CpPA07_RS00005	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
CpPA07_RS00010	SM00480	DNA polymerase III beta subunit
CpPA07_RS00025	SM00387	Histidine kinase-like ATPases
CpPA07_RS00025	SM00433	TopoisomeraseII
CpPA07_RS00045	SM00434	DNA Topoisomerase IV
CpPA07_RS00095	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS00135	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS00160	SM00220	Serine/Threonine protein kinases, catalytic domain
CpPA07_RS00160	SM00740	CpPA07_RS00160
CpPA07_RS00165	SM00220	Serine/Threonine protein kinases, catalytic domain
CpPA07_RS00180	SM00331	Sigma factor PP2C-like phosphatases
CpPA07_RS00180	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CpPA07_RS00185	SM00240	Forkhead associated domain
CpPA07_RS00190	SM00240	Forkhead associated domain
CpPA07_RS00220	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS00230	SM00924	MgtE intracellular N domain
CpPA07_RS00235	SM00642	Alpha-amylase domain
CpPA07_RS00290	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS00305	SM00729	Elongator protein 3, MiaB family, Radical SAM
CpPA07_RS00305	SM00876	Biotin and Thiamin Synthesis associated domain
CpPA07_RS00330	SM00641	Glycosyl hydrolases family 25
CpPA07_RS00380	SM00347	helix_turn_helix multiple antibiotic resistance protein
CpPA07_RS00420	SM00487	DEAD-like helicases superfamily
CpPA07_RS00420	SM00490	helicase superfamily c-terminal domain
CpPA07_RS00420	SM00847	Helicase associated domain (HA2)  Add an annotation
CpPA07_RS00435	SM00822	CpPA07_RS00435
CpPA07_RS00465	SM00507	HNH nucleases
CpPA07_RS00560	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS00580	SM00014	Acid phosphatase homologues
CpPA07_RS00585	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS00600	SM00829	Enoylreductase
CpPA07_RS00635	SM01061	CAT RNA binding domain
CpPA07_RS00670	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CpPA07_RS00730	SM00829	Enoylreductase
CpPA07_RS00760	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS00770	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CpPA07_RS00770	SM00493	CpPA07_RS00770
CpPA07_RS00790	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CpPA07_RS00790	SM00895	CpPA07_RS00790
CpPA07_RS00825	SM00917	LeuA allosteric (dimerisation) domain
CpPA07_RS00845	SM01133	CpPA07_RS00845
CpPA07_RS00890	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CpPA07_RS00900	SM01060	CpPA07_RS00900
CpPA07_RS00930	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS00950	SM00448	cheY-homologous receiver domain
CpPA07_RS00950	SM00862	Transcriptional regulatory protein, C terminal
CpPA07_RS01005	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS01055	SM00849	Metallo-beta-lactamase superfamily
CpPA07_RS01060	SM00100	Cyclic nucleotide-monophosphate binding domain
CpPA07_RS01060	SM00419	helix_turn_helix, cAMP Regulatory protein
CpPA07_RS01070	SM00478	endonuclease III
CpPA07_RS01070	SM00525	CpPA07_RS01070
CpPA07_RS01150	SM00487	DEAD-like helicases superfamily
CpPA07_RS01150	SM00490	helicase superfamily c-terminal domain
CpPA07_RS01155	SM00357	Cold shock protein domain
CpPA07_RS01160	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CpPA07_RS01160	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CpPA07_RS01160	SM00493	CpPA07_RS01160
CpPA07_RS01170	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CpPA07_RS01170	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CpPA07_RS01240	SM00530	Helix-turn-helix XRE-family like proteins 
CpPA07_RS01325	SM00855	Phosphoglycerate mutase family
CpPA07_RS01330	SM00387	Histidine kinase-like ATPases
CpPA07_RS01330	SM00388	His Kinase A (phosphoacceptor) domain
CpPA07_RS01335	SM00448	cheY-homologous receiver domain
CpPA07_RS01335	SM00862	Transcriptional regulatory protein, C terminal
CpPA07_RS01370	SM01155	CpPA07_RS01370
CpPA07_RS01410	SM01004	Delta-aminolevulinic acid dehydratase
CpPA07_RS01445	SM00855	Phosphoglycerate mutase family
CpPA07_RS01470	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS01520	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CpPA07_RS01585	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CpPA07_RS01590	SM00649	Ribosomal protein L11/L12
CpPA07_RS01640	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS01665	SM00663	RNA polymerase I subunit A N-terminus
CpPA07_RS01675	SM00421	helix_turn_helix, Lux Regulon
CpPA07_RS01675	SM00448	cheY-homologous receiver domain
CpPA07_RS01685	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS01730	SM00838	Elongation factor G C-terminus
CpPA07_RS01730	SM00889	Elongation factor G, domain IV
CpPA07_RS01780	SM01403	CpPA07_RS01780
CpPA07_RS01800	SM01382	CpPA07_RS01800
CpPA07_RS01800	SM01383	CpPA07_RS01800
CpPA07_RS01815	SM00322	K homology RNA-binding domain
CpPA07_RS01840	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS01855	SM01374	CpPA07_RS01855
CpPA07_RS01860	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CpPA07_RS01880	SM00870	CpPA07_RS01880
CpPA07_RS01885	SM00014	Acid phosphatase homologues
CpPA07_RS01960	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS01995	SM00316	Ribosomal protein S1-like RNA-binding domain
CpPA07_RS02010	SM00363	S4 RNA-binding domain
CpPA07_RS02010	SM01390	CpPA07_RS02010
CpPA07_RS02015	SM00662	RNA polymerases D
CpPA07_RS02110	SM01005	Alanine racemase, C-terminal domain
CpPA07_RS02145	SM00883	Chaperonin 10 Kd subunit
CpPA07_RS02175	SM00116	Domain in cystathionine beta-synthase and other proteins.
CpPA07_RS02175	SM01240	CpPA07_RS02175
CpPA07_RS02180	SM01240	CpPA07_RS02180
CpPA07_RS02210	SM00421	helix_turn_helix, Lux Regulon
CpPA07_RS02210	SM00448	cheY-homologous receiver domain
CpPA07_RS02230	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS02265	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS02280	SM00529	Helix-turn-helix diphteria tox regulatory element
CpPA07_RS02280	SM00899	CpPA07_RS02280
CpPA07_RS02300	SM00507	HNH nucleases
CpPA07_RS02330	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS02355	SM00422	helix_turn_helix, mercury resistance
CpPA07_RS02410	SM00530	Helix-turn-helix XRE-family like proteins 
CpPA07_RS02430	SM00878	Biotin carboxylase C-terminal domain
CpPA07_RS02445	SM00878	Biotin carboxylase C-terminal domain
CpPA07_RS02450	SM00450	Rhodanese Homology Domain
CpPA07_RS02480	SM00354	helix_turn _helix lactose operon repressor
CpPA07_RS02515	SM01001	AIR carboxylase
CpPA07_RS02610	SM00996	S-adenosyl-L-homocysteine hydrolase
CpPA07_RS02610	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CpPA07_RS02620	SM00448	cheY-homologous receiver domain
CpPA07_RS02620	SM00862	Transcriptional regulatory protein, C terminal
CpPA07_RS02625	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CpPA07_RS02625	SM00387	Histidine kinase-like ATPases
CpPA07_RS02625	SM00388	His Kinase A (phosphoacceptor) domain
CpPA07_RS02630	SM00909	Sporulation and spore germination
CpPA07_RS02645	SM00957	SecA DEAD-like domain
CpPA07_RS02645	SM00958	SecA preprotein cross-linking domain
CpPA07_RS02730	SM00487	DEAD-like helicases superfamily
CpPA07_RS02730	SM00490	helicase superfamily c-terminal domain
CpPA07_RS02770	SM00341	Helicase and RNase D C-terminal
CpPA07_RS02790	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CpPA07_RS02870	SM00823	Phosphopantetheine attachment site
CpPA07_RS02925	SM00937	CpPA07_RS02925
CpPA07_RS02945	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS02965	SM00947	Carbonic anhydrase
CpPA07_RS02990	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS03025	SM00487	DEAD-like helicases superfamily
CpPA07_RS03025	SM00490	helicase superfamily c-terminal domain
CpPA07_RS03040	SM00357	Cold shock protein domain
CpPA07_RS03185	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS03235	SM00487	DEAD-like helicases superfamily
CpPA07_RS03235	SM00490	helicase superfamily c-terminal domain
CpPA07_RS03245	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CpPA07_RS03245	SM01232	CpPA07_RS03245
CpPA07_RS03265	SM00830	Chorismate mutase type II
CpPA07_RS03290	SM00798	AICARFT/IMPCHase bienzyme
CpPA07_RS03290	SM00851	MGS-like domain
CpPA07_RS03295	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS03300	SM00062	Bacterial periplasmic substrate-binding proteins
CpPA07_RS03360	SM00448	cheY-homologous receiver domain
CpPA07_RS03360	SM00862	Transcriptional regulatory protein, C terminal
CpPA07_RS03365	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CpPA07_RS03365	SM00387	Histidine kinase-like ATPases
CpPA07_RS03365	SM00388	His Kinase A (phosphoacceptor) domain
CpPA07_RS03370	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CpPA07_RS03375	SM00852	Probable molybdopterin binding domain
CpPA07_RS03405	SM00852	Probable molybdopterin binding domain
CpPA07_RS03465	SM01208	CpPA07_RS03465
CpPA07_RS03470	SM00650	Ribosomal RNA adenine dimethylases
CpPA07_RS03480	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS03525	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CpPA07_RS03545	SM00822	CpPA07_RS03545
CpPA07_RS03575	SM00642	Alpha-amylase domain
CpPA07_RS03610	SM00487	DEAD-like helicases superfamily
CpPA07_RS03610	SM00490	helicase superfamily c-terminal domain
CpPA07_RS03610	SM00982	CpPA07_RS03610
CpPA07_RS03610	SM01058	CarD-like/TRCF domain
CpPA07_RS03630	SM01192	CpPA07_RS03630
CpPA07_RS03630	SM01193	CpPA07_RS03630
CpPA07_RS03660	SM00342	helix_turn_helix, arabinose operon control protein
CpPA07_RS03815	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS03820	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS03825	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS03845	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS03880	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS03885	SM00020	Trypsin-like serine protease
CpPA07_RS04000	SM00640	Glycosyl hydrolases family 32
CpPA07_RS04050	SM00924	MgtE intracellular N domain
CpPA07_RS04060	SM00861	Transketolase, pyrimidine binding domain
CpPA07_RS04065	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS04125	SM00487	DEAD-like helicases superfamily
CpPA07_RS04125	SM00490	helicase superfamily c-terminal domain
CpPA07_RS04155	SM00487	DEAD-like helicases superfamily
CpPA07_RS04155	SM00490	helicase superfamily c-terminal domain
CpPA07_RS04175	SM00867	YceI-like domain 
CpPA07_RS04180	SM00347	helix_turn_helix multiple antibiotic resistance protein
CpPA07_RS04230	SM00836	DALR anticodon binding domain
CpPA07_RS04230	SM01016	Arginyl tRNA synthetase N terminal dom
CpPA07_RS04260	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS04260	SM00959	Rho termination factor, N-terminal domain
CpPA07_RS04265	SM00937	CpPA07_RS04265
CpPA07_RS04320	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS04360	SM00642	Alpha-amylase domain
CpPA07_RS04365	SM00642	Alpha-amylase domain
CpPA07_RS04370	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS04385	SM00893	Electron transfer flavoprotein domain
CpPA07_RS04390	SM00893	Electron transfer flavoprotein domain
CpPA07_RS04415	SM00479	CpPA07_RS04415
CpPA07_RS04420	SM00292	breast cancer carboxy-terminal domain
CpPA07_RS04420	SM00532	Ligase N family
CpPA07_RS04460	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS04475	SM00845	GatB domain
CpPA07_RS04555	SM01329	CpPA07_RS04555
CpPA07_RS04560	SM00100	Cyclic nucleotide-monophosphate binding domain
CpPA07_RS04560	SM00116	Domain in cystathionine beta-synthase and other proteins.
CpPA07_RS04565	SM00479	CpPA07_RS04565
CpPA07_RS04605	SM01110	CpPA07_RS04605
CpPA07_RS04615	SM00729	Elongator protein 3, MiaB family, Radical SAM
CpPA07_RS04615	SM00876	Biotin and Thiamin Synthesis associated domain
CpPA07_RS04620	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CpPA07_RS04625	SM00346	helix_turn_helix isocitrate lyase regulation
CpPA07_RS04665	SM00986	Uracil DNA glycosylase superfamily
CpPA07_RS04665	SM00987	UreE urease accessory protein, C-terminal domain 
CpPA07_RS04670	SM01120	CpPA07_RS04670
CpPA07_RS04670	SM01121	CpPA07_RS04670
CpPA07_RS04675	SM00487	DEAD-like helicases superfamily
CpPA07_RS04675	SM00490	helicase superfamily c-terminal domain
CpPA07_RS04705	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS04715	SM00062	Bacterial periplasmic substrate-binding proteins
CpPA07_RS04730	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CpPA07_RS04730	SM00474	3'-5' exonuclease
CpPA07_RS04730	SM00475	5'-3' exonuclease
CpPA07_RS04730	SM00482	DNA polymerase A domain
CpPA07_RS04740	SM00316	Ribosomal protein S1-like RNA-binding domain
CpPA07_RS04760	SM00487	DEAD-like helicases superfamily
CpPA07_RS04760	SM00490	helicase superfamily c-terminal domain
CpPA07_RS04770	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS04780	SM00849	Metallo-beta-lactamase superfamily
CpPA07_RS04810	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CpPA07_RS04820	SM00873	B3/4 domain
CpPA07_RS04820	SM00874	tRNA synthetase B5 domain
CpPA07_RS04820	SM00896	Ferredoxin-fold anticodon binding domain
CpPA07_RS04825	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CpPA07_RS04870	SM00363	S4 RNA-binding domain
CpPA07_RS04905	SM00363	S4 RNA-binding domain
CpPA07_RS04975	SM00363	S4 RNA-binding domain
CpPA07_RS05025	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS05075	SM00957	SecA DEAD-like domain
CpPA07_RS05075	SM00958	SecA preprotein cross-linking domain
CpPA07_RS05080	SM00240	Forkhead associated domain
CpPA07_RS05085	SM00422	helix_turn_helix, mercury resistance
CpPA07_RS05095	SM00422	helix_turn_helix, mercury resistance
CpPA07_RS05100	SM00327	von Willebrand factor (vWF) type A domain
CpPA07_RS05115	SM01091	Transporter associated domain
CpPA07_RS05120	SM00487	DEAD-like helicases superfamily
CpPA07_RS05120	SM00490	helicase superfamily c-terminal domain
CpPA07_RS05125	SM01350	CpPA07_RS05125
CpPA07_RS05170	SM00867	YceI-like domain 
CpPA07_RS05245	SM00487	DEAD-like helicases superfamily
CpPA07_RS05245	SM00490	helicase superfamily c-terminal domain
CpPA07_RS05245	SM01142	CpPA07_RS05245
CpPA07_RS05285	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS05340	SM01018	B12 binding domain
CpPA07_RS05395	SM01120	CpPA07_RS05395
CpPA07_RS05455	SM00244	prohibitin homologues
CpPA07_RS05530	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS05575	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS05595	SM00861	Transketolase, pyrimidine binding domain
CpPA07_RS05640	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CpPA07_RS05660	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CpPA07_RS05660	SM00465	GIY-YIG type nucleases (URI domain)
CpPA07_RS05725	SM01409	CpPA07_RS05725
CpPA07_RS05730	SM00072	Guanylate kinase homologues.
CpPA07_RS05740	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CpPA07_RS05745	SM00851	MGS-like domain
CpPA07_RS05745	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CpPA07_RS05750	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CpPA07_RS05790	SM00841	Elongation factor P, C-terminal
CpPA07_RS05790	SM01185	CpPA07_RS05790
CpPA07_RS05835	SM00732	Likely ribonuclease with RNase H fold.
CpPA07_RS05840	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CpPA07_RS05845	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS05865	SM00487	DEAD-like helicases superfamily
CpPA07_RS05865	SM00490	helicase superfamily c-terminal domain
CpPA07_RS05915	SM00849	Metallo-beta-lactamase superfamily
CpPA07_RS05935	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CpPA07_RS05935	SM00954	Region found in RelA / SpoT proteins
CpPA07_RS05960	SM01323	CpPA07_RS05960
CpPA07_RS05965	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS06030	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CpPA07_RS06050	SM00894	Excalibur calcium-binding domain
CpPA07_RS06105	SM00474	3'-5' exonuclease
CpPA07_RS06110	SM00861	Transketolase, pyrimidine binding domain
CpPA07_RS06165	SM00487	DEAD-like helicases superfamily
CpPA07_RS06195	SM00529	Helix-turn-helix diphteria tox regulatory element
CpPA07_RS06215	SM00487	DEAD-like helicases superfamily
CpPA07_RS06215	SM00490	helicase superfamily c-terminal domain
CpPA07_RS06240	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS06240	SM00487	DEAD-like helicases superfamily
CpPA07_RS06240	SM00490	helicase superfamily c-terminal domain
CpPA07_RS06240	SM00847	Helicase associated domain (HA2)  Add an annotation
CpPA07_RS06260	SM00420	helix_turn_helix, Deoxyribose operon repressor
CpPA07_RS06260	SM01134	CpPA07_RS06260
CpPA07_RS06270	SM00420	helix_turn_helix, Deoxyribose operon repressor
CpPA07_RS06270	SM01134	CpPA07_RS06270
CpPA07_RS06355	SM00729	Elongator protein 3, MiaB family, Radical SAM
CpPA07_RS06365	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS06380	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS06395	SM00530	Helix-turn-helix XRE-family like proteins 
CpPA07_RS06420	SM00843	CpPA07_RS06420
CpPA07_RS06430	SM00849	Metallo-beta-lactamase superfamily
CpPA07_RS06435	SM01130	CpPA07_RS06435
CpPA07_RS06450	SM00316	Ribosomal protein S1-like RNA-binding domain
CpPA07_RS06450	SM00322	K homology RNA-binding domain
CpPA07_RS06455	SM01387	CpPA07_RS06455
CpPA07_RS06465	SM00904	Riboflavin kinase
CpPA07_RS06500	SM00173	Ras subfamily of RAS small GTPases
CpPA07_RS06510	SM00322	K homology RNA-binding domain
CpPA07_RS06545	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CpPA07_RS06565	SM00327	von Willebrand factor (vWF) type A domain
CpPA07_RS06570	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS06615	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CpPA07_RS06685	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS06710	SM00316	Ribosomal protein S1-like RNA-binding domain
CpPA07_RS06710	SM00732	Likely ribonuclease with RNase H fold.
CpPA07_RS06745	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS06745	SM00962	SRP54-type protein, GTPase domain
CpPA07_RS06745	SM00963	SRP54-type protein, helical bundle domain
CpPA07_RS06750	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CpPA07_RS06755	SM00938	Nitrogen regulatory protein P-II
CpPA07_RS06760	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS06760	SM00962	SRP54-type protein, GTPase domain
CpPA07_RS06760	SM00963	SRP54-type protein, helical bundle domain
CpPA07_RS06785	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CpPA07_RS06785	SM01232	CpPA07_RS06785
CpPA07_RS06790	SM00358	Double-stranded RNA binding motif
CpPA07_RS06790	SM00535	Ribonuclease III family
CpPA07_RS06810	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CpPA07_RS06810	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CpPA07_RS06815	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CpPA07_RS06945	SM00642	Alpha-amylase domain
CpPA07_RS06950	SM00479	CpPA07_RS06950
CpPA07_RS06960	SM00954	Region found in RelA / SpoT proteins
CpPA07_RS06965	SM00363	S4 RNA-binding domain
CpPA07_RS06985	SM00481	DNA polymerase alpha chain like domain
CpPA07_RS07020	SM00870	CpPA07_RS07020
CpPA07_RS07065	SM00864	Tubulin/FtsZ family, GTPase domain
CpPA07_RS07065	SM00865	Tubulin/FtsZ family, C-terminal domain
CpPA07_RS07170	SM00220	Serine/Threonine protein kinases, catalytic domain
CpPA07_RS07170	SM00740	CpPA07_RS07170
CpPA07_RS07190	SM00563	Phosphate acyltransferases
CpPA07_RS07320	SM00729	Elongator protein 3, MiaB family, Radical SAM
CpPA07_RS07335	SM01230	CpPA07_RS07335
CpPA07_RS07445	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS07470	SM00116	Domain in cystathionine beta-synthase and other proteins.
CpPA07_RS07470	SM01240	CpPA07_RS07470
CpPA07_RS07515	SM01230	CpPA07_RS07515
CpPA07_RS07525	SM00880	CpPA07_RS07525
CpPA07_RS07525	SM01118	CpPA07_RS07525
CpPA07_RS07540	SM00955	CpPA07_RS07540
CpPA07_RS07550	SM00855	Phosphoglycerate mutase family
CpPA07_RS07575	SM00226	Low molecular weight phosphatase family
CpPA07_RS07655	SM00400	zinc finger
CpPA07_RS07655	SM00493	CpPA07_RS07655
CpPA07_RS07655	SM00766	DNA primase DnaG DnaB-binding
CpPA07_RS07675	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CpPA07_RS07710	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CpPA07_RS07745	SM01091	Transporter associated domain
CpPA07_RS07755	SM00322	K homology RNA-binding domain
CpPA07_RS07765	SM00271	DnaJ molecular chaperone homology domain
CpPA07_RS07775	SM00729	Elongator protein 3, MiaB family, Radical SAM
CpPA07_RS07835	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS07850	SM00507	HNH nucleases
CpPA07_RS07885	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS07925	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS07930	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS07940	SM00838	Elongation factor G C-terminus
CpPA07_RS07960	SM00248	ankyrin repeats
CpPA07_RS07985	SM00855	Phosphoglycerate mutase family
CpPA07_RS08020	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CpPA07_RS08040	SM00316	Ribosomal protein S1-like RNA-binding domain
CpPA07_RS08050	SM00562	CpPA07_RS08050
CpPA07_RS08085	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS08085	SM00994	ClpX C4-type zinc finger
CpPA07_RS08085	SM01086	C-terminal, D2-small domain, of ClpB protein
CpPA07_RS08175	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS08230	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS08260	SM00829	Enoylreductase
CpPA07_RS08265	SM00822	CpPA07_RS08265
CpPA07_RS08270	SM00479	CpPA07_RS08270
CpPA07_RS08280	SM01130	CpPA07_RS08280
CpPA07_RS08295	SM00829	Enoylreductase
CpPA07_RS08330	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CpPA07_RS08345	SM00421	helix_turn_helix, Lux Regulon
CpPA07_RS08345	SM00448	cheY-homologous receiver domain
CpPA07_RS08425	SM00487	DEAD-like helicases superfamily
CpPA07_RS08425	SM00491	CpPA07_RS08425
CpPA07_RS08510	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CpPA07_RS08585	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS08620	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CpPA07_RS08620	SM00421	helix_turn_helix, Lux Regulon
CpPA07_RS08685	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS08690	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS08715	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS08745	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CpPA07_RS08805	SM01211	CpPA07_RS08805
CpPA07_RS08835	SM00998	Adenylosuccinate lyase C-terminus
CpPA07_RS08850	SM01209	CpPA07_RS08850
CpPA07_RS08850	SM01210	CpPA07_RS08850
CpPA07_RS08865	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CpPA07_RS08865	SM00387	Histidine kinase-like ATPases
CpPA07_RS08865	SM00388	His Kinase A (phosphoacceptor) domain
CpPA07_RS08870	SM00448	cheY-homologous receiver domain
CpPA07_RS08870	SM00862	Transcriptional regulatory protein, C terminal
CpPA07_RS08950	SM00354	helix_turn _helix lactose operon repressor
CpPA07_RS08960	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CpPA07_RS08965	SM00840	CpPA07_RS08965
CpPA07_RS08980	SM01058	CarD-like/TRCF domain
CpPA07_RS09000	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS09010	SM00947	Carbonic anhydrase
CpPA07_RS09015	SM00478	endonuclease III
CpPA07_RS09015	SM00525	CpPA07_RS09015
CpPA07_RS09030	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS09030	SM01086	C-terminal, D2-small domain, of ClpB protein
CpPA07_RS09065	SM00244	prohibitin homologues
CpPA07_RS09120	SM00905	Dihydroneopterin aldolase
CpPA07_RS09135	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS09160	SM00450	Rhodanese Homology Domain
CpPA07_RS09180	SM00347	helix_turn_helix multiple antibiotic resistance protein
CpPA07_RS09185	SM00823	Phosphopantetheine attachment site
CpPA07_RS09300	SM00155	Phospholipase D. Active site motifs.
CpPA07_RS09310	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS09325	SM00062	Bacterial periplasmic substrate-binding proteins
CpPA07_RS09330	SM00220	Serine/Threonine protein kinases, catalytic domain
CpPA07_RS09405	SM00028	Tetratricopeptide repeats
CpPA07_RS09420	SM00788	Adenylosuccinate synthetase
CpPA07_RS09450	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS09500	SM00450	Rhodanese Homology Domain
CpPA07_RS09540	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS09540	SM01086	C-terminal, D2-small domain, of ClpB protein
CpPA07_RS09545	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS09600	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS09625	SM00829	Enoylreductase
CpPA07_RS09645	SM00422	helix_turn_helix, mercury resistance
CpPA07_RS09650	SM00271	DnaJ molecular chaperone homology domain
CpPA07_RS09685	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS09725	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CpPA07_RS09730	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS09760	SM00988	UreE urease accessory protein, N-terminal domain
CpPA07_RS09815	SM00984	UDP binding domain
CpPA07_RS09925	SM00823	Phosphopantetheine attachment site
CpPA07_RS09925	SM00824	Thioesterase
CpPA07_RS09925	SM00825	Beta-ketoacyl synthase
CpPA07_RS09925	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CpPA07_RS09935	SM01110	CpPA07_RS09935
CpPA07_RS09970	SM00014	Acid phosphatase homologues
CpPA07_RS09985	SM00014	Acid phosphatase homologues
CpPA07_RS10010	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS10025	SM00644	CpPA07_RS10025
CpPA07_RS10025	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
CpPA07_RS10035	SM00563	Phosphate acyltransferases
CpPA07_RS10045	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CpPA07_RS10045	SM00866	CpPA07_RS10045
CpPA07_RS10060	SM00855	Phosphoglycerate mutase family
CpPA07_RS10120	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CpPA07_RS10200	SM00421	helix_turn_helix, Lux Regulon
CpPA07_RS10200	SM00448	cheY-homologous receiver domain
CpPA07_RS10205	SM00387	Histidine kinase-like ATPases
CpPA07_RS10285	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CpPA07_RS10320	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS10375	SM00347	helix_turn_helix multiple antibiotic resistance protein
CpPA07_RS10395	SM00450	Rhodanese Homology Domain
CpPA07_RS10410	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CpPA07_RS10410	SM01232	CpPA07_RS10410
CpPA07_RS10435	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS10460	SM00421	helix_turn_helix, Lux Regulon
CpPA07_RS10460	SM00448	cheY-homologous receiver domain
CpPA07_RS10490	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CpPA07_RS10490	SM00895	CpPA07_RS10490
CpPA07_RS10505	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS10510	SM00382	ATPases associated with a variety of cellular activities
CpPA07_RS10515	SM01130	CpPA07_RS10515
CpPA07_RS10690	SM00646	CpPA07_RS10690
CpPA07_RS10700	SM00470	ParB-like nuclease domain
CpPA07_RS10720	SM01234	CpPA07_RS10720
