locus-tag class description AFK63_RS00005 PF02446 4-alpha-glucanotransferase AFK63_RS00010 PF00313 'Cold-shock' DNA-binding domain AFK63_RS00015 PF01521 Iron-sulphur cluster biosynthesis AFK63_RS00015 PF01106 NifU-like domain AFK63_RS00020 PF00156 Phosphoribosyl transferase domain AFK63_RS00025 PF00561 alpha/beta hydrolase fold AFK63_RS00030 PF07338 Protein of unknown function (DUF1471) AFK63_RS00035 PF09012 FeoC like transcriptional regulator AFK63_RS00040 PF07670 Nucleoside recognition AFK63_RS00040 PF02421 Ferrous iron transport protein B AFK63_RS00040 PF17910 FeoB cytosolic helical domain AFK63_RS00040 PF07664 Ferrous iron transport protein B C terminus AFK63_RS00045 PF04023 FeoA domain AFK63_RS00055 PF17674 HHH domain AFK63_RS00055 PF09371 Tex-like protein N-terminal domain AFK63_RS00055 PF16921 Tex protein YqgF-like domain AFK63_RS00055 PF00575 S1 RNA binding domain AFK63_RS00060 PF03449 Transcription elongation factor, N-terminal AFK63_RS00060 PF01272 Transcription elongation factor, GreA/GreB, C-term AFK63_RS00065 PF00072 Response regulator receiver domain AFK63_RS00065 PF00486 Transcriptional regulatory protein, C terminal AFK63_RS00070 PF00672 HAMP domain AFK63_RS00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS00070 PF00512 His Kinase A (phospho-acceptor) domain AFK63_RS00075 PF01293 Phosphoenolpyruvate carboxykinase AFK63_RS00080 PF13687 Domain of unknown function (DUF4153) AFK63_RS00085 PF01430 Hsp33 protein AFK63_RS00090 PF01479 S4 domain AFK63_RS00095 PF13419 Haloacid dehalogenase-like hydrolase AFK63_RS00100 PF07095 Intracellular growth attenuator protein IgaA AFK63_RS00105 PF00293 NUDIX domain AFK63_RS00110 PF00912 Transglycosylase AFK63_RS00110 PF17092 Penicillin-binding protein OB-like domain AFK63_RS00110 PF00905 Penicillin binding protein transpeptidase domain AFK63_RS00135 PF00263 Bacterial type II and III secretion system protein AFK63_RS00135 PF03958 Bacterial type II/III secretion system short domain AFK63_RS00140 PF01202 Shikimate kinase AFK63_RS00145 PF01761 3-dehydroquinate synthase AFK63_RS00150 PF05036 Sporulation related domain AFK63_RS00155 PF02086 D12 class N6 adenine-specific DNA methyltransferase AFK63_RS00160 PF00834 Ribulose-phosphate 3 epimerase family AFK63_RS00165 PF13419 Haloacid dehalogenase-like hydrolase AFK63_RS00170 PF00579 tRNA synthetases class I (W and Y) AFK63_RS00175 PF00392 Bacterial regulatory proteins, gntR family AFK63_RS00175 PF07702 UTRA domain AFK63_RS00180 PF00294 pfkB family carbohydrate kinase AFK63_RS00185 PF01261 Xylose isomerase-like TIM barrel AFK63_RS00190 PF01380 SIS domain AFK63_RS00195 PF13520 Amino acid permease AFK63_RS00200 PF10414 Sirohaem synthase dimerisation region AFK63_RS00200 PF14824 Sirohaem biosynthesis protein central AFK63_RS00200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AFK63_RS00205 PF01226 Formate/nitrite transporter AFK63_RS00210 PF13806 Rieske-like [2Fe-2S] domain AFK63_RS00215 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AFK63_RS00215 PF18267 Rubredoxin NAD+ reductase C-terminal domain AFK63_RS00215 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AFK63_RS00215 PF04324 BFD-like [2Fe-2S] binding domain AFK63_RS00215 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFK63_RS00220 PF07690 Major Facilitator Superfamily AFK63_RS00225 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AFK63_RS00230 PF02661 Fic/DOC family AFK63_RS00235 PF00117 Glutamine amidotransferase class-I AFK63_RS00240 PF00202 Aminotransferase class-III AFK63_RS00245 PF12805 FUSC-like inner membrane protein yccS AFK63_RS00250 PF00027 Cyclic nucleotide-binding domain AFK63_RS00250 PF13545 Crp-like helix-turn-helix domain AFK63_RS00255 PF02566 OsmC-like protein AFK63_RS00260 PF00485 Phosphoribulokinase / Uridine kinase family AFK63_RS00265 PF06794 Uncharacterised protein family (UPF0270) AFK63_RS00270 PF00561 alpha/beta hydrolase fold AFK63_RS00280 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AFK63_RS00280 PF14572 Phosphoribosyl synthetase-associated domain AFK63_RS00285 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AFK63_RS00295 PF05816 Toxic anion resistance protein (TelA) AFK63_RS00300 PF00005 ABC transporter AFK63_RS00300 PF12848 ABC transporter AFK63_RS00305 PF02525 Flavodoxin-like fold AFK63_RS00310 PF02254 TrkA-N domain AFK63_RS00310 PF00999 Sodium/hydrogen exchanger family AFK63_RS00315 PF09526 Probable metal-binding protein (DUF2387) AFK63_RS00320 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AFK63_RS00325 PF04102 SlyX AFK63_RS00330 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AFK63_RS00330 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AFK63_RS00335 PF08348 YheO-like PAS domain AFK63_RS00335 PF13309 HTH domain AFK63_RS00340 PF02635 DsrE/DsrF-like family AFK63_RS00345 PF02635 DsrE/DsrF-like family AFK63_RS00350 PF04077 DsrH like protein AFK63_RS00355 PF00164 Ribosomal protein S12/S23 AFK63_RS00360 PF00177 Ribosomal protein S7p/S5e AFK63_RS00365 PF03764 Elongation factor G, domain IV AFK63_RS00365 PF03144 Elongation factor Tu domain 2 AFK63_RS00365 PF00679 Elongation factor G C-terminus AFK63_RS00365 PF14492 Elongation Factor G, domain II AFK63_RS00365 PF00009 Elongation factor Tu GTP binding domain AFK63_RS00370 PF00009 Elongation factor Tu GTP binding domain AFK63_RS00370 PF03144 Elongation factor Tu domain 2 AFK63_RS00370 PF03143 Elongation factor Tu C-terminal domain AFK63_RS00380 PF00210 Ferritin-like domain AFK63_RS00385 PF01478 Type IV leader peptidase family AFK63_RS00390 PF00338 Ribosomal protein S10p/S20e AFK63_RS00395 PF00297 Ribosomal protein L3 AFK63_RS00400 PF00573 Ribosomal protein L4/L1 family AFK63_RS00405 PF00276 Ribosomal protein L23 AFK63_RS00410 PF03947 Ribosomal Proteins L2, C-terminal domain AFK63_RS00410 PF00181 Ribosomal Proteins L2, RNA binding domain AFK63_RS00415 PF00203 Ribosomal protein S19 AFK63_RS00420 PF00237 Ribosomal protein L22p/L17e AFK63_RS00425 PF07650 KH domain AFK63_RS00425 PF00189 Ribosomal protein S3, C-terminal domain AFK63_RS00430 PF00252 Ribosomal protein L16p/L10e AFK63_RS00435 PF00831 Ribosomal L29 protein AFK63_RS00440 PF00366 Ribosomal protein S17 AFK63_RS00445 PF00238 Ribosomal protein L14p/L23e AFK63_RS00450 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AFK63_RS00450 PF00467 KOW motif AFK63_RS00455 PF00281 Ribosomal protein L5 AFK63_RS00455 PF00673 ribosomal L5P family C-terminus AFK63_RS00460 PF00253 Ribosomal protein S14p/S29e AFK63_RS00465 PF00410 Ribosomal protein S8 AFK63_RS00470 PF00347 Ribosomal protein L6 AFK63_RS00475 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AFK63_RS00480 PF00333 Ribosomal protein S5, N-terminal domain AFK63_RS00480 PF03719 Ribosomal protein S5, C-terminal domain AFK63_RS00485 PF00327 Ribosomal protein L30p/L7e AFK63_RS00490 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AFK63_RS00495 PF00344 SecY translocase AFK63_RS00500 PF00416 Ribosomal protein S13/S18 AFK63_RS00505 PF00411 Ribosomal protein S11 AFK63_RS00510 PF00163 Ribosomal protein S4/S9 N-terminal domain AFK63_RS00510 PF01479 S4 domain AFK63_RS00515 PF01000 RNA polymerase Rpb3/RpoA insert domain AFK63_RS00515 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AFK63_RS00515 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AFK63_RS00520 PF01196 Ribosomal protein L17 AFK63_RS00525 PF09350 Domain of unknown function (DUF1992) AFK63_RS00530 PF13411 MerR HTH family regulatory protein AFK63_RS00535 PF03889 Alternative ribosome-rescue factor A AFK63_RS00540 PF01741 Large-conductance mechanosensitive channel, MscL AFK63_RS00545 PF02254 TrkA-N domain AFK63_RS00545 PF02080 TrkA-C domain AFK63_RS00550 PF01029 NusB family AFK63_RS00550 PF01189 16S rRNA methyltransferase RsmB/F AFK63_RS00555 PF02911 Formyl transferase, C-terminal domain AFK63_RS00555 PF00551 Formyl transferase AFK63_RS00560 PF01327 Polypeptide deformylase AFK63_RS00565 PF17782 DprA winged helix domain AFK63_RS00565 PF02481 DNA recombination-mediator protein A AFK63_RS00570 PF04361 Protein of unknown function (DUF494) AFK63_RS00580 PF01300 Telomere recombination AFK63_RS00585 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AFK63_RS00585 PF08501 Shikimate dehydrogenase substrate binding domain AFK63_RS00585 PF01488 Shikimate / quinate 5-dehydrogenase AFK63_RS00590 PF07369 Protein of unknown function (DUF1488) AFK63_RS00595 PF00132 Bacterial transferase hexapeptide (six repeats) AFK63_RS00625 PF04204 Homoserine O-succinyltransferase AFK63_RS00630 PF01274 Malate synthase AFK63_RS00635 PF00463 Isocitrate lyase family AFK63_RS00640 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AFK63_RS00645 PF09339 IclR helix-turn-helix domain AFK63_RS00645 PF01614 Bacterial transcriptional regulator AFK63_RS00650 PF02607 B12 binding domain AFK63_RS00650 PF02574 Homocysteine S-methyltransferase AFK63_RS00650 PF00809 Pterin binding enzyme AFK63_RS00650 PF02310 B12 binding domain AFK63_RS00650 PF02965 Vitamin B12 dependent methionine synthase, activation domain AFK63_RS00655 PF02690 Na+/Pi-cotransporter AFK63_RS00660 PF11656 YjbD family (DUF3811) AFK63_RS00665 PF01758 Sodium Bile acid symporter family AFK63_RS00670 PF00158 Sigma-54 interaction domain AFK63_RS00670 PF06956 Regulator of RNA terminal phosphate cyclase AFK63_RS00680 PF01139 tRNA-splicing ligase RtcB AFK63_RS00685 PF10127 RNA repair pathway DNA polymerase beta family AFK63_RS00690 PF00696 Amino acid kinase family AFK63_RS00690 PF01842 ACT domain AFK63_RS00700 PF00342 Phosphoglucose isomerase AFK63_RS00710 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF AFK63_RS00715 PF06251 Capsule biosynthesis GfcC AFK63_RS00720 PF06082 Exopolysaccharide biosynthesis protein YbjH AFK63_RS00725 PF00132 Bacterial transferase hexapeptide (six repeats) AFK63_RS00725 PF14602 Hexapeptide repeat of succinyl-transferase AFK63_RS00725 PF12804 MobA-like NTP transferase domain AFK63_RS00735 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS00740 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS00740 PF14785 Maltose transport system permease protein MalF P2 domain AFK63_RS00745 PF01547 Bacterial extracellular solute-binding protein AFK63_RS00750 PF00005 ABC transporter AFK63_RS00750 PF17912 MalK OB fold domain AFK63_RS00755 PF02264 LamB porin AFK63_RS00760 PF07148 Maltose operon periplasmic protein precursor (MalM) AFK63_RS00765 PF04345 Chorismate lyase AFK63_RS00770 PF01040 UbiA prenyltransferase family AFK63_RS00775 PF01553 Acyltransferase AFK63_RS00780 PF01219 Prokaryotic diacylglycerol kinase AFK63_RS00785 PF00717 Peptidase S24-like AFK63_RS00785 PF01726 LexA DNA binding domain AFK63_RS00790 PF01554 MatE AFK63_RS00795 PF05532 CsbD-like AFK63_RS00800 PF01475 Ferric uptake regulator family AFK63_RS00815 PF01207 Dihydrouridine synthase (Dus) AFK63_RS00820 PF09583 Phage shock protein G (Phageshock_PspG) AFK63_RS00825 PF08240 Alcohol dehydrogenase GroES-like domain AFK63_RS00825 PF00107 Zinc-binding dehydrogenase AFK63_RS00830 PF00772 DnaB-like helicase N terminal domain AFK63_RS00830 PF03796 DnaB-like helicase C terminal domain AFK63_RS00835 PF00842 Alanine racemase, C-terminal domain AFK63_RS00835 PF01168 Alanine racemase, N-terminal domain AFK63_RS00840 PF00155 Aminotransferase class I and II AFK63_RS00845 PF08479 POTRA domain, ShlB-type AFK63_RS00845 PF17287 POTRA domain AFK63_RS00845 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AFK63_RS00850 PF01894 Uncharacterised protein family UPF0047 AFK63_RS00855 PF04237 YjbR AFK63_RS00860 PF04829 Pre-toxin domain with VENN motif AFK63_RS00860 PF05860 haemagglutination activity domain AFK63_RS00860 PF13332 Hemagglutinin repeat AFK63_RS00860 PF13018 Extended Signal Peptide of Type V secretion system AFK63_RS00865 PF17755 UvrA DNA-binding domain AFK63_RS00865 PF00005 ABC transporter AFK63_RS00865 PF17760 UvrA interaction domain AFK63_RS00870 PF00436 Single-strand binding protein family AFK63_RS00875 PF00072 Response regulator receiver domain AFK63_RS00875 PF00990 Diguanylate cyclase, GGDEF domain AFK63_RS00885 PF15940 Family of unknown function AFK63_RS00890 PF12792 CSS motif domain associated with EAL AFK63_RS00890 PF00563 EAL domain AFK63_RS00895 PF12833 Helix-turn-helix domain AFK63_RS00900 PF09278 MerR, DNA binding AFK63_RS00900 PF00376 MerR family regulatory protein AFK63_RS00905 PF13417 Glutathione S-transferase, N-terminal domain AFK63_RS00910 PF00860 Permease family AFK63_RS00915 PF00999 Sodium/hydrogen exchanger family AFK63_RS00920 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AFK63_RS00920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFK63_RS00925 PF00474 Sodium:solute symporter family AFK63_RS00930 PF04341 Protein of unknown function, DUF485 AFK63_RS00935 PF00501 AMP-binding enzyme AFK63_RS00935 PF16177 Acetyl-coenzyme A synthetase N-terminus AFK63_RS00935 PF13193 AMP-binding enzyme C-terminal domain AFK63_RS00940 PF00375 Sodium:dicarboxylate symporter family AFK63_RS00950 PF01848 Hok/gef family AFK63_RS00955 PF00183 Hsp90 protein AFK63_RS00955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS00970 PF05845 Bacterial phosphonate metabolism protein (PhnH) AFK63_RS00975 PF03831 PhnA domain AFK63_RS00975 PF08274 PhnA Zinc-Ribbon AFK63_RS00980 PF00350 Dynamin family AFK63_RS00985 PF13990 YjcZ-like protein AFK63_RS00990 PF03812 2-keto-3-deoxygluconate permease AFK63_RS00995 PF04962 KduI/IolB family AFK63_RS01000 PF02798 Glutathione S-transferase, N-terminal domain AFK63_RS01005 PF03824 High-affinity nickel-transport protein AFK63_RS01025 PF11412 Disulphide bond corrector protein DsbC AFK63_RS01025 PF02683 Cytochrome C biogenesis protein transmembrane region AFK63_RS01030 PF03091 CutA1 divalent ion tolerance protein AFK63_RS01035 PF03605 Anaerobic c4-dicarboxylate membrane transporter AFK63_RS01040 PF10415 Fumarase C C-terminus AFK63_RS01040 PF00206 Lyase AFK63_RS01045 PF04186 FxsA cytoplasmic membrane protein AFK63_RS01050 PF00166 Chaperonin 10 Kd subunit AFK63_RS01055 PF00118 TCP-1/cpn60 chaperonin family AFK63_RS01060 PF13698 Domain of unknown function (DUF4156) AFK63_RS01065 PF04055 Radical SAM superfamily AFK63_RS01070 PF01132 Elongation factor P (EF-P) OB domain AFK63_RS01070 PF09285 Elongation factor P, C-terminal AFK63_RS01070 PF08207 Elongation factor P (EF-P) KOW-like domain AFK63_RS01075 PF08085 Entericidin EcnA/B family AFK63_RS01080 PF00196 Bacterial regulatory proteins, luxR family AFK63_RS01085 PF00893 Small Multidrug Resistance protein AFK63_RS01090 PF08212 Lipocalin-like domain AFK63_RS01095 PF02313 Fumarate reductase subunit D AFK63_RS01100 PF02300 Fumarate reductase subunit C AFK63_RS01105 PF13085 2Fe-2S iron-sulfur cluster binding domain AFK63_RS01105 PF13183 4Fe-4S dicluster domain AFK63_RS01110 PF00890 FAD binding domain AFK63_RS01110 PF02910 Fumarate reductase flavoprotein C-term AFK63_RS01115 PF00152 tRNA synthetases class II (D, K and N) AFK63_RS01120 PF00924 Mechanosensitive ion channel AFK63_RS01120 PF12794 Mechanosensitive ion channel inner membrane domain 1 AFK63_RS01120 PF12795 Mechanosensitive ion channel porin domain AFK63_RS01125 PF02666 Phosphatidylserine decarboxylase AFK63_RS01130 PF03193 RsgA GTPase AFK63_RS01135 PF00929 Exonuclease AFK63_RS01155 PF08331 Domain of unknown function (DUF1730) AFK63_RS01160 PF03853 YjeF-related protein N-terminus AFK63_RS01160 PF01256 Carbohydrate kinase AFK63_RS01165 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AFK63_RS01170 PF01520 N-acetylmuramoyl-L-alanine amidase AFK63_RS01175 PF01119 DNA mismatch repair protein, C-terminal domain AFK63_RS01175 PF08676 MutL C terminal dimerisation domain AFK63_RS01185 PF17209 Hfq protein AFK63_RS01190 PF01926 50S ribosome-binding GTPase AFK63_RS01190 PF13167 GTP-binding GTPase N-terminal AFK63_RS01190 PF16360 GTP-binding GTPase Middle Region AFK63_RS01195 PF01145 SPFH domain / Band 7 family AFK63_RS01195 PF12221 Bacterial membrane protein N terminal AFK63_RS01200 PF01145 SPFH domain / Band 7 family AFK63_RS01205 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AFK63_RS01210 PF00709 Adenylosuccinate synthetase AFK63_RS01215 PF02082 Transcriptional regulator AFK63_RS01220 PF17876 Cold shock domain AFK63_RS01220 PF00773 RNB domain AFK63_RS01220 PF08461 Ribonuclease R winged-helix domain AFK63_RS01220 PF00575 S1 RNA binding domain AFK63_RS01220 PF08206 Ribonuclease B OB domain AFK63_RS01225 PF00588 SpoU rRNA Methylase family AFK63_RS01225 PF08032 RNA 2'-O ribose methyltransferase substrate binding AFK63_RS01230 PF03994 Domain of Unknown Function (DUF350) AFK63_RS01235 PF06693 Protein of unknown function (DUF1190) AFK63_RS01240 PF03738 Glutathionylspermidine synthase preATP-grasp AFK63_RS01245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AFK63_RS01245 PF02770 Acyl-CoA dehydrogenase, middle domain AFK63_RS01245 PF18158 Adaptive response protein AidB N-terminal domain AFK63_RS01250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFK63_RS01250 PF02203 Tar ligand binding domain homologue AFK63_RS01250 PF00672 HAMP domain AFK63_RS01255 PF07338 Protein of unknown function (DUF1471) AFK63_RS01260 PF07338 Protein of unknown function (DUF1471) AFK63_RS01265 PF00326 Prolyl oligopeptidase family AFK63_RS01270 PF01250 Ribosomal protein S6 AFK63_RS01275 PF00436 Single-strand binding protein family AFK63_RS01280 PF01084 Ribosomal protein S18 AFK63_RS01285 PF01281 Ribosomal protein L9, N-terminal domain AFK63_RS01285 PF03948 Ribosomal protein L9, C-terminal domain AFK63_RS01290 PF08525 Opacity-associated protein A N-terminal motif AFK63_RS01290 PF04225 Opacity-associated protein A LysM-like domain AFK63_RS01295 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AFK63_RS01295 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AFK63_RS01300 PF00324 Amino acid permease AFK63_RS01305 PF04405 Domain of Unknown function (DUF542) AFK63_RS01305 PF01814 Hemerythrin HHE cation binding domain AFK63_RS01310 PF02203 Tar ligand binding domain homologue AFK63_RS01310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFK63_RS01310 PF00672 HAMP domain AFK63_RS01315 PF00892 EamA-like transporter family AFK63_RS01325 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AFK63_RS01325 PF12833 Helix-turn-helix domain AFK63_RS01325 PF02805 Metal binding domain of Ada AFK63_RS01325 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AFK63_RS01335 PF05368 NmrA-like family AFK63_RS01340 PF01638 HxlR-like helix-turn-helix AFK63_RS01345 PF00149 Calcineurin-like phosphoesterase AFK63_RS01345 PF02872 5'-nucleotidase, C-terminal domain AFK63_RS01350 PF00459 Inositol monophosphatase family AFK63_RS01355 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AFK63_RS01360 PF06526 Protein of unknown function (DUF1107) AFK63_RS01365 PF00571 CBS domain AFK63_RS01365 PF03471 Transporter associated domain AFK63_RS01365 PF01595 Cyclin M transmembrane N-terminal domain AFK63_RS01375 PF01625 Peptide methionine sulfoxide reductase AFK63_RS01380 PF01103 Surface antigen AFK63_RS01380 PF07244 Surface antigen variable number repeat AFK63_RS01380 PF17243 POTRA domain TamA domain 1 AFK63_RS01385 PF04357 TamB, inner membrane protein subunit of TAM complex AFK63_RS01390 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like AFK63_RS01395 PF00419 Fimbrial protein AFK63_RS01405 PF00577 Outer membrane usher protein AFK63_RS01405 PF13954 PapC N-terminal domain AFK63_RS01405 PF13953 PapC C-terminal domain AFK63_RS01410 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AFK63_RS01410 PF02753 Pili assembly chaperone PapD, C-terminal domain AFK63_RS01420 PF00419 Fimbrial protein AFK63_RS01435 PF04932 O-Antigen ligase AFK63_RS01440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFK63_RS01440 PF00672 HAMP domain AFK63_RS01445 PF00719 Inorganic pyrophosphatase AFK63_RS01450 PF13407 Periplasmic binding protein domain AFK63_RS01455 PF00005 ABC transporter AFK63_RS01460 PF02653 Branched-chain amino acid transport system / permease component AFK63_RS01465 PF02653 Branched-chain amino acid transport system / permease component AFK63_RS01470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFK63_RS01470 PF00672 HAMP domain AFK63_RS01470 PF02203 Tar ligand binding domain homologue AFK63_RS01475 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AFK63_RS01480 PF01225 Mur ligase family, catalytic domain AFK63_RS01480 PF02875 Mur ligase family, glutamate ligase domain AFK63_RS01480 PF08245 Mur ligase middle domain AFK63_RS01490 PF04751 Protein of unknown function (DUF615) AFK63_RS01495 PF01523 Putative modulator of DNA gyrase AFK63_RS01500 PF07361 Cytochrome b562 AFK63_RS01530 PF01979 Amidohydrolase family AFK63_RS01535 PF03841 L-seryl-tRNA selenium transferase AFK63_RS01540 PF07071 KDGP aldolase AFK63_RS01545 PF08279 HTH domain AFK63_RS01545 PF05043 Mga helix-turn-helix domain AFK63_RS01545 PF00874 PRD domain AFK63_RS01545 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AFK63_RS01555 PF13597 Anaerobic ribonucleoside-triphosphate reductase AFK63_RS01555 PF03477 ATP cone domain AFK63_RS01560 PF03466 LysR substrate binding domain AFK63_RS01560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS01565 PF02525 Flavodoxin-like fold AFK63_RS01570 PF11941 Domain of unknown function (DUF3459) AFK63_RS01570 PF00128 Alpha amylase, catalytic domain AFK63_RS01575 PF02378 Phosphotransferase system, EIIC AFK63_RS01575 PF00367 phosphotransferase system, EIIB AFK63_RS01580 PF00356 Bacterial regulatory proteins, lacI family AFK63_RS01590 PF00440 Bacterial regulatory proteins, tetR family AFK63_RS01595 PF04399 Glutaredoxin 2, C terminal domain AFK63_RS01595 PF13417 Glutathione S-transferase, N-terminal domain AFK63_RS01605 PF12883 Protein of unknown function (DUF3828) AFK63_RS01610 PF00248 Aldo/keto reductase family AFK63_RS01615 PF00465 Iron-containing alcohol dehydrogenase AFK63_RS01625 PF06719 AraC-type transcriptional regulator N-terminus AFK63_RS01625 PF12833 Helix-turn-helix domain AFK63_RS01630 PF09335 SNARE associated Golgi protein AFK63_RS01635 PF01053 Cys/Met metabolism PLP-dependent enzyme AFK63_RS01640 PF01618 MotA/TolQ/ExbB proton channel family AFK63_RS01645 PF02472 Biopolymer transport protein ExbD/TolR AFK63_RS01655 PF08220 DeoR-like helix-turn-helix domain AFK63_RS01655 PF00455 DeoR C terminal sensor domain AFK63_RS01675 PF03350 Uncharacterized protein family, UPF0114 AFK63_RS01680 PF00248 Aldo/keto reductase family AFK63_RS01685 PF00924 Mechanosensitive ion channel AFK63_RS01690 PF02264 LamB porin AFK63_RS01695 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AFK63_RS01700 PF02378 Phosphotransferase system, EIIC AFK63_RS01705 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AFK63_RS01710 PF00356 Bacterial regulatory proteins, lacI family AFK63_RS01715 PF09997 Predicted membrane protein (DUF2238) AFK63_RS01720 PF03797 Autotransporter beta-domain AFK63_RS01720 PF12334 Rickettsia outer membrane protein B AFK63_RS01735 PF04474 Protein of unknown function (DUF554) AFK63_RS01740 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AFK63_RS01740 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AFK63_RS01740 PF01276 Orn/Lys/Arg decarboxylase, major domain AFK63_RS01745 PF00072 Response regulator receiver domain AFK63_RS01745 PF12431 Transcriptional regulator AFK63_RS01750 PF17203 Single cache domain 3 AFK63_RS01750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS01755 PF03390 2-hydroxycarboxylate transporter family AFK63_RS01760 PF01557 Fumarylacetoacetate (FAA) hydrolase family AFK63_RS01765 PF08218 Citrate lyase ligase C-terminal domain AFK63_RS01765 PF00583 Acetyltransferase (GNAT) family AFK63_RS01770 PF06857 Malonate decarboxylase delta subunit (MdcD) AFK63_RS01775 PF03328 HpcH/HpaI aldolase/citrate lyase family AFK63_RS01780 PF04223 Citrate lyase, alpha subunit (CitF) AFK63_RS01785 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase AFK63_RS01790 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AFK63_RS01795 PF01464 Transglycosylase SLT domain AFK63_RS01795 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AFK63_RS01800 PF04362 Bacterial Fe(2+) trafficking AFK63_RS01805 PF10576 Iron-sulfur binding domain of endonuclease III AFK63_RS01805 PF00633 Helix-hairpin-helix motif AFK63_RS01805 PF14815 NUDIX domain AFK63_RS01805 PF00730 HhH-GPD superfamily base excision DNA repair protein AFK63_RS01810 PF02390 Putative methyltransferase AFK63_RS01815 PF04320 Protein with unknown function (DUF469) AFK63_RS01820 PF11101 Protein of unknown function (DUF2884) AFK63_RS01840 PF02492 CobW/HypB/UreG, nucleotide-binding domain AFK63_RS01840 PF07683 Cobalamin synthesis protein cobW C-terminal domain AFK63_RS01845 PF04328 Selenoprotein, putative AFK63_RS01850 PF13722 5TM C-terminal transporter carbon starvation CstA AFK63_RS01850 PF02554 Carbon starvation protein CstA AFK63_RS01855 PF02203 Tar ligand binding domain homologue AFK63_RS01855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFK63_RS01855 PF00672 HAMP domain AFK63_RS01860 PF04116 Fatty acid hydroxylase superfamily AFK63_RS01870 PF01593 Flavin containing amine oxidoreductase AFK63_RS01880 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AFK63_RS01885 PF01070 FMN-dependent dehydrogenase AFK63_RS01890 PF00348 Polyprenyl synthetase AFK63_RS01895 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AFK63_RS01905 PF03167 Uracil DNA glycosylase superfamily AFK63_RS01915 PF04542 Sigma-70 region 2 AFK63_RS01915 PF03979 Sigma-70 factor, region 1.1 AFK63_RS01915 PF00140 Sigma-70 factor, region 1.2 AFK63_RS01915 PF04545 Sigma-70, region 4 AFK63_RS01915 PF04546 Sigma-70, non-essential region AFK63_RS01915 PF04539 Sigma-70 region 3 AFK63_RS01920 PF01807 CHC2 zinc finger AFK63_RS01920 PF08278 DNA primase DnaG DnaB-binding AFK63_RS01920 PF10410 DnaB-helicase binding domain of primase AFK63_RS01920 PF08275 DNA primase catalytic core, N-terminal domain AFK63_RS01925 PF01165 Ribosomal protein S21 AFK63_RS01930 PF00814 Glycoprotease family AFK63_RS01935 PF02660 Glycerol-3-phosphate acyltransferase AFK63_RS01940 PF02152 Dihydroneopterin aldolase AFK63_RS01945 PF02673 Bacitracin resistance protein BacA AFK63_RS01950 PF01743 Poly A polymerase head domain AFK63_RS01950 PF01966 HD domain AFK63_RS01950 PF12627 Probable RNA and SrmB- binding site of polymerase A AFK63_RS01955 PF08239 Bacterial SH3 domain AFK63_RS01960 PF01928 CYTH domain AFK63_RS01965 PF08335 GlnD PII-uridylyltransferase AFK63_RS01965 PF03710 Glutamate-ammonia ligase adenylyltransferase AFK63_RS01970 PF01467 Cytidylyltransferase-like AFK63_RS01970 PF00294 pfkB family carbohydrate kinase AFK63_RS01975 PF04380 Membrane fusogenic activity AFK63_RS01980 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AFK63_RS01985 PF02535 ZIP Zinc transporter AFK63_RS01990 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AFK63_RS01995 PF03738 Glutathionylspermidine synthase preATP-grasp AFK63_RS02000 PF06693 Protein of unknown function (DUF1190) AFK63_RS02005 PF02321 Outer membrane efflux protein AFK63_RS02010 PF00293 NUDIX domain AFK63_RS02015 PF06853 Protein of unknown function (DUF1249) AFK63_RS02020 PF00149 Calcineurin-like phosphoesterase AFK63_RS02025 PF05728 Uncharacterised protein family (UPF0227) AFK63_RS02030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS02030 PF01751 Toprim domain AFK63_RS02030 PF00986 DNA gyrase B subunit, carboxyl terminus AFK63_RS02030 PF00204 DNA gyrase B AFK63_RS02035 PF16957 Malonate decarboxylase, alpha subunit, transporter AFK63_RS02040 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AFK63_RS02045 PF06857 Malonate decarboxylase delta subunit (MdcD) AFK63_RS02050 PF01039 Carboxyl transferase domain AFK63_RS02065 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AFK63_RS02070 PF00698 Acyl transferase domain AFK63_RS02075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS02075 PF03466 LysR substrate binding domain AFK63_RS02080 PF00141 Peroxidase AFK63_RS02085 PF03992 Antibiotic biosynthesis monooxygenase AFK63_RS02090 PF02525 Flavodoxin-like fold AFK63_RS02095 PF03989 DNA gyrase C-terminal domain, beta-propeller AFK63_RS02095 PF00521 DNA gyrase/topoisomerase IV, subunit A AFK63_RS02100 PF01553 Acyltransferase AFK63_RS02105 PF00394 Multicopper oxidase AFK63_RS02105 PF07731 Multicopper oxidase AFK63_RS02105 PF07732 Multicopper oxidase AFK63_RS02110 PF06969 HemN C-terminal domain AFK63_RS02110 PF04055 Radical SAM superfamily AFK63_RS02115 PF01725 Ham1 family AFK63_RS02120 PF02594 Uncharacterised ACR, YggU family COG1872 AFK63_RS02125 PF02325 YGGT family AFK63_RS02130 PF01168 Alanine racemase, N-terminal domain AFK63_RS02135 PF00437 Type II/IV secretion system protein AFK63_RS02150 PF03652 Holliday junction resolvase AFK63_RS02155 PF02622 Uncharacterized ACR, COG1678 AFK63_RS02160 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AFK63_RS02160 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AFK63_RS02165 PF04452 RNA methyltransferase AFK63_RS02170 PF04231 Endonuclease I AFK63_RS02175 PF10263 SprT-like family AFK63_RS02175 PF17283 SprT-like zinc ribbon domain AFK63_RS02180 PF03502 Nucleoside-specific channel-forming protein, Tsx AFK63_RS02185 PF00083 Sugar (and other) transporter AFK63_RS02190 PF02772 S-adenosylmethionine synthetase, central domain AFK63_RS02190 PF02773 S-adenosylmethionine synthetase, C-terminal domain AFK63_RS02190 PF00438 S-adenosylmethionine synthetase, N-terminal domain AFK63_RS02195 PF17810 Arginine decarboxylase helical bundle domain AFK63_RS02195 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AFK63_RS02195 PF17944 Arginine decarboxylase C-terminal helical extension AFK63_RS02200 PF00491 Arginase family AFK63_RS02205 PF01435 Peptidase family M48 AFK63_RS02210 PF02780 Transketolase, C-terminal domain AFK63_RS02210 PF00456 Transketolase, thiamine diphosphate binding domain AFK63_RS02210 PF02779 Transketolase, pyrimidine binding domain AFK63_RS02215 PF03747 ADP-ribosylglycohydrolase AFK63_RS02220 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AFK63_RS02220 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AFK63_RS02225 PF00162 Phosphoglycerate kinase AFK63_RS02230 PF01116 Fructose-bisphosphate aldolase class-II AFK63_RS02235 PF00924 Mechanosensitive ion channel AFK63_RS02235 PF05552 Conserved TM helix AFK63_RS02240 PF01810 LysE type translocator AFK63_RS02245 PF04402 Protein of unknown function (DUF541) AFK63_RS02250 PF03466 LysR substrate binding domain AFK63_RS02250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS02255 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AFK63_RS02260 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AFK63_RS02260 PF01842 ACT domain AFK63_RS02260 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AFK63_RS02265 PF01812 5-formyltetrahydrofolate cyclo-ligase family AFK63_RS02270 PF05164 Cell division protein ZapA AFK63_RS02275 PF03695 Uncharacterised protein family (UPF0149) AFK63_RS02280 PF05195 Aminopeptidase P, N-terminal domain AFK63_RS02280 PF00557 Metallopeptidase family M24 AFK63_RS02285 PF01494 FAD binding domain AFK63_RS02290 PF01494 FAD binding domain AFK63_RS02295 PF01571 Aminomethyltransferase folate-binding domain AFK63_RS02295 PF08669 Glycine cleavage T-protein C-terminal barrel domain AFK63_RS02300 PF01597 Glycine cleavage H-protein AFK63_RS02305 PF02347 Glycine cleavage system P-protein AFK63_RS02315 PF00232 Glycosyl hydrolase family 1 AFK63_RS02320 PF01380 SIS domain AFK63_RS02320 PF01418 Helix-turn-helix domain, rpiR family AFK63_RS02325 PF04266 ASCH domain AFK63_RS02330 PF03006 Haemolysin-III related AFK63_RS02335 PF01571 Aminomethyltransferase folate-binding domain AFK63_RS02340 PF03937 Flavinator of succinate dehydrogenase AFK63_RS02345 PF07254 Membrane-bound toxin component of toxin-antitoxin system AFK63_RS02350 PF00258 Flavodoxin AFK63_RS02355 PF00589 Phage integrase family AFK63_RS02355 PF02899 Phage integrase, N-terminal SAM-like domain AFK63_RS02360 PF10411 Disulfide bond isomerase protein N-terminus AFK63_RS02360 PF13098 Thioredoxin-like domain AFK63_RS02365 PF02272 DHHA1 domain AFK63_RS02365 PF01368 DHH family AFK63_RS02365 PF17768 RecJ OB domain AFK63_RS02370 PF03462 PCRF domain AFK63_RS02370 PF00472 RF-1 domain AFK63_RS02375 PF01336 OB-fold nucleic acid binding domain AFK63_RS02375 PF00152 tRNA synthetases class II (D, K and N) AFK63_RS02380 PF01476 LysM domain AFK63_RS02380 PF01551 Peptidase family M23 AFK63_RS02395 PF01810 LysE type translocator AFK63_RS02400 PF15977 Winged helix-turn-helix DNA binding AFK63_RS02405 PF00108 Thiolase, N-terminal domain AFK63_RS02405 PF02803 Thiolase, C-terminal domain AFK63_RS02410 PF06178 Oligogalacturonate-specific porin protein (KdgM) AFK63_RS02415 PF14583 Oligogalacturonate lyase AFK63_RS02430 PF14583 Oligogalacturonate lyase AFK63_RS02440 PF03459 TOBE domain AFK63_RS02440 PF17912 MalK OB fold domain AFK63_RS02440 PF00005 ABC transporter AFK63_RS02445 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS02450 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS02455 PF02706 Chain length determinant protein AFK63_RS02460 PF16867 Dimethlysulfonioproprionate lyase AFK63_RS02465 PF01177 Asp/Glu/Hydantoin racemase AFK63_RS02470 PF03466 LysR substrate binding domain AFK63_RS02470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS02475 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AFK63_RS02475 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AFK63_RS02480 PF00356 Bacterial regulatory proteins, lacI family AFK63_RS02485 PF02378 Phosphotransferase system, EIIC AFK63_RS02490 PF00232 Glycosyl hydrolase family 1 AFK63_RS02495 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AFK63_RS02500 PF07729 FCD domain AFK63_RS02500 PF00392 Bacterial regulatory proteins, gntR family AFK63_RS02510 PF00356 Bacterial regulatory proteins, lacI family AFK63_RS02515 PF00501 AMP-binding enzyme AFK63_RS02515 PF01553 Acyltransferase AFK63_RS02520 PF07690 Major Facilitator Superfamily AFK63_RS02525 PF00248 Aldo/keto reductase family AFK63_RS02530 PF06004 Bacterial protein of unknown function (DUF903) AFK63_RS02535 PF03741 Integral membrane protein TerC family AFK63_RS02540 PF02976 DNA mismatch repair enzyme MutH AFK63_RS02545 PF00293 NUDIX domain AFK63_RS02550 PF02896 PEP-utilising enzyme, TIM barrel domain AFK63_RS02550 PF00391 PEP-utilising enzyme, mobile domain AFK63_RS02550 PF05524 PEP-utilising enzyme, N-terminal AFK63_RS02550 PF01590 GAF domain AFK63_RS02555 PF01790 Prolipoprotein diacylglyceryl transferase AFK63_RS02560 PF00303 Thymidylate synthase AFK63_RS02565 PF07963 Prokaryotic N-terminal methylation motif AFK63_RS02570 PF07963 Prokaryotic N-terminal methylation motif AFK63_RS02575 PF12528 Type II secretion prepilin peptidase dependent protein C AFK63_RS02575 PF07963 Prokaryotic N-terminal methylation motif AFK63_RS02580 PF17946 RecC C-terminal domain AFK63_RS02585 PF16187 Middle or third domain of peptidase_M16 AFK63_RS02585 PF05193 Peptidase M16 inactive domain AFK63_RS02585 PF00675 Insulinase (Peptidase family M16) AFK63_RS02590 PF13361 UvrD-like helicase C-terminal domain AFK63_RS02590 PF00580 UvrD/REP helicase N-terminal domain AFK63_RS02590 PF12705 PD-(D/E)XK nuclease superfamily AFK63_RS02595 PF13538 UvrD-like helicase C-terminal domain AFK63_RS02600 PF00583 Acetyltransferase (GNAT) family AFK63_RS02600 PF00696 Amino acid kinase family AFK63_RS02605 PF01520 N-acetylmuramoyl-L-alanine amidase AFK63_RS02605 PF11741 AMIN domain AFK63_RS02620 PF06725 3D domain AFK63_RS02620 PF03562 MltA specific insert domain AFK63_RS02625 PF00899 ThiF family AFK63_RS02630 PF02657 Fe-S metabolism associated domain AFK63_RS02635 PF00266 Aminotransferase class-V AFK63_RS02640 PF06004 Bacterial protein of unknown function (DUF903) AFK63_RS02645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS02645 PF03466 LysR substrate binding domain AFK63_RS02650 PF04241 Protein of unknown function (DUF423) AFK63_RS02655 PF01728 FtsJ-like methyltransferase AFK63_RS02655 PF18125 RlmM ferredoxin-like domain AFK63_RS02660 PF01367 5'-3' exonuclease, C-terminal SAM fold AFK63_RS02660 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AFK63_RS02665 PF03313 Serine dehydratase alpha chain AFK63_RS02665 PF03315 Serine dehydratase beta chain AFK63_RS02675 PF11892 Domain of unknown function (DUF3412) AFK63_RS02675 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AFK63_RS02675 PF03641 Possible lysine decarboxylase AFK63_RS02680 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AFK63_RS02680 PF14489 QueF-like protein AFK63_RS02685 PF07348 Syd protein (SUKH-2) AFK63_RS02690 PF04287 tRNA pseudouridine synthase C AFK63_RS02695 PF00849 RNA pseudouridylate synthase AFK63_RS02700 PF00258 Flavodoxin AFK63_RS02705 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AFK63_RS02705 PF01627 Hpt domain AFK63_RS02705 PF00512 His Kinase A (phospho-acceptor) domain AFK63_RS02705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS02705 PF00672 HAMP domain AFK63_RS02705 PF00072 Response regulator receiver domain AFK63_RS02710 PF05958 tRNA (Uracil-5-)-methyltransferase AFK63_RS02710 PF01938 TRAM domain AFK63_RS02715 PF13291 ACT domain AFK63_RS02715 PF02824 TGS domain AFK63_RS02715 PF04607 Region found in RelA / SpoT proteins AFK63_RS02720 PF03819 MazG nucleotide pyrophosphohydrolase domain AFK63_RS02725 PF06418 CTP synthase N-terminus AFK63_RS02725 PF00117 Glutamine amidotransferase class-I AFK63_RS02730 PF03952 Enolase, N-terminal domain AFK63_RS02730 PF00113 Enolase, C-terminal TIM barrel domain AFK63_RS02735 PF01380 SIS domain AFK63_RS02735 PF01418 Helix-turn-helix domain, rpiR family AFK63_RS02740 PF02378 Phosphotransferase system, EIIC AFK63_RS02740 PF00367 phosphotransferase system, EIIB AFK63_RS02740 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AFK63_RS02745 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AFK63_RS02750 PF04536 TPM domain AFK63_RS02755 PF04055 Radical SAM superfamily AFK63_RS02760 PF01242 6-pyruvoyl tetrahydropterin synthase AFK63_RS02765 PF00175 Oxidoreductase NAD-binding domain AFK63_RS02765 PF00258 Flavodoxin AFK63_RS02765 PF00667 FAD binding domain AFK63_RS02770 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AFK63_RS02770 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AFK63_RS02775 PF01507 Phosphoadenosine phosphosulfate reductase family AFK63_RS02780 PF04389 Peptidase family M28 AFK63_RS02785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AFK63_RS02785 PF14824 Sirohaem biosynthesis protein central AFK63_RS02785 PF10414 Sirohaem synthase dimerisation region AFK63_RS02790 PF01507 Phosphoadenosine phosphosulfate reductase family AFK63_RS02795 PF00009 Elongation factor Tu GTP binding domain AFK63_RS02805 PF12084 Protein of unknown function (DUF3561) AFK63_RS02810 PF04977 Septum formation initiator AFK63_RS02815 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AFK63_RS02820 PF02542 YgbB family AFK63_RS02825 PF01142 tRNA pseudouridine synthase D (TruD) AFK63_RS02830 PF01975 Survival protein SurE AFK63_RS02840 PF01551 Peptidase family M23 AFK63_RS02840 PF01476 LysM domain AFK63_RS02845 PF00140 Sigma-70 factor, region 1.2 AFK63_RS02845 PF04542 Sigma-70 region 2 AFK63_RS02845 PF04539 Sigma-70 region 3 AFK63_RS02845 PF04545 Sigma-70, region 4 AFK63_RS02855 PF07690 Major Facilitator Superfamily AFK63_RS02860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS02860 PF03466 LysR substrate binding domain AFK63_RS02865 PF01047 MarR family AFK63_RS02870 PF02441 Flavoprotein AFK63_RS02875 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AFK63_RS02885 PF00488 MutS domain V AFK63_RS02885 PF05190 MutS family domain IV AFK63_RS02885 PF05192 MutS domain III AFK63_RS02885 PF05188 MutS domain II AFK63_RS02885 PF01624 MutS domain I AFK63_RS02905 PF00672 HAMP domain AFK63_RS02905 PF02203 Tar ligand binding domain homologue AFK63_RS02905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFK63_RS02915 PF00497 Bacterial extracellular solute-binding proteins, family 3 AFK63_RS02920 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS02925 PF00005 ABC transporter AFK63_RS02930 PF13406 Transglycosylase SLT domain AFK63_RS02935 PF02464 Competence-damaged protein AFK63_RS02940 PF00154 recA bacterial DNA recombination protein AFK63_RS02945 PF02631 RecX family AFK63_RS02950 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AFK63_RS02950 PF02272 DHHA1 domain AFK63_RS02950 PF01411 tRNA synthetases class II (A) AFK63_RS02955 PF02599 Global regulator protein family AFK63_RS02985 PF13419 Haloacid dehalogenase-like hydrolase AFK63_RS02990 PF09335 SNARE associated Golgi protein AFK63_RS02995 PF04262 Glutamate-cysteine ligase AFK63_RS03000 PF02664 S-Ribosylhomocysteinase (LuxS) AFK63_RS03005 PF00990 Diguanylate cyclase, GGDEF domain AFK63_RS03005 PF03707 Bacterial signalling protein N terminal repeat AFK63_RS03005 PF00563 EAL domain AFK63_RS03010 PF07690 Major Facilitator Superfamily AFK63_RS03015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AFK63_RS03015 PF00529 HlyD membrane-fusion protein of T1SS AFK63_RS03020 PF01047 MarR family AFK63_RS03025 PF07690 Major Facilitator Superfamily AFK63_RS03030 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AFK63_RS03035 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS03040 PF00571 CBS domain AFK63_RS03040 PF00005 ABC transporter AFK63_RS03045 PF00268 Ribonucleotide reductase, small chain AFK63_RS03050 PF02867 Ribonucleotide reductase, barrel domain AFK63_RS03050 PF00317 Ribonucleotide reductase, all-alpha domain AFK63_RS03050 PF08343 Ribonucleotide reductase N-terminal AFK63_RS03055 PF07972 NrdI Flavodoxin like AFK63_RS03060 PF00462 Glutaredoxin AFK63_RS03065 PF05957 Bacterial protein of unknown function (DUF883) AFK63_RS03070 PF09400 Protein of unknown function (DUF2002) AFK63_RS03075 PF06610 L-alanine exporter AFK63_RS03095 PF02743 Cache domain AFK63_RS03095 PF00672 HAMP domain AFK63_RS03095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFK63_RS03120 PF00005 ABC transporter AFK63_RS03120 PF00664 ABC transporter transmembrane region AFK63_RS03125 PF00529 HlyD membrane-fusion protein of T1SS AFK63_RS03125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AFK63_RS03130 PF01668 SmpB protein AFK63_RS03135 PF03364 Polyketide cyclase / dehydrase and lipid transport AFK63_RS03140 PF03658 RnfH family Ubiquitin AFK63_RS03145 PF04355 SmpA / OmlA family AFK63_RS03150 PF02463 RecF/RecN/SMC N terminal domain AFK63_RS03155 PF01513 ATP-NAD kinase AFK63_RS03160 PF01025 GrpE AFK63_RS03165 PF01595 Cyclin M transmembrane N-terminal domain AFK63_RS03165 PF03471 Transporter associated domain AFK63_RS03165 PF00571 CBS domain AFK63_RS03170 PF01578 Cytochrome C assembly protein AFK63_RS03175 PF00448 SRP54-type protein, GTPase domain AFK63_RS03175 PF02978 Signal peptide binding domain AFK63_RS03175 PF02881 SRP54-type protein, helical bundle domain AFK63_RS03180 PF00886 Ribosomal protein S16 AFK63_RS03185 PF05239 PRC-barrel domain AFK63_RS03185 PF01782 RimM N-terminal domain AFK63_RS03190 PF01746 tRNA (Guanine-1)-methyltransferase AFK63_RS03195 PF01245 Ribosomal protein L19 AFK63_RS03210 PF00793 DAHP synthetase I family AFK63_RS03215 PF02153 Prephenate dehydrogenase AFK63_RS03215 PF01817 Chorismate mutase type II AFK63_RS03220 PF08450 SMP-30/Gluconolactonase/LRE-like region AFK63_RS03225 PF00800 Prephenate dehydratase AFK63_RS03225 PF01817 Chorismate mutase type II AFK63_RS03230 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AFK63_RS03240 PF13525 Outer membrane lipoprotein AFK63_RS03245 PF00849 RNA pseudouridylate synthase AFK63_RS03245 PF01479 S4 domain AFK63_RS03250 PF02578 Multi-copper polyphenol oxidoreductase laccase AFK63_RS03255 PF10431 C-terminal, D2-small domain, of ClpB protein AFK63_RS03255 PF00004 ATPase family associated with various cellular activities (AAA) AFK63_RS03255 PF07724 AAA domain (Cdc48 subfamily) AFK63_RS03255 PF02861 Clp amino terminal domain, pathogenicity island component AFK63_RS03255 PF17871 AAA lid domain AFK63_RS03280 PF00205 Thiamine pyrophosphate enzyme, central domain AFK63_RS03280 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AFK63_RS03280 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AFK63_RS03290 PF00083 Sugar (and other) transporter AFK63_RS03295 PF10043 Predicted periplasmic lipoprotein (DUF2279) AFK63_RS03300 PF13091 PLD-like domain AFK63_RS03305 PF13380 CoA binding domain AFK63_RS03305 PF13607 Succinyl-CoA ligase like flavodoxin domain AFK63_RS03305 PF00583 Acetyltransferase (GNAT) family AFK63_RS03310 PF03942 DTW domain AFK63_RS03315 PF00085 Thioredoxin AFK63_RS03320 PF08032 RNA 2'-O ribose methyltransferase substrate binding AFK63_RS03320 PF00588 SpoU rRNA Methylase family AFK63_RS03325 PF03167 Uracil DNA glycosylase superfamily AFK63_RS03330 PF01228 Glycine radical AFK63_RS03335 PF00271 Helicase conserved C-terminal domain AFK63_RS03335 PF00270 DEAD/DEAH box helicase AFK63_RS03340 PF05175 Methyltransferase small domain AFK63_RS03345 PF02910 Fumarate reductase flavoprotein C-term AFK63_RS03345 PF00890 FAD binding domain AFK63_RS03350 PF04542 Sigma-70 region 2 AFK63_RS03350 PF08281 Sigma-70, region 4 AFK63_RS03355 PF03872 Anti sigma-E protein RseA, N-terminal domain AFK63_RS03355 PF03873 Anti sigma-E protein RseA, C-terminal domain AFK63_RS03360 PF03888 MucB/RseB N-terminal domain AFK63_RS03360 PF17188 MucB/RseB C-terminal domain AFK63_RS03370 PF00679 Elongation factor G C-terminus AFK63_RS03370 PF03144 Elongation factor Tu domain 2 AFK63_RS03370 PF06421 GTP-binding protein LepA C-terminus AFK63_RS03370 PF00009 Elongation factor Tu GTP binding domain AFK63_RS03375 PF10502 Signal peptidase, peptidase S26 AFK63_RS03380 PF00035 Double-stranded RNA binding motif AFK63_RS03380 PF14622 Ribonuclease-III-like AFK63_RS03385 PF07650 KH domain AFK63_RS03385 PF01926 50S ribosome-binding GTPase AFK63_RS03390 PF11967 Recombination protein O N terminal AFK63_RS03390 PF02565 Recombination protein O C terminal AFK63_RS03395 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AFK63_RS03400 PF01648 4'-phosphopantetheinyl transferase superfamily AFK63_RS03405 PF12838 4Fe-4S dicluster domain AFK63_RS03410 PF01380 SIS domain AFK63_RS03410 PF01418 Helix-turn-helix domain, rpiR family AFK63_RS03415 PF01380 SIS domain AFK63_RS03420 PF00367 phosphotransferase system, EIIB AFK63_RS03420 PF02378 Phosphotransferase system, EIIC AFK63_RS03430 PF01464 Transglycosylase SLT domain AFK63_RS03430 PF00497 Bacterial extracellular solute-binding proteins, family 3 AFK63_RS03435 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AFK63_RS03435 PF02769 AIR synthase related protein, C-terminal domain AFK63_RS03435 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AFK63_RS03440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS03440 PF00512 His Kinase A (phospho-acceptor) domain AFK63_RS03445 PF13942 YfhG lipoprotein AFK63_RS03450 PF00072 Response regulator receiver domain AFK63_RS03450 PF00158 Sigma-54 interaction domain AFK63_RS03455 PF00543 Nitrogen regulatory protein P-II AFK63_RS03460 PF00970 Oxidoreductase FAD-binding domain AFK63_RS03460 PF00042 Globin AFK63_RS03460 PF00175 Oxidoreductase NAD-binding domain AFK63_RS03465 PF00464 Serine hydroxymethyltransferase AFK63_RS03475 PF02627 Carboxymuconolactone decarboxylase family AFK63_RS03480 PF12832 MFS_1 like family AFK63_RS03485 PF00874 PRD domain AFK63_RS03490 PF06226 Protein of unknown function (DUF1007) AFK63_RS03495 PF03824 High-affinity nickel-transport protein AFK63_RS03500 PF00459 Inositol monophosphatase family AFK63_RS03505 PF00588 SpoU rRNA Methylase family AFK63_RS03510 PF02082 Transcriptional regulator AFK63_RS03515 PF00266 Aminotransferase class-V AFK63_RS03520 PF01592 NifU-like N terminal domain AFK63_RS03525 PF01521 Iron-sulphur cluster biosynthesis AFK63_RS03530 PF07743 HSCB C-terminal oligomerisation domain AFK63_RS03535 PF00012 Hsp70 protein AFK63_RS03540 PF00111 2Fe-2S iron-sulfur cluster binding domain AFK63_RS03545 PF04384 Iron-sulphur cluster assembly AFK63_RS03550 PF12404 Peptidase AFK63_RS03550 PF00883 Cytosol aminopeptidase family, catalytic domain AFK63_RS03555 PF14581 SseB protein C-terminal domain AFK63_RS03555 PF07179 SseB protein N-terminal domain AFK63_RS03570 PF01418 Helix-turn-helix domain, rpiR family AFK63_RS03570 PF01380 SIS domain AFK63_RS03575 PF00581 Rhodanese-like domain AFK63_RS03580 PF11975 Family 4 glycosyl hydrolase C-terminal domain AFK63_RS03580 PF02056 Family 4 glycosyl hydrolase AFK63_RS03585 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AFK63_RS03585 PF00367 phosphotransferase system, EIIB AFK63_RS03585 PF02378 Phosphotransferase system, EIIC AFK63_RS03590 PF01835 MG2 domain AFK63_RS03590 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AFK63_RS03590 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AFK63_RS03590 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AFK63_RS03590 PF17962 Bacterial macroglobulin domain 6 AFK63_RS03590 PF00207 Alpha-2-macroglobulin family AFK63_RS03590 PF07678 A-macroglobulin TED domain AFK63_RS03590 PF07703 Alpha-2-macroglobulin bait region domain AFK63_RS03590 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AFK63_RS03595 PF00905 Penicillin binding protein transpeptidase domain AFK63_RS03595 PF00912 Transglycosylase AFK63_RS03595 PF06832 Penicillin-Binding Protein C-terminus Family AFK63_RS03600 PF00334 Nucleoside diphosphate kinase AFK63_RS03605 PF04055 Radical SAM superfamily AFK63_RS03610 PF13464 Domain of unknown function (DUF4115) AFK63_RS03615 PF04551 GcpE protein AFK63_RS03620 PF03129 Anticodon binding domain AFK63_RS03620 PF13393 Histidyl-tRNA synthetase AFK63_RS03625 PF09976 Tetratricopeptide repeat-like domain AFK63_RS03630 PF13360 PQQ-like domain AFK63_RS03635 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AFK63_RS03635 PF01926 50S ribosome-binding GTPase AFK63_RS03640 PF07191 zinc-ribbons AFK63_RS03650 PF01447 Thermolysin metallopeptidase, catalytic domain AFK63_RS03650 PF02868 Thermolysin metallopeptidase, alpha-helical domain AFK63_RS03650 PF16485 Protealysin propeptide AFK63_RS03655 PF02601 Exonuclease VII, large subunit AFK63_RS03655 PF13742 OB-fold nucleic acid binding domain AFK63_RS03660 PF00571 CBS domain AFK63_RS03660 PF00478 IMP dehydrogenase / GMP reductase domain AFK63_RS03665 PF00958 GMP synthase C terminal domain AFK63_RS03665 PF02540 NAD synthase AFK63_RS03665 PF00117 Glutamine amidotransferase class-I AFK63_RS03670 PF13356 Arm DNA-binding domain AFK63_RS03670 PF00589 Phage integrase family AFK63_RS03690 PF01381 Helix-turn-helix AFK63_RS03705 PF00271 Helicase conserved C-terminal domain AFK63_RS03705 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AFK63_RS03705 PF00270 DEAD/DEAH box helicase AFK63_RS03705 PF18074 Primosomal protein N C-terminal domain AFK63_RS03705 PF17764 3′ DNA-binding domain (3′BD) AFK63_RS03715 PF05231 MASE1 AFK63_RS03715 PF00563 EAL domain AFK63_RS03720 PF02541 Ppx/GppA phosphatase family AFK63_RS03725 PF13089 Polyphosphate kinase N-terminal domain AFK63_RS03725 PF17941 Polyphosphate kinase C-terminal domain 1 AFK63_RS03725 PF13090 Polyphosphate kinase C-terminal domain 2 AFK63_RS03725 PF02503 Polyphosphate kinase middle domain AFK63_RS03730 PF00551 Formyl transferase AFK63_RS03735 PF02769 AIR synthase related protein, C-terminal domain AFK63_RS03735 PF00586 AIR synthase related protein, N-terminal domain AFK63_RS03745 PF00860 Permease family AFK63_RS03750 PF00308 Bacterial dnaA protein AFK63_RS03755 PF03960 ArsC family AFK63_RS03760 PF01435 Peptidase family M48 AFK63_RS03765 PF01594 AI-2E family transporter AFK63_RS03770 PF00578 AhpC/TSA family AFK63_RS03775 PF01842 ACT domain AFK63_RS03780 PF00701 Dihydrodipicolinate synthetase family AFK63_RS03785 PF06804 NlpB/DapX lipoprotein AFK63_RS03790 PF01259 SAICAR synthetase AFK63_RS03795 PF04228 Putative neutral zinc metallopeptidase AFK63_RS03800 PF05127 Helicase AFK63_RS03800 PF13718 GNAT acetyltransferase 2 AFK63_RS03800 PF08351 Domain of unknown function (DUF1726) AFK63_RS03800 PF17176 tRNA-binding domain AFK63_RS03805 PF02230 Phospholipase/Carboxylesterase AFK63_RS03810 PF13980 Uncharacterised protein family (UPF0370) AFK63_RS03815 PF01546 Peptidase family M20/M25/M40 AFK63_RS03815 PF07687 Peptidase dimerisation domain AFK63_RS03820 PF03960 ArsC family AFK63_RS03825 PF00583 Acetyltransferase (GNAT) family AFK63_RS03830 PF00873 AcrB/AcrD/AcrF family AFK63_RS03835 PF00072 Response regulator receiver domain AFK63_RS03835 PF00196 Bacterial regulatory proteins, luxR family AFK63_RS03840 PF00293 NUDIX domain AFK63_RS03845 PF06674 Protein of unknown function (DUF1176) AFK63_RS03860 PF02780 Transketolase, C-terminal domain AFK63_RS03860 PF02779 Transketolase, pyrimidine binding domain AFK63_RS03860 PF00456 Transketolase, thiamine diphosphate binding domain AFK63_RS03865 PF00923 Transaldolase/Fructose-6-phosphate aldolase AFK63_RS03870 PF00390 Malic enzyme, N-terminal domain AFK63_RS03870 PF01515 Phosphate acetyl/butaryl transferase AFK63_RS03870 PF03949 Malic enzyme, NAD binding domain AFK63_RS03875 PF00005 ABC transporter AFK63_RS03880 PF01032 FecCD transport family AFK63_RS03885 PF01032 FecCD transport family AFK63_RS03890 PF05977 Transmembrane secretion effector AFK63_RS03895 PF01497 Periplasmic binding protein AFK63_RS03900 PF00425 chorismate binding enzyme AFK63_RS03905 PF00501 AMP-binding enzyme AFK63_RS03905 PF13193 AMP-binding enzyme C-terminal domain AFK63_RS03910 PF00550 Phosphopantetheine attachment site AFK63_RS03910 PF00857 Isochorismatase family AFK63_RS03920 PF03061 Thioesterase superfamily AFK63_RS03925 PF02554 Carbon starvation protein CstA AFK63_RS03925 PF13722 5TM C-terminal transporter carbon starvation CstA AFK63_RS03930 PF04328 Selenoprotein, putative AFK63_RS03945 PF05977 Transmembrane secretion effector AFK63_RS03950 PF00465 Iron-containing alcohol dehydrogenase AFK63_RS03955 PF00005 ABC transporter AFK63_RS03960 PF02653 Branched-chain amino acid transport system / permease component AFK63_RS03975 PF01636 Phosphotransferase enzyme family AFK63_RS03980 PF01008 Initiation factor 2 subunit family AFK63_RS03985 PF01218 Coproporphyrinogen III oxidase AFK63_RS03990 PF01520 N-acetylmuramoyl-L-alanine amidase AFK63_RS03995 PF00583 Acetyltransferase (GNAT) family AFK63_RS04000 PF04076 Bacterial OB fold (BOF) protein AFK63_RS04005 PF11143 Protein of unknown function (DUF2919) AFK63_RS04010 PF06572 Protein of unknown function (DUF1131) AFK63_RS04015 PF04261 Dyp-type peroxidase family AFK63_RS04025 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS04030 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS04035 PF00005 ABC transporter AFK63_RS04040 PF00291 Pyridoxal-phosphate dependent enzyme AFK63_RS04050 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AFK63_RS04055 PF00391 PEP-utilising enzyme, mobile domain AFK63_RS04055 PF05524 PEP-utilising enzyme, N-terminal AFK63_RS04055 PF02896 PEP-utilising enzyme, TIM barrel domain AFK63_RS04060 PF00381 PTS HPr component phosphorylation site AFK63_RS04065 PF00291 Pyridoxal-phosphate dependent enzyme AFK63_RS04075 PF04354 ZipA, C-terminal FtsZ-binding domain AFK63_RS04080 PF00533 BRCA1 C Terminus (BRCT) domain AFK63_RS04080 PF03120 NAD-dependent DNA ligase OB-fold domain AFK63_RS04080 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AFK63_RS04080 PF12826 Helix-hairpin-helix motif AFK63_RS04080 PF01653 NAD-dependent DNA ligase adenylation domain AFK63_RS04085 PF12843 Putative quorum-sensing-regulated virulence factor AFK63_RS04115 PF00749 tRNA synthetases class I (E and Q), catalytic domain AFK63_RS04125 PF07037 Putative transcription regulator (DUF1323) AFK63_RS04140 PF00563 EAL domain AFK63_RS04140 PF05231 MASE1 AFK63_RS04145 PF07662 Na+ dependent nucleoside transporter C-terminus AFK63_RS04145 PF07670 Nucleoside recognition AFK63_RS04145 PF01773 Na+ dependent nucleoside transporter N-terminus AFK63_RS04150 PF01566 Natural resistance-associated macrophage protein AFK63_RS04160 PF00248 Aldo/keto reductase family AFK63_RS04165 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AFK63_RS04165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AFK63_RS04165 PF00205 Thiamine pyrophosphate enzyme, central domain AFK63_RS04170 PF02685 Glucokinase AFK63_RS04175 PF04397 LytTr DNA-binding domain AFK63_RS04175 PF00072 Response regulator receiver domain AFK63_RS04180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS04180 PF06580 Histidine kinase AFK63_RS04180 PF07694 5TMR of 5TMR-LYT AFK63_RS04185 PF07350 Protein of unknown function (DUF1479) AFK63_RS04190 PF00155 Aminotransferase class I and II AFK63_RS04200 PF01544 CorA-like Mg2+ transporter protein AFK63_RS04205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS04205 PF03466 LysR substrate binding domain AFK63_RS04210 PF03306 Alpha-acetolactate decarboxylase AFK63_RS04215 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AFK63_RS04215 PF00205 Thiamine pyrophosphate enzyme, central domain AFK63_RS04215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AFK63_RS04220 PF00106 short chain dehydrogenase AFK63_RS04230 PF00230 Major intrinsic protein AFK63_RS04250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS04250 PF03466 LysR substrate binding domain AFK63_RS04255 PF07690 Major Facilitator Superfamily AFK63_RS04265 PF00456 Transketolase, thiamine diphosphate binding domain AFK63_RS04270 PF02780 Transketolase, C-terminal domain AFK63_RS04270 PF02779 Transketolase, pyrimidine binding domain AFK63_RS04295 PF01226 Formate/nitrite transporter AFK63_RS04300 PF00005 ABC transporter AFK63_RS04305 PF03379 CcmB protein AFK63_RS04310 PF01578 Cytochrome C assembly protein AFK63_RS04315 PF04995 Heme exporter protein D (CcmD) AFK63_RS04320 PF03100 CcmE AFK63_RS04325 PF01578 Cytochrome C assembly protein AFK63_RS04325 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AFK63_RS04330 PF08534 Redoxin AFK63_RS04335 PF03918 Cytochrome C biogenesis protein AFK63_RS04340 PF03918 Cytochrome C biogenesis protein AFK63_RS04345 PF04333 MlaA lipoprotein AFK63_RS04350 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AFK63_RS04355 PF04175 Protein of unknown function (DUF406) AFK63_RS04360 PF00108 Thiolase, N-terminal domain AFK63_RS04360 PF02803 Thiolase, C-terminal domain AFK63_RS04365 PF00378 Enoyl-CoA hydratase/isomerase AFK63_RS04365 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AFK63_RS04365 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AFK63_RS04370 PF00300 Histidine phosphatase superfamily (branch 1) AFK63_RS04375 PF01713 Smr domain AFK63_RS04380 PF05175 Methyltransferase small domain AFK63_RS04385 PF01264 Chorismate synthase AFK63_RS04390 PF03411 Penicillin-insensitive murein endopeptidase AFK63_RS04395 PF01925 Sulfite exporter TauE/SafE AFK63_RS04400 PF04315 Elongation factor P hydroxylase AFK63_RS04405 PF08891 YfcL protein AFK63_RS04410 PF01266 FAD dependent oxidoreductase AFK63_RS04410 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AFK63_RS04415 PF02801 Beta-ketoacyl synthase, C-terminal domain AFK63_RS04415 PF00109 Beta-ketoacyl synthase, N-terminal domain AFK63_RS04420 PF00082 Subtilase family AFK63_RS04420 PF03797 Autotransporter beta-domain AFK63_RS04420 PF12951 Passenger-associated-transport-repeat AFK63_RS04430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AFK63_RS04430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AFK63_RS04430 PF11890 Domain of unknown function (DUF3410) AFK63_RS04435 PF01118 Semialdehyde dehydrogenase, NAD binding domain AFK63_RS04435 PF02774 Semialdehyde dehydrogenase, dimerisation domain AFK63_RS04440 PF01416 tRNA pseudouridine synthase AFK63_RS04445 PF09335 SNARE associated Golgi protein AFK63_RS04450 PF17848 Acetyl-coA carboxylase zinc finger domain AFK63_RS04450 PF01039 Carboxyl transferase domain AFK63_RS04455 PF08245 Mur ligase middle domain AFK63_RS04455 PF02875 Mur ligase family, glutamate ligase domain AFK63_RS04460 PF05036 Sporulation related domain AFK63_RS04465 PF02674 Colicin V production protein AFK63_RS04470 PF00156 Phosphoribosyl transferase domain AFK63_RS04475 PF02441 Flavoprotein AFK63_RS04480 PF00497 Bacterial extracellular solute-binding proteins, family 3 AFK63_RS04485 PF00497 Bacterial extracellular solute-binding proteins, family 3 AFK63_RS04490 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS04495 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS04500 PF00005 ABC transporter AFK63_RS04515 PF08338 Domain of unknown function (DUF1731) AFK63_RS04515 PF01370 NAD dependent epimerase/dehydratase family AFK63_RS04520 PF02798 Glutathione S-transferase, N-terminal domain AFK63_RS04520 PF00043 Glutathione S-transferase, C-terminal domain AFK63_RS04525 PF14834 Glutathione S-transferase, C-terminal domain AFK63_RS04525 PF02798 Glutathione S-transferase, N-terminal domain AFK63_RS04530 PF12850 Calcineurin-like phosphoesterase superfamily domain AFK63_RS04535 PF00293 NUDIX domain AFK63_RS04540 PF00440 Bacterial regulatory proteins, tetR family AFK63_RS04540 PF16295 Tetracyclin repressor-like, C-terminal domain AFK63_RS04545 PF12833 Helix-turn-helix domain AFK63_RS04550 PF06643 Protein of unknown function (DUF1158) AFK63_RS04555 PF01515 Phosphate acetyl/butaryl transferase AFK63_RS04555 PF07085 DRTGG domain AFK63_RS04560 PF00871 Acetokinase family AFK63_RS04565 PF04217 Protein of unknown function, DUF412 AFK63_RS04570 PF03887 YfbU domain AFK63_RS04575 PF13419 Haloacid dehalogenase-like hydrolase AFK63_RS04580 PF03600 Citrate transporter AFK63_RS04580 PF02080 TrkA-C domain AFK63_RS04590 PF00155 Aminotransferase class I and II AFK63_RS04595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS04595 PF03466 LysR substrate binding domain AFK63_RS04600 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AFK63_RS04605 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AFK63_RS04610 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AFK63_RS04610 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AFK63_RS04620 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AFK63_RS04620 PF10531 SLBB domain AFK63_RS04620 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AFK63_RS04625 PF00384 Molybdopterin oxidoreductase AFK63_RS04625 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AFK63_RS04625 PF01568 Molydopterin dinucleotide binding domain AFK63_RS04625 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AFK63_RS04630 PF00146 NADH dehydrogenase AFK63_RS04635 PF12838 4Fe-4S dicluster domain AFK63_RS04640 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AFK63_RS04645 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AFK63_RS04650 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AFK63_RS04650 PF00361 Proton-conducting membrane transporter AFK63_RS04655 PF00361 Proton-conducting membrane transporter AFK63_RS04660 PF00361 Proton-conducting membrane transporter AFK63_RS04665 PF12706 Beta-lactamase superfamily domain AFK63_RS04670 PF13673 Acetyltransferase (GNAT) domain AFK63_RS04675 PF05957 Bacterial protein of unknown function (DUF883) AFK63_RS04680 PF00425 chorismate binding enzyme AFK63_RS04685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AFK63_RS04685 PF16582 Middle domain of thiamine pyrophosphate AFK63_RS04685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AFK63_RS04690 PF12697 Alpha/beta hydrolase family AFK63_RS04695 PF00378 Enoyl-CoA hydratase/isomerase AFK63_RS04700 PF13378 Enolase C-terminal domain-like AFK63_RS04705 PF13193 AMP-binding enzyme C-terminal domain AFK63_RS04705 PF00501 AMP-binding enzyme AFK63_RS04710 PF09997 Predicted membrane protein (DUF2238) AFK63_RS04715 PF01970 Tripartite tricarboxylate transporter TctA family AFK63_RS04730 PF00486 Transcriptional regulatory protein, C terminal AFK63_RS04730 PF00072 Response regulator receiver domain AFK63_RS04735 PF00512 His Kinase A (phospho-acceptor) domain AFK63_RS04735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS04740 PF07437 YfaZ precursor AFK63_RS04745 PF00994 Probable molybdopterin binding domain AFK63_RS04750 PF07690 Major Facilitator Superfamily AFK63_RS04755 PF03009 Glycerophosphoryl diester phosphodiesterase family AFK63_RS04760 PF00111 2Fe-2S iron-sulfur cluster binding domain AFK63_RS04765 PF00268 Ribonucleotide reductase, small chain AFK63_RS04770 PF00317 Ribonucleotide reductase, all-alpha domain AFK63_RS04770 PF02867 Ribonucleotide reductase, barrel domain AFK63_RS04770 PF03477 ATP cone domain AFK63_RS04780 PF03989 DNA gyrase C-terminal domain, beta-propeller AFK63_RS04780 PF00521 DNA gyrase/topoisomerase IV, subunit A AFK63_RS04785 PF00512 His Kinase A (phospho-acceptor) domain AFK63_RS04785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS04785 PF09456 RcsC Alpha-Beta-Loop (ABL) AFK63_RS04785 PF00072 Response regulator receiver domain AFK63_RS04790 PF00196 Bacterial regulatory proteins, luxR family AFK63_RS04790 PF00072 Response regulator receiver domain AFK63_RS04795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS04795 PF01627 Hpt domain AFK63_RS04795 PF16359 RcsD-ABL domain AFK63_RS04800 PF00267 Gram-negative porin AFK63_RS04805 PF02424 ApbE family AFK63_RS04810 PF12833 Helix-turn-helix domain AFK63_RS04810 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AFK63_RS04810 PF02805 Metal binding domain of Ada AFK63_RS04810 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AFK63_RS04815 PF13532 2OG-Fe(II) oxygenase superfamily AFK63_RS04820 PF00005 ABC transporter AFK63_RS04825 PF00916 Sulfate permease family AFK63_RS04825 PF01740 STAS domain AFK63_RS04830 PF01590 GAF domain AFK63_RS04830 PF00158 Sigma-54 interaction domain AFK63_RS04835 PF00753 Metallo-beta-lactamase superfamily AFK63_RS04835 PF00258 Flavodoxin AFK63_RS04835 PF00301 Rubredoxin AFK63_RS04840 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFK63_RS04840 PF18113 Rubredoxin binding C-terminal domain AFK63_RS04850 PF09313 Domain of unknown function (DUF1971) AFK63_RS04855 PF02384 N-6 DNA Methylase AFK63_RS04860 PF01420 Type I restriction modification DNA specificity domain AFK63_RS04870 PF02311 AraC-like ligand binding domain AFK63_RS04870 PF12833 Helix-turn-helix domain AFK63_RS04875 PF00117 Glutamine amidotransferase class-I AFK63_RS04895 PF11893 Domain of unknown function (DUF3413) AFK63_RS04895 PF00884 Sulfatase AFK63_RS04900 PF07208 Protein of unknown function (DUF1414) AFK63_RS04905 PF04245 37-kD nucleoid-associated bacterial protein AFK63_RS04910 PF01386 Ribosomal L25p family AFK63_RS04915 PF04851 Type III restriction enzyme, res subunit AFK63_RS04915 PF00271 Helicase conserved C-terminal domain AFK63_RS04920 PF01479 S4 domain AFK63_RS04920 PF00849 RNA pseudouridylate synthase AFK63_RS04925 PF07690 Major Facilitator Superfamily AFK63_RS04930 PF13989 YejG-like protein AFK63_RS04935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AFK63_RS04935 PF00005 ABC transporter AFK63_RS04940 PF12911 N-terminal TM domain of oligopeptide transport permease C AFK63_RS04940 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS04945 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS04950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AFK63_RS04955 PF00563 EAL domain AFK63_RS04955 PF12792 CSS motif domain associated with EAL AFK63_RS04960 PF00877 NlpC/P60 family AFK63_RS04965 PF01569 PAP2 superfamily AFK63_RS04970 PF07683 Cobalamin synthesis protein cobW C-terminal domain AFK63_RS04970 PF02492 CobW/HypB/UreG, nucleotide-binding domain AFK63_RS04975 PF01232 Mannitol dehydrogenase Rossmann domain AFK63_RS04975 PF08125 Mannitol dehydrogenase C-terminal domain AFK63_RS04980 PF03786 D-mannonate dehydratase (UxuA) AFK63_RS04985 PF09285 Elongation factor P, C-terminal AFK63_RS04985 PF08207 Elongation factor P (EF-P) KOW-like domain AFK63_RS04985 PF01132 Elongation factor P (EF-P) OB domain AFK63_RS04995 PF03692 Putative zinc- or iron-chelating domain AFK63_RS05000 PF07690 Major Facilitator Superfamily AFK63_RS05005 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AFK63_RS05005 PF00381 PTS HPr component phosphorylation site AFK63_RS05010 PF00294 pfkB family carbohydrate kinase AFK63_RS05015 PF02378 Phosphotransferase system, EIIC AFK63_RS05015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AFK63_RS05020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AFK63_RS05020 PF01261 Xylose isomerase-like TIM barrel AFK63_RS05025 PF01261 Xylose isomerase-like TIM barrel AFK63_RS05030 PF03601 Conserved hypothetical protein 698 AFK63_RS05035 PF03466 LysR substrate binding domain AFK63_RS05035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS05040 PF00324 Amino acid permease AFK63_RS05045 PF00756 Putative esterase AFK63_RS05050 PF06779 Uncharacterised MFS-type transporter YbfB AFK63_RS05055 PF01227 GTP cyclohydrolase I AFK63_RS05060 PF04235 Protein of unknown function (DUF418) AFK63_RS05065 PF00356 Bacterial regulatory proteins, lacI family AFK63_RS05070 PF13407 Periplasmic binding protein domain AFK63_RS05075 PF00005 ABC transporter AFK63_RS05080 PF02653 Branched-chain amino acid transport system / permease component AFK63_RS05085 PF02698 DUF218 domain AFK63_RS05090 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AFK63_RS05090 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region AFK63_RS05095 PF04172 LrgB-like family AFK63_RS05100 PF03788 LrgA family AFK63_RS05105 PF01207 Dihydrouridine synthase (Dus) AFK63_RS05110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS05110 PF03466 LysR substrate binding domain AFK63_RS05115 PF00753 Metallo-beta-lactamase superfamily AFK63_RS05125 PF09335 SNARE associated Golgi protein AFK63_RS05130 PF04893 Yip1 domain AFK63_RS05135 PF00768 D-alanyl-D-alanine carboxypeptidase AFK63_RS05145 PF01565 FAD binding domain AFK63_RS05145 PF09330 D-lactate dehydrogenase, membrane binding AFK63_RS05150 PF01915 Glycosyl hydrolase family 3 C-terminal domain AFK63_RS05150 PF14310 Fibronectin type III-like domain AFK63_RS05150 PF00933 Glycosyl hydrolase family 3 N terminal domain AFK63_RS05155 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AFK63_RS05160 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS05165 PF00005 ABC transporter AFK63_RS05170 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS05175 PF13411 MerR HTH family regulatory protein AFK63_RS05180 PF09334 tRNA synthetases class I (M) AFK63_RS05180 PF01588 Putative tRNA binding domain AFK63_RS05185 PF01966 HD domain AFK63_RS05195 PF10609 NUBPL iron-transfer P-loop NTPase AFK63_RS05205 PF06580 Histidine kinase AFK63_RS05205 PF07694 5TMR of 5TMR-LYT AFK63_RS05210 PF04397 LytTr DNA-binding domain AFK63_RS05210 PF00072 Response regulator receiver domain AFK63_RS05215 PF02203 Tar ligand binding domain homologue AFK63_RS05215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFK63_RS05215 PF00672 HAMP domain AFK63_RS05225 PF12848 ABC transporter AFK63_RS05225 PF00005 ABC transporter AFK63_RS05230 PF11776 Nickel/cobalt transporter regulator AFK63_RS05240 PF02110 Hydroxyethylthiazole kinase family AFK63_RS05245 PF08543 Phosphomethylpyrimidine kinase AFK63_RS05250 PF01791 DeoC/LacD family aldolase AFK63_RS05255 PF00781 Diacylglycerol kinase catalytic domain AFK63_RS05260 PF16325 Peptidase family U32 C-terminal domain AFK63_RS05260 PF01136 Peptidase family U32 AFK63_RS05265 PF00486 Transcriptional regulatory protein, C terminal AFK63_RS05265 PF00072 Response regulator receiver domain AFK63_RS05270 PF00672 HAMP domain AFK63_RS05270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS05270 PF00512 His Kinase A (phospho-acceptor) domain AFK63_RS05275 PF07690 Major Facilitator Superfamily AFK63_RS05280 PF00873 AcrB/AcrD/AcrF family AFK63_RS05285 PF00873 AcrB/AcrD/AcrF family AFK63_RS05290 PF13533 Biotin-lipoyl like AFK63_RS05295 PF05973 Phage derived protein Gp49-like (DUF891) AFK63_RS05305 PF00012 Hsp70 protein AFK63_RS05310 PF00730 HhH-GPD superfamily base excision DNA repair protein AFK63_RS05310 PF06029 AlkA N-terminal domain AFK63_RS05315 PF08448 PAS fold AFK63_RS05315 PF08447 PAS fold AFK63_RS05315 PF00990 Diguanylate cyclase, GGDEF domain AFK63_RS05315 PF05231 MASE1 AFK63_RS05315 PF00563 EAL domain AFK63_RS05315 PF13426 PAS domain AFK63_RS05320 PF00485 Phosphoribulokinase / Uridine kinase family AFK63_RS05325 PF00692 dUTPase AFK63_RS05330 PF05170 AsmA family AFK63_RS05335 PF00571 CBS domain AFK63_RS05335 PF03471 Transporter associated domain AFK63_RS05335 PF03741 Integral membrane protein TerC family AFK63_RS05340 PF02563 Polysaccharide biosynthesis/export protein AFK63_RS05340 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AFK63_RS05340 PF10531 SLBB domain AFK63_RS05345 PF01451 Low molecular weight phosphotyrosine protein phosphatase AFK63_RS05350 PF13807 G-rich domain on putative tyrosine kinase AFK63_RS05350 PF02706 Chain length determinant protein AFK63_RS05350 PF13614 AAA domain AFK63_RS05355 PF00535 Glycosyl transferase family 2 AFK63_RS05360 PF00132 Bacterial transferase hexapeptide (six repeats) AFK63_RS05365 PF00534 Glycosyl transferases group 1 AFK63_RS05365 PF13439 Glycosyltransferase Family 4 AFK63_RS05375 PF00535 Glycosyl transferase family 2 AFK63_RS05380 PF00132 Bacterial transferase hexapeptide (six repeats) AFK63_RS05385 PF16363 GDP-mannose 4,6 dehydratase AFK63_RS05390 PF01370 NAD dependent epimerase/dehydratase family AFK63_RS05395 PF00293 NUDIX domain AFK63_RS05400 PF13579 Glycosyl transferase 4-like domain AFK63_RS05400 PF00534 Glycosyl transferases group 1 AFK63_RS05405 PF00483 Nucleotidyl transferase AFK63_RS05405 PF01050 Mannose-6-phosphate isomerase AFK63_RS05410 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AFK63_RS05410 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AFK63_RS05410 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AFK63_RS05410 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AFK63_RS05415 PF02397 Bacterial sugar transferase AFK63_RS05425 PF04230 Polysaccharide pyruvyl transferase AFK63_RS05430 PF13439 Glycosyltransferase Family 4 AFK63_RS05430 PF00534 Glycosyl transferases group 1 AFK63_RS05440 PF00483 Nucleotidyl transferase AFK63_RS05445 PF16363 GDP-mannose 4,6 dehydratase AFK63_RS05450 PF04321 RmlD substrate binding domain AFK63_RS05455 PF00483 Nucleotidyl transferase AFK63_RS05460 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AFK63_RS05465 PF05523 WxcM-like, C-terminal AFK63_RS05470 PF00132 Bacterial transferase hexapeptide (six repeats) AFK63_RS05475 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AFK63_RS05480 PF01943 Polysaccharide biosynthesis protein AFK63_RS05500 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AFK63_RS05500 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AFK63_RS05505 PF02706 Chain length determinant protein AFK63_RS05510 PF01502 Phosphoribosyl-AMP cyclohydrolase AFK63_RS05510 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AFK63_RS05515 PF00977 Histidine biosynthesis protein AFK63_RS05520 PF00977 Histidine biosynthesis protein AFK63_RS05525 PF00117 Glutamine amidotransferase class-I AFK63_RS05530 PF00475 Imidazoleglycerol-phosphate dehydratase AFK63_RS05535 PF00155 Aminotransferase class I and II AFK63_RS05540 PF00815 Histidinol dehydrogenase AFK63_RS05545 PF01634 ATP phosphoribosyltransferase AFK63_RS05545 PF08029 HisG, C-terminal domain AFK63_RS05550 PF01370 NAD dependent epimerase/dehydratase family AFK63_RS05555 PF07722 Peptidase C26 AFK63_RS05560 PF00202 Aminotransferase class-III AFK63_RS05565 PF13520 Amino acid permease AFK63_RS05570 PF00929 Exonuclease AFK63_RS05570 PF08411 Exonuclease C-terminal AFK63_RS05580 PF07943 Penicillin-binding protein 5, C-terminal domain AFK63_RS05580 PF00768 D-alanyl-D-alanine carboxypeptidase AFK63_RS05585 PF06445 GyrI-like small molecule binding domain AFK63_RS05590 PF04632 Fusaric acid resistance protein family AFK63_RS05595 PF04363 Protein of unknown function (DUF496) AFK63_RS05605 PF13356 Arm DNA-binding domain AFK63_RS05605 PF00589 Phage integrase family AFK63_RS05615 PF01554 MatE AFK63_RS05635 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AFK63_RS05635 PF01048 Phosphorylase superfamily AFK63_RS05640 PF04940 Sensors of blue-light using FAD AFK63_RS05640 PF00563 EAL domain AFK63_RS05645 PF00296 Luciferase-like monooxygenase AFK63_RS05655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS05655 PF03466 LysR substrate binding domain AFK63_RS05660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS05660 PF03466 LysR substrate binding domain AFK63_RS05665 PF00083 Sugar (and other) transporter AFK63_RS05665 PF07690 Major Facilitator Superfamily AFK63_RS05675 PF06167 Glucose-regulated metallo-peptidase M90 AFK63_RS05690 PF00360 Phytochrome region AFK63_RS05690 PF00990 Diguanylate cyclase, GGDEF domain AFK63_RS05690 PF00563 EAL domain AFK63_RS05690 PF01590 GAF domain AFK63_RS05695 PF03466 LysR substrate binding domain AFK63_RS05695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS05705 PF00106 short chain dehydrogenase AFK63_RS05715 PF02872 5'-nucleotidase, C-terminal domain AFK63_RS05715 PF00149 Calcineurin-like phosphoesterase AFK63_RS05725 PF06183 DinI-like family AFK63_RS05730 PF00267 Gram-negative porin AFK63_RS05735 PF01966 HD domain AFK63_RS05740 PF18284 DNA methylase N-terminal domain AFK63_RS05740 PF00145 C-5 cytosine-specific DNA methylase AFK63_RS05745 PF03852 DNA mismatch endonuclease Vsr AFK63_RS05750 PF00892 EamA-like transporter family AFK63_RS05755 PF05661 Protein of unknown function (DUF808) AFK63_RS05760 PF09926 Uncharacterized small protein (DUF2158) AFK63_RS05765 PF00990 Diguanylate cyclase, GGDEF domain AFK63_RS05765 PF17151 Periplasmic sensor domain AFK63_RS05775 PF10733 Protein of unknown function (DUF2525) AFK63_RS05780 PF10781 Dextransucrase DSRB AFK63_RS05785 PF00196 Bacterial regulatory proteins, luxR family AFK63_RS05790 PF01311 Bacterial export proteins, family 1 AFK63_RS05795 PF01313 Bacterial export proteins, family 3 AFK63_RS05800 PF00813 FliP family AFK63_RS05805 PF04347 Flagellar biosynthesis protein, FliO AFK63_RS05810 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AFK63_RS05810 PF16973 Flagellar motor switch protein FliN N-terminal AFK63_RS05815 PF02154 Flagellar motor switch protein FliM AFK63_RS05815 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AFK63_RS05820 PF03748 Flagellar basal body-associated protein FliL AFK63_RS05825 PF02120 Flagellar hook-length control protein FliK AFK63_RS05830 PF02050 Flagellar FliJ protein AFK63_RS05835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AFK63_RS05835 PF18269 T3SS EscN ATPase C-terminal domain AFK63_RS05840 PF02108 Flagellar assembly protein FliH AFK63_RS05845 PF14842 FliG N-terminal domain AFK63_RS05845 PF14841 FliG middle domain AFK63_RS05845 PF01706 FliG C-terminal domain AFK63_RS05850 PF08345 Flagellar M-ring protein C-terminal AFK63_RS05850 PF01514 Secretory protein of YscJ/FliF family AFK63_RS05855 PF02049 Flagellar hook-basal body complex protein FliE AFK63_RS05860 PF02586 SOS response associated peptidase (SRAP) AFK63_RS05865 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AFK63_RS05865 PF13296 Putative type VI secretion system Rhs element Vgr AFK63_RS05865 PF04717 Type VI secretion system, phage-baseplate injector AFK63_RS05875 PF01206 Sulfurtransferase TusA AFK63_RS05880 PF04143 Sulphur transport AFK63_RS05885 PF13987 YedD-like protein AFK63_RS05890 PF05400 Flagellar protein FliT AFK63_RS05895 PF02561 Flagellar protein FliS AFK63_RS05900 PF07195 Flagellar hook-associated protein 2 C-terminus AFK63_RS05900 PF02465 Flagellar hook-associated protein 2 N-terminus AFK63_RS05905 PF00669 Bacterial flagellin N-terminal helical region AFK63_RS05905 PF08884 Flagellin D3 domain AFK63_RS05905 PF00700 Bacterial flagellin C-terminal helical region AFK63_RS05905 PF08884 Flagellin D3 domain AFK63_RS05905 PF00700 Bacterial flagellin C-terminal helical region AFK63_RS05905 PF00669 Bacterial flagellin N-terminal helical region AFK63_RS05920 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AFK63_RS05945 PF00456 Transketolase, thiamine diphosphate binding domain AFK63_RS05950 PF02780 Transketolase, C-terminal domain AFK63_RS05950 PF02779 Transketolase, pyrimidine binding domain AFK63_RS05955 PF13193 AMP-binding enzyme C-terminal domain AFK63_RS05955 PF00501 AMP-binding enzyme AFK63_RS05970 PF04545 Sigma-70, region 4 AFK63_RS05970 PF04539 Sigma-70 region 3 AFK63_RS05970 PF04542 Sigma-70 region 2 AFK63_RS05975 PF02899 Phage integrase, N-terminal SAM-like domain AFK63_RS05980 PF00497 Bacterial extracellular solute-binding proteins, family 3 AFK63_RS05985 PF00291 Pyridoxal-phosphate dependent enzyme AFK63_RS05990 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS05995 PF00005 ABC transporter AFK63_RS06000 PF00196 Bacterial regulatory proteins, luxR family AFK63_RS06000 PF03472 Autoinducer binding domain AFK63_RS06005 PF10769 Protein of unknown function (DUF2594) AFK63_RS06010 PF00196 Bacterial regulatory proteins, luxR family AFK63_RS06010 PF00072 Response regulator receiver domain AFK63_RS06015 PF02151 UvrB/uvrC motif AFK63_RS06015 PF01541 GIY-YIG catalytic domain AFK63_RS06015 PF08459 UvrC Helix-hairpin-helix N-terminal AFK63_RS06020 PF01066 CDP-alcohol phosphatidyltransferase AFK63_RS06040 PF00583 Acetyltransferase (GNAT) family AFK63_RS06045 PF03222 Tryptophan/tyrosine permease family AFK63_RS06050 PF00210 Ferritin-like domain AFK63_RS06060 PF02203 Tar ligand binding domain homologue AFK63_RS06060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFK63_RS06060 PF00672 HAMP domain AFK63_RS06070 PF07690 Major Facilitator Superfamily AFK63_RS06075 PF10964 Protein of unknown function (DUF2766) AFK63_RS06090 PF03605 Anaerobic c4-dicarboxylate membrane transporter AFK63_RS06095 PF00210 Ferritin-like domain AFK63_RS06110 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AFK63_RS06115 PF00005 ABC transporter AFK63_RS06120 PF02653 Branched-chain amino acid transport system / permease component AFK63_RS06125 PF02358 Trehalose-phosphatase AFK63_RS06130 PF00982 Glycosyltransferase family 20 AFK63_RS06135 PF00582 Universal stress protein family AFK63_RS06140 PF05247 Flagellar transcriptional activator (FlhD) AFK63_RS06145 PF05280 Flagellar transcriptional activator (FlhC) AFK63_RS06150 PF01618 MotA/TolQ/ExbB proton channel family AFK63_RS06155 PF13677 Membrane MotB of proton-channel complex MotA/MotB AFK63_RS06155 PF00691 OmpA family AFK63_RS06160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS06160 PF02895 Signal transducing histidine kinase, homodimeric domain AFK63_RS06160 PF09078 CheY binding AFK63_RS06160 PF01584 CheW-like domain AFK63_RS06160 PF01627 Hpt domain AFK63_RS06165 PF01584 CheW-like domain AFK63_RS06195 PF02203 Tar ligand binding domain homologue AFK63_RS06195 PF00672 HAMP domain AFK63_RS06195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFK63_RS06205 PF01739 CheR methyltransferase, SAM binding domain AFK63_RS06205 PF03705 CheR methyltransferase, all-alpha domain AFK63_RS06210 PF00072 Response regulator receiver domain AFK63_RS06210 PF01339 CheB methylesterase AFK63_RS06215 PF00072 Response regulator receiver domain AFK63_RS06220 PF04344 Chemotaxis phosphatase, CheZ AFK63_RS06230 PF01966 HD domain AFK63_RS06230 PF13286 Phosphohydrolase-associated domain AFK63_RS06235 PF01312 FlhB HrpN YscU SpaS Family AFK63_RS06240 PF00771 FHIPEP family AFK63_RS06245 PF06366 Flagellar protein FlhE AFK63_RS06255 PF07470 Glycosyl Hydrolase Family 88 AFK63_RS06260 PF15977 Winged helix-turn-helix DNA binding AFK63_RS06265 PF00750 tRNA synthetases class I (R) AFK63_RS06265 PF05746 DALR anticodon binding domain AFK63_RS06265 PF03485 Arginyl tRNA synthetase N terminal domain AFK63_RS06270 PF06185 YecM protein AFK63_RS06280 PF13823 Alcohol dehydrogenase GroES-associated AFK63_RS06280 PF00107 Zinc-binding dehydrogenase AFK63_RS06280 PF08240 Alcohol dehydrogenase GroES-like domain AFK63_RS06285 PF00155 Aminotransferase class I and II AFK63_RS06290 PF03932 CutC family AFK63_RS06300 PF00012 Hsp70 protein AFK63_RS06310 PF04972 BON domain AFK63_RS06310 PF01476 LysM domain AFK63_RS06315 PF08003 Protein of unknown function (DUF1698) AFK63_RS06320 PF13649 Methyltransferase domain AFK63_RS06325 PF01124 MAPEG family AFK63_RS06330 PF01904 Protein of unknown function DUF72 AFK63_RS06335 PF00857 Isochorismatase family AFK63_RS06340 PF02938 GAD domain AFK63_RS06340 PF00152 tRNA synthetases class II (D, K and N) AFK63_RS06340 PF01336 OB-fold nucleic acid binding domain AFK63_RS06345 PF00293 NUDIX domain AFK63_RS06350 PF01709 Transcriptional regulator AFK63_RS06355 PF02075 Crossover junction endodeoxyribonuclease RuvC AFK63_RS06360 PF01330 RuvA N terminal domain AFK63_RS06360 PF07499 RuvA, C-terminal domain AFK63_RS06365 PF17864 RuvB AAA lid domain AFK63_RS06365 PF05491 RuvB C-terminal winged helix domain AFK63_RS06365 PF05496 Holliday junction DNA helicase RuvB P-loop domain AFK63_RS06370 PF00950 ABC 3 transport family AFK63_RS06375 PF00005 ABC transporter AFK63_RS06380 PF01297 Zinc-uptake complex component A periplasmic AFK63_RS06385 PF08525 Opacity-associated protein A N-terminal motif AFK63_RS06385 PF01476 LysM domain AFK63_RS06385 PF01551 Peptidase family M23 AFK63_RS06390 PF03279 Bacterial lipid A biosynthesis acyltransferase AFK63_RS06400 PF17761 DUF1016 N-terminal domain AFK63_RS06400 PF06250 YhcG PDDEXK nuclease domain AFK63_RS06405 PF04002 RadC-like JAB domain AFK63_RS06415 PF06067 Domain of unknown function (DUF932) AFK63_RS06420 PF02195 ParB-like nuclease domain AFK63_RS06430 PF05284 Protein of unknown function (DUF736) AFK63_RS06460 PF13614 AAA domain AFK63_RS06475 PF10502 Signal peptidase, peptidase S26 AFK63_RS06490 PF00440 Bacterial regulatory proteins, tetR family AFK63_RS06500 PF12838 4Fe-4S dicluster domain AFK63_RS06505 PF00440 Bacterial regulatory proteins, tetR family AFK63_RS06505 PF17754 MftR C-terminal domain AFK63_RS06515 PF00440 Bacterial regulatory proteins, tetR family AFK63_RS06515 PF17754 MftR C-terminal domain AFK63_RS06520 PF02321 Outer membrane efflux protein AFK63_RS06525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AFK63_RS06530 PF00873 AcrB/AcrD/AcrF family AFK63_RS06540 PF12706 Beta-lactamase superfamily domain AFK63_RS06550 PF00106 short chain dehydrogenase AFK63_RS06560 PF08240 Alcohol dehydrogenase GroES-like domain AFK63_RS06560 PF00107 Zinc-binding dehydrogenase AFK63_RS06570 PF00248 Aldo/keto reductase family AFK63_RS06585 PF03466 LysR substrate binding domain AFK63_RS06585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS06595 PF02534 Type IV secretory system Conjugative DNA transfer AFK63_RS06605 PF00437 Type II/IV secretion system protein AFK63_RS06610 PF04956 TrbC/VIRB2 family AFK63_RS06620 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AFK63_RS06635 PF04610 TrbL/VirB6 plasmid conjugal transfer protein AFK63_RS06645 PF03524 Conjugal transfer protein AFK63_RS06650 PF03743 Bacterial conjugation TrbI-like protein AFK63_RS06660 PF02887 Pyruvate kinase, alpha/beta domain AFK63_RS06660 PF00224 Pyruvate kinase, barrel domain AFK63_RS06665 PF01418 Helix-turn-helix domain, rpiR family AFK63_RS06665 PF01380 SIS domain AFK63_RS06670 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AFK63_RS06670 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AFK63_RS06675 PF00920 Dehydratase family AFK63_RS06680 PF01081 KDPG and KHG aldolase AFK63_RS06685 PF02222 ATP-grasp domain AFK63_RS06690 PF07130 YebG protein AFK63_RS06700 PF13995 YebF-like protein AFK63_RS06705 PF04391 Protein of unknown function (DUF533) AFK63_RS06710 PF00326 Prolyl oligopeptidase family AFK63_RS06710 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AFK63_RS06715 PF00929 Exonuclease AFK63_RS06720 PF06440 DNA polymerase III, theta subunit AFK63_RS06725 PF04234 CopC domain AFK63_RS06730 PF05425 Copper resistance protein D AFK63_RS06735 PF10709 Protein of unknown function (DUF2511) AFK63_RS06740 PF00149 Calcineurin-like phosphoesterase AFK63_RS06745 PF07358 Protein of unknown function (DUF1482) AFK63_RS06750 PF07351 Protein of unknown function (DUF1480) AFK63_RS06755 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF AFK63_RS06755 PF01189 16S rRNA methyltransferase RsmB/F AFK63_RS06755 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AFK63_RS06760 PF02470 MlaD protein AFK63_RS06765 PF04403 Paraquat-inducible protein A AFK63_RS06770 PF13185 GAF domain AFK63_RS06775 PF17516 ProQ C-terminal domain AFK63_RS06775 PF04352 ProQ/FINO family AFK63_RS06780 PF00595 PDZ domain AFK63_RS06780 PF03572 Peptidase family S41 AFK63_RS06780 PF11818 C-terminal domain of tail specific protease (DUF3340) AFK63_RS06780 PF17804 Tail specific protease N-terminal domain AFK63_RS06785 PF01435 Peptidase family M48 AFK63_RS06790 PF09339 IclR helix-turn-helix domain AFK63_RS06790 PF01614 Bacterial transcriptional regulator AFK63_RS06795 PF13996 YobH-like protein AFK63_RS06800 PF13998 MgrB protein AFK63_RS06805 PF13974 YebO-like protein AFK63_RS06810 PF12706 Beta-lactamase superfamily domain AFK63_RS06815 PF00313 'Cold-shock' DNA-binding domain AFK63_RS06820 PF13847 Methyltransferase domain AFK63_RS06825 PF02659 Putative manganese efflux pump AFK63_RS06830 PF06173 Protein of unknown function (DUF986) AFK63_RS06835 PF03613 PTS system mannose/fructose/sorbose family IID component AFK63_RS06840 PF03609 PTS system sorbose-specific iic component AFK63_RS06845 PF03610 PTS system fructose IIA component AFK63_RS06845 PF03830 PTS system sorbose subfamily IIB component AFK63_RS06850 PF03471 Transporter associated domain AFK63_RS06850 PF03741 Integral membrane protein TerC family AFK63_RS06855 PF00563 EAL domain AFK63_RS06855 PF12792 CSS motif domain associated with EAL AFK63_RS06860 PF03315 Serine dehydratase beta chain AFK63_RS06860 PF03313 Serine dehydratase alpha chain AFK63_RS06865 PF00293 NUDIX domain AFK63_RS06870 PF04715 Anthranilate synthase component I, N terminal region AFK63_RS06870 PF00425 chorismate binding enzyme AFK63_RS06875 PF03701 Uncharacterised protein family (UPF0181) AFK63_RS06880 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AFK63_RS06880 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AFK63_RS06885 PF01370 NAD dependent epimerase/dehydratase family AFK63_RS06905 PF04116 Fatty acid hydroxylase superfamily AFK63_RS06920 PF01042 Endoribonuclease L-PSP AFK63_RS06925 PF13307 Helicase C-terminal domain AFK63_RS06925 PF04851 Type III restriction enzyme, res subunit AFK63_RS06930 PF00814 Glycoprotease family AFK63_RS06935 PF03843 Outer membrane lipoprotein Slp family AFK63_RS06940 PF00501 AMP-binding enzyme AFK63_RS06940 PF13193 AMP-binding enzyme C-terminal domain AFK63_RS06945 PF00570 HRDC domain AFK63_RS06945 PF01612 3'-5' exonuclease AFK63_RS06950 PF03776 Septum formation topological specificity factor MinE AFK63_RS06955 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AFK63_RS06960 PF03775 Septum formation inhibitor MinC, C-terminal domain AFK63_RS06960 PF05209 Septum formation inhibitor MinC, N-terminal domain AFK63_RS06965 PF05166 YcgL domain AFK63_RS06970 PF01557 Fumarylacetoacetate (FAA) hydrolase family AFK63_RS06975 PF03692 Putative zinc- or iron-chelating domain AFK63_RS06985 PF02600 Disulfide bond formation protein DsbB AFK63_RS06990 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AFK63_RS06995 PF07840 FadR C-terminal domain AFK63_RS06995 PF00392 Bacterial regulatory proteins, gntR family AFK63_RS07000 PF04293 SpoVR like protein AFK63_RS07005 PF01266 FAD dependent oxidoreductase AFK63_RS07010 PF01168 Alanine racemase, N-terminal domain AFK63_RS07010 PF00842 Alanine racemase, C-terminal domain AFK63_RS07015 PF02080 TrkA-C domain AFK63_RS07015 PF03471 Transporter associated domain AFK63_RS07015 PF00999 Sodium/hydrogen exchanger family AFK63_RS07020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS07020 PF03466 LysR substrate binding domain AFK63_RS07025 PF00248 Aldo/keto reductase family AFK63_RS07035 PF02525 Flavodoxin-like fold AFK63_RS07040 PF07690 Major Facilitator Superfamily AFK63_RS07045 PF02311 AraC-like ligand binding domain AFK63_RS07045 PF12833 Helix-turn-helix domain AFK63_RS07065 PF17676 LD-carboxypeptidase C-terminal domain AFK63_RS07065 PF02016 LD-carboxypeptidase N-terminal domain AFK63_RS07070 PF01464 Transglycosylase SLT domain AFK63_RS07075 PF07317 Flagellar regulator YcgR AFK63_RS07075 PF07238 PilZ domain AFK63_RS07080 PF04226 Transglycosylase associated protein AFK63_RS07085 PF07715 TonB-dependent Receptor Plug Domain AFK63_RS07085 PF00593 TonB dependent receptor AFK63_RS07090 PF01204 Trehalase AFK63_RS07095 PF00356 Bacterial regulatory proteins, lacI family AFK63_RS07105 PF08402 TOBE domain AFK63_RS07105 PF00005 ABC transporter AFK63_RS07125 PF00392 Bacterial regulatory proteins, gntR family AFK63_RS07125 PF00155 Aminotransferase class I and II AFK63_RS07130 PF02627 Carboxymuconolactone decarboxylase family AFK63_RS07145 PF02525 Flavodoxin-like fold AFK63_RS07160 PF02810 SEC-C motif AFK63_RS07160 PF03695 Uncharacterised protein family (UPF0149) AFK63_RS07165 PF01926 50S ribosome-binding GTPase AFK63_RS07165 PF06071 Protein of unknown function (DUF933) AFK63_RS07170 PF01195 Peptidyl-tRNA hydrolase AFK63_RS07175 PF10762 Protein of unknown function (DUF2583) AFK63_RS07185 PF01740 STAS domain AFK63_RS07185 PF00916 Sulfate permease family AFK63_RS07190 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AFK63_RS07190 PF14572 Phosphoribosyl synthetase-associated domain AFK63_RS07195 PF00288 GHMP kinases N terminal domain AFK63_RS07195 PF08544 GHMP kinases C terminal AFK63_RS07200 PF03550 Outer membrane lipoprotein LolB AFK63_RS07205 PF01488 Shikimate / quinate 5-dehydrogenase AFK63_RS07205 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AFK63_RS07205 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AFK63_RS07210 PF03462 PCRF domain AFK63_RS07210 PF00472 RF-1 domain AFK63_RS07215 PF13847 Methyltransferase domain AFK63_RS07215 PF17827 PrmC N-terminal domain AFK63_RS07220 PF04247 Invasion gene expression up-regulator, SirB AFK63_RS07225 PF13369 Transglutaminase-like superfamily AFK63_RS07230 PF00793 DAHP synthetase I family AFK63_RS07235 PF01699 Sodium/calcium exchanger protein AFK63_RS07240 PF06150 ChaB AFK63_RS07245 PF04752 ChaC-like protein AFK63_RS07255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFK63_RS07255 PF00672 HAMP domain AFK63_RS07255 PF02203 Tar ligand binding domain homologue AFK63_RS07260 PF02635 DsrE/DsrF-like family AFK63_RS07265 PF08376 Nitrate and nitrite sensing AFK63_RS07265 PF03861 ANTAR domain AFK63_RS07275 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS07280 PF00005 ABC transporter AFK63_RS07285 PF18267 Rubredoxin NAD+ reductase C-terminal domain AFK63_RS07285 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AFK63_RS07285 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AFK63_RS07285 PF04324 BFD-like [2Fe-2S] binding domain AFK63_RS07285 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFK63_RS07285 PF13806 Rieske-like [2Fe-2S] domain AFK63_RS07290 PF04324 BFD-like [2Fe-2S] binding domain AFK63_RS07290 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AFK63_RS07290 PF01568 Molydopterin dinucleotide binding domain AFK63_RS07290 PF00384 Molybdopterin oxidoreductase AFK63_RS07295 PF01161 Phosphatidylethanolamine-binding protein AFK63_RS07300 PF11924 Inverse autotransporter, beta-domain AFK63_RS07305 PF00196 Bacterial regulatory proteins, luxR family AFK63_RS07305 PF00072 Response regulator receiver domain AFK63_RS07310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS07310 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AFK63_RS07310 PF07730 Histidine kinase AFK63_RS07310 PF00672 HAMP domain AFK63_RS07315 PF07690 Major Facilitator Superfamily AFK63_RS07320 PF14710 Respiratory nitrate reductase alpha N-terminal AFK63_RS07320 PF01568 Molydopterin dinucleotide binding domain AFK63_RS07320 PF00384 Molybdopterin oxidoreductase AFK63_RS07325 PF14711 Respiratory nitrate reductase beta C-terminal AFK63_RS07325 PF13247 4Fe-4S dicluster domain AFK63_RS07330 PF02613 Nitrate reductase delta subunit AFK63_RS07335 PF02665 Nitrate reductase gamma subunit AFK63_RS07340 PF08546 Ketopantoate reductase PanE/ApbA C terminal AFK63_RS07340 PF02558 Ketopantoate reductase PanE/ApbA AFK63_RS07350 PF00106 short chain dehydrogenase AFK63_RS07360 PF07690 Major Facilitator Superfamily AFK63_RS07375 PF01842 ACT domain AFK63_RS07375 PF00551 Formyl transferase AFK63_RS07380 PF02810 SEC-C motif AFK63_RS07385 PF00072 Response regulator receiver domain AFK63_RS07390 PF00483 Nucleotidyl transferase AFK63_RS07395 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AFK63_RS07395 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AFK63_RS07395 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AFK63_RS07400 PF01370 NAD dependent epimerase/dehydratase family AFK63_RS07405 PF00816 H-NS histone family AFK63_RS07410 PF00265 Thymidine kinase AFK63_RS07415 PF00465 Iron-containing alcohol dehydrogenase AFK63_RS07415 PF00171 Aldehyde dehydrogenase family AFK63_RS07420 PF01914 MarC family integral membrane protein AFK63_RS07425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AFK63_RS07430 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS07435 PF12911 N-terminal TM domain of oligopeptide transport permease C AFK63_RS07435 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS07440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AFK63_RS07440 PF00005 ABC transporter AFK63_RS07445 PF00005 ABC transporter AFK63_RS07445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AFK63_RS07450 PF00520 Ion transport protein AFK63_RS07450 PF00027 Cyclic nucleotide-binding domain AFK63_RS07455 PF04269 Protein of unknown function, DUF440 AFK63_RS07460 PF13396 Phospholipase_D-nuclease N-terminal AFK63_RS07460 PF13091 PLD-like domain AFK63_RS07470 PF03795 YCII-related domain AFK63_RS07475 PF03544 Gram-negative bacterial TonB protein C-terminal AFK63_RS07480 PF03061 Thioesterase superfamily AFK63_RS07485 PF00593 TonB dependent receptor AFK63_RS07485 PF07715 TonB-dependent Receptor Plug Domain AFK63_RS07490 PF04279 Intracellular septation protein A AFK63_RS07500 PF03692 Putative zinc- or iron-chelating domain AFK63_RS07505 PF03922 OmpW family AFK63_RS07515 PF00290 Tryptophan synthase alpha chain AFK63_RS07520 PF00291 Pyridoxal-phosphate dependent enzyme AFK63_RS07525 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AFK63_RS07525 PF00218 Indole-3-glycerol phosphate synthase AFK63_RS07530 PF02885 Glycosyl transferase family, helical bundle domain AFK63_RS07530 PF00117 Glutamine amidotransferase class-I AFK63_RS07530 PF00591 Glycosyl transferase family, a/b domain AFK63_RS07535 PF04715 Anthranilate synthase component I, N terminal region AFK63_RS07535 PF00425 chorismate binding enzyme AFK63_RS07540 PF02811 PHP domain AFK63_RS07545 PF01300 Telomere recombination AFK63_RS07550 PF01479 S4 domain AFK63_RS07550 PF00849 RNA pseudouridylate synthase AFK63_RS07555 PF12557 Cob(I)alamin adenosyltransferase N terminal AFK63_RS07555 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AFK63_RS07560 PF00106 short chain dehydrogenase AFK63_RS07565 PF08496 Peptidase family S49 N-terminal AFK63_RS07565 PF01343 Peptidase family S49 AFK63_RS07570 PF10692 Protein of unknown function (DUF2498) AFK63_RS07575 PF01396 Topoisomerase DNA binding C4 zinc finger AFK63_RS07575 PF01131 DNA topoisomerase AFK63_RS07575 PF08272 Topoisomerase I zinc-ribbon-like AFK63_RS07575 PF01751 Toprim domain AFK63_RS07580 PF03466 LysR substrate binding domain AFK63_RS07580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS07585 PF00330 Aconitase family (aconitate hydratase) AFK63_RS07585 PF00694 Aconitase C-terminal domain AFK63_RS07590 PF00925 GTP cyclohydrolase II AFK63_RS07595 PF01569 PAP2 superfamily AFK63_RS07600 PF06305 Lipopolysaccharide assembly protein A domain AFK63_RS07605 PF18073 Rubredoxin metal binding domain AFK63_RS07610 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AFK63_RS07615 PF01253 Translation initiation factor SUI1 AFK63_RS07620 PF05433 Glycine zipper 2TM domain AFK63_RS07625 PF08220 DeoR-like helix-turn-helix domain AFK63_RS07625 PF00455 DeoR C terminal sensor domain AFK63_RS07630 PF02901 Pyruvate formate lyase-like AFK63_RS07630 PF01228 Glycine radical AFK63_RS07635 PF04055 Radical SAM superfamily AFK63_RS07640 PF00923 Transaldolase/Fructose-6-phosphate aldolase AFK63_RS07650 PF00378 Enoyl-CoA hydratase/isomerase AFK63_RS07655 PF00563 EAL domain AFK63_RS07655 PF13426 PAS domain AFK63_RS07655 PF00990 Diguanylate cyclase, GGDEF domain AFK63_RS07660 PF00773 RNB domain AFK63_RS07660 PF17876 Cold shock domain AFK63_RS07660 PF08206 Ribonuclease B OB domain AFK63_RS07660 PF00575 S1 RNA binding domain AFK63_RS07675 PF00005 ABC transporter AFK63_RS07680 PF00005 ABC transporter AFK63_RS07680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AFK63_RS07685 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS07685 PF12911 N-terminal TM domain of oligopeptide transport permease C AFK63_RS07690 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS07695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AFK63_RS07700 PF00158 Sigma-54 interaction domain AFK63_RS07700 PF02954 Bacterial regulatory protein, Fis family AFK63_RS07705 PF04012 PspA/IM30 family AFK63_RS07710 PF06667 Phage shock protein B AFK63_RS07715 PF04024 PspC domain AFK63_RS07720 PF09584 Phage shock protein PspD (Phageshock_PspD) AFK63_RS07725 PF00128 Alpha amylase, catalytic domain AFK63_RS07730 PF01547 Bacterial extracellular solute-binding protein AFK63_RS07735 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS07740 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS07745 PF00107 Zinc-binding dehydrogenase AFK63_RS07750 PF01261 Xylose isomerase-like TIM barrel AFK63_RS07770 PF01381 Helix-turn-helix AFK63_RS07810 PF05866 Endodeoxyribonuclease RusA AFK63_RS07825 PF04971 Bacteriophage P21 holin S AFK63_RS07830 PF00959 Phage lysozyme AFK63_RS07850 PF03354 Phage Terminase AFK63_RS07890 PF04984 Phage tail sheath protein subtilisin-like domain AFK63_RS07890 PF17482 Phage tail sheath C-terminal domain AFK63_RS07930 PF04865 Baseplate J-like protein AFK63_RS07935 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) AFK63_RS07955 PF01022 Bacterial regulatory protein, arsR family AFK63_RS07960 PF02040 Arsenical pump membrane protein AFK63_RS07965 PF03960 ArsC family AFK63_RS07970 PF03358 NADPH-dependent FMN reductase AFK63_RS07990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS07990 PF03466 LysR substrate binding domain AFK63_RS07995 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AFK63_RS07995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFK63_RS08000 PF03632 Glycosyl hydrolase family 65 central catalytic domain AFK63_RS08000 PF03636 Glycosyl hydrolase family 65, N-terminal domain AFK63_RS08000 PF03633 Glycosyl hydrolase family 65, C-terminal domain AFK63_RS08005 PF13419 Haloacid dehalogenase-like hydrolase AFK63_RS08010 PF17912 MalK OB fold domain AFK63_RS08010 PF00005 ABC transporter AFK63_RS08010 PF03459 TOBE domain AFK63_RS08015 PF00583 Acetyltransferase (GNAT) family AFK63_RS08020 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AFK63_RS08020 PF00356 Bacterial regulatory proteins, lacI family AFK63_RS08025 PF04317 YcjX-like family, DUF463 AFK63_RS08030 PF05128 Domain of unknown function (DUF697) AFK63_RS08035 PF18024 Helix-turn-helix domain AFK63_RS08035 PF00158 Sigma-54 interaction domain AFK63_RS08040 PF08534 Redoxin AFK63_RS08045 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AFK63_RS08045 PF13378 Enolase C-terminal domain-like AFK63_RS08050 PF00246 Zinc carboxypeptidase AFK63_RS08055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AFK63_RS08070 PF07715 TonB-dependent Receptor Plug Domain AFK63_RS08070 PF00593 TonB dependent receptor AFK63_RS08075 PF00756 Putative esterase AFK63_RS08075 PF11806 Domain of unknown function (DUF3327) AFK63_RS08090 PF10685 Stress-induced bacterial acidophilic repeat motif AFK63_RS08095 PF00563 EAL domain AFK63_RS08095 PF00990 Diguanylate cyclase, GGDEF domain AFK63_RS08095 PF03707 Bacterial signalling protein N terminal repeat AFK63_RS08095 PF13188 PAS domain AFK63_RS08115 PF01544 CorA-like Mg2+ transporter protein AFK63_RS08120 PF01171 PP-loop family AFK63_RS08140 PF00158 Sigma-54 interaction domain AFK63_RS08140 PF02954 Bacterial regulatory protein, Fis family AFK63_RS08140 PF01590 GAF domain AFK63_RS08145 PF00171 Aldehyde dehydrogenase family AFK63_RS08150 PF08240 Alcohol dehydrogenase GroES-like domain AFK63_RS08150 PF00107 Zinc-binding dehydrogenase AFK63_RS08160 PF10371 Domain of unknown function AFK63_RS08160 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AFK63_RS08160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AFK63_RS08160 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AFK63_RS08160 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AFK63_RS08165 PF03891 Domain of unknown function (DUF333) AFK63_RS08170 PF03724 META domain AFK63_RS08175 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AFK63_RS08175 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AFK63_RS08180 PF11739 Dicarboxylate transport AFK63_RS08185 PF13617 YnbE-like lipoprotein AFK63_RS08190 PF07027 Protein of unknown function (DUF1318) AFK63_RS08200 PF02525 Flavodoxin-like fold AFK63_RS08205 PF00271 Helicase conserved C-terminal domain AFK63_RS08205 PF04408 Helicase associated domain (HA2) AFK63_RS08205 PF11898 Domain of unknown function (DUF3418) AFK63_RS08205 PF00270 DEAD/DEAH box helicase AFK63_RS08205 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AFK63_RS08210 PF01596 O-methyltransferase AFK63_RS08215 PF02321 Outer membrane efflux protein AFK63_RS08220 PF13533 Biotin-lipoyl like AFK63_RS08240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AFK63_RS08245 PF00083 Sugar (and other) transporter AFK63_RS08245 PF07690 Major Facilitator Superfamily AFK63_RS08250 PF02698 DUF218 domain AFK63_RS08255 PF00171 Aldehyde dehydrogenase family AFK63_RS08260 PF13472 GDSL-like Lipase/Acylhydrolase family AFK63_RS08260 PF07859 alpha/beta hydrolase fold AFK63_RS08265 PF01292 Prokaryotic cytochrome b561 AFK63_RS08270 PF00083 Sugar (and other) transporter AFK63_RS08270 PF08946 Osmosensory transporter coiled coil AFK63_RS08290 PF02583 Metal-sensitive transcriptional repressor AFK63_RS08295 PF00107 Zinc-binding dehydrogenase AFK63_RS08295 PF08240 Alcohol dehydrogenase GroES-like domain AFK63_RS08300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFK63_RS08300 PF02203 Tar ligand binding domain homologue AFK63_RS08300 PF00672 HAMP domain AFK63_RS08305 PF05974 Domain of unknown function (DUF892) AFK63_RS08310 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AFK63_RS08315 PF03466 LysR substrate binding domain AFK63_RS08315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS08320 PF07063 Domain of unknown function (DUF1338) AFK63_RS08325 PF00135 Carboxylesterase family AFK63_RS08330 PF04349 Periplasmic glucan biosynthesis protein, MdoG AFK63_RS08335 PF13302 Acetyltransferase (GNAT) domain AFK63_RS08340 PF18836 Beta solenoid repeat from YDCK AFK63_RS08345 PF03848 Tellurite resistance protein TehB AFK63_RS08350 PF11769 Protein of unknown function (DUF3313) AFK63_RS08355 PF03594 Benzoate membrane transport protein AFK63_RS08360 PF01381 Helix-turn-helix AFK63_RS08360 PF07883 Cupin domain AFK63_RS08365 PF12392 Collagenase AFK63_RS08365 PF01136 Peptidase family U32 AFK63_RS08370 PF00717 Peptidase S24-like AFK63_RS08375 PF00817 impB/mucB/samB family AFK63_RS08375 PF11799 impB/mucB/samB family C-terminal domain AFK63_RS08375 PF13438 Domain of unknown function (DUF4113) AFK63_RS08390 PF00893 Small Multidrug Resistance protein AFK63_RS08395 PF00893 Small Multidrug Resistance protein AFK63_RS08400 PF00089 Trypsin AFK63_RS08405 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AFK63_RS08410 PF07690 Major Facilitator Superfamily AFK63_RS08415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS08415 PF03466 LysR substrate binding domain AFK63_RS08420 PF00480 ROK family AFK63_RS08430 PF00571 CBS domain AFK63_RS08430 PF00005 ABC transporter AFK63_RS08435 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS08440 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AFK63_RS08445 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS08450 PF06942 GlpM protein AFK63_RS08455 PF02613 Nitrate reductase delta subunit AFK63_RS08460 PF04976 DMSO reductase anchor subunit (DmsC) AFK63_RS08465 PF13247 4Fe-4S dicluster domain AFK63_RS08465 PF12800 4Fe-4S binding domain AFK63_RS08470 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AFK63_RS08470 PF00384 Molybdopterin oxidoreductase AFK63_RS08470 PF01568 Molydopterin dinucleotide binding domain AFK63_RS08475 PF06649 Protein of unknown function (DUF1161) AFK63_RS08480 PF06788 Uncharacterised protein family (UPF0257) AFK63_RS08485 PF13302 Acetyltransferase (GNAT) domain AFK63_RS08490 PF06932 Protein of unknown function (DUF1283) AFK63_RS08495 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AFK63_RS08500 PF13378 Enolase C-terminal domain-like AFK63_RS08500 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AFK63_RS08505 PF07690 Major Facilitator Superfamily AFK63_RS08510 PF01232 Mannitol dehydrogenase Rossmann domain AFK63_RS08510 PF08125 Mannitol dehydrogenase C-terminal domain AFK63_RS08515 PF14001 YdfZ protein AFK63_RS08525 PF00392 Bacterial regulatory proteins, gntR family AFK63_RS08525 PF07729 FCD domain AFK63_RS08530 PF00106 short chain dehydrogenase AFK63_RS08535 PF01432 Peptidase family M3 AFK63_RS08545 PF01062 Bestrophin, RFP-TM, chloride channel AFK63_RS08550 PF10685 Stress-induced bacterial acidophilic repeat motif AFK63_RS08560 PF01717 Cobalamin-independent synthase, Catalytic domain AFK63_RS08565 PF01425 Amidase AFK63_RS08570 PF02785 Biotin carboxylase C-terminal domain AFK63_RS08570 PF00289 Biotin carboxylase, N-terminal domain AFK63_RS08570 PF00364 Biotin-requiring enzyme AFK63_RS08570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AFK63_RS08570 PF02785 Biotin carboxylase C-terminal domain AFK63_RS08570 PF00289 Biotin carboxylase, N-terminal domain AFK63_RS08570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AFK63_RS08570 PF00364 Biotin-requiring enzyme AFK63_RS08575 PF00392 Bacterial regulatory proteins, gntR family AFK63_RS08575 PF07729 FCD domain AFK63_RS08580 PF13458 Periplasmic binding protein AFK63_RS08585 PF02653 Branched-chain amino acid transport system / permease component AFK63_RS08590 PF02653 Branched-chain amino acid transport system / permease component AFK63_RS08595 PF12399 Branched-chain amino acid ATP-binding cassette transporter AFK63_RS08595 PF00005 ABC transporter AFK63_RS08600 PF00005 ABC transporter AFK63_RS08605 PF07690 Major Facilitator Superfamily AFK63_RS08610 PF00892 EamA-like transporter family AFK63_RS08615 PF13999 MarB protein AFK63_RS08620 PF12833 Helix-turn-helix domain AFK63_RS08625 PF01047 MarR family AFK63_RS08630 PF07690 Major Facilitator Superfamily AFK63_RS08635 PF02567 Phenazine biosynthesis-like protein AFK63_RS08640 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AFK63_RS08640 PF00056 lactate/malate dehydrogenase, NAD binding domain AFK63_RS08645 PF00583 Acetyltransferase (GNAT) family AFK63_RS08650 PF03466 LysR substrate binding domain AFK63_RS08650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS08655 PF00171 Aldehyde dehydrogenase family AFK63_RS08660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFK63_RS08660 PF17200 Single Cache domain 2 AFK63_RS08660 PF00672 HAMP domain AFK63_RS08665 PF04960 Glutaminase AFK63_RS08670 PF13811 Domain of unknown function (DUF4186) AFK63_RS08675 PF00990 Diguanylate cyclase, GGDEF domain AFK63_RS08680 PF03707 Bacterial signalling protein N terminal repeat AFK63_RS08680 PF00563 EAL domain AFK63_RS08680 PF00990 Diguanylate cyclase, GGDEF domain AFK63_RS08685 PF08448 PAS fold AFK63_RS08685 PF13426 PAS domain AFK63_RS08685 PF00563 EAL domain AFK63_RS08685 PF00990 Diguanylate cyclase, GGDEF domain AFK63_RS08685 PF08447 PAS fold AFK63_RS08685 PF05231 MASE1 AFK63_RS08695 PF01232 Mannitol dehydrogenase Rossmann domain AFK63_RS08695 PF08125 Mannitol dehydrogenase C-terminal domain AFK63_RS08700 PF03797 Autotransporter beta-domain AFK63_RS08700 PF00657 GDSL-like Lipase/Acylhydrolase AFK63_RS08705 PF01204 Trehalase AFK63_RS08710 PF16355 Domain of unknown function (DUF4982) AFK63_RS08710 PF00703 Glycosyl hydrolases family 2 AFK63_RS08710 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AFK63_RS08710 PF02837 Glycosyl hydrolases family 2, sugar binding domain AFK63_RS08715 PF00672 HAMP domain AFK63_RS08715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS08715 PF00512 His Kinase A (phospho-acceptor) domain AFK63_RS08715 PF01627 Hpt domain AFK63_RS08715 PF00072 Response regulator receiver domain AFK63_RS08715 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AFK63_RS08755 PF00072 Response regulator receiver domain AFK63_RS08755 PF00990 Diguanylate cyclase, GGDEF domain AFK63_RS08780 PF04229 GrpB protein AFK63_RS08780 PF13673 Acetyltransferase (GNAT) domain AFK63_RS08790 PF12697 Alpha/beta hydrolase family AFK63_RS08795 PF00376 MerR family regulatory protein AFK63_RS08795 PF09278 MerR, DNA binding AFK63_RS08800 PF00877 NlpC/P60 family AFK63_RS08825 PF07995 Glucose / Sorbosone dehydrogenase AFK63_RS08835 PF00563 EAL domain AFK63_RS08835 PF08668 HDOD domain AFK63_RS08850 PF03851 UV-endonuclease UvdE AFK63_RS08860 PF05593 RHS Repeat AFK63_RS08860 PF03527 RHS protein AFK63_RS08875 PF04717 Type VI secretion system, phage-baseplate injector AFK63_RS08875 PF06715 Gp5 C-terminal repeat (3 copies) AFK63_RS08880 PF12833 Helix-turn-helix domain AFK63_RS08880 PF06719 AraC-type transcriptional regulator N-terminus AFK63_RS08885 PF00106 short chain dehydrogenase AFK63_RS08890 PF00561 alpha/beta hydrolase fold AFK63_RS08905 PF01613 Flavin reductase like domain AFK63_RS08920 PF08240 Alcohol dehydrogenase GroES-like domain AFK63_RS08920 PF00107 Zinc-binding dehydrogenase AFK63_RS08930 PF12833 Helix-turn-helix domain AFK63_RS08935 PF00797 N-acetyltransferase AFK63_RS08940 PF05974 Domain of unknown function (DUF892) AFK63_RS08945 PF05067 Manganese containing catalase AFK63_RS08950 PF01361 Tautomerase enzyme AFK63_RS08955 PF00881 Nitroreductase family AFK63_RS08960 PF00144 Beta-lactamase AFK63_RS08965 PF00324 Amino acid permease AFK63_RS08980 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AFK63_RS08985 PF00005 ABC transporter AFK63_RS08990 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS09000 PF00593 TonB dependent receptor AFK63_RS09000 PF07715 TonB-dependent Receptor Plug Domain AFK63_RS09005 PF16657 Maltogenic Amylase, C-terminal domain AFK63_RS09005 PF00128 Alpha amylase, catalytic domain AFK63_RS09010 PF00106 short chain dehydrogenase AFK63_RS09015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFK63_RS09015 PF00672 HAMP domain AFK63_RS09015 PF02203 Tar ligand binding domain homologue AFK63_RS09025 PF00392 Bacterial regulatory proteins, gntR family AFK63_RS09025 PF07729 FCD domain AFK63_RS09030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AFK63_RS09035 PF12911 N-terminal TM domain of oligopeptide transport permease C AFK63_RS09035 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS09040 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS09050 PF02423 Ornithine cyclodeaminase/mu-crystallin family AFK63_RS09055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AFK63_RS09055 PF00005 ABC transporter AFK63_RS09060 PF16884 N-terminal domain of oxidoreductase AFK63_RS09060 PF00107 Zinc-binding dehydrogenase AFK63_RS09065 PF08671 Anti-repressor SinI AFK63_RS09065 PF01381 Helix-turn-helix AFK63_RS09070 PF00583 Acetyltransferase (GNAT) family AFK63_RS09075 PF04657 Putative inner membrane exporter, YdcZ AFK63_RS09080 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AFK63_RS09080 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AFK63_RS09085 PF10735 Protein of unknown function (DUF2526) AFK63_RS09090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AFK63_RS09110 PF01095 Pectinesterase AFK63_RS09125 PF00672 HAMP domain AFK63_RS09125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFK63_RS09125 PF02203 Tar ligand binding domain homologue AFK63_RS09140 PF04976 DMSO reductase anchor subunit (DmsC) AFK63_RS09145 PF12800 4Fe-4S binding domain AFK63_RS09145 PF13247 4Fe-4S dicluster domain AFK63_RS09150 PF01568 Molydopterin dinucleotide binding domain AFK63_RS09150 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AFK63_RS09150 PF00384 Molybdopterin oxidoreductase AFK63_RS09155 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AFK63_RS09155 PF00034 Cytochrome c AFK63_RS09190 PF00171 Aldehyde dehydrogenase family AFK63_RS09195 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS09200 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS09205 PF00005 ABC transporter AFK63_RS09205 PF08402 TOBE domain AFK63_RS09210 PF13416 Bacterial extracellular solute-binding protein AFK63_RS09215 PF00155 Aminotransferase class I and II AFK63_RS09215 PF00392 Bacterial regulatory proteins, gntR family AFK63_RS09220 PF01654 Cytochrome bd terminal oxidase subunit I AFK63_RS09225 PF02322 Cytochrome bd terminal oxidase subunit II AFK63_RS09235 PF00893 Small Multidrug Resistance protein AFK63_RS09245 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AFK63_RS09255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AFK63_RS09260 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS09265 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS09265 PF12911 N-terminal TM domain of oligopeptide transport permease C AFK63_RS09270 PF00005 ABC transporter AFK63_RS09270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AFK63_RS09275 PF00296 Luciferase-like monooxygenase AFK63_RS09290 PF01713 Smr domain AFK63_RS09295 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AFK63_RS09295 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AFK63_RS09300 PF00027 Cyclic nucleotide-binding domain AFK63_RS09300 PF00325 Bacterial regulatory proteins, crp family AFK63_RS09305 PF00582 Universal stress protein family AFK63_RS09310 PF02233 NAD(P) transhydrogenase beta subunit AFK63_RS09315 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AFK63_RS09315 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AFK63_RS09315 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AFK63_RS09320 PF07338 Protein of unknown function (DUF1471) AFK63_RS09325 PF13520 Amino acid permease AFK63_RS09335 PF00072 Response regulator receiver domain AFK63_RS09335 PF00486 Transcriptional regulatory protein, C terminal AFK63_RS09345 PF03466 LysR substrate binding domain AFK63_RS09345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS09350 PF00512 His Kinase A (phospho-acceptor) domain AFK63_RS09350 PF00672 HAMP domain AFK63_RS09350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS09355 PF05472 DNA replication terminus site-binding protein (Ter protein) AFK63_RS09360 PF10415 Fumarase C C-terminus AFK63_RS09360 PF00206 Lyase AFK63_RS09365 PF05681 Fumarate hydratase (Fumerase) AFK63_RS09365 PF05683 Fumarase C-terminus AFK63_RS09370 PF01238 Phosphomannose isomerase type I AFK63_RS09375 PF06097 Bacterial protein of unknown function (DUF945) AFK63_RS09380 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AFK63_RS09380 PF00356 Bacterial regulatory proteins, lacI family AFK63_RS09385 PF02378 Phosphotransferase system, EIIC AFK63_RS09385 PF00367 phosphotransferase system, EIIB AFK63_RS09390 PF00155 Aminotransferase class I and II AFK63_RS09395 PF00962 Adenosine/AMP deaminase AFK63_RS09400 PF13593 SBF-like CPA transporter family (DUF4137) AFK63_RS09405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFK63_RS09405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AFK63_RS09410 PF05321 Haemolysin expression modulating protein AFK63_RS09415 PF10754 Protein of unknown function (DUF2569) AFK63_RS09420 PF02508 Rnf-Nqr subunit, membrane protein AFK63_RS09425 PF04060 Putative Fe-S cluster AFK63_RS09430 PF10531 SLBB domain AFK63_RS09430 PF13375 RnfC Barrel sandwich hybrid domain AFK63_RS09430 PF13237 4Fe-4S dicluster domain AFK63_RS09430 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AFK63_RS09435 PF03116 NQR2, RnfD, RnfE family AFK63_RS09440 PF04205 FMN-binding domain AFK63_RS09445 PF02508 Rnf-Nqr subunit, membrane protein AFK63_RS09450 PF10576 Iron-sulfur binding domain of endonuclease III AFK63_RS09450 PF00730 HhH-GPD superfamily base excision DNA repair protein AFK63_RS09450 PF00633 Helix-hairpin-helix motif AFK63_RS09455 PF00854 POT family AFK63_RS09460 PF02798 Glutathione S-transferase, N-terminal domain AFK63_RS09460 PF00043 Glutathione S-transferase, C-terminal domain AFK63_RS09465 PF08543 Phosphomethylpyrimidine kinase AFK63_RS09470 PF00579 tRNA synthetases class I (W and Y) AFK63_RS09470 PF01479 S4 domain AFK63_RS09475 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AFK63_RS09475 PF01243 Pyridoxamine 5'-phosphate oxidase AFK63_RS09480 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme AFK63_RS09485 PF03702 Anhydro-N-acetylmuramic acid kinase AFK63_RS09490 PF05433 Glycine zipper 2TM domain AFK63_RS09495 PF01047 MarR family AFK63_RS09500 PF07869 Protein of unknown function (DUF1656) AFK63_RS09505 PF00529 HlyD membrane-fusion protein of T1SS AFK63_RS09505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AFK63_RS09510 PF04632 Fusaric acid resistance protein family AFK63_RS09515 PF00080 Copper/zinc superoxide dismutase (SODC) AFK63_RS09520 PF00248 Aldo/keto reductase family AFK63_RS09525 PF06945 Protein of unknown function (DUF1289) AFK63_RS09530 PF08019 Phosphoethanolamine transferase EptA/EptB AFK63_RS09530 PF00884 Sulfatase AFK63_RS09535 PF16925 Tetracyclin repressor-like, C-terminal domain AFK63_RS09535 PF00440 Bacterial regulatory proteins, tetR family AFK63_RS09540 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AFK63_RS09545 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AFK63_RS09550 PF00929 Exonuclease AFK63_RS09555 PF00462 Glutaredoxin AFK63_RS09560 PF00877 NlpC/P60 family AFK63_RS09565 PF07690 Major Facilitator Superfamily AFK63_RS09570 PF00356 Bacterial regulatory proteins, lacI family AFK63_RS09575 PF03466 LysR substrate binding domain AFK63_RS09575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS09580 PF07690 Major Facilitator Superfamily AFK63_RS09590 PF02378 Phosphotransferase system, EIIC AFK63_RS09595 PF00232 Glycosyl hydrolase family 1 AFK63_RS09600 PF00356 Bacterial regulatory proteins, lacI family AFK63_RS09605 PF00677 Lumazine binding domain AFK63_RS09610 PF01554 MatE AFK63_RS09635 PF12706 Beta-lactamase superfamily domain AFK63_RS09640 PF01965 DJ-1/PfpI family AFK63_RS09660 PF01638 HxlR-like helix-turn-helix AFK63_RS09670 PF02028 BCCT, betaine/carnitine/choline family transporter AFK63_RS09675 PF13977 BetI-type transcriptional repressor, C-terminal AFK63_RS09675 PF00440 Bacterial regulatory proteins, tetR family AFK63_RS09680 PF00171 Aldehyde dehydrogenase family AFK63_RS09685 PF00732 GMC oxidoreductase AFK63_RS09685 PF05199 GMC oxidoreductase AFK63_RS09690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS09690 PF03466 LysR substrate binding domain AFK63_RS09695 PF00753 Metallo-beta-lactamase superfamily AFK63_RS09695 PF16123 Hydroxyacylglutathione hydrolase C-terminus AFK63_RS09715 PF07690 Major Facilitator Superfamily AFK63_RS09720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS09720 PF03466 LysR substrate binding domain AFK63_RS09725 PF01568 Molydopterin dinucleotide binding domain AFK63_RS09725 PF00384 Molybdopterin oxidoreductase AFK63_RS09725 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AFK63_RS09730 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AFK63_RS09730 PF00384 Molybdopterin oxidoreductase AFK63_RS09730 PF01568 Molydopterin dinucleotide binding domain AFK63_RS09735 PF03824 High-affinity nickel-transport protein AFK63_RS09740 PF07503 HypF finger AFK63_RS09740 PF01300 Telomere recombination AFK63_RS09740 PF17788 HypF Kae1-like domain AFK63_RS09740 PF00708 Acylphosphatase AFK63_RS09745 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AFK63_RS09745 PF00384 Molybdopterin oxidoreductase AFK63_RS09745 PF01568 Molydopterin dinucleotide binding domain AFK63_RS09750 PF13247 4Fe-4S dicluster domain AFK63_RS09750 PF12800 4Fe-4S binding domain AFK63_RS09755 PF08971 Glycogen synthesis protein AFK63_RS09760 PF01750 Hydrogenase maturation protease AFK63_RS09765 PF07450 Formate hydrogenlyase maturation protein HycH AFK63_RS09770 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AFK63_RS09775 PF12838 4Fe-4S dicluster domain AFK63_RS09780 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AFK63_RS09780 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AFK63_RS09780 PF00374 Nickel-dependent hydrogenase AFK63_RS09785 PF00146 NADH dehydrogenase AFK63_RS09790 PF00361 Proton-conducting membrane transporter AFK63_RS09795 PF13247 4Fe-4S dicluster domain AFK63_RS09800 PF11046 Transcriptional repressor of hyc and hyp operons AFK63_RS09805 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AFK63_RS09810 PF02492 CobW/HypB/UreG, nucleotide-binding domain AFK63_RS09815 PF01455 HupF/HypC family AFK63_RS09820 PF01924 Hydrogenase formation hypA family AFK63_RS09825 PF02769 AIR synthase related protein, C-terminal domain AFK63_RS09825 PF00586 AIR synthase related protein, N-terminal domain AFK63_RS09830 PF02954 Bacterial regulatory protein, Fis family AFK63_RS09830 PF01590 GAF domain AFK63_RS09830 PF00158 Sigma-54 interaction domain AFK63_RS09835 PF00324 Amino acid permease AFK63_RS09840 PF00120 Glutamine synthetase, catalytic domain AFK63_RS09845 PF07722 Peptidase C26 AFK63_RS09850 PF01381 Helix-turn-helix AFK63_RS09850 PF07883 Cupin domain AFK63_RS09855 PF00171 Aldehyde dehydrogenase family AFK63_RS09860 PF01266 FAD dependent oxidoreductase AFK63_RS09865 PF16168 Adhesin of bacterial autotransporter system, probable stalk AFK63_RS09865 PF13018 Extended Signal Peptide of Type V secretion system AFK63_RS09865 PF13018 Extended Signal Peptide of Type V secretion system AFK63_RS09865 PF03797 Autotransporter beta-domain AFK63_RS09865 PF03797 Autotransporter beta-domain AFK63_RS09865 PF16168 Adhesin of bacterial autotransporter system, probable stalk AFK63_RS09870 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AFK63_RS09875 PF02887 Pyruvate kinase, alpha/beta domain AFK63_RS09875 PF00224 Pyruvate kinase, barrel domain AFK63_RS09880 PF04728 Lipoprotein leucine-zipper AFK63_RS09885 PF03734 L,D-transpeptidase catalytic domain AFK63_RS09885 PF01476 LysM domain AFK63_RS09885 PF17969 L,D-transpeptidase C-terminal domain AFK63_RS09890 PF02657 Fe-S metabolism associated domain AFK63_RS09895 PF00266 Aminotransferase class-V AFK63_RS09900 PF01458 Uncharacterized protein family (UPF0051) AFK63_RS09905 PF00005 ABC transporter AFK63_RS09910 PF01458 Uncharacterized protein family (UPF0051) AFK63_RS09915 PF01521 Iron-sulphur cluster biosynthesis AFK63_RS09920 PF03061 Thioesterase superfamily AFK63_RS09925 PF13183 4Fe-4S dicluster domain AFK63_RS09925 PF01565 FAD binding domain AFK63_RS09925 PF02913 FAD linked oxidases, C-terminal domain AFK63_RS09930 PF01594 AI-2E family transporter AFK63_RS09935 PF14310 Fibronectin type III-like domain AFK63_RS09935 PF00933 Glycosyl hydrolase family 3 N terminal domain AFK63_RS09935 PF01915 Glycosyl hydrolase family 3 C-terminal domain AFK63_RS09945 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AFK63_RS09945 PF02896 PEP-utilising enzyme, TIM barrel domain AFK63_RS09945 PF00391 PEP-utilising enzyme, mobile domain AFK63_RS09950 PF03618 Kinase/pyrophosphorylase AFK63_RS09955 PF00793 DAHP synthetase I family AFK63_RS09960 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AFK63_RS09965 PF00563 EAL domain AFK63_RS09970 PF11975 Family 4 glycosyl hydrolase C-terminal domain AFK63_RS09970 PF02056 Family 4 glycosyl hydrolase AFK63_RS09975 PF00877 NlpC/P60 family AFK63_RS09980 PF00005 ABC transporter AFK63_RS09985 PF00255 Glutathione peroxidase AFK63_RS09990 PF01032 FecCD transport family AFK63_RS09995 PF00216 Bacterial DNA-binding protein AFK63_RS10000 PF03483 B3/4 domain AFK63_RS10000 PF03147 Ferredoxin-fold anticodon binding domain AFK63_RS10000 PF01588 Putative tRNA binding domain AFK63_RS10000 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AFK63_RS10000 PF03484 tRNA synthetase B5 domain AFK63_RS10005 PF01409 tRNA synthetases class II core domain (F) AFK63_RS10005 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AFK63_RS10010 PF00453 Ribosomal protein L20 AFK63_RS10015 PF01632 Ribosomal protein L35 AFK63_RS10020 PF05198 Translation initiation factor IF-3, N-terminal domain AFK63_RS10020 PF00707 Translation initiation factor IF-3, C-terminal domain AFK63_RS10025 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AFK63_RS10025 PF02824 TGS domain AFK63_RS10025 PF03129 Anticodon binding domain AFK63_RS10025 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AFK63_RS10030 PF00583 Acetyltransferase (GNAT) family AFK63_RS10035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS10035 PF03466 LysR substrate binding domain AFK63_RS10045 PF03974 Ecotin AFK63_RS10055 PF05067 Manganese containing catalase AFK63_RS10060 PF08946 Osmosensory transporter coiled coil AFK63_RS10060 PF00083 Sugar (and other) transporter AFK63_RS10070 PF04338 Protein of unknown function, DUF481 AFK63_RS10075 PF00294 pfkB family carbohydrate kinase AFK63_RS10080 PF11080 Endoribonuclease GhoS AFK63_RS10085 PF03881 Fructosamine kinase AFK63_RS10090 PF14002 YniB-like protein AFK63_RS10095 PF13419 Haloacid dehalogenase-like hydrolase AFK63_RS10105 PF04307 LexA-binding, inner membrane-associated putative hydrolase AFK63_RS10110 PF00375 Sodium:dicarboxylate symporter family AFK63_RS10115 PF10729 Cell division activator CedA AFK63_RS10120 PF00199 Catalase AFK63_RS10120 PF06628 Catalase-related immune-responsive AFK63_RS10120 PF18011 C-terminal domain found in long catalases AFK63_RS10125 PF04355 SmpA / OmlA family AFK63_RS10130 PF02540 NAD synthase AFK63_RS10135 PF00892 EamA-like transporter family AFK63_RS10145 PF05962 HutD AFK63_RS10150 PF07813 LTXXQ motif family protein AFK63_RS10155 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AFK63_RS10160 PF04996 Succinylarginine dihydrolase AFK63_RS10165 PF00171 Aldehyde dehydrogenase family AFK63_RS10170 PF04958 Arginine N-succinyltransferase beta subunit AFK63_RS10175 PF00202 Aminotransferase class-III AFK63_RS10180 PF03372 Endonuclease/Exonuclease/phosphatase family AFK63_RS10185 PF00293 NUDIX domain AFK63_RS10190 PF07383 Protein of unknown function (DUF1496) AFK63_RS10195 PF01131 DNA topoisomerase AFK63_RS10195 PF01751 Toprim domain AFK63_RS10200 PF02769 AIR synthase related protein, C-terminal domain AFK63_RS10200 PF00586 AIR synthase related protein, N-terminal domain AFK63_RS10205 PF00881 Nitroreductase family AFK63_RS10210 PF01343 Peptidase family S49 AFK63_RS10215 PF17763 Glutaminase/Asparaginase C-terminal domain AFK63_RS10215 PF00710 Asparaginase, N-terminal AFK63_RS10220 PF00857 Isochorismatase family AFK63_RS10225 PF07023 Protein of unknown function (DUF1315) AFK63_RS10230 PF01641 SelR domain AFK63_RS10235 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AFK63_RS10235 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AFK63_RS10240 PF01263 Aldose 1-epimerase AFK63_RS10245 PF06629 MltA-interacting protein MipA AFK63_RS10250 PF08298 PrkA AAA domain AFK63_RS10250 PF06798 PrkA serine protein kinase C-terminal domain AFK63_RS10255 PF04285 Protein of unknown function (DUF444) AFK63_RS10260 PF12792 CSS motif domain associated with EAL AFK63_RS10260 PF00563 EAL domain AFK63_RS10265 PF04073 Aminoacyl-tRNA editing domain AFK63_RS10270 PF04284 Protein of unknown function (DUF441) AFK63_RS10275 PF07690 Major Facilitator Superfamily AFK63_RS10280 PF00117 Glutamine amidotransferase class-I AFK63_RS10280 PF06418 CTP synthase N-terminus AFK63_RS10285 PF04343 Protein of unknown function, DUF488 AFK63_RS10295 PF04393 Protein of unknown function (DUF535) AFK63_RS10300 PF01584 CheW-like domain AFK63_RS10300 PF00072 Response regulator receiver domain AFK63_RS10310 PF00313 'Cold-shock' DNA-binding domain AFK63_RS10315 PF02677 Epoxyqueuosine reductase QueH AFK63_RS10340 PF03466 LysR substrate binding domain AFK63_RS10340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS10350 PF13438 Domain of unknown function (DUF4113) AFK63_RS10350 PF11798 IMS family HHH motif AFK63_RS10350 PF11799 impB/mucB/samB family C-terminal domain AFK63_RS10350 PF00817 impB/mucB/samB family AFK63_RS10360 PF03471 Transporter associated domain AFK63_RS10360 PF03741 Integral membrane protein TerC family AFK63_RS10365 PF11799 impB/mucB/samB family C-terminal domain AFK63_RS10365 PF11798 IMS family HHH motif AFK63_RS10365 PF13438 Domain of unknown function (DUF4113) AFK63_RS10365 PF00817 impB/mucB/samB family AFK63_RS10380 PF00394 Multicopper oxidase AFK63_RS10380 PF07731 Multicopper oxidase AFK63_RS10380 PF07732 Multicopper oxidase AFK63_RS10385 PF05275 Copper resistance protein B precursor (CopB) AFK63_RS10390 PF04234 CopC domain AFK63_RS10395 PF05425 Copper resistance protein D AFK63_RS10400 PF00072 Response regulator receiver domain AFK63_RS10400 PF00486 Transcriptional regulatory protein, C terminal AFK63_RS10405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS10405 PF00512 His Kinase A (phospho-acceptor) domain AFK63_RS10405 PF00672 HAMP domain AFK63_RS10420 PF00589 Phage integrase family AFK63_RS10420 PF02899 Phage integrase, N-terminal SAM-like domain AFK63_RS10430 PF00817 impB/mucB/samB family AFK63_RS10430 PF11799 impB/mucB/samB family C-terminal domain AFK63_RS10430 PF13438 Domain of unknown function (DUF4113) AFK63_RS10435 PF00717 Peptidase S24-like AFK63_RS10575 PF03245 Bacteriophage Rz lysis protein AFK63_RS10580 PF00182 Chitinase class I AFK63_RS10595 PF18755 Restriction Enzyme Adenine Methylase Associated AFK63_RS10595 PF01555 DNA methylase AFK63_RS10600 PF03589 Antitermination protein AFK63_RS10610 PF03374 Phage antirepressor protein KilAC domain AFK63_RS10610 PF09669 Phage regulatory protein Rha (Phage_pRha) AFK63_RS10615 PF05866 Endodeoxyribonuclease RusA AFK63_RS10630 PF05869 DNA N-6-adenine-methyltransferase (Dam) AFK63_RS10640 PF03354 Phage Terminase AFK63_RS10655 PF01381 Helix-turn-helix AFK63_RS10655 PF00717 Peptidase S24-like AFK63_RS10680 PF07825 Excisionase-like protein AFK63_RS10685 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain AFK63_RS10685 PF00589 Phage integrase family AFK63_RS10690 PF00180 Isocitrate/isopropylmalate dehydrogenase AFK63_RS10695 PF00849 RNA pseudouridylate synthase AFK63_RS10700 PF00293 NUDIX domain AFK63_RS10705 PF00672 HAMP domain AFK63_RS10705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFK63_RS10715 PF04356 Protein of unknown function (DUF489) AFK63_RS10720 PF08328 Adenylosuccinate lyase C-terminal AFK63_RS10720 PF00206 Lyase AFK63_RS10725 PF00486 Transcriptional regulatory protein, C terminal AFK63_RS10725 PF00072 Response regulator receiver domain AFK63_RS10730 PF08918 PhoQ Sensor AFK63_RS10730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS10735 PF08007 Cupin superfamily protein AFK63_RS10740 PF01546 Peptidase family M20/M25/M40 AFK63_RS10740 PF07687 Peptidase dimerisation domain AFK63_RS10750 PF08402 TOBE domain AFK63_RS10750 PF00005 ABC transporter AFK63_RS10755 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS10760 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS10765 PF13416 Bacterial extracellular solute-binding protein AFK63_RS10770 PF02146 Sir2 family AFK63_RS10775 PF00480 ROK family AFK63_RS10780 PF12704 MacB-like periplasmic core domain AFK63_RS10780 PF02687 FtsX-like permease family AFK63_RS10785 PF00005 ABC transporter AFK63_RS10790 PF02687 FtsX-like permease family AFK63_RS10790 PF12704 MacB-like periplasmic core domain AFK63_RS10795 PF00270 DEAD/DEAH box helicase AFK63_RS10795 PF02559 CarD-like/TRCF domain AFK63_RS10795 PF17757 UvrB interaction domain AFK63_RS10795 PF03461 TRCF domain AFK63_RS10795 PF00271 Helicase conserved C-terminal domain AFK63_RS10800 PF03734 L,D-transpeptidase catalytic domain AFK63_RS10800 PF01476 LysM domain AFK63_RS10800 PF17969 L,D-transpeptidase C-terminal domain AFK63_RS10805 PF07338 Protein of unknown function (DUF1471) AFK63_RS10810 PF00440 Bacterial regulatory proteins, tetR family AFK63_RS10815 PF05433 Glycine zipper 2TM domain AFK63_RS10820 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFK63_RS10825 PF05728 Uncharacterised protein family (UPF0227) AFK63_RS10830 PF00933 Glycosyl hydrolase family 3 N terminal domain AFK63_RS10835 PF01636 Phosphotransferase enzyme family AFK63_RS10840 PF13036 Peptidoglycan-synthase activator LpoB AFK63_RS10845 PF07233 Protein of unknown function (DUF1425) AFK63_RS10850 PF01230 HIT domain AFK63_RS10855 PF07715 TonB-dependent Receptor Plug Domain AFK63_RS10855 PF00593 TonB dependent receptor AFK63_RS10860 PF00367 phosphotransferase system, EIIB AFK63_RS10860 PF02378 Phosphotransferase system, EIIC AFK63_RS10865 PF01026 TatD related DNase AFK63_RS10870 PF09115 DNA polymerase III, delta subunit, C terminal AFK63_RS10875 PF02223 Thymidylate kinase AFK63_RS10880 PF02618 YceG-like family AFK63_RS10885 PF01063 Amino-transferase class IV AFK63_RS10890 PF02801 Beta-ketoacyl synthase, C-terminal domain AFK63_RS10890 PF00109 Beta-ketoacyl synthase, N-terminal domain AFK63_RS10895 PF00550 Phosphopantetheine attachment site AFK63_RS10905 PF00698 Acyl transferase domain AFK63_RS10910 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AFK63_RS10910 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AFK63_RS10915 PF02504 Fatty acid synthesis protein AFK63_RS10920 PF01783 Ribosomal L32p protein family AFK63_RS10925 PF02620 Large ribosomal RNA subunit accumulation protein YceD AFK63_RS10930 PF02545 Maf-like protein AFK63_RS10935 PF11254 Protein of unknown function (DUF3053) AFK63_RS10940 PF01479 S4 domain AFK63_RS10940 PF00849 RNA pseudouridylate synthase AFK63_RS10945 PF12111 Polyribonucleotide phosphorylase C terminal AFK63_RS10945 PF00575 S1 RNA binding domain AFK63_RS10945 PF10150 Ribonuclease E/G family AFK63_RS10950 PF03466 LysR substrate binding domain AFK63_RS10950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS10955 PF07690 Major Facilitator Superfamily AFK63_RS10960 PF00669 Bacterial flagellin N-terminal helical region AFK63_RS10965 PF00460 Flagella basal body rod protein AFK63_RS10965 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AFK63_RS10970 PF10135 Rod binding protein AFK63_RS10970 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AFK63_RS10975 PF02119 Flagellar P-ring protein AFK63_RS10980 PF02107 Flagellar L-ring protein AFK63_RS10985 PF00460 Flagella basal body rod protein AFK63_RS10985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AFK63_RS10990 PF00460 Flagella basal body rod protein AFK63_RS10990 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AFK63_RS10995 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AFK63_RS10995 PF00460 Flagella basal body rod protein AFK63_RS10995 PF07559 Flagellar basal body protein FlaE AFK63_RS11000 PF13860 FlgD Ig-like domain AFK63_RS11000 PF03963 Flagellar hook capping protein - N-terminal region AFK63_RS11000 PF13861 FlgD Tudor-like domain AFK63_RS11005 PF00460 Flagella basal body rod protein AFK63_RS11005 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AFK63_RS11010 PF00460 Flagella basal body rod protein AFK63_RS11015 PF13144 Chaperone for flagella basal body P-ring formation AFK63_RS11020 PF04316 Anti-sigma-28 factor, FlgM AFK63_RS11025 PF05130 FlgN protein AFK63_RS11030 PF03023 Lipid II flippase MurJ AFK63_RS11035 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFK63_RS11040 PF04337 Protein of unknown function, DUF480 AFK63_RS11045 PF13302 Acetyltransferase (GNAT) domain AFK63_RS11050 PF07690 Major Facilitator Superfamily AFK63_RS11055 PF04399 Glutaredoxin 2, C terminal domain AFK63_RS11055 PF13417 Glutathione S-transferase, N-terminal domain AFK63_RS11060 PF07273 Protein of unknown function (DUF1439) AFK63_RS11065 PF01979 Amidohydrolase family AFK63_RS11070 PF06183 DinI-like family AFK63_RS11075 PF13991 BssS protein family AFK63_RS11080 PF01266 FAD dependent oxidoreductase AFK63_RS11085 PF01292 Prokaryotic cytochrome b561 AFK63_RS11090 PF04264 YceI-like domain AFK63_RS11095 PF00581 Rhodanese-like domain AFK63_RS11095 PF12368 Rhodanase C-terminal AFK63_RS11095 PF17773 UPF0176 acylphosphatase like domain AFK63_RS11100 PF03279 Bacterial lipid A biosynthesis acyltransferase AFK63_RS11105 PF13984 MsyB protein AFK63_RS11110 PF07119 Protein of unknown function (DUF1375) AFK63_RS11115 PF00535 Glycosyl transferase family 2 AFK63_RS11120 PF04349 Periplasmic glucan biosynthesis protein, MdoG AFK63_RS11125 PF01757 Acyltransferase family AFK63_RS11130 PF13091 PLD-like domain AFK63_RS11135 PF01661 Macro domain AFK63_RS11145 PF06496 Protein of unknown function (DUF1097) AFK63_RS11150 PF02613 Nitrate reductase delta subunit AFK63_RS11155 PF02811 PHP domain AFK63_RS11160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AFK63_RS11165 PF00419 Fimbrial protein AFK63_RS11170 PF13953 PapC C-terminal domain AFK63_RS11170 PF00577 Outer membrane usher protein AFK63_RS11170 PF13954 PapC N-terminal domain AFK63_RS11175 PF02753 Pili assembly chaperone PapD, C-terminal domain AFK63_RS11175 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AFK63_RS11180 PF00419 Fimbrial protein AFK63_RS11190 PF00384 Molybdopterin oxidoreductase AFK63_RS11205 PF02562 PhoH-like protein AFK63_RS11210 PF04261 Dyp-type peroxidase family AFK63_RS11215 PF09375 Imelysin AFK63_RS11215 PF13473 Cupredoxin-like domain AFK63_RS11220 PF03239 Iron permease FTR1 family AFK63_RS11225 PF07662 Na+ dependent nucleoside transporter C-terminus AFK63_RS11225 PF07670 Nucleoside recognition AFK63_RS11225 PF01773 Na+ dependent nucleoside transporter N-terminus AFK63_RS11235 PF00474 Sodium:solute symporter family AFK63_RS11240 PF00171 Aldehyde dehydrogenase family AFK63_RS11240 PF01619 Proline dehydrogenase AFK63_RS11240 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AFK63_RS11240 PF14850 DNA-binding domain of Proline dehydrogenase AFK63_RS11245 PF00440 Bacterial regulatory proteins, tetR family AFK63_RS11245 PF08362 YcdC-like protein, C-terminal region AFK63_RS11250 PF00296 Luciferase-like monooxygenase AFK63_RS11255 PF00857 Isochorismatase family AFK63_RS11260 PF01042 Endoribonuclease L-PSP AFK63_RS11265 PF00561 alpha/beta hydrolase fold AFK63_RS11270 PF00881 Nitroreductase family AFK63_RS11275 PF01613 Flavin reductase like domain AFK63_RS11280 PF00860 Permease family AFK63_RS11290 PF03358 NADPH-dependent FMN reductase AFK63_RS11295 PF13993 YccJ-like protein AFK63_RS11305 PF03502 Nucleoside-specific channel-forming protein, Tsx AFK63_RS11310 PF16347 Domain of unknown function (DUF4976) AFK63_RS11310 PF00884 Sulfatase AFK63_RS11315 PF04055 Radical SAM superfamily AFK63_RS11315 PF13186 Iron-sulfur cluster-binding domain AFK63_RS11345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AFK63_RS11350 PF01027 Inhibitor of apoptosis-promoting Bax1 AFK63_RS11355 PF04358 DsrC like protein AFK63_RS11360 PF00708 Acylphosphatase AFK63_RS11365 PF10672 S-adenosylmethionine-dependent methyltransferase AFK63_RS11365 PF17785 PUA-like domain AFK63_RS11370 PF08755 Hemimethylated DNA-binding protein YccV like AFK63_RS11375 PF13380 CoA binding domain AFK63_RS11380 PF02142 MGS-like domain AFK63_RS11385 PF00580 UvrD/REP helicase N-terminal domain AFK63_RS11385 PF12462 DNA helicase IV / RNA helicase N terminal AFK63_RS11385 PF13361 UvrD-like helicase C-terminal domain AFK63_RS11390 PF03733 Inner membrane component domain AFK63_RS11395 PF12805 FUSC-like inner membrane protein yccS AFK63_RS11400 PF04993 TfoX N-terminal domain AFK63_RS11400 PF04994 TfoX C-terminal domain AFK63_RS11405 PF03846 Cell division inhibitor SulA AFK63_RS11410 PF01389 OmpA-like transmembrane domain AFK63_RS11410 PF00691 OmpA family AFK63_RS11415 PF06303 MatP N-terminal domain AFK63_RS11415 PF17414 MatP C-terminal ribbon-helix-helix domain AFK63_RS11420 PF05362 Lon protease (S16) C-terminal proteolytic domain AFK63_RS11420 PF13654 AAA domain AFK63_RS11425 PF07977 FabA-like domain AFK63_RS11430 PF03886 ABC-type transport auxiliary lipoprotein component AFK63_RS11435 PF02470 MlaD protein AFK63_RS11440 PF04403 Paraquat-inducible protein A AFK63_RS11445 PF00005 ABC transporter AFK63_RS11445 PF16326 ABC transporter C-terminal domain AFK63_RS11445 PF12848 ABC transporter AFK63_RS11450 PF01170 Putative RNA methylase family UPF0020 AFK63_RS11450 PF10672 S-adenosylmethionine-dependent methyltransferase AFK63_RS11450 PF02926 THUMP domain AFK63_RS11455 PF03473 MOSC domain AFK63_RS11455 PF03476 MOSC N-terminal beta barrel domain AFK63_RS11455 PF00111 2Fe-2S iron-sulfur cluster binding domain AFK63_RS11460 PF07126 Cell-division protein ZapC AFK63_RS11465 PF01180 Dihydroorotate dehydrogenase AFK63_RS11470 PF03358 NADPH-dependent FMN reductase AFK63_RS11475 PF09084 NMT1/THI5 like AFK63_RS11480 PF00296 Luciferase-like monooxygenase AFK63_RS11485 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS11490 PF00005 ABC transporter AFK63_RS11495 PF01433 Peptidase family M1 domain AFK63_RS11495 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AFK63_RS11495 PF11940 Domain of unknown function (DUF3458) Ig-like fold AFK63_RS11500 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AFK63_RS11500 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AFK63_RS11505 PF01336 OB-fold nucleic acid binding domain AFK63_RS11505 PF00152 tRNA synthetases class II (D, K and N) AFK63_RS11510 PF00267 Gram-negative porin AFK63_RS11515 PF00155 Aminotransferase class I and II AFK63_RS11520 PF00753 Metallo-beta-lactamase superfamily AFK63_RS11525 PF05951 Bacterial protein of unknown function (DUF882) AFK63_RS11530 PF01471 Putative peptidoglycan binding domain AFK63_RS11530 PF03734 L,D-transpeptidase catalytic domain AFK63_RS11535 PF04310 MukB N-terminal AFK63_RS11535 PF16330 MukB hinge domain AFK63_RS11540 PF04288 MukE-like family AFK63_RS11545 PF03882 MukF winged-helix domain AFK63_RS11545 PF17193 MukF C-terminal domain AFK63_RS11545 PF17192 MukF middle domain AFK63_RS11550 PF13847 Methyltransferase domain AFK63_RS11555 PF02698 DUF218 domain AFK63_RS11560 PF01636 Phosphotransferase enzyme family AFK63_RS11570 PF01037 Lrp/AsnC ligand binding domain AFK63_RS11570 PF13404 AsnC-type helix-turn-helix domain AFK63_RS11575 PF02348 Cytidylyltransferase AFK63_RS11580 PF03966 Trm112p-like protein AFK63_RS11585 PF06224 Winged helix DNA-binding domain AFK63_RS11590 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AFK63_RS11595 PF00664 ABC transporter transmembrane region AFK63_RS11595 PF00005 ABC transporter AFK63_RS11600 PF03772 Competence protein AFK63_RS11600 PF00753 Metallo-beta-lactamase superfamily AFK63_RS11605 PF00216 Bacterial DNA-binding protein AFK63_RS11610 PF00575 S1 RNA binding domain AFK63_RS11615 PF02224 Cytidylate kinase AFK63_RS11620 PF01435 Peptidase family M48 AFK63_RS11625 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AFK63_RS11630 PF00266 Aminotransferase class-V AFK63_RS11635 PF04239 Protein of unknown function (DUF421) AFK63_RS11640 PF18381 YcaO cyclodehydratase C-terminal domain AFK63_RS11640 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AFK63_RS11645 PF01226 Formate/nitrite transporter AFK63_RS11650 PF02901 Pyruvate formate lyase-like AFK63_RS11650 PF01228 Glycine radical AFK63_RS11655 PF04055 Radical SAM superfamily AFK63_RS11660 PF07690 Major Facilitator Superfamily AFK63_RS11665 PF02403 Seryl-tRNA synthetase N-terminal domain AFK63_RS11665 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AFK63_RS11670 PF00004 ATPase family associated with various cellular activities (AAA) AFK63_RS11670 PF12002 MgsA AAA+ ATPase C terminal AFK63_RS11670 PF16193 AAA C-terminal domain AFK63_RS11675 PF03548 Outer membrane lipoprotein carrier protein LolA AFK63_RS11680 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AFK63_RS11680 PF17854 FtsK alpha domain AFK63_RS11680 PF01580 FtsK/SpoIIIE family AFK63_RS11680 PF09397 Ftsk gamma domain AFK63_RS11685 PF01037 Lrp/AsnC ligand binding domain AFK63_RS11690 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFK63_RS11695 PF00664 ABC transporter transmembrane region AFK63_RS11695 PF00005 ABC transporter AFK63_RS11700 PF00005 ABC transporter AFK63_RS11700 PF00664 ABC transporter transmembrane region AFK63_RS11705 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AFK63_RS11710 PF01176 Translation initiation factor 1A / IF-1 AFK63_RS11715 PF02861 Clp amino terminal domain, pathogenicity island component AFK63_RS11715 PF00004 ATPase family associated with various cellular activities (AAA) AFK63_RS11715 PF07724 AAA domain (Cdc48 subfamily) AFK63_RS11715 PF17871 AAA lid domain AFK63_RS11715 PF10431 C-terminal, D2-small domain, of ClpB protein AFK63_RS11720 PF02617 ATP-dependent Clp protease adaptor protein ClpS AFK63_RS11725 PF00313 'Cold-shock' DNA-binding domain AFK63_RS11730 PF12704 MacB-like periplasmic core domain AFK63_RS11730 PF02687 FtsX-like permease family AFK63_RS11730 PF00005 ABC transporter AFK63_RS11735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AFK63_RS11740 PF04393 Protein of unknown function (DUF535) AFK63_RS11745 PF11398 Protein of unknown function (DUF2813) AFK63_RS11750 PF03956 Lysine exporter LysO AFK63_RS11755 PF03063 Prismane/CO dehydrogenase family AFK63_RS11760 PF00175 Oxidoreductase NAD-binding domain AFK63_RS11760 PF00111 2Fe-2S iron-sulfur cluster binding domain AFK63_RS11760 PF00970 Oxidoreductase FAD-binding domain AFK63_RS11770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AFK63_RS11770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AFK63_RS11770 PF00205 Thiamine pyrophosphate enzyme, central domain AFK63_RS11775 PF01212 Beta-eliminating lyase AFK63_RS11780 PF01370 NAD dependent epimerase/dehydratase family AFK63_RS11785 PF01510 N-acetylmuramoyl-L-alanine amidase AFK63_RS11790 PF01906 Putative heavy-metal-binding AFK63_RS11795 PF12883 Protein of unknown function (DUF3828) AFK63_RS11800 PF00005 ABC transporter AFK63_RS11805 PF00497 Bacterial extracellular solute-binding proteins, family 3 AFK63_RS11810 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS11815 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS11820 PF00497 Bacterial extracellular solute-binding proteins, family 3 AFK63_RS11825 PF12833 Helix-turn-helix domain AFK63_RS11835 PF01306 LacY proton/sugar symporter AFK63_RS11840 PF07470 Glycosyl Hydrolase Family 88 AFK63_RS11845 PF05958 tRNA (Uracil-5-)-methyltransferase AFK63_RS11850 PF10767 Protein of unknown function (DUF2593) AFK63_RS11855 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS11860 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS11865 PF00005 ABC transporter AFK63_RS11865 PF08402 TOBE domain AFK63_RS11870 PF13416 Bacterial extracellular solute-binding protein AFK63_RS11875 PF10722 Putative bacterial sensory transduction regulator AFK63_RS11880 PF18030 RimK PreATP-grasp domain AFK63_RS11880 PF08443 RimK-like ATP-grasp domain AFK63_RS11885 PF00881 Nitroreductase family AFK63_RS11890 PF11045 Putative inner membrane protein of Enterobacteriaceae AFK63_RS11895 PF02080 TrkA-C domain AFK63_RS11895 PF06826 Predicted Permease Membrane Region AFK63_RS11915 PF00440 Bacterial regulatory proteins, tetR family AFK63_RS11920 PF07690 Major Facilitator Superfamily AFK63_RS11925 PF00700 Bacterial flagellin C-terminal helical region AFK63_RS11925 PF00669 Bacterial flagellin N-terminal helical region AFK63_RS11925 PF08884 Flagellin D3 domain AFK63_RS11935 PF07690 Major Facilitator Superfamily AFK63_RS11945 PF01569 PAP2 superfamily AFK63_RS11950 PF00455 DeoR C terminal sensor domain AFK63_RS11950 PF08220 DeoR-like helix-turn-helix domain AFK63_RS11955 PF00768 D-alanyl-D-alanine carboxypeptidase AFK63_RS11955 PF07943 Penicillin-binding protein 5, C-terminal domain AFK63_RS11960 PF13417 Glutathione S-transferase, N-terminal domain AFK63_RS11960 PF00043 Glutathione S-transferase, C-terminal domain AFK63_RS11965 PF07995 Glucose / Sorbosone dehydrogenase AFK63_RS11975 PF02796 Helix-turn-helix domain of resolvase AFK63_RS11975 PF00239 Resolvase, N terminal domain AFK63_RS11985 PF02463 RecF/RecN/SMC N terminal domain AFK63_RS12015 PF00919 Uncharacterized protein family UPF0004 AFK63_RS12015 PF18693 TRAM domain AFK63_RS12015 PF04055 Radical SAM superfamily AFK63_RS12020 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS12020 PF12911 N-terminal TM domain of oligopeptide transport permease C AFK63_RS12025 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS12030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AFK63_RS12035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AFK63_RS12035 PF00005 ABC transporter AFK63_RS12040 PF00994 Probable molybdopterin binding domain AFK63_RS12040 PF03453 MoeA N-terminal region (domain I and II) AFK63_RS12040 PF03454 MoeA C-terminal region (domain IV) AFK63_RS12045 PF00899 ThiF family AFK63_RS12050 PF00356 Bacterial regulatory proteins, lacI family AFK63_RS12055 PF07690 Major Facilitator Superfamily AFK63_RS12060 PF16338 Domain of unknown function (DUF4968) AFK63_RS12060 PF13802 Galactose mutarotase-like AFK63_RS12060 PF17137 Domain of unknown function (DUF5110) AFK63_RS12060 PF01055 Glycosyl hydrolases family 31 AFK63_RS12065 PF00005 ABC transporter AFK63_RS12065 PF12848 ABC transporter AFK63_RS12070 PF03734 L,D-transpeptidase catalytic domain AFK63_RS12070 PF17969 L,D-transpeptidase C-terminal domain AFK63_RS12075 PF02321 Outer membrane efflux protein AFK63_RS12080 PF07690 Major Facilitator Superfamily AFK63_RS12085 PF00529 HlyD membrane-fusion protein of T1SS AFK63_RS12085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AFK63_RS12090 PF03600 Citrate transporter AFK63_RS12095 PF01325 Iron dependent repressor, N-terminal DNA binding domain AFK63_RS12095 PF02742 Iron dependent repressor, metal binding and dimerisation domain AFK63_RS12100 PF00884 Sulfatase AFK63_RS12105 PF13505 Outer membrane protein beta-barrel domain AFK63_RS12110 PF00892 EamA-like transporter family AFK63_RS12115 PF00210 Ferritin-like domain AFK63_RS12120 PF00497 Bacterial extracellular solute-binding proteins, family 3 AFK63_RS12125 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS12130 PF00005 ABC transporter AFK63_RS12135 PF00924 Mechanosensitive ion channel AFK63_RS12140 PF05971 RNA methyltransferase AFK63_RS12150 PF01258 Prokaryotic dksA/traR C4-type zinc finger AFK63_RS12160 PF02885 Glycosyl transferase family, helical bundle domain AFK63_RS12170 PF02753 Pili assembly chaperone PapD, C-terminal domain AFK63_RS12170 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AFK63_RS12175 PF13953 PapC C-terminal domain AFK63_RS12175 PF13954 PapC N-terminal domain AFK63_RS12175 PF00577 Outer membrane usher protein AFK63_RS12190 PF06733 DEAD_2 AFK63_RS12190 PF13307 Helicase C-terminal domain AFK63_RS12190 PF00270 DEAD/DEAH box helicase AFK63_RS12195 PF03123 CAT RNA binding domain AFK63_RS12195 PF00874 PRD domain AFK63_RS12200 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AFK63_RS12200 PF02378 Phosphotransferase system, EIIC AFK63_RS12200 PF00367 phosphotransferase system, EIIB AFK63_RS12205 PF00232 Glycosyl hydrolase family 1 AFK63_RS12210 PF00232 Glycosyl hydrolase family 1 AFK63_RS12215 PF02056 Family 4 glycosyl hydrolase AFK63_RS12215 PF11975 Family 4 glycosyl hydrolase C-terminal domain AFK63_RS12220 PF00367 phosphotransferase system, EIIB AFK63_RS12220 PF02378 Phosphotransferase system, EIIC AFK63_RS12225 PF07702 UTRA domain AFK63_RS12225 PF00392 Bacterial regulatory proteins, gntR family AFK63_RS12230 PF00271 Helicase conserved C-terminal domain AFK63_RS12230 PF00270 DEAD/DEAH box helicase AFK63_RS12235 PF11076 Putative inner membrane protein YbhQ AFK63_RS12240 PF03372 Endonuclease/Exonuclease/phosphatase family AFK63_RS12245 PF13091 PLD-like domain AFK63_RS12250 PF03706 Lysylphosphatidylglycerol synthase TM region AFK63_RS12255 PF01027 Inhibitor of apoptosis-promoting Bax1 AFK63_RS12260 PF02391 MoaE protein AFK63_RS12265 PF02597 ThiS family AFK63_RS12270 PF01967 MoaC family AFK63_RS12275 PF00994 Probable molybdopterin binding domain AFK63_RS12280 PF06463 Molybdenum Cofactor Synthesis C AFK63_RS12280 PF04055 Radical SAM superfamily AFK63_RS12285 PF01933 Uncharacterised protein family UPF0052 AFK63_RS12290 PF04851 Type III restriction enzyme, res subunit AFK63_RS12290 PF12344 Ultra-violet resistance protein B AFK63_RS12290 PF02151 UvrB/uvrC motif AFK63_RS12290 PF17757 UvrB interaction domain AFK63_RS12290 PF00271 Helicase conserved C-terminal domain AFK63_RS12295 PF00005 ABC transporter AFK63_RS12305 PF08241 Methyltransferase domain AFK63_RS12310 PF00155 Aminotransferase class I and II AFK63_RS12315 PF06968 Biotin and Thiamin Synthesis associated domain AFK63_RS12315 PF04055 Radical SAM superfamily AFK63_RS12320 PF00202 Aminotransferase class-III AFK63_RS12330 PF01161 Phosphatidylethanolamine-binding protein AFK63_RS12335 PF01095 Pectinesterase AFK63_RS12340 PF10282 Lactonase, 7-bladed beta-propeller AFK63_RS12350 PF03459 TOBE domain AFK63_RS12350 PF00005 ABC transporter AFK63_RS12355 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS12365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS12365 PF03459 TOBE domain AFK63_RS12370 PF00005 ABC transporter AFK63_RS12375 PF16363 GDP-mannose 4,6 dehydratase AFK63_RS12380 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AFK63_RS12380 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AFK63_RS12385 PF10509 Galactokinase galactose-binding signature AFK63_RS12385 PF00288 GHMP kinases N terminal domain AFK63_RS12385 PF08544 GHMP kinases C terminal AFK63_RS12390 PF01263 Aldose 1-epimerase AFK63_RS12395 PF00300 Histidine phosphatase superfamily (branch 1) AFK63_RS12400 PF00793 DAHP synthetase I family AFK63_RS12410 PF01545 Cation efflux family AFK63_RS12415 PF04973 Nicotinamide mononucleotide transporter AFK63_RS12420 PF02445 Quinolinate synthetase A protein AFK63_RS12455 PF16331 TolA binding protein trimerisation AFK63_RS12455 PF13174 Tetratricopeptide repeat AFK63_RS12460 PF00691 OmpA family AFK63_RS12465 PF04052 TolB amino-terminal domain AFK63_RS12465 PF07676 WD40-like Beta Propeller Repeat AFK63_RS12470 PF06519 TolA C-terminal AFK63_RS12475 PF02472 Biopolymer transport protein ExbD/TolR AFK63_RS12480 PF01618 MotA/TolQ/ExbB proton channel family AFK63_RS12485 PF03061 Thioesterase superfamily AFK63_RS12490 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) AFK63_RS12495 PF02322 Cytochrome bd terminal oxidase subunit II AFK63_RS12500 PF01654 Cytochrome bd terminal oxidase subunit I AFK63_RS12505 PF02629 CoA binding domain AFK63_RS12505 PF00549 CoA-ligase AFK63_RS12510 PF08442 ATP-grasp domain AFK63_RS12510 PF00549 CoA-ligase AFK63_RS12515 PF00364 Biotin-requiring enzyme AFK63_RS12515 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AFK63_RS12515 PF02817 e3 binding domain AFK63_RS12520 PF16870 2-oxoglutarate dehydrogenase C-terminal AFK63_RS12520 PF00676 Dehydrogenase E1 component AFK63_RS12520 PF16078 2-oxoglutarate dehydrogenase N-terminus AFK63_RS12520 PF02779 Transketolase, pyrimidine binding domain AFK63_RS12525 PF13085 2Fe-2S iron-sulfur cluster binding domain AFK63_RS12530 PF00890 FAD binding domain AFK63_RS12530 PF02910 Fumarate reductase flavoprotein C-term AFK63_RS12535 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AFK63_RS12540 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AFK63_RS12545 PF00285 Citrate synthase, C-terminal domain AFK63_RS12550 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AFK63_RS12550 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AFK63_RS12550 PF06827 Zinc finger found in FPG and IleRS AFK63_RS12575 PF03746 LamB/YcsF family AFK63_RS12580 PF02626 Carboxyltransferase domain, subdomain A and B AFK63_RS12585 PF02682 Carboxyltransferase domain, subdomain C and D AFK63_RS12590 PF01784 NIF3 (NGG1p interacting factor 3) AFK63_RS12595 PF03441 FAD binding domain of DNA photolyase AFK63_RS12595 PF00875 DNA photolyase AFK63_RS12600 PF08349 Protein of unknown function (DUF1722) AFK63_RS12605 PF10725 Protein of unknown function (DUF2517) AFK63_RS12610 PF03814 Potassium-transporting ATPase A subunit AFK63_RS12620 PF02669 K+-transporting ATPase, c chain AFK63_RS12625 PF13493 Domain of unknown function (DUF4118) AFK63_RS12625 PF13492 GAF domain AFK63_RS12625 PF02702 Osmosensitive K+ channel His kinase sensor domain AFK63_RS12625 PF00512 His Kinase A (phospho-acceptor) domain AFK63_RS12625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS12630 PF00072 Response regulator receiver domain AFK63_RS12630 PF00486 Transcriptional regulatory protein, C terminal AFK63_RS12635 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AFK63_RS12635 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AFK63_RS12635 PF01276 Orn/Lys/Arg decarboxylase, major domain AFK63_RS12640 PF13520 Amino acid permease AFK63_RS12645 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AFK63_RS12645 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AFK63_RS12645 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AFK63_RS12645 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AFK63_RS12650 PF03925 SeqA protein C-terminal domain AFK63_RS12650 PF17206 SeqA protein N-terminal domain AFK63_RS12655 PF12697 Alpha/beta hydrolase family AFK63_RS12660 PF01402 Ribbon-helix-helix protein, copG family AFK63_RS12665 PF00258 Flavodoxin AFK63_RS12670 PF01475 Ferric uptake regulator family AFK63_RS12680 PF00728 Glycosyl hydrolase family 20, catalytic domain AFK63_RS12680 PF02838 Glycosyl hydrolase family 20, domain 2 AFK63_RS12680 PF03173 Putative carbohydrate binding domain AFK63_RS12680 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain AFK63_RS12685 PF03573 outer membrane porin, OprD family AFK63_RS12690 PF00749 tRNA synthetases class I (E and Q), catalytic domain AFK63_RS12690 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AFK63_RS12700 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AFK63_RS12700 PF02378 Phosphotransferase system, EIIC AFK63_RS12700 PF00367 phosphotransferase system, EIIB AFK63_RS12705 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AFK63_RS12710 PF01979 Amidohydrolase family AFK63_RS12715 PF00480 ROK family AFK63_RS12715 PF01047 MarR family AFK63_RS12720 PF13344 Haloacid dehalogenase-like hydrolase AFK63_RS12725 PF00733 Asparagine synthase AFK63_RS12725 PF13537 Glutamine amidotransferase domain AFK63_RS12765 PF01494 FAD binding domain AFK63_RS12770 PF01938 TRAM domain AFK63_RS12770 PF00919 Uncharacterized protein family UPF0004 AFK63_RS12770 PF04055 Radical SAM superfamily AFK63_RS12775 PF02562 PhoH-like protein AFK63_RS12780 PF02130 Uncharacterized protein family UPF0054 AFK63_RS12785 PF00571 CBS domain AFK63_RS12785 PF03471 Transporter associated domain AFK63_RS12790 PF00795 Carbon-nitrogen hydrolase AFK63_RS12795 PF00497 Bacterial extracellular solute-binding proteins, family 3 AFK63_RS12800 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS12805 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS12810 PF00005 ABC transporter AFK63_RS12825 PF07295 Zinc-ribbon containing domain AFK63_RS12830 PF00133 tRNA synthetases class I (I, L, M and V) AFK63_RS12830 PF08264 Anticodon-binding domain of tRNA AFK63_RS12830 PF13603 Leucyl-tRNA synthetase, Domain 2 AFK63_RS12835 PF04390 Lipopolysaccharide-assembly AFK63_RS12840 PF06144 DNA polymerase III, delta subunit AFK63_RS12840 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AFK63_RS12845 PF01467 Cytidylyltransferase-like AFK63_RS12855 PF02590 Predicted SPOUT methyltransferase AFK63_RS12860 PF00905 Penicillin binding protein transpeptidase domain AFK63_RS12860 PF03717 Penicillin-binding Protein dimerisation domain AFK63_RS12865 PF01098 Cell cycle protein AFK63_RS12870 PF05036 Sporulation related domain AFK63_RS12870 PF03330 Lytic transglycolase AFK63_RS12875 PF07943 Penicillin-binding protein 5, C-terminal domain AFK63_RS12875 PF00768 D-alanyl-D-alanine carboxypeptidase AFK63_RS12880 PF04359 Protein of unknown function (DUF493) AFK63_RS12885 PF03099 Biotin/lipoate A/B protein ligase family AFK63_RS12890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS12890 PF03466 LysR substrate binding domain AFK63_RS12895 PF04055 Radical SAM superfamily AFK63_RS12895 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AFK63_RS12900 PF02416 mttA/Hcf106 family AFK63_RS12905 PF00795 Carbon-nitrogen hydrolase AFK63_RS12910 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AFK63_RS12915 PF00313 'Cold-shock' DNA-binding domain AFK63_RS12920 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP AFK63_RS12925 PF03606 C4-dicarboxylate anaerobic carrier AFK63_RS12930 PF00445 Ribonuclease T2 family AFK63_RS12940 PF16657 Maltogenic Amylase, C-terminal domain AFK63_RS12940 PF00128 Alpha amylase, catalytic domain AFK63_RS12945 PF16657 Maltogenic Amylase, C-terminal domain AFK63_RS12945 PF00128 Alpha amylase, catalytic domain AFK63_RS12950 PF00005 ABC transporter AFK63_RS12950 PF08402 TOBE domain AFK63_RS12955 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS12960 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS12965 PF01547 Bacterial extracellular solute-binding protein AFK63_RS12970 PF02447 GntP family permease AFK63_RS12975 PF14760 Rnk N-terminus AFK63_RS12975 PF01272 Transcription elongation factor, GreA/GreB, C-term AFK63_RS12980 PF00107 Zinc-binding dehydrogenase AFK63_RS12980 PF13823 Alcohol dehydrogenase GroES-associated AFK63_RS12980 PF08240 Alcohol dehydrogenase GroES-like domain AFK63_RS12985 PF00582 Universal stress protein family AFK63_RS12990 PF13192 Thioredoxin domain AFK63_RS12990 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFK63_RS12995 PF10417 C-terminal domain of 1-Cys peroxiredoxin AFK63_RS12995 PF00578 AhpC/TSA family AFK63_RS13000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS13000 PF03466 LysR substrate binding domain AFK63_RS13005 PF00155 Aminotransferase class I and II AFK63_RS13010 PF00596 Class II Aldolase and Adducin N-terminal domain AFK63_RS13020 PF03079 ARD/ARD' family AFK63_RS13025 PF00668 Condensation domain AFK63_RS13025 PF00501 AMP-binding enzyme AFK63_RS13025 PF00975 Thioesterase domain AFK63_RS13025 PF13193 AMP-binding enzyme C-terminal domain AFK63_RS13025 PF00550 Phosphopantetheine attachment site AFK63_RS13030 PF03621 MbtH-like protein AFK63_RS13035 PF11806 Domain of unknown function (DUF3327) AFK63_RS13035 PF00756 Putative esterase AFK63_RS13040 PF07715 TonB-dependent Receptor Plug Domain AFK63_RS13040 PF00593 TonB dependent receptor AFK63_RS13045 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AFK63_RS13045 PF01648 4'-phosphopantetheinyl transferase superfamily AFK63_RS13055 PF04107 Glutamate-cysteine ligase family 2(GCS2) AFK63_RS13060 PF02203 Tar ligand binding domain homologue AFK63_RS13060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFK63_RS13060 PF00672 HAMP domain AFK63_RS13065 PF00581 Rhodanese-like domain AFK63_RS13065 PF11127 Protein of unknown function (DUF2892) AFK63_RS13070 PF01022 Bacterial regulatory protein, arsR family AFK63_RS13075 PF07690 Major Facilitator Superfamily AFK63_RS13100 PF00255 Glutathione peroxidase AFK63_RS13110 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AFK63_RS13110 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AFK63_RS13120 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AFK63_RS13120 PF00367 phosphotransferase system, EIIB AFK63_RS13120 PF02378 Phosphotransferase system, EIIC AFK63_RS13125 PF00356 Bacterial regulatory proteins, lacI family AFK63_RS13125 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AFK63_RS13130 PF09190 DALR domain AFK63_RS13130 PF01406 tRNA synthetases class I (C) catalytic domain AFK63_RS13135 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AFK63_RS13140 PF00149 Calcineurin-like phosphoesterase AFK63_RS13145 PF00731 AIR carboxylase AFK63_RS13150 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AFK63_RS13150 PF02222 ATP-grasp domain AFK63_RS13155 PF01053 Cys/Met metabolism PLP-dependent enzyme AFK63_RS13160 PF00571 CBS domain AFK63_RS13160 PF00291 Pyridoxal-phosphate dependent enzyme AFK63_RS13165 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS13170 PF00005 ABC transporter AFK63_RS13170 PF09383 NIL domain AFK63_RS13175 PF03180 NLPA lipoprotein AFK63_RS13185 PF00005 ABC transporter AFK63_RS13190 PF13472 GDSL-like Lipase/Acylhydrolase family AFK63_RS13195 PF00106 short chain dehydrogenase AFK63_RS13200 PF00085 Thioredoxin AFK63_RS13205 PF16200 C-terminal region of band_7 AFK63_RS13205 PF01145 SPFH domain / Band 7 family AFK63_RS13210 PF01957 NfeD-like C-terminal, partner-binding AFK63_RS13225 PF13411 MerR HTH family regulatory protein AFK63_RS13230 PF00403 Heavy-metal-associated domain AFK63_RS13235 PF01963 TraB family AFK63_RS13240 PF04073 Aminoacyl-tRNA editing domain AFK63_RS13245 PF02872 5'-nucleotidase, C-terminal domain AFK63_RS13245 PF00149 Calcineurin-like phosphoesterase AFK63_RS13255 PF02254 TrkA-N domain AFK63_RS13255 PF00999 Sodium/hydrogen exchanger family AFK63_RS13260 PF00294 pfkB family carbohydrate kinase AFK63_RS13265 PF00762 Ferrochelatase AFK63_RS13270 PF02595 Glycerate kinase family AFK63_RS13275 PF02447 GntP family permease AFK63_RS13280 PF17853 GGDEF-like domain AFK63_RS13280 PF13556 PucR C-terminal helix-turn-helix domain AFK63_RS13280 PF05651 Putative sugar diacid recognition AFK63_RS13285 PF05191 Adenylate kinase, active site lid AFK63_RS13290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS13290 PF00183 Hsp90 protein AFK63_RS13295 PF13662 Toprim domain AFK63_RS13295 PF02132 RecR protein AFK63_RS13300 PF02575 YbaB/EbfC DNA-binding family AFK63_RS13305 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AFK63_RS13305 PF12169 DNA polymerase III subunits gamma and tau domain III AFK63_RS13305 PF12170 DNA polymerase III tau subunit V interacting with alpha AFK63_RS13310 PF00156 Phosphoribosyl transferase domain AFK63_RS13315 PF04304 Protein of unknown function (DUF454) AFK63_RS13320 PF07445 Primosomal replication protein priC AFK63_RS13325 PF12795 Mechanosensitive ion channel porin domain AFK63_RS13325 PF00924 Mechanosensitive ion channel AFK63_RS13325 PF12794 Mechanosensitive ion channel inner membrane domain 1 AFK63_RS13330 PF00440 Bacterial regulatory proteins, tetR family AFK63_RS13330 PF08361 MAATS-type transcriptional repressor, C-terminal region AFK63_RS13335 PF00529 HlyD membrane-fusion protein of T1SS AFK63_RS13335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AFK63_RS13340 PF00873 AcrB/AcrD/AcrF family AFK63_RS13345 PF10757 Biofilm formation regulator YbaJ AFK63_RS13350 PF05321 Haemolysin expression modulating protein AFK63_RS13355 PF14602 Hexapeptide repeat of succinyl-transferase AFK63_RS13355 PF12464 Maltose acetyltransferase AFK63_RS13360 PF10777 Inner membrane protein YlaC AFK63_RS13365 PF00444 Ribosomal protein L36 AFK63_RS13370 PF01197 Ribosomal protein L31 AFK63_RS13375 PF02203 Tar ligand binding domain homologue AFK63_RS13375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFK63_RS13375 PF00672 HAMP domain AFK63_RS13385 PF03180 NLPA lipoprotein AFK63_RS13390 PF09383 NIL domain AFK63_RS13390 PF00005 ABC transporter AFK63_RS13395 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS13400 PF12792 CSS motif domain associated with EAL AFK63_RS13400 PF00563 EAL domain AFK63_RS13405 PF00583 Acetyltransferase (GNAT) family AFK63_RS13405 PF00814 Glycoprotease family AFK63_RS13415 PF00155 Aminotransferase class I and II AFK63_RS13430 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AFK63_RS13435 PF09619 Type III secretion system lipoprotein chaperone (YscW) AFK63_RS13445 PF00909 Ammonium Transporter Family AFK63_RS13450 PF00543 Nitrogen regulatory protein P-II AFK63_RS13455 PF00664 ABC transporter transmembrane region AFK63_RS13455 PF00005 ABC transporter AFK63_RS13460 PF00005 ABC transporter AFK63_RS13460 PF00664 ABC transporter transmembrane region AFK63_RS13465 PF13404 AsnC-type helix-turn-helix domain AFK63_RS13465 PF01037 Lrp/AsnC ligand binding domain AFK63_RS13500 PF12793 Sugar transport-related sRNA regulator N-term AFK63_RS13500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AFK63_RS13505 PF06508 Queuosine biosynthesis protein QueC AFK63_RS13510 PF00753 Metallo-beta-lactamase superfamily AFK63_RS13525 PF13145 PPIC-type PPIASE domain AFK63_RS13530 PF00216 Bacterial DNA-binding protein AFK63_RS13535 PF00004 ATPase family associated with various cellular activities (AAA) AFK63_RS13535 PF02190 ATP-dependent protease La (LON) substrate-binding domain AFK63_RS13535 PF05362 Lon protease (S16) C-terminal proteolytic domain AFK63_RS13540 PF10431 C-terminal, D2-small domain, of ClpB protein AFK63_RS13540 PF07724 AAA domain (Cdc48 subfamily) AFK63_RS13540 PF06689 ClpX C4-type zinc finger AFK63_RS13545 PF00574 Clp protease AFK63_RS13550 PF05697 Bacterial trigger factor protein (TF) AFK63_RS13550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AFK63_RS13550 PF05698 Bacterial trigger factor protein (TF) C-terminus AFK63_RS13555 PF01722 BolA-like protein AFK63_RS13560 PF03923 Uncharacterized lipoprotein AFK63_RS13560 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AFK63_RS13565 PF07690 Major Facilitator Superfamily AFK63_RS13575 PF00012 Hsp70 protein AFK63_RS13580 PF06481 COX Aromatic Rich Motif AFK63_RS13580 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AFK63_RS13585 PF00115 Cytochrome C and Quinol oxidase polypeptide I AFK63_RS13590 PF00510 Cytochrome c oxidase subunit III AFK63_RS13595 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AFK63_RS13600 PF01040 UbiA prenyltransferase family AFK63_RS13605 PF07690 Major Facilitator Superfamily AFK63_RS13610 PF04461 Protein of unknown function (DUF520) AFK63_RS13615 PF02558 Ketopantoate reductase PanE/ApbA AFK63_RS13615 PF08546 Ketopantoate reductase PanE/ApbA C terminal AFK63_RS13620 PF01965 DJ-1/PfpI family AFK63_RS13625 PF02926 THUMP domain AFK63_RS13625 PF02568 Thiamine biosynthesis protein (ThiI) AFK63_RS13630 PF02609 Exonuclease VII small subunit AFK63_RS13635 PF00348 Polyprenyl synthetase AFK63_RS13640 PF02780 Transketolase, C-terminal domain AFK63_RS13640 PF02779 Transketolase, pyrimidine binding domain AFK63_RS13640 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AFK63_RS13645 PF00248 Aldo/keto reductase family AFK63_RS13650 PF04608 Phosphatidylglycerophosphatase A AFK63_RS13655 PF02769 AIR synthase related protein, C-terminal domain AFK63_RS13655 PF00586 AIR synthase related protein, N-terminal domain AFK63_RS13660 PF01029 NusB family AFK63_RS13665 PF00885 6,7-dimethyl-8-ribityllumazine synthase AFK63_RS13670 PF01872 RibD C-terminal domain AFK63_RS13670 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AFK63_RS13675 PF03477 ATP cone domain AFK63_RS13680 PF11622 Protein of unknown function (DUF3251) AFK63_RS13685 PF03502 Nucleoside-specific channel-forming protein, Tsx AFK63_RS13690 PF02355 Protein export membrane protein AFK63_RS13690 PF07549 SecD/SecF GG Motif AFK63_RS13695 PF13721 SecD export protein N-terminal TM region AFK63_RS13695 PF07549 SecD/SecF GG Motif AFK63_RS13695 PF02355 Protein export membrane protein AFK63_RS13700 PF02699 Preprotein translocase subunit AFK63_RS13705 PF01702 Queuine tRNA-ribosyltransferase AFK63_RS13710 PF02547 Queuosine biosynthesis protein AFK63_RS13715 PF04336 Acyl carrier protein phosphodiesterase AFK63_RS13730 PF02903 Alpha amylase, N-terminal ig-like domain AFK63_RS13730 PF00128 Alpha amylase, catalytic domain AFK63_RS13735 PF00324 Amino acid permease AFK63_RS13740 PF05525 Branched-chain amino acid transport protein AFK63_RS13745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS13745 PF00512 His Kinase A (phospho-acceptor) domain AFK63_RS13745 PF00989 PAS fold AFK63_RS13745 PF11808 Phosphate regulon sensor protein PhoR AFK63_RS13750 PF00486 Transcriptional regulatory protein, C terminal AFK63_RS13750 PF00072 Response regulator receiver domain AFK63_RS13755 PF00149 Calcineurin-like phosphoesterase AFK63_RS13755 PF12320 Type 5 capsule protein repressor C-terminal domain AFK63_RS13760 PF13476 AAA domain AFK63_RS13765 PF00480 ROK family AFK63_RS13770 PF04381 Putative exonuclease, RdgC AFK63_RS13775 PF06865 Pyrimidine/purine nucleoside phosphorylase AFK63_RS13780 PF07302 AroM protein AFK63_RS13785 PF16362 YaiA protein AFK63_RS13790 PF01202 Shikimate kinase AFK63_RS13795 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) AFK63_RS13800 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AFK63_RS13805 PF04239 Protein of unknown function (DUF421) AFK63_RS13815 PF14748 Pyrroline-5-carboxylate reductase dimerisation AFK63_RS13815 PF03807 NADP oxidoreductase coenzyme F420-dependent AFK63_RS13820 PF00083 Sugar (and other) transporter AFK63_RS13825 PF10796 Sigma-S stabilisation anti-adaptor protein AFK63_RS13830 PF07690 Major Facilitator Superfamily AFK63_RS13840 PF01820 D-ala D-ala ligase N-terminus AFK63_RS13840 PF07478 D-ala D-ala ligase C-terminus AFK63_RS13845 PF10953 Protein of unknown function (DUF2754) AFK63_RS13850 PF10954 Protein of unknown function (DUF2755) AFK63_RS13855 PF07759 Protein of unknown function (DUF1615) AFK63_RS13860 PF05992 SbmA/BacA-like family AFK63_RS13870 PF00144 Beta-lactamase AFK63_RS13875 PF15977 Winged helix-turn-helix DNA binding AFK63_RS13880 PF03797 Autotransporter beta-domain AFK63_RS13885 PF02464 Competence-damaged protein AFK63_RS13890 PF00490 Delta-aminolevulinic acid dehydratase AFK63_RS13905 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AFK63_RS13910 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS13915 PF00005 ABC transporter AFK63_RS13920 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AFK63_RS13925 PF02574 Homocysteine S-methyltransferase AFK63_RS13930 PF00324 Amino acid permease AFK63_RS13935 PF01654 Cytochrome bd terminal oxidase subunit I AFK63_RS13945 PF01848 Hok/gef family AFK63_RS13950 PF03969 AFG1-like ATPase AFK63_RS13955 PF13520 Amino acid permease AFK63_RS13960 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AFK63_RS13965 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AFK63_RS13970 PF03279 Bacterial lipid A biosynthesis acyltransferase AFK63_RS13975 PF00455 DeoR C terminal sensor domain AFK63_RS13975 PF08220 DeoR-like helix-turn-helix domain AFK63_RS13980 PF00293 NUDIX domain AFK63_RS13990 PF08668 HDOD domain AFK63_RS13990 PF00563 EAL domain AFK63_RS13995 PF00356 Bacterial regulatory proteins, lacI family AFK63_RS14015 PF00484 Carbonic anhydrase AFK63_RS14020 PF00916 Sulfate permease family AFK63_RS14020 PF01740 STAS domain AFK63_RS14025 PF01594 AI-2E family transporter AFK63_RS14030 PF01011 PQQ enzyme repeat AFK63_RS14030 PF13360 PQQ-like domain AFK63_RS14035 PF03466 LysR substrate binding domain AFK63_RS14035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS14050 PF03466 LysR substrate binding domain AFK63_RS14050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS14055 PF05870 Phenolic acid decarboxylase (PAD) AFK63_RS14060 PF00723 Glycosyl hydrolases family 15 AFK63_RS14065 PF03180 NLPA lipoprotein AFK63_RS14070 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS14075 PF09383 NIL domain AFK63_RS14075 PF00005 ABC transporter AFK63_RS14085 PF00083 Sugar (and other) transporter AFK63_RS14090 PF01261 Xylose isomerase-like TIM barrel AFK63_RS14095 PF01261 Xylose isomerase-like TIM barrel AFK63_RS14100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AFK63_RS14100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFK63_RS14105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AFK63_RS14105 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AFK63_RS14105 PF00205 Thiamine pyrophosphate enzyme, central domain AFK63_RS14110 PF00294 pfkB family carbohydrate kinase AFK63_RS14115 PF01380 SIS domain AFK63_RS14115 PF01418 Helix-turn-helix domain, rpiR family AFK63_RS14120 PF04962 KduI/IolB family AFK63_RS14125 PF00171 Aldehyde dehydrogenase family AFK63_RS14140 PF03949 Malic enzyme, NAD binding domain AFK63_RS14140 PF00390 Malic enzyme, N-terminal domain AFK63_RS14145 PF01306 LacY proton/sugar symporter AFK63_RS14150 PF02929 Beta galactosidase small chain AFK63_RS14150 PF16353 Domain of unknown function(DUF4981) AFK63_RS14150 PF00703 Glycosyl hydrolases family 2 AFK63_RS14150 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AFK63_RS14150 PF02837 Glycosyl hydrolases family 2, sugar binding domain AFK63_RS14155 PF00356 Bacterial regulatory proteins, lacI family AFK63_RS14165 PF00593 TonB dependent receptor AFK63_RS14165 PF07715 TonB-dependent Receptor Plug Domain AFK63_RS14170 PF00561 alpha/beta hydrolase fold AFK63_RS14170 PF00106 short chain dehydrogenase AFK63_RS14175 PF08241 Methyltransferase domain AFK63_RS14180 PF00440 Bacterial regulatory proteins, tetR family AFK63_RS14185 PF01042 Endoribonuclease L-PSP AFK63_RS14190 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AFK63_RS14190 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AFK63_RS14195 PF01965 DJ-1/PfpI family AFK63_RS14195 PF12833 Helix-turn-helix domain AFK63_RS14215 PF01244 Membrane dipeptidase (Peptidase family M19) AFK63_RS14220 PF12706 Beta-lactamase superfamily domain AFK63_RS14225 PF03070 TENA/THI-4/PQQC family AFK63_RS14230 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AFK63_RS14235 PF13186 Iron-sulfur cluster-binding domain AFK63_RS14235 PF04055 Radical SAM superfamily AFK63_RS14240 PF00675 Insulinase (Peptidase family M16) AFK63_RS14245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AFK63_RS14250 PF07687 Peptidase dimerisation domain AFK63_RS14250 PF01546 Peptidase family M20/M25/M40 AFK63_RS14285 PF00171 Aldehyde dehydrogenase family AFK63_RS14290 PF00696 Amino acid kinase family AFK63_RS14290 PF01472 PUA domain AFK63_RS14295 PF00267 Gram-negative porin AFK63_RS14300 PF07417 Sigma factor-binding transcriptional regulator Crl AFK63_RS14305 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) AFK63_RS14310 PF00156 Phosphoribosyl transferase domain AFK63_RS14315 PF01546 Peptidase family M20/M25/M40 AFK63_RS14315 PF07687 Peptidase dimerisation domain AFK63_RS14320 PF11798 IMS family HHH motif AFK63_RS14320 PF11799 impB/mucB/samB family C-terminal domain AFK63_RS14320 PF00817 impB/mucB/samB family AFK63_RS14325 PF03734 L,D-transpeptidase catalytic domain AFK63_RS14330 PF13230 Glutamine amidotransferases class-II AFK63_RS14335 PF13580 SIS domain AFK63_RS14340 PF09317 Domain of unknown function (DUF1974) AFK63_RS14340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AFK63_RS14340 PF02770 Acyl-CoA dehydrogenase, middle domain AFK63_RS14340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AFK63_RS14345 PF00795 Carbon-nitrogen hydrolase AFK63_RS14355 PF00929 Exonuclease AFK63_RS14360 PF00075 RNase H AFK63_RS14365 PF08241 Methyltransferase domain AFK63_RS14370 PF16123 Hydroxyacylglutathione hydrolase C-terminus AFK63_RS14370 PF00753 Metallo-beta-lactamase superfamily AFK63_RS14375 PF01464 Transglycosylase SLT domain AFK63_RS14375 PF01476 LysM domain AFK63_RS14380 PF08241 Methyltransferase domain AFK63_RS14385 PF03372 Endonuclease/Exonuclease/phosphatase family AFK63_RS14390 PF07690 Major Facilitator Superfamily AFK63_RS14395 PF03466 LysR substrate binding domain AFK63_RS14395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS14400 PF00248 Aldo/keto reductase family AFK63_RS14440 PF09383 NIL domain AFK63_RS14440 PF00005 ABC transporter AFK63_RS14445 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS14450 PF03180 NLPA lipoprotein AFK63_RS14455 PF16358 RcsF lipoprotein AFK63_RS14460 PF01980 tRNA-methyltransferase O AFK63_RS14460 PF18389 TrmO C-terminal domain AFK63_RS14465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AFK63_RS14465 PF03129 Anticodon binding domain AFK63_RS14465 PF04073 Aminoacyl-tRNA editing domain AFK63_RS14470 PF04170 NlpE N-terminal domain AFK63_RS14470 PF17185 NlpE C-terminal OB domain AFK63_RS14475 PF00472 RF-1 domain AFK63_RS14480 PF07152 YaeQ protein AFK63_RS14485 PF06786 Uncharacterised protein family (UPF0253) AFK63_RS14490 PF07073 Modulator of Rho-dependent transcription termination (ROF) AFK63_RS14495 PF00034 Cytochrome c AFK63_RS14500 PF01171 PP-loop family AFK63_RS14500 PF11734 TilS substrate C-terminal domain AFK63_RS14500 PF09179 TilS substrate binding domain AFK63_RS14505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AFK63_RS14510 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AFK63_RS14510 PF01276 Orn/Lys/Arg decarboxylase, major domain AFK63_RS14510 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AFK63_RS14520 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AFK63_RS14525 PF07733 Bacterial DNA polymerase III alpha NTPase domain AFK63_RS14525 PF14579 Helix-hairpin-helix motif AFK63_RS14525 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AFK63_RS14525 PF01336 OB-fold nucleic acid binding domain AFK63_RS14525 PF02811 PHP domain AFK63_RS14530 PF01351 Ribonuclease HII AFK63_RS14535 PF02684 Lipid-A-disaccharide synthetase AFK63_RS14540 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AFK63_RS14540 PF00132 Bacterial transferase hexapeptide (six repeats) AFK63_RS14545 PF07977 FabA-like domain AFK63_RS14550 PF00132 Bacterial transferase hexapeptide (six repeats) AFK63_RS14550 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AFK63_RS14555 PF03938 Outer membrane protein (OmpH-like) AFK63_RS14560 PF01103 Surface antigen AFK63_RS14560 PF07244 Surface antigen variable number repeat AFK63_RS14565 PF17820 PDZ domain AFK63_RS14565 PF02163 Peptidase family M50 AFK63_RS14575 PF01255 Putative undecaprenyl diphosphate synthase AFK63_RS14580 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AFK63_RS14580 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AFK63_RS14580 PF13288 DXP reductoisomerase C-terminal domain AFK63_RS14585 PF01765 Ribosome recycling factor AFK63_RS14590 PF00696 Amino acid kinase family AFK63_RS14595 PF00889 Elongation factor TS AFK63_RS14600 PF00318 Ribosomal protein S2 AFK63_RS14605 PF00557 Metallopeptidase family M24 AFK63_RS14610 PF01909 Nucleotidyltransferase domain AFK63_RS14610 PF01966 HD domain AFK63_RS14610 PF08335 GlnD PII-uridylyltransferase AFK63_RS14610 PF01842 ACT domain AFK63_RS14615 PF00132 Bacterial transferase hexapeptide (six repeats) AFK63_RS14615 PF14602 Hexapeptide repeat of succinyl-transferase AFK63_RS14615 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AFK63_RS14620 PF11944 Protein of unknown function (DUF3461) AFK63_RS14625 PF00595 PDZ domain AFK63_RS14630 PF13286 Phosphohydrolase-associated domain AFK63_RS14630 PF01966 HD domain AFK63_RS14635 PF01048 Phosphorylase superfamily AFK63_RS14640 PF01497 Periplasmic binding protein AFK63_RS14645 PF03458 UPF0126 domain AFK63_RS14650 PF01521 Iron-sulphur cluster biosynthesis AFK63_RS14655 PF00654 Voltage gated chloride channel AFK63_RS14660 PF00202 Aminotransferase class-III AFK63_RS14665 PF01032 FecCD transport family AFK63_RS14670 PF01497 Periplasmic binding protein AFK63_RS14675 PF00005 ABC transporter AFK63_RS14680 PF07715 TonB-dependent Receptor Plug Domain AFK63_RS14680 PF00593 TonB dependent receptor AFK63_RS14685 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal AFK63_RS14685 PF00912 Transglycosylase AFK63_RS14685 PF14814 Bifunctional transglycosylase second domain AFK63_RS14685 PF00905 Penicillin binding protein transpeptidase domain AFK63_RS14690 PF00270 DEAD/DEAH box helicase AFK63_RS14690 PF08482 ATP-dependent helicase C-terminal AFK63_RS14690 PF00271 Helicase conserved C-terminal domain AFK63_RS14690 PF04408 Helicase associated domain (HA2) AFK63_RS14695 PF02834 LigT like Phosphoesterase AFK63_RS14700 PF17746 SfsA N-terminal OB domain AFK63_RS14700 PF03749 Sugar fermentation stimulation protein RE domain AFK63_RS14705 PF01258 Prokaryotic dksA/traR C4-type zinc finger AFK63_RS14710 PF00749 tRNA synthetases class I (E and Q), catalytic domain AFK63_RS14715 PF12626 Polymerase A arginine-rich C-terminus AFK63_RS14715 PF12627 Probable RNA and SrmB- binding site of polymerase A AFK63_RS14715 PF01743 Poly A polymerase head domain AFK63_RS14720 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AFK63_RS14725 PF02548 Ketopantoate hydroxymethyltransferase AFK63_RS14730 PF02569 Pantoate-beta-alanine ligase AFK63_RS14735 PF02261 Aspartate decarboxylase AFK63_RS14740 PF01522 Polysaccharide deacetylase AFK63_RS14745 PF03610 PTS system fructose IIA component AFK63_RS14750 PF01061 ABC-2 type transporter AFK63_RS14755 PF00005 ABC transporter AFK63_RS14760 PF00484 Carbonic anhydrase AFK63_RS14765 PF00156 Phosphoribosyl transferase domain AFK63_RS14770 PF01011 PQQ enzyme repeat AFK63_RS14775 PF00394 Multicopper oxidase AFK63_RS14775 PF07732 Multicopper oxidase AFK63_RS14775 PF07731 Multicopper oxidase AFK63_RS14780 PF09618 CRISPR-associated protein (Cas_Csy4) AFK63_RS14785 PF09615 CRISPR-associated protein (Cas_Csy3) AFK63_RS14790 PF09614 CRISPR-associated protein (Cas_Csy2) AFK63_RS14795 PF09611 CRISPR-associated protein (Cas_Csy1) AFK63_RS14805 PF01867 CRISPR associated protein Cas1 AFK63_RS14810 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) AFK63_RS14815 PF17284 Spermidine synthase tetramerisation domain AFK63_RS14820 PF02675 S-adenosylmethionine decarboxylase AFK63_RS14825 PF06062 Uncharacterised protein family (UPF0231) AFK63_RS14835 PF00330 Aconitase family (aconitate hydratase) AFK63_RS14835 PF06434 Aconitate hydratase 2 N-terminus AFK63_RS14835 PF11791 Aconitate B N-terminal domain AFK63_RS14840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFK63_RS14840 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFK63_RS14845 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AFK63_RS14845 PF00364 Biotin-requiring enzyme AFK63_RS14845 PF02817 e3 binding domain AFK63_RS14850 PF17831 Pyruvate dehydrogenase E1 component middle domain AFK63_RS14850 PF00456 Transketolase, thiamine diphosphate binding domain AFK63_RS14855 PF00392 Bacterial regulatory proteins, gntR family AFK63_RS14855 PF07729 FCD domain AFK63_RS14860 PF00324 Amino acid permease AFK63_RS14870 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain AFK63_RS14870 PF04616 Glycosyl hydrolases family 43 AFK63_RS14875 PF17113 Regulatory signalling modulator protein AmpE AFK63_RS14880 PF01510 N-acetylmuramoyl-L-alanine amidase AFK63_RS14885 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AFK63_RS14885 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AFK63_RS14890 PF07963 Prokaryotic N-terminal methylation motif AFK63_RS14895 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AFK63_RS14895 PF00437 Type II/IV secretion system protein AFK63_RS14900 PF00482 Type II secretion system (T2SS), protein F AFK63_RS14905 PF00478 IMP dehydrogenase / GMP reductase domain AFK63_RS14910 PF01121 Dephospho-CoA kinase AFK63_RS14915 PF07072 Cell division protein AFK63_RS14920 PF03884 DNA gyrase inhibitor YacG AFK63_RS14925 PF00293 NUDIX domain AFK63_RS14930 PF02810 SEC-C motif AFK63_RS14930 PF07517 SecA DEAD-like domain AFK63_RS14930 PF01043 SecA preprotein cross-linking domain AFK63_RS14930 PF07516 SecA Wing and Scaffold domain AFK63_RS14935 PF06558 Secretion monitor precursor protein (SecM) AFK63_RS14940 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AFK63_RS14945 PF00091 Tubulin/FtsZ family, GTPase domain AFK63_RS14945 PF12327 FtsZ family, C-terminal domain AFK63_RS14950 PF02491 SHS2 domain inserted in FTSA AFK63_RS14955 PF08478 POTRA domain, FtsQ-type AFK63_RS14955 PF03799 Cell division protein FtsQ AFK63_RS14960 PF07478 D-ala D-ala ligase C-terminus AFK63_RS14960 PF01820 D-ala D-ala ligase N-terminus AFK63_RS14965 PF02875 Mur ligase family, glutamate ligase domain AFK63_RS14965 PF08245 Mur ligase middle domain AFK63_RS14965 PF01225 Mur ligase family, catalytic domain AFK63_RS14970 PF03033 Glycosyltransferase family 28 N-terminal domain AFK63_RS14970 PF04101 Glycosyltransferase family 28 C-terminal domain AFK63_RS14975 PF01098 Cell cycle protein AFK63_RS14980 PF02875 Mur ligase family, glutamate ligase domain AFK63_RS14980 PF08245 Mur ligase middle domain AFK63_RS14985 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AFK63_RS14985 PF00953 Glycosyl transferase family 4 AFK63_RS14990 PF02875 Mur ligase family, glutamate ligase domain AFK63_RS14990 PF01225 Mur ligase family, catalytic domain AFK63_RS14990 PF08245 Mur ligase middle domain AFK63_RS14995 PF01225 Mur ligase family, catalytic domain AFK63_RS14995 PF08245 Mur ligase middle domain AFK63_RS14995 PF02875 Mur ligase family, glutamate ligase domain AFK63_RS15000 PF00905 Penicillin binding protein transpeptidase domain AFK63_RS15000 PF03717 Penicillin-binding Protein dimerisation domain AFK63_RS15005 PF04999 Cell division protein FtsL AFK63_RS15010 PF01795 MraW methylase family AFK63_RS15015 PF02381 MraZ protein, putative antitoxin-like AFK63_RS15020 PF00356 Bacterial regulatory proteins, lacI family AFK63_RS15020 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AFK63_RS15025 PF10369 Small subunit of acetolactate synthase AFK63_RS15030 PF00205 Thiamine pyrophosphate enzyme, central domain AFK63_RS15030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AFK63_RS15030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AFK63_RS15035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS15035 PF03466 LysR substrate binding domain AFK63_RS15040 PF00682 HMGL-like AFK63_RS15040 PF08502 LeuA allosteric (dimerisation) domain AFK63_RS15045 PF00180 Isocitrate/isopropylmalate dehydrogenase AFK63_RS15050 PF00330 Aconitase family (aconitate hydratase) AFK63_RS15055 PF00694 Aconitase C-terminal domain AFK63_RS15060 PF07690 Major Facilitator Superfamily AFK63_RS15065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AFK63_RS15065 PF12793 Sugar transport-related sRNA regulator N-term AFK63_RS15075 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS15080 PF00005 ABC transporter AFK63_RS15085 PF09335 SNARE associated Golgi protein AFK63_RS15090 PF12833 Helix-turn-helix domain AFK63_RS15090 PF02311 AraC-like ligand binding domain AFK63_RS15095 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AFK63_RS15100 PF02610 L-arabinose isomerase AFK63_RS15100 PF11762 L-arabinose isomerase C-terminal domain AFK63_RS15105 PF00596 Class II Aldolase and Adducin N-terminal domain AFK63_RS15110 PF03104 DNA polymerase family B, exonuclease domain AFK63_RS15110 PF00136 DNA polymerase family B AFK63_RS15115 PF18337 RapA N-terminal Tudor like domain AFK63_RS15115 PF00271 Helicase conserved C-terminal domain AFK63_RS15115 PF12137 RNA polymerase recycling family C-terminal AFK63_RS15115 PF00176 SNF2 family N-terminal domain AFK63_RS15115 PF18339 RapA N-terminal Tudor like domain 1 AFK63_RS15120 PF00849 RNA pseudouridylate synthase AFK63_RS15125 PF05099 Tellurite resistance protein TerB AFK63_RS15125 PF00226 DnaJ domain AFK63_RS15130 PF03968 OstA-like protein AFK63_RS15130 PF04453 LPS transport system D AFK63_RS15135 PF09312 SurA N-terminal domain AFK63_RS15135 PF00639 PPIC-type PPIASE domain AFK63_RS15140 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AFK63_RS15145 PF00398 Ribosomal RNA adenine dimethylase AFK63_RS15150 PF04379 ApaG domain AFK63_RS15155 PF00149 Calcineurin-like phosphoesterase AFK63_RS15160 PF00186 Dihydrofolate reductase AFK63_RS15165 PF01810 LysE type translocator AFK63_RS15170 PF02254 TrkA-N domain AFK63_RS15170 PF00999 Sodium/hydrogen exchanger family AFK63_RS15175 PF02525 Flavodoxin-like fold AFK63_RS15180 PF06004 Bacterial protein of unknown function (DUF903) AFK63_RS15190 PF02142 MGS-like domain AFK63_RS15190 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AFK63_RS15190 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AFK63_RS15195 PF00117 Glutamine amidotransferase class-I AFK63_RS15195 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AFK63_RS15200 PF05173 Dihydrodipicolinate reductase, C-terminus AFK63_RS15200 PF01113 Dihydrodipicolinate reductase, N-terminus AFK63_RS15205 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AFK63_RS15205 PF01411 tRNA synthetases class II (A) AFK63_RS15205 PF02272 DHHA1 domain AFK63_RS15210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS15210 PF03466 LysR substrate binding domain AFK63_RS15215 PF01156 Inosine-uridine preferring nucleoside hydrolase AFK63_RS15220 PF02401 LytB protein AFK63_RS15225 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AFK63_RS15230 PF01252 Signal peptidase (SPase) II AFK63_RS15235 PF00133 tRNA synthetases class I (I, L, M and V) AFK63_RS15235 PF06827 Zinc finger found in FPG and IleRS AFK63_RS15235 PF08264 Anticodon-binding domain of tRNA AFK63_RS15240 PF01687 Riboflavin kinase AFK63_RS15240 PF06574 FAD synthetase AFK63_RS15245 PF01649 Ribosomal protein S20 AFK63_RS15250 PF03466 LysR substrate binding domain AFK63_RS15250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS15255 PF06965 Na+/H+ antiporter 1 AFK63_RS15260 PF00704 Glycosyl hydrolases family 18 AFK63_RS15280 PF03466 LysR substrate binding domain AFK63_RS15280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS15285 PF01556 DnaJ C terminal domain AFK63_RS15285 PF00226 DnaJ domain AFK63_RS15285 PF00684 DnaJ central domain AFK63_RS15290 PF00012 Hsp70 protein AFK63_RS15295 PF01184 GPR1/FUN34/yaaH family AFK63_RS15300 PF07690 Major Facilitator Superfamily AFK63_RS15305 PF00994 Probable molybdopterin binding domain AFK63_RS15310 PF00923 Transaldolase/Fructose-6-phosphate aldolase AFK63_RS15315 PF01235 Sodium:alanine symporter family AFK63_RS15320 PF03883 Peroxide stress protein YaaA AFK63_RS15325 PF10697 Protein of unknown function (DUF2502) AFK63_RS15330 PF14821 Threonine synthase N terminus AFK63_RS15330 PF00291 Pyridoxal-phosphate dependent enzyme AFK63_RS15335 PF08544 GHMP kinases C terminal AFK63_RS15335 PF00288 GHMP kinases N terminal domain AFK63_RS15340 PF03447 Homoserine dehydrogenase, NAD binding domain AFK63_RS15340 PF01842 ACT domain AFK63_RS15340 PF13840 ACT domain AFK63_RS15340 PF00742 Homoserine dehydrogenase AFK63_RS15340 PF00696 Amino acid kinase family AFK63_RS15345 PF00588 SpoU rRNA Methylase family AFK63_RS15350 PF00072 Response regulator receiver domain AFK63_RS15350 PF00486 Transcriptional regulatory protein, C terminal AFK63_RS15355 PF06123 Inner membrane protein CreD AFK63_RS15360 PF00512 His Kinase A (phospho-acceptor) domain AFK63_RS15360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS15360 PF00672 HAMP domain AFK63_RS15365 PF00072 Response regulator receiver domain AFK63_RS15365 PF00486 Transcriptional regulatory protein, C terminal AFK63_RS15370 PF05981 CreA protein AFK63_RS15375 PF06445 GyrI-like small molecule binding domain AFK63_RS15375 PF12833 Helix-turn-helix domain AFK63_RS15380 PF00300 Histidine phosphatase superfamily (branch 1) AFK63_RS15385 PF01931 Protein of unknown function DUF84 AFK63_RS15390 PF01371 Trp repressor protein AFK63_RS15395 PF01464 Transglycosylase SLT domain AFK63_RS15395 PF14718 Soluble lytic murein transglycosylase L domain AFK63_RS15400 PF12848 ABC transporter AFK63_RS15400 PF00005 ABC transporter AFK63_RS15410 PF10531 SLBB domain AFK63_RS15410 PF02563 Polysaccharide biosynthesis/export protein AFK63_RS15415 PF05159 Capsule polysaccharide biosynthesis protein AFK63_RS15420 PF05159 Capsule polysaccharide biosynthesis protein AFK63_RS15430 PF01501 Glycosyl transferase family 8 AFK63_RS15430 PF00535 Glycosyl transferase family 2 AFK63_RS15435 PF11380 Stealth protein CR2, conserved region 2 AFK63_RS15435 PF17101 Stealth protein CR1, conserved region 1 AFK63_RS15440 PF00005 ABC transporter AFK63_RS15445 PF01061 ABC-2 type transporter AFK63_RS15450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS15450 PF03466 LysR substrate binding domain AFK63_RS15455 PF00107 Zinc-binding dehydrogenase AFK63_RS15455 PF08240 Alcohol dehydrogenase GroES-like domain AFK63_RS15460 PF13521 AAA domain AFK63_RS15460 PF01381 Helix-turn-helix AFK63_RS15465 PF18073 Rubredoxin metal binding domain AFK63_RS15470 PF18429 Domain of unknown function (DUF5609) AFK63_RS15475 PF10144 Bacterial virulence factor haemolysin AFK63_RS15480 PF03099 Biotin/lipoate A/B protein ligase family AFK63_RS15480 PF10437 Bacterial lipoate protein ligase C-terminus AFK63_RS15485 PF01048 Phosphorylase superfamily AFK63_RS15490 PF01676 Metalloenzyme superfamily AFK63_RS15495 PF02885 Glycosyl transferase family, helical bundle domain AFK63_RS15495 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AFK63_RS15495 PF00591 Glycosyl transferase family, a/b domain AFK63_RS15500 PF01791 DeoC/LacD family aldolase AFK63_RS15505 PF01773 Na+ dependent nucleoside transporter N-terminus AFK63_RS15505 PF07662 Na+ dependent nucleoside transporter C-terminus AFK63_RS15505 PF07670 Nucleoside recognition AFK63_RS15510 PF01026 TatD related DNase AFK63_RS15515 PF01734 Patatin-like phospholipase AFK63_RS15520 PF04972 BON domain AFK63_RS15525 PF00009 Elongation factor Tu GTP binding domain AFK63_RS15525 PF03144 Elongation factor Tu domain 2 AFK63_RS15525 PF16658 Class II release factor RF3, C-terminal domain AFK63_RS15530 PF13419 Haloacid dehalogenase-like hydrolase AFK63_RS15535 PF00583 Acetyltransferase (GNAT) family AFK63_RS15540 PF03603 DNA polymerase III psi subunit AFK63_RS15545 PF08468 Methyltransferase small domain N-terminal AFK63_RS15545 PF05175 Methyltransferase small domain AFK63_RS15565 PF07256 Protein of unknown function (DUF1435) AFK63_RS15570 PF00990 Diguanylate cyclase, GGDEF domain AFK63_RS15575 PF11575 FhuF 2Fe-2S C-terminal domain AFK63_RS15575 PF06276 Ferric iron reductase FhuF-like transporter AFK63_RS15580 PF02378 Phosphotransferase system, EIIC AFK63_RS15585 PF04073 Aminoacyl-tRNA editing domain AFK63_RS15590 PF00196 Bacterial regulatory proteins, luxR family AFK63_RS15595 PF00196 Bacterial regulatory proteins, luxR family AFK63_RS15600 PF06738 Putative threonine/serine exporter AFK63_RS15605 PF12821 Threonine/Serine exporter, ThrE AFK63_RS15610 PF01047 MarR family AFK63_RS15615 PF02566 OsmC-like protein AFK63_RS15620 PF17948 DnaT DNA-binding domain AFK63_RS15625 PF01695 IstB-like ATP binding protein AFK63_RS15630 PF00884 Sulfatase AFK63_RS15635 PF00990 Diguanylate cyclase, GGDEF domain AFK63_RS15640 PF00990 Diguanylate cyclase, GGDEF domain AFK63_RS15640 PF00072 Response regulator receiver domain AFK63_RS15645 PF00672 HAMP domain AFK63_RS15645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFK63_RS15645 PF02203 Tar ligand binding domain homologue AFK63_RS15655 PF00082 Subtilase family AFK63_RS15655 PF12951 Passenger-associated-transport-repeat AFK63_RS15655 PF03797 Autotransporter beta-domain AFK63_RS15660 PF07969 Amidohydrolase family AFK63_RS15670 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AFK63_RS15675 PF00232 Glycosyl hydrolase family 1 AFK63_RS15680 PF02378 Phosphotransferase system, EIIC AFK63_RS15680 PF00367 phosphotransferase system, EIIB AFK63_RS15685 PF00356 Bacterial regulatory proteins, lacI family AFK63_RS15695 PF00529 HlyD membrane-fusion protein of T1SS AFK63_RS15695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AFK63_RS15705 PF00356 Bacterial regulatory proteins, lacI family AFK63_RS15710 PF02264 LamB porin AFK63_RS15715 PF02378 Phosphotransferase system, EIIC AFK63_RS15715 PF00367 phosphotransferase system, EIIB AFK63_RS15720 PF08532 Beta-galactosidase trimerisation domain AFK63_RS15720 PF08533 Beta-galactosidase C-terminal domain AFK63_RS15720 PF02449 Beta-galactosidase AFK63_RS15725 PF07745 Glycosyl hydrolase family 53 AFK63_RS15730 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS15735 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS15740 PF13416 Bacterial extracellular solute-binding protein AFK63_RS15745 PF17912 MalK OB fold domain AFK63_RS15745 PF00005 ABC transporter AFK63_RS15750 PF08845 Toxin SymE, type I toxin-antitoxin system AFK63_RS15755 PF00155 Aminotransferase class I and II AFK63_RS15755 PF00392 Bacterial regulatory proteins, gntR family AFK63_RS15760 PF04286 Protein of unknown function (DUF445) AFK63_RS15770 PF05638 Type VI secretion system effector, Hcp AFK63_RS15780 PF00465 Iron-containing alcohol dehydrogenase AFK63_RS15820 PF00196 Bacterial regulatory proteins, luxR family AFK63_RS15860 PF00107 Zinc-binding dehydrogenase AFK63_RS15860 PF08240 Alcohol dehydrogenase GroES-like domain AFK63_RS15880 PF02734 DAK2 domain AFK63_RS15880 PF02733 Dak1 domain AFK63_RS15890 PF03739 Lipopolysaccharide export system permease LptF/LptG AFK63_RS15895 PF03739 Lipopolysaccharide export system permease LptF/LptG AFK63_RS15900 PF02789 Cytosol aminopeptidase family, N-terminal domain AFK63_RS15900 PF00883 Cytosol aminopeptidase family, catalytic domain AFK63_RS15905 PF04364 DNA polymerase III chi subunit, HolC AFK63_RS15910 PF10458 Valyl tRNA synthetase tRNA binding arm AFK63_RS15910 PF00133 tRNA synthetases class I (I, L, M and V) AFK63_RS15910 PF08264 Anticodon-binding domain of tRNA AFK63_RS15915 PF05987 Bacterial protein of unknown function (DUF898) AFK63_RS15920 PF00583 Acetyltransferase (GNAT) family AFK63_RS15930 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AFK63_RS15935 PF06877 Regulator of ribonuclease activity B AFK63_RS15940 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AFK63_RS15940 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AFK63_RS15945 PF04074 YhcH/YjgK/YiaL AFK63_RS15955 PF00696 Amino acid kinase family AFK63_RS15960 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AFK63_RS15960 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AFK63_RS15965 PF03606 C4-dicarboxylate anaerobic carrier AFK63_RS15970 PF01316 Arginine repressor, DNA binding domain AFK63_RS15970 PF02863 Arginine repressor, C-terminal domain AFK63_RS15975 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AFK63_RS15975 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AFK63_RS15980 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AFK63_RS15980 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AFK63_RS15985 PF01042 Endoribonuclease L-PSP AFK63_RS15990 PF11842 Domain of unknown function (DUF3362) AFK63_RS15990 PF08497 Radical SAM N-terminal AFK63_RS15990 PF04055 Radical SAM superfamily AFK63_RS15995 PF08021 Siderophore-interacting FAD-binding domain AFK63_RS15995 PF04954 Siderophore-interacting protein AFK63_RS16000 PF03551 Transcriptional regulator PadR-like family AFK63_RS16005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFK63_RS16005 PF02203 Tar ligand binding domain homologue AFK63_RS16005 PF00672 HAMP domain AFK63_RS16010 PF08447 PAS fold AFK63_RS16010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFK63_RS16015 PF00990 Diguanylate cyclase, GGDEF domain AFK63_RS16020 PF00202 Aminotransferase class-III AFK63_RS16030 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFK63_RS16030 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AFK63_RS16035 PF05175 Methyltransferase small domain AFK63_RS16040 PF01863 Protein of unknown function DUF45 AFK63_RS16045 PF02698 DUF218 domain AFK63_RS16050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFK63_RS16055 PF03741 Integral membrane protein TerC family AFK63_RS16060 PF00375 Sodium:dicarboxylate symporter family AFK63_RS16065 PF10688 Bacterial inner membrane protein AFK63_RS16070 PF08666 SAF domain AFK63_RS16070 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AFK63_RS16075 PF02614 Glucuronate isomerase AFK63_RS16080 PF07690 Major Facilitator Superfamily AFK63_RS16085 PF07729 FCD domain AFK63_RS16085 PF00392 Bacterial regulatory proteins, gntR family AFK63_RS16090 PF09335 SNARE associated Golgi protein AFK63_RS16095 PF13721 SecD export protein N-terminal TM region AFK63_RS16100 PF06476 Protein of unknown function (DUF1090) AFK63_RS16105 PF05957 Bacterial protein of unknown function (DUF883) AFK63_RS16110 PF07332 Putative Actinobacterial Holin-X, holin superfamily III AFK63_RS16115 PF13997 YqjK-like protein AFK63_RS16120 PF07681 DoxX AFK63_RS16125 PF13409 Glutathione S-transferase, N-terminal domain AFK63_RS16130 PF05656 Protein of unknown function (DUF805) AFK63_RS16135 PF00294 pfkB family carbohydrate kinase AFK63_RS16140 PF11471 Maltoporin periplasmic N-terminal extension AFK63_RS16140 PF02264 LamB porin AFK63_RS16145 PF02378 Phosphotransferase system, EIIC AFK63_RS16145 PF00367 phosphotransferase system, EIIB AFK63_RS16150 PF08244 Glycosyl hydrolases family 32 C terminal AFK63_RS16150 PF00251 Glycosyl hydrolases family 32 N-terminal domain AFK63_RS16155 PF13407 Periplasmic binding protein domain AFK63_RS16155 PF00356 Bacterial regulatory proteins, lacI family AFK63_RS16160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS16160 PF03466 LysR substrate binding domain AFK63_RS16165 PF17954 Quercetinase C-terminal cupin domain AFK63_RS16165 PF02678 Pirin AFK63_RS16175 PF01116 Fructose-bisphosphate aldolase class-II AFK63_RS16180 PF08013 Tagatose 6 phosphate kinase AFK63_RS16185 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AFK63_RS16190 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AFK63_RS16195 PF03611 PTS system sugar-specific permease component AFK63_RS16200 PF08240 Alcohol dehydrogenase GroES-like domain AFK63_RS16200 PF00107 Zinc-binding dehydrogenase AFK63_RS16205 PF08220 DeoR-like helix-turn-helix domain AFK63_RS16210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AFK63_RS16215 PF04348 LppC putative lipoprotein AFK63_RS16220 PF02021 Uncharacterised protein family UPF0102 AFK63_RS16225 PF13580 SIS domain AFK63_RS16230 PF04972 BON domain AFK63_RS16235 PF03773 Predicted permease AFK63_RS16240 PF13460 NAD(P)H-binding AFK63_RS16245 PF01965 DJ-1/PfpI family AFK63_RS16255 PF01541 GIY-YIG catalytic domain AFK63_RS16260 PF13508 Acetyltransferase (GNAT) domain AFK63_RS16265 PF02036 SCP-2 sterol transfer family AFK63_RS16270 PF01136 Peptidase family U32 AFK63_RS16275 PF01136 Peptidase family U32 AFK63_RS16280 PF00296 Luciferase-like monooxygenase AFK63_RS16285 PF03222 Tryptophan/tyrosine permease family AFK63_RS16290 PF01212 Beta-eliminating lyase AFK63_RS16295 PF12343 Cold shock protein DEAD box A AFK63_RS16295 PF03880 DbpA RNA binding domain AFK63_RS16295 PF00270 DEAD/DEAH box helicase AFK63_RS16295 PF00271 Helicase conserved C-terminal domain AFK63_RS16300 PF07719 Tetratricopeptide repeat AFK63_RS16300 PF13181 Tetratricopeptide repeat AFK63_RS16305 PF01138 3' exoribonuclease family, domain 1 AFK63_RS16305 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AFK63_RS16305 PF00013 KH domain AFK63_RS16305 PF00575 S1 RNA binding domain AFK63_RS16305 PF03725 3' exoribonuclease family, domain 2 AFK63_RS16310 PF00312 Ribosomal protein S15 AFK63_RS16315 PF16198 tRNA pseudouridylate synthase B C-terminal domain AFK63_RS16315 PF01509 TruB family pseudouridylate synthase (N terminal domain) AFK63_RS16315 PF09157 Pseudouridine synthase II TruB, C-terminal AFK63_RS16320 PF02033 Ribosome-binding factor A AFK63_RS16325 PF04760 Translation initiation factor IF-2, N-terminal region AFK63_RS16325 PF08364 Bacterial translation initiation factor IF-2 associated region AFK63_RS16325 PF11987 Translation-initiation factor 2 AFK63_RS16325 PF00009 Elongation factor Tu GTP binding domain AFK63_RS16330 PF00575 S1 RNA binding domain AFK63_RS16330 PF08529 NusA N-terminal domain AFK63_RS16330 PF13184 NusA-like KH domain AFK63_RS16335 PF02576 RimP N-terminal domain AFK63_RS16335 PF17384 RimP C-terminal SH3 domain AFK63_RS16350 PF03840 Preprotein translocase SecG subunit AFK63_RS16355 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AFK63_RS16355 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AFK63_RS16355 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AFK63_RS16355 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AFK63_RS16360 PF00809 Pterin binding enzyme AFK63_RS16365 PF01434 Peptidase family M41 AFK63_RS16365 PF06480 FtsH Extracellular AFK63_RS16365 PF17862 AAA+ lid domain AFK63_RS16365 PF00004 ATPase family associated with various cellular activities (AAA) AFK63_RS16370 PF01728 FtsJ-like methyltransferase AFK63_RS16375 PF01985 CRS1 / YhbY (CRM) domain AFK63_RS16380 PF01272 Transcription elongation factor, GreA/GreB, C-term AFK63_RS16380 PF03449 Transcription elongation factor, N-terminal AFK63_RS16385 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AFK63_RS16390 PF00072 Response regulator receiver domain AFK63_RS16390 PF00486 Transcriptional regulatory protein, C terminal AFK63_RS16395 PF00512 His Kinase A (phospho-acceptor) domain AFK63_RS16395 PF00672 HAMP domain AFK63_RS16395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS16400 PF01018 GTP1/OBG AFK63_RS16400 PF01926 50S ribosome-binding GTPase AFK63_RS16405 PF00892 EamA-like transporter family AFK63_RS16410 PF01016 Ribosomal L27 protein AFK63_RS16415 PF00829 Ribosomal prokaryotic L21 protein AFK63_RS16420 PF00348 Polyprenyl synthetase AFK63_RS16425 PF13693 Winged helix-turn-helix DNA-binding AFK63_RS16430 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AFK63_RS16435 PF01722 BolA-like protein AFK63_RS16445 PF05494 MlaC protein AFK63_RS16450 PF02470 MlaD protein AFK63_RS16455 PF02405 Permease MlaE AFK63_RS16460 PF00005 ABC transporter AFK63_RS16465 PF01699 Sodium/calcium exchanger protein AFK63_RS16470 PF00571 CBS domain AFK63_RS16470 PF01380 SIS domain AFK63_RS16480 PF06835 Lipopolysaccharide-assembly, LptC-related AFK63_RS16485 PF03968 OstA-like protein AFK63_RS16490 PF00005 ABC transporter AFK63_RS16490 PF12399 Branched-chain amino acid ATP-binding cassette transporter AFK63_RS16495 PF00309 Sigma-54 factor, Activator interacting domain (AID) AFK63_RS16495 PF04963 Sigma-54 factor, core binding domain AFK63_RS16495 PF04552 Sigma-54, DNA binding domain AFK63_RS16500 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AFK63_RS16505 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AFK63_RS16510 PF03668 P-loop ATPase protein family AFK63_RS16515 PF00381 PTS HPr component phosphorylation site AFK63_RS16535 PF00912 Transglycosylase AFK63_RS16545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS16545 PF00512 His Kinase A (phospho-acceptor) domain AFK63_RS16545 PF18415 Histidine kinase receptor ArcB trans-membrane domain AFK63_RS16545 PF01627 Hpt domain AFK63_RS16545 PF00989 PAS fold AFK63_RS16545 PF00072 Response regulator receiver domain AFK63_RS16550 PF16199 Radical_SAM C-terminal domain AFK63_RS16550 PF04055 Radical SAM superfamily AFK63_RS16560 PF01493 GXGXG motif AFK63_RS16560 PF00310 Glutamine amidotransferases class-II AFK63_RS16560 PF04898 Glutamate synthase central domain AFK63_RS16560 PF01645 Conserved region in glutamate synthase AFK63_RS16565 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFK63_RS16565 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AFK63_RS16570 PF03797 Autotransporter beta-domain AFK63_RS16575 PF04386 Stringent starvation protein B AFK63_RS16580 PF00043 Glutathione S-transferase, C-terminal domain AFK63_RS16580 PF02798 Glutathione S-transferase, N-terminal domain AFK63_RS16585 PF00380 Ribosomal protein S9/S16 AFK63_RS16590 PF00572 Ribosomal protein L13 AFK63_RS16595 PF03969 AFG1-like ATPase AFK63_RS16600 PF06295 Protein of unknown function (DUF1043) AFK63_RS16605 PF13180 PDZ domain AFK63_RS16605 PF00595 PDZ domain AFK63_RS16610 PF13180 PDZ domain AFK63_RS16615 PF00056 lactate/malate dehydrogenase, NAD binding domain AFK63_RS16615 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AFK63_RS16620 PF01316 Arginine repressor, DNA binding domain AFK63_RS16620 PF02863 Arginine repressor, C-terminal domain AFK63_RS16625 PF07338 Protein of unknown function (DUF1471) AFK63_RS16630 PF07338 Protein of unknown function (DUF1471) AFK63_RS16635 PF01337 Barstar (barnase inhibitor) AFK63_RS16640 PF00171 Aldehyde dehydrogenase family AFK63_RS16645 PF04632 Fusaric acid resistance protein family AFK63_RS16650 PF13533 Biotin-lipoyl like AFK63_RS16655 PF07869 Protein of unknown function (DUF1656) AFK63_RS16660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS16660 PF03466 LysR substrate binding domain AFK63_RS16665 PF01523 Putative modulator of DNA gyrase AFK63_RS16670 PF13116 Protein of unknown function AFK63_RS16670 PF13502 AsmA-like C-terminal region AFK63_RS16675 PF10150 Ribonuclease E/G family AFK63_RS16675 PF00575 S1 RNA binding domain AFK63_RS16680 PF02545 Maf-like protein AFK63_RS16685 PF04093 rod shape-determining protein MreD AFK63_RS16690 PF04085 rod shape-determining protein MreC AFK63_RS16700 PF00990 Diguanylate cyclase, GGDEF domain AFK63_RS16700 PF17157 Gammaproteobacterial periplasmic sensor domain AFK63_RS16700 PF00563 EAL domain AFK63_RS16705 PF08240 Alcohol dehydrogenase GroES-like domain AFK63_RS16705 PF00107 Zinc-binding dehydrogenase AFK63_RS16710 PF00174 Oxidoreductase molybdopterin binding domain AFK63_RS16715 PF01794 Ferric reductase like transmembrane component AFK63_RS16720 PF01220 Dehydroquinase class II AFK63_RS16725 PF00364 Biotin-requiring enzyme AFK63_RS16730 PF00289 Biotin carboxylase, N-terminal domain AFK63_RS16730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AFK63_RS16730 PF02785 Biotin carboxylase C-terminal domain AFK63_RS16735 PF06196 Protein of unknown function (DUF997) AFK63_RS16740 PF00474 Sodium:solute symporter family AFK63_RS16750 PF00194 Eukaryotic-type carbonic anhydrase AFK63_RS16755 PF01207 Dihydrouridine synthase (Dus) AFK63_RS16760 PF02954 Bacterial regulatory protein, Fis family AFK63_RS16765 PF03707 Bacterial signalling protein N terminal repeat AFK63_RS16765 PF00990 Diguanylate cyclase, GGDEF domain AFK63_RS16765 PF00563 EAL domain AFK63_RS16770 PF08361 MAATS-type transcriptional repressor, C-terminal region AFK63_RS16770 PF00440 Bacterial regulatory proteins, tetR family AFK63_RS16775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AFK63_RS16775 PF00529 HlyD membrane-fusion protein of T1SS AFK63_RS16780 PF00873 AcrB/AcrD/AcrF family AFK63_RS16790 PF00497 Bacterial extracellular solute-binding proteins, family 3 AFK63_RS16795 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS16800 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS16805 PF00005 ABC transporter AFK63_RS16840 PF02142 MGS-like domain AFK63_RS16840 PF01808 AICARFT/IMPCHase bienzyme AFK63_RS16845 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AFK63_RS16845 PF02843 Phosphoribosylglycinamide synthetase, C domain AFK63_RS16845 PF02844 Phosphoribosylglycinamide synthetase, N domain AFK63_RS16850 PF07356 Protein of unknown function (DUF1481) AFK63_RS16855 PF00216 Bacterial DNA-binding protein AFK63_RS16860 PF04222 Protein of unknown function (DUF416) AFK63_RS16865 PF04493 Endonuclease V AFK63_RS16870 PF01208 Uroporphyrinogen decarboxylase (URO-D) AFK63_RS16875 PF00293 NUDIX domain AFK63_RS16875 PF09297 NADH pyrophosphatase zinc ribbon domain AFK63_RS16880 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AFK63_RS16885 PF01964 Radical SAM ThiC family AFK63_RS16885 PF13667 ThiC-associated domain AFK63_RS16890 PF02581 Thiamine monophosphate synthase AFK63_RS16895 PF00899 ThiF family AFK63_RS16900 PF02597 ThiS family AFK63_RS16905 PF05690 Thiazole biosynthesis protein ThiG AFK63_RS16910 PF04055 Radical SAM superfamily AFK63_RS16910 PF06968 Biotin and Thiamin Synthesis associated domain AFK63_RS16915 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AFK63_RS16920 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AFK63_RS16930 PF04998 RNA polymerase Rpb1, domain 5 AFK63_RS16930 PF05000 RNA polymerase Rpb1, domain 4 AFK63_RS16930 PF04997 RNA polymerase Rpb1, domain 1 AFK63_RS16930 PF00623 RNA polymerase Rpb1, domain 2 AFK63_RS16930 PF04983 RNA polymerase Rpb1, domain 3 AFK63_RS16935 PF00562 RNA polymerase Rpb2, domain 6 AFK63_RS16935 PF04563 RNA polymerase beta subunit AFK63_RS16935 PF04565 RNA polymerase Rpb2, domain 3 AFK63_RS16935 PF04560 RNA polymerase Rpb2, domain 7 AFK63_RS16935 PF10385 RNA polymerase beta subunit external 1 domain AFK63_RS16935 PF04561 RNA polymerase Rpb2, domain 2 AFK63_RS16940 PF00542 Ribosomal protein L7/L12 C-terminal domain AFK63_RS16940 PF16320 Ribosomal protein L7/L12 dimerisation domain AFK63_RS16945 PF00466 Ribosomal protein L10 AFK63_RS16950 PF00687 Ribosomal protein L1p/L10e family AFK63_RS16955 PF03946 Ribosomal protein L11, N-terminal domain AFK63_RS16955 PF00298 Ribosomal protein L11, RNA binding domain AFK63_RS16960 PF02357 Transcription termination factor nusG AFK63_RS16960 PF00467 KOW motif AFK63_RS16965 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AFK63_RS16970 PF00009 Elongation factor Tu GTP binding domain AFK63_RS16970 PF03143 Elongation factor Tu C-terminal domain AFK63_RS16970 PF03144 Elongation factor Tu domain 2 AFK63_RS16995 PF00485 Phosphoribulokinase / Uridine kinase family AFK63_RS17000 PF02237 Biotin protein ligase C terminal domain AFK63_RS17000 PF03099 Biotin/lipoate A/B protein ligase family AFK63_RS17000 PF08279 HTH domain AFK63_RS17005 PF01565 FAD binding domain AFK63_RS17005 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AFK63_RS17035 PF12724 Flavodoxin domain AFK63_RS17040 PF02386 Cation transport protein AFK63_RS17045 PF01205 Uncharacterized protein family UPF0029 AFK63_RS17045 PF09186 Domain of unknown function (DUF1949) AFK63_RS17050 PF00557 Metallopeptidase family M24 AFK63_RS17055 PF00378 Enoyl-CoA hydratase/isomerase AFK63_RS17055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AFK63_RS17055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AFK63_RS17060 PF02803 Thiolase, C-terminal domain AFK63_RS17060 PF00108 Thiolase, N-terminal domain AFK63_RS17070 PF00970 Oxidoreductase FAD-binding domain AFK63_RS17070 PF00175 Oxidoreductase NAD-binding domain AFK63_RS17075 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AFK63_RS17080 PF02357 Transcription termination factor nusG AFK63_RS17090 PF01026 TatD related DNase AFK63_RS17095 PF00902 Sec-independent protein translocase protein (TatC) AFK63_RS17105 PF02416 mttA/Hcf106 family AFK63_RS17110 PF03109 ABC1 family AFK63_RS17115 PF02036 SCP-2 sterol transfer family AFK63_RS17120 PF01209 ubiE/COQ5 methyltransferase family AFK63_RS17125 PF02646 RmuC family AFK63_RS17130 PF01048 Phosphorylase superfamily AFK63_RS17135 PF01738 Dienelactone hydrolase family AFK63_RS17140 PF01717 Cobalamin-independent synthase, Catalytic domain AFK63_RS17140 PF08267 Cobalamin-independent synthase, N-terminal domain AFK63_RS17150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS17150 PF03466 LysR substrate binding domain AFK63_RS17155 PF00892 EamA-like transporter family AFK63_RS17165 PF12146 Serine aminopeptidase, S33 AFK63_RS17170 PF01810 LysE type translocator AFK63_RS17175 PF01810 LysE type translocator AFK63_RS17180 PF00570 HRDC domain AFK63_RS17180 PF16124 RecQ zinc-binding AFK63_RS17180 PF09382 RQC domain AFK63_RS17180 PF00270 DEAD/DEAH box helicase AFK63_RS17180 PF00271 Helicase conserved C-terminal domain AFK63_RS17185 PF02253 Phospholipase A1 AFK63_RS17190 PF03061 Thioesterase superfamily AFK63_RS17195 PF00892 EamA-like transporter family AFK63_RS17205 PF10947 Protein of unknown function (DUF2628) AFK63_RS17210 PF01544 CorA-like Mg2+ transporter protein AFK63_RS17215 PF13361 UvrD-like helicase C-terminal domain AFK63_RS17215 PF00580 UvrD/REP helicase N-terminal domain AFK63_RS17220 PF13419 Haloacid dehalogenase-like hydrolase AFK63_RS17225 PF00589 Phage integrase family AFK63_RS17225 PF02899 Phage integrase, N-terminal SAM-like domain AFK63_RS17230 PF04340 Protein of unknown function, DUF484 AFK63_RS17235 PF01678 Diaminopimelate epimerase AFK63_RS17240 PF13627 Prokaryotic lipoprotein-attachment site AFK63_RS17245 PF01491 Frataxin-like domain AFK63_RS17250 PF01295 Adenylate cyclase, class-I AFK63_RS17250 PF12633 Adenylate cyclase NT domain AFK63_RS17255 PF03900 Porphobilinogen deaminase, C-terminal domain AFK63_RS17255 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AFK63_RS17260 PF02602 Uroporphyrinogen-III synthase HemD AFK63_RS17265 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AFK63_RS17270 PF07219 HemY protein N-terminus AFK63_RS17270 PF07719 Tetratricopeptide repeat AFK63_RS17300 PF00324 Amino acid permease AFK63_RS17305 PF03808 Glycosyl transferase WecB/TagA/CpsF family AFK63_RS17310 PF06899 WzyE protein, O-antigen assembly polymerase AFK63_RS17315 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 AFK63_RS17320 PF01943 Polysaccharide biosynthesis protein AFK63_RS17325 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AFK63_RS17335 PF00483 Nucleotidyl transferase AFK63_RS17340 PF16363 GDP-mannose 4,6 dehydratase AFK63_RS17345 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AFK63_RS17345 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AFK63_RS17345 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AFK63_RS17350 PF02350 UDP-N-acetylglucosamine 2-epimerase AFK63_RS17355 PF02706 Chain length determinant protein AFK63_RS17360 PF00953 Glycosyl transferase family 4 AFK63_RS17365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AFK63_RS17365 PF07498 Rho termination factor, N-terminal domain AFK63_RS17365 PF07497 Rho termination factor, RNA-binding domain AFK63_RS17370 PF00085 Thioredoxin AFK63_RS17375 PF00270 DEAD/DEAH box helicase AFK63_RS17375 PF00271 Helicase conserved C-terminal domain AFK63_RS17380 PF02541 Ppx/GppA phosphatase family AFK63_RS17385 PF13361 UvrD-like helicase C-terminal domain AFK63_RS17385 PF00580 UvrD/REP helicase N-terminal domain AFK63_RS17395 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AFK63_RS17395 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AFK63_RS17400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS17400 PF03466 LysR substrate binding domain AFK63_RS17405 PF00291 Pyridoxal-phosphate dependent enzyme AFK63_RS17405 PF00585 C-terminal regulatory domain of Threonine dehydratase AFK63_RS17410 PF00920 Dehydratase family AFK63_RS17415 PF01063 Amino-transferase class IV AFK63_RS17425 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AFK63_RS17425 PF00205 Thiamine pyrophosphate enzyme, central domain AFK63_RS17425 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AFK63_RS17430 PF13335 Magnesium chelatase, subunit ChlI C-terminal AFK63_RS17430 PF01078 Magnesium chelatase, subunit ChlI AFK63_RS17435 PF04219 Protein of unknown function, DUF AFK63_RS17440 PF03466 LysR substrate binding domain AFK63_RS17440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS17480 PF01177 Asp/Glu/Hydantoin racemase AFK63_RS17485 PF07715 TonB-dependent Receptor Plug Domain AFK63_RS17485 PF00593 TonB dependent receptor AFK63_RS17490 PF05958 tRNA (Uracil-5-)-methyltransferase AFK63_RS17495 PF07226 Protein of unknown function (DUF1422) AFK63_RS17500 PF00440 Bacterial regulatory proteins, tetR family AFK63_RS17505 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFK63_RS17505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFK63_RS17510 PF03466 LysR substrate binding domain AFK63_RS17510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS17515 PF14698 Argininosuccinate lyase C-terminal AFK63_RS17515 PF00206 Lyase AFK63_RS17520 PF00764 Arginosuccinate synthase AFK63_RS17525 PF00696 Amino acid kinase family AFK63_RS17530 PF02774 Semialdehyde dehydrogenase, dimerisation domain AFK63_RS17530 PF01118 Semialdehyde dehydrogenase, NAD binding domain AFK63_RS17535 PF01546 Peptidase family M20/M25/M40 AFK63_RS17535 PF07687 Peptidase dimerisation domain AFK63_RS17540 PF00311 Phosphoenolpyruvate carboxylase AFK63_RS17545 PF06039 Malate:quinone oxidoreductase (Mqo) AFK63_RS17550 PF13426 PAS domain AFK63_RS17550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AFK63_RS17550 PF08447 PAS fold AFK63_RS17560 PF05860 haemagglutination activity domain AFK63_RS17560 PF04829 Pre-toxin domain with VENN motif AFK63_RS17560 PF13332 Hemagglutinin repeat AFK63_RS17565 PF17287 POTRA domain AFK63_RS17565 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AFK63_RS17565 PF08479 POTRA domain, ShlB-type AFK63_RS17570 PF02219 Methylenetetrahydrofolate reductase AFK63_RS17575 PF03447 Homoserine dehydrogenase, NAD binding domain AFK63_RS17575 PF00696 Amino acid kinase family AFK63_RS17575 PF00742 Homoserine dehydrogenase AFK63_RS17580 PF01053 Cys/Met metabolism PLP-dependent enzyme AFK63_RS17585 PF01340 Met Apo-repressor, MetJ AFK63_RS17590 PF01197 Ribosomal protein L31 AFK63_RS17595 PF00270 DEAD/DEAH box helicase AFK63_RS17595 PF00271 Helicase conserved C-terminal domain AFK63_RS17595 PF17764 3′ DNA-binding domain (3′BD) AFK63_RS17595 PF18074 Primosomal protein N C-terminal domain AFK63_RS17595 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AFK63_RS17600 PF00356 Bacterial regulatory proteins, lacI family AFK63_RS17605 PF05036 Sporulation related domain AFK63_RS17610 PF00227 Proteasome subunit AFK63_RS17615 PF00004 ATPase family associated with various cellular activities (AAA) AFK63_RS17615 PF10431 C-terminal, D2-small domain, of ClpB protein AFK63_RS17615 PF07724 AAA domain (Cdc48 subfamily) AFK63_RS17620 PF01040 UbiA prenyltransferase family AFK63_RS17625 PF03737 Aldolase/RraA AFK63_RS17630 PF06005 Cell division protein ZapB AFK63_RS17635 PF00230 Major intrinsic protein AFK63_RS17640 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AFK63_RS17640 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AFK63_RS17645 PF10928 Protein of unknown function (DUF2810) AFK63_RS17650 PF02652 L-lactate permease AFK63_RS17655 PF00392 Bacterial regulatory proteins, gntR family AFK63_RS17655 PF07729 FCD domain AFK63_RS17660 PF01070 FMN-dependent dehydrogenase AFK63_RS17665 PF03475 3-alpha domain AFK63_RS17665 PF03473 MOSC domain AFK63_RS17670 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AFK63_RS17670 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AFK63_RS17675 PF06379 L-rhamnose-proton symport protein (RhaT) AFK63_RS17680 PF12833 Helix-turn-helix domain AFK63_RS17680 PF02311 AraC-like ligand binding domain AFK63_RS17685 PF12833 Helix-turn-helix domain AFK63_RS17685 PF02311 AraC-like ligand binding domain AFK63_RS17690 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AFK63_RS17690 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AFK63_RS17695 PF06134 L-rhamnose isomerase (RhaA) AFK63_RS17700 PF00596 Class II Aldolase and Adducin N-terminal domain AFK63_RS17705 PF13407 Periplasmic binding protein domain AFK63_RS17710 PF00005 ABC transporter AFK63_RS17715 PF02653 Branched-chain amino acid transport system / permease component AFK63_RS17720 PF02653 Branched-chain amino acid transport system / permease component AFK63_RS17725 PF00465 Iron-containing alcohol dehydrogenase AFK63_RS17730 PF05336 L-rhamnose mutarotase AFK63_RS17735 PF01306 LacY proton/sugar symporter AFK63_RS17740 PF16874 Glycosyl hydrolase family 36 C-terminal domain AFK63_RS17740 PF16875 Glycosyl hydrolase family 36 N-terminal domain AFK63_RS17745 PF00356 Bacterial regulatory proteins, lacI family AFK63_RS17745 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AFK63_RS17755 PF03591 AzlC protein AFK63_RS17770 PF02634 FdhD/NarQ family AFK63_RS17775 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AFK63_RS17775 PF00384 Molybdopterin oxidoreductase AFK63_RS17775 PF01568 Molydopterin dinucleotide binding domain AFK63_RS17780 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AFK63_RS17780 PF00384 Molybdopterin oxidoreductase AFK63_RS17780 PF01568 Molydopterin dinucleotide binding domain AFK63_RS17785 PF09163 Formate dehydrogenase N, transmembrane AFK63_RS17785 PF13247 4Fe-4S dicluster domain AFK63_RS17790 PF01292 Prokaryotic cytochrome b561 AFK63_RS17795 PF04216 Protein involved in formate dehydrogenase formation AFK63_RS17810 PF07944 Beta-L-arabinofuranosidase, GH127 AFK63_RS17820 PF00480 ROK family AFK63_RS17825 PF00465 Iron-containing alcohol dehydrogenase AFK63_RS17830 PF09107 Elongation factor SelB, winged helix AFK63_RS17830 PF09106 Elongation factor SelB, winged helix AFK63_RS17830 PF03144 Elongation factor Tu domain 2 AFK63_RS17830 PF00009 Elongation factor Tu GTP binding domain AFK63_RS17835 PF03841 L-seryl-tRNA selenium transferase AFK63_RS17835 PF12390 Selenocysteine synthase N terminal AFK63_RS17840 PF00043 Glutathione S-transferase, C-terminal domain AFK63_RS17840 PF13417 Glutathione S-transferase, N-terminal domain AFK63_RS17845 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AFK63_RS17845 PF02378 Phosphotransferase system, EIIC AFK63_RS17845 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AFK63_RS17850 PF01232 Mannitol dehydrogenase Rossmann domain AFK63_RS17850 PF08125 Mannitol dehydrogenase C-terminal domain AFK63_RS17855 PF05068 Mannitol repressor AFK63_RS17860 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AFK63_RS17865 PF00970 Oxidoreductase FAD-binding domain AFK63_RS17865 PF00175 Oxidoreductase NAD-binding domain AFK63_RS17870 PF05656 Protein of unknown function (DUF805) AFK63_RS17875 PF07305 Protein of unknown function (DUF1454) AFK63_RS17880 PF00121 Triosephosphate isomerase AFK63_RS17955 PF04717 Type VI secretion system, phage-baseplate injector AFK63_RS17990 PF05593 RHS Repeat AFK63_RS17990 PF03527 RHS protein AFK63_RS18010 PF04717 Type VI secretion system, phage-baseplate injector AFK63_RS18010 PF06715 Gp5 C-terminal repeat (3 copies) AFK63_RS18045 PF04717 Type VI secretion system, phage-baseplate injector AFK63_RS18045 PF06715 Gp5 C-terminal repeat (3 copies) AFK63_RS18060 PF00069 Protein kinase domain AFK63_RS18065 PF07724 AAA domain (Cdc48 subfamily) AFK63_RS18065 PF10431 C-terminal, D2-small domain, of ClpB protein AFK63_RS18065 PF00004 ATPase family associated with various cellular activities (AAA) AFK63_RS18065 PF17871 AAA lid domain AFK63_RS18075 PF05947 Type VI secretion system, TssF AFK63_RS18080 PF04965 Gene 25-like lysozyme AFK63_RS18115 PF05638 Type VI secretion system effector, Hcp AFK63_RS18135 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AFK63_RS18140 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 AFK63_RS18145 PF06812 ImpA, N-terminal, type VI secretion system AFK63_RS18155 PF14331 ImcF-related N-terminal domain AFK63_RS18155 PF06761 Intracellular multiplication and human macrophage-killing AFK63_RS18155 PF06744 Type VI secretion protein IcmF C-terminal AFK63_RS18160 PF13677 Membrane MotB of proton-channel complex MotA/MotB AFK63_RS18160 PF00691 OmpA family AFK63_RS18165 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AFK63_RS18190 PF07690 Major Facilitator Superfamily AFK63_RS18200 PF02656 Domain of unknown function (DUF202) AFK63_RS18205 PF02656 Domain of unknown function (DUF202) AFK63_RS18215 PF00011 Hsp20/alpha crystallin family AFK63_RS18220 PF00011 Hsp20/alpha crystallin family AFK63_RS18225 PF07119 Protein of unknown function (DUF1375) AFK63_RS18230 PF12566 Protein of unknown function (DUF3748) AFK63_RS18230 PF07676 WD40-like Beta Propeller Repeat AFK63_RS18235 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AFK63_RS18235 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AFK63_RS18240 PF07690 Major Facilitator Superfamily AFK63_RS18245 PF07690 Major Facilitator Superfamily AFK63_RS18250 PF13378 Enolase C-terminal domain-like AFK63_RS18250 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AFK63_RS18255 PF01081 KDPG and KHG aldolase AFK63_RS18260 PF05035 2-keto-3-deoxy-galactonokinase AFK63_RS18265 PF07729 FCD domain AFK63_RS18265 PF00392 Bacterial regulatory proteins, gntR family AFK63_RS18275 PF00986 DNA gyrase B subunit, carboxyl terminus AFK63_RS18275 PF00204 DNA gyrase B AFK63_RS18275 PF01751 Toprim domain AFK63_RS18275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS18275 PF18053 DNA gyrase B subunit insert domain AFK63_RS18280 PF02463 RecF/RecN/SMC N terminal domain AFK63_RS18285 PF00712 DNA polymerase III beta subunit, N-terminal domain AFK63_RS18285 PF02768 DNA polymerase III beta subunit, C-terminal domain AFK63_RS18285 PF02767 DNA polymerase III beta subunit, central domain AFK63_RS18290 PF08299 Bacterial dnaA protein helix-turn-helix AFK63_RS18290 PF00308 Bacterial dnaA protein AFK63_RS18290 PF11638 DnaA N-terminal domain AFK63_RS18295 PF00825 Ribonuclease P AFK63_RS18300 PF14849 YidC periplasmic domain AFK63_RS18300 PF02096 60Kd inner membrane protein AFK63_RS18305 PF01926 50S ribosome-binding GTPase AFK63_RS18305 PF10396 GTP-binding protein TrmE N-terminus AFK63_RS18305 PF12631 MnmE helical domain AFK63_RS18325 PF01266 FAD dependent oxidoreductase AFK63_RS18330 PF00202 Aminotransferase class-III AFK63_RS18335 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AFK63_RS18360 PF01266 FAD dependent oxidoreductase AFK63_RS18360 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AFK63_RS18370 PF13193 AMP-binding enzyme C-terminal domain AFK63_RS18370 PF00668 Condensation domain AFK63_RS18370 PF07993 Male sterility protein AFK63_RS18370 PF00501 AMP-binding enzyme AFK63_RS18370 PF00550 Phosphopantetheine attachment site AFK63_RS18390 PF01588 Putative tRNA binding domain AFK63_RS18390 PF09334 tRNA synthetases class I (M) AFK63_RS18390 PF08264 Anticodon-binding domain of tRNA AFK63_RS18400 PF03591 AzlC protein AFK63_RS18425 PF03358 NADPH-dependent FMN reductase AFK63_RS18430 PF00860 Permease family AFK63_RS18435 PF13419 Haloacid dehalogenase-like hydrolase AFK63_RS18440 PF00756 Putative esterase AFK63_RS18440 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AFK63_RS18445 PF01895 PhoU domain AFK63_RS18450 PF00005 ABC transporter AFK63_RS18455 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS18460 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS18465 PF12849 PBP superfamily domain AFK63_RS18475 PF01380 SIS domain AFK63_RS18480 PF00132 Bacterial transferase hexapeptide (six repeats) AFK63_RS18480 PF12804 MobA-like NTP transferase domain AFK63_RS18485 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AFK63_RS18485 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AFK63_RS18490 PF02874 ATP synthase alpha/beta family, beta-barrel domain AFK63_RS18490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AFK63_RS18495 PF00231 ATP synthase AFK63_RS18500 PF00306 ATP synthase alpha/beta chain, C terminal domain AFK63_RS18500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AFK63_RS18500 PF02874 ATP synthase alpha/beta family, beta-barrel domain AFK63_RS18505 PF00213 ATP synthase delta (OSCP) subunit AFK63_RS18510 PF00430 ATP synthase B/B' CF(0) AFK63_RS18515 PF00137 ATP synthase subunit C AFK63_RS18520 PF00119 ATP synthase A chain AFK63_RS18525 PF03899 ATP synthase I chain AFK63_RS18530 PF02527 rRNA small subunit methyltransferase G AFK63_RS18535 PF13932 GidA associated domain AFK63_RS18535 PF01134 Glucose inhibited division protein A AFK63_RS18540 PF00258 Flavodoxin AFK63_RS18545 PF01037 Lrp/AsnC ligand binding domain AFK63_RS18550 PF03590 Aspartate-ammonia ligase AFK63_RS18555 PF05762 VWA domain containing CoxE-like protein AFK63_RS18560 PF17868 AAA lid domain AFK63_RS18560 PF07728 AAA domain (dynein-related subfamily) AFK63_RS18560 PF12592 Protein of unknown function (DUF3763) AFK63_RS18565 PF02705 K+ potassium transporter AFK63_RS18570 PF05025 RbsD / FucU transport protein family AFK63_RS18575 PF00005 ABC transporter AFK63_RS18580 PF02653 Branched-chain amino acid transport system / permease component AFK63_RS18585 PF13407 Periplasmic binding protein domain AFK63_RS18590 PF00294 pfkB family carbohydrate kinase AFK63_RS18595 PF00356 Bacterial regulatory proteins, lacI family AFK63_RS18600 PF07690 Major Facilitator Superfamily AFK63_RS18605 PF07729 FCD domain AFK63_RS18605 PF00392 Bacterial regulatory proteins, gntR family AFK63_RS18630 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AFK63_RS18635 PF12804 MobA-like NTP transferase domain AFK63_RS18640 PF06288 Protein of unknown function (DUF1040) AFK63_RS18645 PF01636 Phosphotransferase enzyme family AFK63_RS18650 PF01323 DSBA-like thioredoxin domain AFK63_RS18655 PF01553 Acyltransferase AFK63_RS18660 PF00476 DNA polymerase family A AFK63_RS18660 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AFK63_RS18660 PF01367 5'-3' exonuclease, C-terminal SAM fold AFK63_RS18660 PF01612 3'-5' exonuclease AFK63_RS18665 PF01926 50S ribosome-binding GTPase AFK63_RS18670 PF04220 Der GTPase activator (YihI) AFK63_RS18675 PF04055 Radical SAM superfamily AFK63_RS18675 PF06969 HemN C-terminal domain AFK63_RS18680 PF02954 Bacterial regulatory protein, Fis family AFK63_RS18680 PF00072 Response regulator receiver domain AFK63_RS18680 PF00158 Sigma-54 interaction domain AFK63_RS18685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS18685 PF00989 PAS fold AFK63_RS18685 PF00512 His Kinase A (phospho-acceptor) domain AFK63_RS18690 PF03951 Glutamine synthetase, beta-Grasp domain AFK63_RS18690 PF00120 Glutamine synthetase, catalytic domain AFK63_RS18695 PF00009 Elongation factor Tu GTP binding domain AFK63_RS18695 PF03144 Elongation factor Tu domain 2 AFK63_RS18695 PF00679 Elongation factor G C-terminus AFK63_RS18710 PF01055 Glycosyl hydrolases family 31 AFK63_RS18720 PF01791 DeoC/LacD family aldolase AFK63_RS18725 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AFK63_RS18725 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AFK63_RS18730 PF00294 pfkB family carbohydrate kinase AFK63_RS18735 PF08220 DeoR-like helix-turn-helix domain AFK63_RS18735 PF00455 DeoR C terminal sensor domain AFK63_RS18740 PF13419 Haloacid dehalogenase-like hydrolase AFK63_RS18745 PF03631 Virulence factor BrkB AFK63_RS18750 PF02580 D-Tyr-tRNA(Tyr) deacylase AFK63_RS18755 PF09500 Putative thioesterase (yiiD_Cterm) AFK63_RS18755 PF00583 Acetyltransferase (GNAT) family AFK63_RS18760 PF05170 AsmA family AFK63_RS18765 PF00860 Permease family AFK63_RS18775 PF00419 Fimbrial protein AFK63_RS18810 PF02753 Pili assembly chaperone PapD, C-terminal domain AFK63_RS18810 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AFK63_RS18815 PF00271 Helicase conserved C-terminal domain AFK63_RS18815 PF17191 RecG wedge domain AFK63_RS18815 PF00270 DEAD/DEAH box helicase AFK63_RS18820 PF12105 SpoU, rRNA methylase, C-terminal AFK63_RS18820 PF00588 SpoU rRNA Methylase family AFK63_RS18825 PF02824 TGS domain AFK63_RS18825 PF04607 Region found in RelA / SpoT proteins AFK63_RS18825 PF13291 ACT domain AFK63_RS18830 PF01192 RNA polymerase Rpb6 AFK63_RS18835 PF00625 Guanylate kinase AFK63_RS18840 PF03120 NAD-dependent DNA ligase OB-fold domain AFK63_RS18840 PF01653 NAD-dependent DNA ligase adenylation domain AFK63_RS18845 PF03458 UPF0126 domain AFK63_RS18850 PF08340 Domain of unknown function (DUF1732) AFK63_RS18850 PF03755 YicC-like family, N-terminal region AFK63_RS18855 PF03725 3' exoribonuclease family, domain 2 AFK63_RS18855 PF01138 3' exoribonuclease family, domain 1 AFK63_RS18860 PF00156 Phosphoribosyl transferase domain AFK63_RS18865 PF00440 Bacterial regulatory proteins, tetR family AFK63_RS18870 PF00692 dUTPase AFK63_RS18875 PF04127 DNA / pantothenate metabolism flavoprotein AFK63_RS18875 PF02441 Flavoprotein AFK63_RS18880 PF04002 RadC-like JAB domain AFK63_RS18885 PF00830 Ribosomal L28 family AFK63_RS18890 PF00471 Ribosomal protein L33 AFK63_RS18895 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AFK63_RS18895 PF06827 Zinc finger found in FPG and IleRS AFK63_RS18895 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AFK63_RS18900 PF01467 Cytidylyltransferase-like AFK63_RS18905 PF00535 Glycosyl transferase family 2 AFK63_RS18910 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AFK63_RS18920 PF00535 Glycosyl transferase family 2 AFK63_RS18925 PF00534 Glycosyl transferases group 1 AFK63_RS18925 PF13439 Glycosyltransferase Family 4 AFK63_RS18930 PF13439 Glycosyltransferase Family 4 AFK63_RS18930 PF00534 Glycosyl transferases group 1 AFK63_RS18935 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AFK63_RS18940 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AFK63_RS18945 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AFK63_RS18950 PF01370 NAD dependent epimerase/dehydratase family AFK63_RS18955 PF00155 Aminotransferase class I and II AFK63_RS18960 PF08240 Alcohol dehydrogenase GroES-like domain AFK63_RS18960 PF00107 Zinc-binding dehydrogenase AFK63_RS18965 PF00884 Sulfatase AFK63_RS18970 PF04932 O-Antigen ligase AFK63_RS18975 PF00535 Glycosyl transferase family 2 AFK63_RS18985 PF04748 Divergent polysaccharide deacetylase AFK63_RS18990 PF01551 Peptidase family M23 AFK63_RS18995 PF01676 Metalloenzyme superfamily AFK63_RS18995 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AFK63_RS19000 PF00581 Rhodanese-like domain AFK63_RS19005 PF00462 Glutaredoxin AFK63_RS19010 PF02556 Preprotein translocase subunit SecB AFK63_RS19015 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AFK63_RS19015 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AFK63_RS19020 PF06426 Serine acetyltransferase, N-terminal AFK63_RS19020 PF00132 Bacterial transferase hexapeptide (six repeats) AFK63_RS19025 PF00588 SpoU rRNA Methylase family AFK63_RS19030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS19030 PF00672 HAMP domain AFK63_RS19030 PF16527 Two-component sensor protein CpxA, periplasmic domain AFK63_RS19030 PF00512 His Kinase A (phospho-acceptor) domain AFK63_RS19035 PF00072 Response regulator receiver domain AFK63_RS19035 PF00486 Transcriptional regulatory protein, C terminal AFK63_RS19040 PF07813 LTXXQ motif family protein AFK63_RS19045 PF16916 Dimerisation domain of Zinc Transporter AFK63_RS19045 PF01545 Cation efflux family AFK63_RS19050 PF00365 Phosphofructokinase AFK63_RS19060 PF02611 CDP-diacylglycerol pyrophosphatase AFK63_RS19075 PF00576 HIUase/Transthyretin family AFK63_RS19080 PF00486 Transcriptional regulatory protein, C terminal AFK63_RS19080 PF00072 Response regulator receiver domain AFK63_RS19085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AFK63_RS19085 PF00512 His Kinase A (phospho-acceptor) domain AFK63_RS19090 PF02517 CPBP intramembrane metalloprotease AFK63_RS19100 PF08240 Alcohol dehydrogenase GroES-like domain AFK63_RS19100 PF00107 Zinc-binding dehydrogenase AFK63_RS19105 PF07690 Major Facilitator Superfamily AFK63_RS19110 PF03466 LysR substrate binding domain AFK63_RS19110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS19115 PF00535 Glycosyl transferase family 2 AFK63_RS19115 PF13181 Tetratricopeptide repeat AFK63_RS19120 PF10518 TAT (twin-arginine translocation) pathway signal sequence AFK63_RS19120 PF00111 2Fe-2S iron-sulfur cluster binding domain AFK63_RS19120 PF01799 [2Fe-2S] binding domain AFK63_RS19125 PF03450 CO dehydrogenase flavoprotein C-terminal domain AFK63_RS19125 PF00941 FAD binding domain in molybdopterin dehydrogenase AFK63_RS19130 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AFK63_RS19130 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AFK63_RS19135 PF13478 XdhC Rossmann domain AFK63_RS19135 PF02625 XdhC and CoxI family AFK63_RS19140 PF14602 Hexapeptide repeat of succinyl-transferase AFK63_RS19140 PF00132 Bacterial transferase hexapeptide (six repeats) AFK63_RS19140 PF12804 MobA-like NTP transferase domain AFK63_RS19145 PF00248 Aldo/keto reductase family AFK63_RS19175 PF17345 Family of unknown function (DUF5375) AFK63_RS19200 PF04606 Ogr/Delta-like zinc finger AFK63_RS19215 PF00589 Phage integrase family AFK63_RS19215 PF14659 Phage integrase, N-terminal SAM-like domain AFK63_RS19215 PF13356 Arm DNA-binding domain AFK63_RS19230 PF01055 Glycosyl hydrolases family 31 AFK63_RS19230 PF13802 Galactose mutarotase-like AFK63_RS19235 PF00155 Aminotransferase class I and II AFK63_RS19240 PF00128 Alpha amylase, catalytic domain AFK63_RS19245 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AFK63_RS19250 PF12833 Helix-turn-helix domain AFK63_RS19255 PF02653 Branched-chain amino acid transport system / permease component AFK63_RS19260 PF00005 ABC transporter AFK63_RS19265 PF13407 Periplasmic binding protein domain AFK63_RS19275 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AFK63_RS19275 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AFK63_RS19280 PF00857 Isochorismatase family AFK63_RS19290 PF01757 Acyltransferase family AFK63_RS19295 PF13983 YsaB-like lipoprotein AFK63_RS19300 PF02091 Glycyl-tRNA synthetase alpha subunit AFK63_RS19305 PF02092 Glycyl-tRNA synthetase beta subunit AFK63_RS19305 PF05746 DALR anticodon binding domain AFK63_RS19310 PF01381 Helix-turn-helix AFK63_RS19315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AFK63_RS19315 PF02785 Biotin carboxylase C-terminal domain AFK63_RS19315 PF02785 Biotin carboxylase C-terminal domain AFK63_RS19315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AFK63_RS19315 PF00289 Biotin carboxylase, N-terminal domain AFK63_RS19315 PF00364 Biotin-requiring enzyme AFK63_RS19315 PF00364 Biotin-requiring enzyme AFK63_RS19315 PF00289 Biotin carboxylase, N-terminal domain AFK63_RS19330 PF08402 TOBE domain AFK63_RS19330 PF00005 ABC transporter AFK63_RS19335 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS19345 PF11254 Protein of unknown function (DUF3053) AFK63_RS19350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AFK63_RS19350 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AFK63_RS19355 PF07690 Major Facilitator Superfamily AFK63_RS19360 PF00294 pfkB family carbohydrate kinase AFK63_RS19370 PF00356 Bacterial regulatory proteins, lacI family AFK63_RS19375 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AFK63_RS19380 PF00691 OmpA family AFK63_RS19380 PF13488 Glycine zipper AFK63_RS19385 PF00384 Molybdopterin oxidoreductase AFK63_RS19385 PF01568 Molydopterin dinucleotide binding domain AFK63_RS19385 PF18364 Molybdopterin oxidoreductase N-terminal domain AFK63_RS19390 PF00583 Acetyltransferase (GNAT) family AFK63_RS19395 PF03352 Methyladenine glycosylase AFK63_RS19400 PF03797 Autotransporter beta-domain AFK63_RS19405 PF07690 Major Facilitator Superfamily AFK63_RS19410 PF02566 OsmC-like protein AFK63_RS19415 PF00884 Sulfatase AFK63_RS19415 PF08019 Phosphoethanolamine transferase EptA/EptB AFK63_RS19430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AFK63_RS19435 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS19440 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS19440 PF12911 N-terminal TM domain of oligopeptide transport permease C AFK63_RS19445 PF00005 ABC transporter AFK63_RS19445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AFK63_RS19450 PF00005 ABC transporter AFK63_RS19450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AFK63_RS19455 PF11658 Cellulose biosynthesis protein BcsG AFK63_RS19460 PF11120 Cellulose biosynthesis protein BcsF AFK63_RS19465 PF10995 Cellulose biosynthesis GIL AFK63_RS19470 PF10945 Cellulose biosynthesis protein BcsR AFK63_RS19475 PF06564 Cellulose biosynthesis protein BcsQ AFK63_RS19480 PF07238 PilZ domain AFK63_RS19480 PF03552 Cellulose synthase AFK63_RS19480 PF00535 Glycosyl transferase family 2 AFK63_RS19485 PF03170 Bacterial cellulose synthase subunit AFK63_RS19490 PF01270 Glycosyl hydrolases family 8 AFK63_RS19495 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AFK63_RS19500 PF00672 HAMP domain AFK63_RS19500 PF00990 Diguanylate cyclase, GGDEF domain AFK63_RS19500 PF00563 EAL domain AFK63_RS19500 PF17154 Gammaproteobacterial periplasmic sensor domain AFK63_RS19505 PF00375 Sodium:dicarboxylate symporter family AFK63_RS19510 PF00675 Insulinase (Peptidase family M16) AFK63_RS19510 PF05193 Peptidase M16 inactive domain AFK63_RS19515 PF00294 pfkB family carbohydrate kinase AFK63_RS19520 PF00563 EAL domain AFK63_RS19525 PF05170 AsmA family AFK63_RS19530 PF07690 Major Facilitator Superfamily AFK63_RS19530 PF00083 Sugar (and other) transporter AFK63_RS19535 PF03631 Virulence factor BrkB AFK63_RS19540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AFK63_RS19540 PF03466 LysR substrate binding domain AFK63_RS19550 PF04076 Bacterial OB fold (BOF) protein AFK63_RS19570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFK63_RS19570 PF07992 Pyridine nucleotide-disulphide oxidoreductase AFK63_RS19575 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AFK63_RS19580 PF01432 Peptidase family M3 AFK63_RS19585 PF04445 Putative SAM-dependent methyltransferase AFK63_RS19600 PF00582 Universal stress protein family AFK63_RS19605 PF10625 Universal stress protein B (UspB) AFK63_RS19610 PF01384 Phosphate transporter family AFK63_RS19620 PF00982 Glycosyltransferase family 20 AFK63_RS19625 PF00120 Glutamine synthetase, catalytic domain AFK63_RS19630 PF00877 NlpC/P60 family AFK63_RS19635 PF01594 AI-2E family transporter AFK63_RS19640 PF07690 Major Facilitator Superfamily AFK63_RS19645 PF08786 DcrB AFK63_RS19650 PF02592 Putative vitamin uptake transporter AFK63_RS19655 PF01206 Sulfurtransferase TusA AFK63_RS19660 PF03480 Bacterial extracellular solute-binding protein, family 7 AFK63_RS19670 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AFK63_RS19675 PF00403 Heavy-metal-associated domain AFK63_RS19680 PF07947 YhhN family AFK63_RS19690 PF06611 Protein of unknown function (DUF1145) AFK63_RS19700 PF00448 SRP54-type protein, GTPase domain AFK63_RS19700 PF02881 SRP54-type protein, helical bundle domain AFK63_RS19705 PF00005 ABC transporter AFK63_RS19710 PF02687 FtsX-like permease family AFK63_RS19710 PF18075 FtsX extracellular domain AFK63_RS19715 PF04545 Sigma-70, region 4 AFK63_RS19715 PF04542 Sigma-70 region 2 AFK63_RS19715 PF00140 Sigma-70 factor, region 1.2 AFK63_RS19720 PF00155 Aminotransferase class I and II AFK63_RS19720 PF00392 Bacterial regulatory proteins, gntR family AFK63_RS19725 PF00202 Aminotransferase class-III AFK63_RS19735 PF13458 Periplasmic binding protein AFK63_RS19740 PF12568 Acetyltransferase (GNAT) domain, PanZ AFK63_RS19745 PF13458 Periplasmic binding protein AFK63_RS19750 PF02653 Branched-chain amino acid transport system / permease component AFK63_RS19755 PF02653 Branched-chain amino acid transport system / permease component AFK63_RS19755 PF11862 Domain of unknown function (DUF3382) AFK63_RS19760 PF00005 ABC transporter AFK63_RS19760 PF12399 Branched-chain amino acid ATP-binding cassette transporter AFK63_RS19765 PF00005 ABC transporter AFK63_RS19770 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AFK63_RS19780 PF13416 Bacterial extracellular solute-binding protein AFK63_RS19785 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS19790 PF00528 Binding-protein-dependent transport system inner membrane component AFK63_RS19795 PF17912 MalK OB fold domain AFK63_RS19795 PF00005 ABC transporter AFK63_RS19800 PF03009 Glycerophosphoryl diester phosphodiesterase family AFK63_RS19805 PF10956 Protein of unknown function (DUF2756) AFK63_RS19815 PF00583 Acetyltransferase (GNAT) family AFK63_RS19820 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AFK63_RS19820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AFK63_RS19825 PF17954 Quercetinase C-terminal cupin domain AFK63_RS19825 PF02678 Pirin AFK63_RS19830 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AFK63_RS19830 PF00356 Bacterial regulatory proteins, lacI family AFK63_RS19835 PF01202 Shikimate kinase AFK63_RS19840 PF02447 GntP family permease AFK63_RS19845 PF01914 MarC family integral membrane protein AFK63_RS19850 PF02774 Semialdehyde dehydrogenase, dimerisation domain AFK63_RS19850 PF01118 Semialdehyde dehydrogenase, NAD binding domain AFK63_RS19855 PF00128 Alpha amylase, catalytic domain AFK63_RS19855 PF02806 Alpha amylase, C-terminal all-beta domain AFK63_RS19855 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AFK63_RS19860 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AFK63_RS19860 PF18390 Glycogen debranching enzyme C-terminal domain AFK63_RS19860 PF00128 Alpha amylase, catalytic domain AFK63_RS19865 PF00483 Nucleotidyl transferase AFK63_RS19870 PF00534 Glycosyl transferases group 1 AFK63_RS19870 PF08323 Starch synthase catalytic domain AFK63_RS19875 PF00343 Carbohydrate phosphorylase AFK63_RS19885 PF00563 EAL domain AFK63_RS19885 PF00990 Diguanylate cyclase, GGDEF domain AFK63_RS19885 PF01590 GAF domain AFK63_RS19885 PF00360 Phytochrome region AFK63_RS19890 PF01266 FAD dependent oxidoreductase AFK63_RS19890 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AFK63_RS19895 PF00581 Rhodanese-like domain AFK63_RS19900 PF01694 Rhomboid family AFK63_RS19900 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AFK63_RS19905 PF00455 DeoR C terminal sensor domain AFK63_RS19905 PF08220 DeoR-like helix-turn-helix domain AFK63_RS19910 PF17874 MalT-like TPR region AFK63_RS19910 PF00196 Bacterial regulatory proteins, luxR family AFK63_RS19915 PF00343 Carbohydrate phosphorylase