AFK63_RS00010	SM00357	Cold shock protein domain
AFK63_RS00045	SM00899	AFK63_RS00045
AFK63_RS00055	SM00316	Ribosomal protein S1-like RNA-binding domain
AFK63_RS00055	SM00732	Likely ribonuclease with RNase H fold.
AFK63_RS00065	SM00448	cheY-homologous receiver domain
AFK63_RS00065	SM00862	Transcriptional regulatory protein, C terminal
AFK63_RS00070	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS00070	SM00387	Histidine kinase-like ATPases
AFK63_RS00070	SM00388	His Kinase A (phosphoacceptor) domain
AFK63_RS00090	SM00363	S4 RNA-binding domain
AFK63_RS00135	SM00965	Secretin and TonB N terminus short domain
AFK63_RS00175	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AFK63_RS00175	SM00866	AFK63_RS00175
AFK63_RS00250	SM00100	Cyclic nucleotide-monophosphate binding domain
AFK63_RS00250	SM00419	helix_turn_helix, cAMP Regulatory protein
AFK63_RS00300	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS00365	SM00838	Elongation factor G C-terminus
AFK63_RS00365	SM00889	Elongation factor G, domain IV
AFK63_RS00390	SM01403	AFK63_RS00390
AFK63_RS00410	SM01382	AFK63_RS00410
AFK63_RS00410	SM01383	AFK63_RS00410
AFK63_RS00425	SM00322	K homology RNA-binding domain
AFK63_RS00445	SM01374	AFK63_RS00445
AFK63_RS00450	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AFK63_RS00510	SM00363	S4 RNA-binding domain
AFK63_RS00510	SM01390	AFK63_RS00510
AFK63_RS00515	SM00662	RNA polymerases D
AFK63_RS00530	SM00422	helix_turn_helix, mercury resistance
AFK63_RS00645	SM00346	helix_turn_helix isocitrate lyase regulation
AFK63_RS00650	SM01018	B12 binding domain
AFK63_RS00670	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS00675	SM00244	prohibitin homologues
AFK63_RS00750	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS00775	SM00563	Phosphate acyltransferases
AFK63_RS00825	SM00829	Enoylreductase
AFK63_RS00830	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS00835	SM01005	Alanine racemase, C-terminal domain
AFK63_RS00860	SM00912	haemagglutination activity domain
AFK63_RS00875	SM00267	diguanylate cyclase
AFK63_RS00890	SM00052	Putative diguanylate phosphodiesterase
AFK63_RS00895	SM00342	helix_turn_helix, arabinose operon control protein
AFK63_RS00900	SM00422	helix_turn_helix, mercury resistance
AFK63_RS01050	SM00883	Chaperonin 10 Kd subunit
AFK63_RS01070	SM00841	Elongation factor P, C-terminal
AFK63_RS01070	SM01185	AFK63_RS01070
AFK63_RS01080	SM00421	helix_turn_helix, Lux Regulon
AFK63_RS01135	SM00479	AFK63_RS01135
AFK63_RS01170	SM00646	AFK63_RS01170
AFK63_RS01175	SM00853	MutL C terminal dimerisation domain
AFK63_RS01175	SM01340	AFK63_RS01175
AFK63_RS01195	SM00244	prohibitin homologues
AFK63_RS01200	SM00244	prohibitin homologues
AFK63_RS01210	SM00788	Adenylosuccinate synthetase
AFK63_RS01220	SM00316	Ribosomal protein S1-like RNA-binding domain
AFK63_RS01220	SM00357	Cold shock protein domain
AFK63_RS01220	SM00955	AFK63_RS01220
AFK63_RS01225	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AFK63_RS01250	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AFK63_RS01250	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS01310	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AFK63_RS01310	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS01310	SM00319	Homologues of the ligand binding domain of Tar
AFK63_RS01325	SM00342	helix_turn_helix, arabinose operon control protein
AFK63_RS01365	SM01091	Transporter associated domain
AFK63_RS01440	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AFK63_RS01440	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS01455	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS01470	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AFK63_RS01470	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS01570	SM00642	Alpha-amylase domain
AFK63_RS01580	SM00354	helix_turn _helix lactose operon repressor
AFK63_RS01625	SM00342	helix_turn_helix, arabinose operon control protein
AFK63_RS01655	SM00420	helix_turn_helix, Deoxyribose operon repressor
AFK63_RS01655	SM01134	AFK63_RS01655
AFK63_RS01710	SM00354	helix_turn _helix lactose operon repressor
AFK63_RS01720	SM00869	Autotransporter beta-domain
AFK63_RS01745	SM00448	cheY-homologous receiver domain
AFK63_RS01750	SM00091	PAS domain
AFK63_RS01750	SM00387	Histidine kinase-like ATPases
AFK63_RS01765	SM00764	Citrate lyase ligase C-terminal domain
AFK63_RS01805	SM00478	endonuclease III
AFK63_RS01805	SM00525	AFK63_RS01805
AFK63_RS01840	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AFK63_RS01855	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AFK63_RS01855	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS01855	SM01358	AFK63_RS01855
AFK63_RS01885	SM01240	AFK63_RS01885
AFK63_RS01905	SM00986	Uracil DNA glycosylase superfamily
AFK63_RS01905	SM00987	UreE urease accessory protein, C-terminal domain 
AFK63_RS01920	SM00400	zinc finger
AFK63_RS01920	SM00493	AFK63_RS01920
AFK63_RS01920	SM00766	DNA primase DnaG DnaB-binding
AFK63_RS01935	SM01207	AFK63_RS01935
AFK63_RS01940	SM00905	Dihydroneopterin aldolase
AFK63_RS01950	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AFK63_RS01955	SM00287	Bacterial SH3 domain homologues
AFK63_RS01960	SM01118	AFK63_RS01960
AFK63_RS02030	SM00387	Histidine kinase-like ATPases
AFK63_RS02030	SM00433	TopoisomeraseII
AFK63_RS02070	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AFK63_RS02095	SM00434	DNA Topoisomerase IV
AFK63_RS02100	SM00563	Phosphate acyltransferases
AFK63_RS02110	SM00729	Elongator protein 3, MiaB family, Radical SAM
AFK63_RS02120	SM01152	AFK63_RS02120
AFK63_RS02135	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS02145	SM00346	helix_turn_helix isocitrate lyase regulation
AFK63_RS02150	SM00732	Likely ribonuclease with RNase H fold.
AFK63_RS02175	SM00731	SprT homologues.
AFK63_RS02210	SM00861	Transketolase, pyrimidine binding domain
AFK63_RS02220	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AFK63_RS02280	SM01011	Aminopeptidase P, N-terminal domain
AFK63_RS02325	SM01022	AFK63_RS02325
AFK63_RS02370	SM00937	AFK63_RS02370
AFK63_RS02380	SM00257	Lysin motif
AFK63_RS02440	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS02480	SM00354	helix_turn _helix lactose operon repressor
AFK63_RS02500	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AFK63_RS02500	SM00895	AFK63_RS02500
AFK63_RS02510	SM00354	helix_turn _helix lactose operon repressor
AFK63_RS02515	SM00563	Phosphate acyltransferases
AFK63_RS02540	SM00927	DNA mismatch repair enzyme MutH
AFK63_RS02550	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AFK63_RS02595	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS02605	SM00646	AFK63_RS02605
AFK63_RS02620	SM00925	MltA specific insert domain
AFK63_RS02660	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AFK63_RS02660	SM00475	5'-3' exonuclease
AFK63_RS02705	SM00073	Histidine Phosphotransfer domain
AFK63_RS02705	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS02705	SM00387	Histidine kinase-like ATPases
AFK63_RS02705	SM00388	His Kinase A (phosphoacceptor) domain
AFK63_RS02705	SM00448	cheY-homologous receiver domain
AFK63_RS02715	SM00954	Region found in RelA / SpoT proteins
AFK63_RS02730	SM01192	AFK63_RS02730
AFK63_RS02730	SM01193	AFK63_RS02730
AFK63_RS02840	SM00257	Lysin motif
AFK63_RS02865	SM00347	helix_turn_helix multiple antibiotic resistance protein
AFK63_RS02885	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AFK63_RS02885	SM00534	ATPase domain of DNA mismatch repair MUTS family
AFK63_RS02905	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AFK63_RS02905	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS02905	SM00319	Homologues of the ligand binding domain of Tar
AFK63_RS02915	SM00062	Bacterial periplasmic substrate-binding proteins
AFK63_RS02915	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AFK63_RS02925	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS02940	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS02950	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AFK63_RS03005	SM00052	Putative diguanylate phosphodiesterase
AFK63_RS03005	SM00091	PAS domain
AFK63_RS03005	SM00267	diguanylate cyclase
AFK63_RS03020	SM00347	helix_turn_helix multiple antibiotic resistance protein
AFK63_RS03040	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS03095	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AFK63_RS03095	SM00897	FIST N domain
AFK63_RS03095	SM01204	AFK63_RS03095
AFK63_RS03120	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS03165	SM01091	Transporter associated domain
AFK63_RS03175	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS03175	SM00962	SRP54-type protein, GTPase domain
AFK63_RS03175	SM00963	SRP54-type protein, helical bundle domain
AFK63_RS03215	SM00830	Chorismate mutase type II
AFK63_RS03225	SM00830	Chorismate mutase type II
AFK63_RS03245	SM00363	S4 RNA-binding domain
AFK63_RS03255	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS03255	SM01086	C-terminal, D2-small domain, of ClpB protein
AFK63_RS03300	SM00155	Phospholipase D. Active site motifs.
AFK63_RS03305	SM00881	CoA binding domain
AFK63_RS03310	SM01144	AFK63_RS03310
AFK63_RS03320	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AFK63_RS03325	SM00986	Uracil DNA glycosylase superfamily
AFK63_RS03325	SM00987	UreE urease accessory protein, C-terminal domain 
AFK63_RS03335	SM00487	DEAD-like helicases superfamily
AFK63_RS03335	SM00490	helicase superfamily c-terminal domain
AFK63_RS03380	SM00358	Double-stranded RNA binding motif
AFK63_RS03380	SM00535	Ribonuclease III family
AFK63_RS03430	SM00062	Bacterial periplasmic substrate-binding proteins
AFK63_RS03435	SM01211	AFK63_RS03435
AFK63_RS03440	SM00387	Histidine kinase-like ATPases
AFK63_RS03440	SM00388	His Kinase A (phosphoacceptor) domain
AFK63_RS03450	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS03450	SM00448	cheY-homologous receiver domain
AFK63_RS03455	SM00938	Nitrogen regulatory protein P-II
AFK63_RS03470	SM00422	helix_turn_helix, mercury resistance
AFK63_RS03530	SM00271	DnaJ molecular chaperone homology domain
AFK63_RS03575	SM00450	Rhodanese Homology Domain
AFK63_RS03590	SM01359	AFK63_RS03590
AFK63_RS03590	SM01360	AFK63_RS03590
AFK63_RS03600	SM00562	AFK63_RS03600
AFK63_RS03610	SM00530	Helix-turn-helix XRE-family like proteins 
AFK63_RS03630	SM00564	beta-propeller repeat
AFK63_RS03660	SM00116	Domain in cystathionine beta-synthase and other proteins.
AFK63_RS03660	SM01240	AFK63_RS03660
AFK63_RS03705	SM00487	DEAD-like helicases superfamily
AFK63_RS03705	SM00490	helicase superfamily c-terminal domain
AFK63_RS03715	SM00052	Putative diguanylate phosphodiesterase
AFK63_RS03715	SM00267	diguanylate cyclase
AFK63_RS03780	SM01130	AFK63_RS03780
AFK63_RS03835	SM00421	helix_turn_helix, Lux Regulon
AFK63_RS03835	SM00448	cheY-homologous receiver domain
AFK63_RS03860	SM00861	Transketolase, pyrimidine binding domain
AFK63_RS03870	SM00919	Malic enzyme, NAD binding domain
AFK63_RS03870	SM01274	AFK63_RS03870
AFK63_RS03875	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS03935	SM00530	Helix-turn-helix XRE-family like proteins 
AFK63_RS03955	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS03990	SM00646	AFK63_RS03990
AFK63_RS04035	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS04075	SM00771	ZipA, C-terminal domain (FtsZ-binding)
AFK63_RS04080	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AFK63_RS04080	SM00292	breast cancer carboxy-terminal domain
AFK63_RS04080	SM00532	Ligase N family
AFK63_RS04140	SM00052	Putative diguanylate phosphodiesterase
AFK63_RS04140	SM00267	diguanylate cyclase
AFK63_RS04175	SM00448	cheY-homologous receiver domain
AFK63_RS04175	SM00850	LytTr DNA-binding domain
AFK63_RS04180	SM00387	Histidine kinase-like ATPases
AFK63_RS04260	SM00822	AFK63_RS04260
AFK63_RS04270	SM00861	Transketolase, pyrimidine binding domain
AFK63_RS04300	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS04375	SM00463	Small MutS-related domain
AFK63_RS04415	SM00825	Beta-ketoacyl synthase
AFK63_RS04420	SM00869	Autotransporter beta-domain
AFK63_RS04435	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AFK63_RS04480	SM00062	Bacterial periplasmic substrate-binding proteins
AFK63_RS04485	SM00062	Bacterial periplasmic substrate-binding proteins
AFK63_RS04500	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS04505	SM00953	AFK63_RS04505
AFK63_RS04545	SM00342	helix_turn_helix, arabinose operon control protein
AFK63_RS04585	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AFK63_RS04620	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AFK63_RS04625	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AFK63_RS04625	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AFK63_RS04665	SM00849	Metallo-beta-lactamase superfamily
AFK63_RS04700	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AFK63_RS04730	SM00448	cheY-homologous receiver domain
AFK63_RS04730	SM00862	Transcriptional regulatory protein, C terminal
AFK63_RS04735	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS04735	SM00387	Histidine kinase-like ATPases
AFK63_RS04735	SM00388	His Kinase A (phosphoacceptor) domain
AFK63_RS04745	SM00852	Probable molybdopterin binding domain
AFK63_RS04780	SM00434	DNA Topoisomerase IV
AFK63_RS04785	SM00387	Histidine kinase-like ATPases
AFK63_RS04785	SM00388	His Kinase A (phosphoacceptor) domain
AFK63_RS04785	SM00448	cheY-homologous receiver domain
AFK63_RS04790	SM00421	helix_turn_helix, Lux Regulon
AFK63_RS04790	SM00448	cheY-homologous receiver domain
AFK63_RS04795	SM00387	Histidine kinase-like ATPases
AFK63_RS04810	SM00342	helix_turn_helix, arabinose operon control protein
AFK63_RS04820	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS04830	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AFK63_RS04830	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS04835	SM00849	Metallo-beta-lactamase superfamily
AFK63_RS04865	SM00487	DEAD-like helicases superfamily
AFK63_RS04870	SM00342	helix_turn_helix, arabinose operon control protein
AFK63_RS04915	SM00487	DEAD-like helicases superfamily
AFK63_RS04915	SM00490	helicase superfamily c-terminal domain
AFK63_RS04920	SM00363	S4 RNA-binding domain
AFK63_RS04935	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS04955	SM00052	Putative diguanylate phosphodiesterase
AFK63_RS04965	SM00014	Acid phosphatase homologues
AFK63_RS04970	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AFK63_RS04985	SM00841	Elongation factor P, C-terminal
AFK63_RS04985	SM01185	AFK63_RS04985
AFK63_RS05025	SM00518	AP endonuclease family 2
AFK63_RS05065	SM00354	helix_turn _helix lactose operon repressor
AFK63_RS05075	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS05115	SM00849	Metallo-beta-lactamase superfamily
AFK63_RS05150	SM01217	AFK63_RS05150
AFK63_RS05165	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS05175	SM00422	helix_turn_helix, mercury resistance
AFK63_RS05185	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AFK63_RS05190	SM00267	diguanylate cyclase
AFK63_RS05205	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AFK63_RS05210	SM00448	cheY-homologous receiver domain
AFK63_RS05210	SM00850	LytTr DNA-binding domain
AFK63_RS05215	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AFK63_RS05215	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS05225	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS05250	SM01133	AFK63_RS05250
AFK63_RS05255	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AFK63_RS05265	SM00448	cheY-homologous receiver domain
AFK63_RS05265	SM00862	Transcriptional regulatory protein, C terminal
AFK63_RS05270	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS05270	SM00387	Histidine kinase-like ATPases
AFK63_RS05270	SM00388	His Kinase A (phosphoacceptor) domain
AFK63_RS05300	SM00530	Helix-turn-helix XRE-family like proteins 
AFK63_RS05310	SM00478	endonuclease III
AFK63_RS05310	SM01009	AlkA N-terminal domain
AFK63_RS05315	SM00052	Putative diguanylate phosphodiesterase
AFK63_RS05315	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AFK63_RS05315	SM00091	PAS domain
AFK63_RS05315	SM00267	diguanylate cyclase
AFK63_RS05335	SM01091	Transporter associated domain
AFK63_RS05345	SM00226	Low molecular weight phosphatase family
AFK63_RS05500	SM01350	AFK63_RS05500
AFK63_RS05570	SM00479	AFK63_RS05570
AFK63_RS05580	SM00936	Penicillin-binding protein 5, C-terminal domain 
AFK63_RS05585	SM00871	Bacterial transcription activator, effector binding domain
AFK63_RS05625	SM00860	SMI1 / KNR4 family
AFK63_RS05640	SM00052	Putative diguanylate phosphodiesterase
AFK63_RS05640	SM01034	Sensors of blue-light using FAD
AFK63_RS05690	SM00267	diguanylate cyclase
AFK63_RS05735	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AFK63_RS05765	SM00267	diguanylate cyclase
AFK63_RS05785	SM00421	helix_turn_helix, Lux Regulon
AFK63_RS05835	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS05915	SM00028	Tetratricopeptide repeats
AFK63_RS05950	SM00861	Transketolase, pyrimidine binding domain
AFK63_RS05980	SM00062	Bacterial periplasmic substrate-binding proteins
AFK63_RS05980	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AFK63_RS05995	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS06000	SM00421	helix_turn_helix, Lux Regulon
AFK63_RS06010	SM00421	helix_turn_helix, Lux Regulon
AFK63_RS06010	SM00448	cheY-homologous receiver domain
AFK63_RS06015	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AFK63_RS06015	SM00465	GIY-YIG type nucleases (URI domain)
AFK63_RS06060	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AFK63_RS06085	SM00342	helix_turn_helix, arabinose operon control protein
AFK63_RS06115	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS06160	SM00073	Histidine Phosphotransfer domain
AFK63_RS06160	SM00260	Two component signalling adaptor domain
AFK63_RS06160	SM00387	Histidine kinase-like ATPases
AFK63_RS06160	SM01231	AFK63_RS06160
AFK63_RS06165	SM00260	Two component signalling adaptor domain
AFK63_RS06170	SM00972	Spore Coat Protein U domain
AFK63_RS06175	SM00972	Spore Coat Protein U domain
AFK63_RS06190	SM00972	Spore Coat Protein U domain
AFK63_RS06195	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AFK63_RS06195	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS06195	SM00319	Homologues of the ligand binding domain of Tar
AFK63_RS06205	SM00138	Methyltransferase, chemotaxis proteins 
AFK63_RS06210	SM00448	cheY-homologous receiver domain
AFK63_RS06215	SM00448	cheY-homologous receiver domain
AFK63_RS06230	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AFK63_RS06265	SM00836	DALR anticodon binding domain
AFK63_RS06265	SM01016	Arginyl tRNA synthetase N terminal dom
AFK63_RS06280	SM00829	Enoylreductase
AFK63_RS06305	SM00271	DnaJ molecular chaperone homology domain
AFK63_RS06310	SM00257	Lysin motif
AFK63_RS06310	SM00749	bacterial OsmY and nodulation domain
AFK63_RS06360	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AFK63_RS06365	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS06375	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS06385	SM00257	Lysin motif
AFK63_RS06420	SM00470	ParB-like nuclease domain
AFK63_RS06540	SM00849	Metallo-beta-lactamase superfamily
AFK63_RS06560	SM00829	Enoylreductase
AFK63_RS06620	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS06715	SM00479	AFK63_RS06715
AFK63_RS06770	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AFK63_RS06775	SM00945	ProQ/FINO family
AFK63_RS06780	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AFK63_RS06780	SM00245	tail specific protease
AFK63_RS06790	SM00346	helix_turn_helix isocitrate lyase regulation
AFK63_RS06815	SM00357	Cold shock protein domain
AFK63_RS06850	SM01091	Transporter associated domain
AFK63_RS06855	SM00052	Putative diguanylate phosphodiesterase
AFK63_RS06890	SM00849	Metallo-beta-lactamase superfamily
AFK63_RS06925	SM00487	DEAD-like helicases superfamily
AFK63_RS06925	SM00491	AFK63_RS06925
AFK63_RS06945	SM00341	Helicase and RNase D C-terminal
AFK63_RS06945	SM00474	3'-5' exonuclease
AFK63_RS06995	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AFK63_RS07010	SM01005	Alanine racemase, C-terminal domain
AFK63_RS07015	SM01091	Transporter associated domain
AFK63_RS07045	SM00342	helix_turn_helix, arabinose operon control protein
AFK63_RS07095	SM00354	helix_turn _helix lactose operon repressor
AFK63_RS07105	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS07125	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AFK63_RS07180	SM00422	helix_turn_helix, mercury resistance
AFK63_RS07190	SM01400	AFK63_RS07190
AFK63_RS07210	SM00937	AFK63_RS07210
AFK63_RS07255	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AFK63_RS07255	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS07265	SM01012	AFK63_RS07265
AFK63_RS07280	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS07290	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AFK63_RS07305	SM00421	helix_turn_helix, Lux Regulon
AFK63_RS07305	SM00448	cheY-homologous receiver domain
AFK63_RS07310	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS07310	SM00387	Histidine kinase-like ATPases
AFK63_RS07320	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AFK63_RS07345	SM00342	helix_turn_helix, arabinose operon control protein
AFK63_RS07355	SM00530	Helix-turn-helix XRE-family like proteins 
AFK63_RS07385	SM00448	cheY-homologous receiver domain
AFK63_RS07395	SM00984	UDP binding domain
AFK63_RS07405	SM00528	Domain in histone-like proteins of HNS family
AFK63_RS07440	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS07445	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS07460	SM00155	Phospholipase D. Active site motifs.
AFK63_RS07540	SM00481	DNA polymerase alpha chain like domain
AFK63_RS07550	SM00363	S4 RNA-binding domain
AFK63_RS07560	SM00822	AFK63_RS07560
AFK63_RS07575	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AFK63_RS07575	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AFK63_RS07575	SM00493	AFK63_RS07575
AFK63_RS07595	SM00014	Acid phosphatase homologues
AFK63_RS07605	SM00028	Tetratricopeptide repeats
AFK63_RS07610	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AFK63_RS07625	SM00420	helix_turn_helix, Deoxyribose operon repressor
AFK63_RS07625	SM01134	AFK63_RS07625
AFK63_RS07655	SM00052	Putative diguanylate phosphodiesterase
AFK63_RS07655	SM00091	PAS domain
AFK63_RS07655	SM00267	diguanylate cyclase
AFK63_RS07660	SM00357	Cold shock protein domain
AFK63_RS07660	SM00955	AFK63_RS07660
AFK63_RS07675	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS07680	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS07700	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS07725	SM00642	Alpha-amylase domain
AFK63_RS07770	SM00530	Helix-turn-helix XRE-family like proteins 
AFK63_RS07890	SM00635	Bacterial Ig-like domain 2
AFK63_RS07955	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AFK63_RS07975	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AFK63_RS08010	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS08015	SM00347	helix_turn_helix multiple antibiotic resistance protein
AFK63_RS08020	SM00354	helix_turn _helix lactose operon repressor
AFK63_RS08035	SM00091	PAS domain
AFK63_RS08035	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS08045	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AFK63_RS08095	SM00052	Putative diguanylate phosphodiesterase
AFK63_RS08095	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AFK63_RS08140	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS08150	SM00829	Enoylreductase
AFK63_RS08160	SM00890	Domain of unknown function
AFK63_RS08205	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS08205	SM00487	DEAD-like helicases superfamily
AFK63_RS08205	SM00490	helicase superfamily c-terminal domain
AFK63_RS08205	SM00847	Helicase associated domain (HA2)  Add an annotation
AFK63_RS08230	SM00347	helix_turn_helix multiple antibiotic resistance protein
AFK63_RS08295	SM00829	Enoylreductase
AFK63_RS08300	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AFK63_RS08300	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS08300	SM00319	Homologues of the ligand binding domain of Tar
AFK63_RS08320	SM01150	AFK63_RS08320
AFK63_RS08360	SM00530	Helix-turn-helix XRE-family like proteins 
AFK63_RS08385	SM01022	AFK63_RS08385
AFK63_RS08430	SM00116	Domain in cystathionine beta-synthase and other proteins.
AFK63_RS08430	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS08470	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AFK63_RS08500	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AFK63_RS08525	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AFK63_RS08525	SM00895	AFK63_RS08525
AFK63_RS08540	SM00422	helix_turn_helix, mercury resistance
AFK63_RS08570	SM00796	Allophanate hydrolase subunit 1
AFK63_RS08570	SM00797	Allophanate hydrolase subunit 2
AFK63_RS08570	SM00878	Biotin carboxylase C-terminal domain
AFK63_RS08575	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AFK63_RS08575	SM00895	AFK63_RS08575
AFK63_RS08600	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS08620	SM00342	helix_turn_helix, arabinose operon control protein
AFK63_RS08625	SM00347	helix_turn_helix multiple antibiotic resistance protein
AFK63_RS08660	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AFK63_RS08660	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS08660	SM00319	Homologues of the ligand binding domain of Tar
AFK63_RS08675	SM00267	diguanylate cyclase
AFK63_RS08680	SM00267	diguanylate cyclase
AFK63_RS08685	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AFK63_RS08685	SM00267	diguanylate cyclase
AFK63_RS08700	SM00869	Autotransporter beta-domain
AFK63_RS08715	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AFK63_RS08715	SM00091	PAS domain
AFK63_RS08715	SM00387	Histidine kinase-like ATPases
AFK63_RS08715	SM00388	His Kinase A (phosphoacceptor) domain
AFK63_RS08715	SM00448	cheY-homologous receiver domain
AFK63_RS08755	SM00331	Sigma factor PP2C-like phosphatases
AFK63_RS08755	SM00448	cheY-homologous receiver domain
AFK63_RS08770	SM00530	Helix-turn-helix XRE-family like proteins 
AFK63_RS08775	SM00873	B3/4 domain
AFK63_RS08795	SM00422	helix_turn_helix, mercury resistance
AFK63_RS08835	SM00052	Putative diguanylate phosphodiesterase
AFK63_RS08880	SM00342	helix_turn_helix, arabinose operon control protein
AFK63_RS08885	SM00822	AFK63_RS08885
AFK63_RS08905	SM00903	Flavin reductase like domain
AFK63_RS08915	SM00822	AFK63_RS08915
AFK63_RS08920	SM00829	Enoylreductase
AFK63_RS08930	SM00342	helix_turn_helix, arabinose operon control protein
AFK63_RS08985	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS09005	SM00642	Alpha-amylase domain
AFK63_RS09010	SM00822	AFK63_RS09010
AFK63_RS09015	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AFK63_RS09015	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS09015	SM01358	AFK63_RS09015
AFK63_RS09025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AFK63_RS09025	SM00895	AFK63_RS09025
AFK63_RS09055	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS09060	SM00829	Enoylreductase
AFK63_RS09065	SM00530	Helix-turn-helix XRE-family like proteins 
AFK63_RS09125	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AFK63_RS09125	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS09150	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AFK63_RS09205	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS09215	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AFK63_RS09245	SM00813	Alpha-L-arabinofuranosidase C-terminus
AFK63_RS09270	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS09290	SM00463	Small MutS-related domain
AFK63_RS09300	SM00100	Cyclic nucleotide-monophosphate binding domain
AFK63_RS09300	SM00419	helix_turn_helix, cAMP Regulatory protein
AFK63_RS09315	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AFK63_RS09315	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AFK63_RS09335	SM00448	cheY-homologous receiver domain
AFK63_RS09335	SM00862	Transcriptional regulatory protein, C terminal
AFK63_RS09340	SM00822	AFK63_RS09340
AFK63_RS09350	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS09350	SM00387	Histidine kinase-like ATPases
AFK63_RS09350	SM00388	His Kinase A (phosphoacceptor) domain
AFK63_RS09380	SM00354	helix_turn _helix lactose operon repressor
AFK63_RS09440	SM00900	AFK63_RS09440
AFK63_RS09450	SM00478	endonuclease III
AFK63_RS09450	SM00525	AFK63_RS09450
AFK63_RS09470	SM00363	S4 RNA-binding domain
AFK63_RS09495	SM00347	helix_turn_helix multiple antibiotic resistance protein
AFK63_RS09550	SM00479	AFK63_RS09550
AFK63_RS09570	SM00354	helix_turn _helix lactose operon repressor
AFK63_RS09600	SM00354	helix_turn _helix lactose operon repressor
AFK63_RS09640	SM00342	helix_turn_helix, arabinose operon control protein
AFK63_RS09695	SM00849	Metallo-beta-lactamase superfamily
AFK63_RS09730	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AFK63_RS09745	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AFK63_RS09830	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AFK63_RS09830	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS09840	SM01230	AFK63_RS09840
AFK63_RS09850	SM00530	Helix-turn-helix XRE-family like proteins 
AFK63_RS09865	SM00869	Autotransporter beta-domain
AFK63_RS09905	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS09935	SM01217	AFK63_RS09935
AFK63_RS09980	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS09995	SM00411	bacterial (prokaryotic) histone like domain
AFK63_RS10000	SM00873	B3/4 domain
AFK63_RS10000	SM00874	tRNA synthetase B5 domain
AFK63_RS10000	SM00896	Ferredoxin-fold anticodon binding domain
AFK63_RS10025	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AFK63_RS10120	SM01060	AFK63_RS10120
AFK63_RS10140	SM00465	GIY-YIG type nucleases (URI domain)
AFK63_RS10195	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AFK63_RS10195	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AFK63_RS10195	SM00493	AFK63_RS10195
AFK63_RS10215	SM00870	AFK63_RS10215
AFK63_RS10235	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AFK63_RS10250	SM00763	PrkA AAA domain
AFK63_RS10260	SM00052	Putative diguanylate phosphodiesterase
AFK63_RS10300	SM00260	Two component signalling adaptor domain
AFK63_RS10300	SM00448	cheY-homologous receiver domain
AFK63_RS10310	SM00357	Cold shock protein domain
AFK63_RS10400	SM00448	cheY-homologous receiver domain
AFK63_RS10400	SM00862	Transcriptional regulatory protein, C terminal
AFK63_RS10405	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS10405	SM00387	Histidine kinase-like ATPases
AFK63_RS10405	SM00388	His Kinase A (phosphoacceptor) domain
AFK63_RS10470	SM00232	JAB/MPN domain
AFK63_RS10655	SM00530	Helix-turn-helix XRE-family like proteins 
AFK63_RS10690	SM01329	AFK63_RS10690
AFK63_RS10705	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AFK63_RS10725	SM00448	cheY-homologous receiver domain
AFK63_RS10725	SM00862	Transcriptional regulatory protein, C terminal
AFK63_RS10730	SM00387	Histidine kinase-like ATPases
AFK63_RS10730	SM00388	His Kinase A (phosphoacceptor) domain
AFK63_RS10735	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
AFK63_RS10750	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS10785	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS10795	SM00487	DEAD-like helicases superfamily
AFK63_RS10795	SM00490	helicase superfamily c-terminal domain
AFK63_RS10795	SM00982	AFK63_RS10795
AFK63_RS10795	SM01058	CarD-like/TRCF domain
AFK63_RS10800	SM00257	Lysin motif
AFK63_RS10890	SM00825	Beta-ketoacyl synthase
AFK63_RS10900	SM00822	AFK63_RS10900
AFK63_RS10905	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AFK63_RS10940	SM00363	S4 RNA-binding domain
AFK63_RS10945	SM00316	Ribosomal protein S1-like RNA-binding domain
AFK63_RS10970	SM00047	Lysozyme subfamily 2
AFK63_RS11015	SM00858	AFK63_RS11015
AFK63_RS11090	SM00867	YceI-like domain 
AFK63_RS11095	SM00450	Rhodanese Homology Domain
AFK63_RS11130	SM00155	Phospholipase D. Active site motifs.
AFK63_RS11135	SM00506	Appr-1"-p processing enzyme
AFK63_RS11155	SM00481	DNA polymerase alpha chain like domain
AFK63_RS11275	SM00903	Flavin reductase like domain
AFK63_RS11365	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AFK63_RS11370	SM00992	Hemimethylated DNA-binding protein YccV like
AFK63_RS11375	SM00881	CoA binding domain
AFK63_RS11380	SM00851	MGS-like domain
AFK63_RS11445	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS11450	SM00981	AFK63_RS11450
AFK63_RS11475	SM00062	Bacterial periplasmic substrate-binding proteins
AFK63_RS11490	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS11520	SM00849	Metallo-beta-lactamase superfamily
AFK63_RS11570	SM00344	helix_turn_helix ASNC type
AFK63_RS11595	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS11600	SM00849	Metallo-beta-lactamase superfamily
AFK63_RS11605	SM00411	bacterial (prokaryotic) histone like domain
AFK63_RS11610	SM00316	Ribosomal protein S1-like RNA-binding domain
AFK63_RS11670	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS11680	SM00843	AFK63_RS11680
AFK63_RS11685	SM00344	helix_turn_helix ASNC type
AFK63_RS11695	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS11700	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS11710	SM00316	Ribosomal protein S1-like RNA-binding domain
AFK63_RS11715	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS11715	SM01086	C-terminal, D2-small domain, of ClpB protein
AFK63_RS11725	SM00357	Cold shock protein domain
AFK63_RS11730	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS11785	SM00644	AFK63_RS11785
AFK63_RS11800	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS11805	SM00062	Bacterial periplasmic substrate-binding proteins
AFK63_RS11805	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AFK63_RS11820	SM00062	Bacterial periplasmic substrate-binding proteins
AFK63_RS11820	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AFK63_RS11825	SM00342	helix_turn_helix, arabinose operon control protein
AFK63_RS11865	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS11945	SM00014	Acid phosphatase homologues
AFK63_RS11950	SM00420	helix_turn_helix, Deoxyribose operon repressor
AFK63_RS11950	SM01134	AFK63_RS11950
AFK63_RS11955	SM00936	Penicillin-binding protein 5, C-terminal domain 
AFK63_RS11975	SM00857	Resolvase, N terminal domain
AFK63_RS11995	SM00530	Helix-turn-helix XRE-family like proteins 
AFK63_RS12010	SM00857	Resolvase, N terminal domain
AFK63_RS12015	SM00729	Elongator protein 3, MiaB family, Radical SAM
AFK63_RS12035	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS12040	SM00852	Probable molybdopterin binding domain
AFK63_RS12065	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS12095	SM00529	Helix-turn-helix diphteria tox regulatory element
AFK63_RS12120	SM00062	Bacterial periplasmic substrate-binding proteins
AFK63_RS12120	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AFK63_RS12130	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS12145	SM00903	Flavin reductase like domain
AFK63_RS12190	SM00487	DEAD-like helicases superfamily
AFK63_RS12190	SM00488	AFK63_RS12190
AFK63_RS12190	SM00491	AFK63_RS12190
AFK63_RS12195	SM01061	CAT RNA binding domain
AFK63_RS12225	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AFK63_RS12225	SM00866	AFK63_RS12225
AFK63_RS12230	SM00487	DEAD-like helicases superfamily
AFK63_RS12230	SM00490	helicase superfamily c-terminal domain
AFK63_RS12245	SM00155	Phospholipase D. Active site motifs.
AFK63_RS12275	SM00852	Probable molybdopterin binding domain
AFK63_RS12280	SM00729	Elongator protein 3, MiaB family, Radical SAM
AFK63_RS12290	SM00487	DEAD-like helicases superfamily
AFK63_RS12290	SM00490	helicase superfamily c-terminal domain
AFK63_RS12295	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS12315	SM00729	Elongator protein 3, MiaB family, Radical SAM
AFK63_RS12315	SM00876	Biotin and Thiamin Synthesis associated domain
AFK63_RS12350	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS12370	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS12395	SM00855	Phosphoglycerate mutase family
AFK63_RS12505	SM00881	CoA binding domain
AFK63_RS12520	SM00861	Transketolase, pyrimidine binding domain
AFK63_RS12550	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AFK63_RS12550	SM01232	AFK63_RS12550
AFK63_RS12580	SM00797	Allophanate hydrolase subunit 2
AFK63_RS12585	SM00796	Allophanate hydrolase subunit 1
AFK63_RS12625	SM00387	Histidine kinase-like ATPases
AFK63_RS12625	SM00388	His Kinase A (phosphoacceptor) domain
AFK63_RS12630	SM00448	cheY-homologous receiver domain
AFK63_RS12630	SM00862	Transcriptional regulatory protein, C terminal
AFK63_RS12680	SM01081	Putative carbohydrate binding domain
AFK63_RS12770	SM00729	Elongator protein 3, MiaB family, Radical SAM
AFK63_RS12785	SM00116	Domain in cystathionine beta-synthase and other proteins.
AFK63_RS12785	SM01091	Transporter associated domain
AFK63_RS12795	SM00062	Bacterial periplasmic substrate-binding proteins
AFK63_RS12810	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS12875	SM00936	Penicillin-binding protein 5, C-terminal domain 
AFK63_RS12895	SM00729	Elongator protein 3, MiaB family, Radical SAM
AFK63_RS12915	SM00357	Cold shock protein domain
AFK63_RS12940	SM00642	Alpha-amylase domain
AFK63_RS12945	SM00642	Alpha-amylase domain
AFK63_RS12950	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS13010	SM01007	Class II Aldolase and Adducin N-terminal domain
AFK63_RS13025	SM00823	Phosphopantetheine attachment site
AFK63_RS13025	SM00824	Thioesterase
AFK63_RS13030	SM00923	MbtH-like protein
AFK63_RS13060	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AFK63_RS13060	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS13065	SM00450	Rhodanese Homology Domain
AFK63_RS13070	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AFK63_RS13095	SM00822	AFK63_RS13095
AFK63_RS13125	SM00354	helix_turn _helix lactose operon repressor
AFK63_RS13130	SM00840	AFK63_RS13130
AFK63_RS13145	SM01001	AIR carboxylase
AFK63_RS13160	SM00116	Domain in cystathionine beta-synthase and other proteins.
AFK63_RS13170	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS13170	SM00930	AFK63_RS13170
AFK63_RS13185	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS13195	SM00822	AFK63_RS13195
AFK63_RS13205	SM00244	prohibitin homologues
AFK63_RS13225	SM00422	helix_turn_helix, mercury resistance
AFK63_RS13290	SM00387	Histidine kinase-like ATPases
AFK63_RS13295	SM00493	AFK63_RS13295
AFK63_RS13305	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS13355	SM01266	AFK63_RS13355
AFK63_RS13375	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AFK63_RS13375	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS13390	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS13400	SM00052	Putative diguanylate phosphodiesterase
AFK63_RS13415	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AFK63_RS13450	SM00938	Nitrogen regulatory protein P-II
AFK63_RS13455	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS13460	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS13465	SM00344	helix_turn_helix ASNC type
AFK63_RS13510	SM00849	Metallo-beta-lactamase superfamily
AFK63_RS13520	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AFK63_RS13530	SM00411	bacterial (prokaryotic) histone like domain
AFK63_RS13535	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS13535	SM00464	Found in ATP-dependent protease La (LON)
AFK63_RS13540	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS13540	SM00994	ClpX C4-type zinc finger
AFK63_RS13540	SM01086	C-terminal, D2-small domain, of ClpB protein
AFK63_RS13570	SM00271	DnaJ molecular chaperone homology domain
AFK63_RS13625	SM00981	AFK63_RS13625
AFK63_RS13640	SM00861	Transketolase, pyrimidine binding domain
AFK63_RS13700	SM01323	AFK63_RS13700
AFK63_RS13730	SM00642	Alpha-amylase domain
AFK63_RS13745	SM00091	PAS domain
AFK63_RS13745	SM00387	Histidine kinase-like ATPases
AFK63_RS13745	SM00388	His Kinase A (phosphoacceptor) domain
AFK63_RS13750	SM00448	cheY-homologous receiver domain
AFK63_RS13750	SM00862	Transcriptional regulatory protein, C terminal
AFK63_RS13880	SM00869	Autotransporter beta-domain
AFK63_RS13890	SM01004	Delta-aminolevulinic acid dehydratase
AFK63_RS13895	SM00563	Phosphate acyltransferases
AFK63_RS13915	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS13920	SM00062	Bacterial periplasmic substrate-binding proteins
AFK63_RS13975	SM00420	helix_turn_helix, Deoxyribose operon repressor
AFK63_RS13975	SM01134	AFK63_RS13975
AFK63_RS13995	SM00354	helix_turn _helix lactose operon repressor
AFK63_RS14015	SM00947	Carbonic anhydrase
AFK63_RS14030	SM00564	beta-propeller repeat
AFK63_RS14075	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS14075	SM00930	AFK63_RS14075
AFK63_RS14140	SM00919	Malic enzyme, NAD binding domain
AFK63_RS14140	SM01274	AFK63_RS14140
AFK63_RS14150	SM01038	Beta galactosidase small chain
AFK63_RS14155	SM00354	helix_turn _helix lactose operon repressor
AFK63_RS14190	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AFK63_RS14195	SM00342	helix_turn_helix, arabinose operon control protein
AFK63_RS14290	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AFK63_RS14355	SM00479	AFK63_RS14355
AFK63_RS14370	SM00849	Metallo-beta-lactamase superfamily
AFK63_RS14375	SM00257	Lysin motif
AFK63_RS14440	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS14440	SM00930	AFK63_RS14440
AFK63_RS14480	SM01322	AFK63_RS14480
AFK63_RS14500	SM00977	TilS substrate C-terminal domain
AFK63_RS14515	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AFK63_RS14515	SM00495	Chitin-binding domain type 3
AFK63_RS14525	SM00481	DNA polymerase alpha chain like domain
AFK63_RS14555	SM00935	Outer membrane protein (OmpH-like)
AFK63_RS14565	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AFK63_RS14610	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AFK63_RS14625	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AFK63_RS14630	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AFK63_RS14675	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS14690	SM00487	DEAD-like helicases superfamily
AFK63_RS14690	SM00490	helicase superfamily c-terminal domain
AFK63_RS14690	SM00847	Helicase associated domain (HA2)  Add an annotation
AFK63_RS14755	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS14760	SM00947	Carbonic anhydrase
AFK63_RS14770	SM00564	beta-propeller repeat
AFK63_RS14855	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AFK63_RS14855	SM00895	AFK63_RS14855
AFK63_RS14880	SM00644	AFK63_RS14880
AFK63_RS14895	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS14905	SM01240	AFK63_RS14905
AFK63_RS14930	SM00957	SecA DEAD-like domain
AFK63_RS14930	SM00958	SecA preprotein cross-linking domain
AFK63_RS14945	SM00864	Tubulin/FtsZ family, GTPase domain
AFK63_RS14945	SM00865	Tubulin/FtsZ family, C-terminal domain
AFK63_RS14950	SM00842	Cell division protein FtsA
AFK63_RS15020	SM00354	helix_turn _helix lactose operon repressor
AFK63_RS15040	SM00917	LeuA allosteric (dimerisation) domain
AFK63_RS15045	SM01329	AFK63_RS15045
AFK63_RS15080	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS15090	SM00342	helix_turn_helix, arabinose operon control protein
AFK63_RS15105	SM01007	Class II Aldolase and Adducin N-terminal domain
AFK63_RS15110	SM00486	DNA polymerase type-B family
AFK63_RS15115	SM00487	DEAD-like helicases superfamily
AFK63_RS15115	SM00490	helicase superfamily c-terminal domain
AFK63_RS15125	SM00271	DnaJ molecular chaperone homology domain
AFK63_RS15145	SM00650	Ribosomal RNA adenine dimethylases
AFK63_RS15190	SM00851	MGS-like domain
AFK63_RS15190	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AFK63_RS15195	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AFK63_RS15240	SM00904	Riboflavin kinase
AFK63_RS15260	SM00495	Chitin-binding domain type 3
AFK63_RS15260	SM00636	AFK63_RS15260
AFK63_RS15285	SM00271	DnaJ molecular chaperone homology domain
AFK63_RS15305	SM00852	Probable molybdopterin binding domain
AFK63_RS15350	SM00448	cheY-homologous receiver domain
AFK63_RS15350	SM00862	Transcriptional regulatory protein, C terminal
AFK63_RS15360	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS15360	SM00387	Histidine kinase-like ATPases
AFK63_RS15360	SM00388	His Kinase A (phosphoacceptor) domain
AFK63_RS15365	SM00448	cheY-homologous receiver domain
AFK63_RS15365	SM00862	Transcriptional regulatory protein, C terminal
AFK63_RS15375	SM00342	helix_turn_helix, arabinose operon control protein
AFK63_RS15375	SM00871	Bacterial transcription activator, effector binding domain
AFK63_RS15380	SM00855	Phosphoglycerate mutase family
AFK63_RS15400	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS15440	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS15455	SM00829	Enoylreductase
AFK63_RS15460	SM00530	Helix-turn-helix XRE-family like proteins 
AFK63_RS15465	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS15495	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
AFK63_RS15500	SM01133	AFK63_RS15500
AFK63_RS15520	SM00749	bacterial OsmY and nodulation domain
AFK63_RS15570	SM00267	diguanylate cyclase
AFK63_RS15590	SM00421	helix_turn_helix, Lux Regulon
AFK63_RS15595	SM00421	helix_turn_helix, Lux Regulon
AFK63_RS15610	SM00347	helix_turn_helix multiple antibiotic resistance protein
AFK63_RS15625	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS15635	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AFK63_RS15635	SM00267	diguanylate cyclase
AFK63_RS15640	SM00267	diguanylate cyclase
AFK63_RS15640	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS15645	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AFK63_RS15645	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS15645	SM00319	Homologues of the ligand binding domain of Tar
AFK63_RS15655	SM00869	Autotransporter beta-domain
AFK63_RS15685	SM00354	helix_turn _helix lactose operon repressor
AFK63_RS15700	SM00347	helix_turn_helix multiple antibiotic resistance protein
AFK63_RS15705	SM00354	helix_turn _helix lactose operon repressor
AFK63_RS15745	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS15755	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AFK63_RS15810	SM00507	HNH nucleases
AFK63_RS15820	SM00421	helix_turn_helix, Lux Regulon
AFK63_RS15860	SM00829	Enoylreductase
AFK63_RS15880	SM01120	AFK63_RS15880
AFK63_RS15990	SM00729	Elongator protein 3, MiaB family, Radical SAM
AFK63_RS16005	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AFK63_RS16005	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS16010	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AFK63_RS16010	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AFK63_RS16015	SM00267	diguanylate cyclase
AFK63_RS16070	SM00858	AFK63_RS16070
AFK63_RS16085	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AFK63_RS16085	SM00895	AFK63_RS16085
AFK63_RS16150	SM00640	Glycosyl hydrolases family 32
AFK63_RS16155	SM00354	helix_turn _helix lactose operon repressor
AFK63_RS16200	SM00829	Enoylreductase
AFK63_RS16205	SM00420	helix_turn_helix, Deoxyribose operon repressor
AFK63_RS16205	SM01134	AFK63_RS16205
AFK63_RS16230	SM00749	bacterial OsmY and nodulation domain
AFK63_RS16295	SM00487	DEAD-like helicases superfamily
AFK63_RS16295	SM00490	helicase superfamily c-terminal domain
AFK63_RS16300	SM00028	Tetratricopeptide repeats
AFK63_RS16305	SM00316	Ribosomal protein S1-like RNA-binding domain
AFK63_RS16305	SM00322	K homology RNA-binding domain
AFK63_RS16310	SM01387	AFK63_RS16310
AFK63_RS16330	SM00316	Ribosomal protein S1-like RNA-binding domain
AFK63_RS16365	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS16375	SM01103	AFK63_RS16375
AFK63_RS16390	SM00448	cheY-homologous receiver domain
AFK63_RS16390	SM00862	Transcriptional regulatory protein, C terminal
AFK63_RS16395	SM00387	Histidine kinase-like ATPases
AFK63_RS16395	SM00388	His Kinase A (phosphoacceptor) domain
AFK63_RS16460	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS16490	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS16545	SM00073	Histidine Phosphotransfer domain
AFK63_RS16545	SM00091	PAS domain
AFK63_RS16545	SM00387	Histidine kinase-like ATPases
AFK63_RS16545	SM00388	His Kinase A (phosphoacceptor) domain
AFK63_RS16545	SM00448	cheY-homologous receiver domain
AFK63_RS16550	SM00729	Elongator protein 3, MiaB family, Radical SAM
AFK63_RS16570	SM00869	Autotransporter beta-domain
AFK63_RS16605	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AFK63_RS16610	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AFK63_RS16675	SM00316	Ribosomal protein S1-like RNA-binding domain
AFK63_RS16700	SM00052	Putative diguanylate phosphodiesterase
AFK63_RS16700	SM00267	diguanylate cyclase
AFK63_RS16705	SM00829	Enoylreductase
AFK63_RS16730	SM00878	Biotin carboxylase C-terminal domain
AFK63_RS16750	SM01057	Eukaryotic-type carbonic anhydrase
AFK63_RS16765	SM00052	Putative diguanylate phosphodiesterase
AFK63_RS16765	SM00267	diguanylate cyclase
AFK63_RS16790	SM00062	Bacterial periplasmic substrate-binding proteins
AFK63_RS16805	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS16840	SM00798	AICARFT/IMPCHase bienzyme
AFK63_RS16840	SM00851	MGS-like domain
AFK63_RS16845	SM01209	AFK63_RS16845
AFK63_RS16845	SM01210	AFK63_RS16845
AFK63_RS16855	SM00411	bacterial (prokaryotic) histone like domain
AFK63_RS16910	SM00876	Biotin and Thiamin Synthesis associated domain
AFK63_RS16930	SM00663	RNA polymerase I subunit A N-terminus
AFK63_RS16955	SM00649	Ribosomal protein L11/L12
AFK63_RS16960	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AFK63_RS16960	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AFK63_RS17080	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AFK63_RS17180	SM00341	Helicase and RNase D C-terminal
AFK63_RS17180	SM00487	DEAD-like helicases superfamily
AFK63_RS17180	SM00490	helicase superfamily c-terminal domain
AFK63_RS17180	SM00956	AFK63_RS17180
AFK63_RS17245	SM01219	AFK63_RS17245
AFK63_RS17345	SM00984	UDP binding domain
AFK63_RS17365	SM00357	Cold shock protein domain
AFK63_RS17365	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS17365	SM00959	Rho termination factor, N-terminal domain
AFK63_RS17375	SM00487	DEAD-like helicases superfamily
AFK63_RS17375	SM00490	helicase superfamily c-terminal domain
AFK63_RS17430	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS17530	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AFK63_RS17550	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AFK63_RS17550	SM00091	PAS domain
AFK63_RS17550	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AFK63_RS17560	SM00912	haemagglutination activity domain
AFK63_RS17595	SM00487	DEAD-like helicases superfamily
AFK63_RS17595	SM00490	helicase superfamily c-terminal domain
AFK63_RS17600	SM00354	helix_turn _helix lactose operon repressor
AFK63_RS17615	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS17615	SM01086	C-terminal, D2-small domain, of ClpB protein
AFK63_RS17655	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AFK63_RS17655	SM00895	AFK63_RS17655
AFK63_RS17680	SM00342	helix_turn_helix, arabinose operon control protein
AFK63_RS17685	SM00342	helix_turn_helix, arabinose operon control protein
AFK63_RS17700	SM01007	Class II Aldolase and Adducin N-terminal domain
AFK63_RS17710	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS17745	SM00354	helix_turn _helix lactose operon repressor
AFK63_RS17750	SM00530	Helix-turn-helix XRE-family like proteins 
AFK63_RS17775	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AFK63_RS17800	SM00342	helix_turn_helix, arabinose operon control protein
AFK63_RS17890	SM00860	SMI1 / KNR4 family
AFK63_RS17995	SM00248	ankyrin repeats
AFK63_RS18050	SM00248	ankyrin repeats
AFK63_RS18065	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS18065	SM01086	C-terminal, D2-small domain, of ClpB protein
AFK63_RS18095	SM00331	Sigma factor PP2C-like phosphatases
AFK63_RS18095	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AFK63_RS18250	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AFK63_RS18265	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AFK63_RS18265	SM00895	AFK63_RS18265
AFK63_RS18275	SM00387	Histidine kinase-like ATPases
AFK63_RS18275	SM00433	TopoisomeraseII
AFK63_RS18285	SM00480	DNA polymerase III beta subunit
AFK63_RS18290	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS18290	SM00760	Bacterial dnaA protein helix-turn-helix domain
AFK63_RS18345	SM00450	Rhodanese Homology Domain
AFK63_RS18450	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS18490	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS18535	SM01228	AFK63_RS18535
AFK63_RS18545	SM00344	helix_turn_helix ASNC type
AFK63_RS18555	SM00327	von Willebrand factor (vWF) type A domain
AFK63_RS18560	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS18575	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS18595	SM00354	helix_turn _helix lactose operon repressor
AFK63_RS18605	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AFK63_RS18605	SM00895	AFK63_RS18605
AFK63_RS18655	SM00563	Phosphate acyltransferases
AFK63_RS18660	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AFK63_RS18660	SM00474	3'-5' exonuclease
AFK63_RS18660	SM00475	5'-3' exonuclease
AFK63_RS18660	SM00482	DNA polymerase A domain
AFK63_RS18675	SM00729	Elongator protein 3, MiaB family, Radical SAM
AFK63_RS18680	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS18680	SM00448	cheY-homologous receiver domain
AFK63_RS18685	SM00091	PAS domain
AFK63_RS18685	SM00387	Histidine kinase-like ATPases
AFK63_RS18685	SM00388	His Kinase A (phosphoacceptor) domain
AFK63_RS18690	SM01230	AFK63_RS18690
AFK63_RS18720	SM01133	AFK63_RS18720
AFK63_RS18735	SM00420	helix_turn_helix, Deoxyribose operon repressor
AFK63_RS18735	SM01134	AFK63_RS18735
AFK63_RS18815	SM00487	DEAD-like helicases superfamily
AFK63_RS18815	SM00490	helicase superfamily c-terminal domain
AFK63_RS18825	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AFK63_RS18825	SM00954	Region found in RelA / SpoT proteins
AFK63_RS18830	SM01409	AFK63_RS18830
AFK63_RS18835	SM00072	Guanylate kinase homologues.
AFK63_RS18840	SM00532	Ligase N family
AFK63_RS18895	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AFK63_RS18895	SM01232	AFK63_RS18895
AFK63_RS18960	SM00829	Enoylreductase
AFK63_RS19000	SM00450	Rhodanese Homology Domain
AFK63_RS19020	SM00971	Serine acetyltransferase, N-terminal
AFK63_RS19030	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS19030	SM00387	Histidine kinase-like ATPases
AFK63_RS19030	SM00388	His Kinase A (phosphoacceptor) domain
AFK63_RS19035	SM00448	cheY-homologous receiver domain
AFK63_RS19035	SM00862	Transcriptional regulatory protein, C terminal
AFK63_RS19075	SM00095	Transthyretin
AFK63_RS19080	SM00448	cheY-homologous receiver domain
AFK63_RS19080	SM00862	Transcriptional regulatory protein, C terminal
AFK63_RS19085	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AFK63_RS19085	SM00387	Histidine kinase-like ATPases
AFK63_RS19085	SM00388	His Kinase A (phosphoacceptor) domain
AFK63_RS19100	SM00829	Enoylreductase
AFK63_RS19115	SM00028	Tetratricopeptide repeats
AFK63_RS19125	SM01092	CO dehydrogenase flavoprotein C-terminal domain
AFK63_RS19130	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AFK63_RS19170	SM00493	AFK63_RS19170
AFK63_RS19170	SM00778	Zinc-binding domain of primase-helicase
AFK63_RS19170	SM00885	D5 N terminal like
AFK63_RS19240	SM00642	Alpha-amylase domain
AFK63_RS19245	SM00047	Lysozyme subfamily 2
AFK63_RS19250	SM00342	helix_turn_helix, arabinose operon control protein
AFK63_RS19260	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS19285	SM00342	helix_turn_helix, arabinose operon control protein
AFK63_RS19315	SM00796	Allophanate hydrolase subunit 1
AFK63_RS19315	SM00797	Allophanate hydrolase subunit 2
AFK63_RS19315	SM00878	Biotin carboxylase C-terminal domain
AFK63_RS19330	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS19370	SM00354	helix_turn _helix lactose operon repressor
AFK63_RS19445	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS19450	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS19495	SM00028	Tetratricopeptide repeats
AFK63_RS19500	SM00052	Putative diguanylate phosphodiesterase
AFK63_RS19500	SM00267	diguanylate cyclase
AFK63_RS19520	SM00052	Putative diguanylate phosphodiesterase
AFK63_RS19625	SM01230	AFK63_RS19625
AFK63_RS19700	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS19700	SM00962	SRP54-type protein, GTPase domain
AFK63_RS19700	SM00963	SRP54-type protein, helical bundle domain
AFK63_RS19705	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS19720	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AFK63_RS19760	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS19765	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS19795	SM00382	ATPases associated with a variety of cellular activities
AFK63_RS19830	SM00354	helix_turn _helix lactose operon repressor
AFK63_RS19850	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AFK63_RS19855	SM00642	Alpha-amylase domain
AFK63_RS19860	SM00642	Alpha-amylase domain
AFK63_RS19885	SM00267	diguanylate cyclase
AFK63_RS19895	SM00450	Rhodanese Homology Domain
AFK63_RS19905	SM00420	helix_turn_helix, Deoxyribose operon repressor
AFK63_RS19905	SM01134	AFK63_RS19905
AFK63_RS19910	SM00421	helix_turn_helix, Lux Regulon
