locus-tag class description CpPA07_RS00005 PF00308 Bacterial dnaA protein CpPA07_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CpPA07_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CpPA07_RS00010 PF02767 DNA polymerase III beta subunit, central domain CpPA07_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CpPA07_RS00015 PF02463 RecF/RecN/SMC N terminal domain CpPA07_RS00020 PF05258 Dna[CI] antecedent, DciA CpPA07_RS00025 PF00204 DNA gyrase B CpPA07_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus CpPA07_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CpPA07_RS00025 PF01751 Toprim domain CpPA07_RS00045 PF03989 DNA gyrase C-terminal domain, beta-propeller CpPA07_RS00045 PF00521 DNA gyrase/topoisomerase IV, subunit A CpPA07_RS00090 PF02653 Branched-chain amino acid transport system / permease component CpPA07_RS00095 PF00005 ABC transporter CpPA07_RS00105 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CpPA07_RS00135 PF00005 ABC transporter CpPA07_RS00140 PF01032 FecCD transport family CpPA07_RS00145 PF01032 FecCD transport family CpPA07_RS00150 PF01497 Periplasmic binding protein CpPA07_RS00155 PF06781 Cell division protein CrgA CpPA07_RS00160 PF00069 Protein kinase domain CpPA07_RS00160 PF03793 PASTA domain CpPA07_RS00165 PF00069 Protein kinase domain CpPA07_RS00170 PF00905 Penicillin binding protein transpeptidase domain CpPA07_RS00175 PF01098 Cell cycle protein CpPA07_RS00190 PF00498 FHA domain CpPA07_RS00190 PF00498 FHA domain CpPA07_RS00190 PF12401 Protein of unknown function (DUF2662) CpPA07_RS00190 PF12401 Protein of unknown function (DUF2662) CpPA07_RS00220 PF00005 ABC transporter CpPA07_RS00225 PF01032 FecCD transport family CpPA07_RS00230 PF00571 CBS domain CpPA07_RS00230 PF01769 Divalent cation transporter CpPA07_RS00230 PF03448 MgtE intracellular N domain CpPA07_RS00235 PF16657 Maltogenic Amylase, C-terminal domain CpPA07_RS00235 PF00128 Alpha amylase, catalytic domain CpPA07_RS00260 PF04545 Sigma-70, region 4 CpPA07_RS00260 PF04542 Sigma-70 region 2 CpPA07_RS00270 PF00578 AhpC/TSA family CpPA07_RS00270 PF02683 Cytochrome C biogenesis protein transmembrane region CpPA07_RS00270 PF17991 Thioredoxin like C-terminal domain CpPA07_RS00280 PF00528 Binding-protein-dependent transport system inner membrane component CpPA07_RS00285 PF00528 Binding-protein-dependent transport system inner membrane component CpPA07_RS00290 PF00005 ABC transporter CpPA07_RS00290 PF00571 CBS domain CpPA07_RS00295 PF14013 MT0933-like antitoxin protein CpPA07_RS00300 PF07687 Peptidase dimerisation domain CpPA07_RS00300 PF01546 Peptidase family M20/M25/M40 CpPA07_RS00305 PF04055 Radical SAM superfamily CpPA07_RS00305 PF06968 Biotin and Thiamin Synthesis associated domain CpPA07_RS00320 PF01048 Phosphorylase superfamily CpPA07_RS00320 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CpPA07_RS00330 PF01183 Glycosyl hydrolases family 25 CpPA07_RS00330 PF01471 Putative peptidoglycan binding domain CpPA07_RS00355 PF00132 Bacterial transferase hexapeptide (six repeats) CpPA07_RS00370 PF03641 Possible lysine decarboxylase CpPA07_RS00380 PF01047 MarR family CpPA07_RS00395 PF05145 Transition state regulatory protein AbrB CpPA07_RS00405 PF01925 Sulfite exporter TauE/SafE CpPA07_RS00410 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CpPA07_RS00420 PF00271 Helicase conserved C-terminal domain CpPA07_RS00420 PF00270 DEAD/DEAH box helicase CpPA07_RS00420 PF04408 Helicase associated domain (HA2) CpPA07_RS00420 PF08482 ATP-dependent helicase C-terminal CpPA07_RS00425 PF13532 2OG-Fe(II) oxygenase superfamily CpPA07_RS00430 PF03352 Methyladenine glycosylase CpPA07_RS00430 PF13673 Acetyltransferase (GNAT) domain CpPA07_RS00430 PF13302 Acetyltransferase (GNAT) domain CpPA07_RS00430 PF00117 Glutamine amidotransferase class-I CpPA07_RS00430 PF00958 GMP synthase C terminal domain CpPA07_RS00435 PF00106 short chain dehydrogenase CpPA07_RS00440 PF01906 Putative heavy-metal-binding CpPA07_RS00470 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CpPA07_RS00470 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CpPA07_RS00475 PF00230 Major intrinsic protein CpPA07_RS00485 PF01431 Peptidase family M13 CpPA07_RS00485 PF05649 Peptidase family M13 CpPA07_RS00505 PF14896 EmbC C-terminal domain CpPA07_RS00505 PF17689 Arabinosyltransferase concanavalin like domain CpPA07_RS00505 PF04602 Mycobacterial cell wall arabinan synthesis protein CpPA07_RS00510 PF12249 Arabinofuranosyltransferase A C terminal CpPA07_RS00510 PF12250 Arabinofuranosyltransferase N terminal CpPA07_RS00515 PF00106 short chain dehydrogenase CpPA07_RS00520 PF04030 D-arabinono-1,4-lactone oxidase CpPA07_RS00520 PF01565 FAD binding domain CpPA07_RS00545 PF04138 GtrA-like protein CpPA07_RS00560 PF00005 ABC transporter CpPA07_RS00565 PF00950 ABC 3 transport family CpPA07_RS00570 PF00950 ABC 3 transport family CpPA07_RS00575 PF01297 Zinc-uptake complex component A periplasmic CpPA07_RS00585 PF00005 ABC transporter CpPA07_RS00590 PF01061 ABC-2 type transporter CpPA07_RS00595 PF00266 Aminotransferase class-V CpPA07_RS00600 PF08240 Alcohol dehydrogenase GroES-like domain CpPA07_RS00600 PF00107 Zinc-binding dehydrogenase CpPA07_RS00610 PF00155 Aminotransferase class I and II CpPA07_RS00625 PF00939 Sodium:sulfate symporter transmembrane region CpPA07_RS00635 PF00874 PRD domain CpPA07_RS00635 PF03123 CAT RNA binding domain CpPA07_RS00640 PF00367 phosphotransferase system, EIIB CpPA07_RS00640 PF02378 Phosphotransferase system, EIIC CpPA07_RS00645 PF02378 Phosphotransferase system, EIIC CpPA07_RS00645 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CpPA07_RS00645 PF00367 phosphotransferase system, EIIB CpPA07_RS00655 PF00115 Cytochrome C and Quinol oxidase polypeptide I CpPA07_RS00670 PF00392 Bacterial regulatory proteins, gntR family CpPA07_RS00675 PF01680 SOR/SNZ family CpPA07_RS00680 PF01174 SNO glutamine amidotransferase family CpPA07_RS00685 PF02153 Prephenate dehydrogenase CpPA07_RS00695 PF14437 MafB19-like deaminase CpPA07_RS00705 PF03176 MMPL family CpPA07_RS00710 PF01702 Queuine tRNA-ribosyltransferase CpPA07_RS00715 PF00749 tRNA synthetases class I (E and Q), catalytic domain CpPA07_RS00720 PF02447 GntP family permease CpPA07_RS00725 PF01202 Shikimate kinase CpPA07_RS00730 PF00107 Zinc-binding dehydrogenase CpPA07_RS00730 PF08240 Alcohol dehydrogenase GroES-like domain CpPA07_RS00750 PF12897 Alanine-glyoxylate amino-transferase CpPA07_RS00760 PF12169 DNA polymerase III subunits gamma and tau domain III CpPA07_RS00765 PF02575 YbaB/EbfC DNA-binding family CpPA07_RS00770 PF13662 Toprim domain CpPA07_RS00770 PF02132 RecR protein CpPA07_RS00775 PF02447 GntP family permease CpPA07_RS00780 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CpPA07_RS00780 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CpPA07_RS00790 PF07729 FCD domain CpPA07_RS00790 PF00392 Bacterial regulatory proteins, gntR family CpPA07_RS00795 PF01557 Fumarylacetoacetate (FAA) hydrolase family CpPA07_RS00805 PF07685 CobB/CobQ-like glutamine amidotransferase domain CpPA07_RS00810 PF08245 Mur ligase middle domain CpPA07_RS00810 PF02875 Mur ligase family, glutamate ligase domain CpPA07_RS00820 PF00881 Nitroreductase family CpPA07_RS00825 PF08502 LeuA allosteric (dimerisation) domain CpPA07_RS00825 PF00682 HMGL-like CpPA07_RS00830 PF04198 Putative sugar-binding domain CpPA07_RS00835 PF01048 Phosphorylase superfamily CpPA07_RS00840 PF07690 Major Facilitator Superfamily CpPA07_RS00845 PF01791 DeoC/LacD family aldolase CpPA07_RS00850 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CpPA07_RS00850 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CpPA07_RS00850 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CpPA07_RS00850 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CpPA07_RS00860 PF08341 Thioester domain CpPA07_RS00860 PF17802 Prealbumin-like fold domain CpPA07_RS00865 PF17961 Bacterial Ig domain CpPA07_RS00865 PF00746 LPXTG cell wall anchor motif CpPA07_RS00865 PF17210 SdrD B-like domain CpPA07_RS00865 PF04650 YSIRK type signal peptide CpPA07_RS00880 PF01842 ACT domain CpPA07_RS00880 PF13840 ACT domain CpPA07_RS00880 PF00696 Amino acid kinase family CpPA07_RS00885 PF17961 Bacterial Ig domain CpPA07_RS00885 PF00746 LPXTG cell wall anchor motif CpPA07_RS00885 PF17210 SdrD B-like domain CpPA07_RS00885 PF04650 YSIRK type signal peptide CpPA07_RS00885 PF10425 C-terminus of bacterial fibrinogen-binding adhesin CpPA07_RS00890 PF02774 Semialdehyde dehydrogenase, dimerisation domain CpPA07_RS00890 PF01118 Semialdehyde dehydrogenase, NAD binding domain CpPA07_RS00895 PF04542 Sigma-70 region 2 CpPA07_RS00895 PF08281 Sigma-70, region 4 CpPA07_RS00900 PF00199 Catalase CpPA07_RS00900 PF06628 Catalase-related immune-responsive CpPA07_RS00930 PF00005 ABC transporter CpPA07_RS00930 PF17845 FbpC C-terminal regulatory nucleotide binding domain CpPA07_RS00950 PF00072 Response regulator receiver domain CpPA07_RS00950 PF00486 Transcriptional regulatory protein, C terminal CpPA07_RS00975 PF00361 Proton-conducting membrane transporter CpPA07_RS00980 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CpPA07_RS00985 PF13244 Domain of unknown function (DUF4040) CpPA07_RS00985 PF00361 Proton-conducting membrane transporter CpPA07_RS00985 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CpPA07_RS00985 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CpPA07_RS00995 PF13810 Domain of unknown function (DUF4185) CpPA07_RS01005 PF13732 Domain of unknown function (DUF4162) CpPA07_RS01005 PF00005 ABC transporter CpPA07_RS01035 PF00905 Penicillin binding protein transpeptidase domain CpPA07_RS01035 PF00912 Transglycosylase CpPA07_RS01040 PF02467 Transcription factor WhiB CpPA07_RS01060 PF00027 Cyclic nucleotide-binding domain CpPA07_RS01060 PF13545 Crp-like helix-turn-helix domain CpPA07_RS01070 PF10576 Iron-sulfur binding domain of endonuclease III CpPA07_RS01070 PF00633 Helix-hairpin-helix motif CpPA07_RS01070 PF00730 HhH-GPD superfamily base excision DNA repair protein CpPA07_RS01080 PF00293 NUDIX domain CpPA07_RS01085 PF02674 Colicin V production protein CpPA07_RS01120 PF00437 Type II/IV secretion system protein CpPA07_RS01150 PF00270 DEAD/DEAH box helicase CpPA07_RS01150 PF09369 Domain of unknown function (DUF1998) CpPA07_RS01150 PF00271 Helicase conserved C-terminal domain CpPA07_RS01155 PF00313 'Cold-shock' DNA-binding domain CpPA07_RS01160 PF01131 DNA topoisomerase CpPA07_RS01160 PF01751 Toprim domain CpPA07_RS01160 PF13368 Topoisomerase C-terminal repeat CpPA07_RS01165 PF03169 OPT oligopeptide transporter protein CpPA07_RS01170 PF00211 Adenylate and Guanylate cyclase catalytic domain CpPA07_RS01170 PF00672 HAMP domain CpPA07_RS01175 PF09115 DNA polymerase III, delta subunit, C terminal CpPA07_RS01190 PF13193 AMP-binding enzyme C-terminal domain CpPA07_RS01190 PF00501 AMP-binding enzyme CpPA07_RS01200 PF00483 Nucleotidyl transferase CpPA07_RS01205 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CpPA07_RS01210 PF16363 GDP-mannose 4,6 dehydratase CpPA07_RS01220 PF00326 Prolyl oligopeptidase family CpPA07_RS01220 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CpPA07_RS01235 PF07992 Pyridine nucleotide-disulphide oxidoreductase CpPA07_RS01235 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CpPA07_RS01240 PF01381 Helix-turn-helix CpPA07_RS01240 PF06114 IrrE N-terminal-like domain CpPA07_RS01240 PF09856 Predicted transcriptional regulator (DUF2083) CpPA07_RS01250 PF00890 FAD binding domain CpPA07_RS01250 PF02910 Fumarate reductase flavoprotein C-term CpPA07_RS01255 PF13085 2Fe-2S iron-sulfur cluster binding domain CpPA07_RS01255 PF13183 4Fe-4S dicluster domain CpPA07_RS01265 PF04286 Protein of unknown function (DUF445) CpPA07_RS01275 PF01791 DeoC/LacD family aldolase CpPA07_RS01285 PF04055 Radical SAM superfamily CpPA07_RS01290 PF02901 Pyruvate formate lyase-like CpPA07_RS01290 PF01228 Glycine radical CpPA07_RS01295 PF02901 Pyruvate formate lyase-like CpPA07_RS01295 PF01228 Glycine radical CpPA07_RS01310 PF01565 FAD binding domain CpPA07_RS01310 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CpPA07_RS01315 PF00501 AMP-binding enzyme CpPA07_RS01315 PF13193 AMP-binding enzyme C-terminal domain CpPA07_RS01320 PF00534 Glycosyl transferases group 1 CpPA07_RS01320 PF13439 Glycosyltransferase Family 4 CpPA07_RS01325 PF00300 Histidine phosphatase superfamily (branch 1) CpPA07_RS01330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CpPA07_RS01330 PF00512 His Kinase A (phospho-acceptor) domain CpPA07_RS01335 PF00072 Response regulator receiver domain CpPA07_RS01335 PF00486 Transcriptional regulatory protein, C terminal CpPA07_RS01345 PF02541 Ppx/GppA phosphatase family CpPA07_RS01355 PF14748 Pyrroline-5-carboxylate reductase dimerisation CpPA07_RS01355 PF03807 NADP oxidoreductase coenzyme F420-dependent CpPA07_RS01365 PF12728 Helix-turn-helix domain CpPA07_RS01370 PF08213 Mitochondrial domain of unknown function (DUF1713) CpPA07_RS01375 PF06965 Na+/H+ antiporter 1 CpPA07_RS01375 PF13462 Thioredoxin CpPA07_RS01390 PF05768 Glutaredoxin-like domain (DUF836) CpPA07_RS01395 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CpPA07_RS01395 PF01488 Shikimate / quinate 5-dehydrogenase CpPA07_RS01395 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CpPA07_RS01400 PF03900 Porphobilinogen deaminase, C-terminal domain CpPA07_RS01400 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CpPA07_RS01405 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CpPA07_RS01405 PF14824 Sirohaem biosynthesis protein central CpPA07_RS01405 PF10414 Sirohaem synthase dimerisation region CpPA07_RS01410 PF00490 Delta-aminolevulinic acid dehydratase CpPA07_RS01420 PF00403 Heavy-metal-associated domain CpPA07_RS01425 PF01208 Uroporphyrinogen decarboxylase (URO-D) CpPA07_RS01430 PF01593 Flavin containing amine oxidoreductase CpPA07_RS01440 PF00202 Aminotransferase class-III CpPA07_RS01445 PF00300 Histidine phosphatase superfamily (branch 1) CpPA07_RS01455 PF02683 Cytochrome C biogenesis protein transmembrane region CpPA07_RS01460 PF05140 ResB-like family CpPA07_RS01465 PF01795 MraW methylase family CpPA07_RS01470 PF00005 ABC transporter CpPA07_RS01480 PF01032 FecCD transport family CpPA07_RS01485 PF01578 Cytochrome C assembly protein CpPA07_RS01500 PF01040 UbiA prenyltransferase family CpPA07_RS01505 PF00501 AMP-binding enzyme CpPA07_RS01505 PF13193 AMP-binding enzyme C-terminal domain CpPA07_RS01510 PF00378 Enoyl-CoA hydratase/isomerase CpPA07_RS01515 PF03606 C4-dicarboxylate anaerobic carrier CpPA07_RS01520 PF13378 Enolase C-terminal domain-like CpPA07_RS01520 PF18374 Enolase N-terminal domain-like CpPA07_RS01525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CpPA07_RS01540 PF01209 ubiE/COQ5 methyltransferase family CpPA07_RS01545 PF00056 lactate/malate dehydrogenase, NAD binding domain CpPA07_RS01545 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CpPA07_RS01550 PF01494 FAD binding domain CpPA07_RS01555 PF00348 Polyprenyl synthetase CpPA07_RS01580 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CpPA07_RS01585 PF02357 Transcription termination factor nusG CpPA07_RS01590 PF03946 Ribosomal protein L11, N-terminal domain CpPA07_RS01590 PF00298 Ribosomal protein L11, RNA binding domain CpPA07_RS01595 PF00687 Ribosomal protein L1p/L10e family CpPA07_RS01610 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CpPA07_RS01615 PF00466 Ribosomal protein L10 CpPA07_RS01620 PF16320 Ribosomal protein L7/L12 dimerisation domain CpPA07_RS01620 PF00542 Ribosomal protein L7/L12 C-terminal domain CpPA07_RS01630 PF01297 Zinc-uptake complex component A periplasmic CpPA07_RS01640 PF00005 ABC transporter CpPA07_RS01645 PF00950 ABC 3 transport family CpPA07_RS01660 PF00562 RNA polymerase Rpb2, domain 6 CpPA07_RS01660 PF04561 RNA polymerase Rpb2, domain 2 CpPA07_RS01660 PF04560 RNA polymerase Rpb2, domain 7 CpPA07_RS01660 PF10385 RNA polymerase beta subunit external 1 domain CpPA07_RS01660 PF04565 RNA polymerase Rpb2, domain 3 CpPA07_RS01660 PF04563 RNA polymerase beta subunit CpPA07_RS01665 PF04983 RNA polymerase Rpb1, domain 3 CpPA07_RS01665 PF04997 RNA polymerase Rpb1, domain 1 CpPA07_RS01665 PF04998 RNA polymerase Rpb1, domain 5 CpPA07_RS01665 PF00623 RNA polymerase Rpb1, domain 2 CpPA07_RS01670 PF05231 MASE1 CpPA07_RS01670 PF07730 Histidine kinase CpPA07_RS01670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CpPA07_RS01675 PF00072 Response regulator receiver domain CpPA07_RS01675 PF00196 Bacterial regulatory proteins, luxR family CpPA07_RS01685 PF00005 ABC transporter CpPA07_RS01700 PF03773 Predicted permease CpPA07_RS01705 PF04055 Radical SAM superfamily CpPA07_RS01720 PF00164 Ribosomal protein S12/S23 CpPA07_RS01725 PF00177 Ribosomal protein S7p/S5e CpPA07_RS01730 PF00679 Elongation factor G C-terminus CpPA07_RS01730 PF00009 Elongation factor Tu GTP binding domain CpPA07_RS01730 PF03144 Elongation factor Tu domain 2 CpPA07_RS01730 PF14492 Elongation Factor G, domain II CpPA07_RS01730 PF03764 Elongation factor G, domain IV CpPA07_RS01735 PF03143 Elongation factor Tu C-terminal domain CpPA07_RS01735 PF03144 Elongation factor Tu domain 2 CpPA07_RS01735 PF00009 Elongation factor Tu GTP binding domain CpPA07_RS01770 PF03780 Asp23 family, cell envelope-related function CpPA07_RS01780 PF00338 Ribosomal protein S10p/S20e CpPA07_RS01785 PF00297 Ribosomal protein L3 CpPA07_RS01790 PF00573 Ribosomal protein L4/L1 family CpPA07_RS01795 PF00276 Ribosomal protein L23 CpPA07_RS01800 PF00181 Ribosomal Proteins L2, RNA binding domain CpPA07_RS01800 PF03947 Ribosomal Proteins L2, C-terminal domain CpPA07_RS01805 PF00203 Ribosomal protein S19 CpPA07_RS01810 PF00237 Ribosomal protein L22p/L17e CpPA07_RS01815 PF07650 KH domain CpPA07_RS01815 PF00189 Ribosomal protein S3, C-terminal domain CpPA07_RS01820 PF00252 Ribosomal protein L16p/L10e CpPA07_RS01825 PF00831 Ribosomal L29 protein CpPA07_RS01830 PF00366 Ribosomal protein S17 CpPA07_RS01840 PF00005 ABC transporter CpPA07_RS01840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CpPA07_RS01845 PF00528 Binding-protein-dependent transport system inner membrane component CpPA07_RS01845 PF12911 N-terminal TM domain of oligopeptide transport permease C CpPA07_RS01850 PF00528 Binding-protein-dependent transport system inner membrane component CpPA07_RS01855 PF00238 Ribosomal protein L14p/L23e CpPA07_RS01860 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CpPA07_RS01860 PF00467 KOW motif CpPA07_RS01865 PF00673 ribosomal L5P family C-terminus CpPA07_RS01865 PF00281 Ribosomal protein L5 CpPA07_RS01875 PF03313 Serine dehydratase alpha chain CpPA07_RS01875 PF03315 Serine dehydratase beta chain CpPA07_RS01880 PF17763 Glutaminase/Asparaginase C-terminal domain CpPA07_RS01880 PF00710 Asparaginase, N-terminal CpPA07_RS01885 PF01569 PAP2 superfamily CpPA07_RS01890 PF00410 Ribosomal protein S8 CpPA07_RS01895 PF00347 Ribosomal protein L6 CpPA07_RS01900 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CpPA07_RS01905 PF03719 Ribosomal protein S5, C-terminal domain CpPA07_RS01905 PF00333 Ribosomal protein S5, N-terminal domain CpPA07_RS01910 PF00327 Ribosomal protein L30p/L7e CpPA07_RS01915 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CpPA07_RS01935 PF00528 Binding-protein-dependent transport system inner membrane component CpPA07_RS01940 PF00528 Binding-protein-dependent transport system inner membrane component CpPA07_RS01960 PF00005 ABC transporter CpPA07_RS01960 PF17912 MalK OB fold domain CpPA07_RS01965 PF00344 SecY translocase CpPA07_RS01980 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase CpPA07_RS01980 PF13088 BNR repeat-like domain CpPA07_RS01980 PF00754 F5/8 type C domain CpPA07_RS01995 PF01176 Translation initiation factor 1A / IF-1 CpPA07_RS02000 PF00416 Ribosomal protein S13/S18 CpPA07_RS02005 PF00411 Ribosomal protein S11 CpPA07_RS02010 PF00163 Ribosomal protein S4/S9 N-terminal domain CpPA07_RS02010 PF01479 S4 domain CpPA07_RS02015 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CpPA07_RS02015 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CpPA07_RS02015 PF01000 RNA polymerase Rpb3/RpoA insert domain CpPA07_RS02020 PF01196 Ribosomal protein L17 CpPA07_RS02025 PF01416 tRNA pseudouridine synthase CpPA07_RS02030 PF05108 Type VII secretion system ESX-1, transport TM domain B CpPA07_RS02040 PF00082 Subtilase family CpPA07_RS02060 PF06013 Proteins of 100 residues with WXG CpPA07_RS02065 PF06013 Proteins of 100 residues with WXG CpPA07_RS02070 PF00572 Ribosomal protein L13 CpPA07_RS02075 PF00380 Ribosomal protein S9/S16 CpPA07_RS02085 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CpPA07_RS02085 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CpPA07_RS02085 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CpPA07_RS02085 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CpPA07_RS02110 PF00842 Alanine racemase, C-terminal domain CpPA07_RS02110 PF01168 Alanine racemase, N-terminal domain CpPA07_RS02115 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CpPA07_RS02120 PF06826 Predicted Permease Membrane Region CpPA07_RS02120 PF02080 TrkA-C domain CpPA07_RS02130 PF00814 Glycoprotease family CpPA07_RS02140 PF00814 Glycoprotease family CpPA07_RS02145 PF00166 Chaperonin 10 Kd subunit CpPA07_RS02150 PF00118 TCP-1/cpn60 chaperonin family CpPA07_RS02155 PF02467 Transcription factor WhiB CpPA07_RS02160 PF04542 Sigma-70 region 2 CpPA07_RS02160 PF08281 Sigma-70, region 4 CpPA07_RS02175 PF00571 CBS domain CpPA07_RS02175 PF00478 IMP dehydrogenase / GMP reductase domain CpPA07_RS02180 PF00478 IMP dehydrogenase / GMP reductase domain CpPA07_RS02190 PF02540 NAD synthase CpPA07_RS02190 PF00958 GMP synthase C terminal domain CpPA07_RS02190 PF00117 Glutamine amidotransferase class-I CpPA07_RS02210 PF00072 Response regulator receiver domain CpPA07_RS02210 PF00196 Bacterial regulatory proteins, luxR family CpPA07_RS02225 PF00528 Binding-protein-dependent transport system inner membrane component CpPA07_RS02230 PF00005 ABC transporter CpPA07_RS02230 PF09383 NIL domain CpPA07_RS02235 PF03180 NLPA lipoprotein CpPA07_RS02240 PF03180 NLPA lipoprotein CpPA07_RS02260 PF01297 Zinc-uptake complex component A periplasmic CpPA07_RS02265 PF00005 ABC transporter CpPA07_RS02270 PF00950 ABC 3 transport family CpPA07_RS02275 PF02742 Iron dependent repressor, metal binding and dimerisation domain CpPA07_RS02275 PF00950 ABC 3 transport family CpPA07_RS02280 PF02742 Iron dependent repressor, metal binding and dimerisation domain CpPA07_RS02280 PF01325 Iron dependent repressor, N-terminal DNA binding domain CpPA07_RS02280 PF18357 Diphteria toxin repressor SH3 domain CpPA07_RS02285 PF00588 SpoU rRNA Methylase family CpPA07_RS02290 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CpPA07_RS02290 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CpPA07_RS02325 PF01032 FecCD transport family CpPA07_RS02330 PF00005 ABC transporter CpPA07_RS02345 PF03971 Monomeric isocitrate dehydrogenase CpPA07_RS02350 PF07690 Major Facilitator Superfamily CpPA07_RS02355 PF13411 MerR HTH family regulatory protein CpPA07_RS02355 PF06445 GyrI-like small molecule binding domain CpPA07_RS02370 PF00579 tRNA synthetases class I (W and Y) CpPA07_RS02375 PF03631 Virulence factor BrkB CpPA07_RS02380 PF00768 D-alanyl-D-alanine carboxypeptidase CpPA07_RS02395 PF00877 NlpC/P60 family CpPA07_RS02395 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain CpPA07_RS02415 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CpPA07_RS02415 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CpPA07_RS02415 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CpPA07_RS02415 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CpPA07_RS02420 PF04107 Glutamate-cysteine ligase family 2(GCS2) CpPA07_RS02420 PF01546 Peptidase family M20/M25/M40 CpPA07_RS02425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CpPA07_RS02425 PF07992 Pyridine nucleotide-disulphide oxidoreductase CpPA07_RS02430 PF00682 HMGL-like CpPA07_RS02430 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CpPA07_RS02430 PF02785 Biotin carboxylase C-terminal domain CpPA07_RS02430 PF02436 Conserved carboxylase domain CpPA07_RS02430 PF00364 Biotin-requiring enzyme CpPA07_RS02430 PF00289 Biotin carboxylase, N-terminal domain CpPA07_RS02445 PF00364 Biotin-requiring enzyme CpPA07_RS02445 PF02785 Biotin carboxylase C-terminal domain CpPA07_RS02445 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CpPA07_RS02445 PF00289 Biotin carboxylase, N-terminal domain CpPA07_RS02450 PF00581 Rhodanese-like domain CpPA07_RS02455 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CpPA07_RS02455 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CpPA07_RS02460 PF01757 Acyltransferase family CpPA07_RS02470 PF02545 Maf-like protein CpPA07_RS02475 PF00294 pfkB family carbohydrate kinase CpPA07_RS02480 PF00356 Bacterial regulatory proteins, lacI family CpPA07_RS02490 PF01039 Carboxyl transferase domain CpPA07_RS02495 PF01039 Carboxyl transferase domain CpPA07_RS02500 PF03099 Biotin/lipoate A/B protein ligase family CpPA07_RS02500 PF08279 HTH domain CpPA07_RS02500 PF02237 Biotin protein ligase C terminal domain CpPA07_RS02510 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CpPA07_RS02510 PF02222 ATP-grasp domain CpPA07_RS02515 PF00731 AIR carboxylase CpPA07_RS02530 PF00528 Binding-protein-dependent transport system inner membrane component CpPA07_RS02535 PF00528 Binding-protein-dependent transport system inner membrane component CpPA07_RS02540 PF01547 Bacterial extracellular solute-binding protein CpPA07_RS02550 PF13399 LytR cell envelope-related transcriptional attenuator CpPA07_RS02550 PF03816 Cell envelope-related transcriptional attenuator domain CpPA07_RS02560 PF00483 Nucleotidyl transferase CpPA07_RS02570 PF02467 Transcription factor WhiB CpPA07_RS02585 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CpPA07_RS02585 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CpPA07_RS02585 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CpPA07_RS02585 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CpPA07_RS02595 PF01238 Phosphomannose isomerase type I CpPA07_RS02610 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CpPA07_RS02610 PF05221 S-adenosyl-L-homocysteine hydrolase CpPA07_RS02615 PF02223 Thymidylate kinase CpPA07_RS02620 PF00072 Response regulator receiver domain CpPA07_RS02620 PF00486 Transcriptional regulatory protein, C terminal CpPA07_RS02625 PF00512 His Kinase A (phospho-acceptor) domain CpPA07_RS02625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CpPA07_RS02625 PF00672 HAMP domain CpPA07_RS02630 PF10647 Lipoprotein LpqB beta-propeller domain CpPA07_RS02640 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CpPA07_RS02640 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CpPA07_RS02645 PF07517 SecA DEAD-like domain CpPA07_RS02645 PF01043 SecA preprotein cross-linking domain CpPA07_RS02645 PF07516 SecA Wing and Scaffold domain CpPA07_RS02665 PF00175 Oxidoreductase NAD-binding domain CpPA07_RS02665 PF00111 2Fe-2S iron-sulfur cluster binding domain CpPA07_RS02665 PF00970 Oxidoreductase FAD-binding domain CpPA07_RS02670 PF00487 Fatty acid desaturase CpPA07_RS02675 PF03193 RsgA GTPase CpPA07_RS02680 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CpPA07_RS02685 PF02586 SOS response associated peptidase (SRAP) CpPA07_RS02690 PF04073 Aminoacyl-tRNA editing domain CpPA07_RS02695 PF08281 Sigma-70, region 4 CpPA07_RS02695 PF04542 Sigma-70 region 2 CpPA07_RS02710 PF02467 Transcription factor WhiB CpPA07_RS02730 PF00271 Helicase conserved C-terminal domain CpPA07_RS02730 PF00270 DEAD/DEAH box helicase CpPA07_RS02755 PF13361 UvrD-like helicase C-terminal domain CpPA07_RS02755 PF00580 UvrD/REP helicase N-terminal domain CpPA07_RS02765 PF09297 NADH pyrophosphatase zinc ribbon domain CpPA07_RS02765 PF00293 NUDIX domain CpPA07_RS02765 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CpPA07_RS02770 PF13361 UvrD-like helicase C-terminal domain CpPA07_RS02770 PF00580 UvrD/REP helicase N-terminal domain CpPA07_RS02770 PF00570 HRDC domain CpPA07_RS02790 PF05362 Lon protease (S16) C-terminal proteolytic domain CpPA07_RS02790 PF13180 PDZ domain CpPA07_RS02805 PF03699 Uncharacterised protein family (UPF0182) CpPA07_RS02850 PF07732 Multicopper oxidase CpPA07_RS02850 PF00394 Multicopper oxidase CpPA07_RS02870 PF00501 AMP-binding enzyme CpPA07_RS02870 PF00975 Thioesterase domain CpPA07_RS02870 PF13193 AMP-binding enzyme C-terminal domain CpPA07_RS02870 PF00668 Condensation domain CpPA07_RS02870 PF00550 Phosphopantetheine attachment site CpPA07_RS02885 PF00324 Amino acid permease CpPA07_RS02890 PF02436 Conserved carboxylase domain CpPA07_RS02890 PF00682 HMGL-like CpPA07_RS02895 PF01039 Carboxyl transferase domain CpPA07_RS02905 PF00364 Biotin-requiring enzyme CpPA07_RS02905 PF00682 HMGL-like CpPA07_RS02905 PF02436 Conserved carboxylase domain CpPA07_RS02915 PF00459 Inositol monophosphatase family CpPA07_RS02920 PF00459 Inositol monophosphatase family CpPA07_RS02925 PF00472 RF-1 domain CpPA07_RS02925 PF03462 PCRF domain CpPA07_RS02935 PF03806 AbgT putative transporter family CpPA07_RS02945 PF00005 ABC transporter CpPA07_RS02950 PF02687 FtsX-like permease family CpPA07_RS02950 PF18075 FtsX extracellular domain CpPA07_RS02955 PF01668 SmpB protein CpPA07_RS02965 PF00484 Carbonic anhydrase CpPA07_RS02980 PF01032 FecCD transport family CpPA07_RS02985 PF01032 FecCD transport family CpPA07_RS02990 PF00005 ABC transporter CpPA07_RS03015 PF00155 Aminotransferase class I and II CpPA07_RS03025 PF04851 Type III restriction enzyme, res subunit CpPA07_RS03025 PF00271 Helicase conserved C-terminal domain CpPA07_RS03035 PF11574 Protein of unknown function (DUF3235) CpPA07_RS03035 PF06737 Transglycosylase-like domain CpPA07_RS03040 PF00313 'Cold-shock' DNA-binding domain CpPA07_RS03055 PF11228 Protein of unknown function (DUF3027) CpPA07_RS03060 PF00860 Permease family CpPA07_RS03065 PF00588 SpoU rRNA Methylase family CpPA07_RS03075 PF11268 Protein of unknown function (DUF3071) CpPA07_RS03080 PF00266 Aminotransferase class-V CpPA07_RS03085 PF00285 Citrate synthase, C-terminal domain CpPA07_RS03090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CpPA07_RS03095 PF01039 Carboxyl transferase domain CpPA07_RS03100 PF00080 Copper/zinc superoxide dismutase (SODC) CpPA07_RS03105 PF00248 Aldo/keto reductase family CpPA07_RS03110 PF00378 Enoyl-CoA hydratase/isomerase CpPA07_RS03120 PF00474 Sodium:solute symporter family CpPA07_RS03130 PF08924 Domain of unknown function (DUF1906) CpPA07_RS03135 PF02254 TrkA-N domain CpPA07_RS03135 PF00999 Sodium/hydrogen exchanger family CpPA07_RS03145 PF01554 MatE CpPA07_RS03150 PF00291 Pyridoxal-phosphate dependent enzyme CpPA07_RS03155 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CpPA07_RS03165 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CpPA07_RS03170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CpPA07_RS03175 PF00528 Binding-protein-dependent transport system inner membrane component CpPA07_RS03180 PF00528 Binding-protein-dependent transport system inner membrane component CpPA07_RS03180 PF12911 N-terminal TM domain of oligopeptide transport permease C CpPA07_RS03185 PF00005 ABC transporter CpPA07_RS03185 PF09383 NIL domain CpPA07_RS03205 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CpPA07_RS03210 PF00462 Glutaredoxin CpPA07_RS03215 PF00186 Dihydrofolate reductase CpPA07_RS03220 PF00303 Thymidylate synthase CpPA07_RS03225 PF00459 Inositol monophosphatase family CpPA07_RS03235 PF00271 Helicase conserved C-terminal domain CpPA07_RS03235 PF08494 DEAD/H associated CpPA07_RS03235 PF00270 DEAD/DEAH box helicase CpPA07_RS03245 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CpPA07_RS03245 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CpPA07_RS03255 PF00342 Phosphoglucose isomerase CpPA07_RS03260 PF00171 Aldehyde dehydrogenase family CpPA07_RS03265 PF01817 Chorismate mutase type II CpPA07_RS03270 PF13361 UvrD-like helicase C-terminal domain CpPA07_RS03270 PF00580 UvrD/REP helicase N-terminal domain CpPA07_RS03275 PF01551 Peptidase family M23 CpPA07_RS03285 PF00551 Formyl transferase CpPA07_RS03290 PF02142 MGS-like domain CpPA07_RS03290 PF01808 AICARFT/IMPCHase bienzyme CpPA07_RS03295 PF00005 ABC transporter CpPA07_RS03300 PF00497 Bacterial extracellular solute-binding proteins, family 3 CpPA07_RS03305 PF00528 Binding-protein-dependent transport system inner membrane component CpPA07_RS03310 PF00528 Binding-protein-dependent transport system inner membrane component CpPA07_RS03320 PF00440 Bacterial regulatory proteins, tetR family CpPA07_RS03330 PF01084 Ribosomal protein S18 CpPA07_RS03335 PF00253 Ribosomal protein S14p/S29e CpPA07_RS03340 PF00471 Ribosomal protein L33 CpPA07_RS03345 PF00830 Ribosomal L28 family CpPA07_RS03350 PF01197 Ribosomal protein L31 CpPA07_RS03355 PF01783 Ribosomal L32p protein family CpPA07_RS03360 PF00486 Transcriptional regulatory protein, C terminal CpPA07_RS03360 PF00072 Response regulator receiver domain CpPA07_RS03365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CpPA07_RS03365 PF00512 His Kinase A (phospho-acceptor) domain CpPA07_RS03365 PF00672 HAMP domain CpPA07_RS03370 PF13180 PDZ domain CpPA07_RS03375 PF01967 MoaC family CpPA07_RS03375 PF00994 Probable molybdopterin binding domain CpPA07_RS03385 PF01741 Large-conductance mechanosensitive channel, MscL CpPA07_RS03400 PF00483 Nucleotidyl transferase CpPA07_RS03405 PF03454 MoeA C-terminal region (domain IV) CpPA07_RS03405 PF00994 Probable molybdopterin binding domain CpPA07_RS03405 PF03453 MoeA N-terminal region (domain I and II) CpPA07_RS03420 PF07681 DoxX CpPA07_RS03430 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CpPA07_RS03430 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase CpPA07_RS03440 PF02028 BCCT, betaine/carnitine/choline family transporter CpPA07_RS03450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CpPA07_RS03455 PF08264 Anticodon-binding domain of tRNA CpPA07_RS03455 PF09334 tRNA synthetases class I (M) CpPA07_RS03460 PF01026 TatD related DNase CpPA07_RS03465 PF07501 G5 domain CpPA07_RS03465 PF03990 G5-linked-Ubiquitin-like domain CpPA07_RS03465 PF06737 Transglycosylase-like domain CpPA07_RS03470 PF00398 Ribosomal RNA adenine dimethylase CpPA07_RS03475 PF08544 GHMP kinases C terminal CpPA07_RS03475 PF00288 GHMP kinases N terminal domain CpPA07_RS03480 PF16326 ABC transporter C-terminal domain CpPA07_RS03480 PF12848 ABC transporter CpPA07_RS03480 PF00005 ABC transporter CpPA07_RS03495 PF03976 Polyphosphate kinase 2 (PPK2) CpPA07_RS03510 PF00378 Enoyl-CoA hydratase/isomerase CpPA07_RS03525 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CpPA07_RS03525 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CpPA07_RS03540 PF03144 Elongation factor Tu domain 2 CpPA07_RS03540 PF16658 Class II release factor RF3, C-terminal domain CpPA07_RS03540 PF00009 Elongation factor Tu GTP binding domain CpPA07_RS03545 PF00106 short chain dehydrogenase CpPA07_RS03550 PF01195 Peptidyl-tRNA hydrolase CpPA07_RS03565 PF01195 Peptidyl-tRNA hydrolase CpPA07_RS03570 PF14693 Ribosomal protein TL5, C-terminal domain CpPA07_RS03570 PF01386 Ribosomal L25p family CpPA07_RS03575 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CpPA07_RS03575 PF00128 Alpha amylase, catalytic domain CpPA07_RS03575 PF17999 Pullulanase N1-terminal domain CpPA07_RS03585 PF00132 Bacterial transferase hexapeptide (six repeats) CpPA07_RS03585 PF12804 MobA-like NTP transferase domain CpPA07_RS03590 PF07732 Multicopper oxidase CpPA07_RS03590 PF07731 Multicopper oxidase CpPA07_RS03590 PF00394 Multicopper oxidase CpPA07_RS03605 PF16295 Tetracyclin repressor-like, C-terminal domain CpPA07_RS03605 PF00440 Bacterial regulatory proteins, tetR family CpPA07_RS03610 PF03461 TRCF domain CpPA07_RS03610 PF00271 Helicase conserved C-terminal domain CpPA07_RS03610 PF00270 DEAD/DEAH box helicase CpPA07_RS03610 PF02559 CarD-like/TRCF domain CpPA07_RS03610 PF17757 UvrB interaction domain CpPA07_RS03615 PF13520 Amino acid permease CpPA07_RS03620 PF03819 MazG nucleotide pyrophosphohydrolase domain CpPA07_RS03630 PF03952 Enolase, N-terminal domain CpPA07_RS03630 PF00113 Enolase, C-terminal TIM barrel domain CpPA07_RS03645 PF02541 Ppx/GppA phosphatase family CpPA07_RS03660 PF12833 Helix-turn-helix domain CpPA07_RS03675 PF03449 Transcription elongation factor, N-terminal CpPA07_RS03675 PF01272 Transcription elongation factor, GreA/GreB, C-term CpPA07_RS03685 PF02585 GlcNAc-PI de-N-acetylase CpPA07_RS03695 PF01255 Putative undecaprenyl diphosphate synthase CpPA07_RS03705 PF00485 Phosphoribulokinase / Uridine kinase family CpPA07_RS03710 PF00464 Serine hydroxymethyltransferase CpPA07_RS03715 PF07690 Major Facilitator Superfamily CpPA07_RS03745 PF07690 Major Facilitator Superfamily CpPA07_RS03755 PF00206 Lyase CpPA07_RS03755 PF10415 Fumarase C C-terminus CpPA07_RS03760 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CpPA07_RS03770 PF02609 Exonuclease VII small subunit CpPA07_RS03775 PF02601 Exonuclease VII, large subunit CpPA07_RS03775 PF13742 OB-fold nucleic acid binding domain CpPA07_RS03780 PF02401 LytB protein CpPA07_RS03790 PF01594 AI-2E family transporter CpPA07_RS03795 PF06071 Protein of unknown function (DUF933) CpPA07_RS03795 PF01926 50S ribosome-binding GTPase CpPA07_RS03810 PF03831 PhnA domain CpPA07_RS03810 PF08274 PhnA Zinc-Ribbon CpPA07_RS03815 PF00005 ABC transporter CpPA07_RS03815 PF00664 ABC transporter transmembrane region CpPA07_RS03820 PF00005 ABC transporter CpPA07_RS03820 PF00664 ABC transporter transmembrane region CpPA07_RS03825 PF00005 ABC transporter CpPA07_RS03825 PF17760 UvrA interaction domain CpPA07_RS03825 PF17755 UvrA DNA-binding domain CpPA07_RS03830 PF05661 Protein of unknown function (DUF808) CpPA07_RS03840 PF09819 ABC-type cobalt transport system, permease component CpPA07_RS03845 PF00005 ABC transporter CpPA07_RS03855 PF02224 Cytidylate kinase CpPA07_RS03865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CpPA07_RS03870 PF00528 Binding-protein-dependent transport system inner membrane component CpPA07_RS03875 PF12911 N-terminal TM domain of oligopeptide transport permease C CpPA07_RS03875 PF00528 Binding-protein-dependent transport system inner membrane component CpPA07_RS03880 PF00005 ABC transporter CpPA07_RS03880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CpPA07_RS03885 PF00089 Trypsin CpPA07_RS03890 PF03960 ArsC family CpPA07_RS03905 PF03144 Elongation factor Tu domain 2 CpPA07_RS03905 PF00009 Elongation factor Tu GTP binding domain CpPA07_RS03905 PF14492 Elongation Factor G, domain II CpPA07_RS03905 PF00679 Elongation factor G C-terminus CpPA07_RS03910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CpPA07_RS03915 PF02585 GlcNAc-PI de-N-acetylase CpPA07_RS03925 PF00037 4Fe-4S binding domain CpPA07_RS03930 PF00155 Aminotransferase class I and II CpPA07_RS03945 PF00324 Amino acid permease CpPA07_RS03950 PF14602 Hexapeptide repeat of succinyl-transferase CpPA07_RS03950 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CpPA07_RS03955 PF00324 Amino acid permease CpPA07_RS03960 PF14602 Hexapeptide repeat of succinyl-transferase CpPA07_RS03960 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CpPA07_RS03965 PF01546 Peptidase family M20/M25/M40 CpPA07_RS03965 PF07687 Peptidase dimerisation domain CpPA07_RS03970 PF03641 Possible lysine decarboxylase CpPA07_RS03975 PF00809 Pterin binding enzyme CpPA07_RS03980 PF00535 Glycosyl transferase family 2 CpPA07_RS04010 PF00534 Glycosyl transferases group 1 CpPA07_RS04010 PF13439 Glycosyltransferase Family 4 CpPA07_RS04015 PF00483 Nucleotidyl transferase CpPA07_RS04020 PF01596 O-methyltransferase CpPA07_RS04025 PF04542 Sigma-70 region 2 CpPA07_RS04025 PF08281 Sigma-70, region 4 CpPA07_RS04040 PF10609 NUBPL iron-transfer P-loop NTPase CpPA07_RS04040 PF01883 Iron-sulfur cluster assembly protein CpPA07_RS04050 PF00571 CBS domain CpPA07_RS04050 PF01769 Divalent cation transporter CpPA07_RS04050 PF03448 MgtE intracellular N domain CpPA07_RS04060 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CpPA07_RS04060 PF16078 2-oxoglutarate dehydrogenase N-terminus CpPA07_RS04060 PF00676 Dehydrogenase E1 component CpPA07_RS04060 PF16870 2-oxoglutarate dehydrogenase C-terminal CpPA07_RS04060 PF02779 Transketolase, pyrimidine binding domain CpPA07_RS04065 PF00664 ABC transporter transmembrane region CpPA07_RS04065 PF00005 ABC transporter CpPA07_RS04075 PF08501 Shikimate dehydrogenase substrate binding domain CpPA07_RS04080 PF00135 Carboxylesterase family CpPA07_RS04100 PF01263 Aldose 1-epimerase CpPA07_RS04115 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CpPA07_RS04115 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CpPA07_RS04120 PF10509 Galactokinase galactose-binding signature CpPA07_RS04120 PF08544 GHMP kinases C terminal CpPA07_RS04120 PF00288 GHMP kinases N terminal domain CpPA07_RS04125 PF03880 DbpA RNA binding domain CpPA07_RS04125 PF00270 DEAD/DEAH box helicase CpPA07_RS04125 PF00271 Helicase conserved C-terminal domain CpPA07_RS04150 PF00474 Sodium:solute symporter family CpPA07_RS04155 PF00176 SNF2 family N-terminal domain CpPA07_RS04155 PF00271 Helicase conserved C-terminal domain CpPA07_RS04155 PF12419 SNF2 Helicase protein CpPA07_RS04170 PF13175 AAA ATPase domain CpPA07_RS04210 PF02589 LUD domain CpPA07_RS04215 PF11870 Domain of unknown function (DUF3390) CpPA07_RS04215 PF02589 LUD domain CpPA07_RS04215 PF13183 4Fe-4S dicluster domain CpPA07_RS04220 PF02754 Cysteine-rich domain CpPA07_RS04225 PF02652 L-lactate permease CpPA07_RS04230 PF03485 Arginyl tRNA synthetase N terminal domain CpPA07_RS04230 PF05746 DALR anticodon binding domain CpPA07_RS04230 PF00750 tRNA synthetases class I (R) CpPA07_RS04235 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CpPA07_RS04235 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CpPA07_RS04240 PF01842 ACT domain CpPA07_RS04240 PF00742 Homoserine dehydrogenase CpPA07_RS04240 PF03447 Homoserine dehydrogenase, NAD binding domain CpPA07_RS04245 PF00288 GHMP kinases N terminal domain CpPA07_RS04255 PF00501 AMP-binding enzyme CpPA07_RS04255 PF13193 AMP-binding enzyme C-terminal domain CpPA07_RS04260 PF07497 Rho termination factor, RNA-binding domain CpPA07_RS04260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CpPA07_RS04260 PF07498 Rho termination factor, N-terminal domain CpPA07_RS04260 PF07497 Rho termination factor, RNA-binding domain CpPA07_RS04260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CpPA07_RS04260 PF07498 Rho termination factor, N-terminal domain CpPA07_RS04265 PF03462 PCRF domain CpPA07_RS04265 PF00472 RF-1 domain CpPA07_RS04270 PF17827 PrmC N-terminal domain CpPA07_RS04270 PF05175 Methyltransferase small domain CpPA07_RS04275 PF01300 Telomere recombination CpPA07_RS04280 PF00953 Glycosyl transferase family 4 CpPA07_RS04290 PF00119 ATP synthase A chain CpPA07_RS04295 PF00137 ATP synthase subunit C CpPA07_RS04300 PF00430 ATP synthase B/B' CF(0) CpPA07_RS04305 PF00213 ATP synthase delta (OSCP) subunit CpPA07_RS04310 PF02874 ATP synthase alpha/beta family, beta-barrel domain CpPA07_RS04310 PF00306 ATP synthase alpha/beta chain, C terminal domain CpPA07_RS04310 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CpPA07_RS04315 PF00231 ATP synthase CpPA07_RS04320 PF02874 ATP synthase alpha/beta family, beta-barrel domain CpPA07_RS04320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CpPA07_RS04325 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CpPA07_RS04335 PF01939 Endonuclease NucS CpPA07_RS04350 PF01910 Thiamine-binding protein CpPA07_RS04355 PF00085 Thioredoxin CpPA07_RS04360 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CpPA07_RS04360 PF02806 Alpha amylase, C-terminal all-beta domain CpPA07_RS04360 PF00128 Alpha amylase, catalytic domain CpPA07_RS04365 PF11896 Domain of unknown function (DUF3416) CpPA07_RS04370 PF00005 ABC transporter CpPA07_RS04380 PF18096 THUMP domain-like CpPA07_RS04385 PF01012 Electron transfer flavoprotein domain CpPA07_RS04390 PF00766 Electron transfer flavoprotein FAD-binding domain CpPA07_RS04390 PF01012 Electron transfer flavoprotein domain CpPA07_RS04395 PF00266 Aminotransferase class-V CpPA07_RS04420 PF00533 BRCA1 C Terminus (BRCT) domain CpPA07_RS04420 PF01653 NAD-dependent DNA ligase adenylation domain CpPA07_RS04420 PF12826 Helix-hairpin-helix motif CpPA07_RS04420 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CpPA07_RS04420 PF03120 NAD-dependent DNA ligase OB-fold domain CpPA07_RS04430 PF02686 Glu-tRNAGln amidotransferase C subunit CpPA07_RS04435 PF01425 Amidase CpPA07_RS04445 PF07690 Major Facilitator Superfamily CpPA07_RS04455 PF01032 FecCD transport family CpPA07_RS04460 PF00005 ABC transporter CpPA07_RS04470 PF00365 Phosphofructokinase CpPA07_RS04475 PF02934 GatB/GatE catalytic domain CpPA07_RS04475 PF02637 GatB domain CpPA07_RS04480 PF00248 Aldo/keto reductase family CpPA07_RS04485 PF01810 LysE type translocator CpPA07_RS04490 PF03466 LysR substrate binding domain CpPA07_RS04490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CpPA07_RS04505 PF00920 Dehydratase family CpPA07_RS04515 PF00924 Mechanosensitive ion channel CpPA07_RS04525 PF01842 ACT domain CpPA07_RS04525 PF10369 Small subunit of acetolactate synthase CpPA07_RS04530 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CpPA07_RS04530 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CpPA07_RS04535 PF01545 Cation efflux family CpPA07_RS04550 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CpPA07_RS04550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CpPA07_RS04550 PF01842 ACT domain CpPA07_RS04555 PF00180 Isocitrate/isopropylmalate dehydrogenase CpPA07_RS04575 PF01557 Fumarylacetoacetate (FAA) hydrolase family CpPA07_RS04580 PF00425 chorismate binding enzyme CpPA07_RS04585 PF00749 tRNA synthetases class I (E and Q), catalytic domain CpPA07_RS04590 PF10503 Esterase PHB depolymerase CpPA07_RS04605 PF01083 Cutinase CpPA07_RS04615 PF04055 Radical SAM superfamily CpPA07_RS04615 PF06968 Biotin and Thiamin Synthesis associated domain CpPA07_RS04630 PF00330 Aconitase family (aconitate hydratase) CpPA07_RS04635 PF00694 Aconitase C-terminal domain CpPA07_RS04645 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CpPA07_RS04645 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CpPA07_RS04650 PF07478 D-ala D-ala ligase C-terminus CpPA07_RS04650 PF01820 D-ala D-ala ligase N-terminus CpPA07_RS04660 PF00586 AIR synthase related protein, N-terminal domain CpPA07_RS04660 PF02769 AIR synthase related protein, C-terminal domain CpPA07_RS04665 PF03167 Uracil DNA glycosylase superfamily CpPA07_RS04670 PF02734 DAK2 domain CpPA07_RS04670 PF13684 Dihydroxyacetone kinase family CpPA07_RS04675 PF00270 DEAD/DEAH box helicase CpPA07_RS04675 PF00271 Helicase conserved C-terminal domain CpPA07_RS04675 PF17191 RecG wedge domain CpPA07_RS04680 PF00364 Biotin-requiring enzyme CpPA07_RS04690 PF01467 Cytidylyltransferase-like CpPA07_RS04700 PF02567 Phenazine biosynthesis-like protein CpPA07_RS04705 PF00005 ABC transporter CpPA07_RS04710 PF00528 Binding-protein-dependent transport system inner membrane component CpPA07_RS04730 PF00476 DNA polymerase family A CpPA07_RS04730 PF01367 5'-3' exonuclease, C-terminal SAM fold CpPA07_RS04730 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CpPA07_RS04735 PF01209 ubiE/COQ5 methyltransferase family CpPA07_RS04740 PF00575 S1 RNA binding domain CpPA07_RS04745 PF02378 Phosphotransferase system, EIIC CpPA07_RS04745 PF00367 phosphotransferase system, EIIB CpPA07_RS04745 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CpPA07_RS04750 PF01121 Dephospho-CoA kinase CpPA07_RS04760 PF17757 UvrB interaction domain CpPA07_RS04760 PF04851 Type III restriction enzyme, res subunit CpPA07_RS04760 PF00271 Helicase conserved C-terminal domain CpPA07_RS04760 PF12344 Ultra-violet resistance protein B CpPA07_RS04760 PF02151 UvrB/uvrC motif CpPA07_RS04765 PF00582 Universal stress protein family CpPA07_RS04770 PF13538 UvrD-like helicase C-terminal domain CpPA07_RS04780 PF00753 Metallo-beta-lactamase superfamily CpPA07_RS04780 PF16123 Hydroxyacylglutathione hydrolase C-terminus CpPA07_RS04785 PF17755 UvrA DNA-binding domain CpPA07_RS04785 PF17760 UvrA interaction domain CpPA07_RS04785 PF00005 ABC transporter CpPA07_RS04790 PF00707 Translation initiation factor IF-3, C-terminal domain CpPA07_RS04790 PF05198 Translation initiation factor IF-3, N-terminal domain CpPA07_RS04795 PF01632 Ribosomal protein L35 CpPA07_RS04800 PF00453 Ribosomal protein L20 CpPA07_RS04810 PF00588 SpoU rRNA Methylase family CpPA07_RS04810 PF08032 RNA 2'-O ribose methyltransferase substrate binding CpPA07_RS04815 PF01409 tRNA synthetases class II core domain (F) CpPA07_RS04815 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CpPA07_RS04820 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CpPA07_RS04820 PF01588 Putative tRNA binding domain CpPA07_RS04820 PF03147 Ferredoxin-fold anticodon binding domain CpPA07_RS04820 PF03484 tRNA synthetase B5 domain CpPA07_RS04820 PF03483 B3/4 domain CpPA07_RS04825 PF02774 Semialdehyde dehydrogenase, dimerisation domain CpPA07_RS04825 PF01118 Semialdehyde dehydrogenase, NAD binding domain CpPA07_RS04830 PF01960 ArgJ family CpPA07_RS04835 PF00696 Amino acid kinase family CpPA07_RS04840 PF00202 Aminotransferase class-III CpPA07_RS04845 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CpPA07_RS04845 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CpPA07_RS04850 PF02863 Arginine repressor, C-terminal domain CpPA07_RS04850 PF01316 Arginine repressor, DNA binding domain CpPA07_RS04855 PF00764 Arginosuccinate synthase CpPA07_RS04860 PF14698 Argininosuccinate lyase C-terminal CpPA07_RS04860 PF00206 Lyase CpPA07_RS04865 PF03966 Trm112p-like protein CpPA07_RS04870 PF00579 tRNA synthetases class I (W and Y) CpPA07_RS04900 PF13344 Haloacid dehalogenase-like hydrolase CpPA07_RS04900 PF18407 GCN5-related N-acetyltransferase like domain CpPA07_RS04905 PF01479 S4 domain CpPA07_RS04905 PF01728 FtsJ-like methyltransferase CpPA07_RS04910 PF01513 ATP-NAD kinase CpPA07_RS04915 PF02463 RecF/RecN/SMC N terminal domain CpPA07_RS04925 PF11382 Copper transport outer membrane protein, MctB CpPA07_RS04930 PF00293 NUDIX domain CpPA07_RS04935 PF02899 Phage integrase, N-terminal SAM-like domain CpPA07_RS04935 PF00589 Phage integrase family CpPA07_RS04940 PF13614 AAA domain CpPA07_RS04945 PF02616 Segregation and condensation protein ScpA CpPA07_RS04955 PF00854 POT family CpPA07_RS04960 PF00202 Aminotransferase class-III CpPA07_RS04970 PF04079 Segregation and condensation complex subunit ScpB CpPA07_RS04975 PF00849 RNA pseudouridylate synthase CpPA07_RS04975 PF01479 S4 domain CpPA07_RS04980 PF02224 Cytidylate kinase CpPA07_RS04985 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CpPA07_RS04985 PF01926 50S ribosome-binding GTPase CpPA07_RS05000 PF00756 Putative esterase CpPA07_RS05005 PF09924 Uncharacterised conserved protein (DUF2156) CpPA07_RS05010 PF01497 Periplasmic binding protein CpPA07_RS05015 PF01032 FecCD transport family CpPA07_RS05020 PF01032 FecCD transport family CpPA07_RS05025 PF00005 ABC transporter CpPA07_RS05030 PF06276 Ferric iron reductase FhuF-like transporter CpPA07_RS05030 PF04183 IucA / IucC family CpPA07_RS05040 PF02371 Transposase IS116/IS110/IS902 family CpPA07_RS05040 PF01548 Transposase CpPA07_RS05065 PF02810 SEC-C motif CpPA07_RS05075 PF07516 SecA Wing and Scaffold domain CpPA07_RS05075 PF01043 SecA preprotein cross-linking domain CpPA07_RS05075 PF07517 SecA DEAD-like domain CpPA07_RS05080 PF00498 FHA domain CpPA07_RS05085 PF00376 MerR family regulatory protein CpPA07_RS05095 PF13411 MerR HTH family regulatory protein CpPA07_RS05110 PF00571 CBS domain CpPA07_RS05110 PF01595 Cyclin M transmembrane N-terminal domain CpPA07_RS05115 PF03471 Transporter associated domain CpPA07_RS05115 PF01595 Cyclin M transmembrane N-terminal domain CpPA07_RS05115 PF00571 CBS domain CpPA07_RS05120 PF00270 DEAD/DEAH box helicase CpPA07_RS05120 PF00271 Helicase conserved C-terminal domain CpPA07_RS05125 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CpPA07_RS05125 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CpPA07_RS05130 PF03061 Thioesterase superfamily CpPA07_RS05135 PF01544 CorA-like Mg2+ transporter protein CpPA07_RS05155 PF00083 Sugar (and other) transporter CpPA07_RS05155 PF07690 Major Facilitator Superfamily CpPA07_RS05180 PF13397 RNA polymerase-binding protein CpPA07_RS05185 PF00535 Glycosyl transferase family 2 CpPA07_RS05190 PF00795 Carbon-nitrogen hydrolase CpPA07_RS05190 PF00535 Glycosyl transferase family 2 CpPA07_RS05200 PF02514 CobN/Magnesium Chelatase CpPA07_RS05205 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CpPA07_RS05205 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CpPA07_RS05210 PF02570 Precorrin-8X methylmutase CpPA07_RS05215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CpPA07_RS05220 PF02571 Precorrin-6x reductase CbiJ/CobK CpPA07_RS05225 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CpPA07_RS05230 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CpPA07_RS05235 PF00106 short chain dehydrogenase CpPA07_RS05240 PF01321 Creatinase/Prolidase N-terminal domain CpPA07_RS05240 PF00557 Metallopeptidase family M24 CpPA07_RS05245 PF00270 DEAD/DEAH box helicase CpPA07_RS05245 PF00271 Helicase conserved C-terminal domain CpPA07_RS05245 PF08148 DSHCT (NUC185) domain CpPA07_RS05250 PF00902 Sec-independent protein translocase protein (TatC) CpPA07_RS05255 PF02416 mttA/Hcf106 family CpPA07_RS05260 PF13280 WYL domain CpPA07_RS05270 PF03136 Pup-ligase protein CpPA07_RS05275 PF05639 Pup-like protein CpPA07_RS05280 PF03136 Pup-ligase protein CpPA07_RS05285 PF17758 Proteasomal ATPase OB N-terminal domain CpPA07_RS05285 PF16450 Proteasomal ATPase OB C-terminal domain CpPA07_RS05285 PF00004 ATPase family associated with various cellular activities (AAA) CpPA07_RS05290 PF08704 tRNA methyltransferase complex GCD14 subunit CpPA07_RS05295 PF02127 Aminopeptidase I zinc metalloprotease (M18) CpPA07_RS05310 PF01268 Formate--tetrahydrofolate ligase CpPA07_RS05315 PF10415 Fumarase C C-terminus CpPA07_RS05315 PF00206 Lyase CpPA07_RS05320 PF03605 Anaerobic c4-dicarboxylate membrane transporter CpPA07_RS05325 PF01634 ATP phosphoribosyltransferase CpPA07_RS05325 PF08029 HisG, C-terminal domain CpPA07_RS05330 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CpPA07_RS05335 PF13419 Haloacid dehalogenase-like hydrolase CpPA07_RS05340 PF02965 Vitamin B12 dependent methionine synthase, activation domain CpPA07_RS05340 PF02607 B12 binding domain CpPA07_RS05340 PF02574 Homocysteine S-methyltransferase CpPA07_RS05340 PF00809 Pterin binding enzyme CpPA07_RS05340 PF02310 B12 binding domain CpPA07_RS05350 PF01406 tRNA synthetases class I (C) catalytic domain CpPA07_RS05355 PF02673 Bacitracin resistance protein BacA CpPA07_RS05360 PF00248 Aldo/keto reductase family CpPA07_RS05370 PF01180 Dihydroorotate dehydrogenase CpPA07_RS05385 PF01161 Phosphatidylethanolamine-binding protein CpPA07_RS05390 PF00381 PTS HPr component phosphorylation site CpPA07_RS05390 PF00391 PEP-utilising enzyme, mobile domain CpPA07_RS05390 PF05524 PEP-utilising enzyme, N-terminal CpPA07_RS05390 PF03610 PTS system fructose IIA component CpPA07_RS05395 PF02734 DAK2 domain CpPA07_RS05400 PF02733 Dak1 domain CpPA07_RS05410 PF08402 TOBE domain CpPA07_RS05410 PF00005 ABC transporter CpPA07_RS05415 PF00005 ABC transporter CpPA07_RS05415 PF16326 ABC transporter C-terminal domain CpPA07_RS05425 PF00106 short chain dehydrogenase CpPA07_RS05435 PF01642 Methylmalonyl-CoA mutase CpPA07_RS05435 PF02310 B12 binding domain CpPA07_RS05440 PF01642 Methylmalonyl-CoA mutase CpPA07_RS05445 PF09335 SNARE associated Golgi protein CpPA07_RS05455 PF01145 SPFH domain / Band 7 family CpPA07_RS05475 PF00762 Ferrochelatase CpPA07_RS05480 PF00877 NlpC/P60 family CpPA07_RS05490 PF00330 Aconitase family (aconitate hydratase) CpPA07_RS05490 PF00694 Aconitase C-terminal domain CpPA07_RS05495 PF00440 Bacterial regulatory proteins, tetR family CpPA07_RS05510 PF05167 Uncharacterised ACR (DUF711) CpPA07_RS05530 PF12848 ABC transporter CpPA07_RS05530 PF16326 ABC transporter C-terminal domain CpPA07_RS05530 PF00005 ABC transporter CpPA07_RS05535 PF01883 Iron-sulfur cluster assembly protein CpPA07_RS05540 PF01592 NifU-like N terminal domain CpPA07_RS05545 PF00266 Aminotransferase class-V CpPA07_RS05550 PF00005 ABC transporter CpPA07_RS05555 PF01458 Uncharacterized protein family (UPF0051) CpPA07_RS05560 PF01458 Uncharacterized protein family (UPF0051) CpPA07_RS05575 PF13732 Domain of unknown function (DUF4162) CpPA07_RS05575 PF00005 ABC transporter CpPA07_RS05590 PF01040 UbiA prenyltransferase family CpPA07_RS05595 PF02780 Transketolase, C-terminal domain CpPA07_RS05595 PF00456 Transketolase, thiamine diphosphate binding domain CpPA07_RS05595 PF02779 Transketolase, pyrimidine binding domain CpPA07_RS05600 PF00923 Transaldolase/Fructose-6-phosphate aldolase CpPA07_RS05605 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CpPA07_RS05605 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CpPA07_RS05615 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CpPA07_RS05620 PF03840 Preprotein translocase SecG subunit CpPA07_RS05625 PF00311 Phosphoenolpyruvate carboxylase CpPA07_RS05630 PF00121 Triosephosphate isomerase CpPA07_RS05635 PF00162 Phosphoglycerate kinase CpPA07_RS05640 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CpPA07_RS05640 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CpPA07_RS05645 PF10298 WhiA N-terminal LAGLIDADG-like domain CpPA07_RS05645 PF14527 WhiA LAGLIDADG-like domain CpPA07_RS05645 PF02650 WhiA C-terminal HTH domain CpPA07_RS05650 PF01933 Uncharacterised protein family UPF0052 CpPA07_RS05655 PF03668 P-loop ATPase protein family CpPA07_RS05660 PF02151 UvrB/uvrC motif CpPA07_RS05660 PF01541 GIY-YIG catalytic domain CpPA07_RS05660 PF08459 UvrC Helix-hairpin-helix N-terminal CpPA07_RS05665 PF10756 Bacterial PH domain CpPA07_RS05670 PF00885 6,7-dimethyl-8-ribityllumazine synthase CpPA07_RS05675 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CpPA07_RS05675 PF00925 GTP cyclohydrolase II CpPA07_RS05680 PF00677 Lumazine binding domain CpPA07_RS05685 PF01872 RibD C-terminal domain CpPA07_RS05685 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CpPA07_RS05690 PF00834 Ribulose-phosphate 3 epimerase family CpPA07_RS05695 PF01189 16S rRNA methyltransferase RsmB/F CpPA07_RS05695 PF01029 NusB family CpPA07_RS05700 PF02911 Formyl transferase, C-terminal domain CpPA07_RS05700 PF00551 Formyl transferase CpPA07_RS05705 PF01327 Polypeptide deformylase CpPA07_RS05710 PF17764 3′ DNA-binding domain (3′BD) CpPA07_RS05715 PF00438 S-adenosylmethionine synthetase, N-terminal domain CpPA07_RS05715 PF02772 S-adenosylmethionine synthetase, central domain CpPA07_RS05715 PF02773 S-adenosylmethionine synthetase, C-terminal domain CpPA07_RS05720 PF02441 Flavoprotein CpPA07_RS05720 PF04127 DNA / pantothenate metabolism flavoprotein CpPA07_RS05725 PF01192 RNA polymerase Rpb6 CpPA07_RS05730 PF00625 Guanylate kinase CpPA07_RS05740 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CpPA07_RS05745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CpPA07_RS05745 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CpPA07_RS05745 PF02142 MGS-like domain CpPA07_RS05750 PF00117 Glutamine amidotransferase class-I CpPA07_RS05750 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CpPA07_RS05755 PF01979 Amidohydrolase family CpPA07_RS05760 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CpPA07_RS05760 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CpPA07_RS05765 PF00156 Phosphoribosyl transferase domain CpPA07_RS05770 PF08338 Domain of unknown function (DUF1731) CpPA07_RS05770 PF01370 NAD dependent epimerase/dehydratase family CpPA07_RS05785 PF01029 NusB family CpPA07_RS05790 PF09285 Elongation factor P, C-terminal CpPA07_RS05790 PF08207 Elongation factor P (EF-P) KOW-like domain CpPA07_RS05790 PF01132 Elongation factor P (EF-P) OB domain CpPA07_RS05795 PF00557 Metallopeptidase family M24 CpPA07_RS05795 PF01321 Creatinase/Prolidase N-terminal domain CpPA07_RS05800 PF01220 Dehydroquinase class II CpPA07_RS05805 PF01761 3-dehydroquinate synthase CpPA07_RS05810 PF01202 Shikimate kinase CpPA07_RS05815 PF01264 Chorismate synthase CpPA07_RS05825 PF08501 Shikimate dehydrogenase substrate binding domain CpPA07_RS05825 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CpPA07_RS05825 PF01488 Shikimate / quinate 5-dehydrogenase CpPA07_RS05835 PF03652 Holliday junction resolvase CpPA07_RS05840 PF02272 DHHA1 domain CpPA07_RS05840 PF01411 tRNA synthetases class II (A) CpPA07_RS05840 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CpPA07_RS05845 PF12002 MgsA AAA+ ATPase C terminal CpPA07_RS05845 PF00004 ATPase family associated with various cellular activities (AAA) CpPA07_RS05845 PF16193 AAA C-terminal domain CpPA07_RS05855 PF00152 tRNA synthetases class II (D, K and N) CpPA07_RS05855 PF02938 GAD domain CpPA07_RS05855 PF01336 OB-fold nucleic acid binding domain CpPA07_RS05860 PF04228 Putative neutral zinc metallopeptidase CpPA07_RS05865 PF00271 Helicase conserved C-terminal domain CpPA07_RS05865 PF00176 SNF2 family N-terminal domain CpPA07_RS05865 PF04434 SWIM zinc finger CpPA07_RS05885 PF03358 NADPH-dependent FMN reductase CpPA07_RS05890 PF03313 Serine dehydratase alpha chain CpPA07_RS05890 PF03315 Serine dehydratase beta chain CpPA07_RS05895 PF03328 HpcH/HpaI aldolase/citrate lyase family CpPA07_RS05905 PF02515 CoA-transferase family III CpPA07_RS05910 PF13393 Histidyl-tRNA synthetase CpPA07_RS05910 PF03129 Anticodon binding domain CpPA07_RS05915 PF00753 Metallo-beta-lactamase superfamily CpPA07_RS05920 PF08534 Redoxin CpPA07_RS05925 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CpPA07_RS05935 PF02824 TGS domain CpPA07_RS05935 PF04607 Region found in RelA / SpoT proteins CpPA07_RS05935 PF13291 ACT domain CpPA07_RS05940 PF00156 Phosphoribosyl transferase domain CpPA07_RS05945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CpPA07_RS05950 PF02355 Protein export membrane protein CpPA07_RS05950 PF07549 SecD/SecF GG Motif CpPA07_RS05955 PF07549 SecD/SecF GG Motif CpPA07_RS05955 PF02355 Protein export membrane protein CpPA07_RS05965 PF05496 Holliday junction DNA helicase RuvB P-loop domain CpPA07_RS05965 PF05491 RuvB C-terminal winged helix domain CpPA07_RS05965 PF17864 RuvB AAA lid domain CpPA07_RS05970 PF07499 RuvA, C-terminal domain CpPA07_RS05970 PF01330 RuvA N terminal domain CpPA07_RS05975 PF02075 Crossover junction endodeoxyribonuclease RuvC CpPA07_RS05980 PF01709 Transcriptional regulator CpPA07_RS05995 PF03744 6-carboxyhexanoate--CoA ligase CpPA07_RS06000 PF00155 Aminotransferase class I and II CpPA07_RS06000 PF03744 6-carboxyhexanoate--CoA ligase CpPA07_RS06010 PF13439 Glycosyltransferase Family 4 CpPA07_RS06015 PF03279 Bacterial lipid A biosynthesis acyltransferase CpPA07_RS06020 PF01066 CDP-alcohol phosphatidyltransferase CpPA07_RS06025 PF01230 HIT domain CpPA07_RS06030 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CpPA07_RS06030 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CpPA07_RS06030 PF03129 Anticodon binding domain CpPA07_RS06035 PF04261 Dyp-type peroxidase family CpPA07_RS06035 PF10518 TAT (twin-arginine translocation) pathway signal sequence CpPA07_RS06085 PF09594 Glycosyltransferase family 87 CpPA07_RS06090 PF01641 SelR domain CpPA07_RS06095 PF06778 Chlorite dismutase CpPA07_RS06110 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CpPA07_RS06110 PF02780 Transketolase, C-terminal domain CpPA07_RS06110 PF02779 Transketolase, pyrimidine binding domain CpPA07_RS06115 PF01938 TRAM domain CpPA07_RS06115 PF05958 tRNA (Uracil-5-)-methyltransferase CpPA07_RS06130 PF00692 dUTPase CpPA07_RS06145 PF00459 Inositol monophosphatase family CpPA07_RS06150 PF00480 ROK family CpPA07_RS06155 PF00140 Sigma-70 factor, region 1.2 CpPA07_RS06155 PF04542 Sigma-70 region 2 CpPA07_RS06155 PF04539 Sigma-70 region 3 CpPA07_RS06155 PF04545 Sigma-70, region 4 CpPA07_RS06165 PF04851 Type III restriction enzyme, res subunit CpPA07_RS06180 PF05175 Methyltransferase small domain CpPA07_RS06180 PF17827 PrmC N-terminal domain CpPA07_RS06185 PF02580 D-Tyr-tRNA(Tyr) deacylase CpPA07_RS06190 PF04542 Sigma-70 region 2 CpPA07_RS06190 PF04539 Sigma-70 region 3 CpPA07_RS06190 PF00140 Sigma-70 factor, region 1.2 CpPA07_RS06190 PF04545 Sigma-70, region 4 CpPA07_RS06195 PF18357 Diphteria toxin repressor SH3 domain CpPA07_RS06195 PF01325 Iron dependent repressor, N-terminal DNA binding domain CpPA07_RS06195 PF02742 Iron dependent repressor, metal binding and dimerisation domain CpPA07_RS06200 PF01370 NAD dependent epimerase/dehydratase family CpPA07_RS06215 PF00270 DEAD/DEAH box helicase CpPA07_RS06215 PF00271 Helicase conserved C-terminal domain CpPA07_RS06215 PF08148 DSHCT (NUC185) domain CpPA07_RS06220 PF02627 Carboxymuconolactone decarboxylase family CpPA07_RS06225 PF00578 AhpC/TSA family CpPA07_RS06230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CpPA07_RS06230 PF03466 LysR substrate binding domain CpPA07_RS06240 PF00271 Helicase conserved C-terminal domain CpPA07_RS06240 PF04408 Helicase associated domain (HA2) CpPA07_RS06240 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CpPA07_RS06240 PF11898 Domain of unknown function (DUF3418) CpPA07_RS06240 PF00270 DEAD/DEAH box helicase CpPA07_RS06245 PF03477 ATP cone domain CpPA07_RS06255 PF00717 Peptidase S24-like CpPA07_RS06255 PF01726 LexA DNA binding domain CpPA07_RS06260 PF00455 DeoR C terminal sensor domain CpPA07_RS06260 PF08220 DeoR-like helix-turn-helix domain CpPA07_RS06265 PF00391 PEP-utilising enzyme, mobile domain CpPA07_RS06265 PF05524 PEP-utilising enzyme, N-terminal CpPA07_RS06265 PF02896 PEP-utilising enzyme, TIM barrel domain CpPA07_RS06270 PF08220 DeoR-like helix-turn-helix domain CpPA07_RS06270 PF00455 DeoR C terminal sensor domain CpPA07_RS06275 PF00294 pfkB family carbohydrate kinase CpPA07_RS06280 PF02378 Phosphotransferase system, EIIC CpPA07_RS06280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CpPA07_RS06290 PF00381 PTS HPr component phosphorylation site CpPA07_RS06295 PF00296 Luciferase-like monooxygenase CpPA07_RS06300 PF03358 NADPH-dependent FMN reductase CpPA07_RS06305 PF00860 Permease family CpPA07_RS06310 PF13167 GTP-binding GTPase N-terminal CpPA07_RS06310 PF16360 GTP-binding GTPase Middle Region CpPA07_RS06310 PF01926 50S ribosome-binding GTPase CpPA07_RS06325 PF01678 Diaminopimelate epimerase CpPA07_RS06340 PF03993 Domain of Unknown Function (DUF349) CpPA07_RS06355 PF04055 Radical SAM superfamily CpPA07_RS06355 PF00919 Uncharacterized protein family UPF0004 CpPA07_RS06360 PF02631 RecX family CpPA07_RS06365 PF00154 recA bacterial DNA recombination protein CpPA07_RS06370 PF11248 Protein of unknown function (DUF3046) CpPA07_RS06375 PF02632 BioY family CpPA07_RS06380 PF00005 ABC transporter CpPA07_RS06385 PF02361 Cobalt transport protein CpPA07_RS06390 PF04012 PspA/IM30 family CpPA07_RS06400 PF18146 Damage-inducible protein CinA KH domain CpPA07_RS06400 PF00994 Probable molybdopterin binding domain CpPA07_RS06400 PF02464 Competence-damaged protein CpPA07_RS06405 PF01066 CDP-alcohol phosphatidyltransferase CpPA07_RS06415 PF03741 Integral membrane protein TerC family CpPA07_RS06420 PF17854 FtsK alpha domain CpPA07_RS06420 PF09397 Ftsk gamma domain CpPA07_RS06420 PF01580 FtsK/SpoIIIE family CpPA07_RS06420 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CpPA07_RS06430 PF12706 Beta-lactamase superfamily domain CpPA07_RS06430 PF17770 Ribonuclease J C-terminal domain CpPA07_RS06430 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CpPA07_RS06435 PF00701 Dihydrodipicolinate synthetase family CpPA07_RS06440 PF02511 Thymidylate synthase complementing protein CpPA07_RS06445 PF01113 Dihydrodipicolinate reductase, N-terminus CpPA07_RS06445 PF05173 Dihydrodipicolinate reductase, C-terminus CpPA07_RS06450 PF00013 KH domain CpPA07_RS06450 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CpPA07_RS06450 PF01138 3' exoribonuclease family, domain 1 CpPA07_RS06450 PF00575 S1 RNA binding domain CpPA07_RS06455 PF00312 Ribosomal protein S15 CpPA07_RS06460 PF01156 Inosine-uridine preferring nucleoside hydrolase CpPA07_RS06465 PF01687 Riboflavin kinase CpPA07_RS06465 PF06574 FAD synthetase CpPA07_RS06470 PF01509 TruB family pseudouridylate synthase (N terminal domain) CpPA07_RS06470 PF16198 tRNA pseudouridylate synthase B C-terminal domain CpPA07_RS06470 PF09142 tRNA Pseudouridine synthase II, C terminal CpPA07_RS06475 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CpPA07_RS06475 PF01648 4'-phosphopantetheinyl transferase superfamily CpPA07_RS06480 PF00149 Calcineurin-like phosphoesterase CpPA07_RS06485 PF01554 MatE CpPA07_RS06495 PF02033 Ribosome-binding factor A CpPA07_RS06500 PF11987 Translation-initiation factor 2 CpPA07_RS06500 PF00009 Elongation factor Tu GTP binding domain CpPA07_RS06500 PF04760 Translation initiation factor IF-2, N-terminal region CpPA07_RS06510 PF08529 NusA N-terminal domain CpPA07_RS06510 PF13184 NusA-like KH domain CpPA07_RS06515 PF02576 RimP N-terminal domain CpPA07_RS06525 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CpPA07_RS06525 PF03129 Anticodon binding domain CpPA07_RS06525 PF04073 Aminoacyl-tRNA editing domain CpPA07_RS06530 PF03883 Peroxide stress protein YaaA CpPA07_RS06535 PF14824 Sirohaem biosynthesis protein central CpPA07_RS06535 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CpPA07_RS06535 PF10414 Sirohaem synthase dimerisation region CpPA07_RS06545 PF07683 Cobalamin synthesis protein cobW C-terminal domain CpPA07_RS06545 PF02492 CobW/HypB/UreG, nucleotide-binding domain CpPA07_RS06550 PF02805 Metal binding domain of Ada CpPA07_RS06550 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CpPA07_RS06550 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CpPA07_RS06550 PF12833 Helix-turn-helix domain CpPA07_RS06555 PF07685 CobB/CobQ-like glutamine amidotransferase domain CpPA07_RS06555 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CpPA07_RS06560 PF12557 Cob(I)alamin adenosyltransferase N terminal CpPA07_RS06560 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CpPA07_RS06565 PF13519 von Willebrand factor type A domain CpPA07_RS06565 PF17863 AAA lid domain CpPA07_RS06565 PF07728 AAA domain (dynein-related subfamily) CpPA07_RS06570 PF07728 AAA domain (dynein-related subfamily) CpPA07_RS06570 PF17863 AAA lid domain CpPA07_RS06570 PF13519 von Willebrand factor type A domain CpPA07_RS06575 PF06039 Malate:quinone oxidoreductase (Mqo) CpPA07_RS06585 PF07992 Pyridine nucleotide-disulphide oxidoreductase CpPA07_RS06585 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CpPA07_RS06595 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CpPA07_RS06595 PF07685 CobB/CobQ-like glutamine amidotransferase domain CpPA07_RS06600 PF00557 Metallopeptidase family M24 CpPA07_RS06610 PF04551 GcpE protein CpPA07_RS06615 PF02163 Peptidase family M50 CpPA07_RS06615 PF17820 PDZ domain CpPA07_RS06620 PF13288 DXP reductoisomerase C-terminal domain CpPA07_RS06620 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CpPA07_RS06620 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CpPA07_RS06630 PF10939 Protein of unknown function (DUF2631) CpPA07_RS06650 PF01765 Ribosome recycling factor CpPA07_RS06655 PF00696 Amino acid kinase family CpPA07_RS06660 PF00889 Elongation factor TS CpPA07_RS06665 PF00318 Ribosomal protein S2 CpPA07_RS06670 PF01551 Peptidase family M23 CpPA07_RS06675 PF00589 Phage integrase family CpPA07_RS06675 PF02899 Phage integrase, N-terminal SAM-like domain CpPA07_RS06680 PF17782 DprA winged helix domain CpPA07_RS06680 PF02481 DNA recombination-mediator protein A CpPA07_RS06685 PF01078 Magnesium chelatase, subunit ChlI CpPA07_RS06685 PF13335 Magnesium chelatase, subunit ChlI C-terminal CpPA07_RS06690 PF10611 Protein of unknown function (DUF2469) CpPA07_RS06695 PF01351 Ribonuclease HII CpPA07_RS06700 PF10502 Signal peptidase, peptidase S26 CpPA07_RS06705 PF01245 Ribosomal protein L19 CpPA07_RS06710 PF16921 Tex protein YqgF-like domain CpPA07_RS06710 PF17674 HHH domain CpPA07_RS06710 PF00575 S1 RNA binding domain CpPA07_RS06710 PF09371 Tex-like protein N-terminal domain CpPA07_RS06715 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CpPA07_RS06715 PF02378 Phosphotransferase system, EIIC CpPA07_RS06715 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CpPA07_RS06725 PF01746 tRNA (Guanine-1)-methyltransferase CpPA07_RS06730 PF05239 PRC-barrel domain CpPA07_RS06730 PF01782 RimM N-terminal domain CpPA07_RS06740 PF00886 Ribosomal protein S16 CpPA07_RS06745 PF02978 Signal peptide binding domain CpPA07_RS06745 PF02881 SRP54-type protein, helical bundle domain CpPA07_RS06745 PF00448 SRP54-type protein, GTPase domain CpPA07_RS06750 PF01966 HD domain CpPA07_RS06750 PF01909 Nucleotidyltransferase domain CpPA07_RS06755 PF00543 Nitrogen regulatory protein P-II CpPA07_RS06760 PF00448 SRP54-type protein, GTPase domain CpPA07_RS06760 PF02881 SRP54-type protein, helical bundle domain CpPA07_RS06770 PF06470 SMC proteins Flexible Hinge Domain CpPA07_RS06770 PF02463 RecF/RecN/SMC N terminal domain CpPA07_RS06775 PF00708 Acylphosphatase CpPA07_RS06780 PF01235 Sodium:alanine symporter family CpPA07_RS06785 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CpPA07_RS06785 PF06827 Zinc finger found in FPG and IleRS CpPA07_RS06785 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CpPA07_RS06790 PF00035 Double-stranded RNA binding motif CpPA07_RS06790 PF14622 Ribonuclease-III-like CpPA07_RS06795 PF02620 Large ribosomal RNA subunit accumulation protein YceD CpPA07_RS06810 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CpPA07_RS06810 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CpPA07_RS06815 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CpPA07_RS06815 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CpPA07_RS06820 PF02595 Glycerate kinase family CpPA07_RS06835 PF01546 Peptidase family M20/M25/M40 CpPA07_RS06835 PF07687 Peptidase dimerisation domain CpPA07_RS06845 PF00343 Carbohydrate phosphorylase CpPA07_RS06855 PF00224 Pyruvate kinase, barrel domain CpPA07_RS06855 PF02887 Pyruvate kinase, alpha/beta domain CpPA07_RS06860 PF01790 Prolipoprotein diacylglyceryl transferase CpPA07_RS06865 PF00218 Indole-3-glycerol phosphate synthase CpPA07_RS06875 PF01502 Phosphoribosyl-AMP cyclohydrolase CpPA07_RS06880 PF00977 Histidine biosynthesis protein CpPA07_RS06885 PF00459 Inositol monophosphatase family CpPA07_RS06890 PF00977 Histidine biosynthesis protein CpPA07_RS06895 PF00117 Glutamine amidotransferase class-I CpPA07_RS06910 PF00475 Imidazoleglycerol-phosphate dehydratase CpPA07_RS06915 PF00155 Aminotransferase class I and II CpPA07_RS06920 PF00815 Histidinol dehydrogenase CpPA07_RS06940 PF02909 Tetracyclin repressor-like, C-terminal domain CpPA07_RS06940 PF00440 Bacterial regulatory proteins, tetR family CpPA07_RS06945 PF00128 Alpha amylase, catalytic domain CpPA07_RS06945 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CpPA07_RS06950 PF07733 Bacterial DNA polymerase III alpha NTPase domain CpPA07_RS06950 PF00929 Exonuclease CpPA07_RS06950 PF02811 PHP domain CpPA07_RS06950 PF14579 Helix-hairpin-helix motif CpPA07_RS06950 PF14480 DNA polymerase III polC-type N-terminus I CpPA07_RS06950 PF11490 DNA polymerase III polC-type N-terminus II CpPA07_RS06950 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CpPA07_RS06975 PF01205 Uncharacterized protein family UPF0029 CpPA07_RS06975 PF09186 Domain of unknown function (DUF1949) CpPA07_RS06980 PF00585 C-terminal regulatory domain of Threonine dehydratase CpPA07_RS06980 PF00291 Pyridoxal-phosphate dependent enzyme CpPA07_RS06985 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CpPA07_RS06985 PF07733 Bacterial DNA polymerase III alpha NTPase domain CpPA07_RS06985 PF02811 PHP domain CpPA07_RS06985 PF14579 Helix-hairpin-helix motif CpPA07_RS06990 PF00892 EamA-like transporter family CpPA07_RS07000 PF00849 RNA pseudouridylate synthase CpPA07_RS07005 PF01252 Signal peptidase (SPase) II CpPA07_RS07020 PF17763 Glutaminase/Asparaginase C-terminal domain CpPA07_RS07020 PF00710 Asparaginase, N-terminal CpPA07_RS07025 PF00817 impB/mucB/samB family CpPA07_RS07025 PF11799 impB/mucB/samB family C-terminal domain CpPA07_RS07025 PF11798 IMS family HHH motif CpPA07_RS07030 PF08264 Anticodon-binding domain of tRNA CpPA07_RS07030 PF00133 tRNA synthetases class I (I, L, M and V) CpPA07_RS07040 PF05103 DivIVA protein CpPA07_RS07050 PF04472 Cell division protein SepF CpPA07_RS07060 PF02578 Multi-copper polyphenol oxidoreductase laccase CpPA07_RS07065 PF00091 Tubulin/FtsZ family, GTPase domain CpPA07_RS07065 PF12327 FtsZ family, C-terminal domain CpPA07_RS07075 PF01225 Mur ligase family, catalytic domain CpPA07_RS07075 PF08245 Mur ligase middle domain CpPA07_RS07075 PF02875 Mur ligase family, glutamate ligase domain CpPA07_RS07080 PF03033 Glycosyltransferase family 28 N-terminal domain CpPA07_RS07080 PF04101 Glycosyltransferase family 28 C-terminal domain CpPA07_RS07085 PF01098 Cell cycle protein CpPA07_RS07090 PF08245 Mur ligase middle domain CpPA07_RS07095 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CpPA07_RS07095 PF00953 Glycosyl transferase family 4 CpPA07_RS07100 PF01225 Mur ligase family, catalytic domain CpPA07_RS07100 PF02875 Mur ligase family, glutamate ligase domain CpPA07_RS07100 PF08245 Mur ligase middle domain CpPA07_RS07105 PF02875 Mur ligase family, glutamate ligase domain CpPA07_RS07105 PF08245 Mur ligase middle domain CpPA07_RS07105 PF01225 Mur ligase family, catalytic domain CpPA07_RS07110 PF03717 Penicillin-binding Protein dimerisation domain CpPA07_RS07110 PF00905 Penicillin binding protein transpeptidase domain CpPA07_RS07120 PF01795 MraW methylase family CpPA07_RS07125 PF02381 MraZ protein, putative antitoxin-like CpPA07_RS07150 PF02219 Methylenetetrahydrofolate reductase CpPA07_RS07155 PF00348 Polyprenyl synthetase CpPA07_RS07165 PF18367 Rv2175c C-terminal domain of unknown function CpPA07_RS07170 PF03793 PASTA domain CpPA07_RS07170 PF00069 Protein kinase domain CpPA07_RS07175 PF01474 Class-II DAHP synthetase family CpPA07_RS07180 PF16473 3' exoribonuclease, RNase T-like CpPA07_RS07195 PF00480 ROK family CpPA07_RS07200 PF13439 Glycosyltransferase Family 4 CpPA07_RS07200 PF00534 Glycosyl transferases group 1 CpPA07_RS07205 PF00877 NlpC/P60 family CpPA07_RS07210 PF00877 NlpC/P60 family CpPA07_RS07215 PF13631 Cytochrome b(N-terminal)/b6/petB CpPA07_RS07220 PF00355 Rieske [2Fe-2S] domain CpPA07_RS07225 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CpPA07_RS07225 PF00034 Cytochrome c CpPA07_RS07230 PF00510 Cytochrome c oxidase subunit III CpPA07_RS07235 PF12270 Cytochrome c oxidase subunit IV CpPA07_RS07240 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CpPA07_RS07245 PF13537 Glutamine amidotransferase domain CpPA07_RS07245 PF00733 Asparagine synthase CpPA07_RS07250 PF01521 Iron-sulphur cluster biosynthesis CpPA07_RS07255 PF11241 Protein of unknown function (DUF3043) CpPA07_RS07260 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CpPA07_RS07265 PF02277 Phosphoribosyltransferase CpPA07_RS07270 PF02654 Cobalamin-5-phosphate synthase CpPA07_RS07275 PF01063 Amino-transferase class IV CpPA07_RS07280 PF00883 Cytosol aminopeptidase family, catalytic domain CpPA07_RS07280 PF02789 Cytosol aminopeptidase family, N-terminal domain CpPA07_RS07290 PF00364 Biotin-requiring enzyme CpPA07_RS07290 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CpPA07_RS07290 PF02817 e3 binding domain CpPA07_RS07295 PF02347 Glycine cleavage system P-protein CpPA07_RS07300 PF08669 Glycine cleavage T-protein C-terminal barrel domain CpPA07_RS07300 PF01571 Aminomethyltransferase folate-binding domain CpPA07_RS07305 PF01597 Glycine cleavage H-protein CpPA07_RS07315 PF03099 Biotin/lipoate A/B protein ligase family CpPA07_RS07320 PF04055 Radical SAM superfamily CpPA07_RS07320 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CpPA07_RS07325 PF13829 Domain of unknown function (DUF4191) CpPA07_RS07335 PF03951 Glutamine synthetase, beta-Grasp domain CpPA07_RS07335 PF00120 Glutamine synthetase, catalytic domain CpPA07_RS07400 PF18273 Type III R-M EcoP15I C-terminal domain CpPA07_RS07400 PF01555 DNA methylase CpPA07_RS07445 PF12704 MacB-like periplasmic core domain CpPA07_RS07445 PF00005 ABC transporter CpPA07_RS07445 PF02687 FtsX-like permease family CpPA07_RS07470 PF00478 IMP dehydrogenase / GMP reductase domain CpPA07_RS07470 PF00571 CBS domain CpPA07_RS07480 PF03553 Na+/H+ antiporter family CpPA07_RS07480 PF13726 Na+-H+ antiporter family CpPA07_RS07485 PF00293 NUDIX domain CpPA07_RS07485 PF09297 NADH pyrophosphatase zinc ribbon domain CpPA07_RS07490 PF14821 Threonine synthase N terminus CpPA07_RS07490 PF00291 Pyridoxal-phosphate dependent enzyme CpPA07_RS07505 PF01126 Heme oxygenase CpPA07_RS07510 PF03710 Glutamate-ammonia ligase adenylyltransferase CpPA07_RS07510 PF08335 GlnD PII-uridylyltransferase CpPA07_RS07515 PF00120 Glutamine synthetase, catalytic domain CpPA07_RS07515 PF03951 Glutamine synthetase, beta-Grasp domain CpPA07_RS07525 PF01928 CYTH domain CpPA07_RS07525 PF05235 CHAD domain CpPA07_RS07540 PF08206 Ribonuclease B OB domain CpPA07_RS07540 PF00575 S1 RNA binding domain CpPA07_RS07540 PF00773 RNB domain CpPA07_RS07540 PF17876 Cold shock domain CpPA07_RS07550 PF00300 Histidine phosphatase superfamily (branch 1) CpPA07_RS07550 PF13456 Reverse transcriptase-like CpPA07_RS07560 PF01784 NIF3 (NGG1p interacting factor 3) CpPA07_RS07565 PF00155 Aminotransferase class I and II CpPA07_RS07575 PF01451 Low molecular weight phosphotyrosine protein phosphatase CpPA07_RS07580 PF02104 SURF1 family CpPA07_RS07585 PF17113 Regulatory signalling modulator protein AmpE CpPA07_RS07585 PF03186 CobD/Cbib protein CpPA07_RS07595 PF11253 Protein of unknown function (DUF3052) CpPA07_RS07600 PF17831 Pyruvate dehydrogenase E1 component middle domain CpPA07_RS07600 PF00456 Transketolase, thiamine diphosphate binding domain CpPA07_RS07605 PF12697 Alpha/beta hydrolase family CpPA07_RS07615 PF13344 Haloacid dehalogenase-like hydrolase CpPA07_RS07630 PF03458 UPF0126 domain CpPA07_RS07655 PF10410 DnaB-helicase binding domain of primase CpPA07_RS07655 PF08278 DNA primase DnaG DnaB-binding CpPA07_RS07655 PF01807 CHC2 zinc finger CpPA07_RS07655 PF08275 DNA primase catalytic core, N-terminal domain CpPA07_RS07655 PF13662 Toprim domain CpPA07_RS07660 PF01380 SIS domain CpPA07_RS07675 PF13286 Phosphohydrolase-associated domain CpPA07_RS07675 PF01966 HD domain CpPA07_RS07700 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CpPA07_RS07700 PF03129 Anticodon binding domain CpPA07_RS07710 PF01022 Bacterial regulatory protein, arsR family CpPA07_RS07715 PF01475 Ferric uptake regulator family CpPA07_RS07725 PF01255 Putative undecaprenyl diphosphate synthase CpPA07_RS07730 PF02565 Recombination protein O C terminal CpPA07_RS07730 PF11967 Recombination protein O N terminal CpPA07_RS07735 PF01926 50S ribosome-binding GTPase CpPA07_RS07735 PF07650 KH domain CpPA07_RS07740 PF08543 Phosphomethylpyrimidine kinase CpPA07_RS07745 PF00571 CBS domain CpPA07_RS07745 PF01595 Cyclin M transmembrane N-terminal domain CpPA07_RS07745 PF03471 Transporter associated domain CpPA07_RS07750 PF02130 Uncharacterized protein family UPF0054 CpPA07_RS07755 PF02562 PhoH-like protein CpPA07_RS07760 PF04452 RNA methyltransferase CpPA07_RS07765 PF00684 DnaJ central domain CpPA07_RS07765 PF01556 DnaJ C terminal domain CpPA07_RS07765 PF00226 DnaJ domain CpPA07_RS07770 PF01628 HrcA protein C terminal domain CpPA07_RS07775 PF04055 Radical SAM superfamily CpPA07_RS07785 PF00501 AMP-binding enzyme CpPA07_RS07790 PF02446 4-alpha-glucanotransferase CpPA07_RS07805 PF01432 Peptidase family M3 CpPA07_RS07810 PF00135 Carboxylesterase family CpPA07_RS07815 PF00293 NUDIX domain CpPA07_RS07835 PF00005 ABC transporter CpPA07_RS07835 PF00664 ABC transporter transmembrane region CpPA07_RS07840 PF05525 Branched-chain amino acid transport protein CpPA07_RS07845 PF00296 Luciferase-like monooxygenase CpPA07_RS07855 PF02028 BCCT, betaine/carnitine/choline family transporter CpPA07_RS07870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CpPA07_RS07875 PF00528 Binding-protein-dependent transport system inner membrane component CpPA07_RS07880 PF00528 Binding-protein-dependent transport system inner membrane component CpPA07_RS07880 PF12911 N-terminal TM domain of oligopeptide transport permease C CpPA07_RS07885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CpPA07_RS07885 PF00005 ABC transporter CpPA07_RS07890 PF00561 alpha/beta hydrolase fold CpPA07_RS07895 PF01168 Alanine racemase, N-terminal domain CpPA07_RS07900 PF04143 Sulphur transport CpPA07_RS07910 PF00528 Binding-protein-dependent transport system inner membrane component CpPA07_RS07910 PF12911 N-terminal TM domain of oligopeptide transport permease C CpPA07_RS07920 PF07690 Major Facilitator Superfamily CpPA07_RS07925 PF00005 ABC transporter CpPA07_RS07925 PF09383 NIL domain CpPA07_RS07930 PF00005 ABC transporter CpPA07_RS07930 PF09383 NIL domain CpPA07_RS07940 PF06421 GTP-binding protein LepA C-terminus CpPA07_RS07940 PF00009 Elongation factor Tu GTP binding domain CpPA07_RS07940 PF00679 Elongation factor G C-terminus CpPA07_RS07950 PF01649 Ribosomal protein S20 CpPA07_RS07955 PF01810 LysE type translocator CpPA07_RS07980 PF02645 Uncharacterised protein, DegV family COG1307 CpPA07_RS07985 PF00300 Histidine phosphatase superfamily (branch 1) CpPA07_RS07995 PF01467 Cytidylyltransferase-like CpPA07_RS08000 PF00171 Aldehyde dehydrogenase family CpPA07_RS08005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CpPA07_RS08010 PF04304 Protein of unknown function (DUF454) CpPA07_RS08015 PF02080 TrkA-C domain CpPA07_RS08015 PF06826 Predicted Permease Membrane Region CpPA07_RS08020 PF01472 PUA domain CpPA07_RS08020 PF00696 Amino acid kinase family CpPA07_RS08025 PF01018 GTP1/OBG CpPA07_RS08025 PF09269 Domain of unknown function (DUF1967) CpPA07_RS08025 PF01926 50S ribosome-binding GTPase CpPA07_RS08030 PF01016 Ribosomal L27 protein CpPA07_RS08035 PF00829 Ribosomal prokaryotic L21 protein CpPA07_RS08040 PF10150 Ribonuclease E/G family CpPA07_RS08050 PF00334 Nucleoside diphosphate kinase CpPA07_RS08055 PF02423 Ornithine cyclodeaminase/mu-crystallin family CpPA07_RS08065 PF02875 Mur ligase family, glutamate ligase domain CpPA07_RS08065 PF08245 Mur ligase middle domain CpPA07_RS08070 PF10458 Valyl tRNA synthetase tRNA binding arm CpPA07_RS08070 PF00133 tRNA synthetases class I (I, L, M and V) CpPA07_RS08070 PF08264 Anticodon-binding domain of tRNA CpPA07_RS08075 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CpPA07_RS08075 PF00056 lactate/malate dehydrogenase, NAD binding domain CpPA07_RS08085 PF06689 ClpX C4-type zinc finger CpPA07_RS08085 PF10431 C-terminal, D2-small domain, of ClpB protein CpPA07_RS08085 PF07724 AAA domain (Cdc48 subfamily) CpPA07_RS08090 PF00117 Glutamine amidotransferase class-I CpPA07_RS08090 PF04715 Anthranilate synthase component I, N terminal region CpPA07_RS08090 PF00425 chorismate binding enzyme CpPA07_RS08095 PF00574 Clp protease CpPA07_RS08100 PF00574 Clp protease CpPA07_RS08105 PF05697 Bacterial trigger factor protein (TF) CpPA07_RS08105 PF05698 Bacterial trigger factor protein (TF) C-terminus CpPA07_RS08130 PF02678 Pirin CpPA07_RS08130 PF05726 Pirin C-terminal cupin domain CpPA07_RS08135 PF02502 Ribose/Galactose Isomerase CpPA07_RS08140 PF01323 DSBA-like thioredoxin domain CpPA07_RS08145 PF01433 Peptidase family M1 domain CpPA07_RS08145 PF11838 ERAP1-like C-terminal domain CpPA07_RS08150 PF00924 Mechanosensitive ion channel CpPA07_RS08155 PF01152 Bacterial-like globin CpPA07_RS08175 PF12848 ABC transporter CpPA07_RS08175 PF00005 ABC transporter CpPA07_RS08230 PF00005 ABC transporter CpPA07_RS08235 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) CpPA07_RS08235 PF05425 Copper resistance protein D CpPA07_RS08240 PF02554 Carbon starvation protein CstA CpPA07_RS08240 PF13722 5TM C-terminal transporter carbon starvation CstA CpPA07_RS08255 PF01483 Proprotein convertase P-domain CpPA07_RS08255 PF00082 Subtilase family CpPA07_RS08260 PF08240 Alcohol dehydrogenase GroES-like domain CpPA07_RS08260 PF00107 Zinc-binding dehydrogenase CpPA07_RS08265 PF00106 short chain dehydrogenase CpPA07_RS08270 PF00929 Exonuclease CpPA07_RS08285 PF03734 L,D-transpeptidase catalytic domain CpPA07_RS08285 PF17964 Bacterial Ig domain CpPA07_RS08295 PF00107 Zinc-binding dehydrogenase CpPA07_RS08295 PF16884 N-terminal domain of oxidoreductase CpPA07_RS08300 PF00857 Isochorismatase family CpPA07_RS08315 PF00578 AhpC/TSA family CpPA07_RS08325 PF01648 4'-phosphopantetheinyl transferase superfamily CpPA07_RS08330 PF02801 Beta-ketoacyl synthase, C-terminal domain CpPA07_RS08330 PF00109 Beta-ketoacyl synthase, N-terminal domain CpPA07_RS08345 PF00196 Bacterial regulatory proteins, luxR family CpPA07_RS08345 PF00072 Response regulator receiver domain CpPA07_RS08350 PF07786 Protein of unknown function (DUF1624) CpPA07_RS08350 PF04235 Protein of unknown function (DUF418) CpPA07_RS08385 PF01725 Ham1 family CpPA07_RS08390 PF03725 3' exoribonuclease family, domain 2 CpPA07_RS08390 PF01138 3' exoribonuclease family, domain 1 CpPA07_RS08395 PF12706 Beta-lactamase superfamily domain CpPA07_RS08400 PF01177 Asp/Glu/Hydantoin racemase CpPA07_RS08405 PF01694 Rhomboid family CpPA07_RS08410 PF09438 Domain of unknown function (DUF2017) CpPA07_RS08415 PF02617 ATP-dependent Clp protease adaptor protein ClpS CpPA07_RS08420 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CpPA07_RS08420 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CpPA07_RS08425 PF13307 Helicase C-terminal domain CpPA07_RS08455 PF00115 Cytochrome C and Quinol oxidase polypeptide I CpPA07_RS08465 PF00268 Ribonucleotide reductase, small chain CpPA07_RS08470 PF00210 Ferritin-like domain CpPA07_RS08475 PF08343 Ribonucleotide reductase N-terminal CpPA07_RS08475 PF00317 Ribonucleotide reductase, all-alpha domain CpPA07_RS08475 PF02867 Ribonucleotide reductase, barrel domain CpPA07_RS08480 PF07972 NrdI Flavodoxin like CpPA07_RS08485 PF00462 Glutaredoxin CpPA07_RS08490 PF00444 Ribosomal protein L36 CpPA07_RS08495 PF02540 NAD synthase CpPA07_RS08510 PF01022 Bacterial regulatory protein, arsR family CpPA07_RS08515 PF04945 YHS domain CpPA07_RS08565 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CpPA07_RS08565 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CpPA07_RS08565 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CpPA07_RS08565 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CpPA07_RS08570 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CpPA07_RS08575 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CpPA07_RS08580 PF12704 MacB-like periplasmic core domain CpPA07_RS08580 PF02687 FtsX-like permease family CpPA07_RS08580 PF00005 ABC transporter CpPA07_RS08585 PF02687 FtsX-like permease family CpPA07_RS08585 PF12704 MacB-like periplasmic core domain CpPA07_RS08585 PF00005 ABC transporter CpPA07_RS08610 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CpPA07_RS08615 PF01923 Cobalamin adenosyltransferase CpPA07_RS08620 PF00196 Bacterial regulatory proteins, luxR family CpPA07_RS08620 PF13185 GAF domain CpPA07_RS08630 PF00291 Pyridoxal-phosphate dependent enzyme CpPA07_RS08635 PF00132 Bacterial transferase hexapeptide (six repeats) CpPA07_RS08635 PF06426 Serine acetyltransferase, N-terminal CpPA07_RS08655 PF00465 Iron-containing alcohol dehydrogenase CpPA07_RS08675 PF01654 Cytochrome bd terminal oxidase subunit I CpPA07_RS08680 PF02322 Cytochrome bd terminal oxidase subunit II CpPA07_RS08685 PF00005 ABC transporter CpPA07_RS08685 PF00664 ABC transporter transmembrane region CpPA07_RS08690 PF00005 ABC transporter CpPA07_RS08695 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CpPA07_RS08695 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CpPA07_RS08700 PF01207 Dihydrouridine synthase (Dus) CpPA07_RS08705 PF01895 PhoU domain CpPA07_RS08715 PF00005 ABC transporter CpPA07_RS08725 PF00528 Binding-protein-dependent transport system inner membrane component CpPA07_RS08730 PF12849 PBP superfamily domain CpPA07_RS08735 PF00583 Acetyltransferase (GNAT) family CpPA07_RS08745 PF00781 Diacylglycerol kinase catalytic domain CpPA07_RS08750 PF08768 Domain of unknown function (DUF1794) CpPA07_RS08770 PF00586 AIR synthase related protein, N-terminal domain CpPA07_RS08770 PF02769 AIR synthase related protein, C-terminal domain CpPA07_RS08775 PF00156 Phosphoribosyl transferase domain CpPA07_RS08785 PF07972 NrdI Flavodoxin like CpPA07_RS08790 PF00268 Ribonucleotide reductase, small chain CpPA07_RS08795 PF03006 Haemolysin-III related CpPA07_RS08800 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CpPA07_RS08800 PF02769 AIR synthase related protein, C-terminal domain CpPA07_RS08800 PF00586 AIR synthase related protein, N-terminal domain CpPA07_RS08810 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CpPA07_RS08815 PF00255 Glutathione peroxidase CpPA07_RS08820 PF00326 Prolyl oligopeptidase family CpPA07_RS08820 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CpPA07_RS08830 PF01259 SAICAR synthetase CpPA07_RS08835 PF10397 Adenylosuccinate lyase C-terminus CpPA07_RS08835 PF00206 Lyase CpPA07_RS08840 PF02254 TrkA-N domain CpPA07_RS08840 PF02080 TrkA-C domain CpPA07_RS08845 PF02386 Cation transport protein CpPA07_RS08850 PF02844 Phosphoribosylglycinamide synthetase, N domain CpPA07_RS08850 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CpPA07_RS08850 PF02843 Phosphoribosylglycinamide synthetase, C domain CpPA07_RS08855 PF01230 HIT domain CpPA07_RS08865 PF00512 His Kinase A (phospho-acceptor) domain CpPA07_RS08865 PF00672 HAMP domain CpPA07_RS08865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CpPA07_RS08870 PF00072 Response regulator receiver domain CpPA07_RS08870 PF00486 Transcriptional regulatory protein, C terminal CpPA07_RS08900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CpPA07_RS08900 PF00205 Thiamine pyrophosphate enzyme, central domain CpPA07_RS08900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CpPA07_RS08935 PF00982 Glycosyltransferase family 20 CpPA07_RS08950 PF00356 Bacterial regulatory proteins, lacI family CpPA07_RS08960 PF00588 SpoU rRNA Methylase family CpPA07_RS08960 PF08032 RNA 2'-O ribose methyltransferase substrate binding CpPA07_RS08965 PF01406 tRNA synthetases class I (C) catalytic domain CpPA07_RS08965 PF09190 DALR domain CpPA07_RS08970 PF02542 YgbB family CpPA07_RS08975 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CpPA07_RS08980 PF02559 CarD-like/TRCF domain CpPA07_RS09000 PF06745 KaiC CpPA07_RS09000 PF18073 Rubredoxin metal binding domain CpPA07_RS09010 PF00484 Carbonic anhydrase CpPA07_RS09015 PF00633 Helix-hairpin-helix motif CpPA07_RS09015 PF00730 HhH-GPD superfamily base excision DNA repair protein CpPA07_RS09030 PF00004 ATPase family associated with various cellular activities (AAA) CpPA07_RS09030 PF07724 AAA domain (Cdc48 subfamily) CpPA07_RS09030 PF17871 AAA lid domain CpPA07_RS09030 PF02861 Clp amino terminal domain, pathogenicity island component CpPA07_RS09030 PF10431 C-terminal, D2-small domain, of ClpB protein CpPA07_RS09040 PF07690 Major Facilitator Superfamily CpPA07_RS09045 PF01156 Inosine-uridine preferring nucleoside hydrolase CpPA07_RS09060 PF00152 tRNA synthetases class II (D, K and N) CpPA07_RS09060 PF01336 OB-fold nucleic acid binding domain CpPA07_RS09075 PF00375 Sodium:dicarboxylate symporter family CpPA07_RS09080 PF00171 Aldehyde dehydrogenase family CpPA07_RS09085 PF02028 BCCT, betaine/carnitine/choline family transporter CpPA07_RS09090 PF05199 GMC oxidoreductase CpPA07_RS09090 PF00732 GMC oxidoreductase CpPA07_RS09095 PF02569 Pantoate-beta-alanine ligase CpPA07_RS09115 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CpPA07_RS09120 PF02152 Dihydroneopterin aldolase CpPA07_RS09125 PF00809 Pterin binding enzyme CpPA07_RS09130 PF01227 GTP cyclohydrolase I CpPA07_RS09135 PF00004 ATPase family associated with various cellular activities (AAA) CpPA07_RS09135 PF17862 AAA+ lid domain CpPA07_RS09135 PF01434 Peptidase family M41 CpPA07_RS09140 PF00156 Phosphoribosyl transferase domain CpPA07_RS09145 PF09179 TilS substrate binding domain CpPA07_RS09145 PF01171 PP-loop family CpPA07_RS09150 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CpPA07_RS09155 PF00719 Inorganic pyrophosphatase CpPA07_RS09160 PF00581 Rhodanese-like domain CpPA07_RS09160 PF01206 Sulfurtransferase TusA CpPA07_RS09165 PF00375 Sodium:dicarboxylate symporter family CpPA07_RS09185 PF13193 AMP-binding enzyme C-terminal domain CpPA07_RS09185 PF00550 Phosphopantetheine attachment site CpPA07_RS09185 PF00668 Condensation domain CpPA07_RS09185 PF00501 AMP-binding enzyme CpPA07_RS09190 PF03976 Polyphosphate kinase 2 (PPK2) CpPA07_RS09205 PF00118 TCP-1/cpn60 chaperonin family CpPA07_RS09210 PF07687 Peptidase dimerisation domain CpPA07_RS09210 PF01546 Peptidase family M20/M25/M40 CpPA07_RS09235 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CpPA07_RS09235 PF00361 Proton-conducting membrane transporter CpPA07_RS09235 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CpPA07_RS09235 PF13244 Domain of unknown function (DUF4040) CpPA07_RS09240 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CpPA07_RS09245 PF00361 Proton-conducting membrane transporter CpPA07_RS09265 PF09594 Glycosyltransferase family 87 CpPA07_RS09270 PF04107 Glutamate-cysteine ligase family 2(GCS2) CpPA07_RS09285 PF01327 Polypeptide deformylase CpPA07_RS09290 PF00583 Acetyltransferase (GNAT) family CpPA07_RS09295 PF03372 Endonuclease/Exonuclease/phosphatase family CpPA07_RS09300 PF13091 PLD-like domain CpPA07_RS09300 PF13396 Phospholipase_D-nuclease N-terminal CpPA07_RS09310 PF00005 ABC transporter CpPA07_RS09315 PF00293 NUDIX domain CpPA07_RS09325 PF00497 Bacterial extracellular solute-binding proteins, family 3 CpPA07_RS09330 PF16918 Protein kinase G tetratricopeptide repeat CpPA07_RS09330 PF16919 Protein kinase G rubredoxin domain CpPA07_RS09330 PF00069 Protein kinase domain CpPA07_RS09335 PF00871 Acetokinase family CpPA07_RS09340 PF01515 Phosphate acetyl/butaryl transferase CpPA07_RS09345 PF07992 Pyridine nucleotide-disulphide oxidoreductase CpPA07_RS09360 PF02222 ATP-grasp domain CpPA07_RS09365 PF00156 Phosphoribosyl transferase domain CpPA07_RS09395 PF01578 Cytochrome C assembly protein CpPA07_RS09400 PF05140 ResB-like family CpPA07_RS09410 PF02335 Cytochrome c552 CpPA07_RS09415 PF03264 NapC/NirT cytochrome c family, N-terminal region CpPA07_RS09420 PF00709 Adenylosuccinate synthetase CpPA07_RS09450 PF00005 ABC transporter CpPA07_RS09470 PF17210 SdrD B-like domain CpPA07_RS09470 PF00746 LPXTG cell wall anchor motif CpPA07_RS09470 PF17961 Bacterial Ig domain CpPA07_RS09470 PF04650 YSIRK type signal peptide CpPA07_RS09470 PF10425 C-terminus of bacterial fibrinogen-binding adhesin CpPA07_RS09475 PF01116 Fructose-bisphosphate aldolase class-II CpPA07_RS09490 PF00156 Phosphoribosyl transferase domain CpPA07_RS09500 PF00581 Rhodanese-like domain CpPA07_RS09505 PF01266 FAD dependent oxidoreductase CpPA07_RS09505 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CpPA07_RS09540 PF17871 AAA lid domain CpPA07_RS09540 PF00004 ATPase family associated with various cellular activities (AAA) CpPA07_RS09540 PF07724 AAA domain (Cdc48 subfamily) CpPA07_RS09540 PF10431 C-terminal, D2-small domain, of ClpB protein CpPA07_RS09540 PF02861 Clp amino terminal domain, pathogenicity island component CpPA07_RS09545 PF00005 ABC transporter CpPA07_RS09595 PF12704 MacB-like periplasmic core domain CpPA07_RS09595 PF02687 FtsX-like permease family CpPA07_RS09595 PF00005 ABC transporter CpPA07_RS09600 PF00005 ABC transporter CpPA07_RS09605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CpPA07_RS09610 PF00795 Carbon-nitrogen hydrolase CpPA07_RS09625 PF00107 Zinc-binding dehydrogenase CpPA07_RS09625 PF08240 Alcohol dehydrogenase GroES-like domain CpPA07_RS09645 PF13411 MerR HTH family regulatory protein CpPA07_RS09650 PF00684 DnaJ central domain CpPA07_RS09650 PF00226 DnaJ domain CpPA07_RS09650 PF01556 DnaJ C terminal domain CpPA07_RS09655 PF01025 GrpE CpPA07_RS09660 PF00012 Hsp70 protein CpPA07_RS09680 PF01594 AI-2E family transporter CpPA07_RS09685 PF00005 ABC transporter CpPA07_RS09705 PF01384 Phosphate transporter family CpPA07_RS09715 PF02665 Nitrate reductase gamma subunit CpPA07_RS09715 PF13183 4Fe-4S dicluster domain CpPA07_RS09715 PF02754 Cysteine-rich domain CpPA07_RS09730 PF00005 ABC transporter CpPA07_RS09735 PF01032 FecCD transport family CpPA07_RS09745 PF01774 UreD urease accessory protein CpPA07_RS09750 PF02492 CobW/HypB/UreG, nucleotide-binding domain CpPA07_RS09760 PF02814 UreE urease accessory protein, N-terminal domain CpPA07_RS09760 PF05194 UreE urease accessory protein, C-terminal domain CpPA07_RS09765 PF01979 Amidohydrolase family CpPA07_RS09765 PF00449 Urease alpha-subunit, N-terminal domain CpPA07_RS09770 PF00699 Urease beta subunit CpPA07_RS09775 PF00547 Urease, gamma subunit CpPA07_RS09790 PF00155 Aminotransferase class I and II CpPA07_RS09800 PF09924 Uncharacterised conserved protein (DUF2156) CpPA07_RS09800 PF00152 tRNA synthetases class II (D, K and N) CpPA07_RS09800 PF16995 Transmembrane region of lysyl-tRNA synthetase CpPA07_RS09800 PF01336 OB-fold nucleic acid binding domain CpPA07_RS09805 PF12697 Alpha/beta hydrolase family CpPA07_RS09815 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CpPA07_RS09815 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CpPA07_RS09815 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CpPA07_RS09820 PF00692 dUTPase CpPA07_RS09830 PF00171 Aldehyde dehydrogenase family CpPA07_RS09840 PF00933 Glycosyl hydrolase family 3 N terminal domain CpPA07_RS09850 PF11847 Alpha-(1->3)-arabinofuranosyltransferase CpPA07_RS09855 PF01757 Acyltransferase family CpPA07_RS09860 PF11271 Porin PorA CpPA07_RS09870 PF00534 Glycosyl transferases group 1 CpPA07_RS09870 PF13439 Glycosyltransferase Family 4 CpPA07_RS09875 PF08241 Methyltransferase domain CpPA07_RS09880 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CpPA07_RS09880 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CpPA07_RS09885 PF02390 Putative methyltransferase CpPA07_RS09895 PF03176 MMPL family CpPA07_RS09915 PF09335 SNARE associated Golgi protein CpPA07_RS09920 PF01039 Carboxyl transferase domain CpPA07_RS09925 PF00698 Acyl transferase domain CpPA07_RS09925 PF16197 Ketoacyl-synthetase C-terminal extension CpPA07_RS09925 PF02801 Beta-ketoacyl synthase, C-terminal domain CpPA07_RS09925 PF00550 Phosphopantetheine attachment site CpPA07_RS09925 PF00975 Thioesterase domain CpPA07_RS09925 PF00109 Beta-ketoacyl synthase, N-terminal domain CpPA07_RS09930 PF00501 AMP-binding enzyme CpPA07_RS09935 PF01083 Cutinase CpPA07_RS09945 PF08310 LGFP repeat CpPA07_RS09945 PF00756 Putative esterase CpPA07_RS09955 PF00756 Putative esterase CpPA07_RS09965 PF01040 UbiA prenyltransferase family CpPA07_RS09970 PF01569 PAP2 superfamily CpPA07_RS09975 PF17994 Galactofuranosyltransferase 2 N-terminal CpPA07_RS09985 PF01569 PAP2 superfamily CpPA07_RS09995 PF03009 Glycerophosphoryl diester phosphodiesterase family CpPA07_RS10000 PF07690 Major Facilitator Superfamily CpPA07_RS10005 PF03275 UDP-galactopyranose mutase CpPA07_RS10010 PF00005 ABC transporter CpPA07_RS10015 PF01032 FecCD transport family CpPA07_RS10020 PF01497 Periplasmic binding protein CpPA07_RS10040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CpPA07_RS10040 PF02403 Seryl-tRNA synthetase N-terminal domain CpPA07_RS10045 PF00392 Bacterial regulatory proteins, gntR family CpPA07_RS10045 PF07702 UTRA domain CpPA07_RS10070 PF01425 Amidase CpPA07_RS10080 PF03816 Cell envelope-related transcriptional attenuator domain CpPA07_RS10105 PF03009 Glycerophosphoryl diester phosphodiesterase family CpPA07_RS10110 PF07670 Nucleoside recognition CpPA07_RS10110 PF07662 Na+ dependent nucleoside transporter C-terminus CpPA07_RS10110 PF01773 Na+ dependent nucleoside transporter N-terminus CpPA07_RS10115 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CpPA07_RS10120 PF00591 Glycosyl transferase family, a/b domain CpPA07_RS10120 PF02885 Glycosyl transferase family, helical bundle domain CpPA07_RS10120 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CpPA07_RS10125 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CpPA07_RS10125 PF00056 lactate/malate dehydrogenase, NAD binding domain CpPA07_RS10130 PF01625 Peptide methionine sulfoxide reductase CpPA07_RS10135 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CpPA07_RS10135 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CpPA07_RS10140 PF03358 NADPH-dependent FMN reductase CpPA07_RS10145 PF07690 Major Facilitator Superfamily CpPA07_RS10165 PF07690 Major Facilitator Superfamily CpPA07_RS10180 PF09594 Glycosyltransferase family 87 CpPA07_RS10200 PF00072 Response regulator receiver domain CpPA07_RS10200 PF00196 Bacterial regulatory proteins, luxR family CpPA07_RS10205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CpPA07_RS10205 PF07730 Histidine kinase CpPA07_RS10220 PF04203 Sortase domain CpPA07_RS10225 PF02096 60Kd inner membrane protein CpPA07_RS10245 PF00582 Universal stress protein family CpPA07_RS10250 PF01479 S4 domain CpPA07_RS10250 PF00849 RNA pseudouridylate synthase CpPA07_RS10280 PF00005 ABC transporter CpPA07_RS10295 PF04012 PspA/IM30 family CpPA07_RS10300 PF00085 Thioredoxin CpPA07_RS10310 PF00403 Heavy-metal-associated domain CpPA07_RS10315 PF07690 Major Facilitator Superfamily CpPA07_RS10320 PF03796 DnaB-like helicase C terminal domain CpPA07_RS10320 PF00772 DnaB-like helicase N terminal domain CpPA07_RS10325 PF00723 Glycosyl hydrolases family 15 CpPA07_RS10335 PF01281 Ribosomal protein L9, N-terminal domain CpPA07_RS10335 PF03948 Ribosomal protein L9, C-terminal domain CpPA07_RS10340 PF00436 Single-strand binding protein family CpPA07_RS10345 PF01250 Ribosomal protein S6 CpPA07_RS10365 PF00912 Transglycosylase CpPA07_RS10365 PF00905 Penicillin binding protein transpeptidase domain CpPA07_RS10380 PF00582 Universal stress protein family CpPA07_RS10395 PF17773 UPF0176 acylphosphatase like domain CpPA07_RS10395 PF12368 Rhodanase C-terminal CpPA07_RS10400 PF09335 SNARE associated Golgi protein CpPA07_RS10405 PF00210 Ferritin-like domain CpPA07_RS10410 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CpPA07_RS10410 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CpPA07_RS10415 PF01256 Carbohydrate kinase CpPA07_RS10415 PF03853 YjeF-related protein N-terminus CpPA07_RS10420 PF04892 VanZ like family CpPA07_RS10430 PF13603 Leucyl-tRNA synthetase, Domain 2 CpPA07_RS10430 PF08264 Anticodon-binding domain of tRNA CpPA07_RS10430 PF09334 tRNA synthetases class I (M) CpPA07_RS10435 PF00005 ABC transporter CpPA07_RS10435 PF02687 FtsX-like permease family CpPA07_RS10435 PF12704 MacB-like periplasmic core domain CpPA07_RS10440 PF02687 FtsX-like permease family CpPA07_RS10455 PF07730 Histidine kinase CpPA07_RS10455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CpPA07_RS10460 PF00072 Response regulator receiver domain CpPA07_RS10460 PF00196 Bacterial regulatory proteins, luxR family CpPA07_RS10470 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CpPA07_RS10475 PF01979 Amidohydrolase family CpPA07_RS10480 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CpPA07_RS10485 PF00480 ROK family CpPA07_RS10490 PF07729 FCD domain CpPA07_RS10490 PF00392 Bacterial regulatory proteins, gntR family CpPA07_RS10495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CpPA07_RS10500 PF00528 Binding-protein-dependent transport system inner membrane component CpPA07_RS10505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CpPA07_RS10505 PF00005 ABC transporter CpPA07_RS10510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CpPA07_RS10510 PF00005 ABC transporter CpPA07_RS10515 PF00701 Dihydrodipicolinate synthetase family CpPA07_RS10550 PF08903 Domain of unknown function (DUF1846) CpPA07_RS10555 PF07411 Domain of unknown function (DUF1508) CpPA07_RS10570 PF00375 Sodium:dicarboxylate symporter family CpPA07_RS10580 PF01593 Flavin containing amine oxidoreductase CpPA07_RS10590 PF04715 Anthranilate synthase component I, N terminal region CpPA07_RS10590 PF00425 chorismate binding enzyme CpPA07_RS10595 PF00117 Glutamine amidotransferase class-I CpPA07_RS10600 PF02885 Glycosyl transferase family, helical bundle domain CpPA07_RS10600 PF00591 Glycosyl transferase family, a/b domain CpPA07_RS10605 PF00218 Indole-3-glycerol phosphate synthase CpPA07_RS10605 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CpPA07_RS10615 PF00291 Pyridoxal-phosphate dependent enzyme CpPA07_RS10620 PF00290 Tryptophan synthase alpha chain CpPA07_RS10630 PF13593 SBF-like CPA transporter family (DUF4137) CpPA07_RS10640 PF05437 Branched-chain amino acid transport protein (AzlD) CpPA07_RS10645 PF03591 AzlC protein CpPA07_RS10650 PF02622 Uncharacterized ACR, COG1678 CpPA07_RS10655 PF01743 Poly A polymerase head domain CpPA07_RS10655 PF13735 tRNA nucleotidyltransferase domain 2 putative CpPA07_RS10655 PF12627 Probable RNA and SrmB- binding site of polymerase A CpPA07_RS10660 PF00293 NUDIX domain CpPA07_RS10670 PF03023 Lipid II flippase MurJ CpPA07_RS10675 PF08281 Sigma-70, region 4 CpPA07_RS10675 PF04542 Sigma-70 region 2 CpPA07_RS10680 PF07992 Pyridine nucleotide-disulphide oxidoreductase CpPA07_RS10685 PF00085 Thioredoxin CpPA07_RS10690 PF01471 Putative peptidoglycan binding domain CpPA07_RS10690 PF01520 N-acetylmuramoyl-L-alanine amidase CpPA07_RS10700 PF17762 HTH domain found in ParB protein CpPA07_RS10700 PF02195 ParB-like nuclease domain CpPA07_RS10705 PF13614 AAA domain CpPA07_RS10710 PF02527 rRNA small subunit methyltransferase G CpPA07_RS10715 PF02096 60Kd inner membrane protein CpPA07_RS10720 PF01809 Putative membrane protein insertion efficiency factor CpPA07_RS10725 PF00825 Ribonuclease P CpPA07_RS10730 PF00468 Ribosomal protein L34