 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS02885 0cda51f1af1d1c78f84540e25084f99a 518 Gene3D G3DSA:3.90.226.10 253 515 3.1E-98 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS02885 0cda51f1af1d1c78f84540e25084f99a 518 SUPERFAMILY SSF52096 246 515 4.54E-90 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS02885 0cda51f1af1d1c78f84540e25084f99a 518 Pfam PF01039 Carboxyl transferase domain 32 514 8.5E-187 T 10-03-2017 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CpPa04_RS02885 0cda51f1af1d1c78f84540e25084f99a 518 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 99 113 1.5E-5 T 10-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 CpPa04_RS02885 0cda51f1af1d1c78f84540e25084f99a 518 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 133 151 1.5E-5 T 10-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 CpPa04_RS02885 0cda51f1af1d1c78f84540e25084f99a 518 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 169 186 1.5E-5 T 10-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 CpPa04_RS01670 cbe0ef461fcfbae06bea2f6c80ddbb6f 234 SUPERFAMILY SSF46894 161 226 3.74E-21 T 10-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CpPa04_RS01670 cbe0ef461fcfbae06bea2f6c80ddbb6f 234 Pfam PF00072 Response regulator receiver domain 6 122 4.5E-25 T 10-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CpPa04_RS01670 cbe0ef461fcfbae06bea2f6c80ddbb6f 234 SMART SM00421 163 220 1.2E-24 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS01670 cbe0ef461fcfbae06bea2f6c80ddbb6f 234 SUPERFAMILY SSF52172 1 134 3.27E-30 T 10-03-2017 IPR011006 CheY-like superfamily CpPa04_RS01670 cbe0ef461fcfbae06bea2f6c80ddbb6f 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 180 1.7E-13 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS01670 cbe0ef461fcfbae06bea2f6c80ddbb6f 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 208 1.7E-13 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS01670 cbe0ef461fcfbae06bea2f6c80ddbb6f 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 196 1.7E-13 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS01670 cbe0ef461fcfbae06bea2f6c80ddbb6f 234 Gene3D G3DSA:1.10.10.10 168 225 5.4E-26 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS01670 cbe0ef461fcfbae06bea2f6c80ddbb6f 234 Gene3D G3DSA:3.40.50.2300 1 167 5.7E-38 T 10-03-2017 CpPa04_RS01670 cbe0ef461fcfbae06bea2f6c80ddbb6f 234 SMART SM00448 2 121 8.1E-29 T 10-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CpPa04_RS01670 cbe0ef461fcfbae06bea2f6c80ddbb6f 234 Pfam PF00196 Bacterial regulatory proteins, luxR family 165 220 6.1E-18 T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS01670 cbe0ef461fcfbae06bea2f6c80ddbb6f 234 ProSitePatterns PS00622 LuxR-type HTH domain signature. 180 207 - T 10-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CpPa04_RS10420 72b40df46bd16fd40d56b2bf023c7e13 350 Pfam PF02687 FtsX-like permease family 236 342 5.5E-14 T 10-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 CpPa04_RS03795 ad7a66b9eaee117b8408856c3e3172c8 174 SUPERFAMILY SSF160387 39 164 1.44E-16 T 10-03-2017 CpPa04_RS03795 ad7a66b9eaee117b8408856c3e3172c8 174 Pfam PF03243 Alkylmercury lyase 35 156 7.3E-19 T 10-03-2017 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 CpPa04_RS01125 30e4debd575001bdadd4ef25d9adcd03 207 Pfam PF00482 Type II secretion system (T2SS), protein F 67 193 3.5E-12 T 10-03-2017 IPR018076 Type II secretion system F domain CpPa04_RS04405 8d0a0890a24a34719fa56233fc20c7b0 323 SUPERFAMILY SSF51726 82 193 1.03E-7 T 10-03-2017 CpPa04_RS02330 c5c885ecc6dfbe579d7ecdbfb5177075 302 Pfam PF04213 Htaa 35 194 4.1E-22 T 10-03-2017 IPR007331 Htaa CpPa04_RS04330 eb3447d5bf84057abdf8e791242de767 227 Hamap MF_00722 Endonuclease NucS [nucS]. 1 219 33.088 T 10-03-2017 IPR002793 Endonuclease NucS CpPa04_RS04330 eb3447d5bf84057abdf8e791242de767 227 Pfam PF01939 Protein of unknown function DUF91 2 227 1.8E-84 T 10-03-2017 IPR002793 Endonuclease NucS CpPa04_RS00520 64f38c4c3c124c814ec740f1a7522ac6 488 Gene3D G3DSA:3.30.465.10 98 216 4.5E-28 T 10-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CpPa04_RS00520 64f38c4c3c124c814ec740f1a7522ac6 488 Pfam PF01565 FAD binding domain 44 181 1.6E-26 T 10-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CpPa04_RS00520 64f38c4c3c124c814ec740f1a7522ac6 488 SUPERFAMILY SSF56176 26 215 1.21E-38 T 10-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CpPa04_RS00520 64f38c4c3c124c814ec740f1a7522ac6 488 Pfam PF04030 D-arabinono-1,4-lactone oxidase 423 484 2.7E-7 T 10-03-2017 IPR007173 D-arabinono-1,4-lactone oxidase GO:0003885|GO:0016020|GO:0055114 CpPa04_RS07330 3a205074738846e87fc3b881ff58bdb3 157 Pfam PF06271 RDD family 43 150 4.0E-6 T 10-03-2017 IPR010432 RDD CpPa04_RS07330 3a205074738846e87fc3b881ff58bdb3 157 PIRSF PIRSF021697 1 157 3.5E-59 T 10-03-2017 IPR016795 Uncharacterised conserved protein UCP021697, membrane CpPa04_RS08175 3367356337c28a3927f9fa62fd6bd6f7 556 SMART SM00382 346 556 6.6E-6 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS08175 3367356337c28a3927f9fa62fd6bd6f7 556 SMART SM00382 30 236 4.5E-11 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS08175 3367356337c28a3927f9fa62fd6bd6f7 556 Gene3D G3DSA:3.40.50.300 7 271 4.0E-55 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08175 3367356337c28a3927f9fa62fd6bd6f7 556 Gene3D G3DSA:3.40.50.300 319 535 1.2E-43 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08175 3367356337c28a3927f9fa62fd6bd6f7 556 ProSitePatterns PS00211 ABC transporters family signature. 443 457 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS08175 3367356337c28a3927f9fa62fd6bd6f7 556 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS08175 3367356337c28a3927f9fa62fd6bd6f7 556 SUPERFAMILY SSF52540 307 507 2.88E-45 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08175 3367356337c28a3927f9fa62fd6bd6f7 556 SUPERFAMILY SSF52540 8 241 2.21E-51 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08175 3367356337c28a3927f9fa62fd6bd6f7 556 Pfam PF00005 ABC transporter 21 188 3.6E-28 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS08175 3367356337c28a3927f9fa62fd6bd6f7 556 Pfam PF00005 ABC transporter 338 471 2.7E-22 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS08175 3367356337c28a3927f9fa62fd6bd6f7 556 Pfam PF12848 ABC transporter 227 302 2.6E-13 T 10-03-2017 IPR032781 ABC-transporter extension domain CpPa04_RS08175 3367356337c28a3927f9fa62fd6bd6f7 556 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 554 4.2E-263 T 10-03-2017 IPR022374 ABC transporter, ATP-binding protein, ChvD CpPa04_RS03160 93f52bd8dfd6c7bfd3d6cd9950177dcf 322 SUPERFAMILY SSF51197 56 292 1.6E-39 T 10-03-2017 CpPa04_RS03160 93f52bd8dfd6c7bfd3d6cd9950177dcf 322 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 21 291 2.9E-14 T 10-03-2017 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 CpPa04_RS03160 93f52bd8dfd6c7bfd3d6cd9950177dcf 322 Gene3D G3DSA:3.60.130.10 6 302 1.7E-42 T 10-03-2017 CpPa04_RS10475 a23856b802b5d4b7ab9fbdcba1a3e990 540 SUPERFAMILY SSF53850 56 525 1.99E-97 T 10-03-2017 CpPa04_RS10475 a23856b802b5d4b7ab9fbdcba1a3e990 540 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 103 453 7.2E-71 T 10-03-2017 IPR000914 Solute-binding protein family 5 domain CpPa04_RS10475 a23856b802b5d4b7ab9fbdcba1a3e990 540 Gene3D G3DSA:3.40.190.10 211 314 2.5E-23 T 10-03-2017 CpPa04_RS10475 a23856b802b5d4b7ab9fbdcba1a3e990 540 PIRSF PIRSF002741 11 521 3.4E-67 T 10-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CpPa04_RS10475 a23856b802b5d4b7ab9fbdcba1a3e990 540 Gene3D G3DSA:3.10.105.10 315 509 1.5E-29 T 10-03-2017 CpPa04_RS10475 a23856b802b5d4b7ab9fbdcba1a3e990 540 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 108 129 - T 10-03-2017 IPR023765 Solute-binding protein family 5, conserved site CpPa04_RS10475 a23856b802b5d4b7ab9fbdcba1a3e990 540 Gene3D G3DSA:3.90.76.10 71 210 3.1E-36 T 10-03-2017 CpPa04_RS01370 45252185f43b1cf290a8deedb6e682f8 293 SUPERFAMILY SSF52833 105 277 8.96E-36 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS01370 45252185f43b1cf290a8deedb6e682f8 293 Gene3D G3DSA:3.40.30.10 107 281 9.0E-40 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS01370 45252185f43b1cf290a8deedb6e682f8 293 Pfam PF13462 Thioredoxin 111 277 1.0E-28 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS09280 020ba3fd4977fa9438e68ba320655070 197 Gene3D G3DSA:3.90.45.10 4 190 3.2E-59 T 10-03-2017 IPR023635 Peptide deformylase CpPa04_RS09280 020ba3fd4977fa9438e68ba320655070 197 Pfam PF01327 Polypeptide deformylase 4 159 4.6E-41 T 10-03-2017 IPR023635 Peptide deformylase CpPa04_RS09280 020ba3fd4977fa9438e68ba320655070 197 PIRSF PIRSF004749 1 181 1.0E-39 T 10-03-2017 IPR023635 Peptide deformylase CpPa04_RS09280 020ba3fd4977fa9438e68ba320655070 197 Hamap MF_00163 Peptide deformylase [def]. 2 173 27.944 T 10-03-2017 IPR023635 Peptide deformylase CpPa04_RS09280 020ba3fd4977fa9438e68ba320655070 197 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 168 7.4E-35 T 10-03-2017 IPR023635 Peptide deformylase CpPa04_RS09280 020ba3fd4977fa9438e68ba320655070 197 PRINTS PR01576 Peptide deformylase signature 100 111 5.9E-30 T 10-03-2017 IPR023635 Peptide deformylase CpPa04_RS09280 020ba3fd4977fa9438e68ba320655070 197 PRINTS PR01576 Peptide deformylase signature 112 130 5.9E-30 T 10-03-2017 IPR023635 Peptide deformylase CpPa04_RS09280 020ba3fd4977fa9438e68ba320655070 197 PRINTS PR01576 Peptide deformylase signature 131 160 5.9E-30 T 10-03-2017 IPR023635 Peptide deformylase CpPa04_RS09280 020ba3fd4977fa9438e68ba320655070 197 PRINTS PR01576 Peptide deformylase signature 35 64 5.9E-30 T 10-03-2017 IPR023635 Peptide deformylase CpPa04_RS09280 020ba3fd4977fa9438e68ba320655070 197 SUPERFAMILY SSF56420 3 184 6.93E-51 T 10-03-2017 IPR023635 Peptide deformylase CpPa04_RS01240 5508a9ae14986855076c119c7305fe00 252 SUPERFAMILY SSF81343 29 242 8.24E-33 T 10-03-2017 CpPa04_RS01240 5508a9ae14986855076c119c7305fe00 252 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 132 228 1.2E-6 T 10-03-2017 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CpPa04_RS01240 5508a9ae14986855076c119c7305fe00 252 Gene3D G3DSA:1.20.950.10 22 235 9.7E-8 T 10-03-2017 CpPa04_RS01240 5508a9ae14986855076c119c7305fe00 252 TIGRFAM TIGR02046 sdhC_b558_fam: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 33 250 2.7E-44 T 10-03-2017 IPR011138 Succinate dehydrogenase cytochrome b558 subunit CpPa04_RS00130 2a56d6942354ed2867f0fa09386611cd 307 PIRSF PIRSF016632 1 307 9.2E-201 T 10-03-2017 IPR016674 Sphingomyelinase D/Phospholipase D GO:0004620|GO:0016042 CpPa04_RS00130 2a56d6942354ed2867f0fa09386611cd 307 Gene3D G3DSA:3.20.20.190 35 307 1.6E-39 T 10-03-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CpPa04_RS00130 2a56d6942354ed2867f0fa09386611cd 307 SUPERFAMILY SSF51695 41 269 1.67E-6 T 10-03-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CpPa04_RS09890 3d1865c727a588780a3fdfc9bb9a8f1e 891 Pfam PF03176 MMPL family 538 707 1.2E-20 T 10-03-2017 IPR004869 Membrane transport protein, MMPL domain GO:0016020 CpPa04_RS09890 3d1865c727a588780a3fdfc9bb9a8f1e 891 Pfam PF03176 MMPL family 46 363 1.2E-48 T 10-03-2017 IPR004869 Membrane transport protein, MMPL domain GO:0016020 CpPa04_RS09890 3d1865c727a588780a3fdfc9bb9a8f1e 891 SUPERFAMILY SSF82866 477 705 6.02E-25 T 10-03-2017 CpPa04_RS09890 3d1865c727a588780a3fdfc9bb9a8f1e 891 Gene3D G3DSA:1.20.1640.10 540 709 1.5E-25 T 10-03-2017 CpPa04_RS09890 3d1865c727a588780a3fdfc9bb9a8f1e 891 Gene3D G3DSA:1.20.1640.10 137 339 1.5E-30 T 10-03-2017 CpPa04_RS09890 3d1865c727a588780a3fdfc9bb9a8f1e 891 Gene3D G3DSA:1.20.1640.10 480 539 1.5E-4 T 10-03-2017 CpPa04_RS09890 3d1865c727a588780a3fdfc9bb9a8f1e 891 SUPERFAMILY SSF82866 131 337 1.06E-31 T 10-03-2017 CpPa04_RS01630 4e97703081dfc52c934b1eae37c69dc8 344 TIGRFAM TIGR03769 P_ac_wall_RPT: actinobacterial surface-anchored protein domain 218 258 9.3E-12 T 10-03-2017 IPR022435 Surface-anchored repeat, actinobacteria CpPa04_RS00645 e58154024dc52e1c10f548c54d9dc203 151 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 11 134 2.9E-46 T 10-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CpPa04_RS00645 e58154024dc52e1c10f548c54d9dc203 151 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 74 86 - T 10-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CpPa04_RS00645 e58154024dc52e1c10f548c54d9dc203 151 Gene3D G3DSA:2.70.70.10 5 146 1.2E-52 T 10-03-2017 CpPa04_RS00645 e58154024dc52e1c10f548c54d9dc203 151 SUPERFAMILY SSF51261 4 145 3.14E-46 T 10-03-2017 IPR011055 Duplicated hybrid motif CpPa04_RS00645 e58154024dc52e1c10f548c54d9dc203 151 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 12 132 2.0E-39 T 10-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CpPa04_RS02540 487c8de61845064fa88d5fd41da8addb 225 SUPERFAMILY SSF56801 2 212 1.11E-6 T 10-03-2017 CpPa04_RS02540 487c8de61845064fa88d5fd41da8addb 225 TIGRFAM TIGR03089 TIGR03089: TIGR03089 family protein 3 221 2.0E-61 T 10-03-2017 IPR017523 Conserved hypothetical protein CHP03089 CpPa04_RS08695 ad90994c665fb00b9c1fb78689286efc 501 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 333 466 7.9E-39 T 10-03-2017 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain CpPa04_RS08695 ad90994c665fb00b9c1fb78689286efc 501 Gene3D G3DSA:3.40.1080.10 10 225 2.0E-47 T 10-03-2017 CpPa04_RS08695 ad90994c665fb00b9c1fb78689286efc 501 SUPERFAMILY SSF100950 3 226 1.1E-67 T 10-03-2017 CpPa04_RS08695 ad90994c665fb00b9c1fb78689286efc 501 SUPERFAMILY SSF100950 229 499 6.85E-77 T 10-03-2017 CpPa04_RS08695 ad90994c665fb00b9c1fb78689286efc 501 Gene3D G3DSA:3.40.810.20 228 495 4.9E-69 T 10-03-2017 CpPa04_RS08695 ad90994c665fb00b9c1fb78689286efc 501 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 8 220 2.8E-32 T 10-03-2017 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 CpPa04_RS08695 ad90994c665fb00b9c1fb78689286efc 501 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 11 499 3.6E-227 T 10-03-2017 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 CpPa04_RS06470 3631025777c58defa4e1fc7f3beebac0 223 PRINTS PR01399 Enterobactin synthetase component D signature 156 172 1.8E-10 T 10-03-2017 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 CpPa04_RS06470 3631025777c58defa4e1fc7f3beebac0 223 PRINTS PR01399 Enterobactin synthetase component D signature 49 69 1.8E-10 T 10-03-2017 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 CpPa04_RS06470 3631025777c58defa4e1fc7f3beebac0 223 Gene3D G3DSA:3.90.470.20 127 196 6.2E-6 T 10-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CpPa04_RS06470 3631025777c58defa4e1fc7f3beebac0 223 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 115 219 1.1E-10 T 10-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CpPa04_RS06470 3631025777c58defa4e1fc7f3beebac0 223 SUPERFAMILY SSF56214 112 220 7.32E-16 T 10-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CpPa04_RS08990 ec65c169e91b8295aaa2cb905e436875 320 Gene3D G3DSA:2.60.40.1280 60 169 5.9E-15 T 10-03-2017 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 CpPa04_RS08990 ec65c169e91b8295aaa2cb905e436875 320 SUPERFAMILY SSF49401 67 179 3.35E-10 T 10-03-2017 IPR008966 Adhesion domain CpPa04_RS07475 0dd710c289db6057a7eefd423cc9461b 69 Gene3D G3DSA:1.10.1470.10 4 64 1.1E-14 T 10-03-2017 IPR008462 CsbD-like CpPa04_RS07475 0dd710c289db6057a7eefd423cc9461b 69 Pfam PF05532 CsbD-like 4 54 1.8E-14 T 10-03-2017 IPR008462 CsbD-like CpPa04_RS07475 0dd710c289db6057a7eefd423cc9461b 69 SUPERFAMILY SSF69047 4 62 8.37E-9 T 10-03-2017 IPR008462 CsbD-like CpPa04_RS02390 f0ab3d6ec79a9cedaadf39ba4e66d89c 288 Pfam PF00877 NlpC/P60 family 190 278 3.6E-23 T 10-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain CpPa04_RS02390 f0ab3d6ec79a9cedaadf39ba4e66d89c 288 SUPERFAMILY SSF54001 175 286 1.93E-33 T 10-03-2017 CpPa04_RS02390 f0ab3d6ec79a9cedaadf39ba4e66d89c 288 Gene3D G3DSA:3.90.1720.10 178 286 5.9E-36 T 10-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain CpPa04_RS10435 aa4538ad2856b7d21c71e9f38c136077 415 Gene3D G3DSA:3.30.565.10 319 410 1.9E-7 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS10435 aa4538ad2856b7d21c71e9f38c136077 415 PIRSF PIRSF037434 2 415 1.3E-112 T 10-03-2017 IPR017205 Signal transduction histidine kinase, ChrS CpPa04_RS10435 aa4538ad2856b7d21c71e9f38c136077 415 SUPERFAMILY SSF55874 274 408 1.31E-12 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS10435 aa4538ad2856b7d21c71e9f38c136077 415 Pfam PF07730 Histidine kinase 201 267 3.4E-15 T 10-03-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CpPa04_RS08485 ff6821771c6e56bf88236a45845a3e5e 77 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 72 1.7E-30 T 10-03-2017 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 CpPa04_RS08485 ff6821771c6e56bf88236a45845a3e5e 77 SUPERFAMILY SSF52833 1 71 1.49E-19 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS08485 ff6821771c6e56bf88236a45845a3e5e 77 Pfam PF00462 Glutaredoxin 3 61 1.1E-16 T 10-03-2017 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CpPa04_RS08485 ff6821771c6e56bf88236a45845a3e5e 77 Gene3D G3DSA:3.40.30.10 1 74 8.2E-28 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS06380 15132dcf9b94b19358e9398daa63d5ed 204 Pfam PF02361 Cobalt transport protein 14 201 7.7E-16 T 10-03-2017 IPR003339 ABC/ECF transporter, transmembrane component CpPa04_RS02665 6e6a7ded5930319fd15276394a50afd3 424 Pfam PF00487 Fatty acid desaturase 70 334 4.1E-31 T 10-03-2017 IPR005804 Fatty acid desaturase domain GO:0006629 CpPa04_RS07180 be5db6944d68341dabbbf4880dacf9bc 167 Hamap MF_00977 3'-5' exoribonuclease. 1 159 44.619 T 10-03-2017 IPR030853 3-5 exoribonuclease, actinobacteria GO:0000287|GO:0008408 CpPa04_RS07180 be5db6944d68341dabbbf4880dacf9bc 167 Pfam PF16473 3' exoribonuclease, RNase T-like 1 155 3.6E-19 T 10-03-2017 IPR033390 3'-5' exoribonuclease Rv2179c-like domain CpPa04_RS01205 f5283baed3871208d54983e74c7ac08b 334 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 5 321 6.9E-134 T 10-03-2017 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 CpPa04_RS01205 f5283baed3871208d54983e74c7ac08b 334 Gene3D G3DSA:3.40.50.720 3 179 5.8E-59 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS01205 f5283baed3871208d54983e74c7ac08b 334 Gene3D G3DSA:3.90.25.10 180 325 9.3E-46 T 10-03-2017 CpPa04_RS01205 f5283baed3871208d54983e74c7ac08b 334 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 294 1.9E-73 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS01205 f5283baed3871208d54983e74c7ac08b 334 SUPERFAMILY SSF51735 3 326 1.52E-90 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS00090 2cfa9afec31126b01712b5d927810dd1 361 Pfam PF02653 Branched-chain amino acid transport system / permease component 71 347 2.1E-52 T 10-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CpPa04_RS05495 e6c9251f15815ed1042f83589e878199 239 Gene3D G3DSA:3.40.50.880 48 215 3.2E-23 T 10-03-2017 IPR029062 Class I glutamine amidotransferase-like CpPa04_RS05495 e6c9251f15815ed1042f83589e878199 239 Pfam PF00117 Glutamine amidotransferase class-I 46 195 9.1E-9 T 10-03-2017 IPR017926 Glutamine amidotransferase CpPa04_RS05495 e6c9251f15815ed1042f83589e878199 239 SUPERFAMILY SSF52317 22 237 1.0E-34 T 10-03-2017 IPR029062 Class I glutamine amidotransferase-like CpPa04_RS03425 bfabfb17a8a077fd127972ff2cad8598 577 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 171 340 2.0E-16 T 10-03-2017 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 CpPa04_RS03425 bfabfb17a8a077fd127972ff2cad8598 577 Pfam PF16192 C-terminal four TMM region of protein-O-mannosyltransferase 379 576 5.2E-21 T 10-03-2017 IPR032421 Protein O-mannosyl-transferase, C-terminal four TM domain KEGG: 00500+2.4.1.10|KEGG: 00514+2.4.1.109|MetaCyc: PWY-822|Reactome: R-HSA-5173105 CpPa04_RS07990 5d09dc5e75c1230ac145153f432d038e 155 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 12 108 8.3E-28 T 10-03-2017 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CpPa04_RS07990 5d09dc5e75c1230ac145153f432d038e 155 Gene3D G3DSA:3.30.460.10 9 112 1.7E-30 T 10-03-2017 CpPa04_RS07990 5d09dc5e75c1230ac145153f432d038e 155 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 4 109 21.208 T 10-03-2017 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CpPa04_RS07990 5d09dc5e75c1230ac145153f432d038e 155 SUPERFAMILY SSF81301 7 119 2.13E-33 T 10-03-2017 CpPa04_RS07990 5d09dc5e75c1230ac145153f432d038e 155 Pfam PF02410 Ribosomal silencing factor during starvation 15 108 6.3E-21 T 10-03-2017 CpPa04_RS03735 1da7df0f032fcd45248968a2a3011f24 186 Pfam PF00583 Acetyltransferase (GNAT) family 60 140 1.9E-11 T 10-03-2017 IPR000182 GNAT domain GO:0008080 CpPa04_RS03735 1da7df0f032fcd45248968a2a3011f24 186 Gene3D G3DSA:3.40.630.30 6 172 1.6E-31 T 10-03-2017 IPR016181 Acyl-CoA N-acyltransferase CpPa04_RS03735 1da7df0f032fcd45248968a2a3011f24 186 SUPERFAMILY SSF55729 2 171 1.73E-26 T 10-03-2017 IPR016181 Acyl-CoA N-acyltransferase CpPa04_RS10695 257dc43a2e74332cc12a92bc62fabbfc 318 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 31 280 3.7E-57 T 10-03-2017 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CpPa04_RS10695 257dc43a2e74332cc12a92bc62fabbfc 318 Pfam PF02096 60Kd inner membrane protein 32 279 6.7E-50 T 10-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CpPa04_RS00180 1fcaa7263caf0db79485dcc3ef19ad82 503 SMART SM00331 10 234 1.4E-38 T 10-03-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CpPa04_RS00180 1fcaa7263caf0db79485dcc3ef19ad82 503 Pfam PF13672 Protein phosphatase 2C 25 195 5.3E-10 T 10-03-2017 CpPa04_RS00180 1fcaa7263caf0db79485dcc3ef19ad82 503 SMART SM00332 1 232 2.8E-27 T 10-03-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CpPa04_RS00180 1fcaa7263caf0db79485dcc3ef19ad82 503 SUPERFAMILY SSF81606 3 233 2.62E-61 T 10-03-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CpPa04_RS00180 1fcaa7263caf0db79485dcc3ef19ad82 503 Gene3D G3DSA:3.60.40.10 2 234 1.4E-64 T 10-03-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CpPa04_RS07215 f960e73de008522dab1106296afe0134 540 Gene3D G3DSA:1.20.810.10 12 430 1.0E-85 T 10-03-2017 IPR027387 Cytochrome b/b6-like domain Reactome: R-HSA-611105 CpPa04_RS07215 f960e73de008522dab1106296afe0134 540 Pfam PF13631 Cytochrome b(N-terminal)/b6/petB 111 284 9.7E-61 T 10-03-2017 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 CpPa04_RS07215 f960e73de008522dab1106296afe0134 540 SUPERFAMILY SSF81342 11 290 4.08E-62 T 10-03-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CpPa04_RS05915 acbb4aba98e98b268243579791be96ea 165 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 10-03-2017 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 CpPa04_RS05915 acbb4aba98e98b268243579791be96ea 165 SUPERFAMILY SSF52833 1 162 7.08E-36 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS05915 acbb4aba98e98b268243579791be96ea 165 Gene3D G3DSA:3.40.30.10 4 164 1.8E-39 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS05915 acbb4aba98e98b268243579791be96ea 165 Pfam PF08534 Redoxin 20 161 7.1E-18 T 10-03-2017 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CpPa04_RS05915 acbb4aba98e98b268243579791be96ea 165 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 165 35.002 T 10-03-2017 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 CpPa04_RS10010 6fbd81e7669352bb6b832818c7192778 337 SUPERFAMILY SSF53807 61 318 4.32E-51 T 10-03-2017 CpPa04_RS10010 6fbd81e7669352bb6b832818c7192778 337 Gene3D G3DSA:3.40.50.1980 203 319 1.1E-22 T 10-03-2017 CpPa04_RS10010 6fbd81e7669352bb6b832818c7192778 337 Pfam PF01497 Periplasmic binding protein 74 299 1.1E-30 T 10-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CpPa04_RS10010 6fbd81e7669352bb6b832818c7192778 337 Gene3D G3DSA:3.40.50.1980 70 187 1.1E-23 T 10-03-2017 CpPa04_RS02855 ebb17a349dabc60bfe4dd1081858d662 455 Pfam PF07786 Protein of unknown function (DUF1624) 67 265 5.2E-10 T 10-03-2017 IPR012429 Protein of unknown function DUF1624 KEGG: 00531+2.3.1.78|Reactome: R-HSA-2024096|Reactome: R-HSA-2206291 CpPa04_RS06455 9d9a549c0c9fc73a680da5ca702fd3fe 321 Gene3D G3DSA:3.90.245.10 2 312 2.9E-103 T 10-03-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CpPa04_RS06455 9d9a549c0c9fc73a680da5ca702fd3fe 321 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 304 9.0E-68 T 10-03-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CpPa04_RS06455 9d9a549c0c9fc73a680da5ca702fd3fe 321 SUPERFAMILY SSF53590 3 312 3.14E-87 T 10-03-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CpPa04_RS08880 90d85deeb8891e2d11222815525946ce 177 SUPERFAMILY SSF46689 3 70 2.41E-10 T 10-03-2017 IPR009057 Homeodomain-like GO:0003677 CpPa04_RS08880 90d85deeb8891e2d11222815525946ce 177 Gene3D G3DSA:1.10.357.10 2 169 9.7E-20 T 10-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CpPa04_RS08880 90d85deeb8891e2d11222815525946ce 177 SUPERFAMILY SSF48498 80 162 7.56E-15 T 10-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CpPa04_RS08880 90d85deeb8891e2d11222815525946ce 177 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 54 1.1E-4 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS05840 c7e262b4364b83a172ba78f2ad2247a4 445 SMART SM00382 60 195 9.3E-10 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS05840 c7e262b4364b83a172ba78f2ad2247a4 445 Pfam PF16193 AAA C-terminal domain 198 272 4.6E-26 T 10-03-2017 IPR032423 AAA ATPase, C-terminal domain CpPa04_RS05840 c7e262b4364b83a172ba78f2ad2247a4 445 Gene3D G3DSA:1.10.8.60 181 246 3.3E-10 T 10-03-2017 CpPa04_RS05840 c7e262b4364b83a172ba78f2ad2247a4 445 Gene3D G3DSA:1.20.272.10 254 352 7.1E-47 T 10-03-2017 CpPa04_RS05840 c7e262b4364b83a172ba78f2ad2247a4 445 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 64 167 5.9E-15 T 10-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 CpPa04_RS05840 c7e262b4364b83a172ba78f2ad2247a4 445 Gene3D G3DSA:1.10.3710.10 354 441 1.2E-26 T 10-03-2017 CpPa04_RS05840 c7e262b4364b83a172ba78f2ad2247a4 445 SUPERFAMILY SSF52540 24 249 2.85E-40 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05840 c7e262b4364b83a172ba78f2ad2247a4 445 Pfam PF12002 MgsA AAA+ ATPase C terminal 273 437 1.4E-70 T 10-03-2017 IPR021886 MgsA AAA+ ATPase C-terminal CpPa04_RS05840 c7e262b4364b83a172ba78f2ad2247a4 445 SUPERFAMILY SSF48019 258 441 1.02E-74 T 10-03-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CpPa04_RS05840 c7e262b4364b83a172ba78f2ad2247a4 445 Gene3D G3DSA:3.40.50.300 25 175 2.6E-29 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02035 0821900430cde35188240a293a7499d9 392 TIGRFAM TIGR03921 T7SS_mycosin: type VII secretion-associated serine protease mycosin 53 387 4.2E-87 T 10-03-2017 IPR023834 Type VII secretion system peptidase S8A, mycosin-1 CpPa04_RS02035 0821900430cde35188240a293a7499d9 392 PRINTS PR00723 Subtilisin serine protease family (S8) signature 102 115 4.3E-13 T 10-03-2017 IPR015500 Peptidase S8, subtilisin-related CpPa04_RS02035 0821900430cde35188240a293a7499d9 392 PRINTS PR00723 Subtilisin serine protease family (S8) signature 63 82 4.3E-13 T 10-03-2017 IPR015500 Peptidase S8, subtilisin-related CpPa04_RS02035 0821900430cde35188240a293a7499d9 392 PRINTS PR00723 Subtilisin serine protease family (S8) signature 288 304 4.3E-13 T 10-03-2017 IPR015500 Peptidase S8, subtilisin-related CpPa04_RS02035 0821900430cde35188240a293a7499d9 392 Pfam PF00082 Subtilase family 63 327 1.5E-29 T 10-03-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CpPa04_RS02035 0821900430cde35188240a293a7499d9 392 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 68 78 - T 10-03-2017 IPR023827 Peptidase S8, subtilisin, Asp-active site CpPa04_RS02035 0821900430cde35188240a293a7499d9 392 SUPERFAMILY SSF52743 54 336 1.96E-53 T 10-03-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CpPa04_RS02035 0821900430cde35188240a293a7499d9 392 Gene3D G3DSA:3.40.50.200 53 337 6.5E-56 T 10-03-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CpPa04_RS02035 0821900430cde35188240a293a7499d9 392 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 289 299 - T 10-03-2017 IPR023828 Peptidase S8, subtilisin, Ser-active site CpPa04_RS02230 f1885c21984c001ada4f9363c4484cb8 285 Gene3D G3DSA:3.40.190.10 32 156 7.9E-40 T 10-03-2017 CpPa04_RS02230 f1885c21984c001ada4f9363c4484cb8 285 Pfam PF03180 NLPA lipoprotein 32 266 1.6E-58 T 10-03-2017 IPR004872 Lipoprotein NlpA family CpPa04_RS02230 f1885c21984c001ada4f9363c4484cb8 285 SUPERFAMILY SSF53850 32 280 8.84E-66 T 10-03-2017 CpPa04_RS08265 b0fb7c7bb3e2bf1388b9d315c6f4f5b7 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 4.4E-7 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS08265 b0fb7c7bb3e2bf1388b9d315c6f4f5b7 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 4.4E-7 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS08265 b0fb7c7bb3e2bf1388b9d315c6f4f5b7 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 4.4E-7 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS08265 b0fb7c7bb3e2bf1388b9d315c6f4f5b7 267 Gene3D G3DSA:3.40.50.720 11 227 5.0E-57 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS08265 b0fb7c7bb3e2bf1388b9d315c6f4f5b7 267 Pfam PF00106 short chain dehydrogenase 12 191 1.0E-43 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS08265 b0fb7c7bb3e2bf1388b9d315c6f4f5b7 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 6.9E-20 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS08265 b0fb7c7bb3e2bf1388b9d315c6f4f5b7 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 6.9E-20 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS08265 b0fb7c7bb3e2bf1388b9d315c6f4f5b7 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 6.9E-20 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS08265 b0fb7c7bb3e2bf1388b9d315c6f4f5b7 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 6.9E-20 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS08265 b0fb7c7bb3e2bf1388b9d315c6f4f5b7 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 6.9E-20 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS08265 b0fb7c7bb3e2bf1388b9d315c6f4f5b7 267 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 193 3.3E-4 T 10-03-2017 CpPa04_RS08265 b0fb7c7bb3e2bf1388b9d315c6f4f5b7 267 PIRSF PIRSF000126 3 266 1.8E-73 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS08265 b0fb7c7bb3e2bf1388b9d315c6f4f5b7 267 SUPERFAMILY SSF51735 11 262 1.1E-57 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS04780 20a107bc9814440912b1af0a8a9524a2 954 Gene3D G3DSA:3.40.50.300 830 948 1.1E-58 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04780 20a107bc9814440912b1af0a8a9524a2 954 Gene3D G3DSA:3.40.50.300 4 52 8.2E-55 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04780 20a107bc9814440912b1af0a8a9524a2 954 Gene3D G3DSA:3.40.50.300 621 682 1.1E-58 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04780 20a107bc9814440912b1af0a8a9524a2 954 Gene3D G3DSA:3.40.50.300 488 605 8.2E-55 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04780 20a107bc9814440912b1af0a8a9524a2 954 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 934 0.0 T 10-03-2017 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 CpPa04_RS04780 20a107bc9814440912b1af0a8a9524a2 954 Gene3D G3DSA:1.10.8.280 292 411 1.1E-27 T 10-03-2017 CpPa04_RS04780 20a107bc9814440912b1af0a8a9524a2 954 Hamap MF_00205 UvrABC system protein A [uvrA]. 2 949 22.247 T 10-03-2017 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 CpPa04_RS04780 20a107bc9814440912b1af0a8a9524a2 954 SUPERFAMILY SSF52540 626 923 5.79E-51 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04780 20a107bc9814440912b1af0a8a9524a2 954 ProSitePatterns PS00211 ABC transporters family signature. 497 511 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS04780 20a107bc9814440912b1af0a8a9524a2 954 SUPERFAMILY SSF52540 10 205 1.25E-43 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04780 20a107bc9814440912b1af0a8a9524a2 954 SUPERFAMILY SSF52540 440 579 1.25E-43 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04780 20a107bc9814440912b1af0a8a9524a2 954 Gene3D G3DSA:3.30.1490.20 201 239 7.6E-25 T 10-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CpPa04_RS04780 20a107bc9814440912b1af0a8a9524a2 954 Gene3D G3DSA:3.30.1490.20 131 154 7.6E-25 T 10-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CpPa04_RS04780 20a107bc9814440912b1af0a8a9524a2 954 Pfam PF00005 ABC transporter 633 869 8.5E-12 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS04780 20a107bc9814440912b1af0a8a9524a2 954 Gene3D G3DSA:1.20.1580.10 255 289 3.8E-49 T 10-03-2017 CpPa04_RS04780 20a107bc9814440912b1af0a8a9524a2 954 Gene3D G3DSA:1.20.1580.10 92 130 3.8E-49 T 10-03-2017 CpPa04_RS04780 20a107bc9814440912b1af0a8a9524a2 954 Gene3D G3DSA:1.20.1580.10 412 487 3.8E-49 T 10-03-2017 CpPa04_RS04780 20a107bc9814440912b1af0a8a9524a2 954 ProSitePatterns PS00211 ABC transporters family signature. 839 853 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS04780 20a107bc9814440912b1af0a8a9524a2 954 Gene3D G3DSA:1.20.1580.10 703 829 3.3E-56 T 10-03-2017 CpPa04_RS10525 d027afb6339bd6621af80905b3814013 212 SUPERFAMILY SSF53649 103 178 7.41E-8 T 10-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CpPa04_RS10525 d027afb6339bd6621af80905b3814013 212 Gene3D G3DSA:3.40.720.10 104 175 3.5E-7 T 10-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CpPa04_RS09060 9f60a0642d10731cc9946c5ee5f6c606 314 SUPERFAMILY SSF117892 114 248 2.48E-13 T 10-03-2017 IPR001107 Band 7 domain CpPa04_RS09060 9f60a0642d10731cc9946c5ee5f6c606 314 Pfam PF01145 SPFH domain / Band 7 family 86 257 2.4E-26 T 10-03-2017 IPR001107 Band 7 domain CpPa04_RS09060 9f60a0642d10731cc9946c5ee5f6c606 314 SMART SM00244 82 246 1.4E-7 T 10-03-2017 IPR001107 Band 7 domain CpPa04_RS00235 52ffb147683316ca587f295f99f1f3b7 532 SMART SM00642 22 396 1.1E-70 T 10-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CpPa04_RS00235 52ffb147683316ca587f295f99f1f3b7 532 Pfam PF00128 Alpha amylase, catalytic domain 37 375 1.6E-67 T 10-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CpPa04_RS00235 52ffb147683316ca587f295f99f1f3b7 532 Gene3D G3DSA:3.20.20.80 11 112 1.3E-91 T 10-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CpPa04_RS00235 52ffb147683316ca587f295f99f1f3b7 532 Gene3D G3DSA:3.20.20.80 193 455 1.3E-91 T 10-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CpPa04_RS00235 52ffb147683316ca587f295f99f1f3b7 532 SUPERFAMILY SSF51445 11 454 4.77E-95 T 10-03-2017 IPR017853 Glycoside hydrolase superfamily CpPa04_RS00235 52ffb147683316ca587f295f99f1f3b7 532 SUPERFAMILY SSF51011 459 529 3.81E-5 T 10-03-2017 CpPa04_RS00235 52ffb147683316ca587f295f99f1f3b7 532 Pfam PF11941 Domain of unknown function (DUF3459) 441 528 3.9E-8 T 10-03-2017 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) CpPa04_RS00235 52ffb147683316ca587f295f99f1f3b7 532 Gene3D G3DSA:2.60.40.1180 459 529 1.7E-4 T 10-03-2017 IPR013780 Glycosyl hydrolase, all-beta CpPa04_RS00235 52ffb147683316ca587f295f99f1f3b7 532 Gene3D G3DSA:3.90.400.10 113 173 3.4E-12 T 10-03-2017 CpPa04_RS09650 99f144a4b2ce04d98b9e456d8c0cd98b 214 Gene3D G3DSA:3.90.20.20 67 153 7.0E-19 T 10-03-2017 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 CpPa04_RS09650 99f144a4b2ce04d98b9e456d8c0cd98b 214 PRINTS PR00773 GrpE protein signature 86 102 1.6E-20 T 10-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CpPa04_RS09650 99f144a4b2ce04d98b9e456d8c0cd98b 214 PRINTS PR00773 GrpE protein signature 114 129 1.6E-20 T 10-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CpPa04_RS09650 99f144a4b2ce04d98b9e456d8c0cd98b 214 PRINTS PR00773 GrpE protein signature 162 177 1.6E-20 T 10-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CpPa04_RS09650 99f144a4b2ce04d98b9e456d8c0cd98b 214 PRINTS PR00773 GrpE protein signature 187 206 1.6E-20 T 10-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CpPa04_RS09650 99f144a4b2ce04d98b9e456d8c0cd98b 214 SUPERFAMILY SSF58014 71 152 4.45E-17 T 10-03-2017 CpPa04_RS09650 99f144a4b2ce04d98b9e456d8c0cd98b 214 Hamap MF_01151 Protein GrpE [grpE]. 17 208 15.874 T 10-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CpPa04_RS09650 99f144a4b2ce04d98b9e456d8c0cd98b 214 Gene3D G3DSA:2.30.22.10 155 209 1.9E-15 T 10-03-2017 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CpPa04_RS09650 99f144a4b2ce04d98b9e456d8c0cd98b 214 ProSitePatterns PS01071 grpE protein signature. 165 206 - T 10-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CpPa04_RS09650 99f144a4b2ce04d98b9e456d8c0cd98b 214 Pfam PF01025 GrpE 55 207 1.3E-26 T 10-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CpPa04_RS09650 99f144a4b2ce04d98b9e456d8c0cd98b 214 SUPERFAMILY SSF51064 155 208 4.18E-11 T 10-03-2017 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CpPa04_RS07145 a6df60cf75242e901acbc07c5414adb5 202 SUPERFAMILY SSF55729 42 178 5.23E-11 T 10-03-2017 IPR016181 Acyl-CoA N-acyltransferase CpPa04_RS07145 a6df60cf75242e901acbc07c5414adb5 202 Gene3D G3DSA:3.40.630.30 17 177 4.1E-12 T 10-03-2017 IPR016181 Acyl-CoA N-acyltransferase CpPa04_RS07145 a6df60cf75242e901acbc07c5414adb5 202 Pfam PF13508 Acetyltransferase (GNAT) domain 104 169 2.6E-6 T 10-03-2017 IPR000182 GNAT domain GO:0008080 CpPa04_RS03035 92b10a9d36794feb63133a724ade9380 130 PRINTS PR00050 Cold shock protein signature 38 56 7.5E-5 T 10-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CpPa04_RS03035 92b10a9d36794feb63133a724ade9380 130 PRINTS PR00050 Cold shock protein signature 4 19 7.5E-5 T 10-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CpPa04_RS03035 92b10a9d36794feb63133a724ade9380 130 Pfam PF00313 'Cold-shock' DNA-binding domain 4 62 2.9E-8 T 10-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CpPa04_RS03035 92b10a9d36794feb63133a724ade9380 130 Gene3D G3DSA:2.40.50.140 4 64 7.8E-15 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS03035 92b10a9d36794feb63133a724ade9380 130 SUPERFAMILY SSF50249 3 65 6.37E-12 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS03035 92b10a9d36794feb63133a724ade9380 130 SMART SM00357 3 65 8.1E-8 T 10-03-2017 IPR011129 Cold shock protein GO:0003676 CpPa04_RS04910 13775d3650786f0d28a05e1c4ef84bab 582 Gene3D G3DSA:3.40.50.300 1 214 1.5E-48 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04910 13775d3650786f0d28a05e1c4ef84bab 582 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 524 4.6E-12 T 10-03-2017 IPR003395 RecF/RecN/SMC, N-terminal CpPa04_RS04910 13775d3650786f0d28a05e1c4ef84bab 582 PIRSF PIRSF003128 1 573 6.0E-154 T 10-03-2017 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CpPa04_RS04910 13775d3650786f0d28a05e1c4ef84bab 582 Gene3D G3DSA:3.40.50.300 343 389 2.9E-9 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04910 13775d3650786f0d28a05e1c4ef84bab 582 Gene3D G3DSA:3.40.50.300 447 524 2.9E-9 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04910 13775d3650786f0d28a05e1c4ef84bab 582 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 568 3.1E-168 T 10-03-2017 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CpPa04_RS04910 13775d3650786f0d28a05e1c4ef84bab 582 SUPERFAMILY SSF52540 362 524 1.36E-47 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04910 13775d3650786f0d28a05e1c4ef84bab 582 SUPERFAMILY SSF52540 305 333 1.36E-47 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04910 13775d3650786f0d28a05e1c4ef84bab 582 SUPERFAMILY SSF52540 1 207 1.36E-47 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06985 80d35931f7ae2db6990225c135ecc011 1186 SMART SM00481 8 75 1.7E-28 T 10-03-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 CpPa04_RS06985 80d35931f7ae2db6990225c135ecc011 1186 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 319 762 2.7E-154 T 10-03-2017 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CpPa04_RS06985 80d35931f7ae2db6990225c135ecc011 1186 Pfam PF02811 PHP domain 9 195 2.1E-42 T 10-03-2017 IPR004013 PHP domain GO:0003824 CpPa04_RS06985 80d35931f7ae2db6990225c135ecc011 1186 SUPERFAMILY SSF89550 7 93 5.49E-26 T 10-03-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CpPa04_RS06985 80d35931f7ae2db6990225c135ecc011 1186 SUPERFAMILY SSF89550 121 271 5.49E-26 T 10-03-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CpPa04_RS06985 80d35931f7ae2db6990225c135ecc011 1186 Gene3D G3DSA:3.20.20.140 7 271 1.1E-37 T 10-03-2017 CpPa04_RS06985 80d35931f7ae2db6990225c135ecc011 1186 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 7 1063 0.0 T 10-03-2017 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CpPa04_RS06985 80d35931f7ae2db6990225c135ecc011 1186 Pfam PF14579 Helix-hairpin-helix motif 835 922 4.1E-24 T 10-03-2017 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CpPa04_RS07005 34d163df82d042187c36cf36d7faeaf6 163 ProSitePatterns PS00855 Signal peptidases II signature. 88 100 - T 10-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CpPa04_RS07005 34d163df82d042187c36cf36d7faeaf6 163 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 148 14.097 T 10-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CpPa04_RS07005 34d163df82d042187c36cf36d7faeaf6 163 Pfam PF01252 Signal peptidase (SPase) II 4 142 2.4E-32 T 10-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CpPa04_RS07005 34d163df82d042187c36cf36d7faeaf6 163 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 85 100 1.3E-15 T 10-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CpPa04_RS07005 34d163df82d042187c36cf36d7faeaf6 163 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 43 51 1.3E-15 T 10-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CpPa04_RS07005 34d163df82d042187c36cf36d7faeaf6 163 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 123 139 1.3E-15 T 10-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CpPa04_RS07005 34d163df82d042187c36cf36d7faeaf6 163 TIGRFAM TIGR00077 lspA: signal peptidase II 4 150 5.8E-27 T 10-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CpPa04_RS03740 f125c0afafb02c035a542457df9fe89d 524 ProSitePatterns PS00217 Sugar transport proteins signature 2. 116 141 - T 10-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CpPa04_RS03740 f125c0afafb02c035a542457df9fe89d 524 SUPERFAMILY SSF103473 483 519 2.09E-66 T 10-03-2017 IPR020846 Major facilitator superfamily domain CpPa04_RS03740 f125c0afafb02c035a542457df9fe89d 524 SUPERFAMILY SSF103473 15 207 2.09E-66 T 10-03-2017 IPR020846 Major facilitator superfamily domain CpPa04_RS03740 f125c0afafb02c035a542457df9fe89d 524 SUPERFAMILY SSF103473 256 427 2.09E-66 T 10-03-2017 IPR020846 Major facilitator superfamily domain CpPa04_RS03740 f125c0afafb02c035a542457df9fe89d 524 Pfam PF07690 Major Facilitator Superfamily 25 418 2.4E-53 T 10-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CpPa04_RS03740 f125c0afafb02c035a542457df9fe89d 524 PRINTS PR01036 Tetracycline resistance protein TetB signature 144 168 4.0E-8 T 10-03-2017 CpPa04_RS03740 f125c0afafb02c035a542457df9fe89d 524 PRINTS PR01036 Tetracycline resistance protein TetB signature 346 366 4.0E-8 T 10-03-2017 CpPa04_RS03740 f125c0afafb02c035a542457df9fe89d 524 PRINTS PR01036 Tetracycline resistance protein TetB signature 114 134 4.0E-8 T 10-03-2017 CpPa04_RS03740 f125c0afafb02c035a542457df9fe89d 524 PRINTS PR01036 Tetracycline resistance protein TetB signature 24 48 4.0E-8 T 10-03-2017 CpPa04_RS03740 f125c0afafb02c035a542457df9fe89d 524 Gene3D G3DSA:1.20.1250.20 20 199 8.1E-32 T 10-03-2017 CpPa04_RS03740 f125c0afafb02c035a542457df9fe89d 524 Gene3D G3DSA:1.20.1250.20 490 518 2.3E-23 T 10-03-2017 CpPa04_RS03740 f125c0afafb02c035a542457df9fe89d 524 Gene3D G3DSA:1.20.1250.20 270 433 2.3E-23 T 10-03-2017 CpPa04_RS03740 f125c0afafb02c035a542457df9fe89d 524 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 22 435 7.8E-69 T 10-03-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 CpPa04_RS04730 174192059c199f74ab6a7356a8ed3f6e 262 Gene3D G3DSA:3.40.50.150 25 241 6.6E-33 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS04730 174192059c199f74ab6a7356a8ed3f6e 262 Pfam PF08241 Methyltransferase domain 69 162 2.3E-18 T 10-03-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CpPa04_RS04730 174192059c199f74ab6a7356a8ed3f6e 262 SUPERFAMILY SSF53335 19 261 1.53E-36 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS09020 3b459a75319749dd130217c4bf5df874 56 Pfam PF14020 Protein of unknown function (DUF4236) 4 52 2.8E-10 T 10-03-2017 IPR025330 Domain of unknown function DUF4236 CpPa04_RS01690 c5a8b9b503f9e8d09d7b89b6889be10d 241 TIGRFAM TIGR03943 TIGR03943: TIGR03943 family protein 33 240 2.4E-35 T 10-03-2017 IPR015402 Protein of unknown function DUF1980 CpPa04_RS03255 39b2554b65ec92ee31cb4e49094aa724 495 Gene3D G3DSA:3.40.309.10 278 466 1.8E-61 T 10-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CpPa04_RS03255 39b2554b65ec92ee31cb4e49094aa724 495 SUPERFAMILY SSF53720 15 493 8.9E-157 T 10-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CpPa04_RS03255 39b2554b65ec92ee31cb4e49094aa724 495 Gene3D G3DSA:3.40.605.10 20 277 1.6E-90 T 10-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CpPa04_RS03255 39b2554b65ec92ee31cb4e49094aa724 495 Pfam PF00171 Aldehyde dehydrogenase family 30 490 3.0E-156 T 10-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CpPa04_RS03255 39b2554b65ec92ee31cb4e49094aa724 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 10-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CpPa04_RS03820 31b01e866b07f576f6752c590b46deb6 774 SUPERFAMILY SSF52540 7 54 9.37E-33 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03820 31b01e866b07f576f6752c590b46deb6 774 SUPERFAMILY SSF52540 293 438 9.37E-33 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03820 31b01e866b07f576f6752c590b46deb6 774 Gene3D G3DSA:1.10.8.280 169 280 2.7E-10 T 10-03-2017 CpPa04_RS03820 31b01e866b07f576f6752c590b46deb6 774 SMART SM00382 25 433 3.6 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS03820 31b01e866b07f576f6752c590b46deb6 774 SMART SM00382 496 741 0.2 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS03820 31b01e866b07f576f6752c590b46deb6 774 Gene3D G3DSA:3.40.50.300 347 462 5.9E-49 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03820 31b01e866b07f576f6752c590b46deb6 774 Gene3D G3DSA:3.40.50.300 469 530 3.6E-54 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03820 31b01e866b07f576f6752c590b46deb6 774 Gene3D G3DSA:3.40.50.300 6 53 5.9E-49 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03820 31b01e866b07f576f6752c590b46deb6 774 Gene3D G3DSA:3.40.50.300 657 772 3.6E-54 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03820 31b01e866b07f576f6752c590b46deb6 774 SUPERFAMILY SSF52540 485 767 1.24E-37 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03820 31b01e866b07f576f6752c590b46deb6 774 Gene3D G3DSA:1.20.1580.10 534 656 8.3E-33 T 10-03-2017 CpPa04_RS03820 31b01e866b07f576f6752c590b46deb6 774 Pfam PF00005 ABC transporter 487 693 4.0E-12 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS03820 31b01e866b07f576f6752c590b46deb6 774 Gene3D G3DSA:1.20.1580.10 281 346 1.9E-37 T 10-03-2017 CpPa04_RS03820 31b01e866b07f576f6752c590b46deb6 774 Gene3D G3DSA:1.20.1580.10 94 167 1.9E-37 T 10-03-2017 CpPa04_RS01080 5ecf4586de257c7344d454fe5a1f5c4d 399 SUPERFAMILY SSF50494 194 382 8.66E-34 T 10-03-2017 IPR009003 Peptidase S1, PA clan CpPa04_RS01080 5ecf4586de257c7344d454fe5a1f5c4d 399 Gene3D G3DSA:2.40.10.10 278 383 1.7E-14 T 10-03-2017 CpPa04_RS01080 5ecf4586de257c7344d454fe5a1f5c4d 399 Pfam PF02674 Colicin V production protein 7 147 1.4E-15 T 10-03-2017 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 CpPa04_RS01080 5ecf4586de257c7344d454fe5a1f5c4d 399 Gene3D G3DSA:2.40.10.10 194 277 3.2E-16 T 10-03-2017 CpPa04_RS01080 5ecf4586de257c7344d454fe5a1f5c4d 399 Pfam PF13365 Trypsin-like peptidase domain 220 356 9.6E-21 T 10-03-2017 CpPa04_RS00595 5ec40b3273b8cf3c1e2eb165524c6a66 397 Gene3D G3DSA:3.40.640.10 73 235 2.4E-17 T 10-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CpPa04_RS00595 5ec40b3273b8cf3c1e2eb165524c6a66 397 Pfam PF00266 Aminotransferase class-V 132 217 3.8E-11 T 10-03-2017 IPR000192 Aminotransferase class V domain CpPa04_RS00595 5ec40b3273b8cf3c1e2eb165524c6a66 397 SUPERFAMILY SSF53383 4 395 3.41E-33 T 10-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase CpPa04_RS00595 5ec40b3273b8cf3c1e2eb165524c6a66 397 Gene3D G3DSA:3.90.1150.10 253 396 1.2E-13 T 10-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CpPa04_RS08380 50aa2ad28046d4283516ac182894eeef 119 Pfam PF12823 Domain of unknown function (DUF3817) 19 107 6.1E-26 T 10-03-2017 IPR023845 Domain of unknown function DUF3817, transmembrane CpPa04_RS08380 50aa2ad28046d4283516ac182894eeef 119 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 22 106 1.6E-26 T 10-03-2017 IPR023845 Domain of unknown function DUF3817, transmembrane CpPa04_RS05275 d954e2e129a070fd9ecb454123a6616d 510 PIRSF PIRSF018077 7 495 5.9E-171 T 10-03-2017 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 CpPa04_RS05275 d954e2e129a070fd9ecb454123a6616d 510 TIGRFAM TIGR03688 pupylate_PafA2: proteasome accessory factor PafA2 3 471 4.4E-209 T 10-03-2017 IPR022366 Pup deamidase GO:0008233|GO:0016811 CpPa04_RS05275 d954e2e129a070fd9ecb454123a6616d 510 Pfam PF03136 Pup-ligase protein 4 454 6.3E-158 T 10-03-2017 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 CpPa04_RS07880 6d8080b7c66c7bf38ac10047c1256919 477 Pfam PF00005 ABC transporter 270 397 3.2E-30 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS07880 6d8080b7c66c7bf38ac10047c1256919 477 Pfam PF00005 ABC transporter 15 162 2.7E-26 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS07880 6d8080b7c66c7bf38ac10047c1256919 477 SMART SM00382 24 220 8.4E-19 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS07880 6d8080b7c66c7bf38ac10047c1256919 477 SMART SM00382 278 449 4.1E-17 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS07880 6d8080b7c66c7bf38ac10047c1256919 477 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 449 476 0.001 T 10-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CpPa04_RS07880 6d8080b7c66c7bf38ac10047c1256919 477 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 214 238 0.0014 T 10-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CpPa04_RS07880 6d8080b7c66c7bf38ac10047c1256919 477 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS07880 6d8080b7c66c7bf38ac10047c1256919 477 Gene3D G3DSA:3.40.50.300 251 475 3.2E-77 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07880 6d8080b7c66c7bf38ac10047c1256919 477 Gene3D G3DSA:3.40.50.300 3 236 3.0E-69 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07880 6d8080b7c66c7bf38ac10047c1256919 477 SUPERFAMILY SSF52540 247 475 3.2E-66 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07880 6d8080b7c66c7bf38ac10047c1256919 477 SUPERFAMILY SSF52540 5 233 7.17E-60 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07880 6d8080b7c66c7bf38ac10047c1256919 477 ProSitePatterns PS00211 ABC transporters family signature. 370 384 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS04755 c370c03172e0422332cbef04ffc72117 699 Hamap MF_00204 UvrABC system protein B [uvrB]. 26 690 42.629 T 10-03-2017 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CpPa04_RS04755 c370c03172e0422332cbef04ffc72117 699 SMART SM00487 32 448 1.2E-25 T 10-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CpPa04_RS04755 c370c03172e0422332cbef04ffc72117 699 Gene3D G3DSA:3.40.50.300 441 604 4.0E-39 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04755 c370c03172e0422332cbef04ffc72117 699 SUPERFAMILY SSF46600 645 692 6.41E-10 T 10-03-2017 IPR001943 UVR domain GO:0005515 CpPa04_RS04755 c370c03172e0422332cbef04ffc72117 699 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 27 688 0.0 T 10-03-2017 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CpPa04_RS04755 c370c03172e0422332cbef04ffc72117 699 Gene3D G3DSA:4.10.860.10 643 693 1.2E-12 T 10-03-2017 IPR001943 UVR domain GO:0005515 CpPa04_RS04755 c370c03172e0422332cbef04ffc72117 699 Pfam PF04851 Type III restriction enzyme, res subunit 36 160 1.0E-8 T 10-03-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CpPa04_RS04755 c370c03172e0422332cbef04ffc72117 699 Pfam PF00271 Helicase conserved C-terminal domain 454 567 1.1E-20 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS04755 c370c03172e0422332cbef04ffc72117 699 Pfam PF12344 Ultra-violet resistance protein B 574 615 1.4E-22 T 10-03-2017 IPR024759 UvrB, YAD/RRR-motif-containing domain CpPa04_RS04755 c370c03172e0422332cbef04ffc72117 699 Gene3D G3DSA:3.30.2060.10 183 252 2.4E-10 T 10-03-2017 CpPa04_RS04755 c370c03172e0422332cbef04ffc72117 699 Pfam PF02151 UvrB/uvrC motif 656 689 3.1E-8 T 10-03-2017 IPR001943 UVR domain GO:0005515 CpPa04_RS04755 c370c03172e0422332cbef04ffc72117 699 SUPERFAMILY SSF52540 28 437 1.27E-128 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04755 c370c03172e0422332cbef04ffc72117 699 Gene3D G3DSA:3.40.50.300 300 360 9.6E-50 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04755 c370c03172e0422332cbef04ffc72117 699 Gene3D G3DSA:3.40.50.300 30 112 9.6E-50 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04755 c370c03172e0422332cbef04ffc72117 699 Gene3D G3DSA:3.40.50.300 410 428 9.6E-50 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04755 c370c03172e0422332cbef04ffc72117 699 SMART SM00490 482 568 3.5E-19 T 10-03-2017 IPR001650 Helicase, C-terminal CpPa04_RS04755 c370c03172e0422332cbef04ffc72117 699 SUPERFAMILY SSF52540 55 103 3.01E-37 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04755 c370c03172e0422332cbef04ffc72117 699 SUPERFAMILY SSF52540 492 615 3.01E-37 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00575 9d61cedc608e5f5d7bd6f61c9609f80d 330 Gene3D G3DSA:3.40.50.1980 206 327 8.0E-34 T 10-03-2017 CpPa04_RS00575 9d61cedc608e5f5d7bd6f61c9609f80d 330 Gene3D G3DSA:3.40.50.1980 40 205 7.9E-46 T 10-03-2017 CpPa04_RS00575 9d61cedc608e5f5d7bd6f61c9609f80d 330 Pfam PF01297 Zinc-uptake complex component A periplasmic 42 327 6.7E-67 T 10-03-2017 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CpPa04_RS00575 9d61cedc608e5f5d7bd6f61c9609f80d 330 PRINTS PR00690 Adhesin family signature 82 99 2.1E-27 T 10-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 CpPa04_RS00575 9d61cedc608e5f5d7bd6f61c9609f80d 330 PRINTS PR00690 Adhesin family signature 210 231 2.1E-27 T 10-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 CpPa04_RS00575 9d61cedc608e5f5d7bd6f61c9609f80d 330 PRINTS PR00690 Adhesin family signature 263 281 2.1E-27 T 10-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 CpPa04_RS00575 9d61cedc608e5f5d7bd6f61c9609f80d 330 PRINTS PR00690 Adhesin family signature 69 82 2.1E-27 T 10-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 CpPa04_RS00575 9d61cedc608e5f5d7bd6f61c9609f80d 330 PRINTS PR00690 Adhesin family signature 39 57 2.1E-27 T 10-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 CpPa04_RS00575 9d61cedc608e5f5d7bd6f61c9609f80d 330 PRINTS PR00691 Adhesin B signature 39 60 1.9E-14 T 10-03-2017 IPR006129 Adhesin B GO:0007155 CpPa04_RS00575 9d61cedc608e5f5d7bd6f61c9609f80d 330 PRINTS PR00691 Adhesin B signature 82 101 1.9E-14 T 10-03-2017 IPR006129 Adhesin B GO:0007155 CpPa04_RS00575 9d61cedc608e5f5d7bd6f61c9609f80d 330 PRINTS PR00691 Adhesin B signature 210 227 1.9E-14 T 10-03-2017 IPR006129 Adhesin B GO:0007155 CpPa04_RS00575 9d61cedc608e5f5d7bd6f61c9609f80d 330 PRINTS PR00691 Adhesin B signature 307 325 1.9E-14 T 10-03-2017 IPR006129 Adhesin B GO:0007155 CpPa04_RS00575 9d61cedc608e5f5d7bd6f61c9609f80d 330 SUPERFAMILY SSF53807 39 328 1.18E-70 T 10-03-2017 CpPa04_RS03890 9fd4117058ccc3d879dd3fbee48f8ded 177 SUPERFAMILY SSF159234 4 167 3.4E-50 T 10-03-2017 CpPa04_RS03890 9fd4117058ccc3d879dd3fbee48f8ded 177 PIRSF PIRSF012622 1 177 2.2E-85 T 10-03-2017 IPR014465 Uncharacterised conserved protein UCP012622 CpPa04_RS03890 9fd4117058ccc3d879dd3fbee48f8ded 177 Pfam PF04167 Protein of unknown function (DUF402) 52 119 4.1E-17 T 10-03-2017 IPR007295 Domain of unknown function DUF402 CpPa04_RS03890 9fd4117058ccc3d879dd3fbee48f8ded 177 Gene3D G3DSA:2.40.380.10 1 163 3.4E-71 T 10-03-2017 IPR007295 Domain of unknown function DUF402 CpPa04_RS01640 c33dc3247f36c9b91361381ca1b73797 293 Gene3D G3DSA:1.10.3470.10 58 267 1.3E-14 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS01640 c33dc3247f36c9b91361381ca1b73797 293 TIGRFAM TIGR03770 anch_rpt_perm: anchored repeat-type ABC transporter, permease subunit 4 271 3.3E-129 T 10-03-2017 IPR022392 Anchored repeat-type ABC transporter, permease subunit CpPa04_RS01640 c33dc3247f36c9b91361381ca1b73797 293 SUPERFAMILY SSF81345 16 267 4.32E-43 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS01640 c33dc3247f36c9b91361381ca1b73797 293 Pfam PF00950 ABC 3 transport family 17 270 1.7E-69 T 10-03-2017 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CpPa04_RS00345 1c939930b957e5ee6c7560b65c43dd40 268 Pfam PF01674 Lipase (class 2) 35 205 6.8E-11 T 10-03-2017 IPR002918 Lipase EstA/Esterase EstB GO:0016787 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 CpPa04_RS00345 1c939930b957e5ee6c7560b65c43dd40 268 Gene3D G3DSA:3.40.50.1820 23 253 3.3E-53 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS00345 1c939930b957e5ee6c7560b65c43dd40 268 SUPERFAMILY SSF53474 32 211 8.59E-30 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS08805 58c9abf7d656c21a59ef59cc7dbb70fd 223 SUPERFAMILY SSF52317 3 218 1.58E-68 T 10-03-2017 IPR029062 Class I glutamine amidotransferase-like CpPa04_RS08805 58c9abf7d656c21a59ef59cc7dbb70fd 223 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 4 208 5.9E-38 T 10-03-2017 CpPa04_RS08805 58c9abf7d656c21a59ef59cc7dbb70fd 223 SMART SM01211 2 221 6.3E-118 T 10-03-2017 CpPa04_RS08805 58c9abf7d656c21a59ef59cc7dbb70fd 223 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 4 218 4.1E-80 T 10-03-2017 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 CpPa04_RS08805 58c9abf7d656c21a59ef59cc7dbb70fd 223 PIRSF PIRSF001586 1 223 6.8E-78 T 10-03-2017 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 CpPa04_RS08805 58c9abf7d656c21a59ef59cc7dbb70fd 223 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 3 219 38.519 T 10-03-2017 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 CpPa04_RS08805 58c9abf7d656c21a59ef59cc7dbb70fd 223 Gene3D G3DSA:3.40.50.880 2 218 1.7E-36 T 10-03-2017 IPR029062 Class I glutamine amidotransferase-like CpPa04_RS08180 4ba89f33015d66bf3e746aaebd05ab4f 186 Gene3D G3DSA:2.40.50.140 4 114 3.0E-23 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS08180 4ba89f33015d66bf3e746aaebd05ab4f 186 SUPERFAMILY SSF50249 6 153 3.14E-15 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS08180 4ba89f33015d66bf3e746aaebd05ab4f 186 Pfam PF00436 Single-strand binding protein family 6 105 1.9E-12 T 10-03-2017 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CpPa04_RS10630 30448f3ae7453a5c31051cc442fa18e8 198 Pfam PF02622 Uncharacterized ACR, COG1678 25 181 1.1E-31 T 10-03-2017 IPR003774 Protein of unknown function UPF0301 CpPa04_RS10630 30448f3ae7453a5c31051cc442fa18e8 198 SUPERFAMILY SSF143456 4 192 1.31E-42 T 10-03-2017 CpPa04_RS10630 30448f3ae7453a5c31051cc442fa18e8 198 Gene3D G3DSA:3.40.1740.10 6 53 1.9E-24 T 10-03-2017 CpPa04_RS10630 30448f3ae7453a5c31051cc442fa18e8 198 Gene3D G3DSA:3.40.1740.10 139 183 1.9E-24 T 10-03-2017 CpPa04_RS07745 39b6646ef8c265583661161fc8d62c67 441 SUPERFAMILY SSF54631 198 336 4.8E-32 T 10-03-2017 CpPa04_RS07745 39b6646ef8c265583661161fc8d62c67 441 Pfam PF00571 CBS domain 271 325 1.3E-5 T 10-03-2017 IPR000644 CBS domain CpPa04_RS07745 39b6646ef8c265583661161fc8d62c67 441 Pfam PF00571 CBS domain 207 257 0.0069 T 10-03-2017 IPR000644 CBS domain CpPa04_RS07745 39b6646ef8c265583661161fc8d62c67 441 Pfam PF01595 Domain of unknown function DUF21 13 187 2.6E-28 T 10-03-2017 IPR002550 Domain of unknown function DUF21 CpPa04_RS07745 39b6646ef8c265583661161fc8d62c67 441 Pfam PF03471 Transporter associated domain 351 421 7.6E-5 T 10-03-2017 IPR005170 Transporter-associated domain CpPa04_RS07745 39b6646ef8c265583661161fc8d62c67 441 SMART SM01091 344 435 3.7E-7 T 10-03-2017 IPR005170 Transporter-associated domain CpPa04_RS07745 39b6646ef8c265583661161fc8d62c67 441 Gene3D G3DSA:3.10.580.10 187 333 1.0E-20 T 10-03-2017 CpPa04_RS07745 39b6646ef8c265583661161fc8d62c67 441 Gene3D G3DSA:3.30.465.10 334 429 1.2E-19 T 10-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CpPa04_RS07745 39b6646ef8c265583661161fc8d62c67 441 SUPERFAMILY SSF56176 351 421 2.07E-7 T 10-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CpPa04_RS07535 2b9bf2d95d75285eb6e6c6652b5f7cb4 429 SUPERFAMILY SSF54211 30 240 1.14E-17 T 10-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CpPa04_RS07535 2b9bf2d95d75285eb6e6c6652b5f7cb4 429 PRINTS PR00959 Mevalonate kinase family signature 381 398 6.1E-10 T 10-03-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CpPa04_RS07535 2b9bf2d95d75285eb6e6c6652b5f7cb4 429 PRINTS PR00959 Mevalonate kinase family signature 35 59 6.1E-10 T 10-03-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CpPa04_RS07535 2b9bf2d95d75285eb6e6c6652b5f7cb4 429 PRINTS PR00959 Mevalonate kinase family signature 156 178 6.1E-10 T 10-03-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CpPa04_RS07535 2b9bf2d95d75285eb6e6c6652b5f7cb4 429 Pfam PF10509 Galactokinase galactose-binding signature 31 68 3.7E-7 T 10-03-2017 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CpPa04_RS07535 2b9bf2d95d75285eb6e6c6652b5f7cb4 429 Gene3D G3DSA:3.30.230.10 15 235 1.3E-16 T 10-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CpPa04_RS07535 2b9bf2d95d75285eb6e6c6652b5f7cb4 429 Gene3D G3DSA:3.30.70.890 268 410 7.9E-8 T 10-03-2017 IPR013750 GHMP kinase, C-terminal domain CpPa04_RS10275 7b56f298282fd5cdc088c4cccbeb0968 295 Pfam PF04012 PspA/IM30 family 3 237 7.7E-28 T 10-03-2017 IPR007157 PspA/IM30 CpPa04_RS01465 3d0fd6ba056d3a129b1fede905add336 256 Pfam PF00005 ABC transporter 17 166 1.1E-30 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS01465 3d0fd6ba056d3a129b1fede905add336 256 SMART SM00382 26 210 5.9E-19 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS01465 3d0fd6ba056d3a129b1fede905add336 256 SUPERFAMILY SSF52540 2 224 7.7E-58 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01465 3d0fd6ba056d3a129b1fede905add336 256 Gene3D G3DSA:3.40.50.300 1 229 8.1E-62 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01465 3d0fd6ba056d3a129b1fede905add336 256 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS03145 1de6439abccc9a929496e28f0c76b826 356 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 10-03-2017 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CpPa04_RS03145 1de6439abccc9a929496e28f0c76b826 356 Gene3D G3DSA:3.40.50.1100 5 42 5.4E-42 T 10-03-2017 CpPa04_RS03145 1de6439abccc9a929496e28f0c76b826 356 Gene3D G3DSA:3.40.50.1100 153 316 5.4E-42 T 10-03-2017 CpPa04_RS03145 1de6439abccc9a929496e28f0c76b826 356 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 297 4.9E-53 T 10-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CpPa04_RS03145 1de6439abccc9a929496e28f0c76b826 356 SUPERFAMILY SSF53686 6 318 3.14E-68 T 10-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CpPa04_RS03145 1de6439abccc9a929496e28f0c76b826 356 Gene3D G3DSA:3.40.50.1100 43 147 1.2E-24 T 10-03-2017 CpPa04_RS00935 218733ef8296f29650773e262a2a17a8 517 SUPERFAMILY SSF161098 284 492 8.5E-10 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS00935 218733ef8296f29650773e262a2a17a8 517 Gene3D G3DSA:1.10.3720.10 37 234 3.0E-13 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS00935 218733ef8296f29650773e262a2a17a8 517 Gene3D G3DSA:1.10.3720.10 286 493 9.6E-5 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS00935 218733ef8296f29650773e262a2a17a8 517 SUPERFAMILY SSF161098 5 231 4.01E-18 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS00935 218733ef8296f29650773e262a2a17a8 517 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 58 234 2.2E-5 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS00405 29c184564cfe3a871b96150babcc2d8d 270 Pfam PF01925 Sulfite exporter TauE/SafE 25 262 6.9E-35 T 10-03-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 CpPa04_RS06040 3428efdc7188d7bc7ff623a89c4883d5 190 SUPERFAMILY SSF81296 35 132 1.96E-16 T 10-03-2017 IPR014756 Immunoglobulin E-set CpPa04_RS06040 3428efdc7188d7bc7ff623a89c4883d5 190 Gene3D G3DSA:2.60.40.1220 35 132 8.0E-16 T 10-03-2017 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like CpPa04_RS06040 3428efdc7188d7bc7ff623a89c4883d5 190 Pfam PF04234 CopC domain 36 132 6.7E-18 T 10-03-2017 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 CpPa04_RS07315 5495c97e91c558df31e3d5e4bb5ffc61 251 Pfam PF03099 Biotin/lipoate A/B protein ligase family 77 178 4.3E-8 T 10-03-2017 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CpPa04_RS07315 5495c97e91c558df31e3d5e4bb5ffc61 251 Gene3D G3DSA:3.90.1550.10 20 226 5.8E-71 T 10-03-2017 CpPa04_RS07315 5495c97e91c558df31e3d5e4bb5ffc61 251 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 91 144 2.0E-19 T 10-03-2017 CpPa04_RS07315 5495c97e91c558df31e3d5e4bb5ffc61 251 SUPERFAMILY SSF55681 17 227 1.24E-62 T 10-03-2017 CpPa04_RS07315 5495c97e91c558df31e3d5e4bb5ffc61 251 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 87 102 - T 10-03-2017 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CpPa04_RS07315 5495c97e91c558df31e3d5e4bb5ffc61 251 PIRSF PIRSF016262 17 237 7.8E-61 T 10-03-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CpPa04_RS07315 5495c97e91c558df31e3d5e4bb5ffc61 251 Hamap MF_00013 Octanoyltransferase [lipB]. 21 229 34.368 T 10-03-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CpPa04_RS07315 5495c97e91c558df31e3d5e4bb5ffc61 251 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 47 225 2.8E-41 T 10-03-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CpPa04_RS03010 94c35353b80e12659715136110460c70 213 Pfam PF11580 Protein of unknown function (DUF3239) 76 200 1.2E-50 T 10-03-2017 IPR021632 Protein of unknown function DUF3239 CpPa04_RS03010 94c35353b80e12659715136110460c70 213 Gene3D G3DSA:2.40.410.10 75 212 1.5E-58 T 10-03-2017 IPR023124 DUF3239 domain CpPa04_RS09285 7c0d10cfaf89d51664bab058499cf805 320 SUPERFAMILY SSF55729 67 314 6.0E-23 T 10-03-2017 IPR016181 Acyl-CoA N-acyltransferase CpPa04_RS09285 7c0d10cfaf89d51664bab058499cf805 320 Pfam PF00583 Acetyltransferase (GNAT) family 246 306 8.4E-13 T 10-03-2017 IPR000182 GNAT domain GO:0008080 CpPa04_RS09285 7c0d10cfaf89d51664bab058499cf805 320 Gene3D G3DSA:3.40.630.30 211 314 5.8E-19 T 10-03-2017 IPR016181 Acyl-CoA N-acyltransferase CpPa04_RS01195 1c1f26416845c76c1e615189af204f91 289 Pfam PF00483 Nucleotidyl transferase 2 235 3.7E-62 T 10-03-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CpPa04_RS01195 1c1f26416845c76c1e615189af204f91 289 SUPERFAMILY SSF53448 2 284 4.73E-79 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS01195 1c1f26416845c76c1e615189af204f91 289 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 283 8.9E-126 T 10-03-2017 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 CpPa04_RS01195 1c1f26416845c76c1e615189af204f91 289 Gene3D G3DSA:3.90.550.10 2 256 3.2E-64 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS10585 40a2f2238fed60ae8681ae535a060af4 495 SUPERFAMILY SSF51366 68 277 6.69E-67 T 10-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CpPa04_RS10585 40a2f2238fed60ae8681ae535a060af4 495 SUPERFAMILY SSF51366 280 491 4.87E-31 T 10-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CpPa04_RS10585 40a2f2238fed60ae8681ae535a060af4 495 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 281 493 21.654 T 10-03-2017 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CpPa04_RS10585 40a2f2238fed60ae8681ae535a060af4 495 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 73 91 - T 10-03-2017 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 CpPa04_RS10585 40a2f2238fed60ae8681ae535a060af4 495 Gene3D G3DSA:3.20.20.70 281 492 4.9E-39 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS10585 40a2f2238fed60ae8681ae535a060af4 495 Pfam PF00218 Indole-3-glycerol phosphate synthase 66 274 4.5E-78 T 10-03-2017 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CpPa04_RS10585 40a2f2238fed60ae8681ae535a060af4 495 Gene3D G3DSA:3.20.20.70 9 277 3.5E-79 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS10585 40a2f2238fed60ae8681ae535a060af4 495 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 280 487 1.1E-25 T 10-03-2017 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CpPa04_RS02245 fb3fa2c8d0c5bd89933fab8a01149a95 195 SUPERFAMILY SSF50494 12 82 1.35E-6 T 10-03-2017 IPR009003 Peptidase S1, PA clan CpPa04_RS02245 fb3fa2c8d0c5bd89933fab8a01149a95 195 Gene3D G3DSA:2.40.10.10 9 80 1.1E-7 T 10-03-2017 CpPa04_RS00775 6334032ff633b4a4a6ff0b4327af6e22 445 Pfam PF02447 GntP family permease 7 441 3.2E-124 T 10-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CpPa04_RS00775 6334032ff633b4a4a6ff0b4327af6e22 445 PIRSF PIRSF002746 1 445 3.6E-135 T 10-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CpPa04_RS00775 6334032ff633b4a4a6ff0b4327af6e22 445 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 7 445 8.8E-107 T 10-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CpPa04_RS00570 eb3b86cae18fed5121049039a8244b89 291 SUPERFAMILY SSF81345 7 272 2.22E-26 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS00570 eb3b86cae18fed5121049039a8244b89 291 Gene3D G3DSA:1.10.3470.10 45 272 1.2E-5 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS00570 eb3b86cae18fed5121049039a8244b89 291 Pfam PF00950 ABC 3 transport family 4 270 1.2E-45 T 10-03-2017 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CpPa04_RS00140 e2724a709fe358f2df9a3196eb70976b 328 Gene3D G3DSA:1.10.3470.10 1 327 1.0E-80 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS00140 e2724a709fe358f2df9a3196eb70976b 328 Pfam PF01032 FecCD transport family 16 322 5.8E-75 T 10-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CpPa04_RS00140 e2724a709fe358f2df9a3196eb70976b 328 SUPERFAMILY SSF81345 3 321 1.57E-64 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS05285 c830b8684f459fb020ec82a1feb57d41 278 Gene3D G3DSA:3.10.330.20 2 67 2.0E-27 T 10-03-2017 CpPa04_RS05285 c830b8684f459fb020ec82a1feb57d41 278 Pfam PF14801 tRNA methyltransferase complex GCD14 subunit N-term 4 54 5.5E-26 T 10-03-2017 CpPa04_RS05285 c830b8684f459fb020ec82a1feb57d41 278 PIRSF PIRSF017269 1 273 1.1E-80 T 10-03-2017 IPR014816 tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 GO:0016429|GO:0030488|GO:0031515 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829 CpPa04_RS05285 c830b8684f459fb020ec82a1feb57d41 278 Gene3D G3DSA:3.40.50.150 71 277 2.1E-58 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS05285 c830b8684f459fb020ec82a1feb57d41 278 SUPERFAMILY SSF53335 6 262 2.18E-67 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS05285 c830b8684f459fb020ec82a1feb57d41 278 Pfam PF08704 tRNA methyltransferase complex GCD14 subunit 75 240 1.2E-18 T 10-03-2017 IPR014816 tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 GO:0016429|GO:0030488|GO:0031515 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829 CpPa04_RS07605 dfe3e52b2ef944d1f3be9c8e82f8e7e6 321 SUPERFAMILY SSF53474 37 307 1.74E-46 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS07605 dfe3e52b2ef944d1f3be9c8e82f8e7e6 321 Gene3D G3DSA:3.40.50.1820 37 310 8.7E-48 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS07605 dfe3e52b2ef944d1f3be9c8e82f8e7e6 321 Pfam PF12697 Alpha/beta hydrolase family 53 303 8.8E-23 T 10-03-2017 IPR000073 Alpha/beta hydrolase fold-1 CpPa04_RS07420 898f963454fcc04bbc38342ba1e88050 59 SUPERFAMILY SSF53335 1 39 3.9E-5 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS07420 898f963454fcc04bbc38342ba1e88050 59 Pfam PF02384 N-6 DNA Methylase 1 39 2.3E-4 T 10-03-2017 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CpPa04_RS04860 7e44d50553cdcbcbd8a428b3eec25ca4 61 Gene3D G3DSA:2.20.25.10 10 54 3.7E-18 T 10-03-2017 CpPa04_RS04860 7e44d50553cdcbcbd8a428b3eec25ca4 61 Pfam PF03966 Trm112p-like protein 4 42 5.7E-7 T 10-03-2017 IPR005651 Uncharacterised protein family UPF0434/Trm112 CpPa04_RS04860 7e44d50553cdcbcbd8a428b3eec25ca4 61 SUPERFAMILY SSF158997 1 56 1.11E-18 T 10-03-2017 CpPa04_RS07540 819d1dea5c4c5467912a8fc3cf6ef90f 461 Pfam PF00773 RNB domain 42 344 2.6E-39 T 10-03-2017 CpPa04_RS07540 819d1dea5c4c5467912a8fc3cf6ef90f 461 SUPERFAMILY SSF50249 9 396 5.71E-79 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS07540 819d1dea5c4c5467912a8fc3cf6ef90f 461 SMART SM00955 42 354 1.2E-45 T 10-03-2017 CpPa04_RS01475 c751d7988e1c49ffa9f9a48350b0a408 340 Gene3D G3DSA:1.10.3470.10 6 338 4.7E-94 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS01475 c751d7988e1c49ffa9f9a48350b0a408 340 SUPERFAMILY SSF81345 6 336 5.89E-74 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS01475 c751d7988e1c49ffa9f9a48350b0a408 340 Pfam PF01032 FecCD transport family 19 336 4.3E-86 T 10-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CpPa04_RS05595 bb5395417d4c6c831bc41aaaa757e9d2 360 SUPERFAMILY SSF51569 1 358 1.59E-75 T 10-03-2017 CpPa04_RS05595 bb5395417d4c6c831bc41aaaa757e9d2 360 Pfam PF00923 Transaldolase 15 354 3.8E-81 T 10-03-2017 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 CpPa04_RS05595 bb5395417d4c6c831bc41aaaa757e9d2 360 Hamap MF_00493 Transaldolase [tal]. 1 360 143.189 T 10-03-2017 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CpPa04_RS05595 bb5395417d4c6c831bc41aaaa757e9d2 360 ProSitePatterns PS01054 Transaldolase signature 1. 40 48 - T 10-03-2017 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 CpPa04_RS05595 bb5395417d4c6c831bc41aaaa757e9d2 360 Gene3D G3DSA:3.20.20.70 1 355 2.7E-117 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS05595 bb5395417d4c6c831bc41aaaa757e9d2 360 PIRSF PIRSF036915 1 360 1.0E-157 T 10-03-2017 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CpPa04_RS05595 bb5395417d4c6c831bc41aaaa757e9d2 360 TIGRFAM TIGR00876 tal_mycobact: transaldolase 11 353 3.8E-127 T 10-03-2017 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CpPa04_RS07665 f4c847f0775b07e7ec623c5e829bdbac 175 Gene3D G3DSA:3.10.450.30 77 173 3.8E-37 T 10-03-2017 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 CpPa04_RS07665 f4c847f0775b07e7ec623c5e829bdbac 175 Pfam PF00545 ribonuclease 85 170 1.9E-28 T 10-03-2017 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 CpPa04_RS07665 f4c847f0775b07e7ec623c5e829bdbac 175 SUPERFAMILY SSF53933 76 172 2.38E-33 T 10-03-2017 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 CpPa04_RS06600 9070f5cfc229b10ae3edb547c118b5f0 613 Gene3D G3DSA:3.40.710.10 320 607 1.0E-57 T 10-03-2017 IPR012338 Beta-lactamase/transpeptidase-like CpPa04_RS06600 9070f5cfc229b10ae3edb547c118b5f0 613 Pfam PF00905 Penicillin binding protein transpeptidase domain 335 602 5.3E-41 T 10-03-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CpPa04_RS06600 9070f5cfc229b10ae3edb547c118b5f0 613 SUPERFAMILY SSF56601 314 599 5.07E-57 T 10-03-2017 IPR012338 Beta-lactamase/transpeptidase-like CpPa04_RS06600 9070f5cfc229b10ae3edb547c118b5f0 613 Gene3D G3DSA:3.90.1310.10 273 319 6.0E-5 T 10-03-2017 CpPa04_RS06600 9070f5cfc229b10ae3edb547c118b5f0 613 Pfam PF05223 NTF2-like N-terminal transpeptidase domain 35 143 7.7E-19 T 10-03-2017 IPR007887 NTF2-like N-terminal transpeptidase GO:0046677 CpPa04_RS06600 9070f5cfc229b10ae3edb547c118b5f0 613 SUPERFAMILY SSF54427 39 139 6.31E-5 T 10-03-2017 IPR032710 NTF2-like domain CpPa04_RS06600 9070f5cfc229b10ae3edb547c118b5f0 613 Gene3D G3DSA:3.10.450.50 40 128 5.5E-4 T 10-03-2017 IPR032710 NTF2-like domain CpPa04_RS04810 c1007cb0e2398ae32a11e71799eb83e3 351 SUPERFAMILY SSF46589 26 111 3.77E-15 T 10-03-2017 IPR010978 tRNA-binding arm GO:0000166 CpPa04_RS04810 c1007cb0e2398ae32a11e71799eb83e3 351 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 21 347 42.963 T 10-03-2017 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 CpPa04_RS04810 c1007cb0e2398ae32a11e71799eb83e3 351 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 57 343 3.1E-87 T 10-03-2017 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CpPa04_RS04810 c1007cb0e2398ae32a11e71799eb83e3 351 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 32 99 3.8E-15 T 10-03-2017 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CpPa04_RS04810 c1007cb0e2398ae32a11e71799eb83e3 351 Gene3D G3DSA:3.30.930.10 23 348 5.9E-115 T 10-03-2017 CpPa04_RS04810 c1007cb0e2398ae32a11e71799eb83e3 351 Pfam PF01409 tRNA synthetases class II core domain (F) 105 344 1.6E-97 T 10-03-2017 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 CpPa04_RS04810 c1007cb0e2398ae32a11e71799eb83e3 351 SUPERFAMILY SSF55681 105 344 5.39E-75 T 10-03-2017 CpPa04_RS08425 f5226893827d90c3c85a568c97d477d4 664 Pfam PF00270 DEAD/DEAH box helicase 47 100 1.8E-5 T 10-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CpPa04_RS08425 f5226893827d90c3c85a568c97d477d4 664 Gene3D G3DSA:3.40.50.300 482 620 1.0E-4 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08425 f5226893827d90c3c85a568c97d477d4 664 SUPERFAMILY SSF52540 49 103 2.55E-22 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08425 f5226893827d90c3c85a568c97d477d4 664 SUPERFAMILY SSF52540 201 271 2.55E-22 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08425 f5226893827d90c3c85a568c97d477d4 664 SUPERFAMILY SSF52540 414 428 2.55E-22 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08425 f5226893827d90c3c85a568c97d477d4 664 SUPERFAMILY SSF52540 461 621 2.55E-22 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08425 f5226893827d90c3c85a568c97d477d4 664 SMART SM00487 31 319 3.5E-4 T 10-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CpPa04_RS08425 f5226893827d90c3c85a568c97d477d4 664 Gene3D G3DSA:3.40.50.300 45 124 4.3E-21 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08425 f5226893827d90c3c85a568c97d477d4 664 Gene3D G3DSA:3.40.50.300 201 274 4.3E-21 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08425 f5226893827d90c3c85a568c97d477d4 664 Gene3D G3DSA:3.40.50.300 416 424 4.3E-21 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08425 f5226893827d90c3c85a568c97d477d4 664 Pfam PF13307 Helicase C-terminal domain 484 643 6.8E-31 T 10-03-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CpPa04_RS08425 f5226893827d90c3c85a568c97d477d4 664 SMART SM00491 502 631 1.4E-42 T 10-03-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CpPa04_RS07415 c013790e7e5e6cc33d2cad30b184fc18 307 Pfam PF00580 UvrD/REP helicase N-terminal domain 143 196 2.4E-6 T 10-03-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CpPa04_RS07415 c013790e7e5e6cc33d2cad30b184fc18 307 Gene3D G3DSA:3.40.50.300 129 243 5.6E-18 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07415 c013790e7e5e6cc33d2cad30b184fc18 307 Gene3D G3DSA:3.40.50.300 12 94 5.6E-18 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07415 c013790e7e5e6cc33d2cad30b184fc18 307 SUPERFAMILY SSF52540 11 253 1.53E-20 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02275 09721176b4bad2c90baf776d5ab88bf0 226 SUPERFAMILY SSF47979 68 140 6.54E-27 T 10-03-2017 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 CpPa04_RS02275 09721176b4bad2c90baf776d5ab88bf0 226 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 68 136 1.2E-30 T 10-03-2017 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 CpPa04_RS02275 09721176b4bad2c90baf776d5ab88bf0 226 SUPERFAMILY SSF46785 8 67 2.6E-9 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS02275 09721176b4bad2c90baf776d5ab88bf0 226 Gene3D G3DSA:2.30.30.90 156 219 1.3E-4 T 10-03-2017 CpPa04_RS02275 09721176b4bad2c90baf776d5ab88bf0 226 SMART SM00529 29 128 1.1E-34 T 10-03-2017 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 CpPa04_RS02275 09721176b4bad2c90baf776d5ab88bf0 226 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 6 64 8.0E-12 T 10-03-2017 IPR022687 DTXR-type HTH domain GO:0003677 CpPa04_RS02275 09721176b4bad2c90baf776d5ab88bf0 226 SMART SM00899 148 220 4.2E-8 T 10-03-2017 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CpPa04_RS02275 09721176b4bad2c90baf776d5ab88bf0 226 Gene3D G3DSA:1.10.10.10 5 76 1.5E-17 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS02275 09721176b4bad2c90baf776d5ab88bf0 226 Pfam PF04023 FeoA domain 149 219 2.6E-10 T 10-03-2017 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CpPa04_RS02275 09721176b4bad2c90baf776d5ab88bf0 226 Gene3D G3DSA:1.10.60.10 78 141 8.0E-32 T 10-03-2017 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 CpPa04_RS02275 09721176b4bad2c90baf776d5ab88bf0 226 SUPERFAMILY SSF50037 153 219 4.12E-10 T 10-03-2017 IPR008988 Transcriptional repressor, C-terminal CpPa04_RS00065 b2335d7bb812fe3ab17a9d27481c691a 259 Pfam PF14256 YwiC-like protein 17 140 3.8E-42 T 10-03-2017 IPR025576 YwiC-like protein CpPa04_RS10325 58ab46162c4f82a384e7a54a0d9e412f 98 SUPERFAMILY SSF54995 4 97 2.75E-30 T 10-03-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS10325 58ab46162c4f82a384e7a54a0d9e412f 98 ProSitePatterns PS01048 Ribosomal protein S6 signature. 47 56 - T 10-03-2017 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 CpPa04_RS10325 58ab46162c4f82a384e7a54a0d9e412f 98 Gene3D G3DSA:3.30.70.60 4 97 9.5E-32 T 10-03-2017 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CpPa04_RS10325 58ab46162c4f82a384e7a54a0d9e412f 98 Pfam PF01250 Ribosomal protein S6 6 95 1.0E-25 T 10-03-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS10325 58ab46162c4f82a384e7a54a0d9e412f 98 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 4 98 20.292 T 10-03-2017 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 CpPa04_RS10325 58ab46162c4f82a384e7a54a0d9e412f 98 TIGRFAM TIGR00166 S6: ribosomal protein bS6 4 95 4.7E-24 T 10-03-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS10625 87227aac1a75dde8f7b6ba8afadc643f 238 Pfam PF03591 AzlC protein 20 157 4.0E-37 T 10-03-2017 IPR011606 Branched-chain amino acid transport, permease CpPa04_RS04765 2e4aee5527e62d96c3c559e324a21281 774 Pfam PF01443 Viral (Superfamily 1) RNA helicase 558 769 4.5E-9 T 10-03-2017 IPR027351 (+) RNA virus helicase core domain GO:0005524 CpPa04_RS04765 2e4aee5527e62d96c3c559e324a21281 774 Pfam PF13245 Part of AAA domain 239 299 2.0E-15 T 10-03-2017 CpPa04_RS04765 2e4aee5527e62d96c3c559e324a21281 774 SUPERFAMILY SSF52540 220 299 1.16E-46 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04765 2e4aee5527e62d96c3c559e324a21281 774 SUPERFAMILY SSF52540 558 772 1.16E-46 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04765 2e4aee5527e62d96c3c559e324a21281 774 SUPERFAMILY SSF52540 396 437 1.16E-46 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04765 2e4aee5527e62d96c3c559e324a21281 774 Gene3D G3DSA:3.40.50.300 227 296 4.7E-32 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04765 2e4aee5527e62d96c3c559e324a21281 774 Gene3D G3DSA:3.40.50.300 533 647 4.7E-32 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04765 2e4aee5527e62d96c3c559e324a21281 774 SMART SM00382 240 651 0.0024 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS04765 2e4aee5527e62d96c3c559e324a21281 774 Gene3D G3DSA:3.40.50.300 648 719 6.0E-5 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04765 2e4aee5527e62d96c3c559e324a21281 774 Gene3D G3DSA:3.40.50.300 724 770 2.4E-9 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06920 c6a94694989080aa4083a4798ff566de 441 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 234 266 - T 10-03-2017 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 CpPa04_RS06920 c6a94694989080aa4083a4798ff566de 441 Gene3D G3DSA:3.40.50.1980 28 244 1.9E-76 T 10-03-2017 CpPa04_RS06920 c6a94694989080aa4083a4798ff566de 441 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 7 433 38.962 T 10-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CpPa04_RS06920 c6a94694989080aa4083a4798ff566de 441 PRINTS PR00083 Histidinol dehydrogenase signature 367 385 1.1E-82 T 10-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CpPa04_RS06920 c6a94694989080aa4083a4798ff566de 441 PRINTS PR00083 Histidinol dehydrogenase signature 205 230 1.1E-82 T 10-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CpPa04_RS06920 c6a94694989080aa4083a4798ff566de 441 PRINTS PR00083 Histidinol dehydrogenase signature 173 199 1.1E-82 T 10-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CpPa04_RS06920 c6a94694989080aa4083a4798ff566de 441 PRINTS PR00083 Histidinol dehydrogenase signature 256 275 1.1E-82 T 10-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CpPa04_RS06920 c6a94694989080aa4083a4798ff566de 441 PRINTS PR00083 Histidinol dehydrogenase signature 326 351 1.1E-82 T 10-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CpPa04_RS06920 c6a94694989080aa4083a4798ff566de 441 PRINTS PR00083 Histidinol dehydrogenase signature 136 162 1.1E-82 T 10-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CpPa04_RS06920 c6a94694989080aa4083a4798ff566de 441 PRINTS PR00083 Histidinol dehydrogenase signature 234 255 1.1E-82 T 10-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CpPa04_RS06920 c6a94694989080aa4083a4798ff566de 441 PRINTS PR00083 Histidinol dehydrogenase signature 35 59 1.1E-82 T 10-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CpPa04_RS06920 c6a94694989080aa4083a4798ff566de 441 PIRSF PIRSF000099 1 436 2.2E-152 T 10-03-2017 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CpPa04_RS06920 c6a94694989080aa4083a4798ff566de 441 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 35 432 2.6E-141 T 10-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CpPa04_RS06920 c6a94694989080aa4083a4798ff566de 441 SUPERFAMILY SSF53720 29 435 1.63E-63 T 10-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CpPa04_RS06920 c6a94694989080aa4083a4798ff566de 441 Pfam PF00815 Histidinol dehydrogenase 23 433 6.0E-155 T 10-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CpPa04_RS06915 98aa59ccba828a05a42f9090743cdc8c 371 SUPERFAMILY SSF53383 30 359 1.73E-73 T 10-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase CpPa04_RS06915 98aa59ccba828a05a42f9090743cdc8c 371 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 10 362 51.362 T 10-03-2017 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CpPa04_RS06915 98aa59ccba828a05a42f9090743cdc8c 371 Gene3D G3DSA:3.90.1150.10 268 361 2.7E-18 T 10-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CpPa04_RS06915 98aa59ccba828a05a42f9090743cdc8c 371 Pfam PF00155 Aminotransferase class I and II 30 351 2.2E-57 T 10-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CpPa04_RS06915 98aa59ccba828a05a42f9090743cdc8c 371 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 13 360 1.6E-96 T 10-03-2017 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CpPa04_RS06915 98aa59ccba828a05a42f9090743cdc8c 371 Gene3D G3DSA:3.40.640.10 47 267 6.1E-62 T 10-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CpPa04_RS10095 bc641babc070b30c1470d23c8d59342f 239 SUPERFAMILY SSF51695 2 236 1.02E-53 T 10-03-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CpPa04_RS10095 bc641babc070b30c1470d23c8d59342f 239 Gene3D G3DSA:3.20.20.190 2 237 2.1E-56 T 10-03-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CpPa04_RS10095 bc641babc070b30c1470d23c8d59342f 239 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 230 7.2E-31 T 10-03-2017 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CpPa04_RS07905 19545ce287ae80bf716a44f61d9d47df 581 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 411 578 1.6E-15 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS07905 19545ce287ae80bf716a44f61d9d47df 581 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 136 316 2.3E-18 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS07905 19545ce287ae80bf716a44f61d9d47df 581 SUPERFAMILY SSF161098 387 566 1.57E-14 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS07905 19545ce287ae80bf716a44f61d9d47df 581 Gene3D G3DSA:1.10.3720.10 384 580 4.4E-12 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS07905 19545ce287ae80bf716a44f61d9d47df 581 Gene3D G3DSA:1.10.3720.10 99 310 1.4E-5 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS09770 57c738a73d59c73b21d8076d5c47ba12 100 PIRSF PIRSF001223 1 100 1.6E-53 T 10-03-2017 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CpPa04_RS09770 57c738a73d59c73b21d8076d5c47ba12 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 35.124 T 10-03-2017 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CpPa04_RS09770 57c738a73d59c73b21d8076d5c47ba12 100 Pfam PF00547 Urease, gamma subunit 1 99 6.4E-48 T 10-03-2017 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CpPa04_RS09770 57c738a73d59c73b21d8076d5c47ba12 100 SUPERFAMILY SSF54111 1 100 3.14E-46 T 10-03-2017 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CpPa04_RS09770 57c738a73d59c73b21d8076d5c47ba12 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 4.0E-38 T 10-03-2017 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CpPa04_RS09770 57c738a73d59c73b21d8076d5c47ba12 100 Gene3D G3DSA:3.30.280.10 1 100 1.3E-49 T 10-03-2017 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CpPa04_RS09770 57c738a73d59c73b21d8076d5c47ba12 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 100 4.1E-50 T 10-03-2017 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CpPa04_RS10490 aa47239e4c486dae8c6ad644262f0a3e 277 SUPERFAMILY SSF52540 21 269 5.76E-70 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS10490 aa47239e4c486dae8c6ad644262f0a3e 277 Pfam PF00005 ABC transporter 48 198 3.9E-36 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS10490 aa47239e4c486dae8c6ad644262f0a3e 277 ProSitePatterns PS00211 ABC transporters family signature. 170 184 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS10490 aa47239e4c486dae8c6ad644262f0a3e 277 SMART SM00382 56 247 8.3E-20 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS10490 aa47239e4c486dae8c6ad644262f0a3e 277 Gene3D G3DSA:3.40.50.300 20 271 1.5E-77 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00940 89ebad282db802800f6724d7d6112732 333 Pfam PF13343 Bacterial extracellular solute-binding protein 95 295 3.4E-18 T 10-03-2017 CpPa04_RS00940 89ebad282db802800f6724d7d6112732 333 Gene3D G3DSA:3.40.190.10 128 265 1.4E-20 T 10-03-2017 CpPa04_RS00940 89ebad282db802800f6724d7d6112732 333 Gene3D G3DSA:3.40.190.10 8 125 2.9E-16 T 10-03-2017 CpPa04_RS00940 89ebad282db802800f6724d7d6112732 333 Gene3D G3DSA:3.40.190.10 266 324 2.9E-16 T 10-03-2017 CpPa04_RS00940 89ebad282db802800f6724d7d6112732 333 SUPERFAMILY SSF53850 31 327 1.69E-43 T 10-03-2017 CpPa04_RS05505 956dd29bfbb731983126d861258e8e26 454 Pfam PF05167 Uncharacterised ACR (DUF711) 16 418 9.1E-173 T 10-03-2017 IPR007841 Uncharacterised protein family UPF0210 CpPa04_RS05505 956dd29bfbb731983126d861258e8e26 454 SUPERFAMILY SSF51998 7 449 4.76E-172 T 10-03-2017 CpPa04_RS05505 956dd29bfbb731983126d861258e8e26 454 Hamap MF_01221 UPF0210 protein . 5 454 51.023 T 10-03-2017 IPR007841 Uncharacterised protein family UPF0210 CpPa04_RS05505 956dd29bfbb731983126d861258e8e26 454 Gene3D G3DSA:3.20.70.20 7 454 9.5E-205 T 10-03-2017 CpPa04_RS00840 e30a080824f35decffcecebd23e2db20 459 Gene3D G3DSA:1.20.1250.20 25 200 1.3E-17 T 10-03-2017 CpPa04_RS00840 e30a080824f35decffcecebd23e2db20 459 Gene3D G3DSA:1.20.1250.20 267 448 2.9E-15 T 10-03-2017 CpPa04_RS00840 e30a080824f35decffcecebd23e2db20 459 Pfam PF07690 Major Facilitator Superfamily 31 407 1.4E-31 T 10-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CpPa04_RS00840 e30a080824f35decffcecebd23e2db20 459 SUPERFAMILY SSF103473 22 205 1.44E-42 T 10-03-2017 IPR020846 Major facilitator superfamily domain CpPa04_RS00840 e30a080824f35decffcecebd23e2db20 459 SUPERFAMILY SSF103473 248 450 1.44E-42 T 10-03-2017 IPR020846 Major facilitator superfamily domain CpPa04_RS00840 e30a080824f35decffcecebd23e2db20 459 PRINTS PR01036 Tetracycline resistance protein TetB signature 302 326 2.5E-28 T 10-03-2017 CpPa04_RS00840 e30a080824f35decffcecebd23e2db20 459 PRINTS PR01036 Tetracycline resistance protein TetB signature 174 198 2.5E-28 T 10-03-2017 CpPa04_RS00840 e30a080824f35decffcecebd23e2db20 459 PRINTS PR01036 Tetracycline resistance protein TetB signature 212 230 2.5E-28 T 10-03-2017 CpPa04_RS00840 e30a080824f35decffcecebd23e2db20 459 PRINTS PR01036 Tetracycline resistance protein TetB signature 87 109 2.5E-28 T 10-03-2017 CpPa04_RS00840 e30a080824f35decffcecebd23e2db20 459 PRINTS PR01036 Tetracycline resistance protein TetB signature 399 418 2.5E-28 T 10-03-2017 CpPa04_RS00840 e30a080824f35decffcecebd23e2db20 459 PRINTS PR01036 Tetracycline resistance protein TetB signature 119 139 2.5E-28 T 10-03-2017 CpPa04_RS00840 e30a080824f35decffcecebd23e2db20 459 PRINTS PR01036 Tetracycline resistance protein TetB signature 233 251 2.5E-28 T 10-03-2017 CpPa04_RS00840 e30a080824f35decffcecebd23e2db20 459 PRINTS PR01036 Tetracycline resistance protein TetB signature 267 292 2.5E-28 T 10-03-2017 CpPa04_RS09825 72358e6d82a6078f284a4ddc3cb79bc8 463 Pfam PF00171 Aldehyde dehydrogenase family 3 454 4.1E-139 T 10-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CpPa04_RS09825 72358e6d82a6078f284a4ddc3cb79bc8 463 Gene3D G3DSA:3.40.605.10 3 244 2.7E-73 T 10-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CpPa04_RS09825 72358e6d82a6078f284a4ddc3cb79bc8 463 Gene3D G3DSA:3.40.309.10 245 429 3.3E-61 T 10-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CpPa04_RS09825 72358e6d82a6078f284a4ddc3cb79bc8 463 SUPERFAMILY SSF53720 4 456 4.19E-140 T 10-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CpPa04_RS02810 2bd8ad55f57a6dfdfabeac47b9440c34 273 Pfam PF07751 Abi-like protein 31 240 3.5E-19 T 10-03-2017 IPR011664 Abortive infection system protein AbiD/AbiF-like CpPa04_RS00610 fc47e17da4a902e5442891f55582b824 343 Gene3D G3DSA:3.40.640.10 35 251 1.4E-68 T 10-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CpPa04_RS00610 fc47e17da4a902e5442891f55582b824 343 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 1 342 47.585 T 10-03-2017 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CpPa04_RS00610 fc47e17da4a902e5442891f55582b824 343 SUPERFAMILY SSF53383 15 338 3.58E-76 T 10-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase CpPa04_RS00610 fc47e17da4a902e5442891f55582b824 343 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 3 338 2.1E-85 T 10-03-2017 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CpPa04_RS00610 fc47e17da4a902e5442891f55582b824 343 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 209 218 - T 10-03-2017 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CpPa04_RS00610 fc47e17da4a902e5442891f55582b824 343 Pfam PF00155 Aminotransferase class I and II 21 336 3.6E-48 T 10-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CpPa04_RS00610 fc47e17da4a902e5442891f55582b824 343 Gene3D G3DSA:3.90.1150.10 252 338 5.0E-6 T 10-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CpPa04_RS00610 fc47e17da4a902e5442891f55582b824 343 Hamap MF_01513 Putative phenylalanine aminotransferase [pat]. 2 343 43.821 T 10-03-2017 IPR024892 Putative phenylalanine aminotransferase CpPa04_RS10135 658b68a55c52987cf605571c376cc646 403 Gene3D G3DSA:1.20.1250.20 227 399 1.2E-7 T 10-03-2017 CpPa04_RS10135 658b68a55c52987cf605571c376cc646 403 Gene3D G3DSA:1.20.1250.20 23 206 4.2E-29 T 10-03-2017 CpPa04_RS10135 658b68a55c52987cf605571c376cc646 403 Pfam PF07690 Major Facilitator Superfamily 33 241 1.9E-24 T 10-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CpPa04_RS10135 658b68a55c52987cf605571c376cc646 403 SUPERFAMILY SSF103473 20 400 7.59E-54 T 10-03-2017 IPR020846 Major facilitator superfamily domain CpPa04_RS02255 a72e1c9313c54930260743583c10709e 318 PRINTS PR00690 Adhesin family signature 250 268 8.1E-24 T 10-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 CpPa04_RS02255 a72e1c9313c54930260743583c10709e 318 PRINTS PR00690 Adhesin family signature 34 52 8.1E-24 T 10-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 CpPa04_RS02255 a72e1c9313c54930260743583c10709e 318 PRINTS PR00690 Adhesin family signature 276 295 8.1E-24 T 10-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 CpPa04_RS02255 a72e1c9313c54930260743583c10709e 318 PRINTS PR00690 Adhesin family signature 77 94 8.1E-24 T 10-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 CpPa04_RS02255 a72e1c9313c54930260743583c10709e 318 PRINTS PR00690 Adhesin family signature 195 216 8.1E-24 T 10-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 CpPa04_RS02255 a72e1c9313c54930260743583c10709e 318 Gene3D G3DSA:3.40.50.1980 19 187 2.4E-45 T 10-03-2017 CpPa04_RS02255 a72e1c9313c54930260743583c10709e 318 PRINTS PR00691 Adhesin B signature 268 286 3.0E-21 T 10-03-2017 IPR006129 Adhesin B GO:0007155 CpPa04_RS02255 a72e1c9313c54930260743583c10709e 318 PRINTS PR00691 Adhesin B signature 137 156 3.0E-21 T 10-03-2017 IPR006129 Adhesin B GO:0007155 CpPa04_RS02255 a72e1c9313c54930260743583c10709e 318 PRINTS PR00691 Adhesin B signature 246 263 3.0E-21 T 10-03-2017 IPR006129 Adhesin B GO:0007155 CpPa04_RS02255 a72e1c9313c54930260743583c10709e 318 PRINTS PR00691 Adhesin B signature 195 212 3.0E-21 T 10-03-2017 IPR006129 Adhesin B GO:0007155 CpPa04_RS02255 a72e1c9313c54930260743583c10709e 318 PRINTS PR00691 Adhesin B signature 77 96 3.0E-21 T 10-03-2017 IPR006129 Adhesin B GO:0007155 CpPa04_RS02255 a72e1c9313c54930260743583c10709e 318 PRINTS PR00691 Adhesin B signature 34 55 3.0E-21 T 10-03-2017 IPR006129 Adhesin B GO:0007155 CpPa04_RS02255 a72e1c9313c54930260743583c10709e 318 Pfam PF01297 Zinc-uptake complex component A periplasmic 37 304 2.8E-71 T 10-03-2017 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CpPa04_RS02255 a72e1c9313c54930260743583c10709e 318 Gene3D G3DSA:3.40.50.1980 188 306 1.1E-35 T 10-03-2017 CpPa04_RS02255 a72e1c9313c54930260743583c10709e 318 SUPERFAMILY SSF53807 16 306 9.81E-69 T 10-03-2017 CpPa04_RS08510 e266669ae2d22c5806024de5d9e283fd 132 SMART SM00418 22 100 1.4E-23 T 10-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CpPa04_RS08510 e266669ae2d22c5806024de5d9e283fd 132 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 54 2.6E-10 T 10-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CpPa04_RS08510 e266669ae2d22c5806024de5d9e283fd 132 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 71 86 2.6E-10 T 10-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CpPa04_RS08510 e266669ae2d22c5806024de5d9e283fd 132 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 24 39 2.6E-10 T 10-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CpPa04_RS08510 e266669ae2d22c5806024de5d9e283fd 132 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 2.6E-10 T 10-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CpPa04_RS08510 e266669ae2d22c5806024de5d9e283fd 132 Gene3D G3DSA:1.10.10.10 11 99 1.8E-25 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS08510 e266669ae2d22c5806024de5d9e283fd 132 SUPERFAMILY SSF46785 8 97 9.58E-22 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS08510 e266669ae2d22c5806024de5d9e283fd 132 Pfam PF01022 Bacterial regulatory protein, arsR family 29 68 9.1E-13 T 10-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CpPa04_RS07485 e9228de232e0918139420ea436c795e5 177 Gene3D G3DSA:3.90.79.10 10 160 4.4E-28 T 10-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CpPa04_RS07485 e9228de232e0918139420ea436c795e5 177 SUPERFAMILY SSF55811 12 157 6.09E-24 T 10-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CpPa04_RS07485 e9228de232e0918139420ea436c795e5 177 Pfam PF00293 NUDIX domain 43 144 6.8E-14 T 10-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 CpPa04_RS04435 07f0cfcee9d3db0d93b5488b37c58511 164 Pfam PF00583 Acetyltransferase (GNAT) family 91 146 7.9E-11 T 10-03-2017 IPR000182 GNAT domain GO:0008080 CpPa04_RS04435 07f0cfcee9d3db0d93b5488b37c58511 164 SUPERFAMILY SSF55729 6 150 2.27E-18 T 10-03-2017 IPR016181 Acyl-CoA N-acyltransferase CpPa04_RS04435 07f0cfcee9d3db0d93b5488b37c58511 164 Gene3D G3DSA:3.40.630.30 48 150 9.3E-19 T 10-03-2017 IPR016181 Acyl-CoA N-acyltransferase CpPa04_RS09290 b0d9a2cf8ffe651a0d4b3208c6fec24c 255 SUPERFAMILY SSF56219 1 253 2.49E-60 T 10-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase CpPa04_RS09290 b0d9a2cf8ffe651a0d4b3208c6fec24c 255 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 246 5.4E-17 T 10-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase CpPa04_RS09290 b0d9a2cf8ffe651a0d4b3208c6fec24c 255 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 252 9.3E-61 T 10-03-2017 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CpPa04_RS09290 b0d9a2cf8ffe651a0d4b3208c6fec24c 255 Gene3D G3DSA:3.60.10.10 1 253 3.4E-66 T 10-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase CpPa04_RS03370 e41a66d08eba05f3702adbb45617419b 199 Gene3D G3DSA:3.40.980.10 43 195 2.6E-35 T 10-03-2017 IPR001453 MoaB/Mog domain CpPa04_RS03370 e41a66d08eba05f3702adbb45617419b 199 SUPERFAMILY SSF53218 43 194 6.15E-27 T 10-03-2017 IPR001453 MoaB/Mog domain CpPa04_RS03370 e41a66d08eba05f3702adbb45617419b 199 SMART SM00852 48 189 2.9E-10 T 10-03-2017 IPR001453 MoaB/Mog domain CpPa04_RS03370 e41a66d08eba05f3702adbb45617419b 199 Pfam PF00994 Probable molybdopterin binding domain 49 188 2.9E-19 T 10-03-2017 IPR001453 MoaB/Mog domain CpPa04_RS03835 772f33de47d765ec0797aa12634b0c2d 204 PIRSF PIRSF037394 8 204 2.7E-70 T 10-03-2017 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted CpPa04_RS03835 772f33de47d765ec0797aa12634b0c2d 204 Pfam PF09819 ABC-type cobalt transport system, permease component 18 139 1.6E-38 T 10-03-2017 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted CpPa04_RS10570 b1c68ce4e5cd374e2105db731f6669d5 535 Pfam PF00425 chorismate binding enzyme 238 514 1.8E-79 T 10-03-2017 IPR015890 Chorismate-utilising enzyme, C-terminal CpPa04_RS10570 b1c68ce4e5cd374e2105db731f6669d5 535 SUPERFAMILY SSF56322 7 522 1.09E-128 T 10-03-2017 IPR005801 ADC synthase GO:0009058 CpPa04_RS10570 b1c68ce4e5cd374e2105db731f6669d5 535 Gene3D G3DSA:3.60.120.10 6 526 5.1E-135 T 10-03-2017 IPR005801 ADC synthase GO:0009058 CpPa04_RS10570 b1c68ce4e5cd374e2105db731f6669d5 535 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 16 525 3.4E-160 T 10-03-2017 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CpPa04_RS10570 b1c68ce4e5cd374e2105db731f6669d5 535 Pfam PF04715 Anthranilate synthase component I, N terminal region 20 191 3.0E-7 T 10-03-2017 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CpPa04_RS10570 b1c68ce4e5cd374e2105db731f6669d5 535 PRINTS PR00095 Anthranilate synthase component I signature 362 375 2.8E-21 T 10-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CpPa04_RS10570 b1c68ce4e5cd374e2105db731f6669d5 535 PRINTS PR00095 Anthranilate synthase component I signature 456 470 2.8E-21 T 10-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CpPa04_RS10570 b1c68ce4e5cd374e2105db731f6669d5 535 PRINTS PR00095 Anthranilate synthase component I signature 376 389 2.8E-21 T 10-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CpPa04_RS10570 b1c68ce4e5cd374e2105db731f6669d5 535 PRINTS PR00095 Anthranilate synthase component I signature 471 485 2.8E-21 T 10-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CpPa04_RS10015 847f7d220627cc119ab74e6b18db3267 675 Pfam PF08310 LGFP repeat 581 636 4.8E-8 T 10-03-2017 IPR013207 LGFP CpPa04_RS10015 847f7d220627cc119ab74e6b18db3267 675 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 277 429 1.6E-8 T 10-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 CpPa04_RS10015 847f7d220627cc119ab74e6b18db3267 675 SMART SM00644 265 429 0.0016 T 10-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 CpPa04_RS10015 847f7d220627cc119ab74e6b18db3267 675 Gene3D G3DSA:3.40.80.10 244 448 2.0E-46 T 10-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 CpPa04_RS10015 847f7d220627cc119ab74e6b18db3267 675 SUPERFAMILY SSF55846 252 442 8.11E-45 T 10-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 CpPa04_RS10015 847f7d220627cc119ab74e6b18db3267 675 SMART SM00701 252 400 5.3E-35 T 10-03-2017 IPR006619 Peptidoglycan recognition protein family domain, metazoa/bacteria GO:0008270|GO:0008745|GO:0009253 CpPa04_RS06540 e356ce41697fb51ff0dd06494ec224b5 371 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 210 2.5E-51 T 10-03-2017 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CpPa04_RS06540 e356ce41697fb51ff0dd06494ec224b5 371 SMART SM00833 266 357 2.5E-25 T 10-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CpPa04_RS06540 e356ce41697fb51ff0dd06494ec224b5 371 Gene3D G3DSA:3.40.50.300 6 221 7.1E-64 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06540 e356ce41697fb51ff0dd06494ec224b5 371 Gene3D G3DSA:3.30.1220.10 254 355 4.2E-13 T 10-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CpPa04_RS06540 e356ce41697fb51ff0dd06494ec224b5 371 SUPERFAMILY SSF52540 5 325 3.72E-35 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06540 e356ce41697fb51ff0dd06494ec224b5 371 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 266 356 5.6E-20 T 10-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CpPa04_RS09430 c707721f4f23a6be56fdc3d129a40025 375 SUPERFAMILY SSF50494 60 208 2.33E-13 T 10-03-2017 IPR009003 Peptidase S1, PA clan CpPa04_RS01435 8fa07c958b365edaffa42dcd138c7683 441 Gene3D G3DSA:3.40.640.10 82 325 2.4E-73 T 10-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CpPa04_RS01435 8fa07c958b365edaffa42dcd138c7683 441 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 245 281 - T 10-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CpPa04_RS01435 8fa07c958b365edaffa42dcd138c7683 441 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 15 435 95.844 T 10-03-2017 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CpPa04_RS01435 8fa07c958b365edaffa42dcd138c7683 441 Gene3D G3DSA:3.90.1150.10 329 431 7.4E-38 T 10-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CpPa04_RS01435 8fa07c958b365edaffa42dcd138c7683 441 Gene3D G3DSA:3.90.1150.10 13 81 7.4E-38 T 10-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CpPa04_RS01435 8fa07c958b365edaffa42dcd138c7683 441 Pfam PF00202 Aminotransferase class-III 46 428 6.5E-78 T 10-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CpPa04_RS01435 8fa07c958b365edaffa42dcd138c7683 441 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 16 430 4.9E-175 T 10-03-2017 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CpPa04_RS01435 8fa07c958b365edaffa42dcd138c7683 441 SUPERFAMILY SSF53383 13 431 1.95E-115 T 10-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase CpPa04_RS03120 ed9d92e30b8691601d2ae9a763cc6299 272 SUPERFAMILY SSF56601 88 239 1.83E-10 T 10-03-2017 IPR012338 Beta-lactamase/transpeptidase-like CpPa04_RS10105 af7d69c170483af45f64bef5d595a36b 156 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 25 155 3.0E-34 T 10-03-2017 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-73614 CpPa04_RS10105 af7d69c170483af45f64bef5d595a36b 156 SUPERFAMILY SSF53927 22 156 2.51E-37 T 10-03-2017 IPR016193 Cytidine deaminase-like GO:0003824 CpPa04_RS10105 af7d69c170483af45f64bef5d595a36b 156 Gene3D G3DSA:3.40.140.10 21 156 1.6E-42 T 10-03-2017 CpPa04_RS10105 af7d69c170483af45f64bef5d595a36b 156 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 24 132 7.6E-15 T 10-03-2017 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 CpPa04_RS04410 ef43674ef6c1b9d56e857c679b273ffb 232 Pfam PF00929 Exonuclease 18 174 1.3E-12 T 10-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III CpPa04_RS04410 ef43674ef6c1b9d56e857c679b273ffb 232 Gene3D G3DSA:3.30.420.10 12 185 4.6E-31 T 10-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CpPa04_RS04410 ef43674ef6c1b9d56e857c679b273ffb 232 SUPERFAMILY SSF53098 15 184 1.8E-36 T 10-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CpPa04_RS04410 ef43674ef6c1b9d56e857c679b273ffb 232 SMART SM00479 15 184 3.2E-13 T 10-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III CpPa04_RS04920 b115d5392e6ad1cb4c912174d4b81f82 317 Pfam PF11382 Copper transport outer membrane protein, MctB 9 310 9.3E-83 T 10-03-2017 IPR021522 Copper transporter MctB GO:0006810 CpPa04_RS10700 4c4adbabbbf3642097852b5b9ff7367b 95 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 24 93 23.015 T 10-03-2017 IPR002696 Putative membrane protein insertion efficiency factor CpPa04_RS10700 4c4adbabbbf3642097852b5b9ff7367b 95 SMART SM01234 24 92 2.3E-36 T 10-03-2017 IPR002696 Putative membrane protein insertion efficiency factor CpPa04_RS10700 4c4adbabbbf3642097852b5b9ff7367b 95 Pfam PF01809 Haemolytic domain 28 92 3.2E-26 T 10-03-2017 IPR002696 Putative membrane protein insertion efficiency factor CpPa04_RS10700 4c4adbabbbf3642097852b5b9ff7367b 95 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 39 92 1.0E-17 T 10-03-2017 IPR002696 Putative membrane protein insertion efficiency factor CpPa04_RS10700 4c4adbabbbf3642097852b5b9ff7367b 95 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 31 94 1.6E-22 T 10-03-2017 IPR002696 Putative membrane protein insertion efficiency factor CpPa04_RS08900 fff4a24883a8db64da9f1e4dd9a24cd6 578 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 381 527 1.7E-35 T 10-03-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CpPa04_RS08900 fff4a24883a8db64da9f1e4dd9a24cd6 578 Gene3D G3DSA:3.40.50.1220 186 338 5.2E-36 T 10-03-2017 IPR029035 DHS-like NAD/FAD-binding domain CpPa04_RS08900 fff4a24883a8db64da9f1e4dd9a24cd6 578 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 170 1.1E-37 T 10-03-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CpPa04_RS08900 fff4a24883a8db64da9f1e4dd9a24cd6 578 SUPERFAMILY SSF52518 2 171 8.03E-39 T 10-03-2017 IPR029061 Thiamin diphosphate-binding fold CpPa04_RS08900 fff4a24883a8db64da9f1e4dd9a24cd6 578 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 317 2.2E-26 T 10-03-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CpPa04_RS08900 fff4a24883a8db64da9f1e4dd9a24cd6 578 Gene3D G3DSA:3.40.50.970 3 172 5.2E-45 T 10-03-2017 IPR029061 Thiamin diphosphate-binding fold CpPa04_RS08900 fff4a24883a8db64da9f1e4dd9a24cd6 578 SUPERFAMILY SSF52467 182 344 4.3E-37 T 10-03-2017 IPR029035 DHS-like NAD/FAD-binding domain CpPa04_RS08900 fff4a24883a8db64da9f1e4dd9a24cd6 578 SUPERFAMILY SSF52518 358 541 2.95E-53 T 10-03-2017 IPR029061 Thiamin diphosphate-binding fold CpPa04_RS08900 fff4a24883a8db64da9f1e4dd9a24cd6 578 Gene3D G3DSA:3.40.50.970 354 546 9.1E-53 T 10-03-2017 IPR029061 Thiamin diphosphate-binding fold CpPa04_RS00810 0a2130bcc820a414741177dde6df5e28 431 Gene3D G3DSA:3.40.1190.10 42 299 1.4E-40 T 10-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CpPa04_RS00810 0a2130bcc820a414741177dde6df5e28 431 SUPERFAMILY SSF53623 51 192 1.7E-29 T 10-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CpPa04_RS00810 0a2130bcc820a414741177dde6df5e28 431 SUPERFAMILY SSF53623 240 294 1.7E-29 T 10-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CpPa04_RS00810 0a2130bcc820a414741177dde6df5e28 431 Pfam PF08353 Domain of unknown function (DUF1727) 319 418 2.1E-24 T 10-03-2017 IPR013564 Domain of unknown function DUF1727 CpPa04_RS00810 0a2130bcc820a414741177dde6df5e28 431 Pfam PF08245 Mur ligase middle domain 57 180 1.6E-14 T 10-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CpPa04_RS06740 1affd0ce1d3a6a6b502d309556c43c29 154 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 22.783 T 10-03-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS06740 1affd0ce1d3a6a6b502d309556c43c29 154 Pfam PF00886 Ribosomal protein S16 9 67 1.0E-23 T 10-03-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS06740 1affd0ce1d3a6a6b502d309556c43c29 154 Gene3D G3DSA:3.30.1320.10 2 83 5.0E-32 T 10-03-2017 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS06740 1affd0ce1d3a6a6b502d309556c43c29 154 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 79 2.1E-30 T 10-03-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS06740 1affd0ce1d3a6a6b502d309556c43c29 154 SUPERFAMILY SSF54565 2 92 6.67E-33 T 10-03-2017 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS07845 3ba60f80922fcc5301dfeac683e6323e 395 Pfam PF01844 HNH endonuclease 301 326 4.6E-6 T 10-03-2017 IPR002711 HNH endonuclease GO:0003676|GO:0004519 CpPa04_RS07845 3ba60f80922fcc5301dfeac683e6323e 395 SMART SM00507 276 329 1.1E-4 T 10-03-2017 IPR003615 HNH nuclease CpPa04_RS01460 3de405a92019a1d76e175e52f1237615 253 SUPERFAMILY SSF53335 17 203 2.13E-28 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS01460 3de405a92019a1d76e175e52f1237615 253 Pfam PF13649 Methyltransferase domain 43 141 6.3E-16 T 10-03-2017 CpPa04_RS01460 3de405a92019a1d76e175e52f1237615 253 Gene3D G3DSA:3.40.50.150 196 209 5.6E-25 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS01460 3de405a92019a1d76e175e52f1237615 253 Gene3D G3DSA:3.40.50.150 15 153 5.6E-25 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS10660 6d3e3d25f75edf52aef38abf2678aecd 315 Gene3D G3DSA:3.50.50.60 114 301 3.3E-36 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS10660 6d3e3d25f75edf52aef38abf2678aecd 315 Gene3D G3DSA:3.50.50.60 10 113 1.2E-35 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS10660 6d3e3d25f75edf52aef38abf2678aecd 315 SUPERFAMILY SSF51905 5 310 7.9E-55 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS10660 6d3e3d25f75edf52aef38abf2678aecd 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 200 216 1.9E-76 T 10-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CpPa04_RS10660 6d3e3d25f75edf52aef38abf2678aecd 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 45 60 1.9E-76 T 10-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CpPa04_RS10660 6d3e3d25f75edf52aef38abf2678aecd 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 133 145 1.9E-76 T 10-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CpPa04_RS10660 6d3e3d25f75edf52aef38abf2678aecd 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 12 34 1.9E-76 T 10-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CpPa04_RS10660 6d3e3d25f75edf52aef38abf2678aecd 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 111 119 1.9E-76 T 10-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CpPa04_RS10660 6d3e3d25f75edf52aef38abf2678aecd 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 148 172 1.9E-76 T 10-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CpPa04_RS10660 6d3e3d25f75edf52aef38abf2678aecd 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 66 76 1.9E-76 T 10-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CpPa04_RS10660 6d3e3d25f75edf52aef38abf2678aecd 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 273 291 1.9E-76 T 10-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CpPa04_RS10660 6d3e3d25f75edf52aef38abf2678aecd 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 1.9E-76 T 10-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CpPa04_RS10660 6d3e3d25f75edf52aef38abf2678aecd 315 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 299 3.2E-48 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS10660 6d3e3d25f75edf52aef38abf2678aecd 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 285 5.5E-38 T 10-03-2017 CpPa04_RS10660 6d3e3d25f75edf52aef38abf2678aecd 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 110 128 5.5E-38 T 10-03-2017 CpPa04_RS10660 6d3e3d25f75edf52aef38abf2678aecd 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 13 32 5.5E-38 T 10-03-2017 CpPa04_RS10660 6d3e3d25f75edf52aef38abf2678aecd 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 5.5E-38 T 10-03-2017 CpPa04_RS10660 6d3e3d25f75edf52aef38abf2678aecd 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 5.5E-38 T 10-03-2017 CpPa04_RS10660 6d3e3d25f75edf52aef38abf2678aecd 315 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 11 310 2.4E-119 T 10-03-2017 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 CpPa04_RS10660 6d3e3d25f75edf52aef38abf2678aecd 315 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 140 160 - T 10-03-2017 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CpPa04_RS08205 f30280edcc98cba23c2dddf3db3bd014 337 Pfam PF14028 Lantibiotic biosynthesis dehydratase C-term 7 334 4.9E-88 T 10-03-2017 IPR023809 Thiopeptide-type bacteriocin biosynthesis domain CpPa04_RS08205 f30280edcc98cba23c2dddf3db3bd014 337 TIGRFAM TIGR03891 thiopep_ocin: thiopeptide-type bacteriocin biosynthesis domain 134 333 2.5E-14 T 10-03-2017 IPR023809 Thiopeptide-type bacteriocin biosynthesis domain CpPa04_RS03095 2ea03f72a77d877577d018996eff4927 206 SUPERFAMILY SSF49329 53 203 1.7E-43 T 10-03-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CpPa04_RS03095 2ea03f72a77d877577d018996eff4927 206 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 61 203 1.6E-36 T 10-03-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CpPa04_RS03095 2ea03f72a77d877577d018996eff4927 206 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 92 114 1.6E-7 T 10-03-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CpPa04_RS03095 2ea03f72a77d877577d018996eff4927 206 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 178 204 1.6E-7 T 10-03-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CpPa04_RS03095 2ea03f72a77d877577d018996eff4927 206 Gene3D G3DSA:2.60.40.200 53 203 3.2E-47 T 10-03-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CpPa04_RS03095 2ea03f72a77d877577d018996eff4927 206 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 192 203 - T 10-03-2017 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CpPa04_RS08080 8a9458315381254fcf45ed48280cb93e 252 SUPERFAMILY SSF46689 17 86 4.41E-15 T 10-03-2017 IPR009057 Homeodomain-like GO:0003677 CpPa04_RS08080 8a9458315381254fcf45ed48280cb93e 252 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 5.8E-8 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS08080 8a9458315381254fcf45ed48280cb93e 252 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 5.8E-8 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS08080 8a9458315381254fcf45ed48280cb93e 252 Gene3D G3DSA:1.10.357.10 71 211 4.8E-18 T 10-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CpPa04_RS08080 8a9458315381254fcf45ed48280cb93e 252 SUPERFAMILY SSF48498 92 214 1.17E-20 T 10-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CpPa04_RS08080 8a9458315381254fcf45ed48280cb93e 252 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 69 3.1E-11 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS08080 8a9458315381254fcf45ed48280cb93e 252 Gene3D G3DSA:1.10.10.60 18 70 1.0E-15 T 10-03-2017 IPR009057 Homeodomain-like GO:0003677 CpPa04_RS01855 a37148dee4065de84bc70984baf4c458 107 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 107 1.6E-34 T 10-03-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS01855 a37148dee4065de84bc70984baf4c458 107 Gene3D G3DSA:2.30.30.30 1 96 2.4E-25 T 10-03-2017 IPR014722 Ribosomal protein L2 domain 2 CpPa04_RS01855 a37148dee4065de84bc70984baf4c458 107 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 101 20.25 T 10-03-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS01855 a37148dee4065de84bc70984baf4c458 107 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 41 107 2.1E-24 T 10-03-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS01855 a37148dee4065de84bc70984baf4c458 107 SUPERFAMILY SSF50104 1 102 3.76E-28 T 10-03-2017 IPR008991 Translation protein SH3-like domain CpPa04_RS01855 a37148dee4065de84bc70984baf4c458 107 Pfam PF00467 KOW motif 5 38 3.7E-5 T 10-03-2017 IPR005824 KOW CpPa04_RS06325 ed75dcc4110464dcd9f6c960cfc92f40 311 SUPERFAMILY SSF52540 17 161 2.64E-18 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06325 ed75dcc4110464dcd9f6c960cfc92f40 311 Pfam PF01715 IPP transferase 49 293 7.1E-72 T 10-03-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CpPa04_RS06325 ed75dcc4110464dcd9f6c960cfc92f40 311 Gene3D G3DSA:3.40.50.300 15 181 7.0E-53 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06325 ed75dcc4110464dcd9f6c960cfc92f40 311 Gene3D G3DSA:1.10.287.890 210 290 2.8E-23 T 10-03-2017 CpPa04_RS06325 ed75dcc4110464dcd9f6c960cfc92f40 311 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 17 300 1.2E-78 T 10-03-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CpPa04_RS06325 ed75dcc4110464dcd9f6c960cfc92f40 311 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 16 308 26.529 T 10-03-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CpPa04_RS05605 002d3aeeb18cde34079b14bda31c8d47 319 Pfam PF10128 Glucose-6-phosphate dehydrogenase subunit 55 308 3.4E-85 T 10-03-2017 IPR004555 Glucose-6-phosphate dehydrogenase assembly protein OpcA CpPa04_RS10025 168112e89cbe9270debcfd318a59bfde 282 SMART SM00563 64 179 6.1E-36 T 10-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CpPa04_RS10025 168112e89cbe9270debcfd318a59bfde 282 SUPERFAMILY SSF69593 11 232 1.26E-36 T 10-03-2017 CpPa04_RS10025 168112e89cbe9270debcfd318a59bfde 282 Gene3D G3DSA:3.40.1130.10 51 219 8.5E-20 T 10-03-2017 CpPa04_RS10025 168112e89cbe9270debcfd318a59bfde 282 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 48 176 2.0E-30 T 10-03-2017 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 CpPa04_RS10025 168112e89cbe9270debcfd318a59bfde 282 Pfam PF01553 Acyltransferase 50 176 2.4E-32 T 10-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CpPa04_RS08395 2c8a4ee961f3d3929ec1875230d210d0 255 Pfam PF12706 Beta-lactamase superfamily domain 32 223 6.8E-18 T 10-03-2017 IPR001279 Metallo-beta-lactamase CpPa04_RS08395 2c8a4ee961f3d3929ec1875230d210d0 255 Gene3D G3DSA:3.60.15.10 1 254 8.6E-51 T 10-03-2017 IPR001279 Metallo-beta-lactamase CpPa04_RS08395 2c8a4ee961f3d3929ec1875230d210d0 255 SUPERFAMILY SSF56281 1 255 3.66E-46 T 10-03-2017 IPR001279 Metallo-beta-lactamase CpPa04_RS07045 cf412a29943b26ea1c6134dc23048a3a 98 Pfam PF02325 YGGT family 11 91 1.0E-12 T 10-03-2017 IPR003425 CCB3/YggT GO:0016020 CpPa04_RS05890 9a985a00efd6188427734b8cde1797ed 300 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 38 244 7.2E-23 T 10-03-2017 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CpPa04_RS05890 9a985a00efd6188427734b8cde1797ed 300 PIRSF PIRSF015582 16 299 1.2E-62 T 10-03-2017 IPR011206 Citrate lyase beta subunit-like CpPa04_RS05890 9a985a00efd6188427734b8cde1797ed 300 Gene3D G3DSA:3.20.20.60 37 256 2.7E-58 T 10-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CpPa04_RS05890 9a985a00efd6188427734b8cde1797ed 300 SUPERFAMILY SSF51621 37 256 5.93E-48 T 10-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CpPa04_RS00640 0b91f8a7defb3d390d195c1f87adf0ca 527 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 455 472 - T 10-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CpPa04_RS00640 0b91f8a7defb3d390d195c1f87adf0ca 527 Pfam PF00367 phosphotransferase system, EIIB 445 477 1.5E-12 T 10-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CpPa04_RS00640 0b91f8a7defb3d390d195c1f87adf0ca 527 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 416 502 1.2E-17 T 10-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CpPa04_RS00640 0b91f8a7defb3d390d195c1f87adf0ca 527 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 7 512 4.2E-181 T 10-03-2017 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 CpPa04_RS00640 0b91f8a7defb3d390d195c1f87adf0ca 527 Pfam PF02378 Phosphotransferase system, EIIC 13 355 1.1E-70 T 10-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CpPa04_RS00640 0b91f8a7defb3d390d195c1f87adf0ca 527 SUPERFAMILY SSF55604 442 515 1.44E-19 T 10-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CpPa04_RS00640 0b91f8a7defb3d390d195c1f87adf0ca 527 Gene3D G3DSA:3.30.1360.60 439 516 1.4E-26 T 10-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CpPa04_RS00135 6011f1413aa3a86dcc8738350253ba1c 288 Pfam PF00005 ABC transporter 42 188 5.7E-30 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS00135 6011f1413aa3a86dcc8738350253ba1c 288 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS00135 6011f1413aa3a86dcc8738350253ba1c 288 Gene3D G3DSA:3.40.50.300 21 254 5.5E-63 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00135 6011f1413aa3a86dcc8738350253ba1c 288 SUPERFAMILY SSF52540 24 250 5.53E-60 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00135 6011f1413aa3a86dcc8738350253ba1c 288 SMART SM00382 49 238 2.2E-16 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS05200 2175979ba2db6dd066db312cce417f5f 391 Gene3D G3DSA:3.90.480.10 244 316 2.3E-26 T 10-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CpPa04_RS05200 2175979ba2db6dd066db312cce417f5f 391 Gene3D G3DSA:3.90.480.10 38 103 2.3E-26 T 10-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CpPa04_RS05200 2175979ba2db6dd066db312cce417f5f 391 SUPERFAMILY SSF55124 190 315 3.27E-17 T 10-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CpPa04_RS05200 2175979ba2db6dd066db312cce417f5f 391 SUPERFAMILY SSF56014 324 388 7.72E-5 T 10-03-2017 CpPa04_RS05200 2175979ba2db6dd066db312cce417f5f 391 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 41 88 2.2E-14 T 10-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CpPa04_RS05200 2175979ba2db6dd066db312cce417f5f 391 SUPERFAMILY SSF55124 17 87 1.13E-18 T 10-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CpPa04_RS04190 8b2ff75a0ce0579a822dfc78be07f231 256 SMART SM01134 72 232 6.2E-47 T 10-03-2017 CpPa04_RS04190 8b2ff75a0ce0579a822dfc78be07f231 256 Pfam PF00455 DeoR C terminal sensor domain 74 229 3.3E-37 T 10-03-2017 IPR014036 DeoR C-terminal sensor domain CpPa04_RS04190 8b2ff75a0ce0579a822dfc78be07f231 256 Gene3D G3DSA:1.10.10.10 1 56 2.1E-5 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS04190 8b2ff75a0ce0579a822dfc78be07f231 256 SMART SM00420 6 57 1.6E-7 T 10-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CpPa04_RS04190 8b2ff75a0ce0579a822dfc78be07f231 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 39 - T 10-03-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CpPa04_RS04190 8b2ff75a0ce0579a822dfc78be07f231 256 Pfam PF08220 DeoR-like helix-turn-helix domain 15 58 8.8E-9 T 10-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CpPa04_RS04190 8b2ff75a0ce0579a822dfc78be07f231 256 SUPERFAMILY SSF46785 4 61 1.34E-9 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS04190 8b2ff75a0ce0579a822dfc78be07f231 256 SUPERFAMILY SSF100950 74 231 6.91E-25 T 10-03-2017 CpPa04_RS04190 8b2ff75a0ce0579a822dfc78be07f231 256 Gene3D G3DSA:3.40.50.1360 74 213 1.0E-10 T 10-03-2017 CpPa04_RS06725 e0a291d4a87b68590a7a95e266c6ec37 289 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 27 79 3.4E-11 T 10-03-2017 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CpPa04_RS06725 e0a291d4a87b68590a7a95e266c6ec37 289 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 124 267 4.8E-49 T 10-03-2017 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CpPa04_RS06725 e0a291d4a87b68590a7a95e266c6ec37 289 SUPERFAMILY SSF75217 123 287 2.81E-85 T 10-03-2017 IPR029028 Alpha/beta knot methyltransferases CpPa04_RS06725 e0a291d4a87b68590a7a95e266c6ec37 289 SUPERFAMILY SSF75217 6 84 2.81E-85 T 10-03-2017 IPR029028 Alpha/beta knot methyltransferases CpPa04_RS06725 e0a291d4a87b68590a7a95e266c6ec37 289 Gene3D G3DSA:1.10.1270.20 207 289 3.5E-33 T 10-03-2017 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CpPa04_RS06725 e0a291d4a87b68590a7a95e266c6ec37 289 Gene3D G3DSA:3.40.1280.10 123 206 1.1E-64 T 10-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CpPa04_RS06725 e0a291d4a87b68590a7a95e266c6ec37 289 Gene3D G3DSA:3.40.1280.10 6 84 1.1E-64 T 10-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CpPa04_RS06725 e0a291d4a87b68590a7a95e266c6ec37 289 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 289 92.906 T 10-03-2017 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CpPa04_RS00230 1a7a25664e2d6a11b2b02c227e771174 460 SUPERFAMILY SSF161093 286 456 2.48E-46 T 10-03-2017 CpPa04_RS00230 1a7a25664e2d6a11b2b02c227e771174 460 Gene3D G3DSA:1.10.357.20 285 457 1.1E-54 T 10-03-2017 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CpPa04_RS00230 1a7a25664e2d6a11b2b02c227e771174 460 Gene3D G3DSA:1.25.60.10 17 135 4.1E-8 T 10-03-2017 CpPa04_RS00230 1a7a25664e2d6a11b2b02c227e771174 460 Pfam PF01769 Divalent cation transporter 329 451 4.6E-28 T 10-03-2017 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CpPa04_RS00230 1a7a25664e2d6a11b2b02c227e771174 460 Gene3D G3DSA:3.10.580.10 136 268 1.3E-9 T 10-03-2017 CpPa04_RS00230 1a7a25664e2d6a11b2b02c227e771174 460 Pfam PF03448 MgtE intracellular N domain 56 139 7.4E-7 T 10-03-2017 IPR006668 Magnesium transporter, MgtE intracellular domain CpPa04_RS00230 1a7a25664e2d6a11b2b02c227e771174 460 SUPERFAMILY SSF158791 16 138 6.02E-11 T 10-03-2017 CpPa04_RS00230 1a7a25664e2d6a11b2b02c227e771174 460 SMART SM00924 36 142 1.9E-5 T 10-03-2017 IPR006668 Magnesium transporter, MgtE intracellular domain CpPa04_RS00230 1a7a25664e2d6a11b2b02c227e771174 460 SUPERFAMILY SSF54631 142 277 7.33E-14 T 10-03-2017 CpPa04_RS00750 69eb0aa7a776a05a3b6702281da33c72 425 SUPERFAMILY SSF53383 6 411 3.11E-48 T 10-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase CpPa04_RS00750 69eb0aa7a776a05a3b6702281da33c72 425 Gene3D G3DSA:3.90.1150.10 1 165 7.9E-48 T 10-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CpPa04_RS00750 69eb0aa7a776a05a3b6702281da33c72 425 Gene3D G3DSA:3.90.1150.10 250 421 3.1E-54 T 10-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CpPa04_RS00750 69eb0aa7a776a05a3b6702281da33c72 425 Pfam PF12897 Alanine-glyoxylate amino-transferase 9 421 1.6E-171 T 10-03-2017 IPR024551 Aminotransferase, putative CpPa04_RS10045 9d646c7a661e849c0ff00b8ec91c827a 115 Pfam PF06262 Zinicin-like metallopeptidase 29 113 5.2E-28 T 10-03-2017 IPR010428 Zinicin-like metallopeptidase CpPa04_RS10045 9d646c7a661e849c0ff00b8ec91c827a 115 SUPERFAMILY SSF55486 2 114 3.9E-34 T 10-03-2017 CpPa04_RS10375 b40a853b0f0dcbebf9e5c52d557a048c 309 Gene3D G3DSA:3.40.250.10 114 233 1.3E-27 T 10-03-2017 IPR001763 Rhodanese-like domain CpPa04_RS10375 b40a853b0f0dcbebf9e5c52d557a048c 309 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 266 36.287 T 10-03-2017 IPR020936 Uncharacterised protein family UPF0176 CpPa04_RS10375 b40a853b0f0dcbebf9e5c52d557a048c 309 SMART SM00450 120 222 2.1E-11 T 10-03-2017 IPR001763 Rhodanese-like domain CpPa04_RS10375 b40a853b0f0dcbebf9e5c52d557a048c 309 SUPERFAMILY SSF52821 116 218 6.81E-21 T 10-03-2017 IPR001763 Rhodanese-like domain CpPa04_RS10375 b40a853b0f0dcbebf9e5c52d557a048c 309 Pfam PF00581 Rhodanese-like domain 121 218 1.1E-4 T 10-03-2017 IPR001763 Rhodanese-like domain CpPa04_RS10375 b40a853b0f0dcbebf9e5c52d557a048c 309 Pfam PF12368 Rhodanase C-terminal 227 299 2.7E-14 T 10-03-2017 IPR022111 Rhodanase, C-terminal CpPa04_RS08740 ea8044685e948c7b63888a1478bcf41a 262 Pfam PF11209 Protein of unknown function (DUF2993) 29 237 1.1E-19 T 10-03-2017 IPR021373 Protein of unknown function DUF2993 CpPa04_RS02695 62159ee5f6493461f6e9854c2114c67a 93 Pfam PF13490 Putative zinc-finger 13 47 1.2E-8 T 10-03-2017 IPR027383 Putative zinc-finger CpPa04_RS02695 62159ee5f6493461f6e9854c2114c67a 93 TIGRFAM TIGR02949 anti_SigH_actin: anti-sigma factor, TIGR02949 family 11 82 9.1E-19 T 10-03-2017 IPR014295 Anti-sigma factor CpPa04_RS02695 62159ee5f6493461f6e9854c2114c67a 93 TIGRFAM TIGR03988 antisig_RsrA: mycothiol system anti-sigma-R factor 12 85 9.8E-23 T 10-03-2017 IPR024020 Anti sigma-R factor, mycothiol system,RsrA CpPa04_RS07865 1f48def13452a8b1664837f1b649f376 513 SUPERFAMILY SSF53850 38 496 3.8E-107 T 10-03-2017 CpPa04_RS07865 1f48def13452a8b1664837f1b649f376 513 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 416 3.4E-75 T 10-03-2017 IPR000914 Solute-binding protein family 5 domain CpPa04_RS07865 1f48def13452a8b1664837f1b649f376 513 PIRSF PIRSF002741 6 508 2.7E-78 T 10-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CpPa04_RS07865 1f48def13452a8b1664837f1b649f376 513 Gene3D G3DSA:3.40.190.10 194 294 3.8E-27 T 10-03-2017 CpPa04_RS07865 1f48def13452a8b1664837f1b649f376 513 Gene3D G3DSA:3.90.76.10 50 193 3.8E-38 T 10-03-2017 CpPa04_RS07865 1f48def13452a8b1664837f1b649f376 513 Gene3D G3DSA:3.10.105.10 295 469 2.1E-33 T 10-03-2017 CpPa04_RS06890 bf175c8fafa5205eee7108d28eaf057b 242 TIGRFAM TIGR01919 hisA-trpF: bifunctional HisA/TrpF protein 1 242 2.2E-128 T 10-03-2017 IPR010188 Bifunctional HisA/TrpF GO:0000105|GO:0000162|GO:0003949|GO:0004640|GO:0005737 KEGG: 00340+5.3.1.16 CpPa04_RS06890 bf175c8fafa5205eee7108d28eaf057b 242 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 4 241 30.904 T 10-03-2017 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CpPa04_RS06890 bf175c8fafa5205eee7108d28eaf057b 242 Gene3D G3DSA:3.20.20.70 5 240 3.5E-69 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS06890 bf175c8fafa5205eee7108d28eaf057b 242 SUPERFAMILY SSF51366 2 240 7.4E-58 T 10-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CpPa04_RS06890 bf175c8fafa5205eee7108d28eaf057b 242 Pfam PF00977 Histidine biosynthesis protein 5 234 1.9E-62 T 10-03-2017 IPR006062 Histidine biosynthesis GO:0000105 CpPa04_RS04675 8928a96c50b13abb55b1e3d07073b4f2 70 SUPERFAMILY SSF51230 3 68 6.54E-12 T 10-03-2017 IPR011053 Single hybrid motif CpPa04_RS04675 8928a96c50b13abb55b1e3d07073b4f2 70 Gene3D G3DSA:2.40.50.100 2 68 2.2E-12 T 10-03-2017 CpPa04_RS04675 8928a96c50b13abb55b1e3d07073b4f2 70 Pfam PF00364 Biotin-requiring enzyme 9 66 7.3E-10 T 10-03-2017 IPR000089 Biotin/lipoyl attachment CpPa04_RS03115 7b8448ca84aa4818a5368820eaeb67c6 547 Pfam PF00474 Sodium:solute symporter family 46 465 2.9E-92 T 10-03-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CpPa04_RS02100 3b301d8ecb8cbd035698efe1ccf56fd9 280 SUPERFAMILY SSF53474 8 252 6.12E-29 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS02100 3b301d8ecb8cbd035698efe1ccf56fd9 280 Pfam PF12740 Chlorophyllase enzyme 32 149 1.1E-8 T 10-03-2017 IPR017395 Chlorophyllase GO:0015996|GO:0047746 KEGG: 00860+3.1.1.14|MetaCyc: PWY-5098|MetaCyc: PWY-6927|MetaCyc: PWY-7164 CpPa04_RS02100 3b301d8ecb8cbd035698efe1ccf56fd9 280 Gene3D G3DSA:3.40.50.1820 28 252 2.5E-30 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS03850 744e1c6a2b90eb5894d26c6304b287db 155 Gene3D G3DSA:3.40.50.300 1 123 2.0E-15 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03850 744e1c6a2b90eb5894d26c6304b287db 155 SUPERFAMILY SSF52540 1 144 5.41E-18 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03850 744e1c6a2b90eb5894d26c6304b287db 155 Pfam PF13671 AAA domain 3 43 2.5E-6 T 10-03-2017 CpPa04_RS03700 1a435c34b75349892452fe5f50db4bf7 308 SUPERFAMILY SSF52540 7 306 1.51E-66 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03700 1a435c34b75349892452fe5f50db4bf7 308 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 88 225 4.5E-12 T 10-03-2017 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 CpPa04_RS03700 1a435c34b75349892452fe5f50db4bf7 308 PIRSF PIRSF000545 1 308 1.8E-137 T 10-03-2017 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CpPa04_RS03700 1a435c34b75349892452fe5f50db4bf7 308 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 9 307 1.3E-121 T 10-03-2017 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CpPa04_RS03700 1a435c34b75349892452fe5f50db4bf7 308 Gene3D G3DSA:3.40.50.300 8 307 1.6E-100 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03700 1a435c34b75349892452fe5f50db4bf7 308 Hamap MF_00215 Pantothenate kinase [coaA]. 1 308 162.915 T 10-03-2017 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CpPa04_RS02150 9754e9a93786960ba8d7ba39030268e2 93 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 1 92 18.387 T 10-03-2017 IPR003482 Transcription factor WhiB CpPa04_RS02150 9754e9a93786960ba8d7ba39030268e2 93 Pfam PF02467 Transcription factor WhiB 17 86 9.7E-23 T 10-03-2017 IPR003482 Transcription factor WhiB CpPa04_RS04215 fd16effadd4573473bd08eea90631239 261 Pfam PF02754 Cysteine-rich domain 3 84 5.0E-14 T 10-03-2017 IPR004017 Cysteine-rich domain CpPa04_RS04215 fd16effadd4573473bd08eea90631239 261 Pfam PF02754 Cysteine-rich domain 136 220 4.2E-14 T 10-03-2017 IPR004017 Cysteine-rich domain CpPa04_RS04480 e735dc80c94f3525f1e78ec776862a92 243 Pfam PF01810 LysE type translocator 12 242 4.9E-52 T 10-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 CpPa04_RS06500 bf97f0e6eb732d2966696f31bac92f3a 124 Pfam PF04296 Protein of unknown function (DUF448) 23 109 3.5E-19 T 10-03-2017 IPR007393 Domain of unknown function DUF448 CpPa04_RS06500 bf97f0e6eb732d2966696f31bac92f3a 124 Gene3D G3DSA:3.30.1230.10 16 101 1.1E-21 T 10-03-2017 IPR007393 Domain of unknown function DUF448 CpPa04_RS06500 bf97f0e6eb732d2966696f31bac92f3a 124 SUPERFAMILY SSF64376 21 109 1.05E-17 T 10-03-2017 IPR007393 Domain of unknown function DUF448 CpPa04_RS07270 42e8e8a3e27844bbb058e8fe216c7e5d 273 Pfam PF02654 Cobalamin-5-phosphate synthase 23 262 2.4E-41 T 10-03-2017 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CpPa04_RS07270 42e8e8a3e27844bbb058e8fe216c7e5d 273 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 273 32.131 T 10-03-2017 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CpPa04_RS02110 ee2ada9c34cdc8f85ae314ada1f5af7a 164 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 16 144 3.4E-29 T 10-03-2017 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CpPa04_RS02110 ee2ada9c34cdc8f85ae314ada1f5af7a 164 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 19 144 2.5E-20 T 10-03-2017 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CpPa04_RS02110 ee2ada9c34cdc8f85ae314ada1f5af7a 164 SUPERFAMILY SSF52540 23 95 7.71E-13 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02110 ee2ada9c34cdc8f85ae314ada1f5af7a 164 Gene3D G3DSA:3.40.50.300 13 160 2.7E-40 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00015 28e087c8ff18a1bb64ade1d3c595447d 404 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 10-03-2017 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 CpPa04_RS00015 28e087c8ff18a1bb64ade1d3c595447d 404 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 379 3.1E-110 T 10-03-2017 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CpPa04_RS00015 28e087c8ff18a1bb64ade1d3c595447d 404 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 362 6.8E-19 T 10-03-2017 IPR003395 RecF/RecN/SMC, N-terminal CpPa04_RS00015 28e087c8ff18a1bb64ade1d3c595447d 404 ProSitePatterns PS00618 RecF protein signature 2. 330 348 - T 10-03-2017 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 CpPa04_RS00015 28e087c8ff18a1bb64ade1d3c595447d 404 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 404 86.166 T 10-03-2017 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CpPa04_RS00015 28e087c8ff18a1bb64ade1d3c595447d 404 SUPERFAMILY SSF52540 2 225 2.0E-39 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00015 28e087c8ff18a1bb64ade1d3c595447d 404 SUPERFAMILY SSF52540 263 353 2.0E-39 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00015 28e087c8ff18a1bb64ade1d3c595447d 404 Gene3D G3DSA:3.40.50.300 2 171 1.0E-45 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00015 28e087c8ff18a1bb64ade1d3c595447d 404 Gene3D G3DSA:3.40.50.300 260 361 1.0E-45 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01450 25450b8703b47c370da910c29a165a1a 268 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 31 244 7.1E-42 T 10-03-2017 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CpPa04_RS00465 9d42ddcb92f878245f795764ef0374e2 331 Pfam PF01844 HNH endonuclease 241 282 1.5E-5 T 10-03-2017 IPR002711 HNH endonuclease GO:0003676|GO:0004519 CpPa04_RS00465 9d42ddcb92f878245f795764ef0374e2 331 SMART SM00507 225 277 1.7E-9 T 10-03-2017 IPR003615 HNH nuclease CpPa04_RS00465 9d42ddcb92f878245f795764ef0374e2 331 Pfam PF02720 Domain of unknown function (DUF222) 15 233 9.5E-19 T 10-03-2017 IPR003870 Domain of unknown function DUF222 CpPa04_RS02200 899313ce40bd6135bf6fa0fa23baab60 386 SUPERFAMILY SSF55874 301 385 3.01E-6 T 10-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CpPa04_RS02200 899313ce40bd6135bf6fa0fa23baab60 386 Pfam PF04024 PspC domain 8 59 1.7E-14 T 10-03-2017 IPR007168 Phage shock protein, PspC, N-terminal CpPa04_RS03315 0235a387eae6df1986ee49b9f265834d 227 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 2.9E-10 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS03315 0235a387eae6df1986ee49b9f265834d 227 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 2.9E-10 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS03315 0235a387eae6df1986ee49b9f265834d 227 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 68 2.6E-14 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS03315 0235a387eae6df1986ee49b9f265834d 227 Gene3D G3DSA:1.10.357.10 8 168 8.7E-25 T 10-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CpPa04_RS03315 0235a387eae6df1986ee49b9f265834d 227 SUPERFAMILY SSF46689 11 77 3.54E-16 T 10-03-2017 IPR009057 Homeodomain-like GO:0003677 CpPa04_RS05255 e83d7c8e0192dbcbc2b2729661b18d6f 329 PIRSF PIRSF016838 7 326 1.7E-92 T 10-03-2017 IPR028349 Protein PafC CpPa04_RS05255 e83d7c8e0192dbcbc2b2729661b18d6f 329 Pfam PF13280 WYL domain 148 316 2.2E-24 T 10-03-2017 IPR026881 WYL domain CpPa04_RS00450 9380980cc3437a7349a06777053f854c 274 Gene3D G3DSA:3.10.180.10 134 251 1.8E-21 T 10-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CpPa04_RS00450 9380980cc3437a7349a06777053f854c 274 Gene3D G3DSA:3.10.180.10 11 120 2.5E-24 T 10-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CpPa04_RS00450 9380980cc3437a7349a06777053f854c 274 SUPERFAMILY SSF54593 140 250 3.22E-14 T 10-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CpPa04_RS00450 9380980cc3437a7349a06777053f854c 274 SUPERFAMILY SSF54593 12 120 5.64E-16 T 10-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CpPa04_RS04700 4c0a6730110d31e074b26811132f0271 255 Gene3D G3DSA:3.40.50.300 6 251 8.0E-81 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04700 4c0a6730110d31e074b26811132f0271 255 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS04700 4c0a6730110d31e074b26811132f0271 255 Pfam PF00005 ABC transporter 22 180 1.9E-31 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS04700 4c0a6730110d31e074b26811132f0271 255 SMART SM00382 31 228 5.6E-16 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS04700 4c0a6730110d31e074b26811132f0271 255 SUPERFAMILY SSF52540 6 250 1.03E-77 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04700 4c0a6730110d31e074b26811132f0271 255 PIRSF PIRSF039085 3 255 2.3E-118 T 10-03-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CpPa04_RS08140 df1756d8703fce41662ef2e4adf62ad7 206 SUPERFAMILY SSF52833 2 166 3.52E-20 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS08140 df1756d8703fce41662ef2e4adf62ad7 206 Pfam PF01323 DSBA-like thioredoxin domain 4 145 6.5E-9 T 10-03-2017 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 CpPa04_RS08140 df1756d8703fce41662ef2e4adf62ad7 206 Gene3D G3DSA:3.40.30.10 1 164 5.9E-13 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS05980 e8282bd30c7795ce6e5707d6dfac8916 298 SUPERFAMILY SSF54637 2 110 7.46E-36 T 10-03-2017 IPR029069 HotDog domain CpPa04_RS05980 e8282bd30c7795ce6e5707d6dfac8916 298 SUPERFAMILY SSF54637 114 270 6.47E-43 T 10-03-2017 IPR029069 HotDog domain CpPa04_RS05980 e8282bd30c7795ce6e5707d6dfac8916 298 Gene3D G3DSA:3.10.129.10 122 270 1.6E-49 T 10-03-2017 IPR029069 HotDog domain CpPa04_RS05980 e8282bd30c7795ce6e5707d6dfac8916 298 Gene3D G3DSA:3.10.129.10 2 109 1.4E-41 T 10-03-2017 IPR029069 HotDog domain CpPa04_RS05980 e8282bd30c7795ce6e5707d6dfac8916 298 Pfam PF13622 Thioesterase-like superfamily 30 268 2.7E-57 T 10-03-2017 CpPa04_RS10710 d7f0c05f7a65c3263de984d9a1488e39 47 Pfam PF00468 Ribosomal protein L34 5 47 2.6E-19 T 10-03-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS10710 d7f0c05f7a65c3263de984d9a1488e39 47 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 5 47 4.1E-19 T 10-03-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS10710 d7f0c05f7a65c3263de984d9a1488e39 47 ProSitePatterns PS00784 Ribosomal protein L34 signature. 5 24 - T 10-03-2017 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS10710 d7f0c05f7a65c3263de984d9a1488e39 47 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 5 25 5.0E-5 T 10-03-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS10710 d7f0c05f7a65c3263de984d9a1488e39 47 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 4 47 15.667 T 10-03-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS06545 e601c8abd8e8046c8f67f951c1b39772 182 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 98 177 1.1E-23 T 10-03-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CpPa04_RS06545 e601c8abd8e8046c8f67f951c1b39772 182 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 147 153 - T 10-03-2017 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CpPa04_RS06545 e601c8abd8e8046c8f67f951c1b39772 182 Gene3D G3DSA:1.10.10.10 98 177 3.6E-25 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS06545 e601c8abd8e8046c8f67f951c1b39772 182 SUPERFAMILY SSF46767 98 177 6.15E-23 T 10-03-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CpPa04_RS06545 e601c8abd8e8046c8f67f951c1b39772 182 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 98 176 2.3E-27 T 10-03-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CpPa04_RS09150 fb4d69639a38a0e452fbf266224ddb69 158 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 52 58 - T 10-03-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 CpPa04_RS09150 fb4d69639a38a0e452fbf266224ddb69 158 Gene3D G3DSA:3.90.80.10 3 157 1.3E-53 T 10-03-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 CpPa04_RS09150 fb4d69639a38a0e452fbf266224ddb69 158 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 1 157 33.382 T 10-03-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 CpPa04_RS09150 fb4d69639a38a0e452fbf266224ddb69 158 Pfam PF00719 Inorganic pyrophosphatase 5 157 1.6E-52 T 10-03-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 CpPa04_RS09150 fb4d69639a38a0e452fbf266224ddb69 158 SUPERFAMILY SSF50324 4 158 2.35E-57 T 10-03-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 CpPa04_RS10530 50254ea9367705b9d1a33943fe7c3d18 497 Hamap MF_01567 UPF0371 protein . 3 497 57.354 T 10-03-2017 IPR014999 Uncharacterised protein family UPF0371 CpPa04_RS10530 50254ea9367705b9d1a33943fe7c3d18 497 Gene3D G3DSA:3.10.630.10 255 284 8.2E-119 T 10-03-2017 CpPa04_RS10530 50254ea9367705b9d1a33943fe7c3d18 497 Gene3D G3DSA:3.10.630.10 3 209 8.2E-119 T 10-03-2017 CpPa04_RS10530 50254ea9367705b9d1a33943fe7c3d18 497 Pfam PF08903 Domain of unknown function (DUF1846) 5 494 1.4E-238 T 10-03-2017 IPR014999 Uncharacterised protein family UPF0371 CpPa04_RS10530 50254ea9367705b9d1a33943fe7c3d18 497 PIRSF PIRSF033132 3 497 1.1E-270 T 10-03-2017 IPR014999 Uncharacterised protein family UPF0371 CpPa04_RS10530 50254ea9367705b9d1a33943fe7c3d18 497 Gene3D G3DSA:1.20.1570.10 285 342 4.8E-45 T 10-03-2017 CpPa04_RS10530 50254ea9367705b9d1a33943fe7c3d18 497 Gene3D G3DSA:1.20.1570.10 210 248 4.8E-45 T 10-03-2017 CpPa04_RS02375 06a2107a24c9148c3164388decdda3a1 404 Gene3D G3DSA:3.40.710.10 88 329 8.6E-63 T 10-03-2017 IPR012338 Beta-lactamase/transpeptidase-like CpPa04_RS02375 06a2107a24c9148c3164388decdda3a1 404 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 88 310 1.0E-34 T 10-03-2017 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CpPa04_RS02375 06a2107a24c9148c3164388decdda3a1 404 SUPERFAMILY SSF56601 12 32 5.64E-51 T 10-03-2017 IPR012338 Beta-lactamase/transpeptidase-like CpPa04_RS02375 06a2107a24c9148c3164388decdda3a1 404 SUPERFAMILY SSF56601 91 327 5.64E-51 T 10-03-2017 IPR012338 Beta-lactamase/transpeptidase-like CpPa04_RS02375 06a2107a24c9148c3164388decdda3a1 404 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 193 206 8.4E-9 T 10-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CpPa04_RS02375 06a2107a24c9148c3164388decdda3a1 404 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 167 184 8.4E-9 T 10-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CpPa04_RS02375 06a2107a24c9148c3164388decdda3a1 404 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 119 130 8.4E-9 T 10-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CpPa04_RS02530 7a968a65968bd62e00bf1d6ef50849dd 361 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 124 323 2.0E-22 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS02530 7a968a65968bd62e00bf1d6ef50849dd 361 Gene3D G3DSA:1.10.3720.10 19 316 4.9E-66 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS02530 7a968a65968bd62e00bf1d6ef50849dd 361 SUPERFAMILY SSF161098 23 324 2.88E-58 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS06100 3dcf90ac9e6f5b41b9aa6bf46456a0ab 401 SUPERFAMILY SSF47819 206 309 2.62E-17 T 10-03-2017 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CpPa04_RS06100 3dcf90ac9e6f5b41b9aa6bf46456a0ab 401 SUPERFAMILY SSF53098 8 218 3.49E-49 T 10-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CpPa04_RS06100 3dcf90ac9e6f5b41b9aa6bf46456a0ab 401 Pfam PF01612 3'-5' exonuclease 21 180 4.1E-28 T 10-03-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CpPa04_RS06100 3dcf90ac9e6f5b41b9aa6bf46456a0ab 401 SMART SM00474 13 181 1.6E-30 T 10-03-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CpPa04_RS06100 3dcf90ac9e6f5b41b9aa6bf46456a0ab 401 Gene3D G3DSA:3.30.420.10 17 194 1.9E-8 T 10-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CpPa04_RS06100 3dcf90ac9e6f5b41b9aa6bf46456a0ab 401 Pfam PF00570 HRDC domain 227 289 1.7E-7 T 10-03-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 CpPa04_RS07200 6c652acd0d0ff06cd090923129daaafd 376 Gene3D G3DSA:3.40.50.2000 161 357 4.1E-36 T 10-03-2017 CpPa04_RS07200 6c652acd0d0ff06cd090923129daaafd 376 Pfam PF00534 Glycosyl transferases group 1 182 357 9.4E-44 T 10-03-2017 IPR001296 Glycosyl transferase, family 1 CpPa04_RS07200 6c652acd0d0ff06cd090923129daaafd 376 Pfam PF13439 Glycosyltransferase Family 4 16 173 2.5E-15 T 10-03-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CpPa04_RS07200 6c652acd0d0ff06cd090923129daaafd 376 SUPERFAMILY SSF53756 1 375 7.68E-82 T 10-03-2017 CpPa04_RS03050 223b86c3e641bef78a14c268b7a9bb4e 244 Pfam PF11228 Protein of unknown function (DUF3027) 37 216 5.8E-68 T 10-03-2017 IPR021391 Protein of unknown function DUF3027 CpPa04_RS06010 2b284c55b21c8799fd2bb0b54eb5d98b 305 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 6 291 1.1E-60 T 10-03-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CpPa04_RS04020 511147c943895cf40c7dfe5210cd3132 213 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 40 193 4.5E-28 T 10-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS04020 511147c943895cf40c7dfe5210cd3132 213 SUPERFAMILY SSF88659 140 195 1.46E-15 T 10-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS04020 511147c943895cf40c7dfe5210cd3132 213 Gene3D G3DSA:1.10.1740.10 35 108 7.7E-25 T 10-03-2017 CpPa04_RS04020 511147c943895cf40c7dfe5210cd3132 213 SUPERFAMILY SSF88946 37 117 1.51E-22 T 10-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS04020 511147c943895cf40c7dfe5210cd3132 213 Gene3D G3DSA:1.10.10.10 140 196 2.1E-21 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS04020 511147c943895cf40c7dfe5210cd3132 213 Pfam PF04542 Sigma-70 region 2 42 108 1.5E-19 T 10-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS04020 511147c943895cf40c7dfe5210cd3132 213 Pfam PF08281 Sigma-70, region 4 140 191 1.3E-13 T 10-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CpPa04_RS02895 a9b265602165870b303a891d7ca9f59e 120 Pfam PF00364 Biotin-requiring enzyme 56 119 5.3E-20 T 10-03-2017 IPR000089 Biotin/lipoyl attachment CpPa04_RS02895 a9b265602165870b303a891d7ca9f59e 120 SUPERFAMILY SSF51230 50 120 1.03E-22 T 10-03-2017 IPR011053 Single hybrid motif CpPa04_RS02895 a9b265602165870b303a891d7ca9f59e 120 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 76 93 - T 10-03-2017 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CpPa04_RS02895 a9b265602165870b303a891d7ca9f59e 120 Gene3D G3DSA:2.40.50.100 51 119 4.3E-25 T 10-03-2017 CpPa04_RS07190 cf3b77621dbd3720899d080b09207050 242 SUPERFAMILY SSF69593 5 226 1.96E-49 T 10-03-2017 CpPa04_RS07190 cf3b77621dbd3720899d080b09207050 242 Pfam PF01553 Acyltransferase 25 154 3.6E-24 T 10-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CpPa04_RS07190 cf3b77621dbd3720899d080b09207050 242 Gene3D G3DSA:3.40.1130.10 4 214 1.1E-31 T 10-03-2017 CpPa04_RS07190 cf3b77621dbd3720899d080b09207050 242 SMART SM00563 38 157 1.7E-32 T 10-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CpPa04_RS05180 93076c840d2ab4a28c5a7575a8c02900 265 Gene3D G3DSA:3.90.550.10 10 217 1.4E-22 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS05180 93076c840d2ab4a28c5a7575a8c02900 265 SUPERFAMILY SSF53448 7 221 5.53E-40 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS05180 93076c840d2ab4a28c5a7575a8c02900 265 Pfam PF00535 Glycosyl transferase family 2 10 174 2.8E-30 T 10-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CpPa04_RS04005 34ad5c61af21a810a4af4dee5b6f7125 390 TIGRFAM TIGR02149 glgA_Coryne: glycogen synthase, Corynebacterium family 1 389 1.7E-172 T 10-03-2017 IPR011875 Glycogen synthase, corynebacterial KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CpPa04_RS04005 34ad5c61af21a810a4af4dee5b6f7125 390 Pfam PF00534 Glycosyl transferases group 1 199 367 4.1E-32 T 10-03-2017 IPR001296 Glycosyl transferase, family 1 CpPa04_RS04005 34ad5c61af21a810a4af4dee5b6f7125 390 Gene3D G3DSA:3.40.50.2000 163 367 2.3E-49 T 10-03-2017 CpPa04_RS04005 34ad5c61af21a810a4af4dee5b6f7125 390 Pfam PF13439 Glycosyltransferase Family 4 15 178 3.2E-29 T 10-03-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CpPa04_RS04005 34ad5c61af21a810a4af4dee5b6f7125 390 SUPERFAMILY SSF53756 1 389 1.57E-87 T 10-03-2017 CpPa04_RS01115 157632e3b6e9459db39681a4b8ba5d96 374 TIGRFAM TIGR03819 heli_sec_ATPase: helicase/secretion neighborhood ATPase 8 349 2.5E-141 T 10-03-2017 IPR022399 Helicase/secretion neighbourhood ATPase CpPa04_RS01115 157632e3b6e9459db39681a4b8ba5d96 374 Pfam PF00437 Type II/IV secretion system protein 61 338 3.8E-66 T 10-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CpPa04_RS01115 157632e3b6e9459db39681a4b8ba5d96 374 Gene3D G3DSA:3.30.450.90 57 155 1.5E-15 T 10-03-2017 CpPa04_RS01115 157632e3b6e9459db39681a4b8ba5d96 374 SUPERFAMILY SSF52540 39 343 8.75E-49 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01115 157632e3b6e9459db39681a4b8ba5d96 374 Gene3D G3DSA:3.40.50.300 162 347 2.1E-48 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05325 379a4e07cf18e1fb345558413fa2ee65 87 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 1 87 17.236 T 10-03-2017 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CpPa04_RS05325 379a4e07cf18e1fb345558413fa2ee65 87 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 5 86 5.9E-23 T 10-03-2017 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CpPa04_RS05325 379a4e07cf18e1fb345558413fa2ee65 87 SUPERFAMILY SSF101386 3 87 3.18E-22 T 10-03-2017 CpPa04_RS05325 379a4e07cf18e1fb345558413fa2ee65 87 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 11 85 1.8E-6 T 10-03-2017 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 CpPa04_RS09035 3c75629838497f553d13a9d1a986213f 467 Gene3D G3DSA:1.20.1250.20 268 464 1.6E-14 T 10-03-2017 CpPa04_RS09035 3c75629838497f553d13a9d1a986213f 467 Gene3D G3DSA:1.20.1250.20 21 196 1.8E-26 T 10-03-2017 CpPa04_RS09035 3c75629838497f553d13a9d1a986213f 467 SUPERFAMILY SSF103473 19 206 4.05E-49 T 10-03-2017 IPR020846 Major facilitator superfamily domain CpPa04_RS09035 3c75629838497f553d13a9d1a986213f 467 SUPERFAMILY SSF103473 253 464 4.05E-49 T 10-03-2017 IPR020846 Major facilitator superfamily domain CpPa04_RS09035 3c75629838497f553d13a9d1a986213f 467 Pfam PF07690 Major Facilitator Superfamily 22 289 2.4E-29 T 10-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CpPa04_RS06375 cf1b7bbe84adb52254281e655d4feddf 230 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS06375 cf1b7bbe84adb52254281e655d4feddf 230 SUPERFAMILY SSF52540 4 220 9.76E-54 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06375 cf1b7bbe84adb52254281e655d4feddf 230 Pfam PF00005 ABC transporter 20 162 1.9E-26 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS06375 cf1b7bbe84adb52254281e655d4feddf 230 Gene3D G3DSA:3.40.50.300 4 221 1.4E-58 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06375 cf1b7bbe84adb52254281e655d4feddf 230 SMART SM00382 27 207 2.5E-10 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS07600 1f7b9910ee50fd8a76843c2acdaeb792 911 Gene3D G3DSA:3.40.50.970 77 492 9.6E-155 T 10-03-2017 IPR029061 Thiamin diphosphate-binding fold CpPa04_RS07600 1f7b9910ee50fd8a76843c2acdaeb792 911 SUPERFAMILY SSF52518 498 727 1.65E-87 T 10-03-2017 IPR029061 Thiamin diphosphate-binding fold CpPa04_RS07600 1f7b9910ee50fd8a76843c2acdaeb792 911 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 25 906 0.0 T 10-03-2017 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CpPa04_RS07600 1f7b9910ee50fd8a76843c2acdaeb792 911 Gene3D G3DSA:3.40.50.920 735 908 2.0E-60 T 10-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CpPa04_RS07600 1f7b9910ee50fd8a76843c2acdaeb792 911 SUPERFAMILY SSF52518 77 493 6.79E-133 T 10-03-2017 IPR029061 Thiamin diphosphate-binding fold CpPa04_RS07600 1f7b9910ee50fd8a76843c2acdaeb792 911 SUPERFAMILY SSF52922 729 907 2.27E-46 T 10-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CpPa04_RS07600 1f7b9910ee50fd8a76843c2acdaeb792 911 PIRSF PIRSF000156 17 911 0.0 T 10-03-2017 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CpPa04_RS07600 1f7b9910ee50fd8a76843c2acdaeb792 911 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 383 448 9.3E-5 T 10-03-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CpPa04_RS07600 1f7b9910ee50fd8a76843c2acdaeb792 911 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 156 326 1.0E-9 T 10-03-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CpPa04_RS07600 1f7b9910ee50fd8a76843c2acdaeb792 911 Gene3D G3DSA:3.40.50.970 497 731 7.1E-111 T 10-03-2017 IPR029061 Thiamin diphosphate-binding fold CpPa04_RS09315 9c567530ba15a707b0b41dbeb6541d5c 475 Pfam PF12729 Four helix bundle sensory module for signal transduction 266 434 1.2E-9 T 10-03-2017 IPR024478 4HB MCP domain CpPa04_RS00705 1da7c40dab262df0356ae6aca67375b7 795 Pfam PF03176 MMPL family 48 401 9.2E-58 T 10-03-2017 IPR004869 Membrane transport protein, MMPL domain GO:0016020 CpPa04_RS00705 1da7c40dab262df0356ae6aca67375b7 795 Pfam PF03176 MMPL family 471 765 1.3E-33 T 10-03-2017 IPR004869 Membrane transport protein, MMPL domain GO:0016020 CpPa04_RS00705 1da7c40dab262df0356ae6aca67375b7 795 SUPERFAMILY SSF82866 536 761 1.83E-26 T 10-03-2017 CpPa04_RS00705 1da7c40dab262df0356ae6aca67375b7 795 PRINTS PR00702 Acriflavin resistance protein family signature 212 235 6.2E-5 T 10-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CpPa04_RS00705 1da7c40dab262df0356ae6aca67375b7 795 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 6.2E-5 T 10-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CpPa04_RS00705 1da7c40dab262df0356ae6aca67375b7 795 PRINTS PR00702 Acriflavin resistance protein family signature 265 289 6.2E-5 T 10-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CpPa04_RS00705 1da7c40dab262df0356ae6aca67375b7 795 SUPERFAMILY SSF82866 151 371 4.19E-27 T 10-03-2017 CpPa04_RS00705 1da7c40dab262df0356ae6aca67375b7 795 Gene3D G3DSA:1.20.1640.10 212 373 4.7E-27 T 10-03-2017 CpPa04_RS00705 1da7c40dab262df0356ae6aca67375b7 795 Gene3D G3DSA:1.20.1640.10 540 767 3.3E-28 T 10-03-2017 CpPa04_RS01005 68ca0a19f69cecd4907a9a200b3a6d47 304 Pfam PF00005 ABC transporter 17 157 1.5E-24 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS01005 68ca0a19f69cecd4907a9a200b3a6d47 304 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS01005 68ca0a19f69cecd4907a9a200b3a6d47 304 SUPERFAMILY SSF52540 2 217 7.21E-57 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01005 68ca0a19f69cecd4907a9a200b3a6d47 304 SMART SM00382 26 207 4.2E-8 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS01005 68ca0a19f69cecd4907a9a200b3a6d47 304 Gene3D G3DSA:3.40.50.300 2 219 2.6E-65 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06295 3cec8695e7455338073caf2f46a17749 220 Gene3D G3DSA:3.40.50.360 3 177 6.7E-32 T 10-03-2017 IPR029039 Flavoprotein-like domain CpPa04_RS06295 3cec8695e7455338073caf2f46a17749 220 Pfam PF03358 NADPH-dependent FMN reductase 4 152 1.8E-31 T 10-03-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CpPa04_RS06295 3cec8695e7455338073caf2f46a17749 220 TIGRFAM TIGR04037 LLM_duo_CE1759: LLM-partnered FMN reductase, CE1759 family 4 215 2.9E-80 T 10-03-2017 IPR023932 Uncharacterised protein family, CE1759 CpPa04_RS06295 3cec8695e7455338073caf2f46a17749 220 SUPERFAMILY SSF52218 4 183 1.87E-26 T 10-03-2017 IPR029039 Flavoprotein-like domain CpPa04_RS07850 9d16463b5048d2f8bdd5c08418a737da 610 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 25 514 4.5E-169 T 10-03-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CpPa04_RS07850 9d16463b5048d2f8bdd5c08418a737da 610 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 63 515 1.3E-165 T 10-03-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CpPa04_RS07960 f56c9bfa3a677a993ff72311b311c067 133 Gene3D G3DSA:1.25.40.20 15 106 3.6E-21 T 10-03-2017 IPR020683 Ankyrin repeat-containing domain CpPa04_RS07960 f56c9bfa3a677a993ff72311b311c067 133 SUPERFAMILY SSF48403 15 132 1.4E-22 T 10-03-2017 IPR020683 Ankyrin repeat-containing domain CpPa04_RS07960 f56c9bfa3a677a993ff72311b311c067 133 Pfam PF12796 Ankyrin repeats (3 copies) 18 103 2.9E-8 T 10-03-2017 IPR020683 Ankyrin repeat-containing domain CpPa04_RS07960 f56c9bfa3a677a993ff72311b311c067 133 SMART SM00248 78 107 7.0 T 10-03-2017 IPR002110 Ankyrin repeat GO:0005515 CpPa04_RS07960 f56c9bfa3a677a993ff72311b311c067 133 SMART SM00248 45 74 2.6E-5 T 10-03-2017 IPR002110 Ankyrin repeat GO:0005515 CpPa04_RS07920 b0e304677047b7d7ddc81d7160e52f8f 410 Gene3D G3DSA:1.20.1250.20 13 190 5.3E-16 T 10-03-2017 CpPa04_RS07920 b0e304677047b7d7ddc81d7160e52f8f 410 Gene3D G3DSA:1.20.1250.20 217 409 1.0E-11 T 10-03-2017 CpPa04_RS07920 b0e304677047b7d7ddc81d7160e52f8f 410 Pfam PF07690 Major Facilitator Superfamily 14 366 1.8E-18 T 10-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CpPa04_RS07920 b0e304677047b7d7ddc81d7160e52f8f 410 SUPERFAMILY SSF103473 11 409 3.14E-34 T 10-03-2017 IPR020846 Major facilitator superfamily domain CpPa04_RS02125 c9185861d02389f00581127a53d9f1cf 224 Gene3D G3DSA:3.30.420.40 2 131 1.4E-34 T 10-03-2017 CpPa04_RS02125 c9185861d02389f00581127a53d9f1cf 224 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 203 1.9E-48 T 10-03-2017 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 CpPa04_RS02125 c9185861d02389f00581127a53d9f1cf 224 Pfam PF00814 Glycoprotease family 38 136 2.7E-25 T 10-03-2017 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CpPa04_RS02125 c9185861d02389f00581127a53d9f1cf 224 SUPERFAMILY SSF53067 3 107 2.76E-22 T 10-03-2017 CpPa04_RS02125 c9185861d02389f00581127a53d9f1cf 224 SUPERFAMILY SSF53067 111 201 2.98E-6 T 10-03-2017 CpPa04_RS05030 41fb254ae9d974d9b461b0d9cd7da675 434 Pfam PF07690 Major Facilitator Superfamily 23 380 4.9E-18 T 10-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CpPa04_RS05030 41fb254ae9d974d9b461b0d9cd7da675 434 SUPERFAMILY SSF103473 19 429 1.44E-20 T 10-03-2017 IPR020846 Major facilitator superfamily domain CpPa04_RS08775 36a6b9c1d459507a7cd131983f9331aa 520 Pfam PF00156 Phosphoribosyl transferase domain 314 417 4.6E-7 T 10-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 CpPa04_RS08775 36a6b9c1d459507a7cd131983f9331aa 520 Pfam PF13537 Glutamine amidotransferase domain 125 245 3.3E-17 T 10-03-2017 IPR017932 Glutamine amidotransferase type 2 domain CpPa04_RS08775 36a6b9c1d459507a7cd131983f9331aa 520 Gene3D G3DSA:3.60.20.10 43 288 3.7E-67 T 10-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal CpPa04_RS08775 36a6b9c1d459507a7cd131983f9331aa 520 SUPERFAMILY SSF53271 282 501 4.2E-64 T 10-03-2017 IPR029057 Phosphoribosyltransferase-like CpPa04_RS08775 36a6b9c1d459507a7cd131983f9331aa 520 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 43 495 1.3E-153 T 10-03-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CpPa04_RS08775 36a6b9c1d459507a7cd131983f9331aa 520 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 42 496 45.549 T 10-03-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CpPa04_RS08775 36a6b9c1d459507a7cd131983f9331aa 520 PIRSF PIRSF000485 39 511 1.1E-159 T 10-03-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CpPa04_RS08775 36a6b9c1d459507a7cd131983f9331aa 520 Gene3D G3DSA:3.40.50.2020 304 476 2.9E-43 T 10-03-2017 IPR029057 Phosphoribosyltransferase-like CpPa04_RS08775 36a6b9c1d459507a7cd131983f9331aa 520 SUPERFAMILY SSF56235 43 300 1.12E-67 T 10-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal CpPa04_RS04260 f82b5d2b12bb743a68dd2398bde80cfc 356 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 10-03-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CpPa04_RS04260 f82b5d2b12bb743a68dd2398bde80cfc 356 Pfam PF00472 RF-1 domain 214 321 1.7E-40 T 10-03-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CpPa04_RS04260 f82b5d2b12bb743a68dd2398bde80cfc 356 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 3 356 34.907 T 10-03-2017 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CpPa04_RS04260 f82b5d2b12bb743a68dd2398bde80cfc 356 Gene3D G3DSA:1.20.58.410 3 94 3.6E-15 T 10-03-2017 CpPa04_RS04260 f82b5d2b12bb743a68dd2398bde80cfc 356 Pfam PF03462 PCRF domain 11 203 2.7E-60 T 10-03-2017 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CpPa04_RS04260 f82b5d2b12bb743a68dd2398bde80cfc 356 SUPERFAMILY SSF75620 10 353 2.09E-121 T 10-03-2017 CpPa04_RS04260 f82b5d2b12bb743a68dd2398bde80cfc 356 Gene3D G3DSA:3.30.160.20 213 289 4.6E-35 T 10-03-2017 IPR014720 Double-stranded RNA-binding domain CpPa04_RS04260 f82b5d2b12bb743a68dd2398bde80cfc 356 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 4 354 6.9E-137 T 10-03-2017 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CpPa04_RS04260 f82b5d2b12bb743a68dd2398bde80cfc 356 SMART SM00937 65 178 8.3E-43 T 10-03-2017 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CpPa04_RS05795 cf7796d032baada1707989e63c7b79f6 146 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 3 141 4.0E-75 T 10-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CpPa04_RS05795 cf7796d032baada1707989e63c7b79f6 146 ProSitePatterns PS01029 Dehydroquinase class II signature. 6 23 - T 10-03-2017 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CpPa04_RS05795 cf7796d032baada1707989e63c7b79f6 146 SUPERFAMILY SSF52304 1 141 5.1E-56 T 10-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CpPa04_RS05795 cf7796d032baada1707989e63c7b79f6 146 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 146 66.318 T 10-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CpPa04_RS05795 cf7796d032baada1707989e63c7b79f6 146 Pfam PF01220 Dehydroquinase class II 2 140 3.0E-55 T 10-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CpPa04_RS05795 cf7796d032baada1707989e63c7b79f6 146 Gene3D G3DSA:3.40.50.9100 1 141 5.7E-59 T 10-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CpPa04_RS05795 cf7796d032baada1707989e63c7b79f6 146 PIRSF PIRSF001399 1 146 3.0E-57 T 10-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CpPa04_RS05795 cf7796d032baada1707989e63c7b79f6 146 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 141 3.8E-56 T 10-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CpPa04_RS02830 4e452293bb638df8c804c3d1099d061c 98 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 30 97 1.8E-19 T 10-03-2017 IPR018720 Domain of unknown function DUF2249 CpPa04_RS03610 ac523f2eae6286409940eb77d3f6c094 496 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 11 496 1.4E-172 T 10-03-2017 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 CpPa04_RS03610 ac523f2eae6286409940eb77d3f6c094 496 Pfam PF13520 Amino acid permease 18 435 2.1E-58 T 10-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CpPa04_RS09705 09fa7fff2e3984d7010fa7d7292d64f6 170 SUPERFAMILY SSF51971 5 94 3.3E-6 T 10-03-2017 CpPa04_RS09705 09fa7fff2e3984d7010fa7d7292d64f6 170 Gene3D G3DSA:3.40.50.720 5 95 5.6E-13 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS02615 0005d19a1aa845ec9e6355e7bf704aee 225 Pfam PF00072 Response regulator receiver domain 5 113 1.7E-31 T 10-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CpPa04_RS02615 0005d19a1aa845ec9e6355e7bf704aee 225 Gene3D G3DSA:3.40.50.2300 3 120 9.2E-41 T 10-03-2017 CpPa04_RS02615 0005d19a1aa845ec9e6355e7bf704aee 225 SUPERFAMILY SSF52172 3 167 1.57E-42 T 10-03-2017 IPR011006 CheY-like superfamily CpPa04_RS02615 0005d19a1aa845ec9e6355e7bf704aee 225 SMART SM00862 145 222 5.4E-26 T 10-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CpPa04_RS02615 0005d19a1aa845ec9e6355e7bf704aee 225 Gene3D G3DSA:1.10.10.10 125 222 6.9E-34 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS02615 0005d19a1aa845ec9e6355e7bf704aee 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 221 3.9E-26 T 10-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CpPa04_RS02615 0005d19a1aa845ec9e6355e7bf704aee 225 SMART SM00448 3 113 3.6E-46 T 10-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CpPa04_RS08305 ed188966f9320d3fab1c5c20cfbc5f5c 114 Pfam PF03992 Antibiotic biosynthesis monooxygenase 3 70 3.5E-15 T 10-03-2017 IPR007138 Antibiotic biosynthesis monooxygenase domain CpPa04_RS08305 ed188966f9320d3fab1c5c20cfbc5f5c 114 SUPERFAMILY SSF54909 1 85 3.18E-21 T 10-03-2017 IPR011008 Dimeric alpha-beta barrel CpPa04_RS08305 ed188966f9320d3fab1c5c20cfbc5f5c 114 Gene3D G3DSA:3.30.70.900 1 111 4.7E-29 T 10-03-2017 CpPa04_RS09255 952f80bf43d663d3efde343549fdadbb 120 Pfam PF03334 Na+/H+ antiporter subunit 14 96 1.2E-19 T 10-03-2017 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 CpPa04_RS09310 f49861d28cac9d0d0dc76de742346d61 159 PRINTS PR00502 NUDIX hydrolase family signature 66 81 3.0E-6 T 10-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CpPa04_RS09310 f49861d28cac9d0d0dc76de742346d61 159 PRINTS PR00502 NUDIX hydrolase family signature 52 66 3.0E-6 T 10-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CpPa04_RS09310 f49861d28cac9d0d0dc76de742346d61 159 SUPERFAMILY SSF55811 9 148 6.77E-27 T 10-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CpPa04_RS09310 f49861d28cac9d0d0dc76de742346d61 159 ProSitePatterns PS00893 Nudix box signature. 57 78 - T 10-03-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CpPa04_RS09310 f49861d28cac9d0d0dc76de742346d61 159 Pfam PF00293 NUDIX domain 24 137 5.7E-18 T 10-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 CpPa04_RS09310 f49861d28cac9d0d0dc76de742346d61 159 Gene3D G3DSA:3.90.79.10 4 152 3.2E-34 T 10-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CpPa04_RS00355 a86011443a1921ff63904f7c5023f407 185 SUPERFAMILY SSF51161 9 171 6.38E-42 T 10-03-2017 IPR011004 Trimeric LpxA-like CpPa04_RS00355 a86011443a1921ff63904f7c5023f407 185 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 93 125 8.6E-5 T 10-03-2017 IPR001451 Hexapeptide repeat CpPa04_RS00355 a86011443a1921ff63904f7c5023f407 185 Gene3D G3DSA:2.160.10.10 10 172 2.8E-40 T 10-03-2017 CpPa04_RS03885 550ff5506478c5ca12f6949d464ed78a 114 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 2 114 2.1E-37 T 10-03-2017 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 CpPa04_RS03885 550ff5506478c5ca12f6949d464ed78a 114 Pfam PF03960 ArsC family 9 113 5.7E-14 T 10-03-2017 IPR006660 Arsenate reductase-like CpPa04_RS03885 550ff5506478c5ca12f6949d464ed78a 114 SUPERFAMILY SSF52833 1 114 5.12E-29 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS03885 550ff5506478c5ca12f6949d464ed78a 114 Gene3D G3DSA:3.40.30.10 1 114 5.5E-42 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS02355 8d507ee5235c3d1774f15882a236db28 299 SUPERFAMILY SSF56219 227 298 2.49E-58 T 10-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase CpPa04_RS02355 8d507ee5235c3d1774f15882a236db28 299 SUPERFAMILY SSF56219 1 194 2.49E-58 T 10-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase CpPa04_RS02355 8d507ee5235c3d1774f15882a236db28 299 Gene3D G3DSA:3.60.10.10 1 194 6.9E-77 T 10-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase CpPa04_RS02355 8d507ee5235c3d1774f15882a236db28 299 Gene3D G3DSA:3.60.10.10 227 298 6.9E-77 T 10-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase CpPa04_RS02355 8d507ee5235c3d1774f15882a236db28 299 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 291 2.5E-15 T 10-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase CpPa04_RS02355 8d507ee5235c3d1774f15882a236db28 299 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 195 3.9E-32 T 10-03-2017 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CpPa04_RS07150 4eb1c39731cc7d9a4114a474359c8db5 327 SUPERFAMILY SSF51730 19 314 2.16E-80 T 10-03-2017 IPR029041 FAD-linked oxidoreductase-like CpPa04_RS07150 4eb1c39731cc7d9a4114a474359c8db5 327 Gene3D G3DSA:3.20.20.220 22 315 2.9E-88 T 10-03-2017 IPR029041 FAD-linked oxidoreductase-like CpPa04_RS07150 4eb1c39731cc7d9a4114a474359c8db5 327 Pfam PF02219 Methylenetetrahydrofolate reductase 23 312 1.7E-76 T 10-03-2017 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CpPa04_RS09460 c43a303b1cbd1a47cfb50be29151f839 104 SUPERFAMILY SSF46785 11 101 3.22E-23 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS09460 c43a303b1cbd1a47cfb50be29151f839 104 Pfam PF03551 Transcriptional regulator PadR-like family 15 82 1.4E-17 T 10-03-2017 IPR005149 Transcription regulator PadR, N-terminal CpPa04_RS09460 c43a303b1cbd1a47cfb50be29151f839 104 Gene3D G3DSA:1.10.10.10 3 102 1.8E-27 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS05805 932b7c9af08a93bb14a82abfbcf0fc3c 198 Gene3D G3DSA:3.40.50.300 29 194 4.5E-46 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05805 932b7c9af08a93bb14a82abfbcf0fc3c 198 Pfam PF01202 Shikimate kinase 38 190 6.4E-43 T 10-03-2017 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CpPa04_RS05805 932b7c9af08a93bb14a82abfbcf0fc3c 198 SUPERFAMILY SSF52540 30 193 1.45E-28 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05805 932b7c9af08a93bb14a82abfbcf0fc3c 198 Hamap MF_00109 Shikimate kinase [aroK]. 29 193 24.96 T 10-03-2017 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CpPa04_RS05805 932b7c9af08a93bb14a82abfbcf0fc3c 198 PRINTS PR01100 Shikimate kinase family signature 84 92 1.8E-19 T 10-03-2017 CpPa04_RS05805 932b7c9af08a93bb14a82abfbcf0fc3c 198 PRINTS PR01100 Shikimate kinase family signature 32 47 1.8E-19 T 10-03-2017 CpPa04_RS05805 932b7c9af08a93bb14a82abfbcf0fc3c 198 PRINTS PR01100 Shikimate kinase family signature 121 138 1.8E-19 T 10-03-2017 CpPa04_RS05805 932b7c9af08a93bb14a82abfbcf0fc3c 198 PRINTS PR01100 Shikimate kinase family signature 101 110 1.8E-19 T 10-03-2017 CpPa04_RS05805 932b7c9af08a93bb14a82abfbcf0fc3c 198 PRINTS PR01100 Shikimate kinase family signature 56 69 1.8E-19 T 10-03-2017 CpPa04_RS05805 932b7c9af08a93bb14a82abfbcf0fc3c 198 ProSitePatterns PS01128 Shikimate kinase signature. 85 109 - T 10-03-2017 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CpPa04_RS00415 a3223d3cfd9f51996a0a6a478e39d561 513 Pfam PF03611 PTS system sugar-specific permease component 15 427 9.6E-129 T 10-03-2017 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 CpPa04_RS00795 d09e95a6de9afec13b926f79d88f9595 276 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 69 271 1.1E-61 T 10-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CpPa04_RS00795 d09e95a6de9afec13b926f79d88f9595 276 Gene3D G3DSA:3.90.850.10 61 274 3.4E-72 T 10-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CpPa04_RS00795 d09e95a6de9afec13b926f79d88f9595 276 SUPERFAMILY SSF56529 58 272 1.57E-70 T 10-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CpPa04_RS06780 07be91b7687f60ab14fc917f6cdf778f 488 Pfam PF01235 Sodium:alanine symporter family 60 457 7.2E-148 T 10-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CpPa04_RS06780 07be91b7687f60ab14fc917f6cdf778f 488 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 95 110 - T 10-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CpPa04_RS06780 07be91b7687f60ab14fc917f6cdf778f 488 PRINTS PR00175 Sodium/alanine symporter signature 190 208 1.4E-51 T 10-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CpPa04_RS06780 07be91b7687f60ab14fc917f6cdf778f 488 PRINTS PR00175 Sodium/alanine symporter signature 309 327 1.4E-51 T 10-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CpPa04_RS06780 07be91b7687f60ab14fc917f6cdf778f 488 PRINTS PR00175 Sodium/alanine symporter signature 414 434 1.4E-51 T 10-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CpPa04_RS06780 07be91b7687f60ab14fc917f6cdf778f 488 PRINTS PR00175 Sodium/alanine symporter signature 354 376 1.4E-51 T 10-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CpPa04_RS06780 07be91b7687f60ab14fc917f6cdf778f 488 PRINTS PR00175 Sodium/alanine symporter signature 218 237 1.4E-51 T 10-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CpPa04_RS06780 07be91b7687f60ab14fc917f6cdf778f 488 PRINTS PR00175 Sodium/alanine symporter signature 95 117 1.4E-51 T 10-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CpPa04_RS06780 07be91b7687f60ab14fc917f6cdf778f 488 TIGRFAM TIGR00835 agcS: amino acid carrier protein 17 445 9.1E-139 T 10-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CpPa04_RS09275 4420428461e66719fdba47458fe17ab6 92 Pfam PF11662 Protein of unknown function (DUF3263) 18 86 1.4E-26 T 10-03-2017 IPR021678 Protein of unknown function DUF3263 CpPa04_RS09295 34a844eba6bb51fea0766a0f72f105cd 497 SUPERFAMILY SSF56024 101 319 2.48E-42 T 10-03-2017 CpPa04_RS09295 34a844eba6bb51fea0766a0f72f105cd 497 SMART SM00155 219 246 0.0056 T 10-03-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CpPa04_RS09295 34a844eba6bb51fea0766a0f72f105cd 497 SMART SM00155 404 437 0.086 T 10-03-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CpPa04_RS09295 34a844eba6bb51fea0766a0f72f105cd 497 Pfam PF13091 PLD-like domain 332 460 2.1E-24 T 10-03-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 CpPa04_RS09295 34a844eba6bb51fea0766a0f72f105cd 497 Pfam PF13091 PLD-like domain 136 247 4.5E-14 T 10-03-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 CpPa04_RS09295 34a844eba6bb51fea0766a0f72f105cd 497 Gene3D G3DSA:3.30.870.10 113 322 8.6E-37 T 10-03-2017 CpPa04_RS09295 34a844eba6bb51fea0766a0f72f105cd 497 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 10 496 2.2E-90 T 10-03-2017 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 CpPa04_RS09295 34a844eba6bb51fea0766a0f72f105cd 497 Gene3D G3DSA:3.30.870.10 326 474 9.3E-34 T 10-03-2017 CpPa04_RS09295 34a844eba6bb51fea0766a0f72f105cd 497 SUPERFAMILY SSF56024 275 484 6.5E-41 T 10-03-2017 CpPa04_RS09295 34a844eba6bb51fea0766a0f72f105cd 497 Pfam PF13396 Phospholipase_D-nuclease N-terminal 31 60 1.3E-5 T 10-03-2017 IPR027379 Cardiolipin synthase N-terminal CpPa04_RS01625 7db5a26298ca6841aba40ecc962c5f3f 541 TIGRFAM TIGR03769 P_ac_wall_RPT: actinobacterial surface-anchored protein domain 226 268 8.1E-9 T 10-03-2017 IPR022435 Surface-anchored repeat, actinobacteria CpPa04_RS01625 7db5a26298ca6841aba40ecc962c5f3f 541 SUPERFAMILY SSF53807 45 134 1.96E-69 T 10-03-2017 CpPa04_RS01625 7db5a26298ca6841aba40ecc962c5f3f 541 SUPERFAMILY SSF53807 357 536 1.96E-69 T 10-03-2017 CpPa04_RS01625 7db5a26298ca6841aba40ecc962c5f3f 541 PRINTS PR00691 Adhesin B signature 68 86 3.2E-12 T 10-03-2017 IPR006129 Adhesin B GO:0007155 CpPa04_RS01625 7db5a26298ca6841aba40ecc962c5f3f 541 PRINTS PR00691 Adhesin B signature 87 106 3.2E-12 T 10-03-2017 IPR006129 Adhesin B GO:0007155 CpPa04_RS01625 7db5a26298ca6841aba40ecc962c5f3f 541 PRINTS PR00691 Adhesin B signature 43 64 3.2E-12 T 10-03-2017 IPR006129 Adhesin B GO:0007155 CpPa04_RS01625 7db5a26298ca6841aba40ecc962c5f3f 541 Gene3D G3DSA:3.40.50.1980 419 535 4.3E-28 T 10-03-2017 CpPa04_RS01625 7db5a26298ca6841aba40ecc962c5f3f 541 TIGRFAM TIGR03772 anch_rpt_subst: anchored repeat ABC transporter, substrate-binding protein 45 535 1.4E-214 T 10-03-2017 IPR022434 ABC transporter, LPXTG-anchor lipoprotein, actinobacteria CpPa04_RS01625 7db5a26298ca6841aba40ecc962c5f3f 541 Gene3D G3DSA:3.40.50.1980 359 418 1.9E-54 T 10-03-2017 CpPa04_RS01625 7db5a26298ca6841aba40ecc962c5f3f 541 Gene3D G3DSA:3.40.50.1980 45 151 1.9E-54 T 10-03-2017 CpPa04_RS01625 7db5a26298ca6841aba40ecc962c5f3f 541 PRINTS PR00690 Adhesin family signature 74 87 7.8E-12 T 10-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 CpPa04_RS01625 7db5a26298ca6841aba40ecc962c5f3f 541 PRINTS PR00690 Adhesin family signature 87 104 7.8E-12 T 10-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 CpPa04_RS01625 7db5a26298ca6841aba40ecc962c5f3f 541 PRINTS PR00690 Adhesin family signature 43 61 7.8E-12 T 10-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 CpPa04_RS01625 7db5a26298ca6841aba40ecc962c5f3f 541 Pfam PF01297 Zinc-uptake complex component A periplasmic 46 533 4.3E-79 T 10-03-2017 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CpPa04_RS09670 a7c0460f8e3690ad85e0bac8256817b8 288 TIGRFAM TIGR01076 sortase_fam: sortase 113 241 1.4E-49 T 10-03-2017 IPR005754 Sortase family CpPa04_RS09670 a7c0460f8e3690ad85e0bac8256817b8 288 Pfam PF04203 Sortase family 114 239 7.8E-29 T 10-03-2017 IPR005754 Sortase family CpPa04_RS09670 a7c0460f8e3690ad85e0bac8256817b8 288 Gene3D G3DSA:2.40.260.10 106 242 4.2E-47 T 10-03-2017 IPR023365 Sortase domain CpPa04_RS09670 a7c0460f8e3690ad85e0bac8256817b8 288 SUPERFAMILY SSF63817 105 241 3.92E-43 T 10-03-2017 IPR023365 Sortase domain CpPa04_RS10160 1654fd7c9dc3ac2e8a56d3260ed36066 106 SUPERFAMILY SSF101386 8 97 3.93E-24 T 10-03-2017 CpPa04_RS10160 1654fd7c9dc3ac2e8a56d3260ed36066 106 PIRSF PIRSF029826 1 106 1.2E-29 T 10-03-2017 IPR011394 NTP Pyrophosphohydrolase MazG-related, RS21-C6 CpPa04_RS10160 1654fd7c9dc3ac2e8a56d3260ed36066 106 Pfam PF12643 MazG-like family 32 103 3.3E-15 T 10-03-2017 IPR025984 MazG-like domain KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 CpPa04_RS10160 1654fd7c9dc3ac2e8a56d3260ed36066 106 Gene3D G3DSA:1.10.287.1080 6 87 2.3E-17 T 10-03-2017 CpPa04_RS01360 1d72f25cc2e9bbf384cc3879de847cdc 63 Pfam PF12728 Helix-turn-helix domain 9 57 2.4E-16 T 10-03-2017 CpPa04_RS01360 1d72f25cc2e9bbf384cc3879de847cdc 63 Gene3D G3DSA:1.10.10.10 9 56 2.7E-5 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS01360 1d72f25cc2e9bbf384cc3879de847cdc 63 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 9 56 6.2E-21 T 10-03-2017 IPR010093 SinI-like, DNA-binding domain GO:0003677 CpPa04_RS01360 1d72f25cc2e9bbf384cc3879de847cdc 63 SUPERFAMILY SSF46955 9 57 3.66E-6 T 10-03-2017 IPR009061 Putative DNA-binding domain CpPa04_RS08415 e99d68c3367c09c550b9b971f88dc0d9 126 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 52 120 6.6E-19 T 10-03-2017 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 CpPa04_RS08415 e99d68c3367c09c550b9b971f88dc0d9 126 SUPERFAMILY SSF54736 50 123 4.66E-22 T 10-03-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CpPa04_RS08415 e99d68c3367c09c550b9b971f88dc0d9 126 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 33 126 15.866 T 10-03-2017 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CpPa04_RS08415 e99d68c3367c09c550b9b971f88dc0d9 126 Gene3D G3DSA:3.30.1390.10 35 124 7.7E-26 T 10-03-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CpPa04_RS08855 dc70b94064f8f6f6ddb886dd8d199151 141 Pfam PF01230 HIT domain 13 101 1.1E-17 T 10-03-2017 IPR001310 Histidine triad (HIT) protein CpPa04_RS08855 dc70b94064f8f6f6ddb886dd8d199151 141 ProSitePatterns PS00892 HIT domain signature. 80 98 - T 10-03-2017 IPR019808 Histidine triad, conserved site CpPa04_RS08855 dc70b94064f8f6f6ddb886dd8d199151 141 Gene3D G3DSA:3.30.428.10 2 132 4.0E-28 T 10-03-2017 IPR011146 HIT-like domain GO:0003824 CpPa04_RS08855 dc70b94064f8f6f6ddb886dd8d199151 141 SUPERFAMILY SSF54197 3 133 2.17E-31 T 10-03-2017 IPR011146 HIT-like domain GO:0003824 CpPa04_RS08855 dc70b94064f8f6f6ddb886dd8d199151 141 PRINTS PR00332 Histidine triad family signature 4 20 7.5E-11 T 10-03-2017 IPR001310 Histidine triad (HIT) protein CpPa04_RS08855 dc70b94064f8f6f6ddb886dd8d199151 141 PRINTS PR00332 Histidine triad family signature 87 97 7.5E-11 T 10-03-2017 IPR001310 Histidine triad (HIT) protein CpPa04_RS08855 dc70b94064f8f6f6ddb886dd8d199151 141 PRINTS PR00332 Histidine triad family signature 25 43 7.5E-11 T 10-03-2017 IPR001310 Histidine triad (HIT) protein CpPa04_RS09995 797e9bf24ab6be1f0f6f6a8bc93e2668 398 SUPERFAMILY SSF51971 2 274 6.36E-45 T 10-03-2017 CpPa04_RS09995 797e9bf24ab6be1f0f6f6a8bc93e2668 398 SUPERFAMILY SSF51971 349 377 6.36E-45 T 10-03-2017 CpPa04_RS09995 797e9bf24ab6be1f0f6f6a8bc93e2668 398 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 4 382 1.7E-103 T 10-03-2017 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 CpPa04_RS09995 797e9bf24ab6be1f0f6f6a8bc93e2668 398 Pfam PF13450 NAD(P)-binding Rossmann-like domain 8 77 3.8E-17 T 10-03-2017 CpPa04_RS09995 797e9bf24ab6be1f0f6f6a8bc93e2668 398 Gene3D G3DSA:3.40.50.720 1 83 4.8E-47 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS09995 797e9bf24ab6be1f0f6f6a8bc93e2668 398 Gene3D G3DSA:3.40.50.720 187 264 4.8E-47 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS09995 797e9bf24ab6be1f0f6f6a8bc93e2668 398 Gene3D G3DSA:3.40.50.720 339 386 4.8E-47 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS09995 797e9bf24ab6be1f0f6f6a8bc93e2668 398 SUPERFAMILY SSF54373 255 328 7.06E-24 T 10-03-2017 CpPa04_RS09995 797e9bf24ab6be1f0f6f6a8bc93e2668 398 Pfam PF03275 UDP-galactopyranose mutase 152 364 7.3E-79 T 10-03-2017 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 CpPa04_RS08685 890640feafdf17da2dc797c7a1471bfe 522 Pfam PF00664 ABC transporter transmembrane region 46 278 4.5E-15 T 10-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CpPa04_RS08685 890640feafdf17da2dc797c7a1471bfe 522 SUPERFAMILY SSF90123 34 325 2.88E-33 T 10-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CpPa04_RS08685 890640feafdf17da2dc797c7a1471bfe 522 Gene3D G3DSA:1.20.1560.10 18 325 5.4E-29 T 10-03-2017 CpPa04_RS08685 890640feafdf17da2dc797c7a1471bfe 522 SMART SM00382 360 517 8.9E-7 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS08685 890640feafdf17da2dc797c7a1471bfe 522 Gene3D G3DSA:3.40.50.300 339 520 2.9E-33 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08685 890640feafdf17da2dc797c7a1471bfe 522 Pfam PF00005 ABC transporter 352 479 1.6E-16 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS08685 890640feafdf17da2dc797c7a1471bfe 522 SUPERFAMILY SSF52540 331 521 4.93E-31 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05135 857691fe2b6e283d52719f628476399c 195 SUPERFAMILY SSF53335 1 173 1.81E-30 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS05135 857691fe2b6e283d52719f628476399c 195 Gene3D G3DSA:3.40.50.150 13 193 1.1E-32 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS05135 857691fe2b6e283d52719f628476399c 195 Pfam PF13649 Methyltransferase domain 49 140 2.6E-16 T 10-03-2017 CpPa04_RS00960 64f817f971e60739d5cf55519ad46206 102 Pfam PF03334 Na+/H+ antiporter subunit 10 94 3.0E-10 T 10-03-2017 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 CpPa04_RS02270 affb4ff4cfd7afb563315fe01f316f32 269 SUPERFAMILY SSF81345 5 254 2.22E-17 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS02270 affb4ff4cfd7afb563315fe01f316f32 269 Pfam PF00950 ABC 3 transport family 9 257 3.8E-35 T 10-03-2017 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CpPa04_RS07000 d572f07ebce0851930ee7fbaa01daa59 307 SUPERFAMILY SSF55120 77 305 3.68E-69 T 10-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CpPa04_RS07000 d572f07ebce0851930ee7fbaa01daa59 307 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 13 305 6.3E-85 T 10-03-2017 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CpPa04_RS07000 d572f07ebce0851930ee7fbaa01daa59 307 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 10-03-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CpPa04_RS07000 d572f07ebce0851930ee7fbaa01daa59 307 Gene3D G3DSA:3.10.290.10 15 58 6.3E-5 T 10-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 CpPa04_RS07000 d572f07ebce0851930ee7fbaa01daa59 307 Pfam PF00849 RNA pseudouridylate synthase 89 243 3.2E-30 T 10-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CpPa04_RS07000 d572f07ebce0851930ee7fbaa01daa59 307 SUPERFAMILY SSF55174 15 66 4.94E-5 T 10-03-2017 CpPa04_RS04170 4a8007e89e8daaabcc1a1c889ef621a0 175 Pfam PF04264 YceI-like domain 8 169 1.0E-40 T 10-03-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CpPa04_RS04170 4a8007e89e8daaabcc1a1c889ef621a0 175 SUPERFAMILY SSF101874 6 174 1.44E-52 T 10-03-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CpPa04_RS04170 4a8007e89e8daaabcc1a1c889ef621a0 175 Gene3D G3DSA:2.40.128.110 6 174 9.9E-57 T 10-03-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CpPa04_RS04170 4a8007e89e8daaabcc1a1c889ef621a0 175 SMART SM00867 7 172 6.6E-62 T 10-03-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CpPa04_RS09040 c037c2967799006da83232d44cc0117d 330 Gene3D G3DSA:3.90.245.10 2 322 1.1E-110 T 10-03-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CpPa04_RS09040 c037c2967799006da83232d44cc0117d 330 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 7 17 - T 10-03-2017 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 CpPa04_RS09040 c037c2967799006da83232d44cc0117d 330 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 2 313 4.5E-76 T 10-03-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CpPa04_RS09040 c037c2967799006da83232d44cc0117d 330 SUPERFAMILY SSF53590 2 321 1.83E-98 T 10-03-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CpPa04_RS10020 571dd326eafa1002d1ab87bedf240461 278 Gene3D G3DSA:3.40.50.1000 11 82 1.0E-51 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS10020 571dd326eafa1002d1ab87bedf240461 278 Gene3D G3DSA:3.40.50.1000 182 278 1.0E-51 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS10020 571dd326eafa1002d1ab87bedf240461 278 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 14 274 3.4E-50 T 10-03-2017 IPR000150 Cof protein GO:0016787 CpPa04_RS10020 571dd326eafa1002d1ab87bedf240461 278 SUPERFAMILY SSF56784 11 278 1.82E-63 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS10020 571dd326eafa1002d1ab87bedf240461 278 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 14 247 7.9E-23 T 10-03-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CpPa04_RS10020 571dd326eafa1002d1ab87bedf240461 278 Pfam PF08282 haloacid dehalogenase-like hydrolase 15 274 1.3E-60 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS09595 62eb63cc130ff6570e3bf43489aef442 244 SUPERFAMILY SSF52540 15 240 5.46E-74 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09595 62eb63cc130ff6570e3bf43489aef442 244 Pfam PF00005 ABC transporter 38 184 9.9E-32 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS09595 62eb63cc130ff6570e3bf43489aef442 244 SMART SM00382 45 240 7.8E-16 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS09595 62eb63cc130ff6570e3bf43489aef442 244 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS09595 62eb63cc130ff6570e3bf43489aef442 244 Gene3D G3DSA:3.40.50.300 14 236 1.0E-70 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS03775 afa5f82a00bd147c509028aa7260f065 341 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 30 309 4.2E-96 T 10-03-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 CpPa04_RS03775 afa5f82a00bd147c509028aa7260f065 341 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 28 312 37.395 T 10-03-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 CpPa04_RS03775 afa5f82a00bd147c509028aa7260f065 341 Pfam PF02401 LytB protein 30 308 3.4E-89 T 10-03-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 CpPa04_RS07220 1bf733b3d8d976e789f5ec1b31b14ec7 406 SUPERFAMILY SSF50022 322 404 6.81E-28 T 10-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CpPa04_RS07220 1bf733b3d8d976e789f5ec1b31b14ec7 406 Gene3D G3DSA:2.102.10.10 163 192 8.4E-45 T 10-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CpPa04_RS07220 1bf733b3d8d976e789f5ec1b31b14ec7 406 Gene3D G3DSA:2.102.10.10 243 404 8.4E-45 T 10-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CpPa04_RS07220 1bf733b3d8d976e789f5ec1b31b14ec7 406 Pfam PF00355 Rieske [2Fe-2S] domain 314 378 1.6E-11 T 10-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CpPa04_RS01025 65cdf1f5f4675352266d3c54de7cf797 312 Gene3D G3DSA:3.60.21.10 65 263 8.0E-15 T 10-03-2017 IPR029052 Metallo-dependent phosphatase-like CpPa04_RS01025 65cdf1f5f4675352266d3c54de7cf797 312 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 67 251 1.1E-7 T 10-03-2017 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 CpPa04_RS01025 65cdf1f5f4675352266d3c54de7cf797 312 SUPERFAMILY SSF56300 64 310 6.69E-25 T 10-03-2017 IPR029052 Metallo-dependent phosphatase-like CpPa04_RS00495 ab9a6df0cb2320d54a962a9035dc4de5 300 Pfam PF13367 Protease prsW family 77 268 1.7E-41 T 10-03-2017 IPR026898 Protease PrsW GO:0008233 CpPa04_RS09845 add096e52c2453d9e03e28c446d8993d 1071 Pfam PF11847 Domain of unknown function (DUF3367) 23 627 2.0E-219 T 10-03-2017 IPR021798 Protein of unknown function DUF3367 MetaCyc: PWY-6397 CpPa04_RS01805 e7112b01e23a15cbfb89a3c03127bb40 120 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 10 112 4.5E-47 T 10-03-2017 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS01805 e7112b01e23a15cbfb89a3c03127bb40 120 Gene3D G3DSA:3.90.470.10 7 116 3.8E-42 T 10-03-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CpPa04_RS01805 e7112b01e23a15cbfb89a3c03127bb40 120 Pfam PF00237 Ribosomal protein L22p/L17e 13 113 4.0E-31 T 10-03-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CpPa04_RS01805 e7112b01e23a15cbfb89a3c03127bb40 120 SUPERFAMILY SSF54843 6 116 2.75E-41 T 10-03-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CpPa04_RS01805 e7112b01e23a15cbfb89a3c03127bb40 120 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 6 115 29.04 T 10-03-2017 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS02575 00efa9a4bc777765e82eea35bfc6442b 133 Pfam PF12005 Protein of unknown function (DUF3499) 7 128 1.1E-45 T 10-03-2017 IPR021888 Protein of unknown function DUF3499 CpPa04_RS09675 d4a6e8fa55028f0c1390a02112857870 453 Pfam PF01594 Domain of unknown function DUF20 69 385 8.3E-62 T 10-03-2017 IPR002549 Transmembrane protein TqsA-like CpPa04_RS02400 c02f3873c247bb2e996cc97844462080 211 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 205 1.0E-67 T 10-03-2017 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CpPa04_RS02400 c02f3873c247bb2e996cc97844462080 211 Pfam PF14681 Uracil phosphoribosyltransferase 6 205 5.2E-58 T 10-03-2017 IPR029057 Phosphoribosyltransferase-like CpPa04_RS02400 c02f3873c247bb2e996cc97844462080 211 SUPERFAMILY SSF53271 4 205 3.02E-59 T 10-03-2017 IPR029057 Phosphoribosyltransferase-like CpPa04_RS02400 c02f3873c247bb2e996cc97844462080 211 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 207 39.277 T 10-03-2017 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CpPa04_RS02400 c02f3873c247bb2e996cc97844462080 211 Gene3D G3DSA:3.40.50.2020 2 205 5.3E-66 T 10-03-2017 IPR029057 Phosphoribosyltransferase-like CpPa04_RS06675 95d44a6f9b2f4383419f5da8fe501235 391 SUPERFAMILY SSF102405 104 302 3.43E-25 T 10-03-2017 CpPa04_RS06675 95d44a6f9b2f4383419f5da8fe501235 391 Pfam PF02481 DNA recombination-mediator protein A 74 297 2.7E-65 T 10-03-2017 IPR003488 DNA recombination-mediator protein A GO:0009294 CpPa04_RS06675 95d44a6f9b2f4383419f5da8fe501235 391 Gene3D G3DSA:3.40.50.450 131 311 1.7E-11 T 10-03-2017 CpPa04_RS04705 3d20bcb7703aec818f0a1001a81fb3bd 318 Gene3D G3DSA:1.10.3720.10 54 272 1.0E-44 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS04705 3d20bcb7703aec818f0a1001a81fb3bd 318 SUPERFAMILY SSF161098 56 256 9.29E-41 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS04705 3d20bcb7703aec818f0a1001a81fb3bd 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 268 6.9E-19 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS04705 3d20bcb7703aec818f0a1001a81fb3bd 318 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 57 164 1.3E-15 T 10-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CpPa04_RS06635 2c20db1300e76b950122118d12b27e39 141 Pfam PF06305 Protein of unknown function (DUF1049) 90 139 2.7E-8 T 10-03-2017 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 CpPa04_RS01040 8af1c97a9b61b26042be3d34193e7ce5 115 Pfam PF02467 Transcription factor WhiB 30 91 6.2E-22 T 10-03-2017 IPR003482 Transcription factor WhiB CpPa04_RS01040 8af1c97a9b61b26042be3d34193e7ce5 115 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 6 97 16.451 T 10-03-2017 IPR003482 Transcription factor WhiB CpPa04_RS02880 d2b4effdcf12dd1bc3195cb4b9c7e2d9 493 SUPERFAMILY SSF89000 299 452 5.1E-51 T 10-03-2017 CpPa04_RS02880 d2b4effdcf12dd1bc3195cb4b9c7e2d9 493 Pfam PF00682 HMGL-like 6 272 4.2E-44 T 10-03-2017 IPR000891 Pyruvate carboxyltransferase GO:0003824 CpPa04_RS02880 d2b4effdcf12dd1bc3195cb4b9c7e2d9 493 SUPERFAMILY SSF51569 3 296 3.48E-84 T 10-03-2017 CpPa04_RS02880 d2b4effdcf12dd1bc3195cb4b9c7e2d9 493 Gene3D G3DSA:3.20.20.70 3 286 1.4E-107 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS02880 d2b4effdcf12dd1bc3195cb4b9c7e2d9 493 Pfam PF02436 Conserved carboxylase domain 294 482 3.9E-49 T 10-03-2017 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 CpPa04_RS08035 2714831daee2e89117a5645bb20410b0 101 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 101 21.349 T 10-03-2017 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS08035 2714831daee2e89117a5645bb20410b0 101 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 4.6E-28 T 10-03-2017 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS08035 2714831daee2e89117a5645bb20410b0 101 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 10-03-2017 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS08035 2714831daee2e89117a5645bb20410b0 101 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 3.6E-36 T 10-03-2017 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS08035 2714831daee2e89117a5645bb20410b0 101 SUPERFAMILY SSF141091 1 100 7.72E-34 T 10-03-2017 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS03020 0dcadf25e6b632a6e7723701ab857957 768 Pfam PF13625 Helicase conserved C-terminal domain 489 610 1.5E-33 T 10-03-2017 IPR032830 Helicase XPB/Ssl2, N-terminal domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 CpPa04_RS05465 057321f2e3854d126c2030789c7a4a90 260 ProDom PD040491 SCO1799 RV1486C/MT1533 MB1522C CGL1536 ML1804 MAV321 6 257 1.0E-49 T 10-03-2017 CpPa04_RS05060 9c768ecda8dc0999dcf8f07060acf55d 129 SUPERFAMILY SSF54427 28 128 9.64E-29 T 10-03-2017 IPR032710 NTF2-like domain CpPa04_RS05060 9c768ecda8dc0999dcf8f07060acf55d 129 Gene3D G3DSA:3.10.450.50 7 128 2.8E-36 T 10-03-2017 IPR032710 NTF2-like domain CpPa04_RS07680 42dbc28bf368b33265989bc107fb26d6 223 Gene3D G3DSA:3.40.50.620 32 155 3.0E-8 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS07680 42dbc28bf368b33265989bc107fb26d6 223 Pfam PF02698 DUF218 domain 33 171 5.5E-19 T 10-03-2017 IPR003848 Domain of unknown function DUF218 CpPa04_RS05355 a821af48cb1cf38f1f8505e058a1061b 299 Pfam PF00248 Aldo/keto reductase family 16 288 6.6E-38 T 10-03-2017 IPR023210 NADP-dependent oxidoreductase domain CpPa04_RS05355 a821af48cb1cf38f1f8505e058a1061b 299 Gene3D G3DSA:3.20.20.100 9 296 2.0E-52 T 10-03-2017 IPR023210 NADP-dependent oxidoreductase domain CpPa04_RS05355 a821af48cb1cf38f1f8505e058a1061b 299 SUPERFAMILY SSF51430 5 297 3.01E-54 T 10-03-2017 IPR023210 NADP-dependent oxidoreductase domain CpPa04_RS09805 caa157d719a32e367136d6e4f3eae165 221 Pfam PF06197 Protein of unknown function (DUF998) 11 201 1.1E-20 T 10-03-2017 IPR009339 Protein of unknown function DUF998 CpPa04_RS02710 03857e5fe74a732860eaca6d85d49045 285 Gene3D G3DSA:3.40.50.1110 30 284 5.5E-32 T 10-03-2017 IPR013830 SGNH hydrolase-type esterase domain CpPa04_RS02710 03857e5fe74a732860eaca6d85d49045 285 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 38 277 7.3E-17 T 10-03-2017 IPR013830 SGNH hydrolase-type esterase domain CpPa04_RS02710 03857e5fe74a732860eaca6d85d49045 285 SUPERFAMILY SSF52266 33 284 2.17E-34 T 10-03-2017 IPR013830 SGNH hydrolase-type esterase domain CpPa04_RS07800 4b4d0bc8194c5545f982822978827c86 692 Pfam PF01432 Peptidase family M3 232 686 3.8E-103 T 10-03-2017 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 CpPa04_RS07800 4b4d0bc8194c5545f982822978827c86 692 Gene3D G3DSA:1.20.1050.40 15 142 6.9E-18 T 10-03-2017 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal CpPa04_RS07800 4b4d0bc8194c5545f982822978827c86 692 Gene3D G3DSA:1.10.1370.10 501 687 7.1E-100 T 10-03-2017 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CpPa04_RS07800 4b4d0bc8194c5545f982822978827c86 692 Gene3D G3DSA:1.10.1370.10 143 348 7.1E-100 T 10-03-2017 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CpPa04_RS07800 4b4d0bc8194c5545f982822978827c86 692 SUPERFAMILY SSF55486 6 686 1.22E-148 T 10-03-2017 CpPa04_RS07800 4b4d0bc8194c5545f982822978827c86 692 Gene3D G3DSA:3.40.390.10 357 500 1.3E-44 T 10-03-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CpPa04_RS10480 13a77aeb5c62a3382e801ead94421fc3 321 Gene3D G3DSA:1.10.3720.10 92 311 1.7E-14 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS10480 13a77aeb5c62a3382e801ead94421fc3 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 319 1.4E-34 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS10480 13a77aeb5c62a3382e801ead94421fc3 321 SUPERFAMILY SSF161098 93 305 3.53E-18 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS05185 d25d15ff22a51681eac1137f68f5017c 518 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 11 485 16.159 T 10-03-2017 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 CpPa04_RS05185 d25d15ff22a51681eac1137f68f5017c 518 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 69 447 4.6E-85 T 10-03-2017 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 CpPa04_RS05185 d25d15ff22a51681eac1137f68f5017c 518 Gene3D G3DSA:3.60.110.10 210 476 3.3E-34 T 10-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CpPa04_RS05185 d25d15ff22a51681eac1137f68f5017c 518 Pfam PF00795 Carbon-nitrogen hydrolase 218 466 6.1E-19 T 10-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CpPa04_RS05185 d25d15ff22a51681eac1137f68f5017c 518 SUPERFAMILY SSF56317 215 478 2.35E-41 T 10-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CpPa04_RS01695 e15fb385f6b0255bdc449df36d270c38 320 Pfam PF03773 Predicted permease 38 309 8.5E-56 T 10-03-2017 IPR005524 Predicted permease DUF318 CpPa04_RS00295 a7ad9c739d7803f0ee072f6fc1593a82 55 Pfam PF14013 MT0933-like antitoxin protein 5 52 2.7E-17 T 10-03-2017 IPR028037 Antitoxin Rv0909/MT0933 CpPa04_RS05560 34209f50ffc8753713b4589654295feb 257 Pfam PF01022 Bacterial regulatory protein, arsR family 34 79 2.9E-6 T 10-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CpPa04_RS05560 34209f50ffc8753713b4589654295feb 257 SUPERFAMILY SSF46785 33 221 3.09E-28 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS05560 34209f50ffc8753713b4589654295feb 257 Gene3D G3DSA:1.10.10.10 35 138 1.1E-19 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS06475 5cefa1c887666f3fc094317e2ae0d13a 291 Gene3D G3DSA:3.60.21.10 4 69 1.6E-18 T 10-03-2017 IPR029052 Metallo-dependent phosphatase-like CpPa04_RS06475 5cefa1c887666f3fc094317e2ae0d13a 291 Gene3D G3DSA:3.60.21.10 161 250 1.6E-18 T 10-03-2017 IPR029052 Metallo-dependent phosphatase-like CpPa04_RS06475 5cefa1c887666f3fc094317e2ae0d13a 291 SUPERFAMILY SSF56300 157 245 8.47E-24 T 10-03-2017 IPR029052 Metallo-dependent phosphatase-like CpPa04_RS06475 5cefa1c887666f3fc094317e2ae0d13a 291 SUPERFAMILY SSF56300 5 118 8.47E-24 T 10-03-2017 IPR029052 Metallo-dependent phosphatase-like CpPa04_RS06475 5cefa1c887666f3fc094317e2ae0d13a 291 Pfam PF00149 Calcineurin-like phosphoesterase 4 227 1.2E-14 T 10-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 CpPa04_RS00375 7fff960dc8c7055bf8eb982af764fdae 556 Pfam PF05960 Bacterial protein of unknown function (DUF885) 30 552 1.0E-141 T 10-03-2017 IPR010281 Protein of unknown function DUF885 CpPa04_RS05885 e8dfa35fd029af19655496b83e35200d 468 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 459 3.0E-174 T 10-03-2017 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CpPa04_RS05885 e8dfa35fd029af19655496b83e35200d 468 SUPERFAMILY SSF143548 17 150 1.12E-32 T 10-03-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CpPa04_RS05885 e8dfa35fd029af19655496b83e35200d 468 Pfam PF03315 Serine dehydratase beta chain 4 148 2.8E-40 T 10-03-2017 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CpPa04_RS05885 e8dfa35fd029af19655496b83e35200d 468 Pfam PF03313 Serine dehydratase alpha chain 190 456 5.3E-92 T 10-03-2017 IPR005130 Serine dehydratase-like, alpha subunit CpPa04_RS05885 e8dfa35fd029af19655496b83e35200d 468 Gene3D G3DSA:3.30.1330.90 11 150 3.3E-38 T 10-03-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CpPa04_RS07915 db96cccef8496b825846611b6c45699a 144 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 114 8.1E-9 T 10-03-2017 IPR000914 Solute-binding protein family 5 domain CpPa04_RS07915 db96cccef8496b825846611b6c45699a 144 Gene3D G3DSA:3.90.76.10 50 115 3.8E-14 T 10-03-2017 CpPa04_RS07915 db96cccef8496b825846611b6c45699a 144 SUPERFAMILY SSF53850 31 115 5.79E-17 T 10-03-2017 CpPa04_RS05000 ce0bbd474fc5298d79b17dbdd228a695 898 SUPERFAMILY SSF144091 73 247 8.11E-6 T 10-03-2017 CpPa04_RS05000 ce0bbd474fc5298d79b17dbdd228a695 898 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 540 858 1.1E-73 T 10-03-2017 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal CpPa04_RS04320 55027fadb678bf46a09c11e801a40eaa 123 Gene3D G3DSA:2.60.15.10 4 90 8.9E-26 T 10-03-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 CpPa04_RS04320 55027fadb678bf46a09c11e801a40eaa 123 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 119 6.3E-26 T 10-03-2017 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 CpPa04_RS04320 55027fadb678bf46a09c11e801a40eaa 123 SUPERFAMILY SSF51344 4 87 1.2E-20 T 10-03-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 CpPa04_RS04320 55027fadb678bf46a09c11e801a40eaa 123 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 89 3.0E-38 T 10-03-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 CpPa04_RS04320 55027fadb678bf46a09c11e801a40eaa 123 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 84 5.5E-25 T 10-03-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 CpPa04_RS04320 55027fadb678bf46a09c11e801a40eaa 123 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 123 18.703 T 10-03-2017 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 CpPa04_RS00330 cfaf0d423f41866f75f74e6c2f348ea7 378 Gene3D G3DSA:3.20.20.80 38 241 9.2E-66 T 10-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CpPa04_RS00330 cfaf0d423f41866f75f74e6c2f348ea7 378 Pfam PF01183 Glycosyl hydrolases family 25 40 219 5.0E-46 T 10-03-2017 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 CpPa04_RS00330 cfaf0d423f41866f75f74e6c2f348ea7 378 SMART SM00641 37 146 1.1E-4 T 10-03-2017 IPR018077 Glycoside hydrolase, family 25 subgroup CpPa04_RS00330 cfaf0d423f41866f75f74e6c2f348ea7 378 SUPERFAMILY SSF51445 39 240 2.04E-55 T 10-03-2017 IPR017853 Glycoside hydrolase superfamily CpPa04_RS03040 0d364ef2650609652dbccdd7389bc7ed 175 Pfam PF10969 Protein of unknown function (DUF2771) 14 171 5.1E-48 T 10-03-2017 IPR024495 Protein of unknown function DUF2771 CpPa04_RS07040 e4fc35247eb5ee70e84ba4fa6008f92c 338 Pfam PF05103 DivIVA protein 3 69 2.0E-8 T 10-03-2017 IPR007793 DivIVA family CpPa04_RS07040 e4fc35247eb5ee70e84ba4fa6008f92c 338 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 39 7.3E-15 T 10-03-2017 IPR019933 DivIVA domain CpPa04_RS03530 0329db0d6ef01fca7679dbcd0355ab5c 339 PIRSF PIRSF006431 1 337 3.8E-115 T 10-03-2017 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 CpPa04_RS03530 0329db0d6ef01fca7679dbcd0355ab5c 339 Pfam PF00561 alpha/beta hydrolase fold 37 319 1.7E-30 T 10-03-2017 IPR000073 Alpha/beta hydrolase fold-1 CpPa04_RS03530 0329db0d6ef01fca7679dbcd0355ab5c 339 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 21 333 3.3E-111 T 10-03-2017 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 CpPa04_RS03530 0329db0d6ef01fca7679dbcd0355ab5c 339 SUPERFAMILY SSF53474 5 320 1.66E-56 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS03530 0329db0d6ef01fca7679dbcd0355ab5c 339 Gene3D G3DSA:3.40.50.1820 10 326 3.7E-62 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS03530 0329db0d6ef01fca7679dbcd0355ab5c 339 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 114 128 2.6E-12 T 10-03-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CpPa04_RS03530 0329db0d6ef01fca7679dbcd0355ab5c 339 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 36 44 2.6E-12 T 10-03-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CpPa04_RS03530 0329db0d6ef01fca7679dbcd0355ab5c 339 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 62 73 2.6E-12 T 10-03-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CpPa04_RS10215 178c54abd8f3f3e7754f60a8133349e1 242 Pfam PF02592 Putative vitamin uptake transporter 71 231 8.6E-45 T 10-03-2017 IPR003744 Protein of unknown function DUF165 CpPa04_RS10215 178c54abd8f3f3e7754f60a8133349e1 242 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 43 238 4.8E-35 T 10-03-2017 IPR003744 Protein of unknown function DUF165 CpPa04_RS10280 9de7b7e2c394accf6c794994696cef87 122 PIRSF PIRSF000077 1 104 1.7E-28 T 10-03-2017 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CpPa04_RS10280 9de7b7e2c394accf6c794994696cef87 122 Gene3D G3DSA:3.40.30.10 4 102 2.3E-31 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS10280 9de7b7e2c394accf6c794994696cef87 122 SUPERFAMILY SSF52833 4 103 1.11E-31 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS10280 9de7b7e2c394accf6c794994696cef87 122 Pfam PF00085 Thioredoxin 4 100 2.2E-24 T 10-03-2017 IPR013766 Thioredoxin domain GO:0045454 CpPa04_RS10280 9de7b7e2c394accf6c794994696cef87 122 PRINTS PR00421 Thioredoxin family signature 29 38 1.4E-7 T 10-03-2017 CpPa04_RS10280 9de7b7e2c394accf6c794994696cef87 122 PRINTS PR00421 Thioredoxin family signature 21 29 1.4E-7 T 10-03-2017 CpPa04_RS10280 9de7b7e2c394accf6c794994696cef87 122 PRINTS PR00421 Thioredoxin family signature 68 79 1.4E-7 T 10-03-2017 CpPa04_RS10280 9de7b7e2c394accf6c794994696cef87 122 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 102 4.8E-30 T 10-03-2017 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CpPa04_RS02600 b1c65c81bb229973b96aa77f1e6f130d 117 Pfam PF14078 Domain of unknown function (DUF4259) 3 106 3.0E-5 T 10-03-2017 IPR025355 Protein of unknown function DUF4259 CpPa04_RS02570 3f78d9578d9c6d8e87bde839a2566345 151 SUPERFAMILY SSF55486 26 147 8.42E-21 T 10-03-2017 CpPa04_RS09015 727631142ad48f8411ee52f0bad81dd5 425 Pfam PF06738 Putative threonine/serine exporter 15 256 1.4E-47 T 10-03-2017 IPR010619 Putative threonine/serine exporter CpPa04_RS09015 727631142ad48f8411ee52f0bad81dd5 425 Pfam PF12821 Threonine/Serine exporter, ThrE 279 404 7.0E-21 T 10-03-2017 IPR024528 Threonine/Serine exporter, ThrE CpPa04_RS04895 fc68a8440cadc3c0744bc19d3c2dab21 327 SUPERFAMILY SSF56784 8 256 8.74E-53 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS04895 fc68a8440cadc3c0744bc19d3c2dab21 327 Pfam PF13242 HAD-hyrolase-like 183 255 4.1E-13 T 10-03-2017 CpPa04_RS04895 fc68a8440cadc3c0744bc19d3c2dab21 327 Gene3D G3DSA:3.40.50.1000 3 80 6.3E-33 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS04895 fc68a8440cadc3c0744bc19d3c2dab21 327 Gene3D G3DSA:3.40.50.1000 183 257 6.3E-33 T 10-03-2017 IPR023214 HAD-like domain CpPa04_RS04895 fc68a8440cadc3c0744bc19d3c2dab21 327 Gene3D G3DSA:3.40.50.10410 86 182 1.1E-24 T 10-03-2017 IPR023215 Nitrophenylphosphatase-like domain CpPa04_RS04895 fc68a8440cadc3c0744bc19d3c2dab21 327 Pfam PF13344 Haloacid dehalogenase-like hydrolase 11 107 1.7E-20 T 10-03-2017 IPR006357 HAD-superfamily hydrolase, subfamily IIA CpPa04_RS04895 fc68a8440cadc3c0744bc19d3c2dab21 327 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 11 230 3.1E-32 T 10-03-2017 IPR006357 HAD-superfamily hydrolase, subfamily IIA CpPa04_RS08190 e274affb0f67ddff9af55a6050ecb227 512 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 154 465 1.6E-54 T 10-03-2017 IPR003776 YcaO-like domain CpPa04_RS08190 e274affb0f67ddff9af55a6050ecb227 512 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 155 465 2.2E-23 T 10-03-2017 IPR003776 YcaO-like domain CpPa04_RS03140 2a76e6e086c71c2dc74f81d3b6817396 472 Pfam PF01554 MatE 24 190 8.0E-11 T 10-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CpPa04_RS03140 2a76e6e086c71c2dc74f81d3b6817396 472 Pfam PF01554 MatE 264 424 1.1E-18 T 10-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CpPa04_RS03140 2a76e6e086c71c2dc74f81d3b6817396 472 TIGRFAM TIGR00797 matE: MATE efflux family protein 24 440 3.5E-45 T 10-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CpPa04_RS08155 4538082cdc6ffd879a243665619d3ace 130 Pfam PF01152 Bacterial-like globin 6 121 3.6E-34 T 10-03-2017 IPR001486 Truncated hemoglobin GO:0019825 CpPa04_RS08155 4538082cdc6ffd879a243665619d3ace 130 Gene3D G3DSA:1.10.490.10 4 128 3.9E-44 T 10-03-2017 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 CpPa04_RS08155 4538082cdc6ffd879a243665619d3ace 130 SUPERFAMILY SSF46458 5 128 8.22E-39 T 10-03-2017 IPR009050 Globin-like CpPa04_RS10320 d91566596eac2f391c94bac99413eb67 189 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 7 189 2.5E-30 T 10-03-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CpPa04_RS10320 d91566596eac2f391c94bac99413eb67 189 Gene3D G3DSA:2.40.50.140 7 117 6.8E-41 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS10320 d91566596eac2f391c94bac99413eb67 189 Pfam PF00436 Single-strand binding protein family 8 107 1.9E-29 T 10-03-2017 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CpPa04_RS10320 d91566596eac2f391c94bac99413eb67 189 SUPERFAMILY SSF50249 8 189 8.0E-47 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS10320 d91566596eac2f391c94bac99413eb67 189 Hamap MF_00984 Single-stranded DNA-binding protein. 5 114 29.991 T 10-03-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CpPa04_RS05815 cb8b8b04855153ace5622d6baefbfdad 176 Pfam PF01478 Type IV leader peptidase family 21 118 2.2E-9 T 10-03-2017 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 CpPa04_RS09250 8b2d9750e39b9b6db4b264d422b48164 90 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 36 85 7.8E-13 T 10-03-2017 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 CpPa04_RS05345 d4f0fbfbf1db809b9c410c181a43aa5a 416 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 33 338 4.3E-88 T 10-03-2017 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 CpPa04_RS05345 d4f0fbfbf1db809b9c410c181a43aa5a 416 Hamap MF_01697 L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [mshC]. 9 416 50.018 T 10-03-2017 IPR017812 Mycothiol ligase MshC GO:0010125|GO:0035446 CpPa04_RS05345 d4f0fbfbf1db809b9c410c181a43aa5a 416 Gene3D G3DSA:3.40.50.620 36 330 1.1E-74 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS05345 d4f0fbfbf1db809b9c410c181a43aa5a 416 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 245 266 1.0E-23 T 10-03-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CpPa04_RS05345 d4f0fbfbf1db809b9c410c181a43aa5a 416 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 41 52 1.0E-23 T 10-03-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CpPa04_RS05345 d4f0fbfbf1db809b9c410c181a43aa5a 416 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 77 86 1.0E-23 T 10-03-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CpPa04_RS05345 d4f0fbfbf1db809b9c410c181a43aa5a 416 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 214 232 1.0E-23 T 10-03-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CpPa04_RS05345 d4f0fbfbf1db809b9c410c181a43aa5a 416 TIGRFAM TIGR03447 mycothiol_MshC: cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase 2 416 2.3E-212 T 10-03-2017 IPR017812 Mycothiol ligase MshC GO:0010125|GO:0035446 CpPa04_RS05345 d4f0fbfbf1db809b9c410c181a43aa5a 416 SUPERFAMILY SSF52374 32 338 3.84E-72 T 10-03-2017 CpPa04_RS00500 422cced79014784db3504ff4d2c43ad1 291 Gene3D G3DSA:3.40.190.120 137 233 1.0E-27 T 10-03-2017 CpPa04_RS00500 422cced79014784db3504ff4d2c43ad1 291 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 32 290 6.5E-51 T 10-03-2017 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 CpPa04_RS00500 422cced79014784db3504ff4d2c43ad1 291 Gene3D G3DSA:3.40.190.10 29 136 2.3E-40 T 10-03-2017 CpPa04_RS00500 422cced79014784db3504ff4d2c43ad1 291 Gene3D G3DSA:3.40.190.10 244 291 2.3E-40 T 10-03-2017 CpPa04_RS00500 422cced79014784db3504ff4d2c43ad1 291 SUPERFAMILY SSF53850 32 291 6.67E-49 T 10-03-2017 CpPa04_RS06480 b8adc5bc2b8b02a064e70ce168e4d4ea 451 PIRSF PIRSF006603 18 450 7.8E-50 T 10-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CpPa04_RS06480 b8adc5bc2b8b02a064e70ce168e4d4ea 451 TIGRFAM TIGR00797 matE: MATE efflux family protein 36 422 1.2E-79 T 10-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CpPa04_RS06480 b8adc5bc2b8b02a064e70ce168e4d4ea 451 Pfam PF01554 MatE 251 407 1.2E-16 T 10-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CpPa04_RS06480 b8adc5bc2b8b02a064e70ce168e4d4ea 451 Pfam PF01554 MatE 36 194 7.6E-23 T 10-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CpPa04_RS01140 a2d9292728eaf2ad05b6476965c24b8a 110 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 13 60 1.0E-5 T 10-03-2017 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal CpPa04_RS01140 a2d9292728eaf2ad05b6476965c24b8a 110 TIGRFAM TIGR03816 tadE_like_DECH: helicase/secretion neighborhood TadE-like protein 12 109 6.9E-19 T 10-03-2017 IPR021202 Helicase/secretion neighbourhood TadE-like protein CpPa04_RS04775 4f990fe3616a015e5c7d99f61b3e30e9 201 Gene3D G3DSA:3.60.15.10 11 182 1.7E-40 T 10-03-2017 IPR001279 Metallo-beta-lactamase CpPa04_RS04775 4f990fe3616a015e5c7d99f61b3e30e9 201 SMART SM00849 17 180 7.4E-24 T 10-03-2017 IPR001279 Metallo-beta-lactamase CpPa04_RS04775 4f990fe3616a015e5c7d99f61b3e30e9 201 SUPERFAMILY SSF56281 9 197 4.06E-39 T 10-03-2017 IPR001279 Metallo-beta-lactamase CpPa04_RS04775 4f990fe3616a015e5c7d99f61b3e30e9 201 Pfam PF00753 Metallo-beta-lactamase superfamily 18 180 2.0E-16 T 10-03-2017 IPR001279 Metallo-beta-lactamase CpPa04_RS03270 d695a3f35a94fa7f9affe5a0fc514cc1 237 SUPERFAMILY SSF51261 102 230 7.85E-45 T 10-03-2017 IPR011055 Duplicated hybrid motif CpPa04_RS03270 d695a3f35a94fa7f9affe5a0fc514cc1 237 Gene3D G3DSA:2.70.70.10 96 231 1.9E-41 T 10-03-2017 CpPa04_RS03270 d695a3f35a94fa7f9affe5a0fc514cc1 237 Pfam PF01551 Peptidase family M23 131 226 1.0E-28 T 10-03-2017 IPR016047 Peptidase M23 CpPa04_RS08245 cdff8cb176e2cc62915b48d1e6b62276 66 Pfam PF04328 Protein of unknown function (DUF466) 9 66 2.1E-20 T 10-03-2017 IPR007423 Protein of unknown function DUF466 CpPa04_RS03235 92191546a075ed6103a9b5749a6e82bc 211 SUPERFAMILY SSF52141 37 201 1.22E-27 T 10-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CpPa04_RS03235 92191546a075ed6103a9b5749a6e82bc 211 Pfam PF03167 Uracil DNA glycosylase superfamily 37 198 4.7E-19 T 10-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CpPa04_RS03235 92191546a075ed6103a9b5749a6e82bc 211 Gene3D G3DSA:3.40.470.10 37 200 1.5E-37 T 10-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CpPa04_RS08765 b6a7bdd910196aae3bd2ee119b228cc8 67 Pfam PF11273 Protein of unknown function (DUF3073) 2 65 7.8E-26 T 10-03-2017 IPR021426 Protein of unknown function DUF3073 CpPa04_RS04890 7c0a9abe4675a94f37646087f73ec5fe 405 Gene3D G3DSA:1.25.40.10 209 308 7.0E-5 T 10-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CpPa04_RS04890 7c0a9abe4675a94f37646087f73ec5fe 405 SUPERFAMILY SSF48452 209 390 1.57E-5 T 10-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CpPa04_RS00170 f57f7b8534231bcab9ac40b049b32056 486 Gene3D G3DSA:3.90.1310.10 74 144 8.8E-7 T 10-03-2017 CpPa04_RS00170 f57f7b8534231bcab9ac40b049b32056 486 Gene3D G3DSA:3.40.710.10 145 479 1.4E-79 T 10-03-2017 IPR012338 Beta-lactamase/transpeptidase-like CpPa04_RS00170 f57f7b8534231bcab9ac40b049b32056 486 Pfam PF00905 Penicillin binding protein transpeptidase domain 157 475 3.3E-62 T 10-03-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CpPa04_RS00170 f57f7b8534231bcab9ac40b049b32056 486 SUPERFAMILY SSF56601 95 480 5.98E-75 T 10-03-2017 IPR012338 Beta-lactamase/transpeptidase-like CpPa04_RS01540 c254875943f53251acce2459f8efafbf 320 Gene3D G3DSA:3.90.110.10 154 318 5.2E-47 T 10-03-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CpPa04_RS01540 c254875943f53251acce2459f8efafbf 320 SUPERFAMILY SSF56327 152 315 7.64E-45 T 10-03-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CpPa04_RS01540 c254875943f53251acce2459f8efafbf 320 SUPERFAMILY SSF51735 2 153 4.95E-30 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS01540 c254875943f53251acce2459f8efafbf 320 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 154 316 1.4E-15 T 10-03-2017 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 CpPa04_RS01540 c254875943f53251acce2459f8efafbf 320 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 151 1.1E-19 T 10-03-2017 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 CpPa04_RS01540 c254875943f53251acce2459f8efafbf 320 PIRSF PIRSF000102 1 320 5.9E-85 T 10-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CpPa04_RS01540 c254875943f53251acce2459f8efafbf 320 Gene3D G3DSA:3.40.50.720 5 153 3.7E-33 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS01540 c254875943f53251acce2459f8efafbf 320 PRINTS PR00086 L-lactate dehydrogenase signature 179 192 1.3E-22 T 10-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CpPa04_RS01540 c254875943f53251acce2459f8efafbf 320 PRINTS PR00086 L-lactate dehydrogenase signature 5 29 1.3E-22 T 10-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CpPa04_RS01540 c254875943f53251acce2459f8efafbf 320 PRINTS PR00086 L-lactate dehydrogenase signature 30 54 1.3E-22 T 10-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CpPa04_RS01540 c254875943f53251acce2459f8efafbf 320 PRINTS PR00086 L-lactate dehydrogenase signature 125 145 1.3E-22 T 10-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CpPa04_RS01540 c254875943f53251acce2459f8efafbf 320 PRINTS PR00086 L-lactate dehydrogenase signature 149 167 1.3E-22 T 10-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CpPa04_RS08715 440e1d20f04ab4a891cfb7ab22533449 257 SMART SM00382 28 237 1.6E-8 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS08715 440e1d20f04ab4a891cfb7ab22533449 257 Gene3D G3DSA:3.40.50.300 3 249 3.3E-65 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS08715 440e1d20f04ab4a891cfb7ab22533449 257 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS08715 440e1d20f04ab4a891cfb7ab22533449 257 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 4 257 2.1E-115 T 10-03-2017 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 CpPa04_RS08715 440e1d20f04ab4a891cfb7ab22533449 257 Pfam PF00005 ABC transporter 20 175 6.1E-30 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS08715 440e1d20f04ab4a891cfb7ab22533449 257 SUPERFAMILY SSF52540 4 244 3.69E-57 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09970 34b0fa8400f9bf9cab53cea7bbd30198 451 Pfam PF17173 Domain of unknown function (DUF5129) 74 290 4.7E-16 T 10-03-2017 IPR033435 Domain of unknown function DUF5129 CpPa04_RS04500 9e9be6e8f239c094707148889dcb2484 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 10-03-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CpPa04_RS04500 9e9be6e8f239c094707148889dcb2484 613 SUPERFAMILY SSF52016 423 611 6.04E-58 T 10-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CpPa04_RS04500 9e9be6e8f239c094707148889dcb2484 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 611 44.536 T 10-03-2017 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CpPa04_RS04500 9e9be6e8f239c094707148889dcb2484 613 Pfam PF00920 Dehydratase family 34 608 2.7E-213 T 10-03-2017 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CpPa04_RS04500 9e9be6e8f239c094707148889dcb2484 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 511 522 - T 10-03-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CpPa04_RS04500 9e9be6e8f239c094707148889dcb2484 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 611 6.4E-239 T 10-03-2017 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CpPa04_RS04500 9e9be6e8f239c094707148889dcb2484 613 SUPERFAMILY SSF143975 3 422 3.79E-131 T 10-03-2017 CpPa04_RS08575 5e1fe15f35594811d547503e6b53df8f 110 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 8 106 3.7E-16 T 10-03-2017 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CpPa04_RS00985 bed62c53baf30b85cb9f4d6f8361f1f4 996 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 60 118 2.5E-8 T 10-03-2017 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CpPa04_RS00985 bed62c53baf30b85cb9f4d6f8361f1f4 996 Pfam PF00361 Proton-conducting membrane transporter 131 406 3.4E-61 T 10-03-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CpPa04_RS00985 bed62c53baf30b85cb9f4d6f8361f1f4 996 Pfam PF13244 Domain of unknown function (DUF4040) 616 679 1.4E-17 T 10-03-2017 IPR025383 Domain of unknown function DUF4040 CpPa04_RS00985 bed62c53baf30b85cb9f4d6f8361f1f4 996 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 80 105 9.2E-31 T 10-03-2017 CpPa04_RS00985 bed62c53baf30b85cb9f4d6f8361f1f4 996 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 108 128 9.2E-31 T 10-03-2017 CpPa04_RS00985 bed62c53baf30b85cb9f4d6f8361f1f4 996 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 220 241 9.2E-31 T 10-03-2017 CpPa04_RS00985 bed62c53baf30b85cb9f4d6f8361f1f4 996 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 310 322 9.2E-31 T 10-03-2017 CpPa04_RS00985 bed62c53baf30b85cb9f4d6f8361f1f4 996 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 419 438 9.2E-31 T 10-03-2017 CpPa04_RS00985 bed62c53baf30b85cb9f4d6f8361f1f4 996 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 242 268 9.2E-31 T 10-03-2017 CpPa04_RS00985 bed62c53baf30b85cb9f4d6f8361f1f4 996 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 795 910 2.8E-29 T 10-03-2017 IPR007182 Na+/H+ antiporter MnhB subunit-related protein CpPa04_RS07685 76a0f15a775fddaf3dc5928dc5a5cf9f 690 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 62 173 8.7E-11 T 10-03-2017 IPR007621 TPM domain CpPa04_RS08750 53f7d84b25de73c1e424ab7e6e87714e 214 Hamap MF_01297 UPF0678 fatty acid-binding protein-like protein . 51 213 30.155 T 10-03-2017 IPR022939 Uncharacterised protein family UPF0678 CpPa04_RS08750 53f7d84b25de73c1e424ab7e6e87714e 214 SUPERFAMILY SSF50814 54 212 8.12E-37 T 10-03-2017 IPR011038 Calycin-like CpPa04_RS08750 53f7d84b25de73c1e424ab7e6e87714e 214 Pfam PF08768 Domain of unknown function (DUF1794) 59 211 1.6E-41 T 10-03-2017 IPR014878 Domain of unknown function DUF1794 CpPa04_RS05530 782c35493dd5bc119ebf525e02c3fef3 159 SUPERFAMILY SSF117916 60 153 6.54E-26 T 10-03-2017 CpPa04_RS05530 782c35493dd5bc119ebf525e02c3fef3 159 Pfam PF01883 Domain of unknown function DUF59 61 121 6.5E-17 T 10-03-2017 IPR002744 Domain of unknown function DUF59 CpPa04_RS10465 e5c26da057b5692f43c9a19fd064ba78 311 Pfam PF00480 ROK family 14 301 4.8E-42 T 10-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CpPa04_RS10465 e5c26da057b5692f43c9a19fd064ba78 311 SUPERFAMILY SSF53067 13 301 4.34E-50 T 10-03-2017 CpPa04_RS10465 e5c26da057b5692f43c9a19fd064ba78 311 Gene3D G3DSA:3.30.420.40 145 284 3.1E-26 T 10-03-2017 CpPa04_RS10465 e5c26da057b5692f43c9a19fd064ba78 311 Gene3D G3DSA:3.30.420.40 12 144 6.1E-37 T 10-03-2017 CpPa04_RS08050 1cf38ff35b54c95adb69bd274082de7c 136 Pfam PF00334 Nucleoside diphosphate kinase 3 135 2.8E-52 T 10-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CpPa04_RS08050 1cf38ff35b54c95adb69bd274082de7c 136 Gene3D G3DSA:3.30.70.141 2 135 9.0E-56 T 10-03-2017 CpPa04_RS08050 1cf38ff35b54c95adb69bd274082de7c 136 SUPERFAMILY SSF54919 2 135 1.7E-53 T 10-03-2017 CpPa04_RS08050 1cf38ff35b54c95adb69bd274082de7c 136 PRINTS PR01243 Nucleoside diphosphate kinase signature 69 86 1.8E-42 T 10-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CpPa04_RS08050 1cf38ff35b54c95adb69bd274082de7c 136 PRINTS PR01243 Nucleoside diphosphate kinase signature 49 68 1.8E-42 T 10-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CpPa04_RS08050 1cf38ff35b54c95adb69bd274082de7c 136 PRINTS PR01243 Nucleoside diphosphate kinase signature 5 27 1.8E-42 T 10-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CpPa04_RS08050 1cf38ff35b54c95adb69bd274082de7c 136 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.8E-42 T 10-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CpPa04_RS08050 1cf38ff35b54c95adb69bd274082de7c 136 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.8E-42 T 10-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CpPa04_RS08050 1cf38ff35b54c95adb69bd274082de7c 136 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 2 136 33.725 T 10-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CpPa04_RS08050 1cf38ff35b54c95adb69bd274082de7c 136 SMART SM00562 2 136 6.5E-73 T 10-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CpPa04_RS08050 1cf38ff35b54c95adb69bd274082de7c 136 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 10-03-2017 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CpPa04_RS09855 96fa9529ce2dfcee957af6288f35479d 396 Pfam PF11271 Protein of unknown function (DUF3068) 31 382 5.8E-79 T 10-03-2017 IPR021424 Protein of unknown function DUF3068 CpPa04_RS00990 3275fca7789868603101f4e8c7fb91fb 477 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 104 131 4.8E-5 T 10-03-2017 IPR023908 xxxLxxG heptad repeat CpPa04_RS00990 3275fca7789868603101f4e8c7fb91fb 477 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 77 103 4.1E-5 T 10-03-2017 IPR023908 xxxLxxG heptad repeat CpPa04_RS00990 3275fca7789868603101f4e8c7fb91fb 477 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 90 116 6.2E-5 T 10-03-2017 IPR023908 xxxLxxG heptad repeat CpPa04_RS03295 7de59876a5a392c5b46a5607436e908c 293 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 66 79 - T 10-03-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CpPa04_RS03295 7de59876a5a392c5b46a5607436e908c 293 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 275 3.6E-46 T 10-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CpPa04_RS03295 7de59876a5a392c5b46a5607436e908c 293 Gene3D G3DSA:3.40.190.10 137 224 6.9E-20 T 10-03-2017 CpPa04_RS03295 7de59876a5a392c5b46a5607436e908c 293 Gene3D G3DSA:3.40.190.10 40 136 5.2E-26 T 10-03-2017 CpPa04_RS03295 7de59876a5a392c5b46a5607436e908c 293 Gene3D G3DSA:3.40.190.10 236 275 5.2E-26 T 10-03-2017 CpPa04_RS03295 7de59876a5a392c5b46a5607436e908c 293 SUPERFAMILY SSF53850 9 275 7.77E-51 T 10-03-2017 CpPa04_RS03295 7de59876a5a392c5b46a5607436e908c 293 SMART SM00062 43 277 2.3E-66 T 10-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CpPa04_RS03045 eb73bb6c068184a4d8de1e46beaaa58c 313 Pfam PF05096 Glutamine cyclotransferase 57 307 8.3E-75 T 10-03-2017 IPR007788 Glutamine cyclotransferase CpPa04_RS03045 eb73bb6c068184a4d8de1e46beaaa58c 313 SUPERFAMILY SSF50969 90 305 6.28E-7 T 10-03-2017 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CpPa04_RS03210 2e43bdecc6863132993d0b49928d38d5 175 Pfam PF00186 Dihydrofolate reductase 1 142 1.5E-37 T 10-03-2017 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CpPa04_RS03210 2e43bdecc6863132993d0b49928d38d5 175 PRINTS PR00070 Dihydrofolate reductase signature 13 23 1.9E-15 T 10-03-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CpPa04_RS03210 2e43bdecc6863132993d0b49928d38d5 175 PRINTS PR00070 Dihydrofolate reductase signature 40 51 1.9E-15 T 10-03-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CpPa04_RS03210 2e43bdecc6863132993d0b49928d38d5 175 PRINTS PR00070 Dihydrofolate reductase signature 27 35 1.9E-15 T 10-03-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CpPa04_RS03210 2e43bdecc6863132993d0b49928d38d5 175 PRINTS PR00070 Dihydrofolate reductase signature 88 102 1.9E-15 T 10-03-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CpPa04_RS03210 2e43bdecc6863132993d0b49928d38d5 175 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 13 35 - T 10-03-2017 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-113510|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-69205 CpPa04_RS03210 2e43bdecc6863132993d0b49928d38d5 175 SUPERFAMILY SSF53597 1 173 1.05E-43 T 10-03-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CpPa04_RS03210 2e43bdecc6863132993d0b49928d38d5 175 Gene3D G3DSA:3.40.430.10 1 173 4.2E-44 T 10-03-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CpPa04_RS05880 1425b2898d9fd3dcf89ec94474aa9ade 178 Gene3D G3DSA:3.40.50.360 2 175 1.2E-26 T 10-03-2017 IPR029039 Flavoprotein-like domain CpPa04_RS05880 1425b2898d9fd3dcf89ec94474aa9ade 178 SUPERFAMILY SSF52218 2 168 1.83E-21 T 10-03-2017 IPR029039 Flavoprotein-like domain CpPa04_RS05880 1425b2898d9fd3dcf89ec94474aa9ade 178 Pfam PF03358 NADPH-dependent FMN reductase 3 150 2.4E-26 T 10-03-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CpPa04_RS05880 1425b2898d9fd3dcf89ec94474aa9ade 178 TIGRFAM TIGR04037 LLM_duo_CE1759: LLM-partnered FMN reductase, CE1759 family 5 176 8.8E-68 T 10-03-2017 IPR023932 Uncharacterised protein family, CE1759 CpPa04_RS09885 5c6f9796810cdba815e89eb94f7ec4dd 219 Gene3D G3DSA:3.40.50.1010 45 183 4.6E-7 T 10-03-2017 IPR029060 PIN domain-like CpPa04_RS09885 5c6f9796810cdba815e89eb94f7ec4dd 219 Pfam PF01936 NYN domain 22 180 8.4E-8 T 10-03-2017 IPR021139 NYN domain, limkain-b1-type CpPa04_RS08120 b19b81f6fddbae6954b983d612346db0 80 Gene3D G3DSA:1.10.10.10 16 70 9.3E-5 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS05965 725af0b1a046eba0faf08e9ee3222f0a 203 Pfam PF14520 Helix-hairpin-helix domain 71 129 8.6E-16 T 10-03-2017 CpPa04_RS05965 725af0b1a046eba0faf08e9ee3222f0a 203 Gene3D G3DSA:2.40.50.140 1 64 1.9E-24 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS05965 725af0b1a046eba0faf08e9ee3222f0a 203 SUPERFAMILY SSF46929 153 202 7.72E-9 T 10-03-2017 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CpPa04_RS05965 725af0b1a046eba0faf08e9ee3222f0a 203 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 200 28.354 T 10-03-2017 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CpPa04_RS05965 725af0b1a046eba0faf08e9ee3222f0a 203 SUPERFAMILY SSF50249 1 62 5.65E-16 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS05965 725af0b1a046eba0faf08e9ee3222f0a 203 Pfam PF07499 RuvA, C-terminal domain 153 199 6.1E-13 T 10-03-2017 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CpPa04_RS05965 725af0b1a046eba0faf08e9ee3222f0a 203 Gene3D G3DSA:1.10.8.10 145 203 5.7E-22 T 10-03-2017 CpPa04_RS05965 725af0b1a046eba0faf08e9ee3222f0a 203 Gene3D G3DSA:1.10.150.20 67 137 3.7E-27 T 10-03-2017 CpPa04_RS05965 725af0b1a046eba0faf08e9ee3222f0a 203 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 197 2.7E-39 T 10-03-2017 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CpPa04_RS05965 725af0b1a046eba0faf08e9ee3222f0a 203 Pfam PF01330 RuvA N terminal domain 1 61 3.2E-20 T 10-03-2017 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 CpPa04_RS05965 725af0b1a046eba0faf08e9ee3222f0a 203 SUPERFAMILY SSF47781 65 133 5.0E-20 T 10-03-2017 IPR010994 RuvA domain 2-like CpPa04_RS10360 e8d59f0f35db9a9091e2194051d4163c 325 SUPERFAMILY SSF52402 22 166 6.28E-13 T 10-03-2017 CpPa04_RS10360 e8d59f0f35db9a9091e2194051d4163c 325 Gene3D G3DSA:3.40.50.620 22 167 1.5E-13 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS10360 e8d59f0f35db9a9091e2194051d4163c 325 Gene3D G3DSA:3.40.50.620 177 318 5.4E-18 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS10360 e8d59f0f35db9a9091e2194051d4163c 325 SUPERFAMILY SSF52402 180 318 2.93E-18 T 10-03-2017 CpPa04_RS10360 e8d59f0f35db9a9091e2194051d4163c 325 Pfam PF00582 Universal stress protein family 177 318 4.8E-12 T 10-03-2017 IPR006016 UspA GO:0006950 CpPa04_RS10360 e8d59f0f35db9a9091e2194051d4163c 325 Pfam PF00582 Universal stress protein family 22 164 2.7E-10 T 10-03-2017 IPR006016 UspA GO:0006950 CpPa04_RS03245 a90e4a0cb9838af89373db0ffe6f329b 137 PIRSF PIRSF028777 1 130 3.4E-49 T 10-03-2017 IPR031308 Uncharacterised conserved protein UCP028777 CpPa04_RS03245 a90e4a0cb9838af89373db0ffe6f329b 137 Pfam PF03733 Inner membrane component domain 4 54 5.5E-18 T 10-03-2017 IPR005185 Inner membrane component domain CpPa04_RS03245 a90e4a0cb9838af89373db0ffe6f329b 137 Pfam PF03733 Inner membrane component domain 69 119 7.5E-15 T 10-03-2017 IPR005185 Inner membrane component domain CpPa04_RS00685 8aeb7077fd61bf79dee7755a55b0c471 337 SUPERFAMILY SSF48179 186 271 3.74E-20 T 10-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CpPa04_RS00685 8aeb7077fd61bf79dee7755a55b0c471 337 Gene3D G3DSA:3.40.50.720 5 189 2.1E-26 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS00685 8aeb7077fd61bf79dee7755a55b0c471 337 Pfam PF02153 Prephenate dehydrogenase 24 270 4.1E-39 T 10-03-2017 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 CpPa04_RS00685 8aeb7077fd61bf79dee7755a55b0c471 337 SUPERFAMILY SSF51735 10 165 4.79E-28 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS01575 989535e8104b21bad151addcc4f45bc6 108 Hamap MF_00422 Protein translocase subunit SecE [secE]. 49 104 11.171 T 10-03-2017 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CpPa04_RS01575 989535e8104b21bad151addcc4f45bc6 108 Gene3D G3DSA:1.20.5.1030 49 106 3.9E-20 T 10-03-2017 CpPa04_RS01575 989535e8104b21bad151addcc4f45bc6 108 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 52 105 9.6E-18 T 10-03-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CpPa04_RS01575 989535e8104b21bad151addcc4f45bc6 108 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 53 103 3.0E-17 T 10-03-2017 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CpPa04_RS05165 8eeb1448066cd15af2cb9b2c8d5a2fe5 230 Gene3D G3DSA:2.40.128.110 65 229 1.9E-29 T 10-03-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CpPa04_RS05165 8eeb1448066cd15af2cb9b2c8d5a2fe5 230 Pfam PF04264 YceI-like domain 76 224 2.2E-23 T 10-03-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CpPa04_RS05165 8eeb1448066cd15af2cb9b2c8d5a2fe5 230 SUPERFAMILY SSF101874 74 229 2.22E-27 T 10-03-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CpPa04_RS05165 8eeb1448066cd15af2cb9b2c8d5a2fe5 230 SMART SM00867 57 228 3.9E-24 T 10-03-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CpPa04_RS04015 ddf91a3aa4c8c36d2a9cbb8c6430ba40 210 SUPERFAMILY SSF53335 33 210 4.89E-13 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS04015 ddf91a3aa4c8c36d2a9cbb8c6430ba40 210 Pfam PF01596 O-methyltransferase 43 209 3.6E-8 T 10-03-2017 IPR002935 O-methyltransferase, family 3 GO:0008171 CpPa04_RS04015 ddf91a3aa4c8c36d2a9cbb8c6430ba40 210 Gene3D G3DSA:3.40.50.150 5 210 2.3E-31 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS06420 7b9773d9c3f20314dca57b3c6500e7cf 220 TIGRFAM TIGR03085 TIGR03085: TIGR03085 family protein 9 215 6.0E-55 T 10-03-2017 IPR017519 Conserved hypothetical protein CHP03085 CpPa04_RS06420 7b9773d9c3f20314dca57b3c6500e7cf 220 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 8 201 2.6E-19 T 10-03-2017 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type CpPa04_RS07160 cac3720a8f04320c561281ab3c63513e 490 TIGRFAM TIGR03459 crt_membr: carotene biosynthesis associated membrane protein 14 473 4.3E-194 T 10-03-2017 IPR017822 Carotene biosynthesis-associated membrane protein, type-1 CpPa04_RS05095 ef729bde41eaf63c3ba351bd13bb6227 476 Gene3D G3DSA:3.40.50.410 289 472 2.3E-8 T 10-03-2017 IPR002035 von Willebrand factor, type A CpPa04_RS05095 ef729bde41eaf63c3ba351bd13bb6227 476 SUPERFAMILY SSF53300 289 472 4.79E-12 T 10-03-2017 IPR002035 von Willebrand factor, type A CpPa04_RS05095 ef729bde41eaf63c3ba351bd13bb6227 476 SMART SM00327 292 474 8.2E-6 T 10-03-2017 IPR002035 von Willebrand factor, type A CpPa04_RS05220 da63fff85b33784b31aa50c809b9f577 257 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 3 243 1.1E-89 T 10-03-2017 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 CpPa04_RS05220 da63fff85b33784b31aa50c809b9f577 257 Gene3D G3DSA:3.40.1010.10 2 110 6.2E-34 T 10-03-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS05220 da63fff85b33784b31aa50c809b9f577 257 Gene3D G3DSA:3.30.950.10 111 232 2.2E-38 T 10-03-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS05220 da63fff85b33784b31aa50c809b9f577 257 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 6 20 - T 10-03-2017 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CpPa04_RS05220 da63fff85b33784b31aa50c809b9f577 257 SUPERFAMILY SSF53790 2 231 3.27E-65 T 10-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS05220 da63fff85b33784b31aa50c809b9f577 257 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 2 208 3.7E-43 T 10-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CpPa04_RS06865 8f8882e999de02d8ddb630c5d0398077 269 SUPERFAMILY SSF51366 13 258 3.38E-64 T 10-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CpPa04_RS06865 8f8882e999de02d8ddb630c5d0398077 269 Pfam PF00218 Indole-3-glycerol phosphate synthase 6 256 2.0E-60 T 10-03-2017 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CpPa04_RS06865 8f8882e999de02d8ddb630c5d0398077 269 Gene3D G3DSA:3.20.20.70 1 262 2.0E-77 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS01315 fdd5fe5c299f36b2e8106485c3d416ee 420 Hamap MF_01695 D-inositol-3-phosphate glycosyltransferase [mshA]. 1 410 45.822 T 10-03-2017 IPR017814 Mycothiol biosynthesis protein, MshA GO:0008375|GO:0010125 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 CpPa04_RS01315 fdd5fe5c299f36b2e8106485c3d416ee 420 Gene3D G3DSA:3.40.50.2000 181 382 3.5E-42 T 10-03-2017 CpPa04_RS01315 fdd5fe5c299f36b2e8106485c3d416ee 420 Pfam PF13439 Glycosyltransferase Family 4 21 200 3.7E-31 T 10-03-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CpPa04_RS01315 fdd5fe5c299f36b2e8106485c3d416ee 420 TIGRFAM TIGR03449 mycothiol_MshA: D-inositol-3-phosphate glycosyltransferase 2 406 3.1E-202 T 10-03-2017 IPR017814 Mycothiol biosynthesis protein, MshA GO:0008375|GO:0010125 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 CpPa04_RS01315 fdd5fe5c299f36b2e8106485c3d416ee 420 Pfam PF00534 Glycosyl transferases group 1 218 382 7.9E-36 T 10-03-2017 IPR001296 Glycosyl transferase, family 1 CpPa04_RS01315 fdd5fe5c299f36b2e8106485c3d416ee 420 SUPERFAMILY SSF53756 20 406 1.32E-87 T 10-03-2017 CpPa04_RS01870 16f2965f0ddd2fde59b7fc143eb98959 458 Pfam PF03313 Serine dehydratase alpha chain 186 447 2.0E-94 T 10-03-2017 IPR005130 Serine dehydratase-like, alpha subunit CpPa04_RS01870 16f2965f0ddd2fde59b7fc143eb98959 458 Gene3D G3DSA:3.30.1330.90 11 158 4.0E-52 T 10-03-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CpPa04_RS01870 16f2965f0ddd2fde59b7fc143eb98959 458 Pfam PF03315 Serine dehydratase beta chain 4 156 3.7E-55 T 10-03-2017 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CpPa04_RS01870 16f2965f0ddd2fde59b7fc143eb98959 458 SUPERFAMILY SSF143548 17 159 8.37E-43 T 10-03-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CpPa04_RS01870 16f2965f0ddd2fde59b7fc143eb98959 458 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 449 1.5E-204 T 10-03-2017 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CpPa04_RS09395 5939d9faed930dd9c7a7b13ecf72d3d2 466 Pfam PF05140 ResB-like family 28 446 1.6E-61 T 10-03-2017 IPR007816 ResB-like domain CpPa04_RS04100 5637d8b8dac98d9dd89f6d4d3ca2c73b 552 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 41 447 6.8E-72 T 10-03-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CpPa04_RS04100 5637d8b8dac98d9dd89f6d4d3ca2c73b 552 Pfam PF00474 Sodium:solute symporter family 41 447 1.4E-45 T 10-03-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CpPa04_RS02795 ccd9490fc8ad5c1833e2b0d93d6dcea3 988 Hamap MF_01600 UPF0182 protein . 14 907 17.331 T 10-03-2017 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 CpPa04_RS02795 ccd9490fc8ad5c1833e2b0d93d6dcea3 988 Pfam PF03699 Uncharacterised protein family (UPF0182) 22 830 4.1E-275 T 10-03-2017 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 CpPa04_RS04970 20fd11a73b5e74f7f14ee1a007509bc7 286 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 148 162 - T 10-03-2017 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CpPa04_RS04970 20fd11a73b5e74f7f14ee1a007509bc7 286 Pfam PF00849 RNA pseudouridylate synthase 107 242 9.2E-23 T 10-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CpPa04_RS04970 20fd11a73b5e74f7f14ee1a007509bc7 286 SUPERFAMILY SSF55174 42 111 1.14E-13 T 10-03-2017 CpPa04_RS04970 20fd11a73b5e74f7f14ee1a007509bc7 286 SMART SM00363 46 105 6.2E-7 T 10-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 CpPa04_RS04970 20fd11a73b5e74f7f14ee1a007509bc7 286 Pfam PF01479 S4 domain 47 91 3.5E-11 T 10-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 CpPa04_RS04970 20fd11a73b5e74f7f14ee1a007509bc7 286 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 112 273 2.2E-42 T 10-03-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CpPa04_RS04970 20fd11a73b5e74f7f14ee1a007509bc7 286 SUPERFAMILY SSF55120 102 284 1.21E-42 T 10-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CpPa04_RS04970 20fd11a73b5e74f7f14ee1a007509bc7 286 Gene3D G3DSA:3.10.290.10 44 108 4.6E-22 T 10-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 CpPa04_RS04645 f88125da0f448dc8d0d5ff349877c24f 363 Gene3D G3DSA:3.30.470.20 139 165 1.0E-43 T 10-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CpPa04_RS04645 f88125da0f448dc8d0d5ff349877c24f 363 Gene3D G3DSA:3.30.470.20 232 362 1.0E-43 T 10-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CpPa04_RS04645 f88125da0f448dc8d0d5ff349877c24f 363 SUPERFAMILY SSF52440 13 148 6.91E-37 T 10-03-2017 IPR016185 Pre-ATP-grasp domain CpPa04_RS04645 f88125da0f448dc8d0d5ff349877c24f 363 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 116 127 - T 10-03-2017 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS04645 f88125da0f448dc8d0d5ff349877c24f 363 Pfam PF07478 D-ala D-ala ligase C-terminus 157 358 8.3E-56 T 10-03-2017 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS04645 f88125da0f448dc8d0d5ff349877c24f 363 Gene3D G3DSA:3.40.50.20 13 138 6.2E-36 T 10-03-2017 IPR016185 Pre-ATP-grasp domain CpPa04_RS04645 f88125da0f448dc8d0d5ff349877c24f 363 Pfam PF01820 D-ala D-ala ligase N-terminus 15 138 3.8E-33 T 10-03-2017 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS04645 f88125da0f448dc8d0d5ff349877c24f 363 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 304 331 - T 10-03-2017 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS04645 f88125da0f448dc8d0d5ff349877c24f 363 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 14 361 38.712 T 10-03-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS04645 f88125da0f448dc8d0d5ff349877c24f 363 PIRSF PIRSF039102 11 363 2.2E-104 T 10-03-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS04645 f88125da0f448dc8d0d5ff349877c24f 363 SUPERFAMILY SSF56059 149 361 9.19E-50 T 10-03-2017 CpPa04_RS04645 f88125da0f448dc8d0d5ff349877c24f 363 Gene3D G3DSA:3.30.1490.20 171 227 1.9E-20 T 10-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CpPa04_RS04645 f88125da0f448dc8d0d5ff349877c24f 363 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 15 360 2.1E-99 T 10-03-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CpPa04_RS07955 4c7f52db51ea75bffbce9960dc7c7f03 215 Pfam PF01810 LysE type translocator 15 208 4.8E-26 T 10-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 CpPa04_RS01300 03df1c30c9b83869e6797dbf999fc9ae 167 Gene3D G3DSA:3.30.530.20 4 147 5.2E-4 T 10-03-2017 IPR023393 START-like domain CpPa04_RS01300 03df1c30c9b83869e6797dbf999fc9ae 167 SUPERFAMILY SSF55961 1 154 9.98E-7 T 10-03-2017 CpPa04_RS01300 03df1c30c9b83869e6797dbf999fc9ae 167 Pfam PF10698 Protein of unknown function (DUF2505) 7 163 7.9E-44 T 10-03-2017 IPR019639 Protein of unknown function DUF2505 CpPa04_RS03090 26a8713b426c3a5cdf0a5208c8dcb38f 501 Pfam PF01039 Carboxyl transferase domain 37 469 1.1E-51 T 10-03-2017 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CpPa04_RS03090 26a8713b426c3a5cdf0a5208c8dcb38f 501 SUPERFAMILY SSF52096 3 218 1.47E-52 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS03090 26a8713b426c3a5cdf0a5208c8dcb38f 501 SUPERFAMILY SSF52096 237 493 3.98E-47 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS03090 26a8713b426c3a5cdf0a5208c8dcb38f 501 Gene3D G3DSA:3.90.226.10 244 455 2.8E-35 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS03090 26a8713b426c3a5cdf0a5208c8dcb38f 501 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 71 85 2.3E-20 T 10-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 CpPa04_RS03090 26a8713b426c3a5cdf0a5208c8dcb38f 501 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 105 123 2.3E-20 T 10-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 CpPa04_RS03090 26a8713b426c3a5cdf0a5208c8dcb38f 501 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 171 182 2.3E-20 T 10-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 CpPa04_RS03090 26a8713b426c3a5cdf0a5208c8dcb38f 501 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 142 159 2.3E-20 T 10-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 CpPa04_RS03090 26a8713b426c3a5cdf0a5208c8dcb38f 501 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 193 202 2.3E-20 T 10-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 CpPa04_RS03090 26a8713b426c3a5cdf0a5208c8dcb38f 501 Gene3D G3DSA:3.90.226.10 3 221 1.3E-46 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS07455 7d9c2d39f2d4045a0c7318c7dc3e99a5 299 Pfam PF04213 Htaa 40 203 4.4E-24 T 10-03-2017 IPR007331 Htaa CpPa04_RS06435 ff52314014146db3edcfbda4b9a639c6 252 Pfam PF02511 Thymidylate synthase complementing protein 31 226 8.4E-49 T 10-03-2017 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 CpPa04_RS06435 ff52314014146db3edcfbda4b9a639c6 252 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 10 232 1.5E-51 T 10-03-2017 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 CpPa04_RS06435 ff52314014146db3edcfbda4b9a639c6 252 Hamap MF_01408 Thymidylate synthase ThyX [thyX]. 7 240 26.702 T 10-03-2017 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 CpPa04_RS06435 ff52314014146db3edcfbda4b9a639c6 252 SUPERFAMILY SSF69796 30 239 6.8E-58 T 10-03-2017 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 CpPa04_RS03745 90a32e3e472d4fa0ea36746db52f9e8e 216 Gene3D G3DSA:1.10.357.10 9 61 1.8E-11 T 10-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CpPa04_RS03745 90a32e3e472d4fa0ea36746db52f9e8e 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 61 4.0E-5 T 10-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CpPa04_RS03745 90a32e3e472d4fa0ea36746db52f9e8e 216 SUPERFAMILY SSF46689 12 61 2.74E-9 T 10-03-2017 IPR009057 Homeodomain-like GO:0003677 CpPa04_RS03745 90a32e3e472d4fa0ea36746db52f9e8e 216 Gene3D G3DSA:1.10.357.10 74 205 1.3E-4 T 10-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CpPa04_RS07355 90a027a23ea2ec39428878430078e825 130 Pfam PF10991 Protein of unknown function (DUF2815) 9 114 4.5E-27 T 10-03-2017 IPR022595 Protein of unknown function DUF2815 CpPa04_RS07355 90a027a23ea2ec39428878430078e825 130 SUPERFAMILY SSF50249 5 113 6.34E-24 T 10-03-2017 IPR012340 Nucleic acid-binding, OB-fold CpPa04_RS01650 f563624b26a36b0a3421e130073383c6 313 Pfam PF11271 Protein of unknown function (DUF3068) 9 305 1.6E-79 T 10-03-2017 IPR021424 Protein of unknown function DUF3068 CpPa04_RS09505 8b0bca02e2accea877999f8d1f9a0079 796 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 369 400 8.3E-5 T 10-03-2017 IPR001434 Domain of unknown function DUF11 CpPa04_RS09505 8b0bca02e2accea877999f8d1f9a0079 796 SUPERFAMILY SSF82171 89 266 4.32E-5 T 10-03-2017 CpPa04_RS09505 8b0bca02e2accea877999f8d1f9a0079 796 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 760 790 3.2E-4 T 10-03-2017 IPR019931 LPXTG cell wall anchor domain CpPa04_RS07610 2073c43d09784e7251971e64e059803c 101 Gene3D G3DSA:1.10.1200.10 36 97 1.6E-14 T 10-03-2017 IPR009081 Phosphopantetheine binding ACP domain CpPa04_RS07610 2073c43d09784e7251971e64e059803c 101 Pfam PF00550 Phosphopantetheine attachment site 35 93 3.7E-12 T 10-03-2017 IPR009081 Phosphopantetheine binding ACP domain CpPa04_RS07610 2073c43d09784e7251971e64e059803c 101 SUPERFAMILY SSF47336 35 97 2.75E-13 T 10-03-2017 IPR009081 Phosphopantetheine binding ACP domain CpPa04_RS06035 a8b52665ec23a5b8b7b2294b4dfff882 201 SUPERFAMILY SSF110087 42 174 1.31E-29 T 10-03-2017 IPR007410 DR1885-like metal-binding protein CpPa04_RS06035 a8b52665ec23a5b8b7b2294b4dfff882 201 Pfam PF04314 Protein of unknown function (DUF461) 63 167 1.1E-28 T 10-03-2017 IPR007410 DR1885-like metal-binding protein CpPa04_RS07860 92a4bcdf379e90541cc704a16a2e23e5 306 Pfam PF03547 Membrane transport protein 10 155 1.5E-8 T 10-03-2017 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CpPa04_RS07860 92a4bcdf379e90541cc704a16a2e23e5 306 Pfam PF03547 Membrane transport protein 163 301 1.3E-11 T 10-03-2017 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CpPa04_RS02970 3cdf266094235cda1a4b089cb78ceb24 321 Pfam PF01032 FecCD transport family 21 316 1.0E-62 T 10-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CpPa04_RS02970 3cdf266094235cda1a4b089cb78ceb24 321 SUPERFAMILY SSF81345 9 316 1.57E-65 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS02970 3cdf266094235cda1a4b089cb78ceb24 321 Gene3D G3DSA:1.10.3470.10 6 317 2.0E-67 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS05080 6d5f0c8fdbc078aeb9b303d78400d935 250 Pfam PF00376 MerR family regulatory protein 28 69 3.4E-14 T 10-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CpPa04_RS05080 6d5f0c8fdbc078aeb9b303d78400d935 250 SUPERFAMILY SSF46955 38 108 1.21E-14 T 10-03-2017 IPR009061 Putative DNA-binding domain CpPa04_RS05080 6d5f0c8fdbc078aeb9b303d78400d935 250 SMART SM00422 27 101 2.9E-18 T 10-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CpPa04_RS05080 6d5f0c8fdbc078aeb9b303d78400d935 250 Gene3D G3DSA:1.10.1660.10 28 107 2.7E-18 T 10-03-2017 CpPa04_RS06980 b0a97df41d86d69635148b70384731ec 434 TIGRFAM TIGR02079 THD1: threonine dehydratase 21 432 1.1E-168 T 10-03-2017 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CpPa04_RS06980 b0a97df41d86d69635148b70384731ec 434 Gene3D G3DSA:3.40.50.1100 65 152 1.7E-27 T 10-03-2017 CpPa04_RS06980 b0a97df41d86d69635148b70384731ec 434 Gene3D G3DSA:3.40.50.1100 153 344 1.4E-54 T 10-03-2017 CpPa04_RS06980 b0a97df41d86d69635148b70384731ec 434 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 57 70 - T 10-03-2017 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CpPa04_RS06980 b0a97df41d86d69635148b70384731ec 434 SUPERFAMILY SSF53686 20 376 6.02E-91 T 10-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CpPa04_RS06980 b0a97df41d86d69635148b70384731ec 434 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 31 326 2.8E-72 T 10-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CpPa04_RS06980 b0a97df41d86d69635148b70384731ec 434 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 339 431 7.7E-26 T 10-03-2017 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CpPa04_RS07060 1d3dc59f07c5f346cd1f352ecb43266f 239 SUPERFAMILY SSF64438 8 238 1.34E-74 T 10-03-2017 IPR011324 Cytotoxic necrotizing factor-like, catalytic CpPa04_RS07060 1d3dc59f07c5f346cd1f352ecb43266f 239 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 14 237 6.9E-69 T 10-03-2017 IPR003730 Multi-copper polyphenol oxidoreductase, laccase CpPa04_RS07060 1d3dc59f07c5f346cd1f352ecb43266f 239 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 19 238 4.4E-59 T 10-03-2017 IPR003730 Multi-copper polyphenol oxidoreductase, laccase CpPa04_RS07060 1d3dc59f07c5f346cd1f352ecb43266f 239 Gene3D G3DSA:3.60.140.10 7 238 1.9E-80 T 10-03-2017 IPR003730 Multi-copper polyphenol oxidoreductase, laccase CpPa04_RS09840 094752a6461b604944d3bbd14cd9b631 62 Pfam PF11021 Protein of unknown function (DUF2613) 11 61 3.3E-18 T 10-03-2017 IPR022566 Protein of unknown function DUF2613 CpPa04_RS02525 ca3a309b07debe5e446cfc9f01b68627 278 SUPERFAMILY SSF161098 4 277 1.11E-69 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS02525 ca3a309b07debe5e446cfc9f01b68627 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 271 9.3E-21 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS02525 ca3a309b07debe5e446cfc9f01b68627 278 Gene3D G3DSA:1.10.3720.10 4 265 4.0E-63 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS05410 5726b9fe20ceae3616e6b97b1c16384f 91 SUPERFAMILY SSF52540 7 78 1.47E-18 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05410 5726b9fe20ceae3616e6b97b1c16384f 91 Gene3D G3DSA:3.40.50.300 9 78 7.7E-18 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05410 5726b9fe20ceae3616e6b97b1c16384f 91 Pfam PF00005 ABC transporter 17 46 1.0E-6 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS09345 3825d4cab8e97d76c2c30eeb0295528d 156 Pfam PF13673 Acetyltransferase (GNAT) domain 26 148 1.8E-21 T 10-03-2017 IPR000182 GNAT domain GO:0008080 CpPa04_RS09345 3825d4cab8e97d76c2c30eeb0295528d 156 SUPERFAMILY SSF55729 10 148 2.48E-29 T 10-03-2017 IPR016181 Acyl-CoA N-acyltransferase CpPa04_RS09345 3825d4cab8e97d76c2c30eeb0295528d 156 Gene3D G3DSA:3.40.630.30 10 147 3.1E-36 T 10-03-2017 IPR016181 Acyl-CoA N-acyltransferase CpPa04_RS08560 3eb9b8b31e8406c8f8ff9264b0b66329 153 Pfam PF07291 Methylamine utilisation protein MauE 14 112 4.4E-10 T 10-03-2017 IPR009908 Methylamine utilisation protein, MauE GO:0016021|GO:0030416 CpPa04_RS03320 b4d3b928e9ee0ef2faac00863bbfa24a 298 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 171 293 3.0E-11 T 10-03-2017 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding CpPa04_RS10195 1863e5acf326d70e9102db8ea901f840 190 SUPERFAMILY SSF55724 45 190 1.15E-65 T 10-03-2017 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich Reactome: R-HSA-5576892 CpPa04_RS10195 1863e5acf326d70e9102db8ea901f840 190 Pfam PF09449 Domain of unknown function (DUF2020) 49 190 7.9E-74 T 10-03-2017 IPR018567 Domain of unknown function DUF2020 CpPa04_RS10195 1863e5acf326d70e9102db8ea901f840 190 Gene3D G3DSA:3.40.1000.10 42 190 1.8E-72 T 10-03-2017 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich Reactome: R-HSA-5576892 CpPa04_RS05150 a6bea810334c7a0838b74f4b98ff82f2 461 Pfam PF07690 Major Facilitator Superfamily 70 408 2.1E-26 T 10-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CpPa04_RS05150 a6bea810334c7a0838b74f4b98ff82f2 461 Gene3D G3DSA:1.20.1250.20 260 455 6.3E-17 T 10-03-2017 CpPa04_RS05150 a6bea810334c7a0838b74f4b98ff82f2 461 Gene3D G3DSA:1.20.1250.20 24 242 8.5E-23 T 10-03-2017 CpPa04_RS05150 a6bea810334c7a0838b74f4b98ff82f2 461 SUPERFAMILY SSF103473 15 459 9.55E-67 T 10-03-2017 IPR020846 Major facilitator superfamily domain CpPa04_RS07085 2c10721a9e3cb9c6ea36f59687c5636d 544 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 352 376 - T 10-03-2017 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 CpPa04_RS07085 2c10721a9e3cb9c6ea36f59687c5636d 544 Pfam PF01098 Cell cycle protein 36 394 1.8E-87 T 10-03-2017 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CpPa04_RS07650 f36dc695100696a090b71e7554254c26 193 Gene3D G3DSA:2.60.40.230 73 192 5.3E-24 T 10-03-2017 IPR027273 Neocarzinostatin-like CpPa04_RS07650 f36dc695100696a090b71e7554254c26 193 SUPERFAMILY SSF49319 74 192 2.01E-22 T 10-03-2017 IPR027273 Neocarzinostatin-like CpPa04_RS09830 095af515723f23e2f043b1fcd4febfe2 553 Pfam PF12229 Putative peptidoglycan binding domain 243 315 5.7E-10 T 10-03-2017 IPR022029 Putative peptidoglycan binding domain CpPa04_RS09830 095af515723f23e2f043b1fcd4febfe2 553 Pfam PF04294 VanW like protein 354 479 5.5E-43 T 10-03-2017 IPR007391 Vancomycin resistance VanW CpPa04_RS02490 9a4e72af12ce4347d18dd0620773c0bf 543 Pfam PF01039 Carboxyl transferase domain 45 541 1.2E-183 T 10-03-2017 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CpPa04_RS02490 9a4e72af12ce4347d18dd0620773c0bf 543 SUPERFAMILY SSF52096 289 543 6.81E-82 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS02490 9a4e72af12ce4347d18dd0620773c0bf 543 Gene3D G3DSA:3.90.226.10 290 543 4.6E-93 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS02490 9a4e72af12ce4347d18dd0620773c0bf 543 SUPERFAMILY SSF52096 22 272 1.62E-68 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS02490 9a4e72af12ce4347d18dd0620773c0bf 543 Gene3D G3DSA:3.90.226.10 14 271 4.0E-72 T 10-03-2017 IPR029045 ClpP/crotonase-like domain CpPa04_RS08310 ae2370e2966b008d5f93879094954419 91 Pfam PF12277 Protein of unknown function (DUF3618) 2 47 3.1E-15 T 10-03-2017 IPR022062 Protein of unknown function DUF3618 CpPa04_RS10620 5e859c00fb0f621b6cb5727386bac85e 117 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 17 112 3.4E-15 T 10-03-2017 IPR008407 Branched-chain amino acid transport, AzlD CpPa04_RS10620 5e859c00fb0f621b6cb5727386bac85e 117 PIRSF PIRSF003203 10 117 8.8E-35 T 10-03-2017 IPR008407 Branched-chain amino acid transport, AzlD CpPa04_RS06700 2d8bcf08d4a6fffe8cf7a84a3ac34b51 253 Pfam PF10502 Signal peptidase, peptidase S26 130 230 4.6E-5 T 10-03-2017 IPR019533 Peptidase S26 CpPa04_RS06700 2d8bcf08d4a6fffe8cf7a84a3ac34b51 253 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 30 238 8.8E-39 T 10-03-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CpPa04_RS06700 2d8bcf08d4a6fffe8cf7a84a3ac34b51 253 ProSitePatterns PS00501 Signal peptidases I serine active site. 53 60 - T 10-03-2017 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 CpPa04_RS06700 2d8bcf08d4a6fffe8cf7a84a3ac34b51 253 Pfam PF00717 Peptidase S24-like 51 97 2.0E-7 T 10-03-2017 IPR019759 Peptidase S24/S26A/S26B CpPa04_RS06700 2d8bcf08d4a6fffe8cf7a84a3ac34b51 253 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 44 60 2.3E-19 T 10-03-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CpPa04_RS06700 2d8bcf08d4a6fffe8cf7a84a3ac34b51 253 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 191 210 2.3E-19 T 10-03-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CpPa04_RS06700 2d8bcf08d4a6fffe8cf7a84a3ac34b51 253 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 131 143 2.3E-19 T 10-03-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CpPa04_RS06700 2d8bcf08d4a6fffe8cf7a84a3ac34b51 253 ProSitePatterns PS00761 Signal peptidases I signature 3. 196 209 - T 10-03-2017 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 CpPa04_RS06700 2d8bcf08d4a6fffe8cf7a84a3ac34b51 253 SUPERFAMILY SSF51306 43 95 8.89E-45 T 10-03-2017 IPR015927 Peptidase S24/S26A/S26B/S26C CpPa04_RS06700 2d8bcf08d4a6fffe8cf7a84a3ac34b51 253 SUPERFAMILY SSF51306 126 243 8.89E-45 T 10-03-2017 IPR015927 Peptidase S24/S26A/S26B/S26C CpPa04_RS06700 2d8bcf08d4a6fffe8cf7a84a3ac34b51 253 Gene3D G3DSA:2.10.109.10 191 245 1.6E-37 T 10-03-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain CpPa04_RS06700 2d8bcf08d4a6fffe8cf7a84a3ac34b51 253 Gene3D G3DSA:2.10.109.10 41 141 1.6E-37 T 10-03-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain CpPa04_RS06300 732c9084d1b1bba5c214592e2dd02b62 428 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 33 408 7.0E-89 T 10-03-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CpPa04_RS06300 732c9084d1b1bba5c214592e2dd02b62 428 Pfam PF00860 Permease family 34 389 7.7E-76 T 10-03-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CpPa04_RS05910 355dacb004cd04ea5f1183c24308aa7c 212 SUPERFAMILY SSF56281 1 209 2.1E-45 T 10-03-2017 IPR001279 Metallo-beta-lactamase CpPa04_RS05910 355dacb004cd04ea5f1183c24308aa7c 212 Pfam PF00753 Metallo-beta-lactamase superfamily 9 186 4.0E-25 T 10-03-2017 IPR001279 Metallo-beta-lactamase CpPa04_RS05910 355dacb004cd04ea5f1183c24308aa7c 212 Gene3D G3DSA:3.60.15.10 8 209 2.3E-44 T 10-03-2017 IPR001279 Metallo-beta-lactamase CpPa04_RS05910 355dacb004cd04ea5f1183c24308aa7c 212 SMART SM00849 12 192 4.3E-31 T 10-03-2017 IPR001279 Metallo-beta-lactamase CpPa04_RS02565 bc33184f6174f59e4d2129a0eccb37ff 99 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 4 99 19.216 T 10-03-2017 IPR003482 Transcription factor WhiB CpPa04_RS02565 bc33184f6174f59e4d2129a0eccb37ff 99 Pfam PF02467 Transcription factor WhiB 31 94 1.6E-27 T 10-03-2017 IPR003482 Transcription factor WhiB CpPa04_RS02535 78787209e595c041b1a7b764381f6956 419 Pfam PF13416 Bacterial extracellular solute-binding protein 58 360 1.9E-31 T 10-03-2017 CpPa04_RS02535 78787209e595c041b1a7b764381f6956 419 SUPERFAMILY SSF53850 45 413 9.06E-74 T 10-03-2017 CpPa04_RS02535 78787209e595c041b1a7b764381f6956 419 Gene3D G3DSA:3.40.190.10 56 169 1.3E-20 T 10-03-2017 CpPa04_RS02535 78787209e595c041b1a7b764381f6956 419 Gene3D G3DSA:3.40.190.10 170 353 3.0E-41 T 10-03-2017 CpPa04_RS08235 3f983e2eb5f62ddc60d3d2f78d49166f 681 Pfam PF05425 Copper resistance protein D 240 336 3.8E-20 T 10-03-2017 IPR008457 Copper resistance protein D GO:0016021 CpPa04_RS08235 3f983e2eb5f62ddc60d3d2f78d49166f 681 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 389 632 8.5E-72 T 10-03-2017 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related CpPa04_RS07580 6d6b1dce67725af37f0b5fc97f5eac8b 314 Pfam PF02104 SURF1 family 32 231 6.0E-22 T 10-03-2017 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CpPa04_RS02380 d222660f179a00f4ad4e60359775c963 296 SUPERFAMILY SSF51556 118 245 1.17E-8 T 10-03-2017 IPR032466 Metal-dependent hydrolase CpPa04_RS02380 d222660f179a00f4ad4e60359775c963 296 Gene3D G3DSA:3.20.20.140 126 244 4.7E-7 T 10-03-2017 CpPa04_RS01490 a11b978774c4c151b5b720c1246d8075 103 Pfam PF14012 Protein of unknown function (DUF4229) 22 89 2.0E-23 T 10-03-2017 IPR025323 Protein of unknown function DUF4229 CpPa04_RS04760 151f8ddee4b8d7a9bcc0bc343ef7ec15 146 PRINTS PR01438 Universal stress protein signature 4 22 9.2E-17 T 10-03-2017 IPR006015 Universal stress protein A CpPa04_RS04760 151f8ddee4b8d7a9bcc0bc343ef7ec15 146 PRINTS PR01438 Universal stress protein signature 103 115 9.2E-17 T 10-03-2017 IPR006015 Universal stress protein A CpPa04_RS04760 151f8ddee4b8d7a9bcc0bc343ef7ec15 146 PRINTS PR01438 Universal stress protein signature 121 143 9.2E-17 T 10-03-2017 IPR006015 Universal stress protein A CpPa04_RS04760 151f8ddee4b8d7a9bcc0bc343ef7ec15 146 SUPERFAMILY SSF52402 1 143 3.52E-28 T 10-03-2017 CpPa04_RS04760 151f8ddee4b8d7a9bcc0bc343ef7ec15 146 Gene3D G3DSA:3.40.50.620 2 144 2.0E-33 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS04760 151f8ddee4b8d7a9bcc0bc343ef7ec15 146 Pfam PF00582 Universal stress protein family 4 143 2.6E-27 T 10-03-2017 IPR006016 UspA GO:0006950 CpPa04_RS02715 071f460f4a52bda58e6df79b35fe0438 401 SUPERFAMILY SSF50998 228 371 9.68E-7 T 10-03-2017 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CpPa04_RS02715 071f460f4a52bda58e6df79b35fe0438 401 SUPERFAMILY SSF50998 28 144 9.68E-7 T 10-03-2017 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CpPa04_RS02715 071f460f4a52bda58e6df79b35fe0438 401 Gene3D G3DSA:2.140.10.10 64 229 4.6E-6 T 10-03-2017 IPR027295 Quinoprotein alcohol dehydrogenase-like domain CpPa04_RS02405 48f17f97a1e79428ad8293b3ba445240 145 Pfam PF01381 Helix-turn-helix 19 78 2.1E-12 T 10-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CpPa04_RS02405 48f17f97a1e79428ad8293b3ba445240 145 SUPERFAMILY SSF47413 14 81 1.89E-15 T 10-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CpPa04_RS02405 48f17f97a1e79428ad8293b3ba445240 145 SMART SM00530 18 79 3.9E-14 T 10-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CpPa04_RS02405 48f17f97a1e79428ad8293b3ba445240 145 Gene3D G3DSA:1.10.260.40 7 93 4.1E-21 T 10-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CpPa04_RS05900 2377a05e7e8153bece655cd524ed3ee8 379 Gene3D G3DSA:3.40.50.10540 303 377 6.2E-89 T 10-03-2017 IPR023606 CoA-transferase family III domain CpPa04_RS05900 2377a05e7e8153bece655cd524ed3ee8 379 Gene3D G3DSA:3.40.50.10540 4 214 6.2E-89 T 10-03-2017 IPR023606 CoA-transferase family III domain CpPa04_RS05900 2377a05e7e8153bece655cd524ed3ee8 379 SUPERFAMILY SSF89796 4 378 1.03E-109 T 10-03-2017 IPR023606 CoA-transferase family III domain CpPa04_RS05900 2377a05e7e8153bece655cd524ed3ee8 379 Pfam PF02515 CoA-transferase family III 6 370 6.3E-102 T 10-03-2017 IPR003673 CoA-transferase family III GO:0003824 CpPa04_RS05900 2377a05e7e8153bece655cd524ed3ee8 379 Gene3D G3DSA:3.30.1540.10 221 302 1.2E-21 T 10-03-2017 CpPa04_RS05415 075e499f04b1363c6f1df9e47a60b269 317 Pfam PF06224 Winged helix DNA-binding domain 65 315 6.7E-25 T 10-03-2017 IPR009351 Protein of unknown function DUF1006 CpPa04_RS10220 ddba837ab05fad47a3a5701ef7cc760a 85 Pfam PF04226 Transglycosylase associated protein 36 85 7.0E-12 T 10-03-2017 IPR007341 Transglycosylase-associated protein GO:0016021 CpPa04_RS10005 12d90ebaa84bd0b0ea16c6f459f01682 347 Pfam PF01032 FecCD transport family 26 341 2.4E-86 T 10-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CpPa04_RS10005 12d90ebaa84bd0b0ea16c6f459f01682 347 SUPERFAMILY SSF81345 7 341 4.05E-75 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS10005 12d90ebaa84bd0b0ea16c6f459f01682 347 Gene3D G3DSA:1.10.3470.10 15 345 2.5E-96 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS07305 6df97b079da36eef46fb925922e91e4e 128 ProSitePatterns PS00123 Alkaline phosphatase active site. 19 27 - T 10-03-2017 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CpPa04_RS07305 6df97b079da36eef46fb925922e91e4e 128 SUPERFAMILY SSF51230 3 124 9.29E-34 T 10-03-2017 IPR011053 Single hybrid motif CpPa04_RS07305 6df97b079da36eef46fb925922e91e4e 128 Pfam PF01597 Glycine cleavage H-protein 8 124 1.0E-34 T 10-03-2017 IPR002930 Glycine cleavage system H-protein CpPa04_RS07305 6df97b079da36eef46fb925922e91e4e 128 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 124 5.2E-38 T 10-03-2017 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 CpPa04_RS07305 6df97b079da36eef46fb925922e91e4e 128 Gene3D G3DSA:2.40.50.100 7 124 2.7E-40 T 10-03-2017 CpPa04_RS07305 6df97b079da36eef46fb925922e91e4e 128 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 52 81 - T 10-03-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CpPa04_RS07305 6df97b079da36eef46fb925922e91e4e 128 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 127 25.587 T 10-03-2017 IPR002930 Glycine cleavage system H-protein CpPa04_RS01930 2dd3793edf90426ac0221fe8167fc716 468 SUPERFAMILY SSF161098 211 452 2.35E-50 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS01930 2dd3793edf90426ac0221fe8167fc716 468 Gene3D G3DSA:1.10.3720.10 229 459 1.3E-55 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS01930 2dd3793edf90426ac0221fe8167fc716 468 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 250 456 1.5E-21 T 10-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CpPa04_RS01930 2dd3793edf90426ac0221fe8167fc716 468 SUPERFAMILY SSF160964 162 207 5.89E-5 T 10-03-2017 CpPa04_RS02265 ec3809f2183802132f9a6349cc0c1875 280 Pfam PF00950 ABC 3 transport family 14 264 1.1E-34 T 10-03-2017 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CpPa04_RS02265 ec3809f2183802132f9a6349cc0c1875 280 SUPERFAMILY SSF81345 11 263 1.96E-20 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS02265 ec3809f2183802132f9a6349cc0c1875 280 Gene3D G3DSA:1.10.3470.10 55 264 4.8E-7 T 10-03-2017 IPR029022 ABC transporter, BtuC-like CpPa04_RS07245 14b34cff6b13134c6b8c2d7c989b399d 640 PIRSF PIRSF001589 1 636 1.6E-177 T 10-03-2017 CpPa04_RS07245 14b34cff6b13134c6b8c2d7c989b399d 640 Gene3D G3DSA:3.60.20.10 1 229 2.2E-70 T 10-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal CpPa04_RS07245 14b34cff6b13134c6b8c2d7c989b399d 640 Pfam PF00733 Asparagine synthase 250 619 1.7E-106 T 10-03-2017 IPR001962 Asparagine synthase GO:0004066|GO:0006529 CpPa04_RS07245 14b34cff6b13134c6b8c2d7c989b399d 640 Pfam PF13537 Glutamine amidotransferase domain 49 170 3.0E-42 T 10-03-2017 IPR017932 Glutamine amidotransferase type 2 domain CpPa04_RS07245 14b34cff6b13134c6b8c2d7c989b399d 640 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 556 7.0E-152 T 10-03-2017 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CpPa04_RS07245 14b34cff6b13134c6b8c2d7c989b399d 640 Gene3D G3DSA:3.40.50.620 472 619 9.3E-96 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS07245 14b34cff6b13134c6b8c2d7c989b399d 640 Gene3D G3DSA:3.40.50.620 230 385 9.3E-96 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS07245 14b34cff6b13134c6b8c2d7c989b399d 640 SUPERFAMILY SSF52402 242 389 4.19E-83 T 10-03-2017 CpPa04_RS07245 14b34cff6b13134c6b8c2d7c989b399d 640 SUPERFAMILY SSF52402 476 615 4.19E-83 T 10-03-2017 CpPa04_RS07245 14b34cff6b13134c6b8c2d7c989b399d 640 SUPERFAMILY SSF56235 1 230 2.32E-55 T 10-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal CpPa04_RS04745 5dec407d5881efaeb7f96f487c8b5cbe 204 Pfam PF01121 Dephospho-CoA kinase 3 181 2.1E-54 T 10-03-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 CpPa04_RS04745 5dec407d5881efaeb7f96f487c8b5cbe 204 Gene3D G3DSA:3.40.50.300 1 196 6.5E-67 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04745 5dec407d5881efaeb7f96f487c8b5cbe 204 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 188 7.7E-49 T 10-03-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 CpPa04_RS04745 5dec407d5881efaeb7f96f487c8b5cbe 204 SUPERFAMILY SSF52540 1 193 5.42E-40 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04745 5dec407d5881efaeb7f96f487c8b5cbe 204 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 197 26.299 T 10-03-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 CpPa04_RS06870 8dbbc67458358ff3c549b382efff99b8 213 TIGRFAM TIGR02234 trp_oprn_chp: membrane protein, TIGR02234 family 9 207 2.6E-49 T 10-03-2017 IPR011746 Trp biosynthesis associated, conserved hypothetical membrane protein CpPa04_RS06870 8dbbc67458358ff3c549b382efff99b8 213 Pfam PF09534 Tryptophan-associated transmembrane protein (Trp_oprn_chp) 11 207 2.9E-49 T 10-03-2017 IPR019051 Trp biosynthesis associated, transmembrane protein, Oprn/Chp CpPa04_RS09965 d7921416ecf8ff30a306682efeee789c 663 Gene3D G3DSA:3.90.550.10 374 448 1.6E-9 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS09965 d7921416ecf8ff30a306682efeee789c 663 Gene3D G3DSA:3.90.550.10 173 339 1.6E-9 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS09965 d7921416ecf8ff30a306682efeee789c 663 Pfam PF13641 Glycosyltransferase like family 2 173 450 1.9E-42 T 10-03-2017 CpPa04_RS09965 d7921416ecf8ff30a306682efeee789c 663 SUPERFAMILY SSF53448 173 337 1.97E-22 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS09965 d7921416ecf8ff30a306682efeee789c 663 SUPERFAMILY SSF53448 367 455 1.97E-22 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS10675 a62c71cedf60dc499d775307e0166593 199 SUPERFAMILY SSF55729 24 124 7.87E-5 T 10-03-2017 IPR016181 Acyl-CoA N-acyltransferase CpPa04_RS10675 a62c71cedf60dc499d775307e0166593 199 Gene3D G3DSA:3.40.630.30 50 166 1.4E-5 T 10-03-2017 IPR016181 Acyl-CoA N-acyltransferase CpPa04_RS08405 bda9c06f27e8178a922a203282b22197 272 SUPERFAMILY SSF144091 81 250 1.31E-25 T 10-03-2017 CpPa04_RS08405 bda9c06f27e8178a922a203282b22197 272 Gene3D G3DSA:1.20.1540.10 85 251 6.2E-16 T 10-03-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CpPa04_RS08405 bda9c06f27e8178a922a203282b22197 272 Pfam PF01694 Rhomboid family 117 252 1.5E-22 T 10-03-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CpPa04_RS01455 192198b387605350582fb39e26a65fe2 535 Pfam PF05140 ResB-like family 22 519 6.9E-133 T 10-03-2017 IPR007816 ResB-like domain CpPa04_RS03335 9d326400adeb438742eb8bf68f3aabe5 54 SUPERFAMILY SSF57829 4 54 7.32E-18 T 10-03-2017 IPR011332 Zinc-binding ribosomal protein GO:0006412 CpPa04_RS03335 9d326400adeb438742eb8bf68f3aabe5 54 Pfam PF00471 Ribosomal protein L33 9 54 5.5E-17 T 10-03-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS03335 9d326400adeb438742eb8bf68f3aabe5 54 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 10-03-2017 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CpPa04_RS03335 9d326400adeb438742eb8bf68f3aabe5 54 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 54 2.1E-23 T 10-03-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS03335 9d326400adeb438742eb8bf68f3aabe5 54 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 54 14.237 T 10-03-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS08640 c92cb497b1f111c8ce342781488dd624 98 Pfam PF14542 GCN5-related N-acetyl-transferase 19 96 1.0E-21 T 10-03-2017 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase CpPa04_RS08640 c92cb497b1f111c8ce342781488dd624 98 Gene3D G3DSA:3.40.630.30 9 97 5.9E-23 T 10-03-2017 IPR016181 Acyl-CoA N-acyltransferase CpPa04_RS08640 c92cb497b1f111c8ce342781488dd624 98 SUPERFAMILY SSF55729 9 97 3.66E-22 T 10-03-2017 IPR016181 Acyl-CoA N-acyltransferase CpPa04_RS02700 13e6b45219e5b24c4b5ce8b8899bb738 86 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 1 76 18.486 T 10-03-2017 IPR003482 Transcription factor WhiB CpPa04_RS02700 13e6b45219e5b24c4b5ce8b8899bb738 86 Pfam PF02467 Transcription factor WhiB 3 71 8.0E-27 T 10-03-2017 IPR003482 Transcription factor WhiB CpPa04_RS00175 c538dafabc847b17a4071b08939cbf9a 457 Pfam PF01098 Cell cycle protein 71 427 6.5E-83 T 10-03-2017 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CpPa04_RS06510 e4a74efefdbeb1e6acd74f45f7a90ef4 184 Pfam PF02576 Putative ribosome maturation factor RimP 12 152 1.7E-22 T 10-03-2017 IPR003728 Ribosome maturation factor RimP GO:0042274 CpPa04_RS06510 e4a74efefdbeb1e6acd74f45f7a90ef4 184 Gene3D G3DSA:3.30.300.70 7 86 8.6E-12 T 10-03-2017 IPR028989 Ribosome maturation factor RimP, N-terminal CpPa04_RS06510 e4a74efefdbeb1e6acd74f45f7a90ef4 184 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 7 158 15.486 T 10-03-2017 IPR003728 Ribosome maturation factor RimP GO:0042274 CpPa04_RS06510 e4a74efefdbeb1e6acd74f45f7a90ef4 184 SUPERFAMILY SSF75420 3 89 1.44E-15 T 10-03-2017 IPR028989 Ribosome maturation factor RimP, N-terminal CpPa04_RS10460 5d80ac7fea799630a97d6236ea36248d 229 Gene3D G3DSA:3.20.20.70 4 228 6.3E-71 T 10-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CpPa04_RS10460 5d80ac7fea799630a97d6236ea36248d 229 SUPERFAMILY SSF51366 9 226 1.51E-47 T 10-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CpPa04_RS10460 5d80ac7fea799630a97d6236ea36248d 229 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 32 228 2.5E-46 T 10-03-2017 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 CpPa04_RS07255 22441844b4c6fc5ab75437a3d95b30b1 243 Pfam PF11241 Protein of unknown function (DUF3043) 48 240 3.3E-53 T 10-03-2017 IPR021403 Protein of unknown function DUF3043 CpPa04_RS09640 f13f5d6997047ccc8b163b54ff62a8a3 133 Pfam PF13411 MerR HTH family regulatory protein 15 80 6.8E-17 T 10-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CpPa04_RS09640 f13f5d6997047ccc8b163b54ff62a8a3 133 Gene3D G3DSA:1.10.1660.10 15 103 1.7E-22 T 10-03-2017 CpPa04_RS09640 f13f5d6997047ccc8b163b54ff62a8a3 133 SUPERFAMILY SSF46955 14 102 1.6E-19 T 10-03-2017 IPR009061 Putative DNA-binding domain CpPa04_RS09640 f13f5d6997047ccc8b163b54ff62a8a3 133 SMART SM00422 13 82 2.8E-25 T 10-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CpPa04_RS03380 fec58e5d6bada965b892240a86494305 140 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 1.7E-8 T 10-03-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CpPa04_RS03380 fec58e5d6bada965b892240a86494305 140 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 88 97 1.7E-8 T 10-03-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CpPa04_RS03380 fec58e5d6bada965b892240a86494305 140 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 78 86 1.7E-8 T 10-03-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CpPa04_RS03380 fec58e5d6bada965b892240a86494305 140 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 132 3.0E-32 T 10-03-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CpPa04_RS03380 fec58e5d6bada965b892240a86494305 140 SUPERFAMILY SSF81330 10 113 9.42E-28 T 10-03-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CpPa04_RS03380 fec58e5d6bada965b892240a86494305 140 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 130 5.6E-40 T 10-03-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CpPa04_RS03660 867e7e0fd9ee7405a6321bd18b6626ab 273 PIRSF PIRSF009160 1 273 3.5E-93 T 10-03-2017 IPR010539 Protein of unknown function UCP009160 CpPa04_RS03660 867e7e0fd9ee7405a6321bd18b6626ab 273 Pfam PF12811 Bax inhibitor 1 like 5 272 3.4E-79 T 10-03-2017 IPR010539 Protein of unknown function UCP009160 CpPa04_RS04385 913f6b3cabfda3706c1a2408cf499e92 318 SUPERFAMILY SSF52467 192 312 2.42E-41 T 10-03-2017 IPR029035 DHS-like NAD/FAD-binding domain CpPa04_RS04385 913f6b3cabfda3706c1a2408cf499e92 318 SUPERFAMILY SSF52402 3 178 4.69E-27 T 10-03-2017 CpPa04_RS04385 913f6b3cabfda3706c1a2408cf499e92 318 Gene3D G3DSA:3.40.50.620 1 180 7.4E-29 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS04385 913f6b3cabfda3706c1a2408cf499e92 318 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 193 276 9.8E-32 T 10-03-2017 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 CpPa04_RS04385 913f6b3cabfda3706c1a2408cf499e92 318 Pfam PF01012 Electron transfer flavoprotein domain 5 173 4.1E-18 T 10-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CpPa04_RS04385 913f6b3cabfda3706c1a2408cf499e92 318 SMART SM00893 4 192 2.3E-14 T 10-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CpPa04_RS04385 913f6b3cabfda3706c1a2408cf499e92 318 Gene3D G3DSA:3.40.50.1220 188 314 2.6E-50 T 10-03-2017 IPR029035 DHS-like NAD/FAD-binding domain CpPa04_RS04385 913f6b3cabfda3706c1a2408cf499e92 318 PIRSF PIRSF000089 1 318 5.3E-85 T 10-03-2017 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 CpPa04_RS05085 93e011ab93e75f1011e0c284158cc643 202 Pfam PF02577 Bifunctional nuclease 10 133 1.4E-32 T 10-03-2017 IPR003729 Bifunctional nuclease domain GO:0004518 CpPa04_RS05085 93e011ab93e75f1011e0c284158cc643 202 SUPERFAMILY SSF103256 3 139 9.94E-34 T 10-03-2017 IPR003729 Bifunctional nuclease domain GO:0004518 CpPa04_RS04510 0c5b57469efdeb4e27ff12fd3b8b0f45 564 SUPERFAMILY SSF50182 109 168 1.14E-11 T 10-03-2017 IPR010920 LSM domain CpPa04_RS04510 0c5b57469efdeb4e27ff12fd3b8b0f45 564 Gene3D G3DSA:2.30.30.60 125 169 5.0E-13 T 10-03-2017 CpPa04_RS04510 0c5b57469efdeb4e27ff12fd3b8b0f45 564 Pfam PF00924 Mechanosensitive ion channel 67 272 5.0E-29 T 10-03-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CpPa04_RS07630 06c30e886a4ec82c37ce224d85d4f689 253 Pfam PF03458 UPF0126 domain 18 91 9.9E-15 T 10-03-2017 IPR005115 Uncharacterised domain UPF0126 CpPa04_RS07630 06c30e886a4ec82c37ce224d85d4f689 253 Pfam PF03458 UPF0126 domain 106 177 1.2E-17 T 10-03-2017 IPR005115 Uncharacterised domain UPF0126 CpPa04_RS08555 c5ec627154f2f97a4719960b82e8858c 244 Gene3D G3DSA:3.40.30.10 79 232 4.5E-12 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS08555 c5ec627154f2f97a4719960b82e8858c 244 SUPERFAMILY SSF52833 80 232 1.12E-16 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS08555 c5ec627154f2f97a4719960b82e8858c 244 Pfam PF13462 Thioredoxin 78 235 2.5E-14 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS06570 cea1eeb6802f1a5332aae834ab315e31 499 SUPERFAMILY SSF51905 114 142 4.46E-24 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS06570 cea1eeb6802f1a5332aae834ab315e31 499 SUPERFAMILY SSF51905 11 73 4.46E-24 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS06570 cea1eeb6802f1a5332aae834ab315e31 499 SUPERFAMILY SSF51905 175 333 4.46E-24 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS06570 cea1eeb6802f1a5332aae834ab315e31 499 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 10 496 50.77 T 10-03-2017 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 CpPa04_RS06570 cea1eeb6802f1a5332aae834ab315e31 499 Gene3D G3DSA:3.50.50.60 154 334 2.4E-20 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS06570 cea1eeb6802f1a5332aae834ab315e31 499 Gene3D G3DSA:3.50.50.60 12 104 2.4E-20 T 10-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CpPa04_RS06570 cea1eeb6802f1a5332aae834ab315e31 499 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 14 494 4.3E-234 T 10-03-2017 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 CpPa04_RS06570 cea1eeb6802f1a5332aae834ab315e31 499 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 13 496 2.9E-220 T 10-03-2017 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 CpPa04_RS04495 bb05e9b5e6ea3a220e756d500b440879 474 Pfam PF07681 DoxX 312 394 6.0E-8 T 10-03-2017 IPR032808 DoxX family CpPa04_RS05360 cf6162eb0070314edbe988f8a3c46876 334 Gene3D G3DSA:2.130.10.10 232 329 5.1E-7 T 10-03-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CpPa04_RS05360 cf6162eb0070314edbe988f8a3c46876 334 SUPERFAMILY SSF63829 97 328 9.81E-10 T 10-03-2017 CpPa04_RS07465 d277b68ca6feb09fe4066bb1cae7ca7b 356 Pfam PF13303 Phosphotransferase system, EIIC 17 353 4.0E-80 T 10-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CpPa04_RS04460 7a160efa1f34ea34796e9e062c4a03aa 357 Pfam PF01497 Periplasmic binding protein 65 308 6.1E-28 T 10-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CpPa04_RS04460 7a160efa1f34ea34796e9e062c4a03aa 357 Gene3D G3DSA:3.40.50.1980 95 180 4.8E-5 T 10-03-2017 CpPa04_RS04460 7a160efa1f34ea34796e9e062c4a03aa 357 SUPERFAMILY SSF53807 96 329 6.28E-34 T 10-03-2017 CpPa04_RS04460 7a160efa1f34ea34796e9e062c4a03aa 357 Gene3D G3DSA:3.40.50.1980 181 317 2.5E-27 T 10-03-2017 CpPa04_RS00290 2911ecc9e2d3a24ca2f3e98254987014 295 Pfam PF00005 ABC transporter 42 186 3.4E-31 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS00290 2911ecc9e2d3a24ca2f3e98254987014 295 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS00290 2911ecc9e2d3a24ca2f3e98254987014 295 SUPERFAMILY SSF52540 38 263 8.28E-70 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00290 2911ecc9e2d3a24ca2f3e98254987014 295 SMART SM00382 50 236 1.1E-16 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS00290 2911ecc9e2d3a24ca2f3e98254987014 295 Gene3D G3DSA:3.40.50.300 1 260 1.0E-70 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS06515 eacdfccea7121e0ee9bbc64c9d4f5f6b 308 SUPERFAMILY SSF47240 172 292 3.08E-14 T 10-03-2017 IPR009078 Ferritin-like superfamily CpPa04_RS06515 eacdfccea7121e0ee9bbc64c9d4f5f6b 308 Gene3D G3DSA:1.20.1260.10 171 292 9.1E-31 T 10-03-2017 IPR012347 Ferritin-related CpPa04_RS06515 eacdfccea7121e0ee9bbc64c9d4f5f6b 308 Pfam PF14530 Domain of unknown function (DUF4439) 175 289 1.2E-9 T 10-03-2017 IPR029447 Domain of unknown function DUF4439 CpPa04_RS06080 85266b9d6484402571e3d3d280e186a3 435 Pfam PF09594 Protein of unknown function (DUF2029) 110 334 2.4E-29 T 10-03-2017 IPR018584 Glycosyltransferase family 87 GO:0016758 CpPa04_RS02925 0cbfce33419426ae2b96059b4febf437 542 Pfam PF03806 AbgT putative transporter family 278 541 1.4E-83 T 10-03-2017 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 CpPa04_RS02925 0cbfce33419426ae2b96059b4febf437 542 Pfam PF03806 AbgT putative transporter family 22 247 7.7E-72 T 10-03-2017 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 CpPa04_RS07070 1e4d18515614f562ce2e22c6faf1de1a 218 Pfam PF08478 POTRA domain, FtsQ-type 30 97 1.8E-16 T 10-03-2017 IPR013685 Polypeptide-transport-associated, FtsQ-type CpPa04_RS07070 1e4d18515614f562ce2e22c6faf1de1a 218 Pfam PF03799 Cell division protein FtsQ 108 201 2.2E-7 T 10-03-2017 IPR005548 Cell division protein FtsQ/DivIB CpPa04_RS10140 b61a6a31778adf49e9bb1065e54bb358 314 Pfam PF07751 Abi-like protein 31 233 1.8E-48 T 10-03-2017 IPR011664 Abortive infection system protein AbiD/AbiF-like CpPa04_RS03825 164e4fc759fb4801271b5db112edf011 308 Pfam PF05661 Protein of unknown function (DUF808) 4 295 3.9E-119 T 10-03-2017 IPR008526 Inner membrane protein YedI CpPa04_RS03825 164e4fc759fb4801271b5db112edf011 308 PIRSF PIRSF016660 1 307 3.6E-109 T 10-03-2017 IPR008526 Inner membrane protein YedI CpPa04_RS09605 61d5d6dfc8427e0fe4816dbb05d9dfe7 278 Gene3D G3DSA:3.60.110.10 1 262 1.9E-59 T 10-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CpPa04_RS09605 61d5d6dfc8427e0fe4816dbb05d9dfe7 278 Pfam PF00795 Carbon-nitrogen hydrolase 2 256 2.5E-36 T 10-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CpPa04_RS09605 61d5d6dfc8427e0fe4816dbb05d9dfe7 278 SUPERFAMILY SSF56317 1 262 9.03E-56 T 10-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CpPa04_RS06135 ec79951215ff09a0346ccba55721e791 97 Pfam PF13834 Domain of unknown function (DUF4193) 1 97 2.2E-34 T 10-03-2017 IPR025242 Protein of unknown function DUF4193 CpPa04_RS06165 40a00a99d27529706315aa85c2421568 79 Pfam PF11238 Protein of unknown function (DUF3039) 21 75 2.4E-26 T 10-03-2017 IPR021400 Protein of unknown function DUF3039 CpPa04_RS05920 b701ebef3d3990ff2ce4ff3ab4f7cf2c 284 SUPERFAMILY SSF50891 122 282 1.45E-36 T 10-03-2017 IPR029000 Cyclophilin-like domain CpPa04_RS05920 b701ebef3d3990ff2ce4ff3ab4f7cf2c 284 Gene3D G3DSA:2.40.100.10 112 282 1.6E-37 T 10-03-2017 IPR029000 Cyclophilin-like domain CpPa04_RS05920 b701ebef3d3990ff2ce4ff3ab4f7cf2c 284 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 123 282 6.4E-28 T 10-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CpPa04_RS00255 a42921f2e4309ee2c475f4a116d68fcc 214 Pfam PF10099 Anti-sigma-K factor rskA 30 210 1.5E-23 T 10-03-2017 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 CpPa04_RS09540 f3cdbb51698df39098c2d9f25ee6506c 268 SMART SM00382 44 226 3.6E-9 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS09540 f3cdbb51698df39098c2d9f25ee6506c 268 Pfam PF00005 ABC transporter 35 178 5.3E-24 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS09540 f3cdbb51698df39098c2d9f25ee6506c 268 SUPERFAMILY SSF52540 15 241 2.87E-54 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09540 f3cdbb51698df39098c2d9f25ee6506c 268 Gene3D G3DSA:3.40.50.300 14 239 1.2E-58 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02770 ce895e8fa3149a4b8a5248edda6e706e 171 Pfam PF01863 Protein of unknown function DUF45 94 151 1.5E-16 T 10-03-2017 IPR002725 Protein of unknown function DUF45 CpPa04_RS08410 3880d94b3eeb7d26d037f1e76b897b32 178 Pfam PF09438 Domain of unknown function (DUF2017) 11 177 3.3E-51 T 10-03-2017 IPR018561 Domain of unknown function DUF2017 CpPa04_RS06795 c2c8a65f49c0c9e0d7872c37753fb436 176 Pfam PF02620 Uncharacterized ACR, COG1399 64 175 1.4E-21 T 10-03-2017 IPR003772 Protein of unknown function DUF177 CpPa04_RS00815 c77c4e1100575c0f3e6c745c68a07ef1 348 Gene3D G3DSA:3.30.420.10 16 184 5.9E-21 T 10-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CpPa04_RS00815 c77c4e1100575c0f3e6c745c68a07ef1 348 SUPERFAMILY SSF53098 19 124 2.88E-12 T 10-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CpPa04_RS00815 c77c4e1100575c0f3e6c745c68a07ef1 348 Gene3D G3DSA:3.40.50.10190 261 336 2.0E-4 T 10-03-2017 IPR001357 BRCT domain CpPa04_RS00590 ce89fae5b6bc42c1e2f9a529921a3516 301 Pfam PF01061 ABC-2 type transporter 52 262 2.0E-27 T 10-03-2017 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CpPa04_RS10205 75a5c5d316b42b64310fd0e9c02042d7 415 Pfam PF02096 60Kd inner membrane protein 47 284 3.7E-31 T 10-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CpPa04_RS10205 75a5c5d316b42b64310fd0e9c02042d7 415 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 47 284 1.9E-37 T 10-03-2017 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CpPa04_RS02290 adcc174e58368bf5689c2cd23bf72f92 108 Pfam PF11222 Protein of unknown function (DUF3017) 30 101 6.5E-24 T 10-03-2017 IPR021385 Protein of unknown function DUF3017 CpPa04_RS00120 c305ca76ed741a19b068631dedd92ec7 117 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 2 67 9.6E-9 T 10-03-2017 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 CpPa04_RS03435 229782012b3d604544f89cccce050098 663 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 162 609 1.5E-160 T 10-03-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CpPa04_RS03435 229782012b3d604544f89cccce050098 663 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 124 609 1.5E-166 T 10-03-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CpPa04_RS03435 229782012b3d604544f89cccce050098 663 ProSitePatterns PS01303 BCCT family of transporters signature. 427 436 - T 10-03-2017 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 CpPa04_RS04475 c4e3700b75a25280f8e980ff3b5dd2fa 370 SUPERFAMILY SSF51430 21 347 7.2E-85 T 10-03-2017 IPR023210 NADP-dependent oxidoreductase domain CpPa04_RS04475 c4e3700b75a25280f8e980ff3b5dd2fa 370 Gene3D G3DSA:3.20.20.100 21 348 5.6E-84 T 10-03-2017 IPR023210 NADP-dependent oxidoreductase domain CpPa04_RS04475 c4e3700b75a25280f8e980ff3b5dd2fa 370 Pfam PF00248 Aldo/keto reductase family 36 346 1.2E-66 T 10-03-2017 IPR023210 NADP-dependent oxidoreductase domain CpPa04_RS07820 f8497d50c6930a526dd74b38e4a05c9f 222 Pfam PF12079 Protein of unknown function (DUF3558) 39 217 3.9E-11 T 10-03-2017 IPR024520 Protein of unknown function DUF3558 CpPa04_RS05660 16d48ebe81c541ed6aa7f07357400451 188 Pfam PF10756 Bacterial PH domain 109 178 2.7E-21 T 10-03-2017 IPR019692 Protein of unknown function DUF2581 CpPa04_RS08215 6612a7e12102fdb4174267bf7ad79142 58 TIGRFAM TIGR03892 thiopep_precurs: thiazolylpeptide-type bacteriocin precursor 17 58 1.6E-6 T 10-03-2017 IPR023895 Thiazolylpeptide-type bacteriocin precursor CpPa04_RS07555 59e1bc88104860b36b23495e07a41d0a 238 Pfam PF02591 C4-type zinc ribbon domain 200 233 6.4E-10 T 10-03-2017 IPR003743 C4-type zinc ribbon domain CpPa04_RS01120 aba4237f4147ede74326779634fc0b57 251 Pfam PF00482 Type II secretion system (T2SS), protein F 86 205 1.0E-6 T 10-03-2017 IPR018076 Type II secretion system F domain CpPa04_RS09615 286897786dbeeecbee047f8bde486d44 363 Pfam PF06259 Alpha/beta hydrolase 166 299 1.3E-19 T 10-03-2017 IPR010427 Protein of unknown function DUF1023 CpPa04_RS09615 286897786dbeeecbee047f8bde486d44 363 SUPERFAMILY SSF53474 183 313 8.93E-8 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS09615 286897786dbeeecbee047f8bde486d44 363 Gene3D G3DSA:3.40.50.1820 201 275 4.3E-5 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS10285 b72b6eb647dbe24ed31ee10e499fec0f 67 ProSitePatterns PS01047 Heavy-metal-associated domain. 7 36 - T 10-03-2017 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CpPa04_RS10285 b72b6eb647dbe24ed31ee10e499fec0f 67 Pfam PF00403 Heavy-metal-associated domain 5 62 2.7E-15 T 10-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CpPa04_RS10285 b72b6eb647dbe24ed31ee10e499fec0f 67 SUPERFAMILY SSF55008 1 64 1.18E-17 T 10-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CpPa04_RS10285 b72b6eb647dbe24ed31ee10e499fec0f 67 Gene3D G3DSA:3.30.70.100 1 64 1.1E-21 T 10-03-2017 CpPa04_RS01975 c13bb478401fa63970bf847ee41a3a69 694 SUPERFAMILY SSF50939 85 497 3.36E-69 T 10-03-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 CpPa04_RS01975 c13bb478401fa63970bf847ee41a3a69 694 Gene3D G3DSA:2.120.10.10 90 500 1.0E-79 T 10-03-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 CpPa04_RS01975 c13bb478401fa63970bf847ee41a3a69 694 Pfam PF13088 BNR repeat-like domain 136 472 2.4E-21 T 10-03-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 CpPa04_RS00190 3683502290cf0dcc1a66faf6bdc546ee 317 SMART SM00240 239 289 5.1E-13 T 10-03-2017 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CpPa04_RS00190 3683502290cf0dcc1a66faf6bdc546ee 317 Gene3D G3DSA:2.60.200.20 214 310 3.7E-28 T 10-03-2017 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CpPa04_RS00190 3683502290cf0dcc1a66faf6bdc546ee 317 Pfam PF12401 Protein of unknown function (DUF2662) 8 120 3.4E-33 T 10-03-2017 IPR022128 Protein of unknown function DUF3662 CpPa04_RS00190 3683502290cf0dcc1a66faf6bdc546ee 317 SUPERFAMILY SSF49879 184 314 1.03E-32 T 10-03-2017 IPR008984 SMAD/FHA domain GO:0005515 CpPa04_RS00190 3683502290cf0dcc1a66faf6bdc546ee 317 Pfam PF00498 FHA domain 241 303 5.4E-18 T 10-03-2017 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CpPa04_RS09065 09b97c9d99d228d7c2bcf51ead91eba1 66 SUPERFAMILY SSF47598 4 54 4.5E-9 T 10-03-2017 IPR010985 Ribbon-helix-helix GO:0006355 CpPa04_RS09065 09b97c9d99d228d7c2bcf51ead91eba1 66 Gene3D G3DSA:1.10.1220.10 8 47 1.9E-6 T 10-03-2017 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CpPa04_RS04715 391e1042e2f78fe041a4244d77a7d3c4 313 Pfam PF04018 Domain of unknown function (DUF368) 27 267 3.2E-67 T 10-03-2017 IPR007163 Protein of unknown function DUF368 CpPa04_RS01440 f3f6522be68249f546a7c151f3092812 202 SMART SM00855 5 157 3.0E-17 T 10-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 CpPa04_RS01440 f3f6522be68249f546a7c151f3092812 202 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 189 4.6E-36 T 10-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 CpPa04_RS01440 f3f6522be68249f546a7c151f3092812 202 Gene3D G3DSA:3.40.50.1240 5 189 2.0E-32 T 10-03-2017 IPR029033 Histidine phosphatase superfamily CpPa04_RS01440 f3f6522be68249f546a7c151f3092812 202 SUPERFAMILY SSF53254 3 195 1.99E-37 T 10-03-2017 IPR029033 Histidine phosphatase superfamily CpPa04_RS02030 3ae5b4c008b4f2c692d2cc2dd34bbe21 140 TIGRFAM TIGR02611 TIGR02611: TIGR02611 family protein 8 127 1.2E-41 T 10-03-2017 IPR013434 Conserved hypothetical protein CHP02611 CpPa04_RS02030 3ae5b4c008b4f2c692d2cc2dd34bbe21 140 Pfam PF09656 Putative transmembrane protein (PGPGW) 32 82 7.8E-21 T 10-03-2017 IPR019099 Uncharacterised protein family PGPGW, transmembrane CpPa04_RS04050 6c61df4f9cc4dea639551055ce68aca7 220 Gene3D G3DSA:3.40.190.10 36 219 3.6E-9 T 10-03-2017 CpPa04_RS05265 d2ae1a05cc0f00f78368f0edf69da875 485 Hamap MF_02111 Pup--protein ligase [pafA]. 15 471 48.5 T 10-03-2017 IPR022279 Pup--protein ligase GO:0010498|GO:0016879|GO:0019941 CpPa04_RS05265 d2ae1a05cc0f00f78368f0edf69da875 485 Pfam PF03136 Pup-ligase protein 18 441 1.4E-145 T 10-03-2017 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 CpPa04_RS05265 d2ae1a05cc0f00f78368f0edf69da875 485 TIGRFAM TIGR03686 pupylate_PafA: Pup--protein ligase 17 471 1.1E-215 T 10-03-2017 IPR022279 Pup--protein ligase GO:0010498|GO:0016879|GO:0019941 CpPa04_RS05265 d2ae1a05cc0f00f78368f0edf69da875 485 PIRSF PIRSF018077 4 480 1.5E-162 T 10-03-2017 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 CpPa04_RS01940 dc5837aafadb9432ab1307d4b9413249 247 Pfam PF05857 TraX protein 50 206 6.5E-6 T 10-03-2017 IPR008875 TraX CpPa04_RS08920 8c9c5442bed857a2d3042e098ed29423 514 Pfam PF12821 Threonine/Serine exporter, ThrE 320 446 5.6E-17 T 10-03-2017 IPR024528 Threonine/Serine exporter, ThrE CpPa04_RS08920 8c9c5442bed857a2d3042e098ed29423 514 Pfam PF06738 Putative threonine/serine exporter 48 294 8.0E-52 T 10-03-2017 IPR010619 Putative threonine/serine exporter CpPa04_RS05420 6f8a2c45a2204429369a8611fdd4cbee 490 Gene3D G3DSA:3.40.50.720 331 469 1.1E-42 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS05420 6f8a2c45a2204429369a8611fdd4cbee 490 Gene3D G3DSA:3.40.50.720 136 237 1.1E-42 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS05420 6f8a2c45a2204429369a8611fdd4cbee 490 Pfam PF00106 short chain dehydrogenase 154 240 1.1E-6 T 10-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CpPa04_RS05420 6f8a2c45a2204429369a8611fdd4cbee 490 SUPERFAMILY SSF51735 148 245 7.54E-27 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS05420 6f8a2c45a2204429369a8611fdd4cbee 490 SUPERFAMILY SSF51735 336 465 7.54E-27 T 10-03-2017 IPR016040 NAD(P)-binding domain CpPa04_RS05420 6f8a2c45a2204429369a8611fdd4cbee 490 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 246 437 4.8E-8 T 10-03-2017 CpPa04_RS04175 db9f3d9face200910b06df189d5ddee6 158 Gene3D G3DSA:1.10.10.10 2 146 5.4E-35 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS04175 db9f3d9face200910b06df189d5ddee6 158 Pfam PF12802 MarR family 37 98 1.8E-9 T 10-03-2017 CpPa04_RS04175 db9f3d9face200910b06df189d5ddee6 158 SMART SM00347 32 135 2.0E-13 T 10-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CpPa04_RS04175 db9f3d9face200910b06df189d5ddee6 158 SUPERFAMILY SSF46785 2 147 2.78E-29 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS08745 6f81e147b13fe251232f1589102aa7b5 344 Pfam PF00781 Diacylglycerol kinase catalytic domain 2 124 4.3E-27 T 10-03-2017 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 CpPa04_RS08745 6f81e147b13fe251232f1589102aa7b5 344 SUPERFAMILY SSF111331 2 322 1.57E-51 T 10-03-2017 IPR016064 NAD kinase/diacylglycerol kinase-like domain CpPa04_RS08745 6f81e147b13fe251232f1589102aa7b5 344 SMART SM00046 2 136 1.3E-9 T 10-03-2017 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 CpPa04_RS00365 19747ec1fc374f9e135754e772b6cd1b 487 Pfam PF03929 PepSY-associated TM region 40 420 2.2E-57 T 10-03-2017 IPR005625 PepSY-associated TM protein CpPa04_RS08225 898bf767cb5da30909fd23bec4e1f143 252 PIRSF PIRSF006648 9 251 3.6E-14 T 10-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CpPa04_RS06860 b6329e55deebfcdaf1a6cf1a66280a7c 300 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 143 155 - T 10-03-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CpPa04_RS06860 b6329e55deebfcdaf1a6cf1a66280a7c 300 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 17 273 4.3E-46 T 10-03-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CpPa04_RS06860 b6329e55deebfcdaf1a6cf1a66280a7c 300 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 18 272 3.5E-64 T 10-03-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CpPa04_RS06860 b6329e55deebfcdaf1a6cf1a66280a7c 300 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 11 277 15.948 T 10-03-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CpPa04_RS03110 1cbb257bc0331736d7c4e1452303de0f 113 Pfam PF04341 Protein of unknown function, DUF485 24 109 1.8E-34 T 10-03-2017 IPR007436 Protein of unknown function DUF485 CpPa04_RS04140 3d86d7d53ad2da0ee1c54fedf1a070db 194 Pfam PF13395 HNH endonuclease 87 153 4.2E-9 T 10-03-2017 IPR003615 HNH nuclease CpPa04_RS00020 4df6dace0fa5495c06f72f26fe84b18e 190 Pfam PF05258 Protein of unknown function (DUF721) 78 165 1.7E-22 T 10-03-2017 IPR007922 Protein of unknown function DUF721/UPF0232 CpPa04_RS09385 b54ba0a692d845817850486f39d80cfe 174 SUPERFAMILY SSF52833 42 173 1.49E-28 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS09385 b54ba0a692d845817850486f39d80cfe 174 Gene3D G3DSA:3.40.30.10 3 173 1.7E-37 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS09385 b54ba0a692d845817850486f39d80cfe 174 Pfam PF00578 AhpC/TSA family 45 157 1.6E-18 T 10-03-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CpPa04_RS04040 4ad5b2ec50fe9e1c58ffbbeadbfc2722 199 Pfam PF06210 Protein of unknown function (DUF1003) 39 140 7.5E-37 T 10-03-2017 IPR010406 Protein of unknown function DUF1003 CpPa04_RS09215 ca9d3bd55fb6c671232da2e679fd6a48 355 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 323 354 5.1E-4 T 10-03-2017 IPR019931 LPXTG cell wall anchor domain CpPa04_RS04505 27c1693a32575efaf7b155178aa1d833 179 Pfam PF10756 Bacterial PH domain 70 137 3.6E-10 T 10-03-2017 IPR019692 Protein of unknown function DUF2581 CpPa04_RS04505 27c1693a32575efaf7b155178aa1d833 179 ProDom PD072817 ANTIGEN WEIGHT MOLECULAR LOW CFP-6 CGL1269 SEQUENCING DIRECT 63 137 1.0E-18 T 10-03-2017 IPR020535 Low molecular weight antigen Cfp6 CpPa04_RS05295 f02c5410492d327799966195b4d20ccc 261 SUPERFAMILY SSF52980 26 179 1.72E-6 T 10-03-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CpPa04_RS05295 f02c5410492d327799966195b4d20ccc 261 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1 244 3.1E-38 T 10-03-2017 CpPa04_RS03760 f71849afd2c3a435b63b9cbe6f6c1927 189 Pfam PF14030 Protein of unknown function (DUF4245) 7 179 3.9E-44 T 10-03-2017 IPR025339 Protein of unknown function DUF4245 CpPa04_RS09090 7cdac38c42585c272ddfe3d405b830d8 222 Gene3D G3DSA:3.40.50.620 11 67 2.0E-6 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS09090 7cdac38c42585c272ddfe3d405b830d8 222 Gene3D G3DSA:3.40.50.620 95 137 7.8E-5 T 10-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CpPa04_RS09090 7cdac38c42585c272ddfe3d405b830d8 222 SUPERFAMILY SSF52374 11 215 2.56E-34 T 10-03-2017 CpPa04_RS09090 7cdac38c42585c272ddfe3d405b830d8 222 Pfam PF02569 Pantoate-beta-alanine ligase 98 200 4.8E-19 T 10-03-2017 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CpPa04_RS09090 7cdac38c42585c272ddfe3d405b830d8 222 Gene3D G3DSA:3.30.1300.10 138 200 8.9E-10 T 10-03-2017 CpPa04_RS09895 a21cd58c24bc20641e2bbb0aaabef94c 349 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 21 324 3.0E-14 T 10-03-2017 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD CpPa04_RS09895 a21cd58c24bc20641e2bbb0aaabef94c 349 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 7 318 9.6E-21 T 10-03-2017 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD CpPa04_RS04490 e9addb99a621740f6b97a488c9ffa6f9 273 Pfam PF07510 Protein of unknown function (DUF1524) 129 266 6.6E-14 T 10-03-2017 IPR011089 Domain of unknown function DUF1524 CpPa04_RS01385 a5b67f907d0318449a05f0ebb553c1d6 84 SUPERFAMILY SSF52833 9 83 7.64E-13 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS01385 a5b67f907d0318449a05f0ebb553c1d6 84 Pfam PF05768 Glutaredoxin-like domain (DUF836) 10 82 1.0E-13 T 10-03-2017 IPR008554 Glutaredoxin-like CpPa04_RS01385 a5b67f907d0318449a05f0ebb553c1d6 84 Gene3D G3DSA:3.40.30.10 9 83 4.8E-18 T 10-03-2017 IPR012336 Thioredoxin-like fold CpPa04_RS07835 2521b21ad232b41e22413897169c2b2a 439 Pfam PF05525 Branched-chain amino acid transport protein 15 434 7.2E-129 T 10-03-2017 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CpPa04_RS07835 2521b21ad232b41e22413897169c2b2a 439 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 20 422 3.3E-108 T 10-03-2017 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CpPa04_RS04975 c65d27c43223330079adf5a9408c3e22 238 Gene3D G3DSA:3.40.50.300 13 229 1.2E-74 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04975 c65d27c43223330079adf5a9408c3e22 238 Pfam PF02224 Cytidylate kinase 15 229 1.3E-77 T 10-03-2017 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 CpPa04_RS04975 c65d27c43223330079adf5a9408c3e22 238 SUPERFAMILY SSF52540 12 230 3.05E-44 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04975 c65d27c43223330079adf5a9408c3e22 238 TIGRFAM TIGR00017 cmk: cytidylate kinase 13 226 1.4E-73 T 10-03-2017 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 CpPa04_RS04975 c65d27c43223330079adf5a9408c3e22 238 Hamap MF_00238 Cytidylate kinase [cmk]. 13 232 32.295 T 10-03-2017 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 CpPa04_RS04975 c65d27c43223330079adf5a9408c3e22 238 PRINTS PR00988 Uridine kinase signature 12 29 3.7E-7 T 10-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 CpPa04_RS04975 c65d27c43223330079adf5a9408c3e22 238 PRINTS PR00988 Uridine kinase signature 160 170 3.7E-7 T 10-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 CpPa04_RS04975 c65d27c43223330079adf5a9408c3e22 238 PRINTS PR00988 Uridine kinase signature 197 210 3.7E-7 T 10-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 CpPa04_RS09740 cd85039ec7a8f820fdea4dea4a760306 292 Pfam PF01774 UreD urease accessory protein 60 267 1.1E-43 T 10-03-2017 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 CpPa04_RS09740 cd85039ec7a8f820fdea4dea4a760306 292 Hamap MF_01384 Urease accessory protein UreD [ureD]. 17 278 24.597 T 10-03-2017 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 CpPa04_RS08570 04b99828cbeb0ba3e5363914bad426db 114 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 102 1.8E-12 T 10-03-2017 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CpPa04_RS08570 04b99828cbeb0ba3e5363914bad426db 114 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 108 13.416 T 10-03-2017 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CpPa04_RS03415 2a9b89149f26b954d0d6db36d8350f1a 137 Pfam PF07681 DoxX 10 93 1.4E-19 T 10-03-2017 IPR032808 DoxX family CpPa04_RS05855 4d35ec6be046ba7497d1c1272dc5ebcd 291 Pfam PF04228 Putative neutral zinc metallopeptidase 15 283 3.2E-68 T 10-03-2017 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative CpPa04_RS04325 81581bc89d5af43dc5aa7ae3ba0b5149 155 Pfam PF10739 Protein of unknown function (DUF2550) 9 133 3.8E-38 T 10-03-2017 IPR019675 Protein of unknown function DUF2550 CpPa04_RS03495 e93b69dc97387405e5adcdeed7e28e75 236 Pfam PF04973 Nicotinamide mononucleotide transporter 21 227 2.1E-51 T 10-03-2017 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 CpPa04_RS10265 6495ee05e4ebe99919c6c9f7f65e8c40 124 SUPERFAMILY SSF46785 5 75 3.59E-17 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS10265 6495ee05e4ebe99919c6c9f7f65e8c40 124 SMART SM00345 12 71 3.1E-10 T 10-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CpPa04_RS10265 6495ee05e4ebe99919c6c9f7f65e8c40 124 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 71 1.6E-10 T 10-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CpPa04_RS10265 6495ee05e4ebe99919c6c9f7f65e8c40 124 Gene3D G3DSA:1.10.10.10 4 74 2.0E-18 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS06170 4b6586832ee5ee3711015932ec5fa38f 168 Pfam PF11298 Protein of unknown function (DUF3099) 40 111 8.7E-27 T 10-03-2017 IPR021449 Protein of unknown function DUF3099 CpPa04_RS05440 fd6ebb2aac9125cf288afc51a3ebc50d 233 Pfam PF09335 SNARE associated Golgi protein 79 196 2.0E-22 T 10-03-2017 IPR032816 SNARE associated Golgi protein CpPa04_RS00975 48f59c9b24cd2ea520ac7c7e2912adb1 512 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 159 183 3.2E-5 T 10-03-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CpPa04_RS00975 48f59c9b24cd2ea520ac7c7e2912adb1 512 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 370 396 3.2E-5 T 10-03-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CpPa04_RS00975 48f59c9b24cd2ea520ac7c7e2912adb1 512 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 129 148 3.2E-5 T 10-03-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CpPa04_RS00975 48f59c9b24cd2ea520ac7c7e2912adb1 512 Pfam PF00361 Proton-conducting membrane transporter 125 406 5.2E-42 T 10-03-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CpPa04_RS03845 913b4292db5b1abc0b7c68bf78ae7fdc 251 Pfam PF02361 Cobalt transport protein 4 206 8.8E-15 T 10-03-2017 IPR003339 ABC/ECF transporter, transmembrane component CpPa04_RS06370 41b24d9e2af4b13f6eb503c94f4fb506 199 PIRSF PIRSF016661 2 191 3.7E-43 T 10-03-2017 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 CpPa04_RS06370 41b24d9e2af4b13f6eb503c94f4fb506 199 Pfam PF02632 BioY family 39 182 3.0E-29 T 10-03-2017 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 CpPa04_RS10070 27cf5ed9bc1a09e5cefc5bdf6a88be70 427 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 207 349 3.1E-42 T 10-03-2017 IPR004474 Cell envelope-related transcriptional attenuator domain CpPa04_RS10070 27cf5ed9bc1a09e5cefc5bdf6a88be70 427 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 207 349 3.7E-37 T 10-03-2017 IPR004474 Cell envelope-related transcriptional attenuator domain CpPa04_RS07715 f496c5b7f129a1a743954d3244a8bdd9 141 Gene3D G3DSA:1.10.10.10 7 82 1.1E-18 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS07715 f496c5b7f129a1a743954d3244a8bdd9 141 Pfam PF01475 Ferric uptake regulator family 12 131 2.0E-32 T 10-03-2017 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CpPa04_RS07715 f496c5b7f129a1a743954d3244a8bdd9 141 SUPERFAMILY SSF46785 11 135 8.16E-34 T 10-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CpPa04_RS04770 8abae8a12425246a81993283601cd54f 269 Pfam PF07681 DoxX 5 98 1.4E-9 T 10-03-2017 IPR032808 DoxX family CpPa04_RS03930 31d4a3230dca537443dee17562a62e69 185 Pfam PF04138 GtrA-like protein 143 177 8.4E-7 T 10-03-2017 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 CpPa04_RS03930 31d4a3230dca537443dee17562a62e69 185 Pfam PF04138 GtrA-like protein 18 128 2.1E-9 T 10-03-2017 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 CpPa04_RS00755 6913b79d9f5c5a722e212181b6adf5c2 189 Pfam PF05076 Suppressor of fused protein (SUFU) 85 189 1.3E-6 T 10-03-2017 IPR020941 Suppressor of fused-like domain Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5610787|Reactome: R-HSA-5632684 CpPa04_RS09245 6e207b07895d8f278bc5dbd607e66c0e 171 Pfam PF01899 Na+/H+ ion antiporter subunit 15 164 2.5E-24 T 10-03-2017 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 CpPa04_RS05215 997910b62754cee302cf08143f2524b7 243 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 3 240 1.4E-70 T 10-03-2017 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 CpPa04_RS05215 997910b62754cee302cf08143f2524b7 243 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 1 229 9.5E-47 T 10-03-2017 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 CpPa04_RS02920 23ed10aadfd13bfbd92a14ae1d668df4 157 Gene3D G3DSA:3.40.50.300 1 112 5.3E-13 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS02920 23ed10aadfd13bfbd92a14ae1d668df4 157 SUPERFAMILY SSF52540 1 100 2.3E-15 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS09910 ddcb9f8feb5f96a6c30f902907831dab 213 Pfam PF09335 SNARE associated Golgi protein 32 161 2.0E-17 T 10-03-2017 IPR032816 SNARE associated Golgi protein CpPa04_RS04160 c72e2c4e5b7d0200d4982cab22b54fcf 372 Gene3D G3DSA:3.60.21.10 2 250 1.2E-39 T 10-03-2017 IPR029052 Metallo-dependent phosphatase-like CpPa04_RS04160 c72e2c4e5b7d0200d4982cab22b54fcf 372 PIRSF PIRSF033093 2 372 3.5E-125 T 10-03-2017 IPR014577 Uncharacterised conserved protein UCP033093, metallophosphoesterase-type CpPa04_RS04160 c72e2c4e5b7d0200d4982cab22b54fcf 372 Pfam PF00149 Calcineurin-like phosphoesterase 4 105 2.8E-12 T 10-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 CpPa04_RS04160 c72e2c4e5b7d0200d4982cab22b54fcf 372 SUPERFAMILY SSF56300 4 300 3.45E-39 T 10-03-2017 IPR029052 Metallo-dependent phosphatase-like CpPa04_RS09410 ce76b4301e3fd914dac6e1124d2913c2 161 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 19 160 1.9E-13 T 10-03-2017 IPR005126 NapC/NirT cytochrome c, N-terminal CpPa04_RS09410 ce76b4301e3fd914dac6e1124d2913c2 161 SUPERFAMILY SSF48695 19 159 9.98E-23 T 10-03-2017 IPR011031 Multihaem cytochrome CpPa04_RS09410 ce76b4301e3fd914dac6e1124d2913c2 161 TIGRFAM TIGR03153 cytochr_NrfH: cytochrome c nitrite reductase, small subunit 24 158 1.0E-48 T 10-03-2017 IPR017571 Cytochrome c nitrite reductase, small subunit GO:0016021|GO:0022900 CpPa04_RS09410 ce76b4301e3fd914dac6e1124d2913c2 161 Gene3D G3DSA:1.10.3820.10 18 160 1.3E-21 T 10-03-2017 CpPa04_RS07350 34743c2d41e1658e3dfca741633e0c14 69 Pfam PF06305 Protein of unknown function (DUF1049) 13 55 9.3E-7 T 10-03-2017 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 CpPa04_RS06560 f6df828f430fd52c45503146ebf784dc 254 SMART SM00327 74 248 7.2E-10 T 10-03-2017 IPR002035 von Willebrand factor, type A CpPa04_RS06560 f6df828f430fd52c45503146ebf784dc 254 Gene3D G3DSA:3.40.50.410 77 188 5.1E-11 T 10-03-2017 IPR002035 von Willebrand factor, type A CpPa04_RS06560 f6df828f430fd52c45503146ebf784dc 254 SUPERFAMILY SSF53300 77 205 3.12E-19 T 10-03-2017 IPR002035 von Willebrand factor, type A CpPa04_RS06560 f6df828f430fd52c45503146ebf784dc 254 Pfam PF13519 von Willebrand factor type A domain 77 183 1.5E-15 T 10-03-2017 IPR002035 von Willebrand factor, type A CpPa04_RS05195 69d3b0948e04ed5c64752532e6000366 1204 Pfam PF02514 CobN/Magnesium Chelatase 103 1182 0.0 T 10-03-2017 IPR003672 CobN/magnesium chelatase GO:0009058 CpPa04_RS05195 69d3b0948e04ed5c64752532e6000366 1204 TIGRFAM TIGR02257 cobalto_cobN: cobaltochelatase, CobN subunit 25 1194 0.0 T 10-03-2017 IPR011953 Cobaltochelatase, CobN subunit GO:0009236|GO:0051116 CpPa04_RS06095 c71d8031b2c08f416e8adf2f2d844cc4 202 Pfam PF11452 Protein of unknown function (DUF3000) 20 197 1.5E-72 T 10-03-2017 IPR021555 Protein of unknown function DUF3000 CpPa04_RS10270 ea0e902142bb4d20ded1b3f6e22b1c74 460 Gene3D G3DSA:3.40.50.1010 3 167 4.9E-22 T 10-03-2017 IPR029060 PIN domain-like CpPa04_RS10270 ea0e902142bb4d20ded1b3f6e22b1c74 460 Pfam PF01936 NYN domain 4 165 2.2E-18 T 10-03-2017 IPR021139 NYN domain, limkain-b1-type CpPa04_RS00510 8c789b2cdb473a66f0d9202fb9dc553c 691 Pfam PF12249 Arabinofuranosyltransferase A C terminal 508 690 7.0E-77 T 10-03-2017 IPR020959 Arabinofuranosyltransferase AftA, C-terminal GO:0005886|GO:0016021|GO:0016757|GO:0044038 CpPa04_RS00510 8c789b2cdb473a66f0d9202fb9dc553c 691 Pfam PF12250 Arabinofuranosyltransferase N terminal 65 501 1.4E-167 T 10-03-2017 IPR020963 Arabinofuranosyltransferase AftA, N-terminal GO:0005886|GO:0016021|GO:0016757|GO:0044038 CpPa04_RS05585 65289b22124d5ba663c43f996b4d1141 310 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 3 293 18.078 T 10-03-2017 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 CpPa04_RS05585 65289b22124d5ba663c43f996b4d1141 310 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 5 291 8.3E-83 T 10-03-2017 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 CpPa04_RS05585 65289b22124d5ba663c43f996b4d1141 310 Pfam PF01040 UbiA prenyltransferase family 20 262 5.4E-56 T 10-03-2017 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 CpPa04_RS03755 f0bdde94b7e6f6d7ac219a3ebc81b62f 336 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 11 318 7.0E-140 T 10-03-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CpPa04_RS03755 f0bdde94b7e6f6d7ac219a3ebc81b62f 336 SUPERFAMILY SSF56655 9 321 3.53E-110 T 10-03-2017 CpPa04_RS03755 f0bdde94b7e6f6d7ac219a3ebc81b62f 336 PIRSF PIRSF004532 9 329 1.5E-155 T 10-03-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CpPa04_RS03755 f0bdde94b7e6f6d7ac219a3ebc81b62f 336 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 11 325 3.2E-116 T 10-03-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CpPa04_RS03755 f0bdde94b7e6f6d7ac219a3ebc81b62f 336 Gene3D G3DSA:3.30.540.10 9 181 2.1E-63 T 10-03-2017 CpPa04_RS03755 f0bdde94b7e6f6d7ac219a3ebc81b62f 336 Gene3D G3DSA:3.30.540.10 182 330 9.4E-44 T 10-03-2017 CpPa04_RS10000 12450cc7f672074c948a9e741b0ebd09 258 Pfam PF00005 ABC transporter 20 161 1.6E-31 T 10-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CpPa04_RS10000 12450cc7f672074c948a9e741b0ebd09 258 Gene3D G3DSA:3.40.50.300 1 227 5.7E-63 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS10000 12450cc7f672074c948a9e741b0ebd09 258 SMART SM00382 28 210 2.7E-16 T 10-03-2017 IPR003593 AAA+ ATPase domain CpPa04_RS10000 12450cc7f672074c948a9e741b0ebd09 258 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 10-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CpPa04_RS10000 12450cc7f672074c948a9e741b0ebd09 258 SUPERFAMILY SSF52540 2 224 1.16E-57 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS07450 6510b5af2c5176579d29abcd0a73695a 484 Pfam PF02687 FtsX-like permease family 80 199 2.5E-7 T 10-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 CpPa04_RS06410 41c5d089cdbae7127c8223fd45ffd753 343 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 4 326 1.6E-110 T 10-03-2017 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 CpPa04_RS06410 41c5d089cdbae7127c8223fd45ffd753 343 Pfam PF03741 Integral membrane protein TerC family 74 280 2.2E-54 T 10-03-2017 IPR005496 Integral membrane protein TerC GO:0016021 CpPa04_RS08355 6deacfa5f2b003f8cf82ed691aa3e8dc 252 SUPERFAMILY SSF50494 39 116 1.35E-5 T 10-03-2017 IPR009003 Peptidase S1, PA clan CpPa04_RS08355 6deacfa5f2b003f8cf82ed691aa3e8dc 252 Gene3D G3DSA:2.40.10.10 45 119 2.9E-5 T 10-03-2017 CpPa04_RS00050 73bcecaf0bbdefaca164d8df18480255 114 Pfam PF12089 Transmembrane domain of unknown function (DUF3566) 5 110 2.1E-29 T 10-03-2017 IPR021949 Domain of unknown function DUF3566. transmembrane CpPa04_RS07460 1d9acc6303106087852c009f4c270e8f 768 Pfam PF04213 Htaa 122 290 5.4E-37 T 10-03-2017 IPR007331 Htaa CpPa04_RS08675 ef51118652192be6e117e74d368546c3 507 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 469 1.3E-154 T 10-03-2017 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 CpPa04_RS08675 ef51118652192be6e117e74d368546c3 507 PIRSF PIRSF006446 1 491 7.8E-114 T 10-03-2017 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 CpPa04_RS07325 5e09b417e9e1d74e9f68fae56052c594 256 Pfam PF13829 Domain of unknown function (DUF4191) 22 241 1.3E-81 T 10-03-2017 IPR025445 Protein of unknown function DUF4191 CpPa04_RS07325 5e09b417e9e1d74e9f68fae56052c594 256 ProDom PD037701 MEMBRANE INTEGRAL TRANSMEMBRANE RV2219/MT2276 NARROWLY PROBABLE PRECURSOR SIGNAL MLCB22.21 30 224 2.0E-72 T 10-03-2017 CpPa04_RS06365 44f3e0ebea5b0676799d7b019a5f4b3e 70 Pfam PF11248 Protein of unknown function (DUF3046) 1 60 3.2E-25 T 10-03-2017 IPR021408 Protein of unknown function DUF3046 CpPa04_RS03975 2d6043e8f5de1976a3e3bb4893b81819 244 Gene3D G3DSA:3.90.550.10 2 123 1.6E-15 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS03975 2d6043e8f5de1976a3e3bb4893b81819 244 Pfam PF00535 Glycosyl transferase family 2 4 118 2.4E-17 T 10-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CpPa04_RS03975 2d6043e8f5de1976a3e3bb4893b81819 244 SUPERFAMILY SSF53448 3 227 8.94E-50 T 10-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases CpPa04_RS05575 1f4c2ca0467c9d3a563875844bcdbe10 266 Pfam PF12698 ABC-2 family transporter protein 83 256 2.2E-10 T 10-03-2017 CpPa04_RS01110 d6c622e26233ed325127242a7ce6361c 343 TIGRFAM TIGR03815 CpaE_hom_Actino: helicase/secretion neighborhood CpaE-like protein 10 339 1.7E-72 T 10-03-2017 IPR022521 Conserved hypothetical protein CHP03815, CpaE-like CpPa04_RS01110 d6c622e26233ed325127242a7ce6361c 343 Gene3D G3DSA:3.40.50.300 115 308 6.6E-16 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS01110 d6c622e26233ed325127242a7ce6361c 343 SUPERFAMILY SSF52540 117 294 7.97E-15 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS04690 d94dff302ff545329120316d1b8522e6 247 Pfam PF01925 Sulfite exporter TauE/SafE 8 236 1.9E-19 T 10-03-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 CpPa04_RS03405 60fc9aac9731bdbde805594e00e1bcb0 238 Pfam PF13302 Acetyltransferase (GNAT) domain 46 191 1.8E-16 T 10-03-2017 IPR000182 GNAT domain GO:0008080 CpPa04_RS03405 60fc9aac9731bdbde805594e00e1bcb0 238 Gene3D G3DSA:3.40.630.30 40 221 4.1E-47 T 10-03-2017 IPR016181 Acyl-CoA N-acyltransferase CpPa04_RS03405 60fc9aac9731bdbde805594e00e1bcb0 238 SUPERFAMILY SSF55729 44 215 6.67E-38 T 10-03-2017 IPR016181 Acyl-CoA N-acyltransferase CpPa04_RS02050 662d110727fceccca05d5203333872c6 351 TIGRFAM TIGR03931 T7SS_Rv3446c: type VII secretion-associated protein, Rv3446c family 151 347 2.4E-39 T 10-03-2017 IPR023840 Type VII secretion system Rv3446c CpPa04_RS05190 e756bbf495e4ea6387d03c2616c8bccb 176 Pfam PF04186 FxsA cytoplasmic membrane protein 7 108 3.5E-19 T 10-03-2017 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 CpPa04_RS09870 aa7b708c528e5658d23bdfa3aaea50be 255 SUPERFAMILY SSF53335 34 228 1.52E-23 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS09870 aa7b708c528e5658d23bdfa3aaea50be 255 Pfam PF08241 Methyltransferase domain 61 149 3.5E-14 T 10-03-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CpPa04_RS09870 aa7b708c528e5658d23bdfa3aaea50be 255 Gene3D G3DSA:3.40.50.150 56 252 2.7E-23 T 10-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CpPa04_RS03980 37491f84d822009c69d1ff322c890439 95 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 53 81 1.2E-7 T 10-03-2017 IPR019933 DivIVA domain CpPa04_RS02455 6ac7f038cc1a30e2defe80f9ec19c578 704 Pfam PF01757 Acyltransferase family 19 348 1.1E-17 T 10-03-2017 IPR002656 Acyltransferase 3 GO:0016747 CpPa04_RS10430 394a8443ac2cd4ada56c61b69a7b470e 773 TIGRFAM TIGR03769 P_ac_wall_RPT: actinobacterial surface-anchored protein domain 707 749 1.5E-12 T 10-03-2017 IPR022435 Surface-anchored repeat, actinobacteria CpPa04_RS10430 394a8443ac2cd4ada56c61b69a7b470e 773 TIGRFAM TIGR03769 P_ac_wall_RPT: actinobacterial surface-anchored protein domain 180 220 1.8E-12 T 10-03-2017 IPR022435 Surface-anchored repeat, actinobacteria CpPa04_RS00545 e58ff17e8414aa54a024ff9e46d356bd 152 Pfam PF04138 GtrA-like protein 31 151 2.1E-16 T 10-03-2017 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 CpPa04_RS09390 77caef6b91cb4114237cc2778621c763 269 Pfam PF01578 Cytochrome C assembly protein 71 266 2.9E-43 T 10-03-2017 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CpPa04_RS09390 77caef6b91cb4114237cc2778621c763 269 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 45 269 9.5E-58 T 10-03-2017 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 CpPa04_RS06690 19322afac27996280bb953721c94d00c 101 Pfam PF10611 Protein of unknown function (DUF2469) 1 100 1.7E-48 T 10-03-2017 IPR019592 Protein of unknown function DUF2469 CpPa04_RS01090 88d4f3c228becc88903fb2eb2ca18b4a 166 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 36 148 4.1E-33 T 10-03-2017 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III CpPa04_RS01365 a72acf192d13d4ab3d249b0a5fe8339d 33 Pfam PF08213 Mitochondrial domain of unknown function (DUF1713) 1 33 4.5E-12 T 10-03-2017 IPR013177 Domain of unknown function DUF1713 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS01365 a72acf192d13d4ab3d249b0a5fe8339d 33 SMART SM01155 1 33 2.8E-8 T 10-03-2017 IPR013177 Domain of unknown function DUF1713 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CpPa04_RS00200 409653b92bbf78414967ee96c3ef3450 237 Pfam PF02517 CAAX protease self-immunity 144 228 7.4E-9 T 10-03-2017 IPR003675 CAAX amino terminal protease GO:0016020 CpPa04_RS01275 eee5354211695346221fe354df0fcfe2 282 Pfam PF11209 Protein of unknown function (DUF2993) 27 258 1.1E-12 T 10-03-2017 IPR021373 Protein of unknown function DUF2993 CpPa04_RS01260 0e240853ec87623419212741fec556ae 435 Pfam PF04286 Protein of unknown function (DUF445) 69 429 2.8E-99 T 10-03-2017 IPR007383 Protein of unknown function DUF445 CpPa04_RS06990 5757bd073fbf150d4e21867836f7c04d 294 TIGRFAM TIGR00688 rarD: protein RarD 2 249 8.5E-61 T 10-03-2017 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 CpPa04_RS06990 5757bd073fbf150d4e21867836f7c04d 294 Pfam PF00892 EamA-like transporter family 2 133 3.9E-9 T 10-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 CpPa04_RS06990 5757bd073fbf150d4e21867836f7c04d 294 Pfam PF00892 EamA-like transporter family 144 272 1.8E-6 T 10-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 CpPa04_RS06990 5757bd073fbf150d4e21867836f7c04d 294 SUPERFAMILY SSF103481 34 136 1.57E-9 T 10-03-2017 CpPa04_RS06990 5757bd073fbf150d4e21867836f7c04d 294 SUPERFAMILY SSF103481 195 272 1.57E-9 T 10-03-2017 CpPa04_RS09950 17f58b87eb1fa1e8aea9e407a3b9634f 341 SUPERFAMILY SSF53474 59 337 1.79E-23 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS09950 17f58b87eb1fa1e8aea9e407a3b9634f 341 Pfam PF00756 Putative esterase 67 328 1.1E-31 T 10-03-2017 IPR000801 Putative esterase Reactome: R-HSA-156590 CpPa04_RS09950 17f58b87eb1fa1e8aea9e407a3b9634f 341 Gene3D G3DSA:3.40.50.1820 58 334 8.0E-74 T 10-03-2017 IPR029058 Alpha/Beta hydrolase fold CpPa04_RS05770 d1db87085bb08515f38168d5808ddbe7 157 Pfam PF10722 Putative bacterial sensory transduction regulator 23 135 6.0E-9 T 10-03-2017 IPR019660 Putative sensory transduction regulator YbjN CpPa04_RS10510 06c4638f705c117114a78b09605f70b5 209 Pfam PF02517 CAAX protease self-immunity 106 196 2.1E-12 T 10-03-2017 IPR003675 CAAX amino terminal protease GO:0016020 CpPa04_RS04275 bcbffa3f8a77430952ae4abf01787752 384 Pfam PF00953 Glycosyl transferase family 4 92 254 1.9E-33 T 10-03-2017 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 CpPa04_RS06485 b05a3dceae76e3c8ee64d0b50f68f8f7 330 SUPERFAMILY SSF64182 28 300 7.59E-49 T 10-03-2017 CpPa04_RS06485 b05a3dceae76e3c8ee64d0b50f68f8f7 330 Pfam PF01368 DHH family 28 170 6.3E-12 T 10-03-2017 IPR001667 DDH domain CpPa04_RS06485 b05a3dceae76e3c8ee64d0b50f68f8f7 330 Gene3D G3DSA:3.90.1640.10 27 208 2.4E-25 T 10-03-2017 CpPa04_RS06485 b05a3dceae76e3c8ee64d0b50f68f8f7 330 Pfam PF02272 DHHA1 domain 267 308 1.7E-4 T 10-03-2017 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CpPa04_RS06120 a58d09db9e807492c127c0a0e4cee94a 267 Pfam PF12502 Protein of unknown function (DUF3710) 66 241 2.0E-50 T 10-03-2017 IPR022183 Protein of unknown function DUF3710 CpPa04_RS10340 8217bcd15c7f52a03d6ba2414882ae3c 511 Pfam PF09594 Protein of unknown function (DUF2029) 161 387 2.1E-13 T 10-03-2017 IPR018584 Glycosyltransferase family 87 GO:0016758 CpPa04_RS10340 8217bcd15c7f52a03d6ba2414882ae3c 511 PIRSF PIRSF010361 22 490 5.9E-166 T 10-03-2017 IPR016570 Uncharacterised conserved protein UCP010361, membrane CpPa04_RS04080 cb3f4b43a41ad09444d072b72b574b31 263 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 225 245 2.2E-7 T 10-03-2017 IPR024726 Ferric iron reductase, C-terminal GO:0051537 CpPa04_RS04180 7e7a9b1497c88b2b559de84890860d86 65 Pfam PF04024 PspC domain 8 64 1.9E-18 T 10-03-2017 IPR007168 Phage shock protein, PspC, N-terminal CpPa04_RS09575 9bb70e65b3b285ab60e0bb9665ef2a5a 182 Gene3D G3DSA:2.60.40.1280 18 166 7.3E-22 T 10-03-2017 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 CpPa04_RS09575 9bb70e65b3b285ab60e0bb9665ef2a5a 182 SUPERFAMILY SSF49401 20 115 1.37E-15 T 10-03-2017 IPR008966 Adhesion domain CpPa04_RS07135 dde41cecef6a42d834766934b8b38720 131 Pfam PF11239 Protein of unknown function (DUF3040) 2 86 6.6E-23 T 10-03-2017 IPR021401 Protein of unknown function DUF3040 CpPa04_RS03070 2f29a23e800364fbfbadec9576a4a439 361 Pfam PF11268 Protein of unknown function (DUF3071) 1 227 1.1E-59 T 10-03-2017 IPR021421 Protein of unknown function DUF3071 CpPa04_RS03675 fad00db34e6fea3153e97bc0c8a85d7e 150 Pfam PF14155 Domain of unknown function (DUF4307) 30 139 2.1E-31 T 10-03-2017 IPR025443 Protein of unknown function DUF4307 CpPa04_RS00625 13624b9012b80942d9e8fb10751b5423 524 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 73 514 4.9E-92 T 10-03-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CpPa04_RS00625 13624b9012b80942d9e8fb10751b5423 524 Pfam PF00939 Sodium:sulfate symporter transmembrane region 72 514 5.2E-79 T 10-03-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CpPa04_RS06015 5f7f375d949aefac6aa6d75441bd125c 229 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 91 2.3E-10 T 10-03-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CpPa04_RS06015 5f7f375d949aefac6aa6d75441bd125c 229 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 69 91 - T 10-03-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CpPa04_RS03985 1c4849f84fe74cf38c6b37d34ab2d82e 55 Pfam PF11314 Protein of unknown function (DUF3117) 4 53 5.7E-29 T 10-03-2017 IPR021465 Protein of unknown function DUF3117 CpPa04_RS03785 a52b34c810be345fc4f575271406c170 524 Pfam PF01594 Domain of unknown function DUF20 115 437 1.7E-54 T 10-03-2017 IPR002549 Transmembrane protein TqsA-like CpPa04_RS08440 69dd6be08dd4445fd431e13bd3675041 167 SUPERFAMILY SSF46689 15 71 2.69E-6 T 10-03-2017 IPR009057 Homeodomain-like GO:0003677 CpPa04_RS08440 69dd6be08dd4445fd431e13bd3675041 167 Pfam PF13551 Winged helix-turn helix 16 58 3.1E-8 T 10-03-2017 CpPa04_RS05580 1dff52313b5bb87588eaa22120c7b0ee 331 Pfam PF02628 Cytochrome oxidase assembly protein 27 297 1.5E-12 T 10-03-2017 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 CpPa04_RS01945 67e6a01b9c228169041d5f037904d2aa 265 Gene3D G3DSA:1.20.1080.10 25 258 6.6E-50 T 10-03-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CpPa04_RS01945 67e6a01b9c228169041d5f037904d2aa 265 Pfam PF01226 Formate/nitrite transporter 9 255 1.4E-44 T 10-03-2017 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 CpPa04_RS05870 1ef5521352069001a513842113bd3526 270 SUPERFAMILY SSF52540 131 223 1.07E-5 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS05870 1ef5521352069001a513842113bd3526 270 SUPERFAMILY SSF52540 53 70 1.07E-5 T 10-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CpPa04_RS00980 5822514102c88516615e7440307d55ed 151 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 3 89 7.0E-21 T 10-03-2017 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 CpPa04_RS09585 1b56b911b449cff14124314479f3e258 204 PRINTS PR01217 Proline rich extensin signature 70 87 5.7E-10 T 10-03-2017 CpPa04_RS09585 1b56b911b449cff14124314479f3e258 204 PRINTS PR01217 Proline rich extensin signature 91 116 5.7E-10 T 10-03-2017 CpPa04_RS09585 1b56b911b449cff14124314479f3e258 204 PRINTS PR01217 Proline rich extensin signature 15 27 5.7E-10 T 10-03-2017 CpPa04_RS09585 1b56b911b449cff14124314479f3e258 204 PRINTS PR01217 Proline rich extensin signature 50 66 5.7E-10 T 10-03-2017 CpPa04_RS09585 1b56b911b449cff14124314479f3e258 204 PRINTS PR01217 Proline rich extensin signature 27 48 5.7E-10 T 10-03-2017 CpPa04_RS04940 8076571e872e609f60c2baa9ede44a09 272 Pfam PF02616 Segregation and condensation protein ScpA 33 257 1.4E-56 T 10-03-2017 IPR003768 Segregation and condensation protein A CpPa04_RS08845 bfddcef60337052ae3bcc2a029c80080 444 Pfam PF02386 Cation transport protein 33 424 2.1E-63 T 10-03-2017 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 CpPa04_RS08845 bfddcef60337052ae3bcc2a029c80080 444 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 23 415 1.5E-105 T 10-03-2017 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 CpPa04_RS02165 b83f35111eb6fd8a7f236bcaf919d52a 137 ProDom PD032647 MB3446 ML0386 RV3412/MT3521 CGL0602 11 133 1.0E-48 T 10-03-2017 CpPa04_RS03130 089e6ea988ef7e06f0e96228d9b55fe1 424 Pfam PF00999 Sodium/hydrogen exchanger family 28 401 4.6E-40 T 10-03-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CpPa04_RS02730 68dcafe357fc072d239aaaf434ca2cea 296 Pfam PF11350 Protein of unknown function (DUF3152) 86 294 1.5E-100 T 10-03-2017 IPR022603 Domain of unknown function DUF3152 CpPa04_RS02730 68dcafe357fc072d239aaaf434ca2cea 296 SUPERFAMILY SSF55486 86 263 1.27E-20 T 10-03-2017 CpPa04_RS09715 1fcd495c82cf0e7f7a7ffa5231273b20 218 Pfam PF08044 Domain of unknown function (DUF1707) 10 61 1.1E-18 T 10-03-2017 IPR012551 Protein of unknown function DUF1707 CpPa04_RS09050 525382957f98f10c77f8353867b1431f 220 Pfam PF02517 CAAX protease self-immunity 120 208 2.1E-10 T 10-03-2017 IPR003675 CAAX amino terminal protease GO:0016020 CpPa04_RS03420 f524e37f3c6ee1158b60b18ae30947dc 227 Pfam PF13490 Putative zinc-finger 4 38 1.0E-9 T 10-03-2017 IPR027383 Putative zinc-finger CpPa04_RS09270 06e72af9f70038332ed2d296c83714c5 183 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 90 179 2.4E-12 T 10-03-2017 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain CpPa04_RS06335 5b9f0d2902e075e390fc8eb0c1d685cb 450 Pfam PF03993 Domain of Unknown Function (DUF349) 291 365 1.8E-20 T 10-03-2017 IPR007139 Protein of unknown function DUF349 CpPa04_RS06335 5b9f0d2902e075e390fc8eb0c1d685cb 450 Pfam PF03993 Domain of Unknown Function (DUF349) 214 287 1.1E-20 T 10-03-2017 IPR007139 Protein of unknown function DUF349 CpPa04_RS06335 5b9f0d2902e075e390fc8eb0c1d685cb 450 Pfam PF03993 Domain of Unknown Function (DUF349) 137 210 3.4E-13 T 10-03-2017 IPR007139 Protein of unknown function DUF349 CpPa04_RS06925 5438b2502fbf4eb2bfa7d41a7bb5f6b4 401 Pfam PF10722 Putative bacterial sensory transduction regulator 315 377 8.3E-10 T 10-03-2017 IPR019660 Putative sensory transduction regulator YbjN CpPa04_RS09105 037bb36432ca2f13c9c25c1130ca6fed 148 Pfam PF11377 Protein of unknown function (DUF3180) 9 143 8.5E-37 T 10-03-2017 IPR021517 Protein of unknown function DUF3180 CpPa04_RS10065 e5dad4dee555631381994abc04a96e8f 253 Pfam PF02517 CAAX protease self-immunity 145 235 2.8E-11 T 10-03-2017 IPR003675 CAAX amino terminal protease GO:0016020 CpPa04_RS02735 00889301478e8f2843e5ff87f64aefff 279 TIGRFAM TIGR02569 TIGR02569_actnb: TIGR02569 family protein 6 271 1.3E-116 T 10-03-2017 IPR013402 Conserved hypothetical protein CHP02569 CpPa04_RS03630 f9db33fb64902297c315284eb82c4ce1 180 Pfam PF04977 Septum formation initiator 40 114 1.2E-16 T 10-03-2017 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 CpPa04_RS03055 9a867d9da04bf6c511d03b928ed99640 492 Pfam PF00860 Permease family 39 445 4.9E-28 T 10-03-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CpPa04_RS02310 c307f96dc6405a63457450cf97b728fc 615 Pfam PF04213 Htaa 354 507 5.8E-46 T 10-03-2017 IPR007331 Htaa CpPa04_RS02310 c307f96dc6405a63457450cf97b728fc 615 Pfam PF04213 Htaa 37 207 1.1E-33 T 10-03-2017 IPR007331 Htaa CpPa04_RS02190 1fe0ea2e2254437545ce1315315abc34 149 Pfam PF15583 Immunity protein 68 2 147 2.9E-56 T 10-03-2017 IPR028276 Immunity protein 68 CpPa04_RS06200 db21df38a6670e56369d202f3e13a164 355 Pfam PF13830 Domain of unknown function (DUF4192) 7 323 5.7E-55 T 10-03-2017 IPR025447 Protein of unknown function DUF4192 CpPa04_RS01265 e3a487184487f838ef436a039deb6186 96 Pfam PF10724 Protein of unknown function (DUF2516) 8 92 1.7E-21 T 10-03-2017 IPR019662 Protein of unknown function DUF2516 CpPa04_RS05260 6e3e4fd06c926f7acffb9bb1e2ff6769 329 Pfam PF13280 WYL domain 157 324 1.0E-20 T 10-03-2017 IPR026881 WYL domain CpPa04_RS10040 bf4577c0ac586ee3b1962fdd095fbeed 338 Pfam PF13845 Septum formation 62 285 8.2E-82 T 10-03-2017 IPR026004 Septum formation-related domain CpPa04_RS09425 aad47ecd18a3d0939bc7a88f1bfa01cc 366 Pfam PF13515 Fusaric acid resistance protein-like 31 150 1.1E-12 T 10-03-2017 CpPa04_RS05730 3a36f0c1924057889a0855320e273e1f 107 Gene3D G3DSA:1.10.8.50 50 99 1.9E-6 T 10-03-2017 CpPa04_RS08220 c4b53dd207f7c872c5379881156f03d0 483 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 131 442 5.4E-44 T 10-03-2017 IPR003776 YcaO-like domain CpPa04_RS09945 5f10e7670b99d9f685ac8076e8415d9e 473 Pfam PF09594 Protein of unknown function (DUF2029) 124 358 1.8E-17 T 10-03-2017 IPR018584 Glycosyltransferase family 87 GO:0016758 CpPa04_RS05050 41520a341e47642ad1ee95de12fee355 88 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 3 58 8.1E-5 T 10-03-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CpPa04_RS01375 b5819f9191714922610fe67cf643875f 274 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 9 212 1.1E-15 T 10-03-2017 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CpPa04_RS02450 02e65bcb501321a2465c0e0c27de9be7 328 SUPERFAMILY SSF56059 176 318 4.0E-21 T 10-03-2017 CpPa04_RS02450 02e65bcb501321a2465c0e0c27de9be7 328 SUPERFAMILY SSF56059 83 141 4.0E-21 T 10-03-2017 CpPa04_RS03730 f7bccd0bd96186b562044e47ad0eea63 213 Pfam PF08310 LGFP repeat 173 211 4.1E-5 T 10-03-2017 IPR013207 LGFP