ccrud_RS00005 SM00382 ATPases associated with a variety of cellular activities ccrud_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain ccrud_RS00015 SM00480 DNA polymerase III beta subunit ccrud_RS00030 SM00387 Histidine kinase-like ATPases ccrud_RS00030 SM00433 TopoisomeraseII ccrud_RS00065 SM00434 DNA Topoisomerase IV ccrud_RS00125 SM00382 ATPases associated with a variety of cellular activities ccrud_RS00150 SM00220 Serine/Threonine protein kinases, catalytic domain ccrud_RS00150 SM00740 ccrud_RS00150 ccrud_RS00155 SM00220 Serine/Threonine protein kinases, catalytic domain ccrud_RS00170 SM00331 Sigma factor PP2C-like phosphatases ccrud_RS00170 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ccrud_RS00175 SM00240 Forkhead associated domain ccrud_RS00180 SM00240 Forkhead associated domain ccrud_RS00205 SM00886 Stress responsive A/B Barrel Domain ccrud_RS00220 SM00346 helix_turn_helix isocitrate lyase regulation ccrud_RS00265 SM00450 Rhodanese Homology Domain ccrud_RS00265 SM00849 Metallo-beta-lactamase superfamily ccrud_RS00275 SM00450 Rhodanese Homology Domain ccrud_RS00280 SM00450 Rhodanese Homology Domain ccrud_RS00330 SM00670 Large family of predicted nucleotide-binding domains ccrud_RS00345 SM00387 Histidine kinase-like ATPases ccrud_RS00350 SM00448 cheY-homologous receiver domain ccrud_RS00365 SM00729 Elongator protein 3, MiaB family, Radical SAM ccrud_RS00365 SM00876 Biotin and Thiamin Synthesis associated domain ccrud_RS00440 SM00346 helix_turn_helix isocitrate lyase regulation ccrud_RS00465 SM00347 helix_turn_helix multiple antibiotic resistance protein ccrud_RS00485 SM00347 helix_turn_helix multiple antibiotic resistance protein ccrud_RS00505 SM00988 UreE urease accessory protein, N-terminal domain ccrud_RS00590 SM00342 helix_turn_helix, arabinose operon control protein ccrud_RS00620 SM00420 helix_turn_helix, Deoxyribose operon repressor ccrud_RS00620 SM01134 ccrud_RS00620 ccrud_RS00650 SM00530 Helix-turn-helix XRE-family like proteins ccrud_RS00740 SM00487 DEAD-like helicases superfamily ccrud_RS00740 SM00490 helicase superfamily c-terminal domain ccrud_RS00740 SM00847 Helicase associated domain (HA2) Add an annotation ccrud_RS00750 SM01266 ccrud_RS00750 ccrud_RS00820 SM00345 helix_turn_helix gluconate operon transcriptional repressor ccrud_RS00820 SM00866 ccrud_RS00820 ccrud_RS00885 SM00354 helix_turn _helix lactose operon repressor ccrud_RS00910 SM00382 ATPases associated with a variety of cellular activities ccrud_RS00920 SM00354 helix_turn _helix lactose operon repressor ccrud_RS00955 SM00354 helix_turn _helix lactose operon repressor ccrud_RS00965 SM00998 Adenylosuccinate lyase C-terminus ccrud_RS00970 SM00091 PAS domain ccrud_RS00990 SM00421 helix_turn_helix, Lux Regulon ccrud_RS00990 SM00448 cheY-homologous receiver domain ccrud_RS01065 SM00382 ATPases associated with a variety of cellular activities ccrud_RS01080 SM00829 Enoylreductase ccrud_RS01110 SM00450 Rhodanese Homology Domain ccrud_RS01120 SM00852 Probable molybdopterin binding domain ccrud_RS01130 SM00852 Probable molybdopterin binding domain ccrud_RS01150 SM00382 ATPases associated with a variety of cellular activities ccrud_RS01175 SM00116 Domain in cystathionine beta-synthase and other proteins. ccrud_RS01175 SM00924 MgtE intracellular N domain ccrud_RS01275 SM00382 ATPases associated with a variety of cellular activities ccrud_RS01285 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ccrud_RS01285 SM00493 ccrud_RS01285 ccrud_RS01325 SM00917 LeuA allosteric (dimerisation) domain ccrud_RS01350 SM00859 Semialdehyde dehydrogenase, NAD binding domain ccrud_RS01360 SM01060 ccrud_RS01360 ccrud_RS01410 SM00448 cheY-homologous receiver domain ccrud_RS01410 SM00862 Transcriptional regulatory protein, C terminal ccrud_RS01415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ccrud_RS01415 SM00387 Histidine kinase-like ATPases ccrud_RS01415 SM00388 His Kinase A (phosphoacceptor) domain ccrud_RS01470 SM00347 helix_turn_helix multiple antibiotic resistance protein ccrud_RS01475 SM00822 ccrud_RS01475 ccrud_RS01495 SM00849 Metallo-beta-lactamase superfamily ccrud_RS01500 SM00100 Cyclic nucleotide-monophosphate binding domain ccrud_RS01500 SM00419 helix_turn_helix, cAMP Regulatory protein ccrud_RS01510 SM00478 endonuclease III ccrud_RS01510 SM00525 ccrud_RS01510 ccrud_RS01580 SM00487 DEAD-like helicases superfamily ccrud_RS01580 SM00490 helicase superfamily c-terminal domain ccrud_RS01585 SM00357 Cold shock protein domain ccrud_RS01595 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ccrud_RS01595 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ccrud_RS01595 SM00493 ccrud_RS01595 ccrud_RS01605 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain ccrud_RS01605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ccrud_RS01610 SM00382 ATPases associated with a variety of cellular activities ccrud_RS01645 SM00363 S4 RNA-binding domain ccrud_RS01655 SM00829 Enoylreductase ccrud_RS01660 SM00849 Metallo-beta-lactamase superfamily ccrud_RS01705 SM00829 Enoylreductase ccrud_RS01710 SM00342 helix_turn_helix, arabinose operon control protein ccrud_RS01710 SM00871 Bacterial transcription activator, effector binding domain ccrud_RS01800 SM00894 Excalibur calcium-binding domain ccrud_RS01830 SM00226 Low molecular weight phosphatase family ccrud_RS01970 SM00530 Helix-turn-helix XRE-family like proteins ccrud_RS02060 SM01133 ccrud_RS02060 ccrud_RS02115 SM00855 Phosphoglycerate mutase family ccrud_RS02120 SM00387 Histidine kinase-like ATPases ccrud_RS02120 SM00388 His Kinase A (phosphoacceptor) domain ccrud_RS02125 SM00448 cheY-homologous receiver domain ccrud_RS02125 SM00862 Transcriptional regulatory protein, C terminal ccrud_RS02220 SM00382 ATPases associated with a variety of cellular activities ccrud_RS02245 SM01004 Delta-aminolevulinic acid dehydratase ccrud_RS02280 SM00855 Phosphoglycerate mutase family ccrud_RS02315 SM00382 ATPases associated with a variety of cellular activities ccrud_RS02330 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ccrud_RS02375 SM01130 ccrud_RS02375 ccrud_RS02425 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ccrud_RS02495 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. ccrud_RS02495 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ccrud_RS02500 SM00649 Ribosomal protein L11/L12 ccrud_RS02555 SM00663 RNA polymerase I subunit A N-terminus ccrud_RS02565 SM00530 Helix-turn-helix XRE-family like proteins ccrud_RS02585 SM00838 Elongation factor G C-terminus ccrud_RS02585 SM00889 Elongation factor G, domain IV ccrud_RS02600 SM01403 ccrud_RS02600 ccrud_RS02620 SM01382 ccrud_RS02620 ccrud_RS02620 SM01383 ccrud_RS02620 ccrud_RS02635 SM00322 K homology RNA-binding domain ccrud_RS02660 SM01374 ccrud_RS02660 ccrud_RS02665 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ccrud_RS02680 SM00342 helix_turn_helix, arabinose operon control protein ccrud_RS02730 SM00382 ATPases associated with a variety of cellular activities ccrud_RS02805 SM00822 ccrud_RS02805 ccrud_RS02825 SM00346 helix_turn_helix isocitrate lyase regulation ccrud_RS02850 SM00984 UDP binding domain ccrud_RS02855 SM00710 Parallel beta-helix repeats ccrud_RS02860 SM00710 Parallel beta-helix repeats ccrud_RS02880 SM00316 Ribosomal protein S1-like RNA-binding domain ccrud_RS02895 SM00363 S4 RNA-binding domain ccrud_RS02895 SM01390 ccrud_RS02895 ccrud_RS02900 SM00662 RNA polymerases D ccrud_RS02940 SM00382 ATPases associated with a variety of cellular activities ccrud_RS03000 SM01005 Alanine racemase, C-terminal domain ccrud_RS03045 SM00883 Chaperonin 10 Kd subunit ccrud_RS03075 SM00116 Domain in cystathionine beta-synthase and other proteins. ccrud_RS03075 SM01240 ccrud_RS03075 ccrud_RS03080 SM01240 ccrud_RS03080 ccrud_RS03105 SM00421 helix_turn_helix, Lux Regulon ccrud_RS03105 SM00448 cheY-homologous receiver domain ccrud_RS03175 SM00347 helix_turn_helix multiple antibiotic resistance protein ccrud_RS03205 SM00382 ATPases associated with a variety of cellular activities ccrud_RS03215 SM00382 ATPases associated with a variety of cellular activities ccrud_RS03215 SM00930 ccrud_RS03215 ccrud_RS03235 SM00529 Helix-turn-helix diphteria tox regulatory element ccrud_RS03235 SM00899 ccrud_RS03235 ccrud_RS03270 SM00244 prohibitin homologues ccrud_RS03310 SM00382 ATPases associated with a variety of cellular activities ccrud_RS03355 SM00382 ATPases associated with a variety of cellular activities ccrud_RS03405 SM00530 Helix-turn-helix XRE-family like proteins ccrud_RS03425 SM00878 Biotin carboxylase C-terminal domain ccrud_RS03450 SM00878 Biotin carboxylase C-terminal domain ccrud_RS03455 SM00450 Rhodanese Homology Domain ccrud_RS03520 SM01001 AIR carboxylase ccrud_RS03585 SM00382 ATPases associated with a variety of cellular activities ccrud_RS03595 SM00860 SMI1 / KNR4 family ccrud_RS03660 SM00996 S-adenosyl-L-homocysteine hydrolase ccrud_RS03660 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ccrud_RS03670 SM00448 cheY-homologous receiver domain ccrud_RS03670 SM00862 Transcriptional regulatory protein, C terminal ccrud_RS03675 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ccrud_RS03675 SM00387 Histidine kinase-like ATPases ccrud_RS03675 SM00388 His Kinase A (phosphoacceptor) domain ccrud_RS03680 SM00909 Sporulation and spore germination ccrud_RS03695 SM00957 SecA DEAD-like domain ccrud_RS03695 SM00958 SecA preprotein cross-linking domain ccrud_RS03730 SM00507 HNH nucleases ccrud_RS03755 SM00487 DEAD-like helicases superfamily ccrud_RS03755 SM00490 helicase superfamily c-terminal domain ccrud_RS03795 SM00341 Helicase and RNase D C-terminal ccrud_RS03840 SM00345 helix_turn_helix gluconate operon transcriptional repressor ccrud_RS03885 SM00937 ccrud_RS03885 ccrud_RS03890 SM00382 ATPases associated with a variety of cellular activities ccrud_RS03940 SM00942 Primase C terminal 1 (PriCT-1) ccrud_RS03940 SM00943 Bifunctional DNA primase/polymerase, N-terminal ccrud_RS03970 SM00756 ccrud_RS03970 ccrud_RS03990 SM00382 ATPases associated with a variety of cellular activities ccrud_RS04020 SM00487 DEAD-like helicases superfamily ccrud_RS04020 SM00490 helicase superfamily c-terminal domain ccrud_RS04040 SM00357 Cold shock protein domain ccrud_RS04120 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ccrud_RS04170 SM00487 DEAD-like helicases superfamily ccrud_RS04170 SM00490 helicase superfamily c-terminal domain ccrud_RS04175 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain ccrud_RS04175 SM01232 ccrud_RS04175 ccrud_RS04210 SM00507 HNH nucleases ccrud_RS04215 SM00830 Chorismate mutase type II ccrud_RS04230 SM00382 ATPases associated with a variety of cellular activities ccrud_RS04255 SM00798 AICARFT/IMPCHase bienzyme ccrud_RS04255 SM00851 MGS-like domain ccrud_RS04300 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ccrud_RS04320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ccrud_RS04320 SM00387 Histidine kinase-like ATPases ccrud_RS04320 SM00388 His Kinase A (phosphoacceptor) domain ccrud_RS04325 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ccrud_RS04330 SM00852 Probable molybdopterin binding domain ccrud_RS04345 SM00858 ccrud_RS04345 ccrud_RS04360 SM00852 Probable molybdopterin binding domain ccrud_RS04390 SM00642 Alpha-amylase domain ccrud_RS04415 SM00487 DEAD-like helicases superfamily ccrud_RS04415 SM00490 helicase superfamily c-terminal domain ccrud_RS04440 SM00858 ccrud_RS04440 ccrud_RS04445 SM00858 ccrud_RS04445 ccrud_RS04465 SM00345 helix_turn_helix gluconate operon transcriptional repressor ccrud_RS04465 SM00895 ccrud_RS04465 ccrud_RS04495 SM01208 ccrud_RS04495 ccrud_RS04500 SM00650 Ribosomal RNA adenine dimethylases ccrud_RS04510 SM00382 ATPases associated with a variety of cellular activities ccrud_RS04615 SM00382 ATPases associated with a variety of cellular activities ccrud_RS04620 SM00382 ATPases associated with a variety of cellular activities ccrud_RS04635 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ccrud_RS04665 SM01400 ccrud_RS04665 ccrud_RS04685 SM00382 ATPases associated with a variety of cellular activities ccrud_RS04700 SM00421 helix_turn_helix, Lux Regulon ccrud_RS04700 SM00448 cheY-homologous receiver domain ccrud_RS04715 SM00346 helix_turn_helix isocitrate lyase regulation ccrud_RS04745 SM00894 Excalibur calcium-binding domain ccrud_RS04755 SM00487 DEAD-like helicases superfamily ccrud_RS04755 SM00490 helicase superfamily c-terminal domain ccrud_RS04755 SM00982 ccrud_RS04755 ccrud_RS04755 SM01058 CarD-like/TRCF domain ccrud_RS04760 SM00382 ATPases associated with a variety of cellular activities ccrud_RS04765 SM00382 ATPases associated with a variety of cellular activities ccrud_RS04810 SM01192 ccrud_RS04810 ccrud_RS04810 SM01193 ccrud_RS04810 ccrud_RS04835 SM00342 helix_turn_helix, arabinose operon control protein ccrud_RS04925 SM00797 Allophanate hydrolase subunit 2 ccrud_RS04930 SM00796 Allophanate hydrolase subunit 1 ccrud_RS04945 SM00345 helix_turn_helix gluconate operon transcriptional repressor ccrud_RS04945 SM00895 ccrud_RS04945 ccrud_RS04960 SM00345 helix_turn_helix gluconate operon transcriptional repressor ccrud_RS04960 SM00895 ccrud_RS04960 ccrud_RS05000 SM00347 helix_turn_helix multiple antibiotic resistance protein ccrud_RS05045 SM00357 Cold shock protein domain ccrud_RS05090 SM00327 von Willebrand factor (vWF) type A domain ccrud_RS05100 SM00855 Phosphoglycerate mutase family ccrud_RS05115 SM00382 ATPases associated with a variety of cellular activities ccrud_RS05130 SM00347 helix_turn_helix multiple antibiotic resistance protein ccrud_RS05175 SM00849 Metallo-beta-lactamase superfamily ccrud_RS05205 SM00382 ATPases associated with a variety of cellular activities ccrud_RS05235 SM00382 ATPases associated with a variety of cellular activities ccrud_RS05275 SM00020 Trypsin-like serine protease ccrud_RS05335 SM00507 HNH nucleases ccrud_RS05390 SM00640 Glycosyl hydrolases family 32 ccrud_RS05435 SM00924 MgtE intracellular N domain ccrud_RS05455 SM00861 Transketolase, pyrimidine binding domain ccrud_RS05460 SM00382 ATPases associated with a variety of cellular activities ccrud_RS05530 SM00382 ATPases associated with a variety of cellular activities ccrud_RS05535 SM00382 ATPases associated with a variety of cellular activities ccrud_RS05550 SM00487 DEAD-like helicases superfamily ccrud_RS05550 SM00490 helicase superfamily c-terminal domain ccrud_RS05570 SM00487 DEAD-like helicases superfamily ccrud_RS05570 SM00490 helicase superfamily c-terminal domain ccrud_RS05600 SM00487 DEAD-like helicases superfamily ccrud_RS05600 SM00490 helicase superfamily c-terminal domain ccrud_RS05625 SM00882 Coenzyme A transferase ccrud_RS05630 SM00882 Coenzyme A transferase ccrud_RS05650 SM00867 YceI-like domain ccrud_RS05655 SM00347 helix_turn_helix multiple antibiotic resistance protein ccrud_RS05670 SM00100 Cyclic nucleotide-monophosphate binding domain ccrud_RS05670 SM00419 helix_turn_helix, cAMP Regulatory protein ccrud_RS05700 SM00836 DALR anticodon binding domain ccrud_RS05700 SM01016 Arginyl tRNA synthetase N terminal dom ccrud_RS05740 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ccrud_RS05750 SM00852 Probable molybdopterin binding domain ccrud_RS05755 SM00014 Acid phosphatase homologues ccrud_RS05765 SM01091 Transporter associated domain ccrud_RS05775 SM00852 Probable molybdopterin binding domain ccrud_RS05780 SM00729 Elongator protein 3, MiaB family, Radical SAM ccrud_RS05790 SM00382 ATPases associated with a variety of cellular activities ccrud_RS05790 SM00959 Rho termination factor, N-terminal domain ccrud_RS05795 SM00937 ccrud_RS05795 ccrud_RS05850 SM00382 ATPases associated with a variety of cellular activities ccrud_RS05885 SM00642 Alpha-amylase domain ccrud_RS05890 SM00642 Alpha-amylase domain ccrud_RS05895 SM00382 ATPases associated with a variety of cellular activities ccrud_RS05910 SM00893 Electron transfer flavoprotein domain ccrud_RS05915 SM00893 Electron transfer flavoprotein domain ccrud_RS05935 SM00530 Helix-turn-helix XRE-family like proteins ccrud_RS05975 SM00479 ccrud_RS05975 ccrud_RS05980 SM00292 breast cancer carboxy-terminal domain ccrud_RS05980 SM00532 Ligase N family ccrud_RS06020 SM00354 helix_turn _helix lactose operon repressor ccrud_RS06025 SM00382 ATPases associated with a variety of cellular activities ccrud_RS06055 SM00845 GatB domain ccrud_RS06150 SM01329 ccrud_RS06150 ccrud_RS06160 SM00100 Cyclic nucleotide-monophosphate binding domain ccrud_RS06160 SM00116 Domain in cystathionine beta-synthase and other proteins. ccrud_RS06165 SM00479 ccrud_RS06165 ccrud_RS06190 SM00530 Helix-turn-helix XRE-family like proteins ccrud_RS06315 SM00487 DEAD-like helicases superfamily ccrud_RS06335 SM00382 ATPases associated with a variety of cellular activities ccrud_RS06355 SM00382 ATPases associated with a variety of cellular activities ccrud_RS06390 SM00894 Excalibur calcium-binding domain ccrud_RS06400 SM00421 helix_turn_helix, Lux Regulon ccrud_RS06410 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ccrud_RS06415 SM00346 helix_turn_helix isocitrate lyase regulation ccrud_RS06440 SM00855 Phosphoglycerate mutase family ccrud_RS06465 SM00986 Uracil DNA glycosylase superfamily ccrud_RS06465 SM00987 UreE urease accessory protein, C-terminal domain ccrud_RS06470 SM01120 ccrud_RS06470 ccrud_RS06470 SM01121 ccrud_RS06470 ccrud_RS06475 SM00487 DEAD-like helicases superfamily ccrud_RS06475 SM00490 helicase superfamily c-terminal domain ccrud_RS06505 SM00382 ATPases associated with a variety of cellular activities ccrud_RS06515 SM00062 Bacterial periplasmic substrate-binding proteins ccrud_RS06535 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ccrud_RS06535 SM00474 3'-5' exonuclease ccrud_RS06535 SM00475 5'-3' exonuclease ccrud_RS06535 SM00482 DNA polymerase A domain ccrud_RS06545 SM00316 Ribosomal protein S1-like RNA-binding domain ccrud_RS06570 SM00487 DEAD-like helicases superfamily ccrud_RS06570 SM00490 helicase superfamily c-terminal domain ccrud_RS06600 SM00849 Metallo-beta-lactamase superfamily ccrud_RS06605 SM00382 ATPases associated with a variety of cellular activities ccrud_RS06645 SM00382 ATPases associated with a variety of cellular activities ccrud_RS06655 SM00967 RNA 2'-O ribose methyltransferase substrate binding ccrud_RS06665 SM00873 B3/4 domain ccrud_RS06665 SM00874 tRNA synthetase B5 domain ccrud_RS06665 SM00896 Ferredoxin-fold anticodon binding domain ccrud_RS06685 SM00859 Semialdehyde dehydrogenase, NAD binding domain ccrud_RS06730 SM00327 von Willebrand factor (vWF) type A domain ccrud_RS06775 SM00363 S4 RNA-binding domain ccrud_RS06830 SM00450 Rhodanese Homology Domain ccrud_RS06840 SM00363 S4 RNA-binding domain ccrud_RS06860 SM00530 Helix-turn-helix XRE-family like proteins ccrud_RS06895 SM00382 ATPases associated with a variety of cellular activities ccrud_RS06920 SM00871 Bacterial transcription activator, effector binding domain ccrud_RS06935 SM00382 ATPases associated with a variety of cellular activities ccrud_RS06965 SM00957 SecA DEAD-like domain ccrud_RS06965 SM00958 SecA preprotein cross-linking domain ccrud_RS06970 SM00240 Forkhead associated domain ccrud_RS06975 SM00422 helix_turn_helix, mercury resistance ccrud_RS06985 SM00422 helix_turn_helix, mercury resistance ccrud_RS06990 SM00344 helix_turn_helix ASNC type ccrud_RS07015 SM01091 Transporter associated domain ccrud_RS07020 SM00487 DEAD-like helicases superfamily ccrud_RS07020 SM00490 helicase superfamily c-terminal domain ccrud_RS07040 SM01350 ccrud_RS07040 ccrud_RS07055 SM00382 ATPases associated with a variety of cellular activities ccrud_RS07080 SM00382 ATPases associated with a variety of cellular activities ccrud_RS07165 SM00867 YceI-like domain ccrud_RS07230 SM00487 DEAD-like helicases superfamily ccrud_RS07230 SM00490 helicase superfamily c-terminal domain ccrud_RS07230 SM01142 ccrud_RS07230 ccrud_RS07270 SM00382 ATPases associated with a variety of cellular activities ccrud_RS07290 SM00530 Helix-turn-helix XRE-family like proteins ccrud_RS07320 SM01018 B12 binding domain ccrud_RS07330 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ccrud_RS07340 SM00226 Low molecular weight phosphatase family ccrud_RS07410 SM00382 ATPases associated with a variety of cellular activities ccrud_RS07465 SM00244 prohibitin homologues ccrud_RS07545 SM00382 ATPases associated with a variety of cellular activities ccrud_RS07590 SM00382 ATPases associated with a variety of cellular activities ccrud_RS07605 SM00829 Enoylreductase ccrud_RS07615 SM00861 Transketolase, pyrimidine binding domain ccrud_RS07675 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ccrud_RS07695 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ccrud_RS07695 SM00465 GIY-YIG type nucleases (URI domain) ccrud_RS07760 SM01409 ccrud_RS07760 ccrud_RS07765 SM00072 Guanylate kinase homologues. ccrud_RS07775 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family ccrud_RS07780 SM00851 MGS-like domain ccrud_RS07780 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ccrud_RS07785 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain ccrud_RS07825 SM00841 Elongation factor P, C-terminal ccrud_RS07825 SM01185 ccrud_RS07825 ccrud_RS07870 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ccrud_RS07885 SM00382 ATPases associated with a variety of cellular activities ccrud_RS07900 SM00732 Likely ribonuclease with RNase H fold. ccrud_RS07905 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ccrud_RS07910 SM00382 ATPases associated with a variety of cellular activities ccrud_RS07930 SM00487 DEAD-like helicases superfamily ccrud_RS07930 SM00490 helicase superfamily c-terminal domain ccrud_RS07975 SM00849 Metallo-beta-lactamase superfamily ccrud_RS07995 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ccrud_RS07995 SM00954 Region found in RelA / SpoT proteins ccrud_RS08020 SM01323 ccrud_RS08020 ccrud_RS08025 SM00382 ATPases associated with a variety of cellular activities ccrud_RS08085 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ccrud_RS08150 SM01329 ccrud_RS08150 ccrud_RS08190 SM00341 Helicase and RNase D C-terminal ccrud_RS08190 SM00474 3'-5' exonuclease ccrud_RS08195 SM00861 Transketolase, pyrimidine binding domain ccrud_RS08250 SM00487 DEAD-like helicases superfamily ccrud_RS08280 SM00529 Helix-turn-helix diphteria tox regulatory element ccrud_RS08280 SM00899 ccrud_RS08280 ccrud_RS08300 SM00487 DEAD-like helicases superfamily ccrud_RS08300 SM00490 helicase superfamily c-terminal domain ccrud_RS08315 SM00382 ATPases associated with a variety of cellular activities ccrud_RS08315 SM00487 DEAD-like helicases superfamily ccrud_RS08315 SM00490 helicase superfamily c-terminal domain ccrud_RS08315 SM00847 Helicase associated domain (HA2) Add an annotation ccrud_RS08335 SM00420 helix_turn_helix, Deoxyribose operon repressor ccrud_RS08335 SM01134 ccrud_RS08335 ccrud_RS08350 SM00420 helix_turn_helix, Deoxyribose operon repressor ccrud_RS08350 SM01134 ccrud_RS08350 ccrud_RS08425 SM00729 Elongator protein 3, MiaB family, Radical SAM ccrud_RS08430 SM00382 ATPases associated with a variety of cellular activities ccrud_RS08435 SM00062 Bacterial periplasmic substrate-binding proteins ccrud_RS08455 SM00382 ATPases associated with a variety of cellular activities ccrud_RS08470 SM00382 ATPases associated with a variety of cellular activities ccrud_RS08485 SM00530 Helix-turn-helix XRE-family like proteins ccrud_RS08510 SM00843 ccrud_RS08510 ccrud_RS08545 SM00345 helix_turn_helix gluconate operon transcriptional repressor ccrud_RS08545 SM00895 ccrud_RS08545 ccrud_RS08550 SM00849 Metallo-beta-lactamase superfamily ccrud_RS08555 SM01130 ccrud_RS08555 ccrud_RS08575 SM00316 Ribosomal protein S1-like RNA-binding domain ccrud_RS08575 SM00322 K homology RNA-binding domain ccrud_RS08580 SM01387 ccrud_RS08580 ccrud_RS08590 SM00904 Riboflavin kinase ccrud_RS08665 SM00382 ATPases associated with a variety of cellular activities ccrud_RS08680 SM00327 von Willebrand factor (vWF) type A domain ccrud_RS08685 SM00382 ATPases associated with a variety of cellular activities ccrud_RS08745 SM00421 helix_turn_helix, Lux Regulon ccrud_RS08745 SM00448 cheY-homologous receiver domain ccrud_RS08750 SM00387 Histidine kinase-like ATPases ccrud_RS08760 SM00382 ATPases associated with a variety of cellular activities ccrud_RS08770 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ccrud_RS08790 SM00382 ATPases associated with a variety of cellular activities ccrud_RS08795 SM00729 Elongator protein 3, MiaB family, Radical SAM ccrud_RS08845 SM00382 ATPases associated with a variety of cellular activities ccrud_RS08900 SM00316 Ribosomal protein S1-like RNA-binding domain ccrud_RS08900 SM00732 Likely ribonuclease with RNase H fold. ccrud_RS08905 SM00354 helix_turn _helix lactose operon repressor ccrud_RS08915 SM00998 Adenylosuccinate lyase C-terminus ccrud_RS08965 SM00248 ankyrin repeats ccrud_RS08975 SM00382 ATPases associated with a variety of cellular activities ccrud_RS08980 SM00382 ATPases associated with a variety of cellular activities ccrud_RS08980 SM00962 SRP54-type protein, GTPase domain ccrud_RS08980 SM00963 SRP54-type protein, helical bundle domain ccrud_RS08985 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ccrud_RS08990 SM00938 Nitrogen regulatory protein P-II ccrud_RS09000 SM00382 ATPases associated with a variety of cellular activities ccrud_RS09000 SM00962 SRP54-type protein, GTPase domain ccrud_RS09000 SM00963 SRP54-type protein, helical bundle domain ccrud_RS09060 SM00530 Helix-turn-helix XRE-family like proteins ccrud_RS09070 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain ccrud_RS09070 SM01232 ccrud_RS09070 ccrud_RS09075 SM00358 Double-stranded RNA binding motif ccrud_RS09075 SM00535 Ribonuclease III family ccrud_RS09090 SM00382 ATPases associated with a variety of cellular activities ccrud_RS09095 SM00382 ATPases associated with a variety of cellular activities ccrud_RS09100 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ccrud_RS09225 SM00642 Alpha-amylase domain ccrud_RS09230 SM00382 ATPases associated with a variety of cellular activities ccrud_RS09250 SM00479 ccrud_RS09250 ccrud_RS09260 SM00642 Alpha-amylase domain ccrud_RS09265 SM00954 Region found in RelA / SpoT proteins ccrud_RS09285 SM00363 S4 RNA-binding domain ccrud_RS09300 SM00642 Alpha-amylase domain ccrud_RS09320 SM00481 DNA polymerase alpha chain like domain ccrud_RS09375 SM00382 ATPases associated with a variety of cellular activities ccrud_RS09385 SM00870 ccrud_RS09385 ccrud_RS09400 SM00422 helix_turn_helix, mercury resistance ccrud_RS09440 SM00864 Tubulin/FtsZ family, GTPase domain ccrud_RS09440 SM00865 Tubulin/FtsZ family, C-terminal domain ccrud_RS09540 SM00220 Serine/Threonine protein kinases, catalytic domain ccrud_RS09540 SM00740 ccrud_RS09540 ccrud_RS09580 SM00563 Phosphate acyltransferases ccrud_RS09730 SM00729 Elongator protein 3, MiaB family, Radical SAM ccrud_RS09760 SM01230 ccrud_RS09760 ccrud_RS09815 SM01230 ccrud_RS09815 ccrud_RS09825 SM00880 ccrud_RS09825 ccrud_RS09825 SM01118 ccrud_RS09825 ccrud_RS09840 SM00955 ccrud_RS09840 ccrud_RS09860 SM00855 Phosphoglycerate mutase family ccrud_RS09880 SM00226 Low molecular weight phosphatase family ccrud_RS09905 SM00382 ATPases associated with a variety of cellular activities ccrud_RS09995 SM00400 zinc finger ccrud_RS09995 SM00493 ccrud_RS09995 ccrud_RS09995 SM00766 DNA primase DnaG DnaB-binding ccrud_RS10025 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ccrud_RS10055 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ccrud_RS10090 SM00116 Domain in cystathionine beta-synthase and other proteins. ccrud_RS10090 SM01091 Transporter associated domain ccrud_RS10110 SM00271 DnaJ molecular chaperone homology domain ccrud_RS10120 SM00729 Elongator protein 3, MiaB family, Radical SAM ccrud_RS10150 SM00382 ATPases associated with a variety of cellular activities ccrud_RS10170 SM00642 Alpha-amylase domain ccrud_RS10230 SM00382 ATPases associated with a variety of cellular activities ccrud_RS10245 SM00345 helix_turn_helix gluconate operon transcriptional repressor ccrud_RS10245 SM00866 ccrud_RS10245 ccrud_RS10265 SM00895 ccrud_RS10265 ccrud_RS10295 SM00382 ATPases associated with a variety of cellular activities ccrud_RS10405 SM00838 Elongation factor G C-terminus ccrud_RS10425 SM00248 ankyrin repeats ccrud_RS10440 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ccrud_RS10450 SM00855 Phosphoglycerate mutase family ccrud_RS10465 SM01110 ccrud_RS10465 ccrud_RS10480 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase ccrud_RS10520 SM00316 Ribosomal protein S1-like RNA-binding domain ccrud_RS10540 SM00562 ccrud_RS10540 ccrud_RS10625 SM00382 ATPases associated with a variety of cellular activities ccrud_RS10625 SM00994 ClpX C4-type zinc finger ccrud_RS10625 SM01086 C-terminal, D2-small domain, of ClpB protein ccrud_RS10635 SM00882 Coenzyme A transferase ccrud_RS10640 SM00882 Coenzyme A transferase ccrud_RS10645 SM00346 helix_turn_helix isocitrate lyase regulation ccrud_RS10660 SM00421 helix_turn_helix, Lux Regulon ccrud_RS10695 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ccrud_RS10715 SM00895 ccrud_RS10715 ccrud_RS10725 SM00421 helix_turn_helix, Lux Regulon ccrud_RS10825 SM00822 ccrud_RS10825 ccrud_RS10835 SM00642 Alpha-amylase domain ccrud_RS10840 SM00354 helix_turn _helix lactose operon repressor ccrud_RS10845 SM00382 ATPases associated with a variety of cellular activities ccrud_RS10900 SM00382 ATPases associated with a variety of cellular activities ccrud_RS10965 SM00382 ATPases associated with a variety of cellular activities ccrud_RS10995 SM00382 ATPases associated with a variety of cellular activities ccrud_RS11020 SM00345 helix_turn_helix gluconate operon transcriptional repressor ccrud_RS11020 SM00866 ccrud_RS11020 ccrud_RS11025 SM00382 ATPases associated with a variety of cellular activities ccrud_RS11045 SM00098 Alkaline phosphatase homologues ccrud_RS11055 SM00342 helix_turn_helix, arabinose operon control protein ccrud_RS11065 SM00829 Enoylreductase ccrud_RS11085 SM01001 AIR carboxylase ccrud_RS11100 SM00822 ccrud_RS11100 ccrud_RS11105 SM00479 ccrud_RS11105 ccrud_RS11175 SM00507 HNH nucleases ccrud_RS11220 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ccrud_RS11285 SM00347 helix_turn_helix multiple antibiotic resistance protein ccrud_RS11320 SM00487 DEAD-like helicases superfamily ccrud_RS11320 SM00491 ccrud_RS11320 ccrud_RS11355 SM00345 helix_turn_helix gluconate operon transcriptional repressor ccrud_RS11355 SM00895 ccrud_RS11355 ccrud_RS11395 SM00829 Enoylreductase ccrud_RS11445 SM00382 ATPases associated with a variety of cellular activities ccrud_RS11515 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ccrud_RS11515 SM00421 helix_turn_helix, Lux Regulon ccrud_RS11545 SM00881 CoA binding domain ccrud_RS11595 SM00382 ATPases associated with a variety of cellular activities ccrud_RS11625 SM00046 Diacylglycerol kinase catalytic domain (presumed) ccrud_RS11680 SM01211 ccrud_RS11680 ccrud_RS11720 SM00998 Adenylosuccinate lyase C-terminus ccrud_RS11730 SM01209 ccrud_RS11730 ccrud_RS11730 SM01210 ccrud_RS11730 ccrud_RS11740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ccrud_RS11740 SM00387 Histidine kinase-like ATPases ccrud_RS11740 SM00388 His Kinase A (phosphoacceptor) domain ccrud_RS11745 SM00448 cheY-homologous receiver domain ccrud_RS11745 SM00862 Transcriptional regulatory protein, C terminal ccrud_RS11750 SM00422 helix_turn_helix, mercury resistance ccrud_RS11755 SM01119 ccrud_RS11755 ccrud_RS11790 SM00829 Enoylreductase ccrud_RS11865 SM00354 helix_turn _helix lactose operon repressor ccrud_RS11875 SM00382 ATPases associated with a variety of cellular activities ccrud_RS11905 SM00346 helix_turn_helix isocitrate lyase regulation ccrud_RS11910 SM00967 RNA 2'-O ribose methyltransferase substrate binding ccrud_RS11915 SM00840 ccrud_RS11915 ccrud_RS11925 SM00640 Glycosyl hydrolases family 32 ccrud_RS11940 SM01130 ccrud_RS11940 ccrud_RS11955 SM00345 helix_turn_helix gluconate operon transcriptional repressor ccrud_RS11955 SM00895 ccrud_RS11955 ccrud_RS11970 SM00382 ATPases associated with a variety of cellular activities ccrud_RS11975 SM00382 ATPases associated with a variety of cellular activities ccrud_RS11995 SM01058 CarD-like/TRCF domain ccrud_RS12000 SM00448 cheY-homologous receiver domain ccrud_RS12000 SM00862 Transcriptional regulatory protein, C terminal ccrud_RS12005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ccrud_RS12005 SM00387 Histidine kinase-like ATPases ccrud_RS12005 SM00388 His Kinase A (phosphoacceptor) domain ccrud_RS12015 SM00382 ATPases associated with a variety of cellular activities ccrud_RS12030 SM00947 Carbonic anhydrase ccrud_RS12035 SM00478 endonuclease III ccrud_RS12035 SM00525 ccrud_RS12035 ccrud_RS12050 SM00382 ATPases associated with a variety of cellular activities ccrud_RS12050 SM01086 C-terminal, D2-small domain, of ClpB protein ccrud_RS12055 SM00116 Domain in cystathionine beta-synthase and other proteins. ccrud_RS12055 SM01240 ccrud_RS12055 ccrud_RS12070 SM00342 helix_turn_helix, arabinose operon control protein ccrud_RS12080 SM00116 Domain in cystathionine beta-synthase and other proteins. ccrud_RS12135 SM00905 Dihydroneopterin aldolase ccrud_RS12150 SM00382 ATPases associated with a variety of cellular activities ccrud_RS12200 SM01061 CAT RNA binding domain ccrud_RS12220 SM00450 Rhodanese Homology Domain ccrud_RS12225 SM00347 helix_turn_helix multiple antibiotic resistance protein ccrud_RS12385 SM00155 Phospholipase D. Active site motifs. ccrud_RS12410 SM00382 ATPases associated with a variety of cellular activities ccrud_RS12425 SM00062 Bacterial periplasmic substrate-binding proteins ccrud_RS12430 SM00220 Serine/Threonine protein kinases, catalytic domain ccrud_RS12475 SM00788 Adenylosuccinate synthetase ccrud_RS12520 SM00450 Rhodanese Homology Domain ccrud_RS12540 SM00382 ATPases associated with a variety of cellular activities ccrud_RS12540 SM01086 C-terminal, D2-small domain, of ClpB protein ccrud_RS12595 SM00422 helix_turn_helix, mercury resistance ccrud_RS12600 SM00271 DnaJ molecular chaperone homology domain ccrud_RS12625 SM00829 Enoylreductase ccrud_RS12705 SM00382 ATPases associated with a variety of cellular activities ccrud_RS12710 SM00382 ATPases associated with a variety of cellular activities ccrud_RS12730 SM00382 ATPases associated with a variety of cellular activities ccrud_RS12730 SM00930 ccrud_RS12730 ccrud_RS12745 SM00382 ATPases associated with a variety of cellular activities ccrud_RS12790 SM00244 prohibitin homologues ccrud_RS12820 SM01061 CAT RNA binding domain ccrud_RS12845 SM00984 UDP binding domain ccrud_RS12865 SM00903 Flavin reductase like domain ccrud_RS12885 SM00421 helix_turn_helix, Lux Regulon ccrud_RS12885 SM00448 cheY-homologous receiver domain ccrud_RS12920 SM00091 PAS domain ccrud_RS12920 SM00387 Histidine kinase-like ATPases ccrud_RS12960 SM00382 ATPases associated with a variety of cellular activities ccrud_RS13070 SM00823 Phosphopantetheine attachment site ccrud_RS13070 SM00824 Thioesterase ccrud_RS13070 SM00825 Beta-ketoacyl synthase ccrud_RS13070 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ccrud_RS13080 SM01110 ccrud_RS13080 ccrud_RS13100 SM00507 HNH nucleases ccrud_RS13120 SM00014 Acid phosphatase homologues ccrud_RS13135 SM00014 Acid phosphatase homologues ccrud_RS13155 SM00644 ccrud_RS13155 ccrud_RS13155 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. ccrud_RS13170 SM00563 Phosphate acyltransferases ccrud_RS13180 SM00345 helix_turn_helix gluconate operon transcriptional repressor ccrud_RS13180 SM00866 ccrud_RS13180 ccrud_RS13195 SM00855 Phosphoglycerate mutase family ccrud_RS13290 SM00345 helix_turn_helix gluconate operon transcriptional repressor ccrud_RS13290 SM00895 ccrud_RS13290 ccrud_RS13365 SM00421 helix_turn_helix, Lux Regulon ccrud_RS13365 SM00448 cheY-homologous receiver domain ccrud_RS13370 SM00387 Histidine kinase-like ATPases ccrud_RS13450 SM00345 helix_turn_helix gluconate operon transcriptional repressor ccrud_RS13485 SM00382 ATPases associated with a variety of cellular activities ccrud_RS13525 SM00347 helix_turn_helix multiple antibiotic resistance protein ccrud_RS13545 SM00450 Rhodanese Homology Domain ccrud_RS13560 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain ccrud_RS13560 SM01232 ccrud_RS13560 ccrud_RS13580 SM00829 Enoylreductase ccrud_RS13590 SM00919 Malic enzyme, NAD binding domain ccrud_RS13590 SM01274 ccrud_RS13590 ccrud_RS13635 SM00530 Helix-turn-helix XRE-family like proteins ccrud_RS13730 SM00382 ATPases associated with a variety of cellular activities ccrud_RS13810 SM00346 helix_turn_helix isocitrate lyase regulation ccrud_RS13840 SM00382 ATPases associated with a variety of cellular activities ccrud_RS13840 SM00487 DEAD-like helicases superfamily ccrud_RS13845 SM00829 Enoylreductase ccrud_RS13885 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ccrud_RS13920 SM00646 ccrud_RS13920 ccrud_RS13930 SM00470 ParB-like nuclease domain