RR42_RS03895 8ae2c7ec37e0dc2f4a4b8e36ea9b13a3 221 PANTHER PTHR30462 22 219 1.5E-31 T 23-04-2016 RR42_RS03895 8ae2c7ec37e0dc2f4a4b8e36ea9b13a3 221 PANTHER PTHR30462:SF3 22 219 1.5E-31 T 23-04-2016 RR42_RS03895 8ae2c7ec37e0dc2f4a4b8e36ea9b13a3 221 Pfam PF04403 Paraquat-inducible protein A 63 215 1.1E-48 T 23-04-2016 IPR007498 Paraquat-inducible protein A RR42_RS16815 b9997a77249dceddf509ba2081e888c5 393 PIRSF PIRSF000429 1 391 4.7E-62 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RR42_RS16815 b9997a77249dceddf509ba2081e888c5 393 Gene3D G3DSA:3.40.47.10 3 238 4.4E-26 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS16815 b9997a77249dceddf509ba2081e888c5 393 SUPERFAMILY SSF53901 6 117 9.79E-42 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS16815 b9997a77249dceddf509ba2081e888c5 393 SUPERFAMILY SSF53901 194 391 9.79E-42 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS16815 b9997a77249dceddf509ba2081e888c5 393 Pfam PF00108 Thiolase, N-terminal domain 5 112 1.7E-13 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RR42_RS16815 b9997a77249dceddf509ba2081e888c5 393 PANTHER PTHR18919:SF83 1 393 2.5E-159 T 23-04-2016 RR42_RS16815 b9997a77249dceddf509ba2081e888c5 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 78 96 - T 23-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 RR42_RS16815 b9997a77249dceddf509ba2081e888c5 393 ProSitePatterns PS00737 Thiolases signature 2. 332 348 - T 23-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RR42_RS16815 b9997a77249dceddf509ba2081e888c5 393 PANTHER PTHR18919 1 393 2.5E-159 T 23-04-2016 RR42_RS16815 b9997a77249dceddf509ba2081e888c5 393 Gene3D G3DSA:3.40.47.10 252 388 2.1E-22 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS16815 b9997a77249dceddf509ba2081e888c5 393 Pfam PF02803 Thiolase, C-terminal domain 270 366 5.0E-10 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RR42_RS26545 a91bb85f3e749639504c90f1542da525 327 SUPERFAMILY SSF103481 234 327 1.07E-14 T 23-04-2016 RR42_RS26545 a91bb85f3e749639504c90f1542da525 327 PANTHER PTHR22911 28 327 1.1E-50 T 23-04-2016 RR42_RS26545 a91bb85f3e749639504c90f1542da525 327 Pfam PF00892 EamA-like transporter family 190 326 7.3E-23 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS26545 a91bb85f3e749639504c90f1542da525 327 Pfam PF00892 EamA-like transporter family 49 182 2.4E-16 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS26545 a91bb85f3e749639504c90f1542da525 327 SUPERFAMILY SSF103481 85 185 3.53E-15 T 23-04-2016 RR42_RS02780 5310b4b62bb89918efbff23bb24df33e 349 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 333 34.473 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 RR42_RS02780 5310b4b62bb89918efbff23bb24df33e 349 Gene3D G3DSA:3.40.718.10 3 335 1.1E-122 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RR42_RS02780 5310b4b62bb89918efbff23bb24df33e 349 PANTHER PTHR30004 1 345 1.9E-142 T 23-04-2016 RR42_RS02780 5310b4b62bb89918efbff23bb24df33e 349 SUPERFAMILY SSF53659 6 335 1.67E-97 T 23-04-2016 RR42_RS02780 5310b4b62bb89918efbff23bb24df33e 349 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 39 329 3.3E-101 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 RR42_RS02780 5310b4b62bb89918efbff23bb24df33e 349 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 7 333 6.8E-120 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 RR42_RS02780 5310b4b62bb89918efbff23bb24df33e 349 PANTHER PTHR30004:SF5 1 345 1.9E-142 T 23-04-2016 RR42_RS04205 42524ced171802acd3331d4a78df1d81 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 2.2E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS04205 42524ced171802acd3331d4a78df1d81 316 SUPERFAMILY SSF53850 101 299 5.25E-28 T 23-04-2016 RR42_RS04205 42524ced171802acd3331d4a78df1d81 316 Gene3D G3DSA:3.40.190.10 185 260 1.5E-16 T 23-04-2016 RR42_RS04205 42524ced171802acd3331d4a78df1d81 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 5.4E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS04205 42524ced171802acd3331d4a78df1d81 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 5.4E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS04205 42524ced171802acd3331d4a78df1d81 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 5.4E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS04205 42524ced171802acd3331d4a78df1d81 316 SUPERFAMILY SSF46785 10 91 6.74E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS04205 42524ced171802acd3331d4a78df1d81 316 PANTHER PTHR30537 4 313 1.2E-68 T 23-04-2016 RR42_RS04205 42524ced171802acd3331d4a78df1d81 316 Pfam PF03466 LysR substrate binding domain 101 296 2.0E-23 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS04205 42524ced171802acd3331d4a78df1d81 316 Gene3D G3DSA:1.10.10.10 9 90 1.6E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS04205 42524ced171802acd3331d4a78df1d81 316 Gene3D G3DSA:3.40.190.10 101 184 6.1E-17 T 23-04-2016 RR42_RS04205 42524ced171802acd3331d4a78df1d81 316 PANTHER PTHR30537:SF26 4 313 1.2E-68 T 23-04-2016 RR42_RS06125 8332c0457f7ae8d645ab136e64fc5f4e 628 PANTHER PTHR21000 5 625 0.0 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RR42_RS06125 8332c0457f7ae8d645ab136e64fc5f4e 628 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RR42_RS06125 8332c0457f7ae8d645ab136e64fc5f4e 628 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 158 168 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RR42_RS06125 8332c0457f7ae8d645ab136e64fc5f4e 628 PANTHER PTHR21000:SF9 5 625 0.0 T 23-04-2016 RR42_RS06125 8332c0457f7ae8d645ab136e64fc5f4e 628 Pfam PF00920 Dehydratase family 71 605 1.0E-156 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RR42_RS06125 8332c0457f7ae8d645ab136e64fc5f4e 628 SUPERFAMILY SSF52016 423 607 3.69E-52 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RR42_RS06125 8332c0457f7ae8d645ab136e64fc5f4e 628 SUPERFAMILY SSF143975 5 422 7.19E-141 T 23-04-2016 RR42_RS06125 8332c0457f7ae8d645ab136e64fc5f4e 628 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 6 609 8.8E-288 T 23-04-2016 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12|UniPathway: UPA00226 RR42_RS02145 66f5060e4ccf4b735ae427871531f758 954 Gene3D G3DSA:1.20.1580.10 705 831 5.0E-54 T 23-04-2016 RR42_RS02145 66f5060e4ccf4b735ae427871531f758 954 PANTHER PTHR32282:SF2 1 183 0.0 T 23-04-2016 RR42_RS02145 66f5060e4ccf4b735ae427871531f758 954 PANTHER PTHR32282:SF2 200 954 0.0 T 23-04-2016 RR42_RS02145 66f5060e4ccf4b735ae427871531f758 954 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 951 22.243 T 23-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 RR42_RS02145 66f5060e4ccf4b735ae427871531f758 954 SUPERFAMILY SSF52540 1 204 1.42E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02145 66f5060e4ccf4b735ae427871531f758 954 SUPERFAMILY SSF52540 442 581 1.42E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02145 66f5060e4ccf4b735ae427871531f758 954 PANTHER PTHR32282 1 183 0.0 T 23-04-2016 RR42_RS02145 66f5060e4ccf4b735ae427871531f758 954 PANTHER PTHR32282 200 954 0.0 T 23-04-2016 RR42_RS02145 66f5060e4ccf4b735ae427871531f758 954 Gene3D G3DSA:3.40.50.300 832 949 6.1E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02145 66f5060e4ccf4b735ae427871531f758 954 Gene3D G3DSA:3.40.50.300 2 51 3.6E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02145 66f5060e4ccf4b735ae427871531f758 954 Gene3D G3DSA:3.40.50.300 613 688 6.1E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02145 66f5060e4ccf4b735ae427871531f758 954 Gene3D G3DSA:3.40.50.300 490 608 3.6E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02145 66f5060e4ccf4b735ae427871531f758 954 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 936 0.0 T 23-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 RR42_RS02145 66f5060e4ccf4b735ae427871531f758 954 Gene3D G3DSA:1.10.8.280 295 414 2.9E-43 T 23-04-2016 RR42_RS02145 66f5060e4ccf4b735ae427871531f758 954 Gene3D G3DSA:1.20.1580.10 91 129 8.2E-50 T 23-04-2016 RR42_RS02145 66f5060e4ccf4b735ae427871531f758 954 Gene3D G3DSA:1.20.1580.10 415 489 8.2E-50 T 23-04-2016 RR42_RS02145 66f5060e4ccf4b735ae427871531f758 954 Gene3D G3DSA:1.20.1580.10 259 292 8.2E-50 T 23-04-2016 RR42_RS02145 66f5060e4ccf4b735ae427871531f758 954 ProSitePatterns PS00211 ABC transporters family signature. 841 855 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS02145 66f5060e4ccf4b735ae427871531f758 954 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS02145 66f5060e4ccf4b735ae427871531f758 954 Gene3D G3DSA:3.30.1490.20 130 153 6.7E-29 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RR42_RS02145 66f5060e4ccf4b735ae427871531f758 954 Gene3D G3DSA:3.30.1490.20 210 257 6.7E-29 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RR42_RS02145 66f5060e4ccf4b735ae427871531f758 954 SUPERFAMILY SSF52540 630 924 7.62E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03825 e19198473a7d1aa6c177f4f19d460961 267 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 83 2.4E-16 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS03825 e19198473a7d1aa6c177f4f19d460961 267 Gene3D G3DSA:2.40.50.100 124 188 1.6E-29 T 23-04-2016 RR42_RS03825 e19198473a7d1aa6c177f4f19d460961 267 Pfam PF03459 TOBE domain 128 190 2.9E-15 T 23-04-2016 IPR005116 Transport-associated OB, type 1 RR42_RS03825 e19198473a7d1aa6c177f4f19d460961 267 Pfam PF03459 TOBE domain 201 263 6.7E-17 T 23-04-2016 IPR005116 Transport-associated OB, type 1 RR42_RS03825 e19198473a7d1aa6c177f4f19d460961 267 SUPERFAMILY SSF46785 3 107 4.15E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS03825 e19198473a7d1aa6c177f4f19d460961 267 PANTHER PTHR30432 2 267 1.6E-50 T 23-04-2016 RR42_RS03825 e19198473a7d1aa6c177f4f19d460961 267 SUPERFAMILY SSF50331 198 265 9.48E-21 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RR42_RS03825 e19198473a7d1aa6c177f4f19d460961 267 Gene3D G3DSA:2.40.50.100 198 265 6.2E-29 T 23-04-2016 RR42_RS03825 e19198473a7d1aa6c177f4f19d460961 267 SUPERFAMILY SSF50331 127 194 4.86E-21 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RR42_RS03825 e19198473a7d1aa6c177f4f19d460961 267 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 127 193 4.0E-23 T 23-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 RR42_RS03825 e19198473a7d1aa6c177f4f19d460961 267 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 198 264 3.1E-20 T 23-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 RR42_RS03825 e19198473a7d1aa6c177f4f19d460961 267 Gene3D G3DSA:1.10.10.10 2 123 2.2E-42 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS03825 e19198473a7d1aa6c177f4f19d460961 267 PIRSF PIRSF005763 1 267 3.9E-96 T 23-04-2016 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 RR42_RS09770 5ed440e5eb83652dfb4bd83057c8f7e1 913 SUPERFAMILY SSF56059 502 717 6.51E-39 T 23-04-2016 RR42_RS09770 5ed440e5eb83652dfb4bd83057c8f7e1 913 SUPERFAMILY SSF52210 134 297 3.92E-49 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RR42_RS09770 5ed440e5eb83652dfb4bd83057c8f7e1 913 Gene3D G3DSA:3.30.470.20 508 545 3.5E-5 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RR42_RS09770 5ed440e5eb83652dfb4bd83057c8f7e1 913 SUPERFAMILY SSF51735 2 144 6.83E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS09770 5ed440e5eb83652dfb4bd83057c8f7e1 913 Gene3D G3DSA:3.40.50.720 3 137 6.4E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS09770 5ed440e5eb83652dfb4bd83057c8f7e1 913 SUPERFAMILY SSF55729 741 884 3.37E-20 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS09770 5ed440e5eb83652dfb4bd83057c8f7e1 913 Gene3D G3DSA:3.40.50.261 138 291 3.5E-34 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RR42_RS09770 5ed440e5eb83652dfb4bd83057c8f7e1 913 SMART SM00881 9 104 2.8E-31 T 23-04-2016 IPR003781 CoA-binding GO:0048037 RR42_RS09770 5ed440e5eb83652dfb4bd83057c8f7e1 913 PANTHER PTHR11117:SF8 31 721 1.3E-279 T 23-04-2016 RR42_RS09770 5ed440e5eb83652dfb4bd83057c8f7e1 913 Pfam PF13380 CoA binding domain 13 139 2.9E-23 T 23-04-2016 IPR003781 CoA-binding GO:0048037 RR42_RS09770 5ed440e5eb83652dfb4bd83057c8f7e1 913 SUPERFAMILY SSF52210 301 468 2.35E-37 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RR42_RS09770 5ed440e5eb83652dfb4bd83057c8f7e1 913 Pfam PF13302 Acetyltransferase (GNAT) domain 747 885 1.8E-8 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RR42_RS09770 5ed440e5eb83652dfb4bd83057c8f7e1 913 Pfam PF13549 ATP-grasp domain 495 715 2.7E-86 T 23-04-2016 RR42_RS09770 5ed440e5eb83652dfb4bd83057c8f7e1 913 Gene3D G3DSA:3.40.630.30 743 889 2.0E-18 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS09770 5ed440e5eb83652dfb4bd83057c8f7e1 913 Gene3D G3DSA:3.40.50.261 292 458 1.9E-19 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RR42_RS09770 5ed440e5eb83652dfb4bd83057c8f7e1 913 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 156 293 8.7E-61 T 23-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain RR42_RS09770 5ed440e5eb83652dfb4bd83057c8f7e1 913 PANTHER PTHR11117 31 721 1.3E-279 T 23-04-2016 RR42_RS18200 19848363a3371a4e1942d597646f9609 305 Gene3D G3DSA:1.10.3720.10 95 300 4.5E-29 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS18200 19848363a3371a4e1942d597646f9609 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 302 1.1E-32 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS18200 19848363a3371a4e1942d597646f9609 305 SUPERFAMILY SSF161098 97 286 2.62E-29 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS18200 19848363a3371a4e1942d597646f9609 305 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 60 4.2E-10 T 23-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RR42_RS18200 19848363a3371a4e1942d597646f9609 305 PANTHER PTHR30465:SF67 26 304 6.3E-105 T 23-04-2016 RR42_RS18200 19848363a3371a4e1942d597646f9609 305 PANTHER PTHR30465 26 304 6.3E-105 T 23-04-2016 RR42_RS17290 a3d47b9ec0a6cb590a47afda4d59aa97 296 PANTHER PTHR30537 3 293 3.7E-82 T 23-04-2016 RR42_RS17290 a3d47b9ec0a6cb590a47afda4d59aa97 296 SUPERFAMILY SSF53850 93 293 3.08E-32 T 23-04-2016 RR42_RS17290 a3d47b9ec0a6cb590a47afda4d59aa97 296 PANTHER PTHR30537:SF26 3 293 3.7E-82 T 23-04-2016 RR42_RS17290 a3d47b9ec0a6cb590a47afda4d59aa97 296 Pfam PF03466 LysR substrate binding domain 94 292 2.0E-32 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS17290 a3d47b9ec0a6cb590a47afda4d59aa97 296 Gene3D G3DSA:3.40.190.10 97 182 3.1E-23 T 23-04-2016 RR42_RS17290 a3d47b9ec0a6cb590a47afda4d59aa97 296 Gene3D G3DSA:3.40.190.10 183 261 5.1E-8 T 23-04-2016 RR42_RS17290 a3d47b9ec0a6cb590a47afda4d59aa97 296 SUPERFAMILY SSF46785 9 116 1.09E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS17290 a3d47b9ec0a6cb590a47afda4d59aa97 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 6.8E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS17290 a3d47b9ec0a6cb590a47afda4d59aa97 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 6.8E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS17290 a3d47b9ec0a6cb590a47afda4d59aa97 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 6.8E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS17290 a3d47b9ec0a6cb590a47afda4d59aa97 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 4.7E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS17290 a3d47b9ec0a6cb590a47afda4d59aa97 296 Gene3D G3DSA:1.10.10.10 8 88 6.8E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19665 3c03076cba6034008983b09503e0231f 165 Pfam PF08534 Redoxin 30 151 1.6E-16 T 23-04-2016 IPR013740 Redoxin GO:0016491 RR42_RS19665 3c03076cba6034008983b09503e0231f 165 Gene3D G3DSA:3.40.30.10 7 156 6.0E-31 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS19665 3c03076cba6034008983b09503e0231f 165 SUPERFAMILY SSF52833 22 156 1.58E-28 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS16370 3cf0a2aec3fb49ae3a93096d62155751 260 Pfam PF00005 ABC transporter 35 183 3.0E-38 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS16370 3cf0a2aec3fb49ae3a93096d62155751 260 PANTHER PTHR24220:SF474 21 260 5.8E-160 T 23-04-2016 RR42_RS16370 3cf0a2aec3fb49ae3a93096d62155751 260 PIRSF PIRSF039085 16 259 4.2E-109 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RR42_RS16370 3cf0a2aec3fb49ae3a93096d62155751 260 SUPERFAMILY SSF52540 20 253 1.82E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS16370 3cf0a2aec3fb49ae3a93096d62155751 260 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS16370 3cf0a2aec3fb49ae3a93096d62155751 260 Gene3D G3DSA:3.40.50.300 19 254 1.7E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS16370 3cf0a2aec3fb49ae3a93096d62155751 260 SMART SM00382 44 231 1.7E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS16370 3cf0a2aec3fb49ae3a93096d62155751 260 PANTHER PTHR24220 21 260 5.8E-160 T 23-04-2016 RR42_RS19350 0b9f81e360f73f49c08e12616c6849c5 126 PANTHER PTHR33910 1 126 6.4E-16 T 23-04-2016 RR42_RS19350 0b9f81e360f73f49c08e12616c6849c5 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 62 120 11.246 T 23-04-2016 IPR022943 Preprotein translocase subunit SecE RR42_RS19350 0b9f81e360f73f49c08e12616c6849c5 126 Gene3D G3DSA:1.20.5.1030 64 121 9.7E-23 T 23-04-2016 RR42_RS19350 0b9f81e360f73f49c08e12616c6849c5 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 68 122 5.2E-18 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RR42_RS19350 0b9f81e360f73f49c08e12616c6849c5 126 PRINTS PR01650 Bacterial translocase SecE signature 64 84 2.0E-9 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RR42_RS19350 0b9f81e360f73f49c08e12616c6849c5 126 PRINTS PR01650 Bacterial translocase SecE signature 43 64 2.0E-9 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RR42_RS19350 0b9f81e360f73f49c08e12616c6849c5 126 PRINTS PR01650 Bacterial translocase SecE signature 88 108 2.0E-9 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RR42_RS19350 0b9f81e360f73f49c08e12616c6849c5 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 69 119 4.9E-19 T 23-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 RR42_RS19350 0b9f81e360f73f49c08e12616c6849c5 126 PANTHER PTHR33910:SF1 1 126 6.4E-16 T 23-04-2016 RR42_RS06070 57bb2090badd179839cc18a36af87bdb 512 Pfam PF01336 OB-fold nucleic acid binding domain 72 149 3.3E-15 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RR42_RS06070 57bb2090badd179839cc18a36af87bdb 512 PANTHER PTHR22594:SF4 16 512 4.7E-257 T 23-04-2016 RR42_RS06070 57bb2090badd179839cc18a36af87bdb 512 Gene3D G3DSA:2.40.50.140 20 157 3.1E-49 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS06070 57bb2090badd179839cc18a36af87bdb 512 PANTHER PTHR22594 16 512 4.7E-257 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS06070 57bb2090badd179839cc18a36af87bdb 512 PRINTS PR00982 Lysyl-tRNA synthetase signature 265 282 2.1E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RR42_RS06070 57bb2090badd179839cc18a36af87bdb 512 PRINTS PR00982 Lysyl-tRNA synthetase signature 218 234 2.1E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RR42_RS06070 57bb2090badd179839cc18a36af87bdb 512 PRINTS PR00982 Lysyl-tRNA synthetase signature 247 260 2.1E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RR42_RS06070 57bb2090badd179839cc18a36af87bdb 512 PRINTS PR00982 Lysyl-tRNA synthetase signature 202 212 2.1E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RR42_RS06070 57bb2090badd179839cc18a36af87bdb 512 PRINTS PR00982 Lysyl-tRNA synthetase signature 393 409 2.1E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RR42_RS06070 57bb2090badd179839cc18a36af87bdb 512 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 25 511 43.417 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 RR42_RS06070 57bb2090badd179839cc18a36af87bdb 512 Pfam PF00152 tRNA synthetases class II (D, K and N) 166 508 1.2E-84 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS06070 57bb2090badd179839cc18a36af87bdb 512 SUPERFAMILY SSF55681 165 509 1.24E-116 T 23-04-2016 RR42_RS06070 57bb2090badd179839cc18a36af87bdb 512 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 20 510 4.2E-199 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 RR42_RS06070 57bb2090badd179839cc18a36af87bdb 512 Gene3D G3DSA:3.30.930.10 163 507 2.6E-115 T 23-04-2016 RR42_RS06070 57bb2090badd179839cc18a36af87bdb 512 SUPERFAMILY SSF50249 18 157 2.1E-43 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS13800 58ed35447ea102a6b133d5772b8c24a6 288 Pfam PF00551 Formyl transferase 90 269 2.9E-37 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RR42_RS13800 58ed35447ea102a6b133d5772b8c24a6 288 Gene3D G3DSA:3.40.50.170 88 283 5.9E-55 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RR42_RS13800 58ed35447ea102a6b133d5772b8c24a6 288 SUPERFAMILY SSF55021 6 86 1.29E-19 T 23-04-2016 RR42_RS13800 58ed35447ea102a6b133d5772b8c24a6 288 Pfam PF01842 ACT domain 7 43 7.4E-7 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RR42_RS13800 58ed35447ea102a6b133d5772b8c24a6 288 Gene3D G3DSA:3.30.70.260 3 84 2.4E-28 T 23-04-2016 RR42_RS13800 58ed35447ea102a6b133d5772b8c24a6 288 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 7 287 8.2E-100 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RR42_RS13800 58ed35447ea102a6b133d5772b8c24a6 288 PIRSF PIRSF036480 3 288 7.6E-107 T 23-04-2016 RR42_RS13800 58ed35447ea102a6b133d5772b8c24a6 288 PANTHER PTHR10520 1 281 5.0E-145 T 23-04-2016 RR42_RS13800 58ed35447ea102a6b133d5772b8c24a6 288 SUPERFAMILY SSF53328 90 288 3.66E-60 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RR42_RS13800 58ed35447ea102a6b133d5772b8c24a6 288 PANTHER PTHR10520:SF7 1 281 5.0E-145 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RR42_RS13800 58ed35447ea102a6b133d5772b8c24a6 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 239 261 5.3E-54 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RR42_RS13800 58ed35447ea102a6b133d5772b8c24a6 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 8 34 5.3E-54 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RR42_RS13800 58ed35447ea102a6b133d5772b8c24a6 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 261 286 5.3E-54 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RR42_RS13800 58ed35447ea102a6b133d5772b8c24a6 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 112 139 5.3E-54 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RR42_RS13800 58ed35447ea102a6b133d5772b8c24a6 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 40 52 5.3E-54 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RR42_RS13800 58ed35447ea102a6b133d5772b8c24a6 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 90 112 5.3E-54 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RR42_RS13800 58ed35447ea102a6b133d5772b8c24a6 288 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 3 287 47.119 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RR42_RS03445 e1fc501d3a22b77659940275470877b5 221 Gene3D G3DSA:3.40.50.300 1 219 6.0E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03445 e1fc501d3a22b77659940275470877b5 221 TIGRFAM TIGR01351 adk: adenylate kinase 2 189 8.6E-74 T 23-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RR42_RS03445 e1fc501d3a22b77659940275470877b5 221 Hamap MF_00235 Adenylate kinase [adk]. 1 221 52.135 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RR42_RS03445 e1fc501d3a22b77659940275470877b5 221 Pfam PF00406 Adenylate kinase 5 185 9.5E-58 T 23-04-2016 RR42_RS03445 e1fc501d3a22b77659940275470877b5 221 SUPERFAMILY SSF52540 1 218 8.63E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03445 e1fc501d3a22b77659940275470877b5 221 PANTHER PTHR23359 1 220 3.5E-105 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RR42_RS03445 e1fc501d3a22b77659940275470877b5 221 Pfam PF05191 Adenylate kinase, active site lid 123 158 3.0E-16 T 23-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RR42_RS03445 e1fc501d3a22b77659940275470877b5 221 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RR42_RS03445 e1fc501d3a22b77659940275470877b5 221 PRINTS PR00094 Adenylate kinase signature 81 97 1.2E-36 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RR42_RS03445 e1fc501d3a22b77659940275470877b5 221 PRINTS PR00094 Adenylate kinase signature 4 17 1.2E-36 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RR42_RS03445 e1fc501d3a22b77659940275470877b5 221 PRINTS PR00094 Adenylate kinase signature 32 46 1.2E-36 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RR42_RS03445 e1fc501d3a22b77659940275470877b5 221 PRINTS PR00094 Adenylate kinase signature 173 187 1.2E-36 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RR42_RS03445 e1fc501d3a22b77659940275470877b5 221 PRINTS PR00094 Adenylate kinase signature 156 171 1.2E-36 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RR42_RS10010 13766549e4d7773899fe1ca5b5687fff 220 SUPERFAMILY SSF100950 6 210 4.19E-59 T 23-04-2016 RR42_RS10010 13766549e4d7773899fe1ca5b5687fff 220 SMART SM00882 7 204 1.1E-50 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RR42_RS10010 13766549e4d7773899fe1ca5b5687fff 220 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 45 53 - T 23-04-2016 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 RR42_RS10010 13766549e4d7773899fe1ca5b5687fff 220 PANTHER PTHR13707 1 192 1.3E-70 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RR42_RS10010 13766549e4d7773899fe1ca5b5687fff 220 Gene3D G3DSA:3.40.810.20 6 213 2.0E-71 T 23-04-2016 RR42_RS10010 13766549e4d7773899fe1ca5b5687fff 220 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 5 210 2.4E-81 T 23-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 RR42_RS10010 13766549e4d7773899fe1ca5b5687fff 220 Pfam PF01144 Coenzyme A transferase 9 182 1.1E-34 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RR42_RS19995 06e3f572625b86380c110535fa9ecb79 134 Gene3D G3DSA:3.30.160.200 3 104 4.8E-31 T 23-04-2016 RR42_RS19995 06e3f572625b86380c110535fa9ecb79 134 PANTHER PTHR11075 2 132 2.3E-32 T 23-04-2016 RR42_RS19995 06e3f572625b86380c110535fa9ecb79 134 Pfam PF00472 RF-1 domain 3 129 5.0E-22 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RR42_RS19995 06e3f572625b86380c110535fa9ecb79 134 SUPERFAMILY SSF75620 4 95 5.89E-9 T 23-04-2016 RR42_RS07300 8ba89a207f310fa01a57cab3df0c95f5 461 PANTHER PTHR11271:SF37 4 456 7.5E-185 T 23-04-2016 RR42_RS07300 8ba89a207f310fa01a57cab3df0c95f5 461 Gene3D G3DSA:2.30.40.10 366 438 6.8E-9 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS07300 8ba89a207f310fa01a57cab3df0c95f5 461 SUPERFAMILY SSF51556 67 380 2.63E-97 T 23-04-2016 IPR032466 Metal-dependent hydrolase RR42_RS07300 8ba89a207f310fa01a57cab3df0c95f5 461 Gene3D G3DSA:2.30.40.10 1 75 1.0E-13 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS07300 8ba89a207f310fa01a57cab3df0c95f5 461 Pfam PF01979 Amidohydrolase family 64 429 6.4E-64 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RR42_RS07300 8ba89a207f310fa01a57cab3df0c95f5 461 PANTHER PTHR11271 4 456 7.5E-185 T 23-04-2016 RR42_RS07300 8ba89a207f310fa01a57cab3df0c95f5 461 Gene3D G3DSA:3.20.20.140 76 365 2.9E-103 T 23-04-2016 RR42_RS07300 8ba89a207f310fa01a57cab3df0c95f5 461 SUPERFAMILY SSF51338 4 67 1.76E-21 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS07300 8ba89a207f310fa01a57cab3df0c95f5 461 SUPERFAMILY SSF51338 380 455 1.76E-21 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS04840 08806b973a4420064d9bcca1b8205242 452 Pfam PF13378 Enolase C-terminal domain-like 196 411 1.6E-35 T 23-04-2016 IPR029065 Enolase C-terminal domain-like RR42_RS04840 08806b973a4420064d9bcca1b8205242 452 SUPERFAMILY SSF51604 146 422 3.87E-80 T 23-04-2016 IPR029065 Enolase C-terminal domain-like RR42_RS04840 08806b973a4420064d9bcca1b8205242 452 Gene3D G3DSA:3.30.390.10 36 129 1.3E-10 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RR42_RS04840 08806b973a4420064d9bcca1b8205242 452 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 48 144 2.3E-5 T 23-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RR42_RS04840 08806b973a4420064d9bcca1b8205242 452 SMART SM00922 192 292 1.6E-13 T 23-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RR42_RS04840 08806b973a4420064d9bcca1b8205242 452 PANTHER PTHR13794 180 437 4.3E-278 T 23-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 RR42_RS04840 08806b973a4420064d9bcca1b8205242 452 PANTHER PTHR13794 14 159 4.3E-278 T 23-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 RR42_RS04840 08806b973a4420064d9bcca1b8205242 452 PANTHER PTHR13794:SF47 180 437 4.3E-278 T 23-04-2016 RR42_RS04840 08806b973a4420064d9bcca1b8205242 452 PANTHER PTHR13794:SF47 14 159 4.3E-278 T 23-04-2016 RR42_RS04840 08806b973a4420064d9bcca1b8205242 452 Gene3D G3DSA:3.20.20.120 130 404 2.6E-101 T 23-04-2016 IPR029065 Enolase C-terminal domain-like RR42_RS04840 08806b973a4420064d9bcca1b8205242 452 SUPERFAMILY SSF54826 14 144 3.03E-34 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RR42_RS04840 08806b973a4420064d9bcca1b8205242 452 TIGRFAM TIGR03247 glucar-dehydr: glucarate dehydratase 13 452 8.1E-259 T 23-04-2016 IPR017653 Glucarate dehydratase GO:0000287|GO:0008872|GO:0019394 KEGG: 00053+4.2.1.40|MetaCyc: PWY-6499|UniPathway: UPA00564 RR42_RS03380 e5dcd9eb2104471bde1bdec05d63b747 546 Pfam PF00342 Phosphoglucose isomerase 52 534 1.6E-192 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS03380 e5dcd9eb2104471bde1bdec05d63b747 546 Gene3D G3DSA:1.10.1390.10 501 539 1.3E-16 T 23-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS03380 e5dcd9eb2104471bde1bdec05d63b747 546 Gene3D G3DSA:3.40.50.10490 294 500 1.1E-116 T 23-04-2016 RR42_RS03380 e5dcd9eb2104471bde1bdec05d63b747 546 Gene3D G3DSA:3.40.50.10490 8 98 1.1E-116 T 23-04-2016 RR42_RS03380 e5dcd9eb2104471bde1bdec05d63b747 546 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 491 508 - T 23-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS03380 e5dcd9eb2104471bde1bdec05d63b747 546 PANTHER PTHR11469 8 545 4.5E-250 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS03380 e5dcd9eb2104471bde1bdec05d63b747 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 459 477 2.9E-52 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS03380 e5dcd9eb2104471bde1bdec05d63b747 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 477 491 2.9E-52 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS03380 e5dcd9eb2104471bde1bdec05d63b747 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 2.9E-52 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS03380 e5dcd9eb2104471bde1bdec05d63b747 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 2.9E-52 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS03380 e5dcd9eb2104471bde1bdec05d63b747 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 2.9E-52 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS03380 e5dcd9eb2104471bde1bdec05d63b747 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 491 504 2.9E-52 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS03380 e5dcd9eb2104471bde1bdec05d63b747 546 Gene3D G3DSA:3.40.50.10490 99 291 9.7E-77 T 23-04-2016 RR42_RS03380 e5dcd9eb2104471bde1bdec05d63b747 546 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 518 39.11 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS03380 e5dcd9eb2104471bde1bdec05d63b747 546 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 23-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS03380 e5dcd9eb2104471bde1bdec05d63b747 546 SUPERFAMILY SSF53697 7 540 4.17E-192 T 23-04-2016 RR42_RS03360 4ef51821c0be9939fd2956a7bc95d85e 537 SUPERFAMILY SSF52540 9 234 4.74E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03360 4ef51821c0be9939fd2956a7bc95d85e 537 Gene3D G3DSA:3.40.50.300 274 499 1.0E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03360 4ef51821c0be9939fd2956a7bc95d85e 537 PANTHER PTHR24220 12 394 4.6E-162 T 23-04-2016 RR42_RS03360 4ef51821c0be9939fd2956a7bc95d85e 537 Gene3D G3DSA:3.40.50.300 7 241 2.0E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03360 4ef51821c0be9939fd2956a7bc95d85e 537 SUPERFAMILY SSF52540 275 495 2.09E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03360 4ef51821c0be9939fd2956a7bc95d85e 537 PANTHER PTHR24220:SF416 12 394 4.6E-162 T 23-04-2016 RR42_RS03360 4ef51821c0be9939fd2956a7bc95d85e 537 ProSitePatterns PS00211 ABC transporters family signature. 412 426 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS03360 4ef51821c0be9939fd2956a7bc95d85e 537 Pfam PF00005 ABC transporter 278 439 1.9E-18 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS03360 4ef51821c0be9939fd2956a7bc95d85e 537 Pfam PF00005 ABC transporter 26 175 4.4E-25 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS03360 4ef51821c0be9939fd2956a7bc95d85e 537 SMART SM00382 35 224 1.5E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS03360 4ef51821c0be9939fd2956a7bc95d85e 537 SMART SM00382 286 496 5.6E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS14645 4a83e9b4cce4d04c0b332a606049be25 561 ProSitePatterns PS01233 Urocanase signature. 442 457 - T 23-04-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RR42_RS14645 4a83e9b4cce4d04c0b332a606049be25 561 Gene3D G3DSA:3.40.50.10730 142 349 3.1E-94 T 23-04-2016 RR42_RS14645 4a83e9b4cce4d04c0b332a606049be25 561 Gene3D G3DSA:3.40.1770.10 360 555 1.5E-164 T 23-04-2016 RR42_RS14645 4a83e9b4cce4d04c0b332a606049be25 561 Gene3D G3DSA:3.40.1770.10 8 141 1.5E-164 T 23-04-2016 RR42_RS14645 4a83e9b4cce4d04c0b332a606049be25 561 PIRSF PIRSF001423 3 561 8.6E-294 T 23-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RR42_RS14645 4a83e9b4cce4d04c0b332a606049be25 561 Hamap MF_00577 Urocanate hydratase [hutU]. 4 556 50.296 T 23-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RR42_RS14645 4a83e9b4cce4d04c0b332a606049be25 561 TIGRFAM TIGR01228 hutU: urocanate hydratase 11 554 0.0 T 23-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RR42_RS14645 4a83e9b4cce4d04c0b332a606049be25 561 Pfam PF01175 Urocanase 12 547 8.5E-261 T 23-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RR42_RS14645 4a83e9b4cce4d04c0b332a606049be25 561 SUPERFAMILY SSF111326 7 555 2.09E-261 T 23-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RR42_RS14645 4a83e9b4cce4d04c0b332a606049be25 561 PANTHER PTHR12216 6 555 0.0 T 23-04-2016 RR42_RS14645 4a83e9b4cce4d04c0b332a606049be25 561 PANTHER PTHR12216:SF3 6 555 0.0 T 23-04-2016 RR42_RS17200 ef36e3f40ec8874edf83dc70cfcf4cbd 213 PANTHER PTHR30353:SF0 1 201 8.5E-70 T 23-04-2016 RR42_RS17200 ef36e3f40ec8874edf83dc70cfcf4cbd 213 Pfam PF09335 SNARE associated Golgi protein 45 169 1.8E-22 T 23-04-2016 IPR032816 SNARE associated Golgi protein RR42_RS17200 ef36e3f40ec8874edf83dc70cfcf4cbd 213 PANTHER PTHR30353 1 201 8.5E-70 T 23-04-2016 IPR032818 DedA family RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 SUPERFAMILY SSF51905 1 350 1.46E-60 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 Gene3D G3DSA:3.50.50.60 2 152 3.1E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 188 213 1.2E-77 T 23-04-2016 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 420 435 1.2E-77 T 23-04-2016 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 47 62 1.2E-77 T 23-04-2016 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 161 1.2E-77 T 23-04-2016 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 442 462 1.2E-77 T 23-04-2016 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 320 327 1.2E-77 T 23-04-2016 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 277 291 1.2E-77 T 23-04-2016 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 355 376 1.2E-77 T 23-04-2016 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.2E-77 T 23-04-2016 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 340 3.7E-71 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 Gene3D G3DSA:3.30.390.30 347 474 3.7E-50 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 Gene3D G3DSA:3.50.50.60 153 346 6.2E-53 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 359 467 9.5E-38 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 478 7.2E-166 T 23-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 SUPERFAMILY SSF55424 355 476 5.84E-42 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 48 58 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 292 3.0E-42 T 23-04-2016 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 188 206 3.0E-42 T 23-04-2016 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 305 327 3.0E-42 T 23-04-2016 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 3.0E-42 T 23-04-2016 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.0E-42 T 23-04-2016 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 PANTHER PTHR22912 1 129 8.4E-230 T 23-04-2016 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 PANTHER PTHR22912 147 471 8.4E-230 T 23-04-2016 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 PANTHER PTHR22912:SF131 1 129 8.4E-230 T 23-04-2016 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 PANTHER PTHR22912:SF131 147 471 8.4E-230 T 23-04-2016 RR42_RS12930 950b560bdf440ef726584d4c8189aca7 478 PIRSF PIRSF000350 1 477 3.5E-85 T 23-04-2016 RR42_RS10525 42a78c6043b757fe5005434350f470da 329 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 325 1.9E-77 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS10525 42a78c6043b757fe5005434350f470da 329 PANTHER PTHR30349:SF16 10 298 2.8E-81 T 23-04-2016 RR42_RS10525 42a78c6043b757fe5005434350f470da 329 PANTHER PTHR30349 10 298 2.8E-81 T 23-04-2016 RR42_RS10525 42a78c6043b757fe5005434350f470da 329 SUPERFAMILY SSF53850 118 288 1.88E-8 T 23-04-2016 RR42_RS10525 42a78c6043b757fe5005434350f470da 329 PIRSF PIRSF017082 1 329 1.2E-70 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS11540 962a9d436e30b8db42f85ae8496129aa 795 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 173 1.1E-13 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RR42_RS11540 962a9d436e30b8db42f85ae8496129aa 795 Pfam PF00593 TonB dependent receptor 502 792 8.9E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RR42_RS11540 962a9d436e30b8db42f85ae8496129aa 795 Gene3D G3DSA:2.170.130.10 36 174 4.8E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RR42_RS11540 962a9d436e30b8db42f85ae8496129aa 795 SUPERFAMILY SSF56935 36 793 8.79E-100 T 23-04-2016 RR42_RS11540 962a9d436e30b8db42f85ae8496129aa 795 Gene3D G3DSA:2.40.170.20 175 794 9.7E-88 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RR42_RS11540 962a9d436e30b8db42f85ae8496129aa 795 PANTHER PTHR32552 361 795 2.0E-28 T 23-04-2016 RR42_RS11540 962a9d436e30b8db42f85ae8496129aa 795 PANTHER PTHR32552 1 331 2.0E-28 T 23-04-2016 RR42_RS04325 98cd6287574f748e418f87996310d378 212 SUPERFAMILY SSF89392 29 212 1.8E-46 T 23-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX RR42_RS04325 98cd6287574f748e418f87996310d378 212 PANTHER PTHR35869 1 212 1.9E-37 T 23-04-2016 RR42_RS04325 98cd6287574f748e418f87996310d378 212 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 37 201 2.2E-42 T 23-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like RR42_RS04325 98cd6287574f748e418f87996310d378 212 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 13 212 29.184 T 23-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 RR42_RS04325 98cd6287574f748e418f87996310d378 212 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 9 210 1.6E-15 T 23-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 RR42_RS04325 98cd6287574f748e418f87996310d378 212 Gene3D G3DSA:2.50.20.10 28 212 1.9E-65 T 23-04-2016 RR42_RS02730 5ec88f154e3280940ffc676f3fe5f029 364 PIRSF PIRSF006621 1 332 1.4E-104 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RR42_RS02730 5ec88f154e3280940ffc676f3fe5f029 364 Gene3D G3DSA:1.10.1200.80 257 328 4.4E-25 T 23-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 RR42_RS02730 5ec88f154e3280940ffc676f3fe5f029 364 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 324 3.6E-122 T 23-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 RR42_RS02730 5ec88f154e3280940ffc676f3fe5f029 364 PANTHER PTHR11082:SF25 2 331 1.4E-135 T 23-04-2016 RR42_RS02730 5ec88f154e3280940ffc676f3fe5f029 364 PANTHER PTHR11082 2 331 1.4E-135 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RR42_RS02730 5ec88f154e3280940ffc676f3fe5f029 364 SUPERFAMILY SSF51395 10 324 2.31E-89 T 23-04-2016 RR42_RS02730 5ec88f154e3280940ffc676f3fe5f029 364 Gene3D G3DSA:3.20.20.70 7 249 1.2E-83 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS02730 5ec88f154e3280940ffc676f3fe5f029 364 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 23-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 RR42_RS02730 5ec88f154e3280940ffc676f3fe5f029 364 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 326 50.515 T 23-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 RR42_RS02730 5ec88f154e3280940ffc676f3fe5f029 364 Pfam PF01207 Dihydrouridine synthase (Dus) 14 323 2.1E-106 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RR42_RS14295 614f3a9bd5b8d1e73034bda5198f9119 317 SUPERFAMILY SSF52540 18 239 7.07E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14295 614f3a9bd5b8d1e73034bda5198f9119 317 PANTHER PTHR24220 20 253 1.1E-99 T 23-04-2016 RR42_RS14295 614f3a9bd5b8d1e73034bda5198f9119 317 Gene3D G3DSA:3.40.50.300 15 240 1.6E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14295 614f3a9bd5b8d1e73034bda5198f9119 317 Pfam PF00005 ABC transporter 35 177 1.6E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS14295 614f3a9bd5b8d1e73034bda5198f9119 317 PANTHER PTHR24220:SF165 20 253 1.1E-99 T 23-04-2016 RR42_RS14295 614f3a9bd5b8d1e73034bda5198f9119 317 TIGRFAM TIGR01288 nodI: nodulation ABC transporter NodI 19 317 9.7E-145 T 23-04-2016 IPR005978 Nodulation ABC transporter, NodI GO:0005215|GO:0005524|GO:0006810|GO:0009877|GO:0016020 RR42_RS14295 614f3a9bd5b8d1e73034bda5198f9119 317 SMART SM00382 43 229 3.2E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS14295 614f3a9bd5b8d1e73034bda5198f9119 317 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS11100 7a9287c90e1291ff294f92e649bffae4 509 PANTHER PTHR11785:SF204 14 486 9.2E-198 T 23-04-2016 RR42_RS11100 7a9287c90e1291ff294f92e649bffae4 509 PANTHER PTHR11785 14 486 9.2E-198 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RR42_RS11100 7a9287c90e1291ff294f92e649bffae4 509 ProSitePatterns PS00218 Amino acid permeases signature. 51 82 - T 23-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RR42_RS11100 7a9287c90e1291ff294f92e649bffae4 509 PIRSF PIRSF006060 8 489 2.5E-79 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RR42_RS11100 7a9287c90e1291ff294f92e649bffae4 509 Pfam PF00324 Amino acid permease 26 479 3.1E-124 T 23-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RR42_RS11045 e687aa43605d3f4b9862d6e503f45bba 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 2.1E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11045 e687aa43605d3f4b9862d6e503f45bba 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 2.1E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11045 e687aa43605d3f4b9862d6e503f45bba 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 2.1E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11045 e687aa43605d3f4b9862d6e503f45bba 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 2.1E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11045 e687aa43605d3f4b9862d6e503f45bba 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.1E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11045 e687aa43605d3f4b9862d6e503f45bba 273 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 217 7.6E-7 T 23-04-2016 RR42_RS11045 e687aa43605d3f4b9862d6e503f45bba 273 SUPERFAMILY SSF51735 6 267 1.06E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS11045 e687aa43605d3f4b9862d6e503f45bba 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 2.7E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11045 e687aa43605d3f4b9862d6e503f45bba 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 2.7E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11045 e687aa43605d3f4b9862d6e503f45bba 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 2.7E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11045 e687aa43605d3f4b9862d6e503f45bba 273 PANTHER PTHR24320 8 196 1.8E-57 T 23-04-2016 RR42_RS11045 e687aa43605d3f4b9862d6e503f45bba 273 Pfam PF00106 short chain dehydrogenase 10 198 2.1E-55 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11045 e687aa43605d3f4b9862d6e503f45bba 273 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RR42_RS11045 e687aa43605d3f4b9862d6e503f45bba 273 Gene3D G3DSA:3.40.50.720 8 266 4.2E-69 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS33730 33ba1cc614e003264c89f2287dd8bda8 444 Pfam PF00672 HAMP domain 235 294 2.6E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS33730 33ba1cc614e003264c89f2287dd8bda8 444 Gene3D G3DSA:3.30.565.10 347 442 1.5E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS33730 33ba1cc614e003264c89f2287dd8bda8 444 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 397 443 1.0E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS33730 33ba1cc614e003264c89f2287dd8bda8 444 Gene3D G3DSA:1.10.287.130 291 346 1.2E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS33730 33ba1cc614e003264c89f2287dd8bda8 444 SMART SM00388 301 359 1.8E-4 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS33730 33ba1cc614e003264c89f2287dd8bda8 444 SUPERFAMILY SSF55874 336 442 2.1E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS33730 33ba1cc614e003264c89f2287dd8bda8 444 SUPERFAMILY SSF47384 284 355 3.14E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS33730 33ba1cc614e003264c89f2287dd8bda8 444 PANTHER PTHR24423 242 443 7.4E-22 T 23-04-2016 RR42_RS33730 33ba1cc614e003264c89f2287dd8bda8 444 PANTHER PTHR24423 66 81 7.4E-22 T 23-04-2016 RR42_RS33730 33ba1cc614e003264c89f2287dd8bda8 444 SUPERFAMILY SSF158472 249 294 7.19E-6 T 23-04-2016 RR42_RS33730 33ba1cc614e003264c89f2287dd8bda8 444 SMART SM00304 248 300 3.4E-6 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS15625 3cc762fcee7a1c3b24648b8f0fcf4d20 255 Gene3D G3DSA:3.40.50.150 77 238 5.7E-19 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS15625 3cc762fcee7a1c3b24648b8f0fcf4d20 255 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 67 253 3.6E-53 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 RR42_RS15625 3cc762fcee7a1c3b24648b8f0fcf4d20 255 PANTHER PTHR23417:SF14 33 254 6.8E-72 T 23-04-2016 RR42_RS15625 3cc762fcee7a1c3b24648b8f0fcf4d20 255 PANTHER PTHR23417 33 254 6.8E-72 T 23-04-2016 RR42_RS15625 3cc762fcee7a1c3b24648b8f0fcf4d20 255 Pfam PF02390 Putative methyltransferase 79 248 3.2E-52 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 RR42_RS15625 3cc762fcee7a1c3b24648b8f0fcf4d20 255 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 39 254 30.299 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 RR42_RS15625 3cc762fcee7a1c3b24648b8f0fcf4d20 255 SUPERFAMILY SSF53335 31 254 2.01E-41 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS04895 001c15db3af9d9bcf98756ca4aed15e3 304 SMART SM00331 9 243 3.1E-14 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RR42_RS04895 001c15db3af9d9bcf98756ca4aed15e3 304 PANTHER PTHR13832 12 263 3.4E-33 T 23-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 RR42_RS04895 001c15db3af9d9bcf98756ca4aed15e3 304 Gene3D G3DSA:3.60.40.10 2 241 7.5E-51 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RR42_RS04895 001c15db3af9d9bcf98756ca4aed15e3 304 SUPERFAMILY SSF81606 1 243 1.19E-50 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RR42_RS04895 001c15db3af9d9bcf98756ca4aed15e3 304 PANTHER PTHR13832:SF278 12 263 3.4E-33 T 23-04-2016 RR42_RS04895 001c15db3af9d9bcf98756ca4aed15e3 304 SMART SM00332 1 241 1.6E-14 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RR42_RS04895 001c15db3af9d9bcf98756ca4aed15e3 304 Pfam PF13672 Protein phosphatase 2C 9 197 1.8E-12 T 23-04-2016 RR42_RS03295 d59b0663289a91007a34b9272512672f 475 Pfam PF08521 Two-component sensor kinase N-terminal 24 173 8.7E-39 T 23-04-2016 IPR013727 Two-component sensor kinase, N-terminal RR42_RS03295 d59b0663289a91007a34b9272512672f 475 PANTHER PTHR24423:SF474 1 8 6.3E-63 T 23-04-2016 RR42_RS03295 d59b0663289a91007a34b9272512672f 475 SUPERFAMILY SSF55874 307 472 4.06E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS03295 d59b0663289a91007a34b9272512672f 475 PANTHER PTHR24423 1 8 6.3E-63 T 23-04-2016 RR42_RS03295 d59b0663289a91007a34b9272512672f 475 Pfam PF00672 HAMP domain 178 245 7.2E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS03295 d59b0663289a91007a34b9272512672f 475 PANTHER PTHR24423:SF474 191 472 6.3E-63 T 23-04-2016 RR42_RS03295 d59b0663289a91007a34b9272512672f 475 SMART SM00387 358 475 7.4E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS03295 d59b0663289a91007a34b9272512672f 475 PANTHER PTHR24423 191 472 6.3E-63 T 23-04-2016 RR42_RS03295 d59b0663289a91007a34b9272512672f 475 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 313 9.6E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS03295 d59b0663289a91007a34b9272512672f 475 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 362 457 1.1E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS03295 d59b0663289a91007a34b9272512672f 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 409 1.8E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS03295 d59b0663289a91007a34b9272512672f 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 453 1.8E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS03295 d59b0663289a91007a34b9272512672f 475 Gene3D G3DSA:1.10.287.130 242 311 8.6E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS03295 d59b0663289a91007a34b9272512672f 475 SMART SM00388 250 315 1.1E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS03295 d59b0663289a91007a34b9272512672f 475 SUPERFAMILY SSF47384 233 315 6.87E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS03295 d59b0663289a91007a34b9272512672f 475 Gene3D G3DSA:3.30.565.10 322 472 4.5E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS10750 5c4d879693d2050d50a12a96a070833e 675 SUPERFAMILY SSF88659 513 586 4.58E-17 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS10750 5c4d879693d2050d50a12a96a070833e 675 PRINTS PR00046 Major sigma-70 factor signature 612 624 4.7E-30 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS10750 5c4d879693d2050d50a12a96a070833e 675 PRINTS PR00046 Major sigma-70 factor signature 488 496 4.7E-30 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS10750 5c4d879693d2050d50a12a96a070833e 675 PRINTS PR00046 Major sigma-70 factor signature 648 659 4.7E-30 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS10750 5c4d879693d2050d50a12a96a070833e 675 PRINTS PR00046 Major sigma-70 factor signature 464 477 4.7E-30 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS10750 5c4d879693d2050d50a12a96a070833e 675 PRINTS PR00046 Major sigma-70 factor signature 633 648 4.7E-30 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS10750 5c4d879693d2050d50a12a96a070833e 675 PANTHER PTHR30603:SF0 54 211 3.9E-202 T 23-04-2016 RR42_RS10750 5c4d879693d2050d50a12a96a070833e 675 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 52 673 37.292 T 23-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 RR42_RS10750 5c4d879693d2050d50a12a96a070833e 675 Pfam PF04542 Sigma-70 region 2 442 509 5.7E-19 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS10750 5c4d879693d2050d50a12a96a070833e 675 PANTHER PTHR30603 54 211 3.9E-202 T 23-04-2016 RR42_RS10750 5c4d879693d2050d50a12a96a070833e 675 Pfam PF03979 Sigma-70 factor, region 1.1 62 140 2.2E-19 T 23-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 RR42_RS10750 5c4d879693d2050d50a12a96a070833e 675 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 436 672 1.9E-112 T 23-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 RR42_RS10750 5c4d879693d2050d50a12a96a070833e 675 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 437 661 2.9E-36 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS10750 5c4d879693d2050d50a12a96a070833e 675 Pfam PF04539 Sigma-70 region 3 519 595 3.8E-25 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS10750 5c4d879693d2050d50a12a96a070833e 675 PANTHER PTHR30603 387 672 3.9E-202 T 23-04-2016 RR42_RS10750 5c4d879693d2050d50a12a96a070833e 675 Gene3D G3DSA:1.10.10.10 604 673 7.3E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS10750 5c4d879693d2050d50a12a96a070833e 675 Gene3D G3DSA:1.10.10.10 513 564 6.8E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS10750 5c4d879693d2050d50a12a96a070833e 675 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 633 659 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS10750 5c4d879693d2050d50a12a96a070833e 675 Gene3D G3DSA:1.10.601.10 171 509 7.3E-115 T 23-04-2016 RR42_RS10750 5c4d879693d2050d50a12a96a070833e 675 Pfam PF00140 Sigma-70 factor, region 1.2 157 188 1.7E-12 T 23-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS10750 5c4d879693d2050d50a12a96a070833e 675 PANTHER PTHR30603:SF0 387 672 3.9E-202 T 23-04-2016 RR42_RS10750 5c4d879693d2050d50a12a96a070833e 675 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 464 477 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS10750 5c4d879693d2050d50a12a96a070833e 675 Pfam PF04545 Sigma-70, region 4 609 661 1.8E-18 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS10750 5c4d879693d2050d50a12a96a070833e 675 SUPERFAMILY SSF88659 570 671 5.49E-28 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS10750 5c4d879693d2050d50a12a96a070833e 675 Pfam PF04546 Sigma-70, non-essential region 198 408 1.1E-54 T 23-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS10750 5c4d879693d2050d50a12a96a070833e 675 SUPERFAMILY SSF88946 174 507 6.59E-90 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS37375 1be0bf719ca081555f9959f9ce024a49 240 PANTHER PTHR11573 1 240 2.9E-112 T 23-04-2016 RR42_RS37375 1be0bf719ca081555f9959f9ce024a49 240 Pfam PF02867 Ribonucleotide reductase, barrel domain 1 240 9.3E-74 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS37375 1be0bf719ca081555f9959f9ce024a49 240 Gene3D G3DSA:3.20.70.20 230 239 4.2E-24 T 23-04-2016 RR42_RS37375 1be0bf719ca081555f9959f9ce024a49 240 Gene3D G3DSA:3.20.70.20 124 169 4.2E-24 T 23-04-2016 RR42_RS37375 1be0bf719ca081555f9959f9ce024a49 240 Gene3D G3DSA:3.20.70.20 1 68 4.2E-24 T 23-04-2016 RR42_RS37375 1be0bf719ca081555f9959f9ce024a49 240 SUPERFAMILY SSF51998 1 173 1.59E-67 T 23-04-2016 RR42_RS37375 1be0bf719ca081555f9959f9ce024a49 240 SUPERFAMILY SSF51998 204 240 1.59E-67 T 23-04-2016 RR42_RS37375 1be0bf719ca081555f9959f9ce024a49 240 PRINTS PR01183 Ribonucleotide reductase large chain signature 20 42 2.8E-24 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS37375 1be0bf719ca081555f9959f9ce024a49 240 PRINTS PR01183 Ribonucleotide reductase large chain signature 124 151 2.8E-24 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS37375 1be0bf719ca081555f9959f9ce024a49 240 PRINTS PR01183 Ribonucleotide reductase large chain signature 48 71 2.8E-24 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS37375 1be0bf719ca081555f9959f9ce024a49 240 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 113 135 - T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS06270 cec64f2b465e88caaab40f7c3324ee3d 375 PANTHER PTHR13096 1 262 3.8E-35 T 23-04-2016 RR42_RS06270 cec64f2b465e88caaab40f7c3324ee3d 375 SUPERFAMILY SSF51197 1 284 6.04E-69 T 23-04-2016 RR42_RS06270 cec64f2b465e88caaab40f7c3324ee3d 375 SMART SM00558 70 210 0.003 T 23-04-2016 IPR003347 JmjC domain RR42_RS06270 cec64f2b465e88caaab40f7c3324ee3d 375 Gene3D G3DSA:2.60.120.650 1 200 8.2E-39 T 23-04-2016 RR42_RS06270 cec64f2b465e88caaab40f7c3324ee3d 375 Pfam PF08007 Cupin superfamily protein 3 281 9.3E-91 T 23-04-2016 IPR003347 JmjC domain RR42_RS15945 572a36af727b88e7d2d450f69e697442 188 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 4 187 4.3E-49 T 23-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 RR42_RS15945 572a36af727b88e7d2d450f69e697442 188 Gene3D G3DSA:2.70.40.10 3 187 1.5E-68 T 23-04-2016 IPR029054 dUTPase-like RR42_RS15945 572a36af727b88e7d2d450f69e697442 188 Pfam PF00692 dUTPase 82 184 1.0E-6 T 23-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 RR42_RS15945 572a36af727b88e7d2d450f69e697442 188 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 188 28.375 T 23-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 RR42_RS15945 572a36af727b88e7d2d450f69e697442 188 PANTHER PTHR11241 1 187 1.3E-76 T 23-04-2016 RR42_RS15945 572a36af727b88e7d2d450f69e697442 188 SUPERFAMILY SSF51283 3 187 7.59E-53 T 23-04-2016 IPR029054 dUTPase-like RR42_RS15945 572a36af727b88e7d2d450f69e697442 188 PANTHER PTHR11241:SF1 1 187 1.3E-76 T 23-04-2016 RR42_RS04825 573ad1c79d39b402270fe8197eafe7ec 391 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS04825 573ad1c79d39b402270fe8197eafe7ec 391 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 19 366 3.0E-102 T 23-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 RR42_RS04825 573ad1c79d39b402270fe8197eafe7ec 391 Pfam PF00571 CBS domain 264 304 2.0E-7 T 23-04-2016 IPR000644 CBS domain RR42_RS04825 573ad1c79d39b402270fe8197eafe7ec 391 Pfam PF00571 CBS domain 313 366 8.9E-6 T 23-04-2016 IPR000644 CBS domain RR42_RS04825 573ad1c79d39b402270fe8197eafe7ec 391 PANTHER PTHR24220:SF350 3 290 2.9E-154 T 23-04-2016 RR42_RS04825 573ad1c79d39b402270fe8197eafe7ec 391 PANTHER PTHR24220 3 290 2.9E-154 T 23-04-2016 RR42_RS04825 573ad1c79d39b402270fe8197eafe7ec 391 SMART SM00116 261 309 4.7E-5 T 23-04-2016 IPR000644 CBS domain RR42_RS04825 573ad1c79d39b402270fe8197eafe7ec 391 SMART SM00116 318 366 2.6 T 23-04-2016 IPR000644 CBS domain RR42_RS04825 573ad1c79d39b402270fe8197eafe7ec 391 Gene3D G3DSA:3.10.580.10 262 366 7.2E-20 T 23-04-2016 RR42_RS04825 573ad1c79d39b402270fe8197eafe7ec 391 SMART SM00382 31 226 5.6E-20 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS04825 573ad1c79d39b402270fe8197eafe7ec 391 Gene3D G3DSA:3.40.50.300 1 243 8.0E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04825 573ad1c79d39b402270fe8197eafe7ec 391 SUPERFAMILY SSF54631 263 366 1.52E-19 T 23-04-2016 RR42_RS04825 573ad1c79d39b402270fe8197eafe7ec 391 Pfam PF00005 ABC transporter 23 168 1.1E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS04825 573ad1c79d39b402270fe8197eafe7ec 391 SUPERFAMILY SSF52540 1 247 1.18E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01370 389649aa820e83535974f95f7817491a 276 Gene3D G3DSA:3.40.1190.20 9 268 7.3E-102 T 23-04-2016 IPR029056 Ribokinase-like RR42_RS01370 389649aa820e83535974f95f7817491a 276 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 12 268 1.2E-95 T 23-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RR42_RS01370 389649aa820e83535974f95f7817491a 276 PANTHER PTHR20858:SF17 1 274 2.1E-121 T 23-04-2016 RR42_RS01370 389649aa820e83535974f95f7817491a 276 SUPERFAMILY SSF53613 7 270 6.55E-78 T 23-04-2016 IPR029056 Ribokinase-like RR42_RS01370 389649aa820e83535974f95f7817491a 276 PANTHER PTHR20858 1 274 2.1E-121 T 23-04-2016 RR42_RS01370 389649aa820e83535974f95f7817491a 276 Pfam PF08543 Phosphomethylpyrimidine kinase 18 267 9.5E-96 T 23-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 RR42_RS01875 53b2c456404a33cf12d03c5b54c85de0 420 SUPERFAMILY SSF46626 236 369 1.39E-23 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS01875 53b2c456404a33cf12d03c5b54c85de0 420 SUPERFAMILY SSF81464 31 125 1.31E-25 T 23-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RR42_RS01875 53b2c456404a33cf12d03c5b54c85de0 420 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 202 250 - T 23-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 RR42_RS01875 53b2c456404a33cf12d03c5b54c85de0 420 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 131 257 1.8E-39 T 23-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 RR42_RS01875 53b2c456404a33cf12d03c5b54c85de0 420 SUPERFAMILY SSF49503 128 271 7.05E-52 T 23-04-2016 IPR008972 Cupredoxin RR42_RS01875 53b2c456404a33cf12d03c5b54c85de0 420 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 44 266 8.5E-57 T 23-04-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 RR42_RS01875 53b2c456404a33cf12d03c5b54c85de0 420 PANTHER PTHR22888 37 272 2.2E-94 T 23-04-2016 RR42_RS01875 53b2c456404a33cf12d03c5b54c85de0 420 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 36 116 1.3E-13 T 23-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RR42_RS01875 53b2c456404a33cf12d03c5b54c85de0 420 PRINTS PR01166 Cytochrome c oxidase subunit II signature 93 105 4.7E-39 T 23-04-2016 RR42_RS01875 53b2c456404a33cf12d03c5b54c85de0 420 PRINTS PR01166 Cytochrome c oxidase subunit II signature 105 125 4.7E-39 T 23-04-2016 RR42_RS01875 53b2c456404a33cf12d03c5b54c85de0 420 PRINTS PR01166 Cytochrome c oxidase subunit II signature 221 238 4.7E-39 T 23-04-2016 RR42_RS01875 53b2c456404a33cf12d03c5b54c85de0 420 PRINTS PR01166 Cytochrome c oxidase subunit II signature 201 221 4.7E-39 T 23-04-2016 RR42_RS01875 53b2c456404a33cf12d03c5b54c85de0 420 PRINTS PR01166 Cytochrome c oxidase subunit II signature 177 198 4.7E-39 T 23-04-2016 RR42_RS01875 53b2c456404a33cf12d03c5b54c85de0 420 PRINTS PR01166 Cytochrome c oxidase subunit II signature 127 146 4.7E-39 T 23-04-2016 RR42_RS01875 53b2c456404a33cf12d03c5b54c85de0 420 PRINTS PR01166 Cytochrome c oxidase subunit II signature 239 256 4.7E-39 T 23-04-2016 RR42_RS01875 53b2c456404a33cf12d03c5b54c85de0 420 PANTHER PTHR22888:SF2 37 272 2.2E-94 T 23-04-2016 RR42_RS01875 53b2c456404a33cf12d03c5b54c85de0 420 Gene3D G3DSA:1.10.760.10 298 371 3.0E-24 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS01875 53b2c456404a33cf12d03c5b54c85de0 420 Gene3D G3DSA:1.10.287.90 36 121 2.0E-23 T 23-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RR42_RS01875 53b2c456404a33cf12d03c5b54c85de0 420 Gene3D G3DSA:2.60.40.420 122 297 5.2E-56 T 23-04-2016 IPR008972 Cupredoxin RR42_RS01875 53b2c456404a33cf12d03c5b54c85de0 420 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 290 359 9.3E-12 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS17705 ace93e8c3d4b201370df8673d652c454 304 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 296 2.3E-92 T 23-04-2016 RR42_RS17705 ace93e8c3d4b201370df8673d652c454 304 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 5 290 7.8E-69 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 RR42_RS17705 ace93e8c3d4b201370df8673d652c454 304 PANTHER PTHR18895:SF69 16 289 2.4E-91 T 23-04-2016 RR42_RS17705 ace93e8c3d4b201370df8673d652c454 304 PANTHER PTHR18895 16 289 2.4E-91 T 23-04-2016 RR42_RS17705 ace93e8c3d4b201370df8673d652c454 304 SUPERFAMILY SSF53335 69 275 8.74E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS17705 ace93e8c3d4b201370df8673d652c454 304 Gene3D G3DSA:3.40.50.150 110 291 3.4E-41 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS17705 ace93e8c3d4b201370df8673d652c454 304 PIRSF PIRSF000401 1 298 5.0E-98 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 RR42_RS17705 ace93e8c3d4b201370df8673d652c454 304 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 296 32.417 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 RR42_RS14810 e869d7582254cd00f4f293e7bf0638f5 496 Pfam PF00271 Helicase conserved C-terminal domain 252 358 5.1E-29 T 23-04-2016 IPR001650 Helicase, C-terminal RR42_RS14810 e869d7582254cd00f4f293e7bf0638f5 496 PANTHER PTHR24031 11 474 2.8E-179 T 23-04-2016 RR42_RS14810 e869d7582254cd00f4f293e7bf0638f5 496 Gene3D G3DSA:3.40.50.300 227 392 6.8E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14810 e869d7582254cd00f4f293e7bf0638f5 496 PANTHER PTHR24031:SF0 11 474 2.8E-179 T 23-04-2016 RR42_RS14810 e869d7582254cd00f4f293e7bf0638f5 496 Gene3D G3DSA:3.40.50.300 5 226 1.8E-86 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14810 e869d7582254cd00f4f293e7bf0638f5 496 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 168 176 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RR42_RS14810 e869d7582254cd00f4f293e7bf0638f5 496 SUPERFAMILY SSF52540 89 379 1.45E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14810 e869d7582254cd00f4f293e7bf0638f5 496 Pfam PF00270 DEAD/DEAH box helicase 37 211 6.3E-53 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RR42_RS14810 e869d7582254cd00f4f293e7bf0638f5 496 SMART SM00490 277 358 8.2E-34 T 23-04-2016 IPR001650 Helicase, C-terminal RR42_RS14810 e869d7582254cd00f4f293e7bf0638f5 496 SMART SM00487 32 237 2.8E-62 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RR42_RS09410 ed8e88240c533e6e60b770e9cc81d708 685 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 362 375 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RR42_RS09410 ed8e88240c533e6e60b770e9cc81d708 685 Gene3D G3DSA:3.40.50.300 337 511 3.0E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS09410 ed8e88240c533e6e60b770e9cc81d708 685 Pfam PF00158 Sigma-54 interaction domain 341 501 2.9E-60 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RR42_RS09410 ed8e88240c533e6e60b770e9cc81d708 685 Gene3D G3DSA:1.10.8.60 513 583 8.0E-16 T 23-04-2016 RR42_RS09410 ed8e88240c533e6e60b770e9cc81d708 685 SUPERFAMILY SSF46689 613 656 1.92E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS09410 ed8e88240c533e6e60b770e9cc81d708 685 Gene3D G3DSA:1.10.10.60 616 656 1.8E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS09410 ed8e88240c533e6e60b770e9cc81d708 685 PANTHER PTHR32071 327 667 8.0E-136 T 23-04-2016 RR42_RS09410 ed8e88240c533e6e60b770e9cc81d708 685 PANTHER PTHR32071:SF5 327 667 8.0E-136 T 23-04-2016 RR42_RS09410 ed8e88240c533e6e60b770e9cc81d708 685 Pfam PF02954 Bacterial regulatory protein, Fis family 616 654 6.4E-11 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS09410 ed8e88240c533e6e60b770e9cc81d708 685 SMART SM00382 358 502 1.2E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS09410 ed8e88240c533e6e60b770e9cc81d708 685 SUPERFAMILY SSF55781 69 209 1.54E-6 T 23-04-2016 IPR029016 GAF domain-like RR42_RS09410 ed8e88240c533e6e60b770e9cc81d708 685 SUPERFAMILY SSF52540 349 582 5.08E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS09410 ed8e88240c533e6e60b770e9cc81d708 685 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 425 440 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RR42_RS19020 f7830b1b3132a01346a74e51c0338fa0 177 PIRSF PIRSF016481 9 177 7.4E-38 T 23-04-2016 IPR007446 Pilus assembly protein PilP RR42_RS19020 f7830b1b3132a01346a74e51c0338fa0 177 Pfam PF04351 Pilus assembly protein, PilP 34 173 5.5E-40 T 23-04-2016 IPR007446 Pilus assembly protein PilP RR42_RS07330 1b7df89349e8b7bfc2315d1c375a0b8e 237 PANTHER PTHR11751:SF364 97 119 1.8E-25 T 23-04-2016 RR42_RS07330 1b7df89349e8b7bfc2315d1c375a0b8e 237 PANTHER PTHR11751:SF364 6 75 1.8E-25 T 23-04-2016 RR42_RS07330 1b7df89349e8b7bfc2315d1c375a0b8e 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 71 3.0E-19 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS07330 1b7df89349e8b7bfc2315d1c375a0b8e 237 SMART SM00345 13 72 1.2E-16 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS07330 1b7df89349e8b7bfc2315d1c375a0b8e 237 SUPERFAMILY SSF46785 4 76 8.4E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS07330 1b7df89349e8b7bfc2315d1c375a0b8e 237 Gene3D G3DSA:1.10.10.10 8 75 2.6E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS07330 1b7df89349e8b7bfc2315d1c375a0b8e 237 Pfam PF07702 UTRA domain 93 229 1.1E-30 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RR42_RS07330 1b7df89349e8b7bfc2315d1c375a0b8e 237 SMART SM00866 93 230 2.4E-30 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RR42_RS07330 1b7df89349e8b7bfc2315d1c375a0b8e 237 Gene3D G3DSA:3.40.1410.10 90 226 4.5E-42 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RR42_RS07330 1b7df89349e8b7bfc2315d1c375a0b8e 237 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 9 236 4.2E-79 T 23-04-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 UniPathway: UPA00379 RR42_RS07330 1b7df89349e8b7bfc2315d1c375a0b8e 237 SUPERFAMILY SSF64288 60 234 8.79E-40 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RR42_RS07330 1b7df89349e8b7bfc2315d1c375a0b8e 237 PANTHER PTHR11751 97 119 1.8E-25 T 23-04-2016 RR42_RS07330 1b7df89349e8b7bfc2315d1c375a0b8e 237 PANTHER PTHR11751 6 75 1.8E-25 T 23-04-2016 RR42_RS07330 1b7df89349e8b7bfc2315d1c375a0b8e 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.0E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS07330 1b7df89349e8b7bfc2315d1c375a0b8e 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.0E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS01260 418a63d100059e348e9d3504f4a14589 312 PANTHER PTHR30606 3 272 6.8E-43 T 23-04-2016 RR42_RS01260 418a63d100059e348e9d3504f4a14589 312 PIRSF PIRSF026649 1 281 9.6E-70 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RR42_RS01260 418a63d100059e348e9d3504f4a14589 312 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 3 272 3.7E-35 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RR42_RS04535 856b5c3eac8e4610e5422cb07fecd3b1 300 TIGRFAM TIGR01136 cysKM: cysteine synthase 6 298 1.7E-115 T 23-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 RR42_RS04535 856b5c3eac8e4610e5422cb07fecd3b1 300 Gene3D G3DSA:3.40.50.1100 1 45 1.3E-79 T 23-04-2016 RR42_RS04535 856b5c3eac8e4610e5422cb07fecd3b1 300 Gene3D G3DSA:3.40.50.1100 152 299 1.3E-79 T 23-04-2016 RR42_RS04535 856b5c3eac8e4610e5422cb07fecd3b1 300 PANTHER PTHR10314 1 298 4.7E-159 T 23-04-2016 RR42_RS04535 856b5c3eac8e4610e5422cb07fecd3b1 300 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 36 54 - T 23-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 RR42_RS04535 856b5c3eac8e4610e5422cb07fecd3b1 300 TIGRFAM TIGR01138 cysM: cysteine synthase B 5 298 1.4E-134 T 23-04-2016 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 RR42_RS04535 856b5c3eac8e4610e5422cb07fecd3b1 300 Gene3D G3DSA:3.40.50.1100 46 146 2.6E-37 T 23-04-2016 RR42_RS04535 856b5c3eac8e4610e5422cb07fecd3b1 300 SUPERFAMILY SSF53686 2 298 1.17E-88 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RR42_RS04535 856b5c3eac8e4610e5422cb07fecd3b1 300 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 287 4.0E-64 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RR42_RS04535 856b5c3eac8e4610e5422cb07fecd3b1 300 PANTHER PTHR10314:SF100 1 298 4.7E-159 T 23-04-2016 RR42_RS15225 c1bc518265b5647bf6ed6fa379420e7c 72 PANTHER PTHR32319 8 70 6.6E-18 T 23-04-2016 RR42_RS15225 c1bc518265b5647bf6ed6fa379420e7c 72 Pfam PF13275 S4 domain 6 70 2.0E-23 T 23-04-2016 RR42_RS15225 c1bc518265b5647bf6ed6fa379420e7c 72 SUPERFAMILY SSF55174 3 70 1.83E-18 T 23-04-2016 RR42_RS15225 c1bc518265b5647bf6ed6fa379420e7c 72 Gene3D G3DSA:3.10.290.10 1 70 1.0E-25 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RR42_RS02015 67f2d1a56895482027b8649fed9d1844 317 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 6 315 48.014 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RR42_RS02015 67f2d1a56895482027b8649fed9d1844 317 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 131 146 - T 23-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 RR42_RS02015 67f2d1a56895482027b8649fed9d1844 317 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 6 123 1.0E-48 T 23-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RR42_RS02015 67f2d1a56895482027b8649fed9d1844 317 SUPERFAMILY SSF53271 71 304 3.25E-63 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS02015 67f2d1a56895482027b8649fed9d1844 317 Pfam PF14572 Phosphoribosyl synthetase-associated domain 205 314 1.1E-27 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RR42_RS02015 67f2d1a56895482027b8649fed9d1844 317 Gene3D G3DSA:3.40.50.2020 3 161 2.2E-75 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS02015 67f2d1a56895482027b8649fed9d1844 317 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 7 314 8.5E-121 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RR42_RS02015 67f2d1a56895482027b8649fed9d1844 317 SMART SM01400 6 123 2.7E-78 T 23-04-2016 RR42_RS02015 67f2d1a56895482027b8649fed9d1844 317 Gene3D G3DSA:3.40.50.2020 162 289 3.4E-53 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS02015 67f2d1a56895482027b8649fed9d1844 317 PANTHER PTHR10210:SF41 1 314 2.3E-176 T 23-04-2016 RR42_RS02015 67f2d1a56895482027b8649fed9d1844 317 PANTHER PTHR10210 1 314 2.3E-176 T 23-04-2016 RR42_RS14310 fdd67e3a96c014dab3a4900c01af2681 691 Gene3D G3DSA:3.40.50.300 20 263 2.9E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14310 fdd67e3a96c014dab3a4900c01af2681 691 Pfam PF12704 MacB-like periplasmic core domain 317 535 1.3E-32 T 23-04-2016 IPR025857 MacB-like periplasmic core domain RR42_RS14310 fdd67e3a96c014dab3a4900c01af2681 691 PANTHER PTHR24220:SF86 641 648 2.1E-92 T 23-04-2016 RR42_RS14310 fdd67e3a96c014dab3a4900c01af2681 691 PANTHER PTHR24220:SF86 24 263 2.1E-92 T 23-04-2016 RR42_RS14310 fdd67e3a96c014dab3a4900c01af2681 691 SUPERFAMILY SSF52540 23 254 2.15E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14310 fdd67e3a96c014dab3a4900c01af2681 691 Pfam PF00005 ABC transporter 52 200 1.4E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS14310 fdd67e3a96c014dab3a4900c01af2681 691 Pfam PF02687 FtsX-like permease family 572 684 2.0E-17 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RR42_RS14310 fdd67e3a96c014dab3a4900c01af2681 691 SMART SM00382 61 248 9.7E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS14310 fdd67e3a96c014dab3a4900c01af2681 691 PANTHER PTHR24220 641 648 2.1E-92 T 23-04-2016 RR42_RS14310 fdd67e3a96c014dab3a4900c01af2681 691 PANTHER PTHR24220 24 263 2.1E-92 T 23-04-2016 RR42_RS14310 fdd67e3a96c014dab3a4900c01af2681 691 ProSitePatterns PS00211 ABC transporters family signature. 173 187 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS07295 49587647dea85abe82c01fbe8ddfb049 302 Gene3D G3DSA:3.40.190.10 89 180 7.3E-16 T 23-04-2016 RR42_RS07295 49587647dea85abe82c01fbe8ddfb049 302 Pfam PF03466 LysR substrate binding domain 89 293 4.8E-35 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS07295 49587647dea85abe82c01fbe8ddfb049 302 SUPERFAMILY SSF46785 1 84 4.63E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS07295 49587647dea85abe82c01fbe8ddfb049 302 Gene3D G3DSA:3.40.190.10 181 261 4.0E-19 T 23-04-2016 RR42_RS07295 49587647dea85abe82c01fbe8ddfb049 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 5.7E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS07295 49587647dea85abe82c01fbe8ddfb049 302 SUPERFAMILY SSF53850 90 294 5.43E-35 T 23-04-2016 RR42_RS07295 49587647dea85abe82c01fbe8ddfb049 302 PANTHER PTHR30126:SF34 1 292 2.6E-64 T 23-04-2016 RR42_RS07295 49587647dea85abe82c01fbe8ddfb049 302 PANTHER PTHR30126 1 292 2.6E-64 T 23-04-2016 RR42_RS07295 49587647dea85abe82c01fbe8ddfb049 302 Gene3D G3DSA:1.10.10.10 1 87 4.7E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS11355 15d89a30a6c35ee41634f8bd2b7c380e 433 PANTHER PTHR11662 9 432 2.2E-86 T 23-04-2016 RR42_RS11355 15d89a30a6c35ee41634f8bd2b7c380e 433 Gene3D G3DSA:1.20.1250.20 11 199 6.8E-30 T 23-04-2016 RR42_RS11355 15d89a30a6c35ee41634f8bd2b7c380e 433 SUPERFAMILY SSF103473 8 404 4.32E-60 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS11355 15d89a30a6c35ee41634f8bd2b7c380e 433 Gene3D G3DSA:1.20.1250.20 207 400 4.2E-16 T 23-04-2016 RR42_RS11355 15d89a30a6c35ee41634f8bd2b7c380e 433 PANTHER PTHR11662:SF277 9 432 2.2E-86 T 23-04-2016 RR42_RS11355 15d89a30a6c35ee41634f8bd2b7c380e 433 Pfam PF07690 Major Facilitator Superfamily 17 322 5.2E-33 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS01130 b8c4774aca1fedd7230803ac8427272c 326 TIGRFAM TIGR01993 Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 28 211 2.9E-43 T 23-04-2016 IPR010237 Pyrimidine 5-nucleotidase RR42_RS01130 b8c4774aca1fedd7230803ac8427272c 326 PANTHER PTHR12725 10 220 3.0E-17 T 23-04-2016 RR42_RS01130 b8c4774aca1fedd7230803ac8427272c 326 Gene3D G3DSA:3.40.50.1000 29 225 9.9E-20 T 23-04-2016 IPR023214 HAD-like domain RR42_RS01130 b8c4774aca1fedd7230803ac8427272c 326 Pfam PF13419 Haloacid dehalogenase-like hydrolase 31 213 2.3E-12 T 23-04-2016 IPR023214 HAD-like domain RR42_RS01130 b8c4774aca1fedd7230803ac8427272c 326 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 71 213 9.7E-8 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS01130 b8c4774aca1fedd7230803ac8427272c 326 SUPERFAMILY SSF56784 29 217 2.31E-27 T 23-04-2016 IPR023214 HAD-like domain RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 Gene3D G3DSA:3.50.50.60 394 463 1.9E-60 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 Gene3D G3DSA:3.50.50.60 120 271 1.9E-60 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 Gene3D G3DSA:2.40.50.100 4 79 2.3E-20 T 23-04-2016 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 465 486 3.5E-68 T 23-04-2016 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 122 144 3.5E-68 T 23-04-2016 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 530 545 3.5E-68 T 23-04-2016 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 437 3.5E-68 T 23-04-2016 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 170 3.5E-68 T 23-04-2016 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 323 3.5E-68 T 23-04-2016 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 387 401 3.5E-68 T 23-04-2016 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 552 572 3.5E-68 T 23-04-2016 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 272 3.5E-68 T 23-04-2016 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 Gene3D G3DSA:3.30.390.30 464 580 3.3E-44 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 SUPERFAMILY SSF55424 465 587 7.9E-38 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 415 437 4.1E-39 T 23-04-2016 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 316 4.1E-39 T 23-04-2016 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 278 4.1E-39 T 23-04-2016 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 123 142 4.1E-39 T 23-04-2016 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 386 402 4.1E-39 T 23-04-2016 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 SUPERFAMILY SSF51230 2 96 2.05E-22 T 23-04-2016 IPR011053 Single hybrid motif RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 156 166 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 SUPERFAMILY SSF51905 118 459 2.53E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 122 450 1.9E-56 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 469 577 4.0E-32 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 Gene3D G3DSA:3.50.50.60 277 393 7.9E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 PANTHER PTHR22912 107 236 1.1E-256 T 23-04-2016 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 PANTHER PTHR22912 258 581 1.1E-256 T 23-04-2016 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 121 579 3.0E-142 T 23-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 Pfam PF00364 Biotin-requiring enzyme 5 76 5.2E-20 T 23-04-2016 IPR000089 Biotin/lipoyl attachment RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 PANTHER PTHR22912:SF160 107 236 1.1E-256 T 23-04-2016 RR42_RS07380 120089d2f1546937aa15da3f8c671a45 594 PANTHER PTHR22912:SF160 258 581 1.1E-256 T 23-04-2016 RR42_RS03805 dda264b6b18f5b5ef44f826989b92ea3 313 Pfam PF01515 Phosphate acetyl/butaryl transferase 83 298 3.9E-45 T 23-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 RR42_RS03805 dda264b6b18f5b5ef44f826989b92ea3 313 PANTHER PTHR23406:SF1 161 301 2.4E-16 T 23-04-2016 RR42_RS03805 dda264b6b18f5b5ef44f826989b92ea3 313 Gene3D G3DSA:3.40.50.10750 117 274 1.6E-50 T 23-04-2016 RR42_RS03805 dda264b6b18f5b5ef44f826989b92ea3 313 PIRSF PIRSF000428 7 305 8.5E-87 T 23-04-2016 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 RR42_RS03805 dda264b6b18f5b5ef44f826989b92ea3 313 PANTHER PTHR23406 161 301 2.4E-16 T 23-04-2016 RR42_RS03805 dda264b6b18f5b5ef44f826989b92ea3 313 SUPERFAMILY SSF53659 19 301 4.93E-67 T 23-04-2016 RR42_RS00550 34260b021e43b120a854037b28d968a1 310 PANTHER PTHR34595 1 307 1.2E-96 T 23-04-2016 RR42_RS00550 34260b021e43b120a854037b28d968a1 310 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 306 6.3E-102 T 23-04-2016 IPR007296 Domain of unknown function DUF403 RR42_RS06275 9c6dd414478db54e47c8f208dc49d16d 177 PANTHER PTHR10516:SF316 130 170 1.3E-18 T 23-04-2016 RR42_RS06275 9c6dd414478db54e47c8f208dc49d16d 177 PANTHER PTHR10516:SF316 1 82 1.3E-18 T 23-04-2016 RR42_RS06275 9c6dd414478db54e47c8f208dc49d16d 177 SUPERFAMILY SSF54534 2 141 2.36E-27 T 23-04-2016 RR42_RS06275 9c6dd414478db54e47c8f208dc49d16d 177 PANTHER PTHR10516 130 170 1.3E-18 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RR42_RS06275 9c6dd414478db54e47c8f208dc49d16d 177 PANTHER PTHR10516 1 82 1.3E-18 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RR42_RS06275 9c6dd414478db54e47c8f208dc49d16d 177 Gene3D G3DSA:3.10.50.40 123 142 1.4E-7 T 23-04-2016 RR42_RS06275 9c6dd414478db54e47c8f208dc49d16d 177 Gene3D G3DSA:3.10.50.40 3 68 1.4E-7 T 23-04-2016 RR42_RS33855 56d613b968418e6eaacd8ddc426cef1d 222 PANTHER PTHR23115 14 222 1.4E-87 T 23-04-2016 RR42_RS33855 56d613b968418e6eaacd8ddc426cef1d 222 Pfam PF03144 Elongation factor Tu domain 2 57 127 9.9E-12 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RR42_RS33855 56d613b968418e6eaacd8ddc426cef1d 222 Gene3D G3DSA:2.40.30.10 45 142 3.1E-26 T 23-04-2016 RR42_RS33855 56d613b968418e6eaacd8ddc426cef1d 222 Gene3D G3DSA:3.40.50.300 8 44 7.9E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS33855 56d613b968418e6eaacd8ddc426cef1d 222 Gene3D G3DSA:3.30.70.870 143 221 1.1E-26 T 23-04-2016 RR42_RS33855 56d613b968418e6eaacd8ddc426cef1d 222 PANTHER PTHR23115:SF175 14 222 1.4E-87 T 23-04-2016 RR42_RS33855 56d613b968418e6eaacd8ddc426cef1d 222 SUPERFAMILY SSF50447 17 140 1.88E-30 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RR42_RS33855 56d613b968418e6eaacd8ddc426cef1d 222 SUPERFAMILY SSF54980 144 222 1.98E-18 T 23-04-2016 IPR009022 Elongation factor G, III-V domain RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 SMART SM00912 109 230 3.7E-25 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 Pfam PF05594 Haemagluttinin repeat 873 903 3.3 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 Pfam PF05594 Haemagluttinin repeat 658 728 4.2 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 Pfam PF05594 Haemagluttinin repeat 1874 1905 110.0 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 Pfam PF05594 Haemagluttinin repeat 328 388 0.32 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 Pfam PF05594 Haemagluttinin repeat 807 860 170.0 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 Pfam PF05594 Haemagluttinin repeat 1409 1458 0.21 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 Pfam PF05594 Haemagluttinin repeat 1318 1371 3.3E-4 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 Pfam PF05594 Haemagluttinin repeat 1020 1081 0.075 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 Pfam PF05594 Haemagluttinin repeat 415 481 85.0 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 Pfam PF05594 Haemagluttinin repeat 949 1008 3.4E-4 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 Pfam PF05594 Haemagluttinin repeat 1197 1256 1.2E-4 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 PANTHER PTHR32093 45 227 4.2E-29 T 23-04-2016 RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 Pfam PF05860 haemagglutination activity domain 109 227 1.8E-21 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 128 224 1.2E-9 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 818 853 0.45 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 977 1008 0.013 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1409 1448 0.0041 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1202 1240 2.1E-6 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1871 1906 0.04 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1513 1552 0.11 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 943 977 0.14 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1429 1468 9.9E-4 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1037 1072 0.54 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 768 800 0.36 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1020 1052 0.0078 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1331 1371 2.0E-4 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 800 837 0.017 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 SUPERFAMILY SSF51126 107 408 2.2E-33 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 Gene3D G3DSA:2.160.20.10 829 1009 8.0E-4 T 23-04-2016 IPR012334 Pectin lyase fold RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 Gene3D G3DSA:2.160.20.10 1310 1371 6.3E-4 T 23-04-2016 IPR012334 Pectin lyase fold RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 Gene3D G3DSA:2.160.20.10 1409 1443 6.3E-4 T 23-04-2016 IPR012334 Pectin lyase fold RR42_RS00150 33c66b53fe3b39a3dc71461679cefeb6 2303 Gene3D G3DSA:2.160.20.10 109 422 3.1E-63 T 23-04-2016 IPR012334 Pectin lyase fold RR42_RS14965 50ef8e5ec0340a80f6a18469a3ebd66c 758 SUPERFAMILY SSF88946 251 590 2.67E-102 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14965 50ef8e5ec0340a80f6a18469a3ebd66c 758 Pfam PF04542 Sigma-70 region 2 525 592 8.5E-21 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14965 50ef8e5ec0340a80f6a18469a3ebd66c 758 Pfam PF03979 Sigma-70 factor, region 1.1 139 217 1.1E-28 T 23-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 RR42_RS14965 50ef8e5ec0340a80f6a18469a3ebd66c 758 Gene3D G3DSA:1.10.10.10 596 647 5.7E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS14965 50ef8e5ec0340a80f6a18469a3ebd66c 758 PANTHER PTHR30603:SF0 133 288 1.9E-224 T 23-04-2016 RR42_RS14965 50ef8e5ec0340a80f6a18469a3ebd66c 758 Gene3D G3DSA:1.10.601.10 248 592 3.8E-129 T 23-04-2016 RR42_RS14965 50ef8e5ec0340a80f6a18469a3ebd66c 758 PANTHER PTHR30603 133 288 1.9E-224 T 23-04-2016 RR42_RS14965 50ef8e5ec0340a80f6a18469a3ebd66c 758 Pfam PF04546 Sigma-70, non-essential region 275 492 2.4E-67 T 23-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14965 50ef8e5ec0340a80f6a18469a3ebd66c 758 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 519 755 4.8E-119 T 23-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 RR42_RS14965 50ef8e5ec0340a80f6a18469a3ebd66c 758 SUPERFAMILY SSF88659 653 754 1.79E-27 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14965 50ef8e5ec0340a80f6a18469a3ebd66c 758 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 130 756 43.004 T 23-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 RR42_RS14965 50ef8e5ec0340a80f6a18469a3ebd66c 758 Gene3D G3DSA:1.10.10.10 686 756 4.5E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS14965 50ef8e5ec0340a80f6a18469a3ebd66c 758 SUPERFAMILY SSF88659 596 669 1.23E-18 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14965 50ef8e5ec0340a80f6a18469a3ebd66c 758 Pfam PF00140 Sigma-70 factor, region 1.2 234 266 7.6E-14 T 23-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14965 50ef8e5ec0340a80f6a18469a3ebd66c 758 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 547 560 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14965 50ef8e5ec0340a80f6a18469a3ebd66c 758 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 716 742 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14965 50ef8e5ec0340a80f6a18469a3ebd66c 758 Pfam PF04545 Sigma-70, region 4 691 744 3.5E-19 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14965 50ef8e5ec0340a80f6a18469a3ebd66c 758 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 519 744 4.1E-39 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14965 50ef8e5ec0340a80f6a18469a3ebd66c 758 PRINTS PR00046 Major sigma-70 factor signature 571 579 7.9E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14965 50ef8e5ec0340a80f6a18469a3ebd66c 758 PRINTS PR00046 Major sigma-70 factor signature 695 707 7.9E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14965 50ef8e5ec0340a80f6a18469a3ebd66c 758 PRINTS PR00046 Major sigma-70 factor signature 731 742 7.9E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14965 50ef8e5ec0340a80f6a18469a3ebd66c 758 PRINTS PR00046 Major sigma-70 factor signature 716 731 7.9E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14965 50ef8e5ec0340a80f6a18469a3ebd66c 758 PRINTS PR00046 Major sigma-70 factor signature 547 560 7.9E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14965 50ef8e5ec0340a80f6a18469a3ebd66c 758 PANTHER PTHR30603:SF0 470 756 1.9E-224 T 23-04-2016 RR42_RS14965 50ef8e5ec0340a80f6a18469a3ebd66c 758 Pfam PF04539 Sigma-70 region 3 602 678 2.6E-25 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14965 50ef8e5ec0340a80f6a18469a3ebd66c 758 PANTHER PTHR30603 470 756 1.9E-224 T 23-04-2016 RR42_RS20105 91e541eee8edee68165b66239839f4bc 404 PANTHER PTHR32507 1 398 2.9E-13 T 23-04-2016 RR42_RS20105 91e541eee8edee68165b66239839f4bc 404 Pfam PF00999 Sodium/hydrogen exchanger family 21 384 1.1E-24 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RR42_RS04355 36a6d7ee3a51512ea6fa2abffe17702d 459 Gene3D G3DSA:1.10.3710.10 342 437 9.5E-32 T 23-04-2016 RR42_RS04355 36a6d7ee3a51512ea6fa2abffe17702d 459 SMART SM00382 50 166 1.4E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS04355 36a6d7ee3a51512ea6fa2abffe17702d 459 Gene3D G3DSA:1.10.8.60 155 216 8.9E-9 T 23-04-2016 RR42_RS04355 36a6d7ee3a51512ea6fa2abffe17702d 459 Pfam PF16193 AAA C-terminal domain 185 260 2.5E-21 T 23-04-2016 IPR032423 AAA ATPase, C-terminal domain RR42_RS04355 36a6d7ee3a51512ea6fa2abffe17702d 459 Gene3D G3DSA:3.40.50.300 11 154 1.3E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04355 36a6d7ee3a51512ea6fa2abffe17702d 459 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 160 8.8E-13 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RR42_RS04355 36a6d7ee3a51512ea6fa2abffe17702d 459 SUPERFAMILY SSF48019 245 427 3.57E-71 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 RR42_RS04355 36a6d7ee3a51512ea6fa2abffe17702d 459 PANTHER PTHR13779 12 438 9.0E-183 T 23-04-2016 RR42_RS04355 36a6d7ee3a51512ea6fa2abffe17702d 459 PANTHER PTHR13779:SF7 12 438 9.0E-183 T 23-04-2016 RR42_RS04355 36a6d7ee3a51512ea6fa2abffe17702d 459 Gene3D G3DSA:1.20.272.10 242 340 4.8E-43 T 23-04-2016 RR42_RS04355 36a6d7ee3a51512ea6fa2abffe17702d 459 SUPERFAMILY SSF52540 11 229 2.78E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04355 36a6d7ee3a51512ea6fa2abffe17702d 459 Pfam PF12002 MgsA AAA+ ATPase C terminal 261 427 4.5E-65 T 23-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal RR42_RS19780 7e5798e5518b79f79e2f6a8bee9ee55f 422 Gene3D G3DSA:3.40.630.10 23 218 3.1E-49 T 23-04-2016 RR42_RS19780 7e5798e5518b79f79e2f6a8bee9ee55f 422 Gene3D G3DSA:3.40.630.10 358 421 3.1E-49 T 23-04-2016 RR42_RS19780 7e5798e5518b79f79e2f6a8bee9ee55f 422 Gene3D G3DSA:3.30.70.360 219 325 2.7E-27 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS19780 7e5798e5518b79f79e2f6a8bee9ee55f 422 SUPERFAMILY SSF55031 210 329 2.69E-25 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS19780 7e5798e5518b79f79e2f6a8bee9ee55f 422 PANTHER PTHR11014 14 421 1.4E-54 T 23-04-2016 RR42_RS19780 7e5798e5518b79f79e2f6a8bee9ee55f 422 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 96 105 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RR42_RS19780 7e5798e5518b79f79e2f6a8bee9ee55f 422 Pfam PF01546 Peptidase family M20/M25/M40 98 417 5.6E-27 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RR42_RS19780 7e5798e5518b79f79e2f6a8bee9ee55f 422 SUPERFAMILY SSF53187 13 209 2.32E-47 T 23-04-2016 RR42_RS19780 7e5798e5518b79f79e2f6a8bee9ee55f 422 SUPERFAMILY SSF53187 334 420 2.32E-47 T 23-04-2016 RR42_RS19780 7e5798e5518b79f79e2f6a8bee9ee55f 422 Pfam PF07687 Peptidase dimerisation domain 207 316 5.3E-19 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS03795 5b32a4f62dd2dd8d60b3f43c7b448dcb 263 SUPERFAMILY SSF52799 22 256 2.26E-43 T 23-04-2016 IPR029021 Protein-tyrosine phosphatase-like RR42_RS03795 5b32a4f62dd2dd8d60b3f43c7b448dcb 263 Pfam PF13350 Tyrosine phosphatase family 22 256 3.2E-56 T 23-04-2016 IPR026893 Tyrosine/serine-protein phosphatase IphP-type RR42_RS03795 5b32a4f62dd2dd8d60b3f43c7b448dcb 263 PANTHER PTHR31126 21 100 5.0E-36 T 23-04-2016 RR42_RS03795 5b32a4f62dd2dd8d60b3f43c7b448dcb 263 PANTHER PTHR31126 120 260 5.0E-36 T 23-04-2016 RR42_RS03795 5b32a4f62dd2dd8d60b3f43c7b448dcb 263 PANTHER PTHR31126:SF21 21 100 5.0E-36 T 23-04-2016 RR42_RS03795 5b32a4f62dd2dd8d60b3f43c7b448dcb 263 PANTHER PTHR31126:SF21 120 260 5.0E-36 T 23-04-2016 RR42_RS03795 5b32a4f62dd2dd8d60b3f43c7b448dcb 263 Gene3D G3DSA:3.90.190.10 24 199 1.3E-13 T 23-04-2016 IPR029021 Protein-tyrosine phosphatase-like RR42_RS18595 dd1944f681f80fd3cdc214d7708dbf8b 440 PANTHER PTHR30061:SF1 1 439 3.2E-58 T 23-04-2016 RR42_RS18595 dd1944f681f80fd3cdc214d7708dbf8b 440 Gene3D G3DSA:3.40.190.10 54 172 3.8E-10 T 23-04-2016 RR42_RS18595 dd1944f681f80fd3cdc214d7708dbf8b 440 Gene3D G3DSA:3.40.190.10 173 359 1.9E-29 T 23-04-2016 RR42_RS18595 dd1944f681f80fd3cdc214d7708dbf8b 440 Pfam PF13416 Bacterial extracellular solute-binding protein 67 377 6.8E-33 T 23-04-2016 RR42_RS18595 dd1944f681f80fd3cdc214d7708dbf8b 440 PANTHER PTHR30061 1 439 3.2E-58 T 23-04-2016 RR42_RS18595 dd1944f681f80fd3cdc214d7708dbf8b 440 SUPERFAMILY SSF53850 45 439 5.16E-53 T 23-04-2016 RR42_RS10520 5cad244897259ac4ff5237ce66c71bc9 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 7.8E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10520 5cad244897259ac4ff5237ce66c71bc9 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 7.8E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10520 5cad244897259ac4ff5237ce66c71bc9 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 7.8E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10520 5cad244897259ac4ff5237ce66c71bc9 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 9.5E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10520 5cad244897259ac4ff5237ce66c71bc9 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 9.5E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10520 5cad244897259ac4ff5237ce66c71bc9 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 9.5E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10520 5cad244897259ac4ff5237ce66c71bc9 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 9.5E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10520 5cad244897259ac4ff5237ce66c71bc9 252 SUPERFAMILY SSF51735 3 232 5.56E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10520 5cad244897259ac4ff5237ce66c71bc9 252 PANTHER PTHR24322:SF513 157 188 1.1E-43 T 23-04-2016 RR42_RS10520 5cad244897259ac4ff5237ce66c71bc9 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RR42_RS10520 5cad244897259ac4ff5237ce66c71bc9 252 Pfam PF00106 short chain dehydrogenase 6 198 9.7E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10520 5cad244897259ac4ff5237ce66c71bc9 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 188 0.0018 T 23-04-2016 RR42_RS10520 5cad244897259ac4ff5237ce66c71bc9 252 PANTHER PTHR24322 10 141 1.1E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10520 5cad244897259ac4ff5237ce66c71bc9 252 PANTHER PTHR24322 157 188 1.1E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10520 5cad244897259ac4ff5237ce66c71bc9 252 PANTHER PTHR24322:SF513 10 141 1.1E-43 T 23-04-2016 RR42_RS10520 5cad244897259ac4ff5237ce66c71bc9 252 Gene3D G3DSA:3.40.50.720 5 231 1.1E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS18270 cfa9f0e7747199f4276386711a622afa 389 PANTHER PTHR30124 127 389 4.1E-99 T 23-04-2016 RR42_RS18270 cfa9f0e7747199f4276386711a622afa 389 PANTHER PTHR30124:SF0 127 389 4.1E-99 T 23-04-2016 RR42_RS18270 cfa9f0e7747199f4276386711a622afa 389 SMART SM00925 159 291 2.8E-71 T 23-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 RR42_RS18270 cfa9f0e7747199f4276386711a622afa 389 Pfam PF03562 MltA specific insert domain 85 291 1.2E-67 T 23-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 RR42_RS18270 cfa9f0e7747199f4276386711a622afa 389 Gene3D G3DSA:2.40.40.10 201 388 3.6E-58 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RR42_RS18270 cfa9f0e7747199f4276386711a622afa 389 Gene3D G3DSA:2.40.40.10 75 181 3.5E-27 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RR42_RS18270 cfa9f0e7747199f4276386711a622afa 389 SUPERFAMILY SSF50685 74 388 1.01E-124 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RR42_RS18270 cfa9f0e7747199f4276386711a622afa 389 Pfam PF06725 3D domain 312 385 4.0E-24 T 23-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 RR42_RS10955 185fa145d79e22ee3a6bdbc725dde975 250 Gene3D G3DSA:1.20.120.530 91 230 4.4E-29 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS10955 185fa145d79e22ee3a6bdbc725dde975 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 9.0E-22 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS10955 185fa145d79e22ee3a6bdbc725dde975 250 Gene3D G3DSA:1.10.10.10 7 76 4.0E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS10955 185fa145d79e22ee3a6bdbc725dde975 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 3.1E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS10955 185fa145d79e22ee3a6bdbc725dde975 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 3.1E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS10955 185fa145d79e22ee3a6bdbc725dde975 250 SMART SM00895 97 223 9.9E-20 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS10955 185fa145d79e22ee3a6bdbc725dde975 250 SMART SM00345 14 73 3.6E-23 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS10955 185fa145d79e22ee3a6bdbc725dde975 250 PANTHER PTHR11751 9 113 3.4E-28 T 23-04-2016 RR42_RS10955 185fa145d79e22ee3a6bdbc725dde975 250 SUPERFAMILY SSF46785 4 77 2.53E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS10955 185fa145d79e22ee3a6bdbc725dde975 250 Pfam PF07729 FCD domain 97 221 1.2E-22 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS10955 185fa145d79e22ee3a6bdbc725dde975 250 SUPERFAMILY SSF48008 93 228 5.23E-26 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS13065 2ef8e347af279ed5b72934ec1eb24fa2 863 PANTHER PTHR23355 2 579 6.8E-243 T 23-04-2016 RR42_RS13065 2ef8e347af279ed5b72934ec1eb24fa2 863 PANTHER PTHR23355 614 746 6.8E-243 T 23-04-2016 RR42_RS13065 2ef8e347af279ed5b72934ec1eb24fa2 863 SUPERFAMILY SSF50249 56 136 3.67E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS13065 2ef8e347af279ed5b72934ec1eb24fa2 863 Pfam PF08206 Ribonuclease B OB domain 76 133 4.4E-22 T 23-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain RR42_RS13065 2ef8e347af279ed5b72934ec1eb24fa2 863 SUPERFAMILY SSF50249 663 743 2.11E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS13065 2ef8e347af279ed5b72934ec1eb24fa2 863 SUPERFAMILY SSF50249 527 582 1.09E-143 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS13065 2ef8e347af279ed5b72934ec1eb24fa2 863 SUPERFAMILY SSF50249 621 661 1.09E-143 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS13065 2ef8e347af279ed5b72934ec1eb24fa2 863 SUPERFAMILY SSF50249 176 491 1.09E-143 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS13065 2ef8e347af279ed5b72934ec1eb24fa2 863 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 63 744 2.3E-213 T 23-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 RR42_RS13065 2ef8e347af279ed5b72934ec1eb24fa2 863 Pfam PF00773 RNB domain 249 580 1.3E-105 T 23-04-2016 RR42_RS13065 2ef8e347af279ed5b72934ec1eb24fa2 863 TIGRFAM TIGR02063 RNase_R: ribonuclease R 9 592 3.5E-213 T 23-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 RR42_RS13065 2ef8e347af279ed5b72934ec1eb24fa2 863 SMART SM00357 75 134 1.6E-11 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 RR42_RS13065 2ef8e347af279ed5b72934ec1eb24fa2 863 SMART SM00955 249 581 2.0E-187 T 23-04-2016 RR42_RS13065 2ef8e347af279ed5b72934ec1eb24fa2 863 Gene3D G3DSA:1.10.10.10 12 67 8.3E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS13065 2ef8e347af279ed5b72934ec1eb24fa2 863 ProSitePatterns PS01175 Ribonuclease II family signature. 548 572 - T 23-04-2016 IPR022966 Ribonuclease II/R, conserved site RR42_RS13065 2ef8e347af279ed5b72934ec1eb24fa2 863 Hamap MF_01895 Ribonuclease R [rnr]. 28 744 57.869 T 23-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 RR42_RS13065 2ef8e347af279ed5b72934ec1eb24fa2 863 Gene3D G3DSA:2.40.50.140 663 745 9.3E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS13065 2ef8e347af279ed5b72934ec1eb24fa2 863 PANTHER PTHR23355:SF9 2 579 6.8E-243 T 23-04-2016 RR42_RS13065 2ef8e347af279ed5b72934ec1eb24fa2 863 PANTHER PTHR23355:SF9 614 746 6.8E-243 T 23-04-2016 RR42_RS13065 2ef8e347af279ed5b72934ec1eb24fa2 863 Pfam PF00575 S1 RNA binding domain 660 741 6.6E-12 T 23-04-2016 IPR003029 S1 domain GO:0003676 RR42_RS13065 2ef8e347af279ed5b72934ec1eb24fa2 863 SMART SM00316 661 744 7.0E-15 T 23-04-2016 IPR022967 RNA-binding domain, S1 RR42_RS13065 2ef8e347af279ed5b72934ec1eb24fa2 863 SMART SM00316 70 131 17.0 T 23-04-2016 IPR022967 RNA-binding domain, S1 RR42_RS13915 086224a9138010549e4349db40e96b54 766 PANTHER PTHR23077 311 672 7.8E-20 T 23-04-2016 RR42_RS13915 086224a9138010549e4349db40e96b54 766 SUPERFAMILY SSF52540 307 475 3.37E-25 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13915 086224a9138010549e4349db40e96b54 766 SUPERFAMILY SSF52540 547 718 2.06E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13915 086224a9138010549e4349db40e96b54 766 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 311 443 2.0E-14 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RR42_RS13915 086224a9138010549e4349db40e96b54 766 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 559 680 4.9E-29 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RR42_RS13915 086224a9138010549e4349db40e96b54 766 Gene3D G3DSA:3.40.50.300 297 474 5.5E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13915 086224a9138010549e4349db40e96b54 766 Gene3D G3DSA:3.40.50.300 552 707 3.0E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13915 086224a9138010549e4349db40e96b54 766 SMART SM00382 555 684 1.5E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS13915 086224a9138010549e4349db40e96b54 766 SMART SM00382 307 447 3.9E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS13915 086224a9138010549e4349db40e96b54 766 PANTHER PTHR23077:SF55 311 672 7.8E-20 T 23-04-2016 RR42_RS18350 104339ac8d98b28264c3c92e32d43b7c 329 Pfam PF00107 Zinc-binding dehydrogenase 161 273 3.1E-15 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RR42_RS18350 104339ac8d98b28264c3c92e32d43b7c 329 Gene3D G3DSA:3.40.50.720 128 295 5.2E-78 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS18350 104339ac8d98b28264c3c92e32d43b7c 329 SMART SM00829 13 325 1.1E-6 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RR42_RS18350 104339ac8d98b28264c3c92e32d43b7c 329 PANTHER PTHR11695 17 328 5.8E-144 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RR42_RS18350 104339ac8d98b28264c3c92e32d43b7c 329 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 4 327 2.4E-131 T 23-04-2016 IPR014188 Acrylyl-CoA reductase AcuI RR42_RS18350 104339ac8d98b28264c3c92e32d43b7c 329 PANTHER PTHR11695:SF13 17 328 5.8E-144 T 23-04-2016 IPR014188 Acrylyl-CoA reductase AcuI RR42_RS18350 104339ac8d98b28264c3c92e32d43b7c 329 SUPERFAMILY SSF50129 3 147 2.83E-39 T 23-04-2016 IPR011032 GroES-like RR42_RS18350 104339ac8d98b28264c3c92e32d43b7c 329 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 92 1.9E-5 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RR42_RS18350 104339ac8d98b28264c3c92e32d43b7c 329 Gene3D G3DSA:3.90.180.10 21 89 1.9E-5 T 23-04-2016 IPR011032 GroES-like RR42_RS18350 104339ac8d98b28264c3c92e32d43b7c 329 SUPERFAMILY SSF51735 121 290 1.76E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS03820 8d1205c46922db7556bcdedafb389409 80 SUPERFAMILY SSF54928 2 71 2.28E-7 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 RR42_RS03820 8d1205c46922db7556bcdedafb389409 80 Gene3D G3DSA:3.30.70.330 3 72 3.4E-8 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 RR42_RS03820 8d1205c46922db7556bcdedafb389409 80 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 47 3.0E-6 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 RR42_RS17345 7f7063cfd10f42a62bce65be41f19df6 379 SUPERFAMILY SSF52540 5 345 2.17E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17345 7f7063cfd10f42a62bce65be41f19df6 379 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 201 215 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RR42_RS17345 7f7063cfd10f42a62bce65be41f19df6 379 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 11 351 4.9E-137 T 23-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 RR42_RS17345 7f7063cfd10f42a62bce65be41f19df6 379 Gene3D G3DSA:3.40.50.300 110 352 1.8E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17345 7f7063cfd10f42a62bce65be41f19df6 379 PANTHER PTHR30486:SF3 11 368 3.8E-155 T 23-04-2016 RR42_RS17345 7f7063cfd10f42a62bce65be41f19df6 379 PANTHER PTHR30486 11 368 3.8E-155 T 23-04-2016 RR42_RS17345 7f7063cfd10f42a62bce65be41f19df6 379 Pfam PF00437 Type II/IV secretion system protein 122 258 4.7E-39 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RR42_RS11010 c04b9a472cae832515735a66cb7e84aa 173 SUPERFAMILY SSF52949 4 172 4.21E-61 T 23-04-2016 RR42_RS11010 c04b9a472cae832515735a66cb7e84aa 173 Pfam PF01661 Macro domain 22 138 8.8E-42 T 23-04-2016 IPR002589 Macro domain RR42_RS11010 c04b9a472cae832515735a66cb7e84aa 173 PANTHER PTHR11106 11 173 2.5E-75 T 23-04-2016 RR42_RS11010 c04b9a472cae832515735a66cb7e84aa 173 SMART SM00506 5 138 4.5E-53 T 23-04-2016 IPR002589 Macro domain RR42_RS11010 c04b9a472cae832515735a66cb7e84aa 173 Gene3D G3DSA:3.40.220.10 5 171 1.0E-65 T 23-04-2016 RR42_RS16580 20d6b44fd94483444b16eeab73716de3 324 Gene3D G3DSA:1.10.10.10 13 93 2.4E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS16580 20d6b44fd94483444b16eeab73716de3 324 Gene3D G3DSA:3.40.190.10 94 212 8.6E-19 T 23-04-2016 RR42_RS16580 20d6b44fd94483444b16eeab73716de3 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 51 4.0E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS16580 20d6b44fd94483444b16eeab73716de3 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 62 4.0E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS16580 20d6b44fd94483444b16eeab73716de3 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 4.0E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS16580 20d6b44fd94483444b16eeab73716de3 324 SUPERFAMILY SSF46785 8 118 2.72E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS16580 20d6b44fd94483444b16eeab73716de3 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 73 3.9E-20 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS16580 20d6b44fd94483444b16eeab73716de3 324 SUPERFAMILY SSF53850 100 310 2.5E-28 T 23-04-2016 RR42_RS16580 20d6b44fd94483444b16eeab73716de3 324 PANTHER PTHR30293 11 321 1.6E-50 T 23-04-2016 RR42_RS16580 20d6b44fd94483444b16eeab73716de3 324 Pfam PF03466 LysR substrate binding domain 99 308 6.6E-28 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS16580 20d6b44fd94483444b16eeab73716de3 324 Gene3D G3DSA:3.40.190.10 213 281 6.1E-9 T 23-04-2016 RR42_RS20100 915fe2bb76a5a7748a188c19d983050b 371 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 14 291 9.1E-57 T 23-04-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RR42_RS20100 915fe2bb76a5a7748a188c19d983050b 371 PANTHER PTHR36510 1 371 2.6E-126 T 23-04-2016 RR42_RS20100 915fe2bb76a5a7748a188c19d983050b 371 SUPERFAMILY SSF55931 4 369 7.85E-115 T 23-04-2016 RR42_RS20100 915fe2bb76a5a7748a188c19d983050b 371 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 13 297 1.4E-105 T 23-04-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RR42_RS20100 915fe2bb76a5a7748a188c19d983050b 371 PANTHER PTHR36510:SF1 1 371 2.6E-126 T 23-04-2016 RR42_RS20100 915fe2bb76a5a7748a188c19d983050b 371 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 371 100.547 T 23-04-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RR42_RS17250 7c458de7943a1c43ebd3f4c3c05a5179 273 Gene3D G3DSA:3.20.20.60 10 271 3.0E-111 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS17250 7c458de7943a1c43ebd3f4c3c05a5179 273 PIRSF PIRSF000388 5 273 1.1E-98 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 RR42_RS17250 7c458de7943a1c43ebd3f4c3c05a5179 273 SUPERFAMILY SSF51621 12 271 1.1E-102 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS17250 7c458de7943a1c43ebd3f4c3c05a5179 273 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 12 271 1.9E-96 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 RR42_RS17250 7c458de7943a1c43ebd3f4c3c05a5179 273 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 12 271 41.388 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 RR42_RS17250 7c458de7943a1c43ebd3f4c3c05a5179 273 Pfam PF02548 Ketopantoate hydroxymethyltransferase 12 266 2.2E-107 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 RR42_RS17250 7c458de7943a1c43ebd3f4c3c05a5179 273 PANTHER PTHR20881 7 271 3.5E-138 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 RR42_RS02885 28f4e4a9f7c599e81b451df247914c1c 520 PANTHER PTHR11014 332 516 3.0E-66 T 23-04-2016 RR42_RS02885 28f4e4a9f7c599e81b451df247914c1c 520 PANTHER PTHR11014 159 316 3.0E-66 T 23-04-2016 RR42_RS02885 28f4e4a9f7c599e81b451df247914c1c 520 PANTHER PTHR11014:SF72 159 316 3.0E-66 T 23-04-2016 RR42_RS02885 28f4e4a9f7c599e81b451df247914c1c 520 Pfam PF01546 Peptidase family M20/M25/M40 142 516 1.2E-18 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RR42_RS02885 28f4e4a9f7c599e81b451df247914c1c 520 PANTHER PTHR11014:SF72 31 135 3.0E-66 T 23-04-2016 RR42_RS02885 28f4e4a9f7c599e81b451df247914c1c 520 SUPERFAMILY SSF53187 32 248 2.54E-40 T 23-04-2016 RR42_RS02885 28f4e4a9f7c599e81b451df247914c1c 520 SUPERFAMILY SSF53187 433 516 2.54E-40 T 23-04-2016 RR42_RS02885 28f4e4a9f7c599e81b451df247914c1c 520 Pfam PF07687 Peptidase dimerisation domain 246 399 1.1E-16 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS02885 28f4e4a9f7c599e81b451df247914c1c 520 PANTHER PTHR11014:SF72 332 516 3.0E-66 T 23-04-2016 RR42_RS02885 28f4e4a9f7c599e81b451df247914c1c 520 Gene3D G3DSA:3.30.70.360 248 407 3.5E-41 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS02885 28f4e4a9f7c599e81b451df247914c1c 520 PANTHER PTHR11014 31 135 3.0E-66 T 23-04-2016 RR42_RS02885 28f4e4a9f7c599e81b451df247914c1c 520 Gene3D G3DSA:3.40.630.10 432 516 1.2E-46 T 23-04-2016 RR42_RS02885 28f4e4a9f7c599e81b451df247914c1c 520 Gene3D G3DSA:3.40.630.10 32 242 1.2E-46 T 23-04-2016 RR42_RS05120 7c2256b332ba65386d80b78d0e53de85 326 PIRSF PIRSF017082 4 325 6.0E-81 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS05120 7c2256b332ba65386d80b78d0e53de85 326 PANTHER PTHR30349:SF16 8 307 3.2E-72 T 23-04-2016 RR42_RS05120 7c2256b332ba65386d80b78d0e53de85 326 PANTHER PTHR30349 8 307 3.2E-72 T 23-04-2016 RR42_RS05120 7c2256b332ba65386d80b78d0e53de85 326 SUPERFAMILY SSF53850 101 288 1.88E-12 T 23-04-2016 RR42_RS05120 7c2256b332ba65386d80b78d0e53de85 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 322 5.1E-74 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS14800 cbc3256a187cffa458d1fdcbe36e1bbd 307 Gene3D G3DSA:3.40.190.10 186 255 2.8E-7 T 23-04-2016 RR42_RS14800 cbc3256a187cffa458d1fdcbe36e1bbd 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.0E-15 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS14800 cbc3256a187cffa458d1fdcbe36e1bbd 307 SUPERFAMILY SSF53850 90 291 3.62E-24 T 23-04-2016 RR42_RS14800 cbc3256a187cffa458d1fdcbe36e1bbd 307 Pfam PF03466 LysR substrate binding domain 90 287 8.5E-20 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS14800 cbc3256a187cffa458d1fdcbe36e1bbd 307 Gene3D G3DSA:3.40.190.10 90 185 3.4E-14 T 23-04-2016 RR42_RS14800 cbc3256a187cffa458d1fdcbe36e1bbd 307 SUPERFAMILY SSF46785 2 112 1.72E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS14800 cbc3256a187cffa458d1fdcbe36e1bbd 307 Gene3D G3DSA:1.10.10.10 4 88 6.1E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS14800 cbc3256a187cffa458d1fdcbe36e1bbd 307 PANTHER PTHR30126:SF4 3 306 1.1E-109 T 23-04-2016 RR42_RS14800 cbc3256a187cffa458d1fdcbe36e1bbd 307 PANTHER PTHR30126 3 306 1.1E-109 T 23-04-2016 RR42_RS18205 09d5f6b0ab9dfc74b75578d0a0b9f87b 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 319 2.0E-40 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS18205 09d5f6b0ab9dfc74b75578d0a0b9f87b 325 PANTHER PTHR30465:SF0 1 320 3.3E-108 T 23-04-2016 RR42_RS18205 09d5f6b0ab9dfc74b75578d0a0b9f87b 325 Gene3D G3DSA:1.10.3720.10 90 316 6.2E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS18205 09d5f6b0ab9dfc74b75578d0a0b9f87b 325 PANTHER PTHR30465 1 320 3.3E-108 T 23-04-2016 RR42_RS18205 09d5f6b0ab9dfc74b75578d0a0b9f87b 325 SUPERFAMILY SSF161098 90 305 1.96E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS04565 6252fa6ad1a7b4075e9b1fe226906a71 265 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 26 265 2.8E-81 T 23-04-2016 IPR004872 Lipoprotein NlpA family RR42_RS04565 6252fa6ad1a7b4075e9b1fe226906a71 265 Pfam PF03180 NLPA lipoprotein 30 265 3.6E-93 T 23-04-2016 IPR004872 Lipoprotein NlpA family RR42_RS04565 6252fa6ad1a7b4075e9b1fe226906a71 265 PANTHER PTHR30429 1 265 8.1E-131 T 23-04-2016 IPR004872 Lipoprotein NlpA family RR42_RS04565 6252fa6ad1a7b4075e9b1fe226906a71 265 Gene3D G3DSA:3.40.190.10 27 157 9.9E-57 T 23-04-2016 RR42_RS04565 6252fa6ad1a7b4075e9b1fe226906a71 265 PIRSF PIRSF002854 2 265 4.8E-104 T 23-04-2016 IPR004872 Lipoprotein NlpA family RR42_RS04565 6252fa6ad1a7b4075e9b1fe226906a71 265 SUPERFAMILY SSF53850 29 265 7.82E-92 T 23-04-2016 RR42_RS04065 d7c10d0a5955776d5170e7e0d486f913 287 PANTHER PTHR30537 1 281 7.0E-53 T 23-04-2016 RR42_RS04065 d7c10d0a5955776d5170e7e0d486f913 287 PANTHER PTHR30537:SF3 1 281 7.0E-53 T 23-04-2016 RR42_RS04065 d7c10d0a5955776d5170e7e0d486f913 287 Pfam PF03466 LysR substrate binding domain 87 281 1.2E-29 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS04065 d7c10d0a5955776d5170e7e0d486f913 287 Gene3D G3DSA:1.10.10.10 1 84 3.7E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS04065 d7c10d0a5955776d5170e7e0d486f913 287 SUPERFAMILY SSF53850 88 283 9.95E-33 T 23-04-2016 RR42_RS04065 d7c10d0a5955776d5170e7e0d486f913 287 SUPERFAMILY SSF46785 1 111 2.39E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS04065 d7c10d0a5955776d5170e7e0d486f913 287 Gene3D G3DSA:3.40.190.10 92 174 2.6E-15 T 23-04-2016 RR42_RS04065 d7c10d0a5955776d5170e7e0d486f913 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.6E-16 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS01040 cebc3bb4491e4ca48eab56eff2d24fef 362 SUPERFAMILY SSF52540 5 206 5.72E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01040 cebc3bb4491e4ca48eab56eff2d24fef 362 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 186 7.5E-56 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RR42_RS01040 cebc3bb4491e4ca48eab56eff2d24fef 362 SMART SM00833 268 361 8.8E-14 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RR42_RS01040 cebc3bb4491e4ca48eab56eff2d24fef 362 SUPERFAMILY SSF90002 268 361 4.05E-24 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RR42_RS01040 cebc3bb4491e4ca48eab56eff2d24fef 362 PANTHER PTHR13748:SF43 244 362 3.3E-126 T 23-04-2016 RR42_RS01040 cebc3bb4491e4ca48eab56eff2d24fef 362 PANTHER PTHR13748:SF43 5 213 3.3E-126 T 23-04-2016 RR42_RS01040 cebc3bb4491e4ca48eab56eff2d24fef 362 Gene3D G3DSA:3.40.50.300 4 205 4.4E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01040 cebc3bb4491e4ca48eab56eff2d24fef 362 Gene3D G3DSA:3.30.1220.10 247 362 1.5E-40 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RR42_RS01040 cebc3bb4491e4ca48eab56eff2d24fef 362 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 268 361 1.5E-19 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RR42_RS01040 cebc3bb4491e4ca48eab56eff2d24fef 362 PANTHER PTHR13748 244 362 3.3E-126 T 23-04-2016 RR42_RS01040 cebc3bb4491e4ca48eab56eff2d24fef 362 PANTHER PTHR13748 5 213 3.3E-126 T 23-04-2016 RR42_RS00910 e62d6f43c90cf612bfe61fd1087cf1ff 141 Gene3D G3DSA:3.10.450.50 13 136 1.3E-40 T 23-04-2016 IPR032710 NTF2-like domain RR42_RS00910 e62d6f43c90cf612bfe61fd1087cf1ff 141 SUPERFAMILY SSF54427 32 136 7.89E-35 T 23-04-2016 IPR032710 NTF2-like domain RR42_RS00910 e62d6f43c90cf612bfe61fd1087cf1ff 141 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 9 135 27.055 T 23-04-2016 IPR023006 Uncharacterised protein family UPF0225 RR42_RS10515 7afc52351442534726841db81079930c 226 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 28 226 7.2E-52 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RR42_RS10515 7afc52351442534726841db81079930c 226 SUPERFAMILY SSF56529 21 225 1.96E-65 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RR42_RS10515 7afc52351442534726841db81079930c 226 PANTHER PTHR11820 25 225 5.0E-78 T 23-04-2016 RR42_RS10515 7afc52351442534726841db81079930c 226 PANTHER PTHR11820:SF7 25 225 5.0E-78 T 23-04-2016 RR42_RS10515 7afc52351442534726841db81079930c 226 Gene3D G3DSA:3.90.850.10 21 225 3.2E-74 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RR42_RS15595 e5ee1e086dd0cf8728c79ae456ab0044 678 Gene3D G3DSA:3.30.300.30 538 637 2.4E-13 T 23-04-2016 RR42_RS15595 e5ee1e086dd0cf8728c79ae456ab0044 678 Gene3D G3DSA:3.40.50.980 288 422 2.7E-12 T 23-04-2016 RR42_RS15595 e5ee1e086dd0cf8728c79ae456ab0044 678 SUPERFAMILY SSF56801 24 661 7.98E-116 T 23-04-2016 RR42_RS15595 e5ee1e086dd0cf8728c79ae456ab0044 678 ProSitePatterns PS00455 Putative AMP-binding domain signature. 282 293 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS15595 e5ee1e086dd0cf8728c79ae456ab0044 678 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 6 663 5.3E-236 T 23-04-2016 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16 RR42_RS15595 e5ee1e086dd0cf8728c79ae456ab0044 678 Gene3D G3DSA:3.40.50.980 106 287 6.8E-24 T 23-04-2016 RR42_RS15595 e5ee1e086dd0cf8728c79ae456ab0044 678 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 41 95 1.3E-11 T 23-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 RR42_RS15595 e5ee1e086dd0cf8728c79ae456ab0044 678 Pfam PF00501 AMP-binding enzyme 108 539 1.4E-42 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS15595 e5ee1e086dd0cf8728c79ae456ab0044 678 PANTHER PTHR24095 8 670 1.1E-269 T 23-04-2016 RR42_RS15595 e5ee1e086dd0cf8728c79ae456ab0044 678 PANTHER PTHR24095:SF46 8 670 1.1E-269 T 23-04-2016 RR42_RS16855 52b6124df04985ef3495107911ff271a 344 PANTHER PTHR14226:SF37 126 271 3.8E-53 T 23-04-2016 RR42_RS16855 52b6124df04985ef3495107911ff271a 344 PANTHER PTHR14226:SF37 5 98 3.8E-53 T 23-04-2016 RR42_RS16855 52b6124df04985ef3495107911ff271a 344 Pfam PF01734 Patatin-like phospholipase 15 213 2.9E-22 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RR42_RS16855 52b6124df04985ef3495107911ff271a 344 SUPERFAMILY SSF52151 120 328 2.3E-52 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RR42_RS16855 52b6124df04985ef3495107911ff271a 344 SUPERFAMILY SSF52151 11 88 2.3E-52 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RR42_RS16855 52b6124df04985ef3495107911ff271a 344 PANTHER PTHR14226 126 271 3.8E-53 T 23-04-2016 RR42_RS16855 52b6124df04985ef3495107911ff271a 344 PANTHER PTHR14226 5 98 3.8E-53 T 23-04-2016 RR42_RS16855 52b6124df04985ef3495107911ff271a 344 Gene3D G3DSA:3.40.1090.10 14 214 2.2E-10 T 23-04-2016 RR42_RS02310 60ef2076f41ec23f273a2ef0d80c9197 277 PANTHER PTHR34354 1 277 5.4E-87 T 23-04-2016 RR42_RS02310 60ef2076f41ec23f273a2ef0d80c9197 277 TIGRFAM TIGR03138 QueF: queuine synthase 5 277 3.1E-123 T 23-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RR42_RS02310 60ef2076f41ec23f273a2ef0d80c9197 277 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 15 126 1.3E-47 T 23-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RR42_RS02310 60ef2076f41ec23f273a2ef0d80c9197 277 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 277 157.128 T 23-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RR42_RS02310 60ef2076f41ec23f273a2ef0d80c9197 277 Pfam PF14489 QueF-like protein 190 263 8.0E-28 T 23-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RR42_RS02310 60ef2076f41ec23f273a2ef0d80c9197 277 Gene3D G3DSA:3.30.1130.10 15 132 3.5E-42 T 23-04-2016 RR42_RS02310 60ef2076f41ec23f273a2ef0d80c9197 277 PANTHER PTHR34354:SF1 1 277 5.4E-87 T 23-04-2016 RR42_RS02310 60ef2076f41ec23f273a2ef0d80c9197 277 PIRSF PIRSF004750 1 277 2.6E-126 T 23-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RR42_RS02310 60ef2076f41ec23f273a2ef0d80c9197 277 Gene3D G3DSA:3.30.1130.10 141 276 2.0E-54 T 23-04-2016 RR42_RS02310 60ef2076f41ec23f273a2ef0d80c9197 277 SUPERFAMILY SSF55620 181 262 1.04E-8 T 23-04-2016 RR42_RS00935 f9f413fd61c270c9835f67fd92e029e4 240 SUPERFAMILY SSF52540 1 221 1.46E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS00935 f9f413fd61c270c9835f67fd92e029e4 240 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 218 27.841 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 RR42_RS00935 f9f413fd61c270c9835f67fd92e029e4 240 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 181 1.1E-42 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 RR42_RS00935 f9f413fd61c270c9835f67fd92e029e4 240 Pfam PF13500 AAA domain 5 212 6.9E-35 T 23-04-2016 RR42_RS00935 f9f413fd61c270c9835f67fd92e029e4 240 PIRSF PIRSF006755 1 230 1.6E-64 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 RR42_RS00935 f9f413fd61c270c9835f67fd92e029e4 240 PANTHER PTHR21343:SF13 1 228 2.5E-73 T 23-04-2016 RR42_RS00935 f9f413fd61c270c9835f67fd92e029e4 240 Gene3D G3DSA:3.40.50.300 3 217 5.9E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS00935 f9f413fd61c270c9835f67fd92e029e4 240 PANTHER PTHR21343 1 228 2.5E-73 T 23-04-2016 RR42_RS02515 666f347426e16ad4fd25d92dca044caa 399 Gene3D G3DSA:3.40.47.10 283 398 9.7E-64 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS02515 666f347426e16ad4fd25d92dca044caa 399 Gene3D G3DSA:3.40.47.10 151 190 9.7E-64 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS02515 666f347426e16ad4fd25d92dca044caa 399 ProSitePatterns PS00099 Thiolases active site. 380 393 - T 23-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RR42_RS02515 666f347426e16ad4fd25d92dca044caa 399 Pfam PF00108 Thiolase, N-terminal domain 9 268 2.8E-73 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RR42_RS02515 666f347426e16ad4fd25d92dca044caa 399 SUPERFAMILY SSF53901 278 398 2.24E-41 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS02515 666f347426e16ad4fd25d92dca044caa 399 SUPERFAMILY SSF53901 3 273 9.91E-73 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS02515 666f347426e16ad4fd25d92dca044caa 399 PIRSF PIRSF000429 2 399 5.4E-126 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RR42_RS02515 666f347426e16ad4fd25d92dca044caa 399 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 23-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 RR42_RS02515 666f347426e16ad4fd25d92dca044caa 399 Gene3D G3DSA:3.40.47.10 7 130 1.1E-65 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS02515 666f347426e16ad4fd25d92dca044caa 399 Gene3D G3DSA:3.40.47.10 191 282 1.1E-65 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS02515 666f347426e16ad4fd25d92dca044caa 399 PANTHER PTHR18919 5 399 8.5E-168 T 23-04-2016 RR42_RS02515 666f347426e16ad4fd25d92dca044caa 399 ProSitePatterns PS00737 Thiolases signature 2. 345 361 - T 23-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RR42_RS02515 666f347426e16ad4fd25d92dca044caa 399 Pfam PF02803 Thiolase, C-terminal domain 278 398 5.3E-43 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RR42_RS02515 666f347426e16ad4fd25d92dca044caa 399 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 397 1.6E-141 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RR42_RS01560 ce2985b8b4661856181637db0f2bb0fd 593 SUPERFAMILY SSF141868 340 584 7.19E-78 T 23-04-2016 IPR001633 EAL domain RR42_RS01560 ce2985b8b4661856181637db0f2bb0fd 593 Gene3D G3DSA:3.30.70.270 146 327 4.7E-53 T 23-04-2016 RR42_RS01560 ce2985b8b4661856181637db0f2bb0fd 593 Gene3D G3DSA:3.30.450.20 29 131 1.9E-19 T 23-04-2016 RR42_RS01560 ce2985b8b4661856181637db0f2bb0fd 593 SUPERFAMILY SSF55073 149 323 2.2E-41 T 23-04-2016 IPR029787 Nucleotide cyclase RR42_RS01560 ce2985b8b4661856181637db0f2bb0fd 593 Pfam PF00990 Diguanylate cyclase, GGDEF domain 189 317 8.0E-35 T 23-04-2016 IPR000160 GGDEF domain RR42_RS01560 ce2985b8b4661856181637db0f2bb0fd 593 SUPERFAMILY SSF55785 29 122 2.44E-13 T 23-04-2016 IPR000014 PAS domain RR42_RS01560 ce2985b8b4661856181637db0f2bb0fd 593 SMART SM00267 133 323 2.1E-49 T 23-04-2016 IPR000160 GGDEF domain RR42_RS01560 ce2985b8b4661856181637db0f2bb0fd 593 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 140 322 6.6E-31 T 23-04-2016 IPR000160 GGDEF domain RR42_RS01560 ce2985b8b4661856181637db0f2bb0fd 593 Pfam PF08448 PAS fold 34 134 1.3E-7 T 23-04-2016 IPR013656 PAS fold-4 RR42_RS01560 ce2985b8b4661856181637db0f2bb0fd 593 Gene3D G3DSA:3.20.20.450 336 584 2.6E-86 T 23-04-2016 IPR001633 EAL domain RR42_RS01560 ce2985b8b4661856181637db0f2bb0fd 593 PANTHER PTHR33121:SF13 274 584 2.9E-68 T 23-04-2016 RR42_RS01560 ce2985b8b4661856181637db0f2bb0fd 593 SMART SM00091 28 94 6.6E-8 T 23-04-2016 IPR000014 PAS domain RR42_RS01560 ce2985b8b4661856181637db0f2bb0fd 593 PANTHER PTHR33121 274 584 2.9E-68 T 23-04-2016 RR42_RS01560 ce2985b8b4661856181637db0f2bb0fd 593 Pfam PF00563 EAL domain 339 574 9.5E-64 T 23-04-2016 IPR001633 EAL domain RR42_RS01560 ce2985b8b4661856181637db0f2bb0fd 593 SMART SM00052 333 579 3.6E-95 T 23-04-2016 IPR001633 EAL domain RR42_RS01250 7b3a0cac23587c8b009404ec6fd776f6 288 Pfam PF01678 Diaminopimelate epimerase 5 124 4.4E-35 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS01250 7b3a0cac23587c8b009404ec6fd776f6 288 Pfam PF01678 Diaminopimelate epimerase 161 275 3.7E-30 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS01250 7b3a0cac23587c8b009404ec6fd776f6 288 Gene3D G3DSA:3.10.310.10 1 120 1.7E-56 T 23-04-2016 RR42_RS01250 7b3a0cac23587c8b009404ec6fd776f6 288 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 23-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS01250 7b3a0cac23587c8b009404ec6fd776f6 288 SUPERFAMILY SSF54506 3 283 8.19E-54 T 23-04-2016 RR42_RS01250 7b3a0cac23587c8b009404ec6fd776f6 288 Gene3D G3DSA:3.10.310.10 121 271 2.2E-50 T 23-04-2016 RR42_RS01250 7b3a0cac23587c8b009404ec6fd776f6 288 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 283 39.444 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS01250 7b3a0cac23587c8b009404ec6fd776f6 288 PANTHER PTHR31689 1 287 8.8E-126 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS01250 7b3a0cac23587c8b009404ec6fd776f6 288 PANTHER PTHR31689:SF0 1 287 8.8E-126 T 23-04-2016 RR42_RS01250 7b3a0cac23587c8b009404ec6fd776f6 288 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 281 8.2E-90 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS14850 8c35a3881e64256b4041778e8a4d5441 450 SUPERFAMILY SSF103473 23 445 4.05E-77 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS14850 8c35a3881e64256b4041778e8a4d5441 450 Pfam PF07690 Major Facilitator Superfamily 35 403 9.8E-46 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS14850 8c35a3881e64256b4041778e8a4d5441 450 Gene3D G3DSA:1.20.1250.20 258 441 9.2E-21 T 23-04-2016 RR42_RS14850 8c35a3881e64256b4041778e8a4d5441 450 Gene3D G3DSA:1.20.1250.20 29 227 7.6E-40 T 23-04-2016 RR42_RS14850 8c35a3881e64256b4041778e8a4d5441 450 PANTHER PTHR11662:SF267 23 440 1.6E-204 T 23-04-2016 RR42_RS14850 8c35a3881e64256b4041778e8a4d5441 450 PANTHER PTHR11662 23 440 1.6E-204 T 23-04-2016 RR42_RS19590 6bf5793a1fdf3d561b5295f2962cfba1 415 PANTHER PTHR11360 11 396 1.8E-51 T 23-04-2016 RR42_RS19590 6bf5793a1fdf3d561b5295f2962cfba1 415 PANTHER PTHR11360:SF126 11 396 1.8E-51 T 23-04-2016 RR42_RS19590 6bf5793a1fdf3d561b5295f2962cfba1 415 SUPERFAMILY SSF103473 15 401 1.7E-34 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS19590 6bf5793a1fdf3d561b5295f2962cfba1 415 Gene3D G3DSA:1.20.1250.20 30 187 1.6E-11 T 23-04-2016 RR42_RS19590 6bf5793a1fdf3d561b5295f2962cfba1 415 Gene3D G3DSA:1.20.1250.20 224 401 2.0E-5 T 23-04-2016 RR42_RS19590 6bf5793a1fdf3d561b5295f2962cfba1 415 Pfam PF07690 Major Facilitator Superfamily 34 364 6.3E-19 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS18815 3b71cde5b82cdd1f13556222283f18da 247 Gene3D G3DSA:1.20.5.100 215 247 3.5E-9 T 23-04-2016 RR42_RS18815 3b71cde5b82cdd1f13556222283f18da 247 SUPERFAMILY SSF46626 20 211 4.58E-53 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS18815 3b71cde5b82cdd1f13556222283f18da 247 PANTHER PTHR10266 194 247 5.4E-47 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RR42_RS18815 3b71cde5b82cdd1f13556222283f18da 247 PANTHER PTHR10266 7 164 5.4E-47 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RR42_RS18815 3b71cde5b82cdd1f13556222283f18da 247 PRINTS PR00603 Cytochrome C1 signature 212 227 4.0E-8 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RR42_RS18815 3b71cde5b82cdd1f13556222283f18da 247 PRINTS PR00603 Cytochrome C1 signature 193 212 4.0E-8 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RR42_RS18815 3b71cde5b82cdd1f13556222283f18da 247 PRINTS PR00603 Cytochrome C1 signature 46 65 4.0E-8 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RR42_RS18815 3b71cde5b82cdd1f13556222283f18da 247 Pfam PF02167 Cytochrome C1 family 33 245 7.5E-22 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RR42_RS18815 3b71cde5b82cdd1f13556222283f18da 247 PANTHER PTHR10266:SF3 194 247 5.4E-47 T 23-04-2016 RR42_RS18815 3b71cde5b82cdd1f13556222283f18da 247 PANTHER PTHR10266:SF3 7 164 5.4E-47 T 23-04-2016 RR42_RS18815 3b71cde5b82cdd1f13556222283f18da 247 Gene3D G3DSA:1.10.760.10 21 212 6.4E-68 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS19580 1262276a69d95cbf5265da02f86332e4 139 Pfam PF00583 Acetyltransferase (GNAT) family 50 123 2.4E-15 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RR42_RS19580 1262276a69d95cbf5265da02f86332e4 139 SUPERFAMILY SSF55729 1 127 1.25E-30 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS19580 1262276a69d95cbf5265da02f86332e4 139 PANTHER PTHR23091 1 127 4.7E-25 T 23-04-2016 RR42_RS19580 1262276a69d95cbf5265da02f86332e4 139 Gene3D G3DSA:3.40.630.30 1 123 1.1E-31 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS13475 c9b9398a359873b197774f922ad3e45f 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 239 254 1.6E-14 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS13475 c9b9398a359873b197774f922ad3e45f 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 179 198 1.6E-14 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS13475 c9b9398a359873b197774f922ad3e45f 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 100 114 1.6E-14 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS13475 c9b9398a359873b197774f922ad3e45f 448 Gene3D G3DSA:3.40.120.10 256 370 3.5E-33 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS13475 c9b9398a359873b197774f922ad3e45f 448 Gene3D G3DSA:3.40.120.10 181 255 3.5E-27 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS13475 c9b9398a359873b197774f922ad3e45f 448 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 445 45.825 T 23-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS13475 c9b9398a359873b197774f922ad3e45f 448 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 140 1.1E-41 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS13475 c9b9398a359873b197774f922ad3e45f 448 SUPERFAMILY SSF53738 161 261 3.92E-30 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS13475 c9b9398a359873b197774f922ad3e45f 448 PANTHER PTHR22573 3 448 5.2E-156 T 23-04-2016 RR42_RS13475 c9b9398a359873b197774f922ad3e45f 448 SUPERFAMILY SSF53738 263 369 8.63E-30 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS13475 c9b9398a359873b197774f922ad3e45f 448 Gene3D G3DSA:3.40.120.10 3 158 3.9E-47 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS13475 c9b9398a359873b197774f922ad3e45f 448 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 369 4.7E-33 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS13475 c9b9398a359873b197774f922ad3e45f 448 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 447 2.2E-178 T 23-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS13475 c9b9398a359873b197774f922ad3e45f 448 SUPERFAMILY SSF53738 2 186 7.46E-48 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS13475 c9b9398a359873b197774f922ad3e45f 448 PANTHER PTHR22573:SF15 3 448 5.2E-156 T 23-04-2016 RR42_RS13475 c9b9398a359873b197774f922ad3e45f 448 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 259 1.2E-20 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS13475 c9b9398a359873b197774f922ad3e45f 448 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 378 447 4.4E-13 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS13475 c9b9398a359873b197774f922ad3e45f 448 SUPERFAMILY SSF55957 362 447 9.94E-20 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS13475 c9b9398a359873b197774f922ad3e45f 448 Gene3D G3DSA:3.30.310.50 374 447 9.6E-18 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS13475 c9b9398a359873b197774f922ad3e45f 448 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 101 110 - T 23-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS13520 bf888943aaed4758909b519c98cad8cd 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 235 244 8.1E-10 T 23-04-2016 RR42_RS13520 bf888943aaed4758909b519c98cad8cd 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 348 361 8.1E-10 T 23-04-2016 RR42_RS13520 bf888943aaed4758909b519c98cad8cd 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 263 274 8.1E-10 T 23-04-2016 RR42_RS13520 bf888943aaed4758909b519c98cad8cd 378 Pfam PF00117 Glutamine amidotransferase class-I 196 371 7.7E-46 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RR42_RS13520 bf888943aaed4758909b519c98cad8cd 378 SUPERFAMILY SSF52021 7 152 2.48E-56 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS13520 bf888943aaed4758909b519c98cad8cd 378 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 8 374 1.7E-145 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS13520 bf888943aaed4758909b519c98cad8cd 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 263 279 5.9E-40 T 23-04-2016 RR42_RS13520 bf888943aaed4758909b519c98cad8cd 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 232 246 5.9E-40 T 23-04-2016 RR42_RS13520 bf888943aaed4758909b519c98cad8cd 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 280 297 5.9E-40 T 23-04-2016 RR42_RS13520 bf888943aaed4758909b519c98cad8cd 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 305 316 5.9E-40 T 23-04-2016 RR42_RS13520 bf888943aaed4758909b519c98cad8cd 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 193 207 5.9E-40 T 23-04-2016 RR42_RS13520 bf888943aaed4758909b519c98cad8cd 378 Gene3D G3DSA:3.40.50.880 156 375 1.0E-78 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RR42_RS13520 bf888943aaed4758909b519c98cad8cd 378 SMART SM01097 6 136 1.7E-87 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS13520 bf888943aaed4758909b519c98cad8cd 378 SUPERFAMILY SSF52317 156 376 3.11E-63 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RR42_RS13520 bf888943aaed4758909b519c98cad8cd 378 Gene3D G3DSA:3.50.30.20 8 145 1.4E-60 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS13520 bf888943aaed4758909b519c98cad8cd 378 PANTHER PTHR11405 6 378 1.5E-231 T 23-04-2016 RR42_RS13520 bf888943aaed4758909b519c98cad8cd 378 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 6 377 48.116 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS13520 bf888943aaed4758909b519c98cad8cd 378 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 8 135 1.7E-51 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS18860 0bd69cef20b07182483e3c901453a4ff 78 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 46 1.2E-22 T 23-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 RR42_RS18860 0bd69cef20b07182483e3c901453a4ff 78 Pfam PF02416 mttA/Hcf106 family 5 48 5.6E-14 T 23-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 RR42_RS18860 0bd69cef20b07182483e3c901453a4ff 78 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 77 22.731 T 23-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 RR42_RS18860 0bd69cef20b07182483e3c901453a4ff 78 PANTHER PTHR33162 1 46 4.1E-15 T 23-04-2016 RR42_RS18185 ece2af17accfe079b8b4927d4b5e606f 389 PANTHER PTHR30483:SF11 7 388 1.4E-65 T 23-04-2016 RR42_RS18185 ece2af17accfe079b8b4927d4b5e606f 389 SUPERFAMILY SSF53822 38 388 1.14E-78 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RR42_RS18185 ece2af17accfe079b8b4927d4b5e606f 389 Gene3D G3DSA:3.40.50.2300 162 319 1.5E-18 T 23-04-2016 RR42_RS18185 ece2af17accfe079b8b4927d4b5e606f 389 Gene3D G3DSA:3.40.50.2300 34 161 2.1E-43 T 23-04-2016 RR42_RS18185 ece2af17accfe079b8b4927d4b5e606f 389 Gene3D G3DSA:3.40.50.2300 320 372 2.1E-43 T 23-04-2016 RR42_RS18185 ece2af17accfe079b8b4927d4b5e606f 389 PANTHER PTHR30483 7 388 1.4E-65 T 23-04-2016 RR42_RS18185 ece2af17accfe079b8b4927d4b5e606f 389 Pfam PF13458 Periplasmic binding protein 38 373 9.2E-66 T 23-04-2016 IPR028081 Leucine-binding protein domain RR42_RS13010 b8bce3ea1fe4c5c5e720cf0dc30cc742 291 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 8 219 1.4E-26 T 23-04-2016 RR42_RS18120 22b3dcab9f3fe4ff9e44fde5d61f9b09 142 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 121 3.0E-63 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RR42_RS18120 22b3dcab9f3fe4ff9e44fde5d61f9b09 142 Pfam PF02381 MraZ protein, putative antitoxin-like 73 128 2.4E-14 T 23-04-2016 IPR020603 MraZ domain RR42_RS18120 22b3dcab9f3fe4ff9e44fde5d61f9b09 142 Pfam PF02381 MraZ protein, putative antitoxin-like 1 66 3.3E-13 T 23-04-2016 IPR020603 MraZ domain RR42_RS18120 22b3dcab9f3fe4ff9e44fde5d61f9b09 142 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 141 7.4E-35 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RR42_RS18120 22b3dcab9f3fe4ff9e44fde5d61f9b09 142 SUPERFAMILY SSF89447 2 130 6.28E-38 T 23-04-2016 RR42_RS18120 22b3dcab9f3fe4ff9e44fde5d61f9b09 142 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 142 50.228 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RR42_RS18120 22b3dcab9f3fe4ff9e44fde5d61f9b09 142 PANTHER PTHR34701 2 132 2.5E-40 T 23-04-2016 RR42_RS24135 486fb8ee99af6953497567c6c7a4b657 303 SMART SM00388 167 225 9.8E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS24135 486fb8ee99af6953497567c6c7a4b657 303 SUPERFAMILY SSF55874 201 303 1.36E-6 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS24135 486fb8ee99af6953497567c6c7a4b657 303 SMART SM00304 114 166 3.3E-6 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS24135 486fb8ee99af6953497567c6c7a4b657 303 Pfam PF00672 HAMP domain 97 162 2.6E-12 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS24135 486fb8ee99af6953497567c6c7a4b657 303 Gene3D G3DSA:1.10.287.130 157 211 1.2E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS24135 486fb8ee99af6953497567c6c7a4b657 303 Gene3D G3DSA:3.30.565.10 212 303 1.6E-6 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS24135 486fb8ee99af6953497567c6c7a4b657 303 Pfam PF00512 His Kinase A (phospho-acceptor) domain 168 223 5.8E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS24135 486fb8ee99af6953497567c6c7a4b657 303 PANTHER PTHR24423 108 303 8.7E-21 T 23-04-2016 RR42_RS24135 486fb8ee99af6953497567c6c7a4b657 303 PANTHER PTHR24423 3 15 8.7E-21 T 23-04-2016 RR42_RS24135 486fb8ee99af6953497567c6c7a4b657 303 SUPERFAMILY SSF47384 150 222 1.59E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS07480 6fda05f876c6128493142c3bd7c52b27 194 SUPERFAMILY SSF55811 2 162 2.84E-39 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RR42_RS07480 6fda05f876c6128493142c3bd7c52b27 194 Pfam PF14803 Nudix N-terminal 2 34 6.0E-17 T 23-04-2016 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.-+3.6.1.13|KEGG: 00332+3.6.1.-|KEGG: 00740+3.6.1.18|KEGG: 00790+3.6.1.- RR42_RS07480 6fda05f876c6128493142c3bd7c52b27 194 ProSitePatterns PS00893 Nudix box signature. 70 91 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RR42_RS07480 6fda05f876c6128493142c3bd7c52b27 194 PRINTS PR00502 NUDIX hydrolase family signature 65 79 6.9E-5 T 23-04-2016 IPR020476 NUDIX hydrolase RR42_RS07480 6fda05f876c6128493142c3bd7c52b27 194 PRINTS PR00502 NUDIX hydrolase family signature 79 94 6.9E-5 T 23-04-2016 IPR020476 NUDIX hydrolase RR42_RS07480 6fda05f876c6128493142c3bd7c52b27 194 Gene3D G3DSA:3.90.79.10 36 165 1.5E-33 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RR42_RS07480 6fda05f876c6128493142c3bd7c52b27 194 Pfam PF00293 NUDIX domain 38 141 7.1E-13 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RR42_RS07480 6fda05f876c6128493142c3bd7c52b27 194 PANTHER PTHR22769 1 167 3.4E-76 T 23-04-2016 RR42_RS07480 6fda05f876c6128493142c3bd7c52b27 194 Gene3D G3DSA:2.20.70.10 1 34 2.8E-19 T 23-04-2016 RR42_RS07480 6fda05f876c6128493142c3bd7c52b27 194 PANTHER PTHR22769:SF17 1 167 3.4E-76 T 23-04-2016 RR42_RS01530 aece7fcda4fb96fc5a29164b5ff9d33a 472 Gene3D G3DSA:3.30.499.10 295 305 3.8E-61 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS01530 aece7fcda4fb96fc5a29164b5ff9d33a 472 Gene3D G3DSA:3.30.499.10 337 468 3.8E-61 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS01530 aece7fcda4fb96fc5a29164b5ff9d33a 472 Pfam PF00330 Aconitase family (aconitate hydratase) 9 459 1.5E-136 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS01530 aece7fcda4fb96fc5a29164b5ff9d33a 472 ProSitePatterns PS00450 Aconitase family signature 1. 341 357 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS01530 aece7fcda4fb96fc5a29164b5ff9d33a 472 Gene3D G3DSA:3.40.1060.10 168 282 7.1E-30 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS01530 aece7fcda4fb96fc5a29164b5ff9d33a 472 ProSitePatterns PS01244 Aconitase family signature 2. 401 414 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS01530 aece7fcda4fb96fc5a29164b5ff9d33a 472 PRINTS PR00415 Aconitase family signature 135 150 1.9E-43 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS01530 aece7fcda4fb96fc5a29164b5ff9d33a 472 PRINTS PR00415 Aconitase family signature 121 134 1.9E-43 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS01530 aece7fcda4fb96fc5a29164b5ff9d33a 472 PRINTS PR00415 Aconitase family signature 401 414 1.9E-43 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS01530 aece7fcda4fb96fc5a29164b5ff9d33a 472 PRINTS PR00415 Aconitase family signature 211 224 1.9E-43 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS01530 aece7fcda4fb96fc5a29164b5ff9d33a 472 PRINTS PR00415 Aconitase family signature 288 302 1.9E-43 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS01530 aece7fcda4fb96fc5a29164b5ff9d33a 472 PRINTS PR00415 Aconitase family signature 197 210 1.9E-43 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS01530 aece7fcda4fb96fc5a29164b5ff9d33a 472 PRINTS PR00415 Aconitase family signature 110 118 1.9E-43 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS01530 aece7fcda4fb96fc5a29164b5ff9d33a 472 PRINTS PR00415 Aconitase family signature 84 97 1.9E-43 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS01530 aece7fcda4fb96fc5a29164b5ff9d33a 472 PRINTS PR00415 Aconitase family signature 345 356 1.9E-43 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS01530 aece7fcda4fb96fc5a29164b5ff9d33a 472 PANTHER PTHR11670 5 309 9.3E-205 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS01530 aece7fcda4fb96fc5a29164b5ff9d33a 472 PANTHER PTHR11670 329 468 9.3E-205 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS01530 aece7fcda4fb96fc5a29164b5ff9d33a 472 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 5 466 7.0E-185 T 23-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS01530 aece7fcda4fb96fc5a29164b5ff9d33a 472 Gene3D G3DSA:3.30.499.10 21 161 6.0E-21 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS01530 aece7fcda4fb96fc5a29164b5ff9d33a 472 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 468 51.194 T 23-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS01530 aece7fcda4fb96fc5a29164b5ff9d33a 472 PANTHER PTHR11670:SF38 5 309 9.3E-205 T 23-04-2016 RR42_RS01530 aece7fcda4fb96fc5a29164b5ff9d33a 472 PANTHER PTHR11670:SF38 329 468 9.3E-205 T 23-04-2016 RR42_RS01530 aece7fcda4fb96fc5a29164b5ff9d33a 472 SUPERFAMILY SSF53732 2 470 1.57E-151 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS06335 515a2bbf7201e40d50d943eab7f0aa1f 166 Gene3D G3DSA:2.40.100.10 3 165 6.5E-53 T 23-04-2016 IPR029000 Cyclophilin-like domain RR42_RS06335 515a2bbf7201e40d50d943eab7f0aa1f 166 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 38 55 - T 23-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 RR42_RS06335 515a2bbf7201e40d50d943eab7f0aa1f 166 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 4 162 4.4E-46 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RR42_RS06335 515a2bbf7201e40d50d943eab7f0aa1f 166 SUPERFAMILY SSF50891 4 164 7.74E-57 T 23-04-2016 IPR029000 Cyclophilin-like domain RR42_RS06335 515a2bbf7201e40d50d943eab7f0aa1f 166 PANTHER PTHR11071:SF192 5 166 3.4E-71 T 23-04-2016 RR42_RS06335 515a2bbf7201e40d50d943eab7f0aa1f 166 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 17 32 1.2E-12 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RR42_RS06335 515a2bbf7201e40d50d943eab7f0aa1f 166 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 55 1.2E-12 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RR42_RS06335 515a2bbf7201e40d50d943eab7f0aa1f 166 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 135 1.2E-12 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RR42_RS06335 515a2bbf7201e40d50d943eab7f0aa1f 166 PIRSF PIRSF001467 1 166 6.7E-27 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 RR42_RS06335 515a2bbf7201e40d50d943eab7f0aa1f 166 PANTHER PTHR11071 5 166 3.4E-71 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 RR42_RS15965 274fece3fa03b7968b82b833b4ebdcd6 403 Gene3D G3DSA:1.20.950.20 170 385 1.0E-63 T 23-04-2016 RR42_RS15965 274fece3fa03b7968b82b833b4ebdcd6 403 PANTHER PTHR30074 83 395 2.3E-79 T 23-04-2016 RR42_RS15965 274fece3fa03b7968b82b833b4ebdcd6 403 SUPERFAMILY SSF81342 170 382 8.63E-46 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RR42_RS15965 274fece3fa03b7968b82b833b4ebdcd6 403 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 174 376 1.5E-49 T 23-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 RR42_RS15965 274fece3fa03b7968b82b833b4ebdcd6 403 PANTHER PTHR30074:SF2 83 395 2.3E-79 T 23-04-2016 RR42_RS15965 274fece3fa03b7968b82b833b4ebdcd6 403 Pfam PF01292 Prokaryotic cytochrome b561 176 354 5.7E-19 T 23-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RR42_RS16655 10977bfbe604e862b1962261b5d1db59 228 Gene3D G3DSA:2.130.10.10 19 206 1.6E-16 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RR42_RS16655 10977bfbe604e862b1962261b5d1db59 228 Pfam PF13360 PQQ-like domain 39 205 1.8E-6 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat RR42_RS16655 10977bfbe604e862b1962261b5d1db59 228 SUPERFAMILY SSF50969 18 209 4.24E-24 T 23-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like RR42_RS37470 07ca869213c8de2b49f0053d4153fedd 256 SUPERFAMILY SSF48576 2 255 3.84E-84 T 23-04-2016 IPR008949 Isoprenoid synthase domain RR42_RS37470 07ca869213c8de2b49f0053d4153fedd 256 PANTHER PTHR12001 1 256 9.4E-97 T 23-04-2016 IPR017446 Polyprenyl synthetase-related RR42_RS37470 07ca869213c8de2b49f0053d4153fedd 256 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 32 46 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RR42_RS37470 07ca869213c8de2b49f0053d4153fedd 256 Gene3D G3DSA:1.10.600.10 2 255 1.0E-86 T 23-04-2016 IPR008949 Isoprenoid synthase domain RR42_RS37470 07ca869213c8de2b49f0053d4153fedd 256 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 154 166 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RR42_RS37470 07ca869213c8de2b49f0053d4153fedd 256 PANTHER PTHR12001:SF47 1 256 9.4E-97 T 23-04-2016 RR42_RS37470 07ca869213c8de2b49f0053d4153fedd 256 Pfam PF00348 Polyprenyl synthetase 2 212 4.6E-69 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RR42_RS00295 708b563c50fae563fefe22c89a0d8ad3 473 SMART SM00487 35 232 1.4E-58 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RR42_RS00295 708b563c50fae563fefe22c89a0d8ad3 473 Gene3D G3DSA:3.40.50.300 9 221 5.0E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS00295 708b563c50fae563fefe22c89a0d8ad3 473 Pfam PF00270 DEAD/DEAH box helicase 40 206 2.4E-46 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RR42_RS00295 708b563c50fae563fefe22c89a0d8ad3 473 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 164 172 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RR42_RS00295 708b563c50fae563fefe22c89a0d8ad3 473 Pfam PF03880 DbpA RNA binding domain 399 469 1.3E-22 T 23-04-2016 IPR005580 DbpA, RNA-binding domain RR42_RS00295 708b563c50fae563fefe22c89a0d8ad3 473 SMART SM00490 268 349 8.4E-27 T 23-04-2016 IPR001650 Helicase, C-terminal RR42_RS00295 708b563c50fae563fefe22c89a0d8ad3 473 Pfam PF00271 Helicase conserved C-terminal domain 254 348 4.5E-26 T 23-04-2016 IPR001650 Helicase, C-terminal RR42_RS00295 708b563c50fae563fefe22c89a0d8ad3 473 PANTHER PTHR24031:SF180 17 454 4.4E-241 T 23-04-2016 RR42_RS00295 708b563c50fae563fefe22c89a0d8ad3 473 PANTHER PTHR24031 17 454 4.4E-241 T 23-04-2016 RR42_RS00295 708b563c50fae563fefe22c89a0d8ad3 473 SUPERFAMILY SSF52540 85 365 6.38E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS00295 708b563c50fae563fefe22c89a0d8ad3 473 Gene3D G3DSA:3.40.50.300 222 381 7.4E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 Pfam PF00012 Hsp70 protein 21 601 5.8E-181 T 23-04-2016 IPR013126 Heat shock protein 70 family RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 PRINTS PR00301 70kDa heat shock protein signature 362 382 5.6E-54 T 23-04-2016 IPR013126 Heat shock protein 70 family RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 PRINTS PR00301 70kDa heat shock protein signature 150 170 5.6E-54 T 23-04-2016 IPR013126 Heat shock protein 70 family RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 PRINTS PR00301 70kDa heat shock protein signature 331 347 5.6E-54 T 23-04-2016 IPR013126 Heat shock protein 70 family RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 PRINTS PR00301 70kDa heat shock protein signature 469 485 5.6E-54 T 23-04-2016 IPR013126 Heat shock protein 70 family RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 PRINTS PR00301 70kDa heat shock protein signature 209 219 5.6E-54 T 23-04-2016 IPR013126 Heat shock protein 70 family RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 PRINTS PR00301 70kDa heat shock protein signature 388 407 5.6E-54 T 23-04-2016 IPR013126 Heat shock protein 70 family RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 PRINTS PR00301 70kDa heat shock protein signature 48 60 5.6E-54 T 23-04-2016 IPR013126 Heat shock protein 70 family RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 PRINTS PR00301 70kDa heat shock protein signature 20 33 5.6E-54 T 23-04-2016 IPR013126 Heat shock protein 70 family RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 619 43.723 T 23-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 SUPERFAMILY SSF53067 20 194 9.81E-53 T 23-04-2016 RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 334 348 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 Gene3D G3DSA:3.30.420.40 316 358 3.5E-31 T 23-04-2016 RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 Gene3D G3DSA:3.30.420.40 204 236 3.5E-31 T 23-04-2016 RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 Gene3D G3DSA:3.30.420.40 131 203 8.4E-53 T 23-04-2016 RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 Gene3D G3DSA:3.30.420.40 20 69 8.4E-53 T 23-04-2016 RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 203 216 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 Gene3D G3DSA:3.90.640.10 237 312 2.4E-6 T 23-04-2016 RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 SUPERFAMILY SSF100934 507 617 6.08E-34 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 617 6.9E-275 T 23-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 Gene3D G3DSA:3.30.30.30 70 112 1.9E-6 T 23-04-2016 RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 SUPERFAMILY SSF100920 387 537 3.92E-48 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 Gene3D G3DSA:1.20.1270.10 531 617 1.4E-28 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 PANTHER PTHR19375:SF176 19 569 4.7E-264 T 23-04-2016 RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 SUPERFAMILY SSF53067 198 378 2.46E-49 T 23-04-2016 RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 Gene3D G3DSA:2.60.34.10 390 530 6.9E-52 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RR42_RS06050 a45c61acde292623cb02bbc7c3ccc3c1 620 PANTHER PTHR19375 19 569 4.7E-264 T 23-04-2016 RR42_RS12375 f2a141f0437f4fc849a18b3c78f14918 310 SUPERFAMILY SSF53850 89 300 1.78E-36 T 23-04-2016 RR42_RS12375 f2a141f0437f4fc849a18b3c78f14918 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 6.2E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS12375 f2a141f0437f4fc849a18b3c78f14918 310 Pfam PF03466 LysR substrate binding domain 88 297 3.5E-42 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS12375 f2a141f0437f4fc849a18b3c78f14918 310 PANTHER PTHR30346 1 310 9.5E-92 T 23-04-2016 RR42_RS12375 f2a141f0437f4fc849a18b3c78f14918 310 Gene3D G3DSA:1.10.10.10 1 86 7.7E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS12375 f2a141f0437f4fc849a18b3c78f14918 310 PANTHER PTHR30346:SF6 1 310 9.5E-92 T 23-04-2016 RR42_RS12375 f2a141f0437f4fc849a18b3c78f14918 310 Gene3D G3DSA:3.40.190.10 177 268 2.8E-33 T 23-04-2016 RR42_RS12375 f2a141f0437f4fc849a18b3c78f14918 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.2E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS12375 f2a141f0437f4fc849a18b3c78f14918 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.2E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS12375 f2a141f0437f4fc849a18b3c78f14918 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.2E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS12375 f2a141f0437f4fc849a18b3c78f14918 310 SUPERFAMILY SSF46785 2 83 4.36E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS12375 f2a141f0437f4fc849a18b3c78f14918 310 Gene3D G3DSA:3.40.190.10 89 176 8.2E-25 T 23-04-2016 RR42_RS02930 bacbce7506a6f3afc9313200deb44ede 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 1.4E-14 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS02930 bacbce7506a6f3afc9313200deb44ede 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 1.4E-14 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS02930 bacbce7506a6f3afc9313200deb44ede 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 1.4E-14 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS02930 bacbce7506a6f3afc9313200deb44ede 156 Pfam PF01037 Lrp/AsnC ligand binding domain 72 146 1.4E-26 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RR42_RS02930 bacbce7506a6f3afc9313200deb44ede 156 PANTHER PTHR30154 1 155 3.2E-61 T 23-04-2016 RR42_RS02930 bacbce7506a6f3afc9313200deb44ede 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 52 1.1E-18 T 23-04-2016 RR42_RS02930 bacbce7506a6f3afc9313200deb44ede 156 SMART SM00344 6 115 5.2E-46 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RR42_RS02930 bacbce7506a6f3afc9313200deb44ede 156 Gene3D G3DSA:1.10.10.10 7 56 1.9E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS02930 bacbce7506a6f3afc9313200deb44ede 156 SUPERFAMILY SSF46785 4 95 4.78E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS02930 bacbce7506a6f3afc9313200deb44ede 156 PANTHER PTHR30154:SF28 1 155 3.2E-61 T 23-04-2016 RR42_RS02930 bacbce7506a6f3afc9313200deb44ede 156 Gene3D G3DSA:3.30.70.920 59 143 6.4E-32 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RR42_RS02930 bacbce7506a6f3afc9313200deb44ede 156 SUPERFAMILY SSF54909 66 155 6.17E-24 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RR42_RS05200 ca74edc7c6f3e2dc38200934db0759a6 899 Gene3D G3DSA:1.10.390.10 308 455 2.2E-31 T 23-04-2016 RR42_RS05200 ca74edc7c6f3e2dc38200934db0759a6 899 SUPERFAMILY SSF63737 10 192 6.93E-41 T 23-04-2016 RR42_RS05200 ca74edc7c6f3e2dc38200934db0759a6 899 Gene3D G3DSA:1.25.50.10 562 898 1.2E-133 T 23-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal RR42_RS05200 ca74edc7c6f3e2dc38200934db0759a6 899 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 14 897 0.0 T 23-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 RR42_RS05200 ca74edc7c6f3e2dc38200934db0759a6 899 Pfam PF01433 Peptidase family M1 113 388 2.2E-62 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RR42_RS05200 ca74edc7c6f3e2dc38200934db0759a6 899 PANTHER PTHR11533 625 897 0.0 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 RR42_RS05200 ca74edc7c6f3e2dc38200934db0759a6 899 PANTHER PTHR11533 3 601 0.0 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 RR42_RS05200 ca74edc7c6f3e2dc38200934db0759a6 899 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 325 5.4E-10 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RR42_RS05200 ca74edc7c6f3e2dc38200934db0759a6 899 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 176 191 5.4E-10 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RR42_RS05200 ca74edc7c6f3e2dc38200934db0759a6 899 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 5.4E-10 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RR42_RS05200 ca74edc7c6f3e2dc38200934db0759a6 899 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 258 268 5.4E-10 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RR42_RS05200 ca74edc7c6f3e2dc38200934db0759a6 899 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 294 309 5.4E-10 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RR42_RS05200 ca74edc7c6f3e2dc38200934db0759a6 899 Pfam PF11940 Domain of unknown function (DUF3458) 463 855 4.8E-146 T 23-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal RR42_RS05200 ca74edc7c6f3e2dc38200934db0759a6 899 SUPERFAMILY SSF55486 207 454 2.2E-73 T 23-04-2016 RR42_RS05200 ca74edc7c6f3e2dc38200934db0759a6 899 PANTHER PTHR11533:SF152 625 897 0.0 T 23-04-2016 RR42_RS05200 ca74edc7c6f3e2dc38200934db0759a6 899 PANTHER PTHR11533:SF152 3 601 0.0 T 23-04-2016 RR42_RS17520 5a9e569a488b151e8262d22116f252c3 201 PIRSF PIRSF006386 1 201 2.1E-52 T 23-04-2016 IPR014440 HCCA isomerase/glutathione S-transferase kappa RR42_RS17520 5a9e569a488b151e8262d22116f252c3 201 SUPERFAMILY SSF52833 1 199 1.12E-38 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS17520 5a9e569a488b151e8262d22116f252c3 201 Pfam PF01323 DSBA-like thioredoxin domain 5 199 1.6E-33 T 23-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 RR42_RS17520 5a9e569a488b151e8262d22116f252c3 201 PANTHER PTHR13887 1 200 2.5E-27 T 23-04-2016 RR42_RS17520 5a9e569a488b151e8262d22116f252c3 201 Gene3D G3DSA:3.40.30.10 1 199 7.4E-49 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS11365 c175c55690a3511af9610b0bc1b987a7 306 Pfam PF03466 LysR substrate binding domain 95 294 1.0E-21 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS11365 c175c55690a3511af9610b0bc1b987a7 306 Gene3D G3DSA:1.10.10.10 1 82 4.1E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS11365 c175c55690a3511af9610b0bc1b987a7 306 SUPERFAMILY SSF53850 95 292 6.52E-28 T 23-04-2016 RR42_RS11365 c175c55690a3511af9610b0bc1b987a7 306 PANTHER PTHR30126:SF32 1 285 1.1E-60 T 23-04-2016 RR42_RS11365 c175c55690a3511af9610b0bc1b987a7 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.4E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS11365 c175c55690a3511af9610b0bc1b987a7 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.4E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS11365 c175c55690a3511af9610b0bc1b987a7 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.4E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS11365 c175c55690a3511af9610b0bc1b987a7 306 PANTHER PTHR30126 1 285 1.1E-60 T 23-04-2016 RR42_RS11365 c175c55690a3511af9610b0bc1b987a7 306 SUPERFAMILY SSF46785 1 80 1.27E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS11365 c175c55690a3511af9610b0bc1b987a7 306 Gene3D G3DSA:3.40.190.10 179 255 2.2E-4 T 23-04-2016 RR42_RS11365 c175c55690a3511af9610b0bc1b987a7 306 Gene3D G3DSA:3.40.190.10 94 178 8.4E-13 T 23-04-2016 RR42_RS11365 c175c55690a3511af9610b0bc1b987a7 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.1E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS15925 2b4517901338e836cb3b86591be33a09 469 SUPERFAMILY SSF48557 12 468 4.56E-148 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 RR42_RS15925 2b4517901338e836cb3b86591be33a09 469 PRINTS PR00149 Fumarate lyase superfamily signature 239 266 5.0E-30 T 23-04-2016 IPR000362 Fumarate lyase family RR42_RS15925 2b4517901338e836cb3b86591be33a09 469 PRINTS PR00149 Fumarate lyase superfamily signature 110 128 5.0E-30 T 23-04-2016 IPR000362 Fumarate lyase family RR42_RS15925 2b4517901338e836cb3b86591be33a09 469 PRINTS PR00149 Fumarate lyase superfamily signature 283 299 5.0E-30 T 23-04-2016 IPR000362 Fumarate lyase family RR42_RS15925 2b4517901338e836cb3b86591be33a09 469 PRINTS PR00149 Fumarate lyase superfamily signature 155 173 5.0E-30 T 23-04-2016 IPR000362 Fumarate lyase family RR42_RS15925 2b4517901338e836cb3b86591be33a09 469 PRINTS PR00145 Argininosuccinate lyase family signature 150 170 5.7E-69 T 23-04-2016 RR42_RS15925 2b4517901338e836cb3b86591be33a09 469 PRINTS PR00145 Argininosuccinate lyase family signature 318 337 5.7E-69 T 23-04-2016 RR42_RS15925 2b4517901338e836cb3b86591be33a09 469 PRINTS PR00145 Argininosuccinate lyase family signature 109 131 5.7E-69 T 23-04-2016 RR42_RS15925 2b4517901338e836cb3b86591be33a09 469 PRINTS PR00145 Argininosuccinate lyase family signature 201 217 5.7E-69 T 23-04-2016 RR42_RS15925 2b4517901338e836cb3b86591be33a09 469 PRINTS PR00145 Argininosuccinate lyase family signature 283 299 5.7E-69 T 23-04-2016 RR42_RS15925 2b4517901338e836cb3b86591be33a09 469 PRINTS PR00145 Argininosuccinate lyase family signature 239 263 5.7E-69 T 23-04-2016 RR42_RS15925 2b4517901338e836cb3b86591be33a09 469 Hamap MF_00006 Argininosuccinate lyase [argH]. 10 467 43.221 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RR42_RS15925 2b4517901338e836cb3b86591be33a09 469 PANTHER PTHR11444:SF3 12 469 2.4E-220 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RR42_RS15925 2b4517901338e836cb3b86591be33a09 469 Gene3D G3DSA:1.20.200.10 115 381 6.7E-111 T 23-04-2016 RR42_RS15925 2b4517901338e836cb3b86591be33a09 469 Gene3D G3DSA:1.10.275.10 11 114 1.0E-36 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal RR42_RS15925 2b4517901338e836cb3b86591be33a09 469 ProSitePatterns PS00163 Fumarate lyases signature. 283 292 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 RR42_RS15925 2b4517901338e836cb3b86591be33a09 469 TIGRFAM TIGR00838 argH: argininosuccinate lyase 12 468 1.2E-182 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RR42_RS15925 2b4517901338e836cb3b86591be33a09 469 Pfam PF14698 Argininosuccinate lyase C-terminal 371 445 2.1E-23 T 23-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RR42_RS15925 2b4517901338e836cb3b86591be33a09 469 PANTHER PTHR11444 12 469 2.4E-220 T 23-04-2016 IPR000362 Fumarate lyase family RR42_RS15925 2b4517901338e836cb3b86591be33a09 469 Pfam PF00206 Lyase 15 308 8.6E-76 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal RR42_RS15925 2b4517901338e836cb3b86591be33a09 469 Gene3D G3DSA:1.10.40.30 382 445 2.1E-28 T 23-04-2016 RR42_RS12480 84d673f8f034968e59272b80f819743b 343 PANTHER PTHR11795 33 340 7.3E-122 T 23-04-2016 RR42_RS12480 84d673f8f034968e59272b80f819743b 343 PANTHER PTHR11795:SF381 33 340 7.3E-122 T 23-04-2016 RR42_RS12480 84d673f8f034968e59272b80f819743b 343 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 330 5.1E-34 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RR42_RS15325 d78fc464908cc7d9f12c59e9c391410f 410 PIRSF PIRSF003085 6 406 7.9E-126 T 23-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 RR42_RS15325 d78fc464908cc7d9f12c59e9c391410f 410 PANTHER PTHR10108:SF743 113 305 1.5E-106 T 23-04-2016 RR42_RS15325 d78fc464908cc7d9f12c59e9c391410f 410 PANTHER PTHR10108:SF743 322 406 1.5E-106 T 23-04-2016 RR42_RS15325 d78fc464908cc7d9f12c59e9c391410f 410 Pfam PF02353 Mycolic acid cyclopropane synthetase 115 385 4.6E-98 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS15325 d78fc464908cc7d9f12c59e9c391410f 410 SUPERFAMILY SSF53335 123 389 5.52E-77 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS15325 d78fc464908cc7d9f12c59e9c391410f 410 PANTHER PTHR10108 113 305 1.5E-106 T 23-04-2016 RR42_RS15325 d78fc464908cc7d9f12c59e9c391410f 410 PANTHER PTHR10108 322 406 1.5E-106 T 23-04-2016 RR42_RS15325 d78fc464908cc7d9f12c59e9c391410f 410 Gene3D G3DSA:3.40.50.150 113 388 1.9E-96 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS06930 ee3b25c8b34f6e840aa54388861f5606 108 Pfam PF09397 Ftsk gamma domain 3 46 1.6E-9 T 23-04-2016 IPR018541 FtsK gamma domain RR42_RS06930 ee3b25c8b34f6e840aa54388861f5606 108 SMART SM00843 3 53 2.1E-4 T 23-04-2016 IPR018541 FtsK gamma domain RR42_RS06930 ee3b25c8b34f6e840aa54388861f5606 108 SUPERFAMILY SSF46785 3 47 3.94E-7 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS06930 ee3b25c8b34f6e840aa54388861f5606 108 Gene3D G3DSA:1.20.5.340 58 103 1.5E-4 T 23-04-2016 RR42_RS09490 f4f88423ab5782d92fa5b46755a5b328 252 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 212 2.1E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS09490 f4f88423ab5782d92fa5b46755a5b328 252 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 111 4.5E-31 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RR42_RS09490 f4f88423ab5782d92fa5b46755a5b328 252 Gene3D G3DSA:1.10.3720.10 14 211 2.7E-40 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS09490 f4f88423ab5782d92fa5b46755a5b328 252 SUPERFAMILY SSF161098 17 202 5.63E-41 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS09490 f4f88423ab5782d92fa5b46755a5b328 252 PANTHER PTHR30614 1 222 3.9E-78 T 23-04-2016 RR42_RS09490 f4f88423ab5782d92fa5b46755a5b328 252 PANTHER PTHR30614:SF18 1 222 3.9E-78 T 23-04-2016 RR42_RS01590 5ed289d3331e4394c23658e615d6e5cd 468 Gene3D G3DSA:3.40.640.10 139 361 2.9E-64 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS01590 5ed289d3331e4394c23658e615d6e5cd 468 PANTHER PTHR11751:SF386 93 462 2.6E-119 T 23-04-2016 RR42_RS01590 5ed289d3331e4394c23658e615d6e5cd 468 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 1.3E-5 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS01590 5ed289d3331e4394c23658e615d6e5cd 468 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 1.3E-5 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS01590 5ed289d3331e4394c23658e615d6e5cd 468 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 8.3E-18 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS01590 5ed289d3331e4394c23658e615d6e5cd 468 PANTHER PTHR11751 93 462 2.6E-119 T 23-04-2016 RR42_RS01590 5ed289d3331e4394c23658e615d6e5cd 468 SMART SM00345 17 76 3.6E-20 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS01590 5ed289d3331e4394c23658e615d6e5cd 468 SUPERFAMILY SSF46785 9 83 5.9E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS01590 5ed289d3331e4394c23658e615d6e5cd 468 SUPERFAMILY SSF53383 105 455 6.65E-82 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS01590 5ed289d3331e4394c23658e615d6e5cd 468 Gene3D G3DSA:3.90.1150.10 363 447 6.6E-9 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS01590 5ed289d3331e4394c23658e615d6e5cd 468 Gene3D G3DSA:1.10.10.10 11 78 1.2E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS01590 5ed289d3331e4394c23658e615d6e5cd 468 Pfam PF00155 Aminotransferase class I and II 117 449 1.4E-35 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RR42_RS07435 de62506d90089549ded39d2ac3d80ce8 469 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 17 452 5.5E-137 T 23-04-2016 IPR004452 4Fe-4S binding protein GO:0019516 RR42_RS07435 de62506d90089549ded39d2ac3d80ce8 469 Gene3D G3DSA:3.40.50.10420 62 125 4.9E-45 T 23-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RR42_RS07435 de62506d90089549ded39d2ac3d80ce8 469 Gene3D G3DSA:3.40.50.10420 187 293 4.9E-45 T 23-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RR42_RS07435 de62506d90089549ded39d2ac3d80ce8 469 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 68 292 1.4E-51 T 23-04-2016 IPR003741 LUD domain RR42_RS07435 de62506d90089549ded39d2ac3d80ce8 469 SUPERFAMILY SSF54862 304 400 8.37E-15 T 23-04-2016 RR42_RS07435 de62506d90089549ded39d2ac3d80ce8 469 Pfam PF11870 Domain of unknown function (DUF3390) 391 467 2.6E-11 T 23-04-2016 IPR024569 4Fe-4S binding protein, C-terminal RR42_RS07435 de62506d90089549ded39d2ac3d80ce8 469 PANTHER PTHR32479 34 468 2.2E-157 T 23-04-2016 RR42_RS07435 de62506d90089549ded39d2ac3d80ce8 469 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 310 321 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RR42_RS07435 de62506d90089549ded39d2ac3d80ce8 469 Gene3D G3DSA:1.10.1060.10 305 397 1.4E-12 T 23-04-2016 RR42_RS07435 de62506d90089549ded39d2ac3d80ce8 469 PANTHER PTHR32479:SF10 34 468 2.2E-157 T 23-04-2016 RR42_RS07435 de62506d90089549ded39d2ac3d80ce8 469 Pfam PF13183 4Fe-4S dicluster domain 307 374 4.0E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RR42_RS07435 de62506d90089549ded39d2ac3d80ce8 469 SUPERFAMILY SSF100950 132 293 1.88E-35 T 23-04-2016 RR42_RS07435 de62506d90089549ded39d2ac3d80ce8 469 SUPERFAMILY SSF100950 62 86 1.88E-35 T 23-04-2016 RR42_RS09840 1971f786d8b46135057fbc475263725c 264 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 30 118 4.5E-20 T 23-04-2016 IPR029095 NarX-like, N-terminal RR42_RS09840 1971f786d8b46135057fbc475263725c 264 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 149 234 7.6E-8 T 23-04-2016 IPR029095 NarX-like, N-terminal RR42_RS13395 83e805bae22db86d1af9e836cab61427 295 PANTHER PTHR12277 87 286 1.2E-21 T 23-04-2016 RR42_RS13395 83e805bae22db86d1af9e836cab61427 295 Gene3D G3DSA:3.40.50.1820 69 285 5.1E-24 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS13395 83e805bae22db86d1af9e836cab61427 295 SUPERFAMILY SSF53474 53 285 3.3E-28 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS13395 83e805bae22db86d1af9e836cab61427 295 Pfam PF12146 Serine aminopeptidase, S33 88 209 2.4E-8 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 RR42_RS13085 f68e1b992a3c1512fd1916a0f8f86b4d 186 SUPERFAMILY SSF53271 5 179 2.13E-35 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS13085 f68e1b992a3c1512fd1916a0f8f86b4d 186 Gene3D G3DSA:3.40.50.2020 9 167 1.4E-35 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS13085 f68e1b992a3c1512fd1916a0f8f86b4d 186 Pfam PF00156 Phosphoribosyl transferase domain 14 161 4.7E-27 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RR42_RS20440 39d0ace584b5e7417dfca7bae1884bed 822 Gene3D G3DSA:3.30.565.10 655 807 1.2E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS20440 39d0ace584b5e7417dfca7bae1884bed 822 SUPERFAMILY SSF55785 438 570 6.85E-9 T 23-04-2016 IPR000014 PAS domain RR42_RS20440 39d0ace584b5e7417dfca7bae1884bed 822 PANTHER PTHR24423 4 32 2.5E-50 T 23-04-2016 RR42_RS20440 39d0ace584b5e7417dfca7bae1884bed 822 PANTHER PTHR24423 425 802 2.5E-50 T 23-04-2016 RR42_RS20440 39d0ace584b5e7417dfca7bae1884bed 822 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 696 806 1.4E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS20440 39d0ace584b5e7417dfca7bae1884bed 822 SUPERFAMILY SSF47384 577 649 7.85E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS20440 39d0ace584b5e7417dfca7bae1884bed 822 SMART SM00388 580 652 3.6E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS20440 39d0ace584b5e7417dfca7bae1884bed 822 Gene3D G3DSA:1.10.287.130 580 648 6.3E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS20440 39d0ace584b5e7417dfca7bae1884bed 822 SMART SM00387 696 822 1.6E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS20440 39d0ace584b5e7417dfca7bae1884bed 822 SMART SM00304 382 434 8.3E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS20440 39d0ace584b5e7417dfca7bae1884bed 822 PRINTS PR00344 Bacterial sensor protein C-terminal signature 749 763 7.8E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS20440 39d0ace584b5e7417dfca7bae1884bed 822 PRINTS PR00344 Bacterial sensor protein C-terminal signature 778 796 7.8E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS20440 39d0ace584b5e7417dfca7bae1884bed 822 PRINTS PR00344 Bacterial sensor protein C-terminal signature 767 777 7.8E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS20440 39d0ace584b5e7417dfca7bae1884bed 822 Pfam PF00672 HAMP domain 364 430 4.9E-13 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS20440 39d0ace584b5e7417dfca7bae1884bed 822 Pfam PF13188 PAS domain 448 501 1.1E-4 T 23-04-2016 IPR000014 PAS domain RR42_RS20440 39d0ace584b5e7417dfca7bae1884bed 822 Gene3D G3DSA:3.30.450.20 439 571 3.1E-12 T 23-04-2016 RR42_RS20440 39d0ace584b5e7417dfca7bae1884bed 822 SUPERFAMILY SSF158472 384 431 7.06E-9 T 23-04-2016 RR42_RS20440 39d0ace584b5e7417dfca7bae1884bed 822 SUPERFAMILY SSF55874 642 806 3.54E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS20440 39d0ace584b5e7417dfca7bae1884bed 822 PANTHER PTHR24423:SF471 4 32 2.5E-50 T 23-04-2016 RR42_RS20440 39d0ace584b5e7417dfca7bae1884bed 822 PANTHER PTHR24423:SF471 425 802 2.5E-50 T 23-04-2016 RR42_RS20440 39d0ace584b5e7417dfca7bae1884bed 822 Pfam PF00512 His Kinase A (phospho-acceptor) domain 581 648 1.1E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS19310 87149d7ee925a6f66dd4d32d06c27ef1 621 SMART SM00341 545 621 6.2E-13 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 RR42_RS19310 87149d7ee925a6f66dd4d32d06c27ef1 621 SMART SM00490 251 332 1.4E-24 T 23-04-2016 IPR001650 Helicase, C-terminal RR42_RS19310 87149d7ee925a6f66dd4d32d06c27ef1 621 Gene3D G3DSA:3.40.50.300 3 199 2.4E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS19310 87149d7ee925a6f66dd4d32d06c27ef1 621 Pfam PF16124 RecQ zinc-binding 344 405 9.2E-17 T 23-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain RR42_RS19310 87149d7ee925a6f66dd4d32d06c27ef1 621 PANTHER PTHR13710 1 620 2.5E-274 T 23-04-2016 RR42_RS19310 87149d7ee925a6f66dd4d32d06c27ef1 621 Pfam PF00570 HRDC domain 550 615 3.3E-23 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 RR42_RS19310 87149d7ee925a6f66dd4d32d06c27ef1 621 Pfam PF00271 Helicase conserved C-terminal domain 235 332 3.1E-15 T 23-04-2016 IPR001650 Helicase, C-terminal RR42_RS19310 87149d7ee925a6f66dd4d32d06c27ef1 621 SUPERFAMILY SSF52540 203 463 2.12E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS19310 87149d7ee925a6f66dd4d32d06c27ef1 621 Gene3D G3DSA:1.10.10.10 346 522 5.9E-57 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19310 87149d7ee925a6f66dd4d32d06c27ef1 621 PANTHER PTHR13710:SF81 1 620 2.5E-274 T 23-04-2016 RR42_RS19310 87149d7ee925a6f66dd4d32d06c27ef1 621 SUPERFAMILY SSF52540 4 200 8.52E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS19310 87149d7ee925a6f66dd4d32d06c27ef1 621 Pfam PF00270 DEAD/DEAH box helicase 21 180 1.7E-19 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RR42_RS19310 87149d7ee925a6f66dd4d32d06c27ef1 621 Gene3D G3DSA:1.10.150.80 552 616 2.7E-15 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 RR42_RS19310 87149d7ee925a6f66dd4d32d06c27ef1 621 SUPERFAMILY SSF47819 543 617 3.49E-21 T 23-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 RR42_RS19310 87149d7ee925a6f66dd4d32d06c27ef1 621 Pfam PF09382 RQC domain 407 523 4.0E-40 T 23-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 RR42_RS19310 87149d7ee925a6f66dd4d32d06c27ef1 621 Gene3D G3DSA:3.40.50.300 201 345 2.8E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS19310 87149d7ee925a6f66dd4d32d06c27ef1 621 SMART SM00487 13 213 2.2E-30 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RR42_RS19310 87149d7ee925a6f66dd4d32d06c27ef1 621 SMART SM00956 412 519 1.5E-53 T 23-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 RR42_RS15480 06306a24154afae846ec74d6ee1290c9 134 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 6 127 3.1E-50 T 23-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- RR42_RS15480 06306a24154afae846ec74d6ee1290c9 134 Pfam PF03061 Thioesterase superfamily 18 102 1.5E-18 T 23-04-2016 IPR006683 Thioesterase domain RR42_RS15480 06306a24154afae846ec74d6ee1290c9 134 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 8 122 2.5E-35 T 23-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RR42_RS15480 06306a24154afae846ec74d6ee1290c9 134 Gene3D G3DSA:3.10.129.10 4 131 7.9E-51 T 23-04-2016 IPR029069 HotDog domain RR42_RS15480 06306a24154afae846ec74d6ee1290c9 134 PANTHER PTHR31793 6 131 1.4E-44 T 23-04-2016 RR42_RS15480 06306a24154afae846ec74d6ee1290c9 134 PANTHER PTHR31793:SF9 6 131 1.4E-44 T 23-04-2016 RR42_RS15480 06306a24154afae846ec74d6ee1290c9 134 PIRSF PIRSF003230 1 134 3.0E-45 T 23-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RR42_RS15480 06306a24154afae846ec74d6ee1290c9 134 SUPERFAMILY SSF54637 5 130 8.97E-43 T 23-04-2016 IPR029069 HotDog domain RR42_RS17910 379fe0c6b1271b047f2c6cbda9b0d5e8 279 SUPERFAMILY SSF51215 29 106 3.27E-16 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RR42_RS17910 379fe0c6b1271b047f2c6cbda9b0d5e8 279 Gene3D G3DSA:2.60.120.280 156 187 7.2E-16 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RR42_RS17910 379fe0c6b1271b047f2c6cbda9b0d5e8 279 Gene3D G3DSA:2.60.120.280 28 100 7.2E-16 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RR42_RS17910 379fe0c6b1271b047f2c6cbda9b0d5e8 279 Gene3D G3DSA:1.10.10.60 188 231 1.6E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS17910 379fe0c6b1271b047f2c6cbda9b0d5e8 279 SMART SM00342 193 275 5.7E-28 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RR42_RS17910 379fe0c6b1271b047f2c6cbda9b0d5e8 279 SUPERFAMILY SSF46689 178 226 8.51E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS17910 379fe0c6b1271b047f2c6cbda9b0d5e8 279 Pfam PF02311 AraC-like ligand binding domain 30 106 2.6E-13 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RR42_RS17910 379fe0c6b1271b047f2c6cbda9b0d5e8 279 Gene3D G3DSA:1.10.10.60 232 277 4.8E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS17910 379fe0c6b1271b047f2c6cbda9b0d5e8 279 Pfam PF12833 Helix-turn-helix domain 199 277 1.7E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RR42_RS17910 379fe0c6b1271b047f2c6cbda9b0d5e8 279 SUPERFAMILY SSF46689 229 277 1.66E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS17910 379fe0c6b1271b047f2c6cbda9b0d5e8 279 PANTHER PTHR11019 16 279 3.1E-43 T 23-04-2016 RR42_RS17910 379fe0c6b1271b047f2c6cbda9b0d5e8 279 PANTHER PTHR11019:SF75 16 279 3.1E-43 T 23-04-2016 RR42_RS16270 8f75e473786bde878d25591e7f582c38 559 Gene3D G3DSA:3.30.413.10 120 278 2.7E-39 T 23-04-2016 RR42_RS16270 8f75e473786bde878d25591e7f582c38 559 PANTHER PTHR11493:SF47 327 552 7.7E-158 T 23-04-2016 RR42_RS16270 8f75e473786bde878d25591e7f582c38 559 PANTHER PTHR11493:SF47 1 294 7.7E-158 T 23-04-2016 RR42_RS16270 8f75e473786bde878d25591e7f582c38 559 SUPERFAMILY SSF56014 120 287 6.15E-46 T 23-04-2016 RR42_RS16270 8f75e473786bde878d25591e7f582c38 559 Gene3D G3DSA:3.90.480.10 48 117 9.3E-37 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RR42_RS16270 8f75e473786bde878d25591e7f582c38 559 Gene3D G3DSA:3.90.480.10 321 404 9.3E-37 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RR42_RS16270 8f75e473786bde878d25591e7f582c38 559 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 50 110 7.7E-16 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RR42_RS16270 8f75e473786bde878d25591e7f582c38 559 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 333 399 7.0E-13 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RR42_RS16270 8f75e473786bde878d25591e7f582c38 559 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 452 549 2.8E-13 T 23-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RR42_RS16270 8f75e473786bde878d25591e7f582c38 559 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 274 6.6E-39 T 23-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RR42_RS16270 8f75e473786bde878d25591e7f582c38 559 PANTHER PTHR11493 327 552 7.7E-158 T 23-04-2016 RR42_RS16270 8f75e473786bde878d25591e7f582c38 559 PANTHER PTHR11493 1 294 7.7E-158 T 23-04-2016 RR42_RS16270 8f75e473786bde878d25591e7f582c38 559 SUPERFAMILY SSF55124 315 422 2.45E-25 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RR42_RS16270 8f75e473786bde878d25591e7f582c38 559 SUPERFAMILY SSF55124 252 276 2.45E-25 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RR42_RS16270 8f75e473786bde878d25591e7f582c38 559 SUPERFAMILY SSF55124 1 126 5.56E-32 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RR42_RS16270 8f75e473786bde878d25591e7f582c38 559 SUPERFAMILY SSF56014 410 551 8.64E-41 T 23-04-2016 RR42_RS16270 8f75e473786bde878d25591e7f582c38 559 Gene3D G3DSA:3.30.413.10 409 549 1.9E-37 T 23-04-2016 RR42_RS16270 8f75e473786bde878d25591e7f582c38 559 PRINTS PR00397 Sirohaem Fe-binding site signature 457 475 9.075952E-5 T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RR42_RS16270 8f75e473786bde878d25591e7f582c38 559 PRINTS PR00397 Sirohaem Fe-binding site signature 411 429 9.075952E-5 T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RR42_RS03375 a031c60a21de794c2a010e0def356964 496 PIRSF PIRSF000110 3 496 2.6E-164 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RR42_RS03375 a031c60a21de794c2a010e0def356964 496 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 12 494 1.2E-164 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RR42_RS03375 a031c60a21de794c2a010e0def356964 496 SUPERFAMILY SSF55347 179 493 9.16E-113 T 23-04-2016 RR42_RS03375 a031c60a21de794c2a010e0def356964 496 PANTHER PTHR23429:SF0 14 495 2.4E-198 T 23-04-2016 RR42_RS03375 a031c60a21de794c2a010e0def356964 496 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 179 185 - T 23-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RR42_RS03375 a031c60a21de794c2a010e0def356964 496 SUPERFAMILY SSF51735 8 192 1.18E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS03375 a031c60a21de794c2a010e0def356964 496 Gene3D G3DSA:3.40.50.720 11 188 2.0E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS03375 a031c60a21de794c2a010e0def356964 496 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 11 494 76.377 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RR42_RS03375 a031c60a21de794c2a010e0def356964 496 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 239 255 1.1E-48 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RR42_RS03375 a031c60a21de794c2a010e0def356964 496 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 169 197 1.1E-48 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RR42_RS03375 a031c60a21de794c2a010e0def356964 496 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 145 158 1.1E-48 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RR42_RS03375 a031c60a21de794c2a010e0def356964 496 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 330 356 1.1E-48 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RR42_RS03375 a031c60a21de794c2a010e0def356964 496 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 221 238 1.1E-48 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RR42_RS03375 a031c60a21de794c2a010e0def356964 496 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 15 189 1.0E-52 T 23-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RR42_RS03375 a031c60a21de794c2a010e0def356964 496 Gene3D G3DSA:3.30.360.10 189 493 8.4E-118 T 23-04-2016 RR42_RS03375 a031c60a21de794c2a010e0def356964 496 PANTHER PTHR23429 14 495 2.4E-198 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RR42_RS03375 a031c60a21de794c2a010e0def356964 496 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 191 493 1.3E-110 T 23-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RR42_RS02935 524286e9a646b46cf8caa58ec84b5751 312 Gene3D G3DSA:3.40.366.10 191 286 1.0E-50 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RR42_RS02935 524286e9a646b46cf8caa58ec84b5751 312 Gene3D G3DSA:3.40.366.10 2 116 1.0E-50 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RR42_RS02935 524286e9a646b46cf8caa58ec84b5751 312 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 307 9.7E-20 T 23-04-2016 IPR020801 Polyketide synthase, acyl transferase domain RR42_RS02935 524286e9a646b46cf8caa58ec84b5751 312 PANTHER PTHR10982 1 279 1.3E-65 T 23-04-2016 RR42_RS02935 524286e9a646b46cf8caa58ec84b5751 312 Gene3D G3DSA:3.30.70.250 123 190 4.5E-14 T 23-04-2016 RR42_RS02935 524286e9a646b46cf8caa58ec84b5751 312 SUPERFAMILY SSF52151 192 285 1.24E-51 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RR42_RS02935 524286e9a646b46cf8caa58ec84b5751 312 SUPERFAMILY SSF52151 3 122 1.24E-51 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RR42_RS02935 524286e9a646b46cf8caa58ec84b5751 312 Pfam PF00698 Acyl transferase domain 5 277 3.9E-29 T 23-04-2016 IPR014043 Acyl transferase RR42_RS02935 524286e9a646b46cf8caa58ec84b5751 312 PIRSF PIRSF000446 1 301 8.3E-57 T 23-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 RR42_RS02935 524286e9a646b46cf8caa58ec84b5751 312 TIGRFAM TIGR03131 malonate_mdcH: malonate decarboxylase, epsilon subunit 4 301 3.7E-105 T 23-04-2016 IPR017554 Malonate decarboxylase, McdH subunit RR42_RS02935 524286e9a646b46cf8caa58ec84b5751 312 SUPERFAMILY SSF55048 123 185 1.96E-10 T 23-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 RR42_RS08805 0f4c4cc020dc40daa2bd92b01137a048 227 Pfam PF02665 Nitrate reductase gamma subunit 5 227 3.8E-80 T 23-04-2016 IPR023234 NarG-like domain RR42_RS08805 0f4c4cc020dc40daa2bd92b01137a048 227 SUPERFAMILY SSF103501 1 227 1.19E-64 T 23-04-2016 IPR023234 NarG-like domain RR42_RS08805 0f4c4cc020dc40daa2bd92b01137a048 227 PANTHER PTHR30598:SF3 1 227 2.6E-78 T 23-04-2016 RR42_RS08805 0f4c4cc020dc40daa2bd92b01137a048 227 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 227 5.5E-70 T 23-04-2016 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 RR42_RS08805 0f4c4cc020dc40daa2bd92b01137a048 227 PANTHER PTHR30598 1 227 2.6E-78 T 23-04-2016 RR42_RS08805 0f4c4cc020dc40daa2bd92b01137a048 227 Gene3D G3DSA:1.20.950.20 2 211 4.4E-64 T 23-04-2016 RR42_RS19105 9bad0c9495b36c750909075c3ac7f3ed 422 Gene3D G3DSA:3.30.460.20 147 180 3.7E-4 T 23-04-2016 RR42_RS19105 9bad0c9495b36c750909075c3ac7f3ed 422 SUPERFAMILY SSF143865 146 351 4.97E-15 T 23-04-2016 RR42_RS19105 9bad0c9495b36c750909075c3ac7f3ed 422 SUPERFAMILY SSF144083 354 412 1.05E-18 T 23-04-2016 RR42_RS19105 9bad0c9495b36c750909075c3ac7f3ed 422 PANTHER PTHR21535 306 415 7.5E-24 T 23-04-2016 RR42_RS19105 9bad0c9495b36c750909075c3ac7f3ed 422 PANTHER PTHR21535 214 274 7.5E-24 T 23-04-2016 RR42_RS19105 9bad0c9495b36c750909075c3ac7f3ed 422 Gene3D G3DSA:1.20.58.340 344 413 4.8E-25 T 23-04-2016 RR42_RS19105 9bad0c9495b36c750909075c3ac7f3ed 422 Pfam PF01544 CorA-like Mg2+ transporter protein 149 413 5.9E-38 T 23-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 RR42_RS19105 9bad0c9495b36c750909075c3ac7f3ed 422 Gene3D G3DSA:1.20.58.340 212 338 6.1E-4 T 23-04-2016 RR42_RS03540 6537b8ae9ff0c588fb830490c2aac78d 753 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 642 752 3.6E-29 T 23-04-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal RR42_RS03540 6537b8ae9ff0c588fb830490c2aac78d 753 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 506 612 4.7E-31 T 23-04-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain RR42_RS03540 6537b8ae9ff0c588fb830490c2aac78d 753 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 30 530 4.0E-130 T 23-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset RR42_RS03540 6537b8ae9ff0c588fb830490c2aac78d 753 SUPERFAMILY SSF69279 223 391 6.8E-39 T 23-04-2016 RR42_RS03540 6537b8ae9ff0c588fb830490c2aac78d 753 SUPERFAMILY SSF69349 472 525 3.06E-8 T 23-04-2016 RR42_RS03540 6537b8ae9ff0c588fb830490c2aac78d 753 SUPERFAMILY SSF69255 394 481 7.32E-30 T 23-04-2016 RR42_RS03540 6537b8ae9ff0c588fb830490c2aac78d 753 SUPERFAMILY SSF69279 30 213 4.68E-43 T 23-04-2016 RR42_RS03540 6537b8ae9ff0c588fb830490c2aac78d 753 Gene3D G3DSA:3.55.50.10 128 219 8.0E-24 T 23-04-2016 RR42_RS03540 6537b8ae9ff0c588fb830490c2aac78d 753 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 36 532 9.5E-115 T 23-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein RR42_RS03540 6537b8ae9ff0c588fb830490c2aac78d 753 Pfam PF05954 Phage late control gene D protein (GPD) 42 360 5.9E-96 T 23-04-2016 RR42_RS03540 6537b8ae9ff0c588fb830490c2aac78d 753 PANTHER PTHR32305:SF9 17 510 5.3E-135 T 23-04-2016 RR42_RS03540 6537b8ae9ff0c588fb830490c2aac78d 753 Gene3D G3DSA:2.40.50.230 401 481 1.8E-34 T 23-04-2016 IPR006531 Gp5 N-terminal RR42_RS03540 6537b8ae9ff0c588fb830490c2aac78d 753 PANTHER PTHR32305 17 510 5.3E-135 T 23-04-2016 RR42_RS11790 4c951b9b889c6f4e2383067acd774448 794 SUPERFAMILY SSF52009 353 472 1.44E-34 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RR42_RS11790 4c951b9b889c6f4e2383067acd774448 794 PANTHER PTHR22931:SF7 10 794 0.0 T 23-04-2016 RR42_RS11790 4c951b9b889c6f4e2383067acd774448 794 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 350 1.3E-115 T 23-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 RR42_RS11790 4c951b9b889c6f4e2383067acd774448 794 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 699 717 - T 23-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RR42_RS11790 4c951b9b889c6f4e2383067acd774448 794 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 11 793 0.0 T 23-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 RR42_RS11790 4c951b9b889c6f4e2383067acd774448 794 Gene3D G3DSA:3.20.20.60 486 793 1.7E-99 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS11790 4c951b9b889c6f4e2383067acd774448 794 Gene3D G3DSA:3.50.30.10 378 479 6.1E-37 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RR42_RS11790 4c951b9b889c6f4e2383067acd774448 794 Gene3D G3DSA:3.30.470.20 202 360 2.2E-58 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RR42_RS11790 4c951b9b889c6f4e2383067acd774448 794 Pfam PF00391 PEP-utilising enzyme, mobile domain 389 460 3.5E-26 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RR42_RS11790 4c951b9b889c6f4e2383067acd774448 794 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 419 430 - T 23-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 RR42_RS11790 4c951b9b889c6f4e2383067acd774448 794 SUPERFAMILY SSF56059 10 390 9.18E-106 T 23-04-2016 RR42_RS11790 4c951b9b889c6f4e2383067acd774448 794 PIRSF PIRSF000854 6 794 0.0 T 23-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 RR42_RS11790 4c951b9b889c6f4e2383067acd774448 794 PANTHER PTHR22931 10 794 0.0 T 23-04-2016 RR42_RS11790 4c951b9b889c6f4e2383067acd774448 794 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 485 792 1.7E-59 T 23-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RR42_RS11790 4c951b9b889c6f4e2383067acd774448 794 SUPERFAMILY SSF51621 469 793 1.83E-92 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS11790 4c951b9b889c6f4e2383067acd774448 794 Gene3D G3DSA:3.30.1490.20 9 199 6.3E-68 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RR42_RS14055 9bd82459fac746be1edcb66e245484ed 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 5.1E-11 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RR42_RS14055 9bd82459fac746be1edcb66e245484ed 597 PANTHER PTHR23115 397 595 1.5E-276 T 23-04-2016 RR42_RS14055 9bd82459fac746be1edcb66e245484ed 597 PANTHER PTHR23115 2 373 1.5E-276 T 23-04-2016 RR42_RS14055 9bd82459fac746be1edcb66e245484ed 597 SMART SM00838 398 485 9.8E-4 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain RR42_RS14055 9bd82459fac746be1edcb66e245484ed 597 Gene3D G3DSA:3.30.70.870 291 369 5.9E-26 T 23-04-2016 RR42_RS14055 9bd82459fac746be1edcb66e245484ed 597 Gene3D G3DSA:3.40.50.300 2 192 8.9E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14055 9bd82459fac746be1edcb66e245484ed 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 593 4.6E-49 T 23-04-2016 IPR013842 GTP-binding protein LepA, C-terminal RR42_RS14055 9bd82459fac746be1edcb66e245484ed 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 303.216 T 23-04-2016 IPR006297 Elongation factor 4 GO:0005525 RR42_RS14055 9bd82459fac746be1edcb66e245484ed 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 2.3E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS14055 9bd82459fac746be1edcb66e245484ed 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 2.3E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS14055 9bd82459fac746be1edcb66e245484ed 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 2.3E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS14055 9bd82459fac746be1edcb66e245484ed 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 2.3E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS14055 9bd82459fac746be1edcb66e245484ed 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 2.3E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS14055 9bd82459fac746be1edcb66e245484ed 597 Gene3D G3DSA:3.30.70.240 401 489 3.9E-23 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain RR42_RS14055 9bd82459fac746be1edcb66e245484ed 597 Pfam PF00009 Elongation factor Tu GTP binding domain 3 181 1.0E-51 T 23-04-2016 RR42_RS14055 9bd82459fac746be1edcb66e245484ed 597 SUPERFAMILY SSF52540 2 205 2.63E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14055 9bd82459fac746be1edcb66e245484ed 597 SUPERFAMILY SSF50447 165 288 1.16E-29 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RR42_RS14055 9bd82459fac746be1edcb66e245484ed 597 Pfam PF00679 Elongation factor G C-terminus 399 484 5.0E-24 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain RR42_RS14055 9bd82459fac746be1edcb66e245484ed 597 TIGRFAM TIGR01393 lepA: elongation factor 4 3 594 1.4E-297 T 23-04-2016 IPR006297 Elongation factor 4 GO:0005525 RR42_RS14055 9bd82459fac746be1edcb66e245484ed 597 SUPERFAMILY SSF54980 399 493 5.76E-27 T 23-04-2016 IPR009022 Elongation factor G, III-V domain RR42_RS14055 9bd82459fac746be1edcb66e245484ed 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 174 2.9E-17 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RR42_RS14055 9bd82459fac746be1edcb66e245484ed 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site RR42_RS14055 9bd82459fac746be1edcb66e245484ed 597 Gene3D G3DSA:2.40.30.10 193 290 2.1E-25 T 23-04-2016 RR42_RS14055 9bd82459fac746be1edcb66e245484ed 597 SUPERFAMILY SSF54980 292 370 5.76E-18 T 23-04-2016 IPR009022 Elongation factor G, III-V domain RR42_RS14055 9bd82459fac746be1edcb66e245484ed 597 PANTHER PTHR23115:SF175 397 595 1.5E-276 T 23-04-2016 RR42_RS14055 9bd82459fac746be1edcb66e245484ed 597 PANTHER PTHR23115:SF175 2 373 1.5E-276 T 23-04-2016 RR42_RS00410 d3b3d8b0b4526e969e744be91029da4a 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 4.4E-11 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS00410 d3b3d8b0b4526e969e744be91029da4a 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 129 149 4.4E-11 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS00410 d3b3d8b0b4526e969e744be91029da4a 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 4.4E-11 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS00410 d3b3d8b0b4526e969e744be91029da4a 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 79 4.4E-11 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS00410 d3b3d8b0b4526e969e744be91029da4a 158 Pfam PF12802 MarR family 42 103 4.9E-14 T 23-04-2016 RR42_RS00410 d3b3d8b0b4526e969e744be91029da4a 158 ProSitePatterns PS01117 MarR-type HTH domain signature. 78 112 - T 23-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site RR42_RS00410 d3b3d8b0b4526e969e744be91029da4a 158 Gene3D G3DSA:1.10.10.10 3 155 1.9E-41 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS00410 d3b3d8b0b4526e969e744be91029da4a 158 PANTHER PTHR33164:SF4 2 154 2.5E-36 T 23-04-2016 RR42_RS00410 d3b3d8b0b4526e969e744be91029da4a 158 SMART SM00347 36 139 1.6E-28 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS00410 d3b3d8b0b4526e969e744be91029da4a 158 PANTHER PTHR33164 2 154 2.5E-36 T 23-04-2016 RR42_RS00410 d3b3d8b0b4526e969e744be91029da4a 158 SUPERFAMILY SSF46785 5 153 7.4E-36 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS18990 8def475c403089ac33e66e0936740161 1593 SUPERFAMILY SSF56235 35 460 4.32E-153 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RR42_RS18990 8def475c403089ac33e66e0936740161 1593 PANTHER PTHR11938 973 1506 0.0 T 23-04-2016 RR42_RS18990 8def475c403089ac33e66e0936740161 1593 PANTHER PTHR11938 1527 1578 0.0 T 23-04-2016 RR42_RS18990 8def475c403089ac33e66e0936740161 1593 PANTHER PTHR11938 24 952 0.0 T 23-04-2016 RR42_RS18990 8def475c403089ac33e66e0936740161 1593 PANTHER PTHR11938:SF1 973 1506 0.0 T 23-04-2016 RR42_RS18990 8def475c403089ac33e66e0936740161 1593 PANTHER PTHR11938:SF1 1527 1578 0.0 T 23-04-2016 RR42_RS18990 8def475c403089ac33e66e0936740161 1593 PANTHER PTHR11938:SF1 24 952 0.0 T 23-04-2016 RR42_RS18990 8def475c403089ac33e66e0936740161 1593 Gene3D G3DSA:2.160.20.60 1296 1587 1.2E-104 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RR42_RS18990 8def475c403089ac33e66e0936740161 1593 Gene3D G3DSA:3.20.20.70 472 826 1.3E-112 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS18990 8def475c403089ac33e66e0936740161 1593 SUPERFAMILY SSF69336 1292 1576 2.49E-90 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RR42_RS18990 8def475c403089ac33e66e0936740161 1593 Pfam PF04898 Glutamate synthase central domain 489 775 6.5E-112 T 23-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 RR42_RS18990 8def475c403089ac33e66e0936740161 1593 Pfam PF01645 Conserved region in glutamate synthase 838 1237 1.0E-153 T 23-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 RR42_RS18990 8def475c403089ac33e66e0936740161 1593 Gene3D G3DSA:3.20.20.70 879 1272 6.2E-182 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS18990 8def475c403089ac33e66e0936740161 1593 Gene3D G3DSA:3.60.20.10 35 469 3.9E-188 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RR42_RS18990 8def475c403089ac33e66e0936740161 1593 Pfam PF01493 GXGXG motif 1322 1507 9.0E-81 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RR42_RS18990 8def475c403089ac33e66e0936740161 1593 Pfam PF00310 Glutamine amidotransferases class-II 35 458 4.8E-186 T 23-04-2016 IPR017932 Glutamine amidotransferase type 2 domain RR42_RS18990 8def475c403089ac33e66e0936740161 1593 SUPERFAMILY SSF51395 977 1271 4.89E-263 T 23-04-2016 RR42_RS18990 8def475c403089ac33e66e0936740161 1593 SUPERFAMILY SSF51395 482 949 4.89E-263 T 23-04-2016 RR42_RS03785 df321c2c490d2c5645af6e429efada2c 508 Pfam PF00939 Sodium:sulfate symporter transmembrane region 30 508 4.3E-136 T 23-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RR42_RS03785 df321c2c490d2c5645af6e429efada2c 508 PIRSF PIRSF002457 15 508 3.9E-136 T 23-04-2016 IPR030676 Citrate carrier CitT-related RR42_RS03785 df321c2c490d2c5645af6e429efada2c 508 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 47 502 2.7E-67 T 23-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RR42_RS03785 df321c2c490d2c5645af6e429efada2c 508 PANTHER PTHR10283 23 507 3.0E-69 T 23-04-2016 RR42_RS17110 17eb0dc43f768440d6af463b5f87aede 108 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 7 103 28.469 T 23-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS RR42_RS17110 17eb0dc43f768440d6af463b5f87aede 108 Gene3D G3DSA:3.30.1390.10 12 108 1.8E-41 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RR42_RS17110 17eb0dc43f768440d6af463b5f87aede 108 SUPERFAMILY SSF54736 24 107 7.32E-32 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RR42_RS17110 17eb0dc43f768440d6af463b5f87aede 108 PANTHER PTHR33473 18 106 4.5E-34 T 23-04-2016 RR42_RS17110 17eb0dc43f768440d6af463b5f87aede 108 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 25 103 6.3E-34 T 23-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 RR42_RS05485 25f0ff5aa8a3ac8ddfbd5f9bb5c8116b 734 SUPERFAMILY SSF54211 2 146 1.92E-52 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RR42_RS05485 25f0ff5aa8a3ac8ddfbd5f9bb5c8116b 734 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 5 695 30.016 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RR42_RS05485 25f0ff5aa8a3ac8ddfbd5f9bb5c8116b 734 SUPERFAMILY SSF46915 241 323 2.3E-14 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RR42_RS05485 25f0ff5aa8a3ac8ddfbd5f9bb5c8116b 734 Pfam PF03725 3' exoribonuclease family, domain 2 149 211 2.1E-11 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RR42_RS05485 25f0ff5aa8a3ac8ddfbd5f9bb5c8116b 734 Pfam PF03725 3' exoribonuclease family, domain 2 463 531 2.3E-4 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RR42_RS05485 25f0ff5aa8a3ac8ddfbd5f9bb5c8116b 734 SUPERFAMILY SSF55666 452 551 3.37E-28 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RR42_RS05485 25f0ff5aa8a3ac8ddfbd5f9bb5c8116b 734 SMART SM00316 622 692 6.5E-23 T 23-04-2016 IPR022967 RNA-binding domain, S1 RR42_RS05485 25f0ff5aa8a3ac8ddfbd5f9bb5c8116b 734 SUPERFAMILY SSF54791 556 642 6.45E-22 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 RR42_RS05485 25f0ff5aa8a3ac8ddfbd5f9bb5c8116b 734 Gene3D G3DSA:1.10.10.400 229 316 4.4E-19 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RR42_RS05485 25f0ff5aa8a3ac8ddfbd5f9bb5c8116b 734 Pfam PF00013 KH domain 559 615 2.0E-10 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 RR42_RS05485 25f0ff5aa8a3ac8ddfbd5f9bb5c8116b 734 PANTHER PTHR11252 3 712 0.0 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RR42_RS05485 25f0ff5aa8a3ac8ddfbd5f9bb5c8116b 734 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 244 322 1.3E-16 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RR42_RS05485 25f0ff5aa8a3ac8ddfbd5f9bb5c8116b 734 Gene3D G3DSA:3.30.230.70 3 226 1.4E-83 T 23-04-2016 IPR027408 PNPase/RNase PH domain RR42_RS05485 25f0ff5aa8a3ac8ddfbd5f9bb5c8116b 734 Gene3D G3DSA:3.30.230.70 317 544 1.2E-89 T 23-04-2016 IPR027408 PNPase/RNase PH domain RR42_RS05485 25f0ff5aa8a3ac8ddfbd5f9bb5c8116b 734 SUPERFAMILY SSF55666 147 236 1.22E-27 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RR42_RS05485 25f0ff5aa8a3ac8ddfbd5f9bb5c8116b 734 Gene3D G3DSA:2.40.50.140 621 695 1.3E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS05485 25f0ff5aa8a3ac8ddfbd5f9bb5c8116b 734 SUPERFAMILY SSF50249 622 698 6.86E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS05485 25f0ff5aa8a3ac8ddfbd5f9bb5c8116b 734 PANTHER PTHR11252:SF0 3 712 0.0 T 23-04-2016 RR42_RS05485 25f0ff5aa8a3ac8ddfbd5f9bb5c8116b 734 Pfam PF01138 3' exoribonuclease family, domain 1 17 146 3.2E-20 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 RR42_RS05485 25f0ff5aa8a3ac8ddfbd5f9bb5c8116b 734 Pfam PF01138 3' exoribonuclease family, domain 1 326 458 3.7E-23 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 RR42_RS05485 25f0ff5aa8a3ac8ddfbd5f9bb5c8116b 734 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 693 0.0 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RR42_RS05485 25f0ff5aa8a3ac8ddfbd5f9bb5c8116b 734 Pfam PF00575 S1 RNA binding domain 621 692 8.0E-14 T 23-04-2016 IPR003029 S1 domain GO:0003676 RR42_RS05485 25f0ff5aa8a3ac8ddfbd5f9bb5c8116b 734 Gene3D G3DSA:3.30.1370.10 553 620 3.6E-26 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 RR42_RS05485 25f0ff5aa8a3ac8ddfbd5f9bb5c8116b 734 SUPERFAMILY SSF54211 297 490 3.85E-49 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RR42_RS05485 25f0ff5aa8a3ac8ddfbd5f9bb5c8116b 734 SMART SM00322 554 619 5.5E-14 T 23-04-2016 IPR004087 K Homology domain GO:0003676 RR42_RS05485 25f0ff5aa8a3ac8ddfbd5f9bb5c8116b 734 PIRSF PIRSF005499 3 717 3.3E-295 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RR42_RS14650 1e3527fa45414ebb886776aa57246fcc 610 PANTHER PTHR24221:SF203 7 610 0.0 T 23-04-2016 RR42_RS14650 1e3527fa45414ebb886776aa57246fcc 610 Gene3D G3DSA:3.40.50.300 362 597 2.8E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14650 1e3527fa45414ebb886776aa57246fcc 610 Pfam PF00664 ABC transporter transmembrane region 85 304 1.7E-12 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RR42_RS14650 1e3527fa45414ebb886776aa57246fcc 610 ProSitePatterns PS00211 ABC transporters family signature. 504 518 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS14650 1e3527fa45414ebb886776aa57246fcc 610 SMART SM00382 387 578 2.7E-22 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS14650 1e3527fa45414ebb886776aa57246fcc 610 PANTHER PTHR24221 7 610 0.0 T 23-04-2016 RR42_RS14650 1e3527fa45414ebb886776aa57246fcc 610 Pfam PF00005 ABC transporter 379 532 2.1E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS14650 1e3527fa45414ebb886776aa57246fcc 610 SUPERFAMILY SSF90123 27 343 6.67E-47 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RR42_RS14650 1e3527fa45414ebb886776aa57246fcc 610 SUPERFAMILY SSF52540 351 602 2.11E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14650 1e3527fa45414ebb886776aa57246fcc 610 Gene3D G3DSA:1.20.1560.10 28 334 4.0E-33 T 23-04-2016 RR42_RS14260 7d1c9fbbee1d6b5b70479b3f539b8828 244 SUPERFAMILY SSF46894 143 238 1.93E-25 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS14260 7d1c9fbbee1d6b5b70479b3f539b8828 244 PANTHER PTHR26402 8 239 6.7E-80 T 23-04-2016 RR42_RS14260 7d1c9fbbee1d6b5b70479b3f539b8828 244 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 237 2.1E-21 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS14260 7d1c9fbbee1d6b5b70479b3f539b8828 244 SUPERFAMILY SSF52172 4 128 1.41E-36 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS14260 7d1c9fbbee1d6b5b70479b3f539b8828 244 Gene3D G3DSA:3.40.50.2300 4 129 3.3E-37 T 23-04-2016 RR42_RS14260 7d1c9fbbee1d6b5b70479b3f539b8828 244 SMART SM00862 161 237 4.2E-21 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS14260 7d1c9fbbee1d6b5b70479b3f539b8828 244 Pfam PF00072 Response regulator receiver domain 10 118 3.3E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS14260 7d1c9fbbee1d6b5b70479b3f539b8828 244 SMART SM00448 8 118 2.2E-35 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS14260 7d1c9fbbee1d6b5b70479b3f539b8828 244 PANTHER PTHR26402:SF548 8 239 6.7E-80 T 23-04-2016 RR42_RS14260 7d1c9fbbee1d6b5b70479b3f539b8828 244 Gene3D G3DSA:1.10.10.10 139 240 1.1E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS15650 809e567cf25aec0acf4a5b278f05b834 380 Gene3D G3DSA:1.20.1600.10 122 200 1.4E-4 T 23-04-2016 RR42_RS15650 809e567cf25aec0acf4a5b278f05b834 380 Gene3D G3DSA:2.40.50.100 201 223 2.8E-17 T 23-04-2016 RR42_RS15650 809e567cf25aec0acf4a5b278f05b834 380 Gene3D G3DSA:2.40.50.100 82 116 2.8E-17 T 23-04-2016 RR42_RS15650 809e567cf25aec0acf4a5b278f05b834 380 PANTHER PTHR30469 1 380 1.3E-67 T 23-04-2016 RR42_RS15650 809e567cf25aec0acf4a5b278f05b834 380 SUPERFAMILY SSF111369 73 300 6.54E-33 T 23-04-2016 RR42_RS15650 809e567cf25aec0acf4a5b278f05b834 380 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 83 295 5.6E-27 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RR42_RS15650 809e567cf25aec0acf4a5b278f05b834 380 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 61 377 4.2E-76 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RR42_RS02525 ac1dcfe9eb0e19b14c6629690a74a74c 258 Gene3D G3DSA:3.90.226.10 2 254 4.6E-77 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS02525 ac1dcfe9eb0e19b14c6629690a74a74c 258 PANTHER PTHR11941:SF17 3 254 6.6E-88 T 23-04-2016 RR42_RS02525 ac1dcfe9eb0e19b14c6629690a74a74c 258 SUPERFAMILY SSF52096 3 256 1.07E-74 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS02525 ac1dcfe9eb0e19b14c6629690a74a74c 258 PANTHER PTHR11941 3 254 6.6E-88 T 23-04-2016 RR42_RS02525 ac1dcfe9eb0e19b14c6629690a74a74c 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 256 5.5E-56 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RR42_RS11190 4e4aed71229b70d5e1624e5f95f0b409 552 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 186 198 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RR42_RS11190 4e4aed71229b70d5e1624e5f95f0b409 552 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 184 282 4.8E-16 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RR42_RS11190 4e4aed71229b70d5e1624e5f95f0b409 552 PANTHER PTHR10909 34 466 2.5E-162 T 23-04-2016 RR42_RS11190 4e4aed71229b70d5e1624e5f95f0b409 552 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 292 446 5.3E-36 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS11190 4e4aed71229b70d5e1624e5f95f0b409 552 SUPERFAMILY SSF56645 80 299 3.14E-33 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RR42_RS11190 4e4aed71229b70d5e1624e5f95f0b409 552 PANTHER PTHR10909:SF289 34 466 2.5E-162 T 23-04-2016 RR42_RS11190 4e4aed71229b70d5e1624e5f95f0b409 552 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 405 424 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RR42_RS11190 4e4aed71229b70d5e1624e5f95f0b409 552 Gene3D G3DSA:2.40.110.10 184 282 6.9E-21 T 23-04-2016 RR42_RS11190 4e4aed71229b70d5e1624e5f95f0b409 552 Gene3D G3DSA:1.20.140.10 283 452 1.3E-43 T 23-04-2016 RR42_RS11190 4e4aed71229b70d5e1624e5f95f0b409 552 SUPERFAMILY SSF47203 297 452 1.27E-42 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS15190 6490f86cd199015c352f2398d3a6d4c8 325 SUPERFAMILY SSF53850 113 289 2.01E-12 T 23-04-2016 RR42_RS15190 6490f86cd199015c352f2398d3a6d4c8 325 PANTHER PTHR30349 7 287 4.1E-101 T 23-04-2016 RR42_RS15190 6490f86cd199015c352f2398d3a6d4c8 325 PIRSF PIRSF017082 1 324 1.5E-82 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS15190 6490f86cd199015c352f2398d3a6d4c8 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 321 4.6E-94 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS15190 6490f86cd199015c352f2398d3a6d4c8 325 PANTHER PTHR30349:SF16 7 287 4.1E-101 T 23-04-2016 RR42_RS05475 b554ca203f9009e28a3c267af33a9d4d 414 SUPERFAMILY SSF53822 22 380 4.71E-72 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RR42_RS05475 b554ca203f9009e28a3c267af33a9d4d 414 Gene3D G3DSA:3.40.50.2300 307 366 1.9E-33 T 23-04-2016 RR42_RS05475 b554ca203f9009e28a3c267af33a9d4d 414 Gene3D G3DSA:3.40.50.2300 20 156 1.9E-33 T 23-04-2016 RR42_RS05475 b554ca203f9009e28a3c267af33a9d4d 414 Pfam PF13458 Periplasmic binding protein 23 375 1.9E-72 T 23-04-2016 IPR028081 Leucine-binding protein domain RR42_RS05475 b554ca203f9009e28a3c267af33a9d4d 414 PANTHER PTHR30483 7 375 6.5E-47 T 23-04-2016 RR42_RS05475 b554ca203f9009e28a3c267af33a9d4d 414 Gene3D G3DSA:3.40.50.2300 157 306 1.4E-24 T 23-04-2016 RR42_RS01280 3b3c56c7d38baa25930835fdfb047c0a 559 SUPERFAMILY SSF51905 1 301 9.62E-85 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS01280 3b3c56c7d38baa25930835fdfb047c0a 559 SUPERFAMILY SSF51905 488 545 9.62E-85 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS01280 3b3c56c7d38baa25930835fdfb047c0a 559 PIRSF PIRSF000137 1 549 1.3E-149 T 23-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 RR42_RS01280 3b3c56c7d38baa25930835fdfb047c0a 559 Pfam PF05199 GMC oxidoreductase 400 539 1.1E-40 T 23-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 RR42_RS01280 3b3c56c7d38baa25930835fdfb047c0a 559 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 83 106 - T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 RR42_RS01280 3b3c56c7d38baa25930835fdfb047c0a 559 SUPERFAMILY SSF54373 303 489 6.38E-54 T 23-04-2016 RR42_RS01280 3b3c56c7d38baa25930835fdfb047c0a 559 PANTHER PTHR11552 1 544 1.1E-202 T 23-04-2016 RR42_RS01280 3b3c56c7d38baa25930835fdfb047c0a 559 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 267 281 - T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 RR42_RS01280 3b3c56c7d38baa25930835fdfb047c0a 559 Gene3D G3DSA:3.50.50.60 192 326 1.1E-114 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS01280 3b3c56c7d38baa25930835fdfb047c0a 559 Gene3D G3DSA:3.50.50.60 482 544 1.1E-114 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS01280 3b3c56c7d38baa25930835fdfb047c0a 559 Gene3D G3DSA:3.50.50.60 2 127 1.1E-114 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS01280 3b3c56c7d38baa25930835fdfb047c0a 559 Pfam PF00732 GMC oxidoreductase 5 308 3.4E-83 T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 RR42_RS12090 5ac2256813f8922922629b72132cb7a0 395 PIRSF PIRSF016578 2 391 2.1E-28 T 23-04-2016 RR42_RS12090 5ac2256813f8922922629b72132cb7a0 395 Gene3D G3DSA:2.40.110.10 129 207 1.4E-15 T 23-04-2016 RR42_RS12090 5ac2256813f8922922629b72132cb7a0 395 PANTHER PTHR10909:SF275 30 370 4.3E-57 T 23-04-2016 RR42_RS12090 5ac2256813f8922922629b72132cb7a0 395 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 239 369 3.4E-15 T 23-04-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain RR42_RS12090 5ac2256813f8922922629b72132cb7a0 395 Gene3D G3DSA:1.10.540.10 6 110 1.8E-25 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS12090 5ac2256813f8922922629b72132cb7a0 395 SUPERFAMILY SSF56645 19 217 3.66E-39 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RR42_RS12090 5ac2256813f8922922629b72132cb7a0 395 PANTHER PTHR10909 30 370 4.3E-57 T 23-04-2016 RR42_RS12090 5ac2256813f8922922629b72132cb7a0 395 SUPERFAMILY SSF47203 237 384 8.54E-19 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS12090 5ac2256813f8922922629b72132cb7a0 395 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 24 115 1.3E-13 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS12090 5ac2256813f8922922629b72132cb7a0 395 Gene3D G3DSA:1.20.140.10 208 390 2.3E-49 T 23-04-2016 RR42_RS08950 210cd0ecbf76385f8eaa982354265f96 250 SUPERFAMILY SSF53056 44 249 9.16E-52 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RR42_RS08950 210cd0ecbf76385f8eaa982354265f96 250 Gene3D G3DSA:3.40.1050.10 41 249 1.1E-50 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RR42_RS08950 210cd0ecbf76385f8eaa982354265f96 250 PANTHER PTHR11002 14 248 1.5E-130 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RR42_RS08950 210cd0ecbf76385f8eaa982354265f96 250 PANTHER PTHR11002:SF22 14 248 1.5E-130 T 23-04-2016 RR42_RS08950 210cd0ecbf76385f8eaa982354265f96 250 SMART SM00947 90 250 7.9E-43 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RR42_RS08950 210cd0ecbf76385f8eaa982354265f96 250 Pfam PF00484 Carbonic anhydrase 97 246 3.3E-34 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RR42_RS13535 124a8f6c262ffb6b9456d85d199534ad 557 Gene3D G3DSA:2.30.38.10 368 438 4.4E-14 T 23-04-2016 RR42_RS13535 124a8f6c262ffb6b9456d85d199534ad 557 ProSitePatterns PS00455 Putative AMP-binding domain signature. 207 218 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS13535 124a8f6c262ffb6b9456d85d199534ad 557 PANTHER PTHR24095 33 547 5.1E-143 T 23-04-2016 RR42_RS13535 124a8f6c262ffb6b9456d85d199534ad 557 Gene3D G3DSA:3.30.300.30 443 546 3.1E-32 T 23-04-2016 RR42_RS13535 124a8f6c262ffb6b9456d85d199534ad 557 SUPERFAMILY SSF56801 21 547 1.03E-134 T 23-04-2016 RR42_RS13535 124a8f6c262ffb6b9456d85d199534ad 557 Pfam PF00501 AMP-binding enzyme 49 448 6.0E-73 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS13535 124a8f6c262ffb6b9456d85d199534ad 557 Pfam PF13193 AMP-binding enzyme C-terminal domain 457 535 5.2E-26 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RR42_RS13535 124a8f6c262ffb6b9456d85d199534ad 557 Gene3D G3DSA:3.40.50.980 38 212 1.7E-33 T 23-04-2016 RR42_RS13535 124a8f6c262ffb6b9456d85d199534ad 557 Gene3D G3DSA:3.40.50.980 213 367 2.8E-32 T 23-04-2016 RR42_RS17010 c144494c6c527588e8fa19d08f0326aa 532 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 346 368 1.5E-6 T 23-04-2016 RR42_RS17010 c144494c6c527588e8fa19d08f0326aa 532 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.5E-6 T 23-04-2016 RR42_RS17010 c144494c6c527588e8fa19d08f0326aa 532 Pfam PF02910 Fumarate reductase flavoprotein C-term 432 512 1.6E-13 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RR42_RS17010 c144494c6c527588e8fa19d08f0326aa 532 SUPERFAMILY SSF46977 416 517 3.53E-30 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RR42_RS17010 c144494c6c527588e8fa19d08f0326aa 532 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 2 511 9.6E-199 T 23-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 RR42_RS17010 c144494c6c527588e8fa19d08f0326aa 532 Pfam PF00890 FAD binding domain 4 383 2.0E-104 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RR42_RS17010 c144494c6c527588e8fa19d08f0326aa 532 Gene3D G3DSA:1.20.58.100 408 513 1.2E-32 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RR42_RS17010 c144494c6c527588e8fa19d08f0326aa 532 PANTHER PTHR11632 2 524 2.6E-250 T 23-04-2016 RR42_RS17010 c144494c6c527588e8fa19d08f0326aa 532 Gene3D G3DSA:3.50.50.60 2 234 1.6E-102 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS17010 c144494c6c527588e8fa19d08f0326aa 532 Gene3D G3DSA:3.50.50.60 340 399 1.6E-102 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS17010 c144494c6c527588e8fa19d08f0326aa 532 SUPERFAMILY SSF56425 229 344 1.64E-42 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RR42_RS17010 c144494c6c527588e8fa19d08f0326aa 532 SUPERFAMILY SSF51905 2 246 1.07E-72 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS17010 c144494c6c527588e8fa19d08f0326aa 532 SUPERFAMILY SSF51905 347 439 1.07E-72 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS17010 c144494c6c527588e8fa19d08f0326aa 532 Gene3D G3DSA:3.90.700.10 235 339 1.0E-38 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RR42_RS17010 c144494c6c527588e8fa19d08f0326aa 532 PANTHER PTHR11632:SF27 2 524 2.6E-250 T 23-04-2016 RR42_RS05995 00994d47ddc626da24c53b9e2697f9e6 700 SMART SM00487 28 443 6.0E-26 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RR42_RS05995 00994d47ddc626da24c53b9e2697f9e6 700 Gene3D G3DSA:3.30.2060.10 178 251 6.1E-12 T 23-04-2016 RR42_RS05995 00994d47ddc626da24c53b9e2697f9e6 700 Pfam PF02151 UvrB/uvrC motif 647 681 3.8E-9 T 23-04-2016 IPR001943 UVR domain GO:0005515 RR42_RS05995 00994d47ddc626da24c53b9e2697f9e6 700 Hamap MF_00204 UvrABC system protein B [uvrB]. 22 681 43.126 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RR42_RS05995 00994d47ddc626da24c53b9e2697f9e6 700 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 24 679 0.0 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RR42_RS05995 00994d47ddc626da24c53b9e2697f9e6 700 SUPERFAMILY SSF46600 635 682 7.72E-12 T 23-04-2016 IPR001943 UVR domain GO:0005515 RR42_RS05995 00994d47ddc626da24c53b9e2697f9e6 700 Gene3D G3DSA:3.40.50.300 437 598 4.0E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05995 00994d47ddc626da24c53b9e2697f9e6 700 Pfam PF00271 Helicase conserved C-terminal domain 452 563 1.5E-19 T 23-04-2016 IPR001650 Helicase, C-terminal RR42_RS05995 00994d47ddc626da24c53b9e2697f9e6 700 SMART SM00490 478 564 8.0E-20 T 23-04-2016 IPR001650 Helicase, C-terminal RR42_RS05995 00994d47ddc626da24c53b9e2697f9e6 700 Gene3D G3DSA:4.10.860.10 641 684 1.6E-17 T 23-04-2016 IPR001943 UVR domain GO:0005515 RR42_RS05995 00994d47ddc626da24c53b9e2697f9e6 700 Pfam PF12344 Ultra-violet resistance protein B 570 612 4.1E-21 T 23-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain RR42_RS05995 00994d47ddc626da24c53b9e2697f9e6 700 SUPERFAMILY SSF52540 23 433 9.64E-136 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05995 00994d47ddc626da24c53b9e2697f9e6 700 PANTHER PTHR24029 18 700 0.0 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RR42_RS05995 00994d47ddc626da24c53b9e2697f9e6 700 SUPERFAMILY SSF52540 56 101 3.97E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05995 00994d47ddc626da24c53b9e2697f9e6 700 SUPERFAMILY SSF52540 477 605 3.97E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05995 00994d47ddc626da24c53b9e2697f9e6 700 Gene3D G3DSA:3.40.50.300 25 108 1.2E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05995 00994d47ddc626da24c53b9e2697f9e6 700 Gene3D G3DSA:3.40.50.300 407 428 1.2E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05995 00994d47ddc626da24c53b9e2697f9e6 700 Gene3D G3DSA:3.40.50.300 297 357 1.2E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05995 00994d47ddc626da24c53b9e2697f9e6 700 Pfam PF04851 Type III restriction enzyme, res subunit 36 155 9.9E-9 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RR42_RS14350 a416c668d579b128513abd14c15f635c 265 PANTHER PTHR10314:SF4 74 163 2.2E-23 T 23-04-2016 RR42_RS14350 a416c668d579b128513abd14c15f635c 265 PANTHER PTHR10314:SF4 1 51 2.2E-23 T 23-04-2016 RR42_RS14350 a416c668d579b128513abd14c15f635c 265 Pfam PF00290 Tryptophan synthase alpha chain 8 257 7.1E-86 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RR42_RS14350 a416c668d579b128513abd14c15f635c 265 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 23-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RR42_RS14350 a416c668d579b128513abd14c15f635c 265 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 262 33.755 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RR42_RS14350 a416c668d579b128513abd14c15f635c 265 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 259 2.6E-75 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RR42_RS14350 a416c668d579b128513abd14c15f635c 265 SUPERFAMILY SSF51366 1 249 1.6E-89 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RR42_RS14350 a416c668d579b128513abd14c15f635c 265 Gene3D G3DSA:3.20.20.70 2 264 6.4E-102 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS14350 a416c668d579b128513abd14c15f635c 265 PANTHER PTHR10314 74 163 2.2E-23 T 23-04-2016 RR42_RS14350 a416c668d579b128513abd14c15f635c 265 PANTHER PTHR10314 1 51 2.2E-23 T 23-04-2016 RR42_RS09135 96262558e556a5e5005d312ef31e63c4 648 Gene3D G3DSA:3.30.1050.10 522 633 1.1E-7 T 23-04-2016 IPR003033 SCP2 sterol-binding domain RR42_RS09135 96262558e556a5e5005d312ef31e63c4 648 Pfam PF00753 Metallo-beta-lactamase superfamily 100 326 3.2E-35 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS09135 96262558e556a5e5005d312ef31e63c4 648 Gene3D G3DSA:3.60.15.10 230 350 4.6E-36 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS09135 96262558e556a5e5005d312ef31e63c4 648 Gene3D G3DSA:3.60.15.10 69 194 4.6E-36 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS09135 96262558e556a5e5005d312ef31e63c4 648 SUPERFAMILY SSF55718 515 641 7.3E-23 T 23-04-2016 IPR003033 SCP2 sterol-binding domain RR42_RS09135 96262558e556a5e5005d312ef31e63c4 648 SMART SM00849 104 326 1.8E-12 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS09135 96262558e556a5e5005d312ef31e63c4 648 SUPERFAMILY SSF56281 7 503 6.72E-138 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS09135 96262558e556a5e5005d312ef31e63c4 648 Pfam PF14864 Alkyl sulfatase C-terminal 514 640 2.0E-26 T 23-04-2016 IPR029229 Alkyl sulfatase, C-terminal RR42_RS09135 96262558e556a5e5005d312ef31e63c4 648 PANTHER PTHR11935:SF93 216 451 2.3E-162 T 23-04-2016 RR42_RS09135 96262558e556a5e5005d312ef31e63c4 648 PANTHER PTHR11935:SF93 55 192 2.3E-162 T 23-04-2016 RR42_RS09135 96262558e556a5e5005d312ef31e63c4 648 PANTHER PTHR11935 216 451 2.3E-162 T 23-04-2016 RR42_RS09135 96262558e556a5e5005d312ef31e63c4 648 PANTHER PTHR11935 55 192 2.3E-162 T 23-04-2016 RR42_RS09135 96262558e556a5e5005d312ef31e63c4 648 Pfam PF14863 Alkyl sulfatase dimerisation 365 501 2.7E-52 T 23-04-2016 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 RR42_RS18920 c36314e870dc69d250c42893c61eedd6 220 PANTHER PTHR21403 5 215 5.4E-84 T 23-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RR42_RS18920 c36314e870dc69d250c42893c61eedd6 220 SUPERFAMILY SSF53850 8 213 6.88E-65 T 23-04-2016 RR42_RS18920 c36314e870dc69d250c42893c61eedd6 220 PANTHER PTHR21403:SF3 5 215 5.4E-84 T 23-04-2016 RR42_RS18920 c36314e870dc69d250c42893c61eedd6 220 Gene3D G3DSA:3.40.190.10 7 151 6.7E-43 T 23-04-2016 RR42_RS18920 c36314e870dc69d250c42893c61eedd6 220 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 8 193 1.6E-58 T 23-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RR42_RS18920 c36314e870dc69d250c42893c61eedd6 220 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 7 217 56.12 T 23-04-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RR42_RS18920 c36314e870dc69d250c42893c61eedd6 220 Pfam PF01634 ATP phosphoribosyltransferase 57 211 9.1E-48 T 23-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RR42_RS18920 c36314e870dc69d250c42893c61eedd6 220 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 152 173 - T 23-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RR42_RS11900 602bd4b90852ea6b57794a410cd2ac36 177 Gene3D G3DSA:3.90.45.10 1 161 3.9E-55 T 23-04-2016 IPR023635 Peptide deformylase RR42_RS11900 602bd4b90852ea6b57794a410cd2ac36 177 PANTHER PTHR10458 1 165 2.6E-72 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RR42_RS11900 602bd4b90852ea6b57794a410cd2ac36 177 PANTHER PTHR10458:SF4 1 165 2.6E-72 T 23-04-2016 RR42_RS11900 602bd4b90852ea6b57794a410cd2ac36 177 SUPERFAMILY SSF56420 1 165 3.93E-58 T 23-04-2016 IPR023635 Peptide deformylase RR42_RS11900 602bd4b90852ea6b57794a410cd2ac36 177 PRINTS PR01576 Peptide deformylase signature 97 108 4.5E-28 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RR42_RS11900 602bd4b90852ea6b57794a410cd2ac36 177 PRINTS PR01576 Peptide deformylase signature 109 127 4.5E-28 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RR42_RS11900 602bd4b90852ea6b57794a410cd2ac36 177 PRINTS PR01576 Peptide deformylase signature 33 62 4.5E-28 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RR42_RS11900 602bd4b90852ea6b57794a410cd2ac36 177 PRINTS PR01576 Peptide deformylase signature 128 157 4.5E-28 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RR42_RS11900 602bd4b90852ea6b57794a410cd2ac36 177 Hamap MF_00163 Peptide deformylase [def]. 1 170 26.919 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RR42_RS11900 602bd4b90852ea6b57794a410cd2ac36 177 PIRSF PIRSF004749 1 167 5.7E-49 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RR42_RS11900 602bd4b90852ea6b57794a410cd2ac36 177 Pfam PF01327 Polypeptide deformylase 3 157 5.1E-47 T 23-04-2016 IPR023635 Peptide deformylase RR42_RS11900 602bd4b90852ea6b57794a410cd2ac36 177 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 157 3.5E-35 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RR42_RS21180 3a4d0ff9b3e587f7ab29b97d2ea03b89 129 PANTHER PTHR11751 63 129 9.6E-13 T 23-04-2016 RR42_RS21180 3a4d0ff9b3e587f7ab29b97d2ea03b89 129 SUPERFAMILY SSF46785 42 107 9.43E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS21180 3a4d0ff9b3e587f7ab29b97d2ea03b89 129 Gene3D G3DSA:1.10.10.10 32 103 1.0E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS21180 3a4d0ff9b3e587f7ab29b97d2ea03b89 129 Pfam PF00392 Bacterial regulatory proteins, gntR family 45 97 3.3E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS17940 e27dd710b47a449ff59407da0befbe53 372 Pfam PF00696 Amino acid kinase family 9 238 4.6E-41 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RR42_RS17940 e27dd710b47a449ff59407da0befbe53 372 SUPERFAMILY SSF88697 280 371 4.6E-23 T 23-04-2016 IPR015947 PUA-like domain RR42_RS17940 e27dd710b47a449ff59407da0befbe53 372 SUPERFAMILY SSF53633 9 259 2.75E-68 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RR42_RS17940 e27dd710b47a449ff59407da0befbe53 372 PIRSF PIRSF000729 4 372 3.4E-130 T 23-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RR42_RS17940 e27dd710b47a449ff59407da0befbe53 372 Gene3D G3DSA:2.30.130.10 278 370 5.2E-28 T 23-04-2016 IPR015947 PUA-like domain RR42_RS17940 e27dd710b47a449ff59407da0befbe53 372 Gene3D G3DSA:3.40.1160.10 4 258 1.1E-57 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RR42_RS17940 e27dd710b47a449ff59407da0befbe53 372 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 262 36.412 T 23-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RR42_RS17940 e27dd710b47a449ff59407da0befbe53 372 PANTHER PTHR11063:SF6 1 372 1.8E-115 T 23-04-2016 RR42_RS17940 e27dd710b47a449ff59407da0befbe53 372 PANTHER PTHR11063 1 372 1.8E-115 T 23-04-2016 RR42_RS17940 e27dd710b47a449ff59407da0befbe53 372 TIGRFAM TIGR01027 proB: glutamate 5-kinase 9 370 4.8E-131 T 23-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RR42_RS17940 e27dd710b47a449ff59407da0befbe53 372 Pfam PF01472 PUA domain 281 355 8.0E-24 T 23-04-2016 IPR002478 PUA domain GO:0003723 RR42_RS17940 e27dd710b47a449ff59407da0befbe53 372 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 8.1E-50 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RR42_RS17940 e27dd710b47a449ff59407da0befbe53 372 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 8.1E-50 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RR42_RS17940 e27dd710b47a449ff59407da0befbe53 372 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 8.1E-50 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RR42_RS17940 e27dd710b47a449ff59407da0befbe53 372 PRINTS PR00474 Glutamate 5-kinase family signature 213 233 8.1E-50 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RR42_RS17940 e27dd710b47a449ff59407da0befbe53 372 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 8.1E-50 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RR42_RS17940 e27dd710b47a449ff59407da0befbe53 372 ProSitePatterns PS00902 Glutamate 5-kinase signature. 211 228 - T 23-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RR42_RS17940 e27dd710b47a449ff59407da0befbe53 372 SMART SM00359 281 364 4.1E-18 T 23-04-2016 IPR002478 PUA domain GO:0003723 RR42_RS02205 a1816a786edd600f4cdbc5ce2794e879 117 PANTHER PTHR41910 3 86 2.4E-12 T 23-04-2016 RR42_RS02205 a1816a786edd600f4cdbc5ce2794e879 117 SUPERFAMILY SSF81343 9 109 1.03E-18 T 23-04-2016 RR42_RS02205 a1816a786edd600f4cdbc5ce2794e879 117 Gene3D G3DSA:1.20.1300.10 8 93 9.3E-19 T 23-04-2016 RR42_RS02205 a1816a786edd600f4cdbc5ce2794e879 117 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 9 101 1.9E-15 T 23-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 RR42_RS02205 a1816a786edd600f4cdbc5ce2794e879 117 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 10 86 3.0E-12 T 23-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 RR42_RS10540 5e05784cf864f56f00e619daba12b089 394 Pfam PF02803 Thiolase, C-terminal domain 272 392 1.3E-39 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RR42_RS10540 5e05784cf864f56f00e619daba12b089 394 Gene3D G3DSA:3.40.47.10 144 195 6.2E-56 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS10540 5e05784cf864f56f00e619daba12b089 394 Gene3D G3DSA:3.40.47.10 278 392 6.2E-56 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS10540 5e05784cf864f56f00e619daba12b089 394 PIRSF PIRSF000429 1 394 2.3E-116 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RR42_RS10540 5e05784cf864f56f00e619daba12b089 394 Pfam PF00108 Thiolase, N-terminal domain 7 263 2.5E-82 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RR42_RS10540 5e05784cf864f56f00e619daba12b089 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 11 392 5.7E-130 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RR42_RS10540 5e05784cf864f56f00e619daba12b089 394 PANTHER PTHR18919 1 394 2.5E-169 T 23-04-2016 RR42_RS10540 5e05784cf864f56f00e619daba12b089 394 PANTHER PTHR18919:SF95 1 394 2.5E-169 T 23-04-2016 RR42_RS10540 5e05784cf864f56f00e619daba12b089 394 Gene3D G3DSA:3.40.47.10 196 276 7.8E-65 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS10540 5e05784cf864f56f00e619daba12b089 394 Gene3D G3DSA:3.40.47.10 6 125 7.8E-65 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS10540 5e05784cf864f56f00e619daba12b089 394 SUPERFAMILY SSF53901 6 271 2.64E-76 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS10540 5e05784cf864f56f00e619daba12b089 394 SUPERFAMILY SSF53901 272 392 1.33E-39 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS10540 5e05784cf864f56f00e619daba12b089 394 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 23-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RR42_RS09185 4f5e9f41e0d7fec6604b82d0e2d247c5 145 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 29 77 2.9E-17 T 23-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RR42_RS09185 4f5e9f41e0d7fec6604b82d0e2d247c5 145 Pfam PF02627 Carboxymuconolactone decarboxylase family 13 94 3.5E-19 T 23-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RR42_RS09185 4f5e9f41e0d7fec6604b82d0e2d247c5 145 PANTHER PTHR34846 11 141 1.5E-15 T 23-04-2016 RR42_RS09185 4f5e9f41e0d7fec6604b82d0e2d247c5 145 PANTHER PTHR34846:SF2 11 141 1.5E-15 T 23-04-2016 RR42_RS09185 4f5e9f41e0d7fec6604b82d0e2d247c5 145 Gene3D G3DSA:1.20.1290.10 2 144 3.9E-56 T 23-04-2016 IPR029032 AhpD-like RR42_RS09185 4f5e9f41e0d7fec6604b82d0e2d247c5 145 SUPERFAMILY SSF69118 5 143 5.55E-49 T 23-04-2016 IPR029032 AhpD-like RR42_RS15110 622b8f8e4163260e5d168666745a1c16 195 ProSitePatterns PS00893 Nudix box signature. 72 93 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RR42_RS15110 622b8f8e4163260e5d168666745a1c16 195 Gene3D G3DSA:3.90.79.10 33 147 3.8E-24 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RR42_RS15110 622b8f8e4163260e5d168666745a1c16 195 Pfam PF14803 Nudix N-terminal 5 36 1.3E-6 T 23-04-2016 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.-+3.6.1.13|KEGG: 00332+3.6.1.-|KEGG: 00740+3.6.1.18|KEGG: 00790+3.6.1.- RR42_RS15110 622b8f8e4163260e5d168666745a1c16 195 Pfam PF00293 NUDIX domain 46 142 3.7E-14 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RR42_RS15110 622b8f8e4163260e5d168666745a1c16 195 Gene3D G3DSA:2.20.70.10 5 32 5.2E-4 T 23-04-2016 RR42_RS15110 622b8f8e4163260e5d168666745a1c16 195 PANTHER PTHR22769 4 143 9.1E-24 T 23-04-2016 RR42_RS15110 622b8f8e4163260e5d168666745a1c16 195 SUPERFAMILY SSF55811 5 161 2.03E-30 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RR42_RS13975 a7e09de0915e30982a035fde25214a83 514 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 319 509 4.0E-59 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RR42_RS13975 a7e09de0915e30982a035fde25214a83 514 Pfam PF00672 HAMP domain 191 257 1.1E-6 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS13975 a7e09de0915e30982a035fde25214a83 514 SMART SM00283 263 510 1.1E-89 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RR42_RS13975 a7e09de0915e30982a035fde25214a83 514 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 182 7.2E-20 T 23-04-2016 IPR024478 4HB MCP domain RR42_RS13975 a7e09de0915e30982a035fde25214a83 514 PANTHER PTHR32089 172 513 2.6E-134 T 23-04-2016 RR42_RS13975 a7e09de0915e30982a035fde25214a83 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 419 1.7E-56 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RR42_RS13975 a7e09de0915e30982a035fde25214a83 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 361 388 1.7E-56 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RR42_RS13975 a7e09de0915e30982a035fde25214a83 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 284 313 1.7E-56 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RR42_RS13975 a7e09de0915e30982a035fde25214a83 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 438 467 1.7E-56 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RR42_RS13975 a7e09de0915e30982a035fde25214a83 514 SUPERFAMILY SSF58104 230 511 6.67E-73 T 23-04-2016 RR42_RS13975 a7e09de0915e30982a035fde25214a83 514 Gene3D G3DSA:1.10.287.950 277 482 1.7E-61 T 23-04-2016 RR42_RS13975 a7e09de0915e30982a035fde25214a83 514 PANTHER PTHR32089:SF63 172 513 2.6E-134 T 23-04-2016 RR42_RS13975 a7e09de0915e30982a035fde25214a83 514 SMART SM00304 209 262 1.4E-4 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS12530 c46322bc7f55b984ac6bbe6ad7d5b544 413 Pfam PF00994 Probable molybdopterin binding domain 186 326 4.6E-26 T 23-04-2016 IPR001453 MoaB/Mog domain RR42_RS12530 c46322bc7f55b984ac6bbe6ad7d5b544 413 SMART SM00852 186 328 2.5E-45 T 23-04-2016 IPR001453 MoaB/Mog domain RR42_RS12530 c46322bc7f55b984ac6bbe6ad7d5b544 413 SUPERFAMILY SSF53218 183 333 2.22E-41 T 23-04-2016 IPR001453 MoaB/Mog domain RR42_RS12530 c46322bc7f55b984ac6bbe6ad7d5b544 413 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 183 324 6.0E-25 T 23-04-2016 IPR001453 MoaB/Mog domain RR42_RS12530 c46322bc7f55b984ac6bbe6ad7d5b544 413 Pfam PF03453 MoeA N-terminal region (domain I and II) 14 173 2.0E-35 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RR42_RS12530 c46322bc7f55b984ac6bbe6ad7d5b544 413 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 259 292 - T 23-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 RR42_RS12530 c46322bc7f55b984ac6bbe6ad7d5b544 413 Pfam PF03454 MoeA C-terminal region (domain IV) 342 406 2.3E-9 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RR42_RS12530 c46322bc7f55b984ac6bbe6ad7d5b544 413 SUPERFAMILY SSF63882 12 181 3.4E-51 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RR42_RS12530 c46322bc7f55b984ac6bbe6ad7d5b544 413 Gene3D G3DSA:3.90.105.10 137 168 4.7E-22 T 23-04-2016 RR42_RS12530 c46322bc7f55b984ac6bbe6ad7d5b544 413 SUPERFAMILY SSF63867 337 410 7.72E-14 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RR42_RS12530 c46322bc7f55b984ac6bbe6ad7d5b544 413 PANTHER PTHR10192 10 412 1.1E-142 T 23-04-2016 RR42_RS12530 c46322bc7f55b984ac6bbe6ad7d5b544 413 Gene3D G3DSA:2.40.340.10 342 408 2.8E-8 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RR42_RS12530 c46322bc7f55b984ac6bbe6ad7d5b544 413 Gene3D G3DSA:2.170.190.11 56 136 4.2E-28 T 23-04-2016 RR42_RS12530 c46322bc7f55b984ac6bbe6ad7d5b544 413 Gene3D G3DSA:3.40.980.10 169 341 8.0E-65 T 23-04-2016 IPR001453 MoaB/Mog domain RR42_RS08910 011970ca3bd67941d2aa4079fa27a30e 483 TIGRFAM TIGR00886 2A0108: nitrite transporter 40 435 1.2E-95 T 23-04-2016 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 RR42_RS08910 011970ca3bd67941d2aa4079fa27a30e 483 Gene3D G3DSA:1.20.1250.20 259 474 1.6E-13 T 23-04-2016 RR42_RS08910 011970ca3bd67941d2aa4079fa27a30e 483 Gene3D G3DSA:1.20.1250.20 39 243 3.7E-12 T 23-04-2016 RR42_RS08910 011970ca3bd67941d2aa4079fa27a30e 483 PANTHER PTHR23515 417 481 4.4E-195 T 23-04-2016 RR42_RS08910 011970ca3bd67941d2aa4079fa27a30e 483 PANTHER PTHR23515 5 393 4.4E-195 T 23-04-2016 RR42_RS08910 011970ca3bd67941d2aa4079fa27a30e 483 SUPERFAMILY SSF103473 23 475 2.49E-36 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS08910 011970ca3bd67941d2aa4079fa27a30e 483 PANTHER PTHR23515:SF6 417 481 4.4E-195 T 23-04-2016 RR42_RS08910 011970ca3bd67941d2aa4079fa27a30e 483 PANTHER PTHR23515:SF6 5 393 4.4E-195 T 23-04-2016 RR42_RS08910 011970ca3bd67941d2aa4079fa27a30e 483 Pfam PF07690 Major Facilitator Superfamily 48 390 8.1E-12 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS04640 1a50636a1830668cb001c2a41d031d4e 226 Pfam PF00293 NUDIX domain 61 193 6.7E-12 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RR42_RS04640 1a50636a1830668cb001c2a41d031d4e 226 PANTHER PTHR12992 2 220 7.3E-48 T 23-04-2016 RR42_RS04640 1a50636a1830668cb001c2a41d031d4e 226 Gene3D G3DSA:3.90.79.10 46 224 1.3E-37 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RR42_RS04640 1a50636a1830668cb001c2a41d031d4e 226 SUPERFAMILY SSF55811 58 217 3.93E-32 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RR42_RS16705 5ae62e563a2fa55c982f71a6cb692559 318 PANTHER PTHR10992:SF860 213 314 1.6E-117 T 23-04-2016 RR42_RS16705 5ae62e563a2fa55c982f71a6cb692559 318 PANTHER PTHR10992:SF860 5 177 1.6E-117 T 23-04-2016 RR42_RS16705 5ae62e563a2fa55c982f71a6cb692559 318 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 66 77 8.2E-14 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 RR42_RS16705 5ae62e563a2fa55c982f71a6cb692559 318 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 40 48 8.2E-14 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 RR42_RS16705 5ae62e563a2fa55c982f71a6cb692559 318 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 109 123 8.2E-14 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 RR42_RS16705 5ae62e563a2fa55c982f71a6cb692559 318 PIRSF PIRSF006431 3 318 1.9E-134 T 23-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 RR42_RS16705 5ae62e563a2fa55c982f71a6cb692559 318 Pfam PF00561 alpha/beta hydrolase fold 41 296 6.9E-25 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS16705 5ae62e563a2fa55c982f71a6cb692559 318 SUPERFAMILY SSF53474 3 300 1.63E-61 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS16705 5ae62e563a2fa55c982f71a6cb692559 318 Gene3D G3DSA:3.40.50.1820 11 299 3.0E-70 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS16705 5ae62e563a2fa55c982f71a6cb692559 318 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 12 314 7.9E-117 T 23-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 RR42_RS16705 5ae62e563a2fa55c982f71a6cb692559 318 PANTHER PTHR10992 213 314 1.6E-117 T 23-04-2016 RR42_RS16705 5ae62e563a2fa55c982f71a6cb692559 318 PANTHER PTHR10992 5 177 1.6E-117 T 23-04-2016 RR42_RS16705 5ae62e563a2fa55c982f71a6cb692559 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 123 136 1.3E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS16705 5ae62e563a2fa55c982f71a6cb692559 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 1.3E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS16705 5ae62e563a2fa55c982f71a6cb692559 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 63 78 1.3E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS13740 8b0409f6d347c8c3ad47a4504212f65f 201 PANTHER PTHR11080 1 194 4.5E-50 T 23-04-2016 RR42_RS13740 8b0409f6d347c8c3ad47a4504212f65f 201 Pfam PF00857 Isochorismatase family 24 194 6.8E-35 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RR42_RS13740 8b0409f6d347c8c3ad47a4504212f65f 201 Gene3D G3DSA:3.40.50.850 12 194 1.6E-46 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RR42_RS13740 8b0409f6d347c8c3ad47a4504212f65f 201 PANTHER PTHR11080:SF17 1 194 4.5E-50 T 23-04-2016 RR42_RS13740 8b0409f6d347c8c3ad47a4504212f65f 201 SUPERFAMILY SSF52499 4 194 5.63E-46 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RR42_RS04445 5e664aa564f6d23f89f66ca5744d0de3 904 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 513 8.1E-154 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS04445 5e664aa564f6d23f89f66ca5744d0de3 904 PANTHER PTHR10169:SF48 457 824 0.0 T 23-04-2016 RR42_RS04445 5e664aa564f6d23f89f66ca5744d0de3 904 PANTHER PTHR10169:SF48 2 417 0.0 T 23-04-2016 RR42_RS04445 5e664aa564f6d23f89f66ca5744d0de3 904 PANTHER PTHR10169 457 824 0.0 T 23-04-2016 RR42_RS04445 5e664aa564f6d23f89f66ca5744d0de3 904 PANTHER PTHR10169 2 417 0.0 T 23-04-2016 RR42_RS04445 5e664aa564f6d23f89f66ca5744d0de3 904 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 10 855 0.0 T 23-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RR42_RS04445 5e664aa564f6d23f89f66ca5744d0de3 904 SUPERFAMILY SSF101904 540 863 1.12E-107 T 23-04-2016 RR42_RS04445 5e664aa564f6d23f89f66ca5744d0de3 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 595 641 7.7E-10 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RR42_RS04445 5e664aa564f6d23f89f66ca5744d0de3 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 758 805 2.1E-13 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RR42_RS04445 5e664aa564f6d23f89f66ca5744d0de3 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 545 592 8.5E-10 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RR42_RS04445 5e664aa564f6d23f89f66ca5744d0de3 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 653 695 4.0E-7 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RR42_RS04445 5e664aa564f6d23f89f66ca5744d0de3 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 700 745 2.5E-13 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RR42_RS04445 5e664aa564f6d23f89f66ca5744d0de3 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 808 851 1.9E-11 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RR42_RS04445 5e664aa564f6d23f89f66ca5744d0de3 904 Gene3D G3DSA:3.30.1360.40 236 333 7.2E-41 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain RR42_RS04445 5e664aa564f6d23f89f66ca5744d0de3 904 SUPERFAMILY SSF56719 30 528 5.36E-180 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RR42_RS04445 5e664aa564f6d23f89f66ca5744d0de3 904 Gene3D G3DSA:1.10.268.10 363 504 2.3E-46 T 23-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS04445 5e664aa564f6d23f89f66ca5744d0de3 904 Gene3D G3DSA:3.90.199.10 34 216 6.5E-86 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 RR42_RS04445 5e664aa564f6d23f89f66ca5744d0de3 904 SMART SM00434 11 506 1.9E-288 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS04445 5e664aa564f6d23f89f66ca5744d0de3 904 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 858 29.51 T 23-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RR42_RS04445 5e664aa564f6d23f89f66ca5744d0de3 904 Gene3D G3DSA:2.120.10.90 538 854 2.1E-134 T 23-04-2016 RR42_RS20795 0e742a2748326fcc71d6085e5ee76f50 150 PIRSF PIRSF029477 1 150 2.9E-56 T 23-04-2016 IPR016920 Uncharacterised conserved protein UCP029477 RR42_RS20795 0e742a2748326fcc71d6085e5ee76f50 150 Pfam PF09537 Domain of unknown function (DUF2383) 8 116 5.0E-30 T 23-04-2016 IPR019052 Domain of unknown function DUF2383 RR42_RS20795 0e742a2748326fcc71d6085e5ee76f50 150 TIGRFAM TIGR02284 TIGR02284: conserved hypothetical protein 9 145 2.3E-50 T 23-04-2016 IPR011971 Conserved hypothetical protein CHP02284 RR42_RS05230 bd57f0f55cd14f216f1ae3d52b994ef3 293 Pfam PF03466 LysR substrate binding domain 89 277 9.5E-27 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS05230 bd57f0f55cd14f216f1ae3d52b994ef3 293 PANTHER PTHR30579:SF0 1 292 3.7E-69 T 23-04-2016 RR42_RS05230 bd57f0f55cd14f216f1ae3d52b994ef3 293 PANTHER PTHR30579 1 292 3.7E-69 T 23-04-2016 RR42_RS05230 bd57f0f55cd14f216f1ae3d52b994ef3 293 SUPERFAMILY SSF53850 89 282 2.64E-25 T 23-04-2016 RR42_RS05230 bd57f0f55cd14f216f1ae3d52b994ef3 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 6.5E-24 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS05230 bd57f0f55cd14f216f1ae3d52b994ef3 293 SUPERFAMILY SSF46785 3 111 5.93E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS05230 bd57f0f55cd14f216f1ae3d52b994ef3 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.8E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS05230 bd57f0f55cd14f216f1ae3d52b994ef3 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.8E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS05230 bd57f0f55cd14f216f1ae3d52b994ef3 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.8E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS05230 bd57f0f55cd14f216f1ae3d52b994ef3 293 Gene3D G3DSA:1.10.10.10 4 85 6.9E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS05230 bd57f0f55cd14f216f1ae3d52b994ef3 293 Gene3D G3DSA:3.40.190.10 89 217 1.8E-17 T 23-04-2016 RR42_RS06620 e2aa9ffde0c9c29a3f5695559176b0c8 343 PANTHER PTHR11538 40 53 4.6E-89 T 23-04-2016 RR42_RS06620 e2aa9ffde0c9c29a3f5695559176b0c8 343 PANTHER PTHR11538 91 342 4.6E-89 T 23-04-2016 RR42_RS06620 e2aa9ffde0c9c29a3f5695559176b0c8 343 SUPERFAMILY SSF46589 15 100 1.31E-19 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 RR42_RS06620 e2aa9ffde0c9c29a3f5695559176b0c8 343 Gene3D G3DSA:3.30.930.10 10 342 6.6E-125 T 23-04-2016 RR42_RS06620 e2aa9ffde0c9c29a3f5695559176b0c8 343 SUPERFAMILY SSF55681 93 342 1.88E-74 T 23-04-2016 RR42_RS06620 e2aa9ffde0c9c29a3f5695559176b0c8 343 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 342 1.8E-97 T 23-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RR42_RS06620 e2aa9ffde0c9c29a3f5695559176b0c8 343 Pfam PF01409 tRNA synthetases class II core domain (F) 93 342 3.9E-94 T 23-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 RR42_RS06620 e2aa9ffde0c9c29a3f5695559176b0c8 343 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 88 1.2E-19 T 23-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RR42_RS06620 e2aa9ffde0c9c29a3f5695559176b0c8 343 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 342 45.873 T 23-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 RR42_RS17045 1a917c94e79bfe692d211a3003afcb88 468 Gene3D G3DSA:3.30.70.1170 195 252 1.9E-15 T 23-04-2016 RR42_RS17045 1a917c94e79bfe692d211a3003afcb88 468 PANTHER PTHR22807:SF33 145 467 5.8E-85 T 23-04-2016 RR42_RS17045 1a917c94e79bfe692d211a3003afcb88 468 SUPERFAMILY SSF53335 160 467 1.1E-70 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS17045 1a917c94e79bfe692d211a3003afcb88 468 Pfam PF01189 16S rRNA methyltransferase RsmB/F 263 464 1.1E-50 T 23-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RR42_RS17045 1a917c94e79bfe692d211a3003afcb88 468 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 342 354 9.2E-29 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RR42_RS17045 1a917c94e79bfe692d211a3003afcb88 468 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 244 258 9.2E-29 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RR42_RS17045 1a917c94e79bfe692d211a3003afcb88 468 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 273 283 9.2E-29 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RR42_RS17045 1a917c94e79bfe692d211a3003afcb88 468 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 392 408 9.2E-29 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RR42_RS17045 1a917c94e79bfe692d211a3003afcb88 468 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 449 466 9.2E-29 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RR42_RS17045 1a917c94e79bfe692d211a3003afcb88 468 PANTHER PTHR22807 145 467 5.8E-85 T 23-04-2016 RR42_RS17045 1a917c94e79bfe692d211a3003afcb88 468 Gene3D G3DSA:3.40.50.150 254 466 2.6E-55 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS09905 3a25636324c3527378f0e46a198e0594 437 SUPERFAMILY SSF56529 131 433 8.9E-87 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RR42_RS09905 3a25636324c3527378f0e46a198e0594 437 PANTHER PTHR11820 301 434 1.0E-147 T 23-04-2016 RR42_RS09905 3a25636324c3527378f0e46a198e0594 437 PANTHER PTHR11820 8 102 1.0E-147 T 23-04-2016 RR42_RS09905 3a25636324c3527378f0e46a198e0594 437 PANTHER PTHR11820 129 281 1.0E-147 T 23-04-2016 RR42_RS09905 3a25636324c3527378f0e46a198e0594 437 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 135 411 3.0E-51 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RR42_RS09905 3a25636324c3527378f0e46a198e0594 437 Gene3D G3DSA:3.90.850.10 132 424 1.2E-94 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RR42_RS09905 3a25636324c3527378f0e46a198e0594 437 Pfam PF09298 Fumarylacetoacetase N-terminal 28 129 1.8E-18 T 23-04-2016 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 RR42_RS09905 3a25636324c3527378f0e46a198e0594 437 Gene3D G3DSA:2.30.30.230 13 131 8.4E-29 T 23-04-2016 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 RR42_RS09905 3a25636324c3527378f0e46a198e0594 437 TIGRFAM TIGR01266 fum_ac_acetase: fumarylacetoacetase 13 433 7.9E-140 T 23-04-2016 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 RR42_RS09905 3a25636324c3527378f0e46a198e0594 437 PANTHER PTHR11820:SF1 301 434 1.0E-147 T 23-04-2016 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 RR42_RS09905 3a25636324c3527378f0e46a198e0594 437 PANTHER PTHR11820:SF1 8 102 1.0E-147 T 23-04-2016 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 RR42_RS09905 3a25636324c3527378f0e46a198e0594 437 PANTHER PTHR11820:SF1 129 281 1.0E-147 T 23-04-2016 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 RR42_RS09905 3a25636324c3527378f0e46a198e0594 437 SUPERFAMILY SSF63433 12 129 4.97E-27 T 23-04-2016 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 RR42_RS14585 9d2bd3a7a21bf8322231ab6ab2cdbbd5 152 PANTHER PTHR11803:SF2 1 152 6.8E-43 T 23-04-2016 RR42_RS14585 9d2bd3a7a21bf8322231ab6ab2cdbbd5 152 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 7 150 4.0E-24 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RR42_RS14585 9d2bd3a7a21bf8322231ab6ab2cdbbd5 152 Gene3D G3DSA:3.30.1330.40 2 151 3.6E-60 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RR42_RS14585 9d2bd3a7a21bf8322231ab6ab2cdbbd5 152 PANTHER PTHR11803 1 152 6.8E-43 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family RR42_RS14585 9d2bd3a7a21bf8322231ab6ab2cdbbd5 152 SUPERFAMILY SSF55298 1 151 4.4E-50 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RR42_RS12465 f18b5de92e83271a5233b3a626777db8 732 Hamap MF_01906 D-(-)-3-hydroxybutyrate oligomer hydrolase. 6 732 34.154 T 23-04-2016 IPR016582 D-(-)-3-hydroxybutyrate oligomer hydrolase, putative GO:0005615|GO:0019605|GO:0047989 KEGG: 00650+3.1.1.22|UniPathway: UPA00863 RR42_RS12465 f18b5de92e83271a5233b3a626777db8 732 Pfam PF10605 3HB-oligomer hydrolase (3HBOH) 39 732 0.0 T 23-04-2016 IPR016582 D-(-)-3-hydroxybutyrate oligomer hydrolase, putative GO:0005615|GO:0019605|GO:0047989 KEGG: 00650+3.1.1.22|UniPathway: UPA00863 RR42_RS12465 f18b5de92e83271a5233b3a626777db8 732 Gene3D G3DSA:3.40.50.1820 318 363 3.2E-5 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS12465 f18b5de92e83271a5233b3a626777db8 732 Gene3D G3DSA:3.40.50.1820 590 651 3.2E-5 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS12465 f18b5de92e83271a5233b3a626777db8 732 PIRSF PIRSF011409 2 732 0.0 T 23-04-2016 IPR016582 D-(-)-3-hydroxybutyrate oligomer hydrolase, putative GO:0005615|GO:0019605|GO:0047989 KEGG: 00650+3.1.1.22|UniPathway: UPA00863 RR42_RS09690 fcc13a1c3e3902249e1164d5de3aefa4 876 SUPERFAMILY SSF141729 78 193 2.09E-33 T 23-04-2016 RR42_RS09690 fcc13a1c3e3902249e1164d5de3aefa4 876 PANTHER PTHR30451 69 858 3.2E-298 T 23-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RR42_RS09690 fcc13a1c3e3902249e1164d5de3aefa4 876 Pfam PF13954 PapC N-terminal domain 56 202 2.5E-46 T 23-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 RR42_RS09690 fcc13a1c3e3902249e1164d5de3aefa4 876 Pfam PF13953 PapC C-terminal domain 778 843 5.1E-22 T 23-04-2016 IPR025949 PapC-like, C-terminal domain RR42_RS09690 fcc13a1c3e3902249e1164d5de3aefa4 876 Pfam PF00577 Outer membrane usher protein 218 769 4.3E-166 T 23-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RR42_RS09690 fcc13a1c3e3902249e1164d5de3aefa4 876 PANTHER PTHR30451:SF1 69 858 3.2E-298 T 23-04-2016 RR42_RS09690 fcc13a1c3e3902249e1164d5de3aefa4 876 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 330 340 - T 23-04-2016 IPR018030 Fimbrial membrane usher, conserved site RR42_RS11555 3ac6aa4a5534cc6f681d82c118b1ab5a 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 1.1E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS11555 3ac6aa4a5534cc6f681d82c118b1ab5a 307 Gene3D G3DSA:1.10.10.10 10 89 3.3E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS11555 3ac6aa4a5534cc6f681d82c118b1ab5a 307 Gene3D G3DSA:3.40.190.10 184 267 5.8E-5 T 23-04-2016 RR42_RS11555 3ac6aa4a5534cc6f681d82c118b1ab5a 307 PANTHER PTHR30537:SF5 1 305 4.6E-101 T 23-04-2016 RR42_RS11555 3ac6aa4a5534cc6f681d82c118b1ab5a 307 Gene3D G3DSA:3.40.190.10 98 183 1.5E-25 T 23-04-2016 RR42_RS11555 3ac6aa4a5534cc6f681d82c118b1ab5a 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 6.8E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS11555 3ac6aa4a5534cc6f681d82c118b1ab5a 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 6.8E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS11555 3ac6aa4a5534cc6f681d82c118b1ab5a 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 6.8E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS11555 3ac6aa4a5534cc6f681d82c118b1ab5a 307 PANTHER PTHR30537 1 305 4.6E-101 T 23-04-2016 RR42_RS11555 3ac6aa4a5534cc6f681d82c118b1ab5a 307 SUPERFAMILY SSF46785 10 117 1.58E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS11555 3ac6aa4a5534cc6f681d82c118b1ab5a 307 Pfam PF03466 LysR substrate binding domain 95 301 6.0E-41 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS11555 3ac6aa4a5534cc6f681d82c118b1ab5a 307 SUPERFAMILY SSF53850 95 304 4.81E-42 T 23-04-2016 RR42_RS20340 ecf69d5ebab060e2d9de876bef862b6c 308 Pfam PF03466 LysR substrate binding domain 97 303 4.9E-38 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS20340 ecf69d5ebab060e2d9de876bef862b6c 308 Gene3D G3DSA:3.40.190.10 98 173 3.2E-5 T 23-04-2016 RR42_RS20340 ecf69d5ebab060e2d9de876bef862b6c 308 Gene3D G3DSA:3.40.190.10 174 271 1.9E-19 T 23-04-2016 RR42_RS20340 ecf69d5ebab060e2d9de876bef862b6c 308 Gene3D G3DSA:1.10.10.10 14 94 8.0E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS20340 ecf69d5ebab060e2d9de876bef862b6c 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 5.5E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS20340 ecf69d5ebab060e2d9de876bef862b6c 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 5.5E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS20340 ecf69d5ebab060e2d9de876bef862b6c 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 5.5E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS20340 ecf69d5ebab060e2d9de876bef862b6c 308 SUPERFAMILY SSF53850 98 303 4.52E-41 T 23-04-2016 RR42_RS20340 ecf69d5ebab060e2d9de876bef862b6c 308 SUPERFAMILY SSF46785 14 119 4.96E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS20340 ecf69d5ebab060e2d9de876bef862b6c 308 PANTHER PTHR30537:SF1 4 302 3.4E-108 T 23-04-2016 RR42_RS20340 ecf69d5ebab060e2d9de876bef862b6c 308 PANTHER PTHR30537 4 302 3.4E-108 T 23-04-2016 RR42_RS20340 ecf69d5ebab060e2d9de876bef862b6c 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 70 1.9E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS18605 2ca08bac3ae99438549fc11bf980d50b 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 289 6.2E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS18605 2ca08bac3ae99438549fc11bf980d50b 295 SUPERFAMILY SSF161098 23 290 3.74E-64 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS18605 2ca08bac3ae99438549fc11bf980d50b 295 PANTHER PTHR32243:SF18 16 295 5.6E-119 T 23-04-2016 RR42_RS18605 2ca08bac3ae99438549fc11bf980d50b 295 PANTHER PTHR32243 16 295 5.6E-119 T 23-04-2016 RR42_RS18605 2ca08bac3ae99438549fc11bf980d50b 295 Gene3D G3DSA:1.10.3720.10 23 281 8.9E-63 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS11580 bc4e4e2cbee5f69c8572f9c92c2cd262 279 PRINTS PR01438 Universal stress protein signature 153 171 7.6E-8 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS11580 bc4e4e2cbee5f69c8572f9c92c2cd262 279 PRINTS PR01438 Universal stress protein signature 257 279 7.6E-8 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS11580 bc4e4e2cbee5f69c8572f9c92c2cd262 279 PRINTS PR01438 Universal stress protein signature 239 251 7.6E-8 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS11580 bc4e4e2cbee5f69c8572f9c92c2cd262 279 Gene3D G3DSA:3.40.50.620 154 278 4.5E-16 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS11580 bc4e4e2cbee5f69c8572f9c92c2cd262 279 SUPERFAMILY SSF52402 154 277 3.35E-18 T 23-04-2016 RR42_RS11580 bc4e4e2cbee5f69c8572f9c92c2cd262 279 SUPERFAMILY SSF52402 1 144 2.93E-15 T 23-04-2016 RR42_RS11580 bc4e4e2cbee5f69c8572f9c92c2cd262 279 Pfam PF00582 Universal stress protein family 155 276 2.1E-10 T 23-04-2016 IPR006016 UspA GO:0006950 RR42_RS11580 bc4e4e2cbee5f69c8572f9c92c2cd262 279 Pfam PF00582 Universal stress protein family 4 143 6.2E-8 T 23-04-2016 IPR006016 UspA GO:0006950 RR42_RS11580 bc4e4e2cbee5f69c8572f9c92c2cd262 279 Gene3D G3DSA:3.40.50.620 1 144 1.8E-11 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS17775 0493f2e93fce64e2279bd3ef6bab65e3 228 SMART SM00702 1 179 2.6E-18 T 23-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 RR42_RS17775 0493f2e93fce64e2279bd3ef6bab65e3 228 SUPERFAMILY SSF51197 3 180 3.57E-7 T 23-04-2016 RR42_RS17775 0493f2e93fce64e2279bd3ef6bab65e3 228 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 85 178 2.1E-15 T 23-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 RR42_RS17775 0493f2e93fce64e2279bd3ef6bab65e3 228 PANTHER PTHR41536:SF1 2 228 4.9E-106 T 23-04-2016 RR42_RS17775 0493f2e93fce64e2279bd3ef6bab65e3 228 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 228 44.294 T 23-04-2016 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 RR42_RS17775 0493f2e93fce64e2279bd3ef6bab65e3 228 PANTHER PTHR41536 2 228 4.9E-106 T 23-04-2016 RR42_RS20710 7227771d8f71fb39609059a9593b8b1e 367 SUPERFAMILY SSF46689 311 361 4.39E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS20710 7227771d8f71fb39609059a9593b8b1e 367 Gene3D G3DSA:1.10.10.60 311 360 4.9E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS20710 7227771d8f71fb39609059a9593b8b1e 367 SMART SM00342 276 358 6.1E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RR42_RS20710 7227771d8f71fb39609059a9593b8b1e 367 PANTHER PTHR11019 150 366 1.9E-26 T 23-04-2016 RR42_RS20710 7227771d8f71fb39609059a9593b8b1e 367 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 45 230 4.7E-42 T 23-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal RR42_RS20710 7227771d8f71fb39609059a9593b8b1e 367 Pfam PF12833 Helix-turn-helix domain 282 360 1.4E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RR42_RS20710 7227771d8f71fb39609059a9593b8b1e 367 PANTHER PTHR11019:SF52 150 366 1.9E-26 T 23-04-2016 RR42_RS00575 5e2af3c2b77fce62196163add1c53cd5 346 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 9 275 5.1E-49 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 RR42_RS00575 5e2af3c2b77fce62196163add1c53cd5 346 PANTHER PTHR34138:SF1 5 345 4.2E-64 T 23-04-2016 RR42_RS00575 5e2af3c2b77fce62196163add1c53cd5 346 PANTHER PTHR34138 5 345 4.2E-64 T 23-04-2016 RR42_RS00575 5e2af3c2b77fce62196163add1c53cd5 346 Pfam PF04085 rod shape-determining protein MreC 129 273 6.9E-37 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 RR42_RS13365 9c17c52ae07bb5c69d77f7141fe9fff1 228 PANTHER PTHR21666 74 195 2.1E-36 T 23-04-2016 RR42_RS13365 9c17c52ae07bb5c69d77f7141fe9fff1 228 Gene3D G3DSA:3.90.1720.10 69 195 9.3E-45 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RR42_RS13365 9c17c52ae07bb5c69d77f7141fe9fff1 228 SUPERFAMILY SSF54001 68 194 1.47E-41 T 23-04-2016 RR42_RS13365 9c17c52ae07bb5c69d77f7141fe9fff1 228 Pfam PF00877 NlpC/P60 family 85 192 6.1E-30 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RR42_RS15370 9073ec22c9d4287b2fb33d62420395d5 154 SUPERFAMILY SSF46785 16 150 1.61E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS15370 9073ec22c9d4287b2fb33d62420395d5 154 Pfam PF12802 MarR family 43 100 3.4E-13 T 23-04-2016 RR42_RS15370 9073ec22c9d4287b2fb33d62420395d5 154 ProSitePatterns PS01117 MarR-type HTH domain signature. 76 110 - T 23-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site RR42_RS15370 9073ec22c9d4287b2fb33d62420395d5 154 Gene3D G3DSA:1.10.10.10 5 149 4.6E-36 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS15370 9073ec22c9d4287b2fb33d62420395d5 154 PANTHER PTHR33164 7 152 2.5E-27 T 23-04-2016 RR42_RS15370 9073ec22c9d4287b2fb33d62420395d5 154 SMART SM00347 37 137 6.1E-16 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS04655 4f95190a395cf0530dd862362016f789 418 Pfam PF00534 Glycosyl transferases group 1 214 368 2.1E-28 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 RR42_RS04655 4f95190a395cf0530dd862362016f789 418 SUPERFAMILY SSF53756 5 377 1.2E-57 T 23-04-2016 RR42_RS04655 4f95190a395cf0530dd862362016f789 418 PANTHER PTHR12526:SF374 71 374 1.2E-36 T 23-04-2016 RR42_RS04655 4f95190a395cf0530dd862362016f789 418 PANTHER PTHR12526:SF374 3 43 1.2E-36 T 23-04-2016 RR42_RS04655 4f95190a395cf0530dd862362016f789 418 PANTHER PTHR12526 71 374 1.2E-36 T 23-04-2016 RR42_RS04655 4f95190a395cf0530dd862362016f789 418 PANTHER PTHR12526 3 43 1.2E-36 T 23-04-2016 RR42_RS04655 4f95190a395cf0530dd862362016f789 418 Gene3D G3DSA:3.40.50.2000 208 364 9.3E-19 T 23-04-2016 RR42_RS18010 a419b6b08941aac26d56ca49d30c1663 146 PRINTS PR00502 NUDIX hydrolase family signature 61 76 6.2E-10 T 23-04-2016 IPR020476 NUDIX hydrolase RR42_RS18010 a419b6b08941aac26d56ca49d30c1663 146 PRINTS PR00502 NUDIX hydrolase family signature 47 61 6.2E-10 T 23-04-2016 IPR020476 NUDIX hydrolase RR42_RS18010 a419b6b08941aac26d56ca49d30c1663 146 PANTHER PTHR22769 15 118 1.2E-24 T 23-04-2016 RR42_RS18010 a419b6b08941aac26d56ca49d30c1663 146 Gene3D G3DSA:3.90.79.10 18 141 6.9E-32 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RR42_RS18010 a419b6b08941aac26d56ca49d30c1663 146 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RR42_RS18010 a419b6b08941aac26d56ca49d30c1663 146 SUPERFAMILY SSF55811 14 121 3.66E-33 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RR42_RS18010 a419b6b08941aac26d56ca49d30c1663 146 PANTHER PTHR22769:SF35 15 118 1.2E-24 T 23-04-2016 RR42_RS18010 a419b6b08941aac26d56ca49d30c1663 146 Pfam PF00293 NUDIX domain 20 120 1.7E-19 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RR42_RS03905 ec7f819ee61d3770e482da1f460cbada 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.5E-11 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS03905 ec7f819ee61d3770e482da1f460cbada 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.5E-11 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS03905 ec7f819ee61d3770e482da1f460cbada 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.5E-11 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS03905 ec7f819ee61d3770e482da1f460cbada 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.7E-25 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS03905 ec7f819ee61d3770e482da1f460cbada 305 SUPERFAMILY SSF46785 1 110 1.09E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS03905 ec7f819ee61d3770e482da1f460cbada 305 SUPERFAMILY SSF53850 87 290 2.17E-36 T 23-04-2016 RR42_RS03905 ec7f819ee61d3770e482da1f460cbada 305 Pfam PF03466 LysR substrate binding domain 87 288 3.1E-39 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS03905 ec7f819ee61d3770e482da1f460cbada 305 PANTHER PTHR30346 1 305 1.8E-89 T 23-04-2016 RR42_RS03905 ec7f819ee61d3770e482da1f460cbada 305 Gene3D G3DSA:3.40.190.10 90 175 3.4E-28 T 23-04-2016 RR42_RS03905 ec7f819ee61d3770e482da1f460cbada 305 Gene3D G3DSA:1.10.10.10 1 82 6.7E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS03905 ec7f819ee61d3770e482da1f460cbada 305 Gene3D G3DSA:3.40.190.10 176 261 1.6E-27 T 23-04-2016 RR42_RS12795 fd34349f8e2a3e3b814be7cbb1df1dff 362 PANTHER PTHR11941:SF53 254 331 5.8E-111 T 23-04-2016 RR42_RS12795 fd34349f8e2a3e3b814be7cbb1df1dff 362 PANTHER PTHR11941:SF53 14 191 5.8E-111 T 23-04-2016 RR42_RS12795 fd34349f8e2a3e3b814be7cbb1df1dff 362 Gene3D G3DSA:3.90.226.10 8 198 9.7E-58 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS12795 fd34349f8e2a3e3b814be7cbb1df1dff 362 Pfam PF16113 Enoyl-CoA hydratase/isomerase 18 348 4.1E-127 T 23-04-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 RR42_RS12795 fd34349f8e2a3e3b814be7cbb1df1dff 362 Gene3D G3DSA:1.10.12.10 275 322 8.6E-7 T 23-04-2016 IPR014748 Crontonase, C-terminal RR42_RS12795 fd34349f8e2a3e3b814be7cbb1df1dff 362 PANTHER PTHR11941 254 331 5.8E-111 T 23-04-2016 RR42_RS12795 fd34349f8e2a3e3b814be7cbb1df1dff 362 PANTHER PTHR11941 14 191 5.8E-111 T 23-04-2016 RR42_RS12795 fd34349f8e2a3e3b814be7cbb1df1dff 362 SUPERFAMILY SSF52096 12 190 1.07E-65 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS12795 fd34349f8e2a3e3b814be7cbb1df1dff 362 SUPERFAMILY SSF52096 258 342 1.07E-65 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS05900 8b9758b6fdc131ac21832d1812847e74 561 PANTHER PTHR10795 429 508 1.1E-54 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related RR42_RS05900 8b9758b6fdc131ac21832d1812847e74 561 PANTHER PTHR10795 27 229 1.1E-54 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related RR42_RS05900 8b9758b6fdc131ac21832d1812847e74 561 PANTHER PTHR10795 258 406 1.1E-54 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related RR42_RS05900 8b9758b6fdc131ac21832d1812847e74 561 PRINTS PR00723 Subtilisin serine protease family (S8) signature 255 268 6.3E-10 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related RR42_RS05900 8b9758b6fdc131ac21832d1812847e74 561 PRINTS PR00723 Subtilisin serine protease family (S8) signature 185 204 6.3E-10 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related RR42_RS05900 8b9758b6fdc131ac21832d1812847e74 561 PRINTS PR00723 Subtilisin serine protease family (S8) signature 442 458 6.3E-10 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related RR42_RS05900 8b9758b6fdc131ac21832d1812847e74 561 Gene3D G3DSA:3.40.50.200 125 510 1.6E-65 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RR42_RS05900 8b9758b6fdc131ac21832d1812847e74 561 SUPERFAMILY SSF52743 252 509 1.96E-60 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RR42_RS05900 8b9758b6fdc131ac21832d1812847e74 561 SUPERFAMILY SSF52743 171 220 1.96E-60 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RR42_RS05900 8b9758b6fdc131ac21832d1812847e74 561 Pfam PF00082 Subtilase family 187 486 6.4E-31 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RR42_RS05900 8b9758b6fdc131ac21832d1812847e74 561 PANTHER PTHR10795:SF419 429 508 1.1E-54 T 23-04-2016 RR42_RS05900 8b9758b6fdc131ac21832d1812847e74 561 PANTHER PTHR10795:SF419 27 229 1.1E-54 T 23-04-2016 RR42_RS05900 8b9758b6fdc131ac21832d1812847e74 561 PANTHER PTHR10795:SF419 258 406 1.1E-54 T 23-04-2016 RR42_RS05900 8b9758b6fdc131ac21832d1812847e74 561 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 443 453 - T 23-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site RR42_RS05900 8b9758b6fdc131ac21832d1812847e74 561 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 259 269 - T 23-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site RR42_RS14910 657270a375f16dbea1bd8a0fe04e907b 313 Gene3D G3DSA:3.10.50.40 151 282 1.0E-30 T 23-04-2016 RR42_RS14910 657270a375f16dbea1bd8a0fe04e907b 313 PANTHER PTHR10657:SF11 129 309 2.8E-25 T 23-04-2016 RR42_RS14910 657270a375f16dbea1bd8a0fe04e907b 313 Pfam PF13616 PPIC-type PPIASE domain 154 257 2.5E-18 T 23-04-2016 RR42_RS14910 657270a375f16dbea1bd8a0fe04e907b 313 SUPERFAMILY SSF54534 153 258 1.24E-23 T 23-04-2016 RR42_RS14910 657270a375f16dbea1bd8a0fe04e907b 313 PANTHER PTHR10657 129 309 2.8E-25 T 23-04-2016 RR42_RS03720 fed8270af5a3e0e1ae33c653d5bf009e 417 Gene3D G3DSA:3.90.640.10 294 346 3.0E-4 T 23-04-2016 RR42_RS03720 fed8270af5a3e0e1ae33c653d5bf009e 417 SUPERFAMILY SSF53067 6 170 2.62E-30 T 23-04-2016 RR42_RS03720 fed8270af5a3e0e1ae33c653d5bf009e 417 Gene3D G3DSA:3.30.420.40 6 68 2.5E-29 T 23-04-2016 RR42_RS03720 fed8270af5a3e0e1ae33c653d5bf009e 417 Gene3D G3DSA:3.30.420.40 101 180 2.5E-29 T 23-04-2016 RR42_RS03720 fed8270af5a3e0e1ae33c653d5bf009e 417 Gene3D G3DSA:3.30.420.40 181 220 2.7E-15 T 23-04-2016 RR42_RS03720 fed8270af5a3e0e1ae33c653d5bf009e 417 Gene3D G3DSA:3.30.420.40 352 392 2.7E-15 T 23-04-2016 RR42_RS03720 fed8270af5a3e0e1ae33c653d5bf009e 417 PANTHER PTHR19375 286 410 3.6E-97 T 23-04-2016 RR42_RS03720 fed8270af5a3e0e1ae33c653d5bf009e 417 PANTHER PTHR19375 3 236 3.6E-97 T 23-04-2016 RR42_RS03720 fed8270af5a3e0e1ae33c653d5bf009e 417 PRINTS PR00301 70kDa heat shock protein signature 32 44 2.3E-5 T 23-04-2016 IPR013126 Heat shock protein 70 family RR42_RS03720 fed8270af5a3e0e1ae33c653d5bf009e 417 PRINTS PR00301 70kDa heat shock protein signature 186 196 2.3E-5 T 23-04-2016 IPR013126 Heat shock protein 70 family RR42_RS03720 fed8270af5a3e0e1ae33c653d5bf009e 417 PRINTS PR00301 70kDa heat shock protein signature 4 17 2.3E-5 T 23-04-2016 IPR013126 Heat shock protein 70 family RR42_RS03720 fed8270af5a3e0e1ae33c653d5bf009e 417 PRINTS PR00301 70kDa heat shock protein signature 120 140 2.3E-5 T 23-04-2016 IPR013126 Heat shock protein 70 family RR42_RS03720 fed8270af5a3e0e1ae33c653d5bf009e 417 Pfam PF00012 Hsp70 protein 295 390 3.6E-12 T 23-04-2016 IPR013126 Heat shock protein 70 family RR42_RS03720 fed8270af5a3e0e1ae33c653d5bf009e 417 Pfam PF00012 Hsp70 protein 93 226 1.4E-10 T 23-04-2016 IPR013126 Heat shock protein 70 family RR42_RS03720 fed8270af5a3e0e1ae33c653d5bf009e 417 SUPERFAMILY SSF53067 175 243 1.52E-32 T 23-04-2016 RR42_RS03720 fed8270af5a3e0e1ae33c653d5bf009e 417 SUPERFAMILY SSF53067 292 412 1.52E-32 T 23-04-2016 RR42_RS03720 fed8270af5a3e0e1ae33c653d5bf009e 417 PANTHER PTHR19375:SF182 286 410 3.6E-97 T 23-04-2016 RR42_RS03720 fed8270af5a3e0e1ae33c653d5bf009e 417 PANTHER PTHR19375:SF182 3 236 3.6E-97 T 23-04-2016 RR42_RS13710 d8bd3dbf72905a6246cc67af47e1aecc 365 SUPERFAMILY SSF56935 22 365 1.7E-79 T 23-04-2016 RR42_RS13710 d8bd3dbf72905a6246cc67af47e1aecc 365 Gene3D G3DSA:2.40.160.10 22 365 6.9E-88 T 23-04-2016 IPR023614 Porin domain RR42_RS13710 d8bd3dbf72905a6246cc67af47e1aecc 365 Pfam PF13609 Gram-negative porin 7 333 3.7E-52 T 23-04-2016 RR42_RS13710 d8bd3dbf72905a6246cc67af47e1aecc 365 PRINTS PR00184 Neisseria sp. porin signature 305 329 7.9E-5 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RR42_RS13710 d8bd3dbf72905a6246cc67af47e1aecc 365 PRINTS PR00184 Neisseria sp. porin signature 57 82 7.9E-5 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RR42_RS00130 499cb838052e040a298f53ebc65d6a58 768 PANTHER PTHR10799:SF774 369 609 6.9E-90 T 23-04-2016 RR42_RS00130 499cb838052e040a298f53ebc65d6a58 768 Pfam PF00563 EAL domain 514 748 1.3E-70 T 23-04-2016 IPR001633 EAL domain RR42_RS00130 499cb838052e040a298f53ebc65d6a58 768 PANTHER PTHR10799 369 609 6.9E-90 T 23-04-2016 RR42_RS00130 499cb838052e040a298f53ebc65d6a58 768 Pfam PF13188 PAS domain 204 254 7.3E-4 T 23-04-2016 IPR000014 PAS domain RR42_RS00130 499cb838052e040a298f53ebc65d6a58 768 SMART SM00065 45 198 7.9E-7 T 23-04-2016 IPR003018 GAF domain GO:0005515 RR42_RS00130 499cb838052e040a298f53ebc65d6a58 768 SMART SM00052 508 753 2.4E-118 T 23-04-2016 IPR001633 EAL domain RR42_RS00130 499cb838052e040a298f53ebc65d6a58 768 Gene3D G3DSA:3.20.20.450 512 758 8.6E-97 T 23-04-2016 IPR001633 EAL domain RR42_RS00130 499cb838052e040a298f53ebc65d6a58 768 SUPERFAMILY SSF55785 194 320 5.23E-11 T 23-04-2016 IPR000014 PAS domain RR42_RS00130 499cb838052e040a298f53ebc65d6a58 768 SUPERFAMILY SSF55781 29 188 6.11E-24 T 23-04-2016 IPR029016 GAF domain-like RR42_RS00130 499cb838052e040a298f53ebc65d6a58 768 Pfam PF00990 Diguanylate cyclase, GGDEF domain 334 493 3.9E-43 T 23-04-2016 IPR000160 GGDEF domain RR42_RS00130 499cb838052e040a298f53ebc65d6a58 768 SMART SM00267 323 498 1.1E-60 T 23-04-2016 IPR000160 GGDEF domain RR42_RS00130 499cb838052e040a298f53ebc65d6a58 768 SUPERFAMILY SSF55073 339 499 6.28E-46 T 23-04-2016 IPR029787 Nucleotide cyclase RR42_RS00130 499cb838052e040a298f53ebc65d6a58 768 Gene3D G3DSA:3.30.450.20 197 320 1.4E-12 T 23-04-2016 RR42_RS00130 499cb838052e040a298f53ebc65d6a58 768 SMART SM00091 202 266 0.0015 T 23-04-2016 IPR000014 PAS domain RR42_RS00130 499cb838052e040a298f53ebc65d6a58 768 Gene3D G3DSA:3.30.70.270 336 503 2.0E-53 T 23-04-2016 RR42_RS00130 499cb838052e040a298f53ebc65d6a58 768 Pfam PF13185 GAF domain 45 188 8.2E-16 T 23-04-2016 IPR003018 GAF domain GO:0005515 RR42_RS00130 499cb838052e040a298f53ebc65d6a58 768 SUPERFAMILY SSF141868 513 758 1.22E-84 T 23-04-2016 IPR001633 EAL domain RR42_RS00130 499cb838052e040a298f53ebc65d6a58 768 Gene3D G3DSA:3.30.450.40 27 190 1.7E-18 T 23-04-2016 IPR029016 GAF domain-like RR42_RS00130 499cb838052e040a298f53ebc65d6a58 768 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 331 496 2.0E-38 T 23-04-2016 IPR000160 GGDEF domain RR42_RS16450 8a5bdc91e1106fad7b5aea3eb35b4cc8 212 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 2.1E-28 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RR42_RS16450 8a5bdc91e1106fad7b5aea3eb35b4cc8 212 Gene3D G3DSA:1.10.3720.10 12 207 2.2E-48 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS16450 8a5bdc91e1106fad7b5aea3eb35b4cc8 212 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 211 2.1E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS16450 8a5bdc91e1106fad7b5aea3eb35b4cc8 212 SUPERFAMILY SSF161098 13 200 1.96E-43 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS16450 8a5bdc91e1106fad7b5aea3eb35b4cc8 212 PANTHER PTHR30614 1 211 1.2E-82 T 23-04-2016 RR42_RS12130 9cc525ebfa0a4dac9392e9be4876a5b9 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 9.2E-6 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS12130 9cc525ebfa0a4dac9392e9be4876a5b9 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 9.2E-6 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS12130 9cc525ebfa0a4dac9392e9be4876a5b9 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 9.2E-6 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS12130 9cc525ebfa0a4dac9392e9be4876a5b9 216 PANTHER PTHR26402 1 194 7.2E-22 T 23-04-2016 RR42_RS12130 9cc525ebfa0a4dac9392e9be4876a5b9 216 Gene3D G3DSA:1.10.10.10 110 196 6.4E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS12130 9cc525ebfa0a4dac9392e9be4876a5b9 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 194 1.5E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS12130 9cc525ebfa0a4dac9392e9be4876a5b9 216 Gene3D G3DSA:3.40.50.2300 2 109 1.2E-6 T 23-04-2016 RR42_RS12130 9cc525ebfa0a4dac9392e9be4876a5b9 216 SUPERFAMILY SSF52172 2 121 9.34E-9 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS12130 9cc525ebfa0a4dac9392e9be4876a5b9 216 SMART SM00421 137 194 4.2E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS12130 9cc525ebfa0a4dac9392e9be4876a5b9 216 SUPERFAMILY SSF46894 125 198 2.45E-15 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS12130 9cc525ebfa0a4dac9392e9be4876a5b9 216 PANTHER PTHR26402:SF458 1 194 7.2E-22 T 23-04-2016 RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 699 0.0 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 SUPERFAMILY SSF54980 409 486 2.16E-25 T 23-04-2016 IPR009022 Elongation factor G, III-V domain RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 PANTHER PTHR23115 308 699 0.0 T 23-04-2016 RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 2.1E-33 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 PANTHER PTHR23115:SF66 2 184 0.0 T 23-04-2016 RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 PANTHER PTHR23115:SF66 261 289 0.0 T 23-04-2016 RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 Gene3D G3DSA:2.40.30.10 310 409 3.3E-37 T 23-04-2016 RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 Gene3D G3DSA:3.30.70.870 410 485 7.1E-39 T 23-04-2016 RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 SUPERFAMILY SSF54980 609 698 1.63E-29 T 23-04-2016 IPR009022 Elongation factor G, III-V domain RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 Pfam PF03764 Elongation factor G, domain IV 484 604 1.8E-46 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 Gene3D G3DSA:3.30.70.240 605 693 1.4E-31 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 SUPERFAMILY SSF54211 484 605 6.07E-42 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 Gene3D G3DSA:3.40.50.300 6 293 1.8E-104 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 Hamap MF_00054_B Elongation factor G [fusA]. 6 699 110.22 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 Gene3D G3DSA:3.30.230.10 489 604 1.1E-48 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 SUPERFAMILY SSF52540 6 288 1.57E-107 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 SMART SM00889 485 604 7.9E-72 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 2.2E-68 T 23-04-2016 RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 Pfam PF00679 Elongation factor G C-terminus 606 693 3.1E-30 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 PANTHER PTHR23115:SF66 308 699 0.0 T 23-04-2016 RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 SUPERFAMILY SSF50447 271 409 3.06E-35 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 Pfam PF03144 Elongation factor Tu domain 2 329 396 3.4E-17 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 Pfam PF14492 Elongation Factor G, domain II 409 483 5.1E-35 T 23-04-2016 IPR009022 Elongation factor G, III-V domain RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 PANTHER PTHR23115 2 184 0.0 T 23-04-2016 RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 PANTHER PTHR23115 261 289 0.0 T 23-04-2016 RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 SMART SM00838 606 695 5.6E-50 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain RR42_RS14240 6aa46aa3d2e5d0b3d2199c6b8b140c4b 702 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site RR42_RS10845 a2d916f1cc5de4bbd227c19e2be64d58 121 Gene3D G3DSA:2.60.120.10 25 116 6.3E-40 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS10845 a2d916f1cc5de4bbd227c19e2be64d58 121 SUPERFAMILY SSF51182 15 116 1.06E-17 T 23-04-2016 IPR011051 RmlC-like cupin domain RR42_RS10845 a2d916f1cc5de4bbd227c19e2be64d58 121 Pfam PF07883 Cupin domain 56 113 1.7E-9 T 23-04-2016 IPR013096 Cupin 2, conserved barrel RR42_RS16905 288419c689aca1355482ae40922dcf4a 430 SUPERFAMILY SSF51338 381 419 1.11E-25 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS16905 288419c689aca1355482ae40922dcf4a 430 SUPERFAMILY SSF51338 22 80 1.11E-25 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS16905 288419c689aca1355482ae40922dcf4a 430 TIGRFAM TIGR01224 hutI: imidazolonepropionase 41 418 4.9E-146 T 23-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RR42_RS16905 288419c689aca1355482ae40922dcf4a 430 Hamap MF_00372 Imidazolonepropionase [hutI]. 22 419 42.18 T 23-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RR42_RS16905 288419c689aca1355482ae40922dcf4a 430 PANTHER PTHR22642 40 418 4.1E-144 T 23-04-2016 RR42_RS16905 288419c689aca1355482ae40922dcf4a 430 Gene3D G3DSA:3.20.20.140 90 365 3.0E-41 T 23-04-2016 RR42_RS16905 288419c689aca1355482ae40922dcf4a 430 Gene3D G3DSA:2.30.40.10 36 89 7.1E-12 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS16905 288419c689aca1355482ae40922dcf4a 430 PANTHER PTHR22642:SF1 40 418 4.1E-144 T 23-04-2016 RR42_RS16905 288419c689aca1355482ae40922dcf4a 430 Gene3D G3DSA:2.30.40.10 366 401 1.9E-6 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS16905 288419c689aca1355482ae40922dcf4a 430 SUPERFAMILY SSF51556 80 379 6.34E-86 T 23-04-2016 IPR032466 Metal-dependent hydrolase RR42_RS16905 288419c689aca1355482ae40922dcf4a 430 Pfam PF01979 Amidohydrolase family 78 418 7.8E-16 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RR42_RS30985 f49c4a00c2831d02083dcad4380ddc32 110 Pfam PF02618 YceG-like family 4 93 1.5E-11 T 23-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like RR42_RS30985 f49c4a00c2831d02083dcad4380ddc32 110 PANTHER PTHR30518:SF2 1 98 9.1E-12 T 23-04-2016 RR42_RS30985 f49c4a00c2831d02083dcad4380ddc32 110 PANTHER PTHR30518 1 98 9.1E-12 T 23-04-2016 RR42_RS13775 156febb836e4df6d20bf7154408714f3 277 PANTHER PTHR32243 3 277 2.7E-89 T 23-04-2016 RR42_RS13775 156febb836e4df6d20bf7154408714f3 277 SUPERFAMILY SSF161098 12 276 1.96E-62 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS13775 156febb836e4df6d20bf7154408714f3 277 Gene3D G3DSA:1.10.3720.10 1 264 5.4E-57 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS13775 156febb836e4df6d20bf7154408714f3 277 PANTHER PTHR32243:SF18 3 277 2.7E-89 T 23-04-2016 RR42_RS13775 156febb836e4df6d20bf7154408714f3 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 266 3.5E-11 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS19750 5cb6cf0af04a797a8da6f20d8d98abbe 216 SMART SM00849 12 192 3.5E-36 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS19750 5cb6cf0af04a797a8da6f20d8d98abbe 216 PANTHER PTHR11935:SF115 1 216 1.1E-103 T 23-04-2016 RR42_RS19750 5cb6cf0af04a797a8da6f20d8d98abbe 216 SUPERFAMILY SSF56281 1 214 8.53E-54 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS19750 5cb6cf0af04a797a8da6f20d8d98abbe 216 Pfam PF00753 Metallo-beta-lactamase superfamily 9 192 1.9E-30 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS19750 5cb6cf0af04a797a8da6f20d8d98abbe 216 PANTHER PTHR11935 1 216 1.1E-103 T 23-04-2016 RR42_RS19750 5cb6cf0af04a797a8da6f20d8d98abbe 216 Gene3D G3DSA:3.60.15.10 4 209 9.8E-56 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS11075 1524ccc9ca109c66b3bf0792ae6110d5 616 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 161 276 3.8E-13 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RR42_RS11075 1524ccc9ca109c66b3bf0792ae6110d5 616 Gene3D G3DSA:1.10.540.10 35 156 7.2E-8 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS11075 1524ccc9ca109c66b3bf0792ae6110d5 616 PANTHER PTHR10909 1 493 2.1E-201 T 23-04-2016 RR42_RS11075 1524ccc9ca109c66b3bf0792ae6110d5 616 Gene3D G3DSA:2.40.110.10 159 277 2.7E-24 T 23-04-2016 RR42_RS11075 1524ccc9ca109c66b3bf0792ae6110d5 616 SUPERFAMILY SSF56645 35 277 2.09E-42 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RR42_RS11075 1524ccc9ca109c66b3bf0792ae6110d5 616 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 486 612 2.9E-32 T 23-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RR42_RS11075 1524ccc9ca109c66b3bf0792ae6110d5 616 PANTHER PTHR10909:SF269 1 493 2.1E-201 T 23-04-2016 RR42_RS11075 1524ccc9ca109c66b3bf0792ae6110d5 616 Gene3D G3DSA:1.20.140.10 299 472 4.9E-43 T 23-04-2016 RR42_RS11075 1524ccc9ca109c66b3bf0792ae6110d5 616 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 33 1.5E-10 T 23-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria RR42_RS11075 1524ccc9ca109c66b3bf0792ae6110d5 616 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 300 467 1.6E-17 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS11075 1524ccc9ca109c66b3bf0792ae6110d5 616 SUPERFAMILY SSF47203 304 476 1.55E-37 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS05890 329d0612a5a0b519f8edac395ba3d3b1 986 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 58 979 19.05 T 23-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 RR42_RS05890 329d0612a5a0b519f8edac395ba3d3b1 986 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 602 838 3.2E-64 T 23-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 RR42_RS05890 329d0612a5a0b519f8edac395ba3d3b1 986 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 68 304 2.3E-63 T 23-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 RR42_RS05890 329d0612a5a0b519f8edac395ba3d3b1 986 Pfam PF08335 GlnD PII-uridylyltransferase 334 487 2.6E-47 T 23-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RR42_RS05890 329d0612a5a0b519f8edac395ba3d3b1 986 Pfam PF08335 GlnD PII-uridylyltransferase 876 949 3.5E-7 T 23-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RR42_RS05890 329d0612a5a0b519f8edac395ba3d3b1 986 SUPERFAMILY SSF81301 64 323 3.76E-68 T 23-04-2016 RR42_RS05890 329d0612a5a0b519f8edac395ba3d3b1 986 SUPERFAMILY SSF81593 324 487 2.75E-42 T 23-04-2016 RR42_RS05890 329d0612a5a0b519f8edac395ba3d3b1 986 PANTHER PTHR30621 68 965 9.2E-233 T 23-04-2016 RR42_RS05890 329d0612a5a0b519f8edac395ba3d3b1 986 Gene3D G3DSA:3.30.460.10 686 845 1.9E-52 T 23-04-2016 RR42_RS05890 329d0612a5a0b519f8edac395ba3d3b1 986 Gene3D G3DSA:3.30.460.10 144 321 2.0E-55 T 23-04-2016 RR42_RS05890 329d0612a5a0b519f8edac395ba3d3b1 986 SUPERFAMILY SSF81593 849 978 1.57E-29 T 23-04-2016 RR42_RS05890 329d0612a5a0b519f8edac395ba3d3b1 986 SUPERFAMILY SSF81301 574 849 3.6E-75 T 23-04-2016 RR42_RS16015 9e14589f335c52abf7fffca2ec728bdb 210 SUPERFAMILY SSF103088 93 207 1.2E-39 T 23-04-2016 IPR006665 OmpA-like domain RR42_RS16015 9e14589f335c52abf7fffca2ec728bdb 210 ProSitePatterns PS01068 OmpA-like domain. 137 181 - T 23-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 RR42_RS16015 9e14589f335c52abf7fffca2ec728bdb 210 Gene3D G3DSA:3.30.1330.60 93 205 4.5E-42 T 23-04-2016 IPR006665 OmpA-like domain RR42_RS16015 9e14589f335c52abf7fffca2ec728bdb 210 Pfam PF00691 OmpA family 104 199 1.3E-24 T 23-04-2016 IPR006665 OmpA-like domain RR42_RS16015 9e14589f335c52abf7fffca2ec728bdb 210 Pfam PF13441 YMGG-like Gly-zipper 25 67 2.0E-7 T 23-04-2016 IPR027367 YMGG-like Gly-zipper RR42_RS16015 9e14589f335c52abf7fffca2ec728bdb 210 PRINTS PR01021 OMPA domain signature 135 150 2.8E-16 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RR42_RS16015 9e14589f335c52abf7fffca2ec728bdb 210 PRINTS PR01021 OMPA domain signature 150 166 2.8E-16 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RR42_RS16015 9e14589f335c52abf7fffca2ec728bdb 210 PRINTS PR01021 OMPA domain signature 105 127 2.8E-16 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RR42_RS16015 9e14589f335c52abf7fffca2ec728bdb 210 PANTHER PTHR30128 37 209 4.3E-48 T 23-04-2016 RR42_RS17625 5766a78566f2ea6acdde724eab26375d 165 Pfam PF02464 Competence-damaged protein 8 160 1.8E-60 T 23-04-2016 IPR008136 CinA, C-terminal RR42_RS17625 5766a78566f2ea6acdde724eab26375d 165 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 15 157 7.8E-47 T 23-04-2016 IPR008136 CinA, C-terminal RR42_RS17625 5766a78566f2ea6acdde724eab26375d 165 PANTHER PTHR13939 7 165 1.7E-63 T 23-04-2016 RR42_RS17625 5766a78566f2ea6acdde724eab26375d 165 SUPERFAMILY SSF142433 8 161 3.92E-56 T 23-04-2016 IPR008136 CinA, C-terminal RR42_RS17625 5766a78566f2ea6acdde724eab26375d 165 Gene3D G3DSA:3.90.950.20 8 163 5.9E-61 T 23-04-2016 IPR008136 CinA, C-terminal RR42_RS15065 d976821ed2a07b8d995d743d7d4ddc18 327 PANTHER PTHR21064 6 299 4.3E-38 T 23-04-2016 RR42_RS15065 d976821ed2a07b8d995d743d7d4ddc18 327 Pfam PF01636 Phosphotransferase enzyme family 27 267 8.3E-28 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase RR42_RS15065 d976821ed2a07b8d995d743d7d4ddc18 327 Hamap MF_00301 Homoserine kinase [thrB]. 1 327 162.387 T 23-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 RR42_RS15065 d976821ed2a07b8d995d743d7d4ddc18 327 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 316 2.7E-94 T 23-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 RR42_RS15065 d976821ed2a07b8d995d743d7d4ddc18 327 Gene3D G3DSA:3.90.1200.10 113 320 3.2E-61 T 23-04-2016 RR42_RS15065 d976821ed2a07b8d995d743d7d4ddc18 327 Gene3D G3DSA:3.30.200.20 1 107 8.9E-38 T 23-04-2016 RR42_RS15065 d976821ed2a07b8d995d743d7d4ddc18 327 SUPERFAMILY SSF56112 5 320 5.95E-68 T 23-04-2016 IPR011009 Protein kinase-like domain RR42_RS02400 258d8d728d19fe9f1f47903c57156b64 243 PANTHER PTHR10108:SF864 4 243 6.6E-134 T 23-04-2016 RR42_RS02400 258d8d728d19fe9f1f47903c57156b64 243 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 20 242 1.8E-73 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RR42_RS02400 258d8d728d19fe9f1f47903c57156b64 243 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 151 165 - T 23-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RR42_RS02400 258d8d728d19fe9f1f47903c57156b64 243 Gene3D G3DSA:3.40.50.150 19 236 1.1E-48 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS02400 258d8d728d19fe9f1f47903c57156b64 243 PANTHER PTHR10108 4 243 6.6E-134 T 23-04-2016 RR42_RS02400 258d8d728d19fe9f1f47903c57156b64 243 Pfam PF01209 ubiE/COQ5 methyltransferase family 15 242 1.3E-83 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RR42_RS02400 258d8d728d19fe9f1f47903c57156b64 243 SUPERFAMILY SSF53335 10 238 3.94E-42 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS02400 258d8d728d19fe9f1f47903c57156b64 243 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 31 46 - T 23-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RR42_RS02400 258d8d728d19fe9f1f47903c57156b64 243 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 11 242 35.361 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RR42_RS13560 8eb5290296201bcc0205dd41600e0149 630 PANTHER PTHR24095:SF165 10 628 0.0 T 23-04-2016 RR42_RS13560 8eb5290296201bcc0205dd41600e0149 630 TIGRFAM TIGR02316 propion_prpE: propionate--CoA ligase 5 629 0.0 T 23-04-2016 IPR012694 Propionate--CoA ligase GO:0019629|GO:0050218 KEGG: 00640+6.2.1.17|MetaCyc: PWY-3941|MetaCyc: PWY-5104|MetaCyc: PWY-5747|UniPathway: UPA00946 RR42_RS13560 8eb5290296201bcc0205dd41600e0149 630 SUPERFAMILY SSF56801 6 620 3.79E-162 T 23-04-2016 RR42_RS13560 8eb5290296201bcc0205dd41600e0149 630 Pfam PF13193 AMP-binding enzyme C-terminal domain 511 594 8.4E-24 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RR42_RS13560 8eb5290296201bcc0205dd41600e0149 630 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 5 58 1.9E-23 T 23-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 RR42_RS13560 8eb5290296201bcc0205dd41600e0149 630 ProSitePatterns PS00455 Putative AMP-binding domain signature. 238 249 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS13560 8eb5290296201bcc0205dd41600e0149 630 Gene3D G3DSA:3.40.50.980 55 242 1.1E-36 T 23-04-2016 RR42_RS13560 8eb5290296201bcc0205dd41600e0149 630 Pfam PF00501 AMP-binding enzyme 61 502 6.6E-86 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS13560 8eb5290296201bcc0205dd41600e0149 630 PANTHER PTHR24095 10 628 0.0 T 23-04-2016 RR42_RS13560 8eb5290296201bcc0205dd41600e0149 630 Gene3D G3DSA:2.30.38.10 414 496 1.9E-8 T 23-04-2016 RR42_RS13560 8eb5290296201bcc0205dd41600e0149 630 Gene3D G3DSA:3.40.50.980 243 396 1.3E-26 T 23-04-2016 RR42_RS13560 8eb5290296201bcc0205dd41600e0149 630 Gene3D G3DSA:3.30.300.30 497 610 2.7E-26 T 23-04-2016 RR42_RS04760 5a254aa8c082b72f11cf117dd03391cb 296 Pfam PF00892 EamA-like transporter family 159 295 8.2E-17 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS04760 5a254aa8c082b72f11cf117dd03391cb 296 Pfam PF00892 EamA-like transporter family 12 146 1.1E-16 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS04760 5a254aa8c082b72f11cf117dd03391cb 296 PANTHER PTHR12715:SF5 11 294 1.6E-63 T 23-04-2016 RR42_RS04760 5a254aa8c082b72f11cf117dd03391cb 296 SUPERFAMILY SSF103481 46 149 9.02E-15 T 23-04-2016 RR42_RS04760 5a254aa8c082b72f11cf117dd03391cb 296 SUPERFAMILY SSF103481 197 295 3.01E-12 T 23-04-2016 RR42_RS04760 5a254aa8c082b72f11cf117dd03391cb 296 PANTHER PTHR12715 11 294 1.6E-63 T 23-04-2016 RR42_RS15860 ec83f7b213c975d7602c06d3627473af 323 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 17 318 2.5E-93 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RR42_RS15860 ec83f7b213c975d7602c06d3627473af 323 Gene3D G3DSA:3.40.50.1370 163 298 3.6E-51 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RR42_RS15860 ec83f7b213c975d7602c06d3627473af 323 PANTHER PTHR11405:SF16 9 320 9.9E-126 T 23-04-2016 RR42_RS15860 ec83f7b213c975d7602c06d3627473af 323 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 16 321 41.437 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RR42_RS15860 ec83f7b213c975d7602c06d3627473af 323 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 17 163 1.8E-37 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 RR42_RS15860 ec83f7b213c975d7602c06d3627473af 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 150 167 2.0E-28 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RR42_RS15860 ec83f7b213c975d7602c06d3627473af 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 276 281 2.0E-28 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RR42_RS15860 ec83f7b213c975d7602c06d3627473af 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 235 244 2.0E-28 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RR42_RS15860 ec83f7b213c975d7602c06d3627473af 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 55 77 2.0E-28 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RR42_RS15860 ec83f7b213c975d7602c06d3627473af 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 300 314 2.0E-28 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RR42_RS15860 ec83f7b213c975d7602c06d3627473af 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 93 102 2.0E-28 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RR42_RS15860 ec83f7b213c975d7602c06d3627473af 323 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 65 72 - T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RR42_RS15860 ec83f7b213c975d7602c06d3627473af 323 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 284 307 8.9E-19 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RR42_RS15860 ec83f7b213c975d7602c06d3627473af 323 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 272 281 8.9E-19 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RR42_RS15860 ec83f7b213c975d7602c06d3627473af 323 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 151 162 8.9E-19 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RR42_RS15860 ec83f7b213c975d7602c06d3627473af 323 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 65 84 8.9E-19 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RR42_RS15860 ec83f7b213c975d7602c06d3627473af 323 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 171 315 2.0E-25 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 RR42_RS15860 ec83f7b213c975d7602c06d3627473af 323 PANTHER PTHR11405 9 320 9.9E-126 T 23-04-2016 RR42_RS15860 ec83f7b213c975d7602c06d3627473af 323 SUPERFAMILY SSF53671 16 321 9.95E-97 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RR42_RS15860 ec83f7b213c975d7602c06d3627473af 323 Gene3D G3DSA:3.40.50.1370 17 162 2.3E-50 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RR42_RS14190 c3212105945fa26493f3fe4abf6bd88c 332 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 288 5.3E-59 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RR42_RS14190 c3212105945fa26493f3fe4abf6bd88c 332 PANTHER PTHR10996:SF118 1 332 2.5E-114 T 23-04-2016 RR42_RS14190 c3212105945fa26493f3fe4abf6bd88c 332 Gene3D G3DSA:3.40.50.720 3 116 1.1E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS14190 c3212105945fa26493f3fe4abf6bd88c 332 SUPERFAMILY SSF52283 3 136 1.19E-30 T 23-04-2016 RR42_RS14190 c3212105945fa26493f3fe4abf6bd88c 332 SUPERFAMILY SSF51735 102 289 1.17E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS14190 c3212105945fa26493f3fe4abf6bd88c 332 Gene3D G3DSA:3.40.50.720 117 290 1.2E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS14190 c3212105945fa26493f3fe4abf6bd88c 332 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 312 1.1E-21 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RR42_RS14190 c3212105945fa26493f3fe4abf6bd88c 332 PANTHER PTHR10996 1 332 2.5E-114 T 23-04-2016 RR42_RS14190 c3212105945fa26493f3fe4abf6bd88c 332 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 150 177 - T 23-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RR42_RS15875 4d57dd3b4d04279e2d03a457fdc386e5 190 PANTHER PTHR30327 6 190 6.0E-63 T 23-04-2016 RR42_RS15875 4d57dd3b4d04279e2d03a457fdc386e5 190 Gene3D G3DSA:3.40.1740.10 134 180 2.2E-35 T 23-04-2016 RR42_RS15875 4d57dd3b4d04279e2d03a457fdc386e5 190 Gene3D G3DSA:3.40.1740.10 5 47 2.2E-35 T 23-04-2016 RR42_RS15875 4d57dd3b4d04279e2d03a457fdc386e5 190 SUPERFAMILY SSF143456 8 190 1.7E-66 T 23-04-2016 RR42_RS15875 4d57dd3b4d04279e2d03a457fdc386e5 190 Gene3D G3DSA:3.30.70.1300 48 133 1.6E-31 T 23-04-2016 RR42_RS15875 4d57dd3b4d04279e2d03a457fdc386e5 190 Pfam PF02622 Uncharacterized ACR, COG1678 19 177 6.0E-51 T 23-04-2016 IPR003774 Protein of unknown function UPF0301 RR42_RS15875 4d57dd3b4d04279e2d03a457fdc386e5 190 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 8 190 39.042 T 23-04-2016 IPR003774 Protein of unknown function UPF0301 RR42_RS15875 4d57dd3b4d04279e2d03a457fdc386e5 190 PANTHER PTHR30327:SF1 6 190 6.0E-63 T 23-04-2016 RR42_RS15990 e6568dde510bb05b43a75d5c57153add 212 Gene3D G3DSA:1.10.3480.10 20 211 9.4E-50 T 23-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RR42_RS15990 e6568dde510bb05b43a75d5c57153add 212 Pfam PF02613 Nitrate reductase delta subunit 57 179 2.3E-29 T 23-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RR42_RS15990 e6568dde510bb05b43a75d5c57153add 212 SUPERFAMILY SSF89155 20 211 1.07E-50 T 23-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RR42_RS15990 e6568dde510bb05b43a75d5c57153add 212 PANTHER PTHR34227:SF4 2 210 3.1E-56 T 23-04-2016 RR42_RS15990 e6568dde510bb05b43a75d5c57153add 212 PANTHER PTHR34227 2 210 3.1E-56 T 23-04-2016 RR42_RS17075 57ce242d645ef6c5e076a79234207cca 179 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 25 179 17.622 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RR42_RS17075 57ce242d645ef6c5e076a79234207cca 179 PANTHER PTHR33695:SF1 4 174 6.6E-57 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RR42_RS17075 57ce242d645ef6c5e076a79234207cca 179 PANTHER PTHR33695 4 174 6.6E-57 T 23-04-2016 RR42_RS17075 57ce242d645ef6c5e076a79234207cca 179 TIGRFAM TIGR00077 lspA: signal peptidase II 28 176 5.2E-44 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RR42_RS17075 57ce242d645ef6c5e076a79234207cca 179 Pfam PF01252 Signal peptidase (SPase) II 34 172 9.7E-40 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RR42_RS17075 57ce242d645ef6c5e076a79234207cca 179 ProSitePatterns PS00855 Signal peptidases II signature. 121 133 - T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RR42_RS17075 57ce242d645ef6c5e076a79234207cca 179 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 154 170 4.6E-19 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RR42_RS17075 57ce242d645ef6c5e076a79234207cca 179 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 71 79 4.6E-19 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RR42_RS17075 57ce242d645ef6c5e076a79234207cca 179 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 118 133 4.6E-19 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RR42_RS13295 16080bc5beb9f06052d738978dd1d29b 1205 Gene3D G3DSA:3.40.50.300 836 871 5.0E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13295 16080bc5beb9f06052d738978dd1d29b 1205 Gene3D G3DSA:3.40.50.300 490 542 5.0E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13295 16080bc5beb9f06052d738978dd1d29b 1205 Gene3D G3DSA:3.40.50.300 583 654 5.0E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13295 16080bc5beb9f06052d738978dd1d29b 1205 Gene3D G3DSA:3.40.50.300 906 941 5.0E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13295 16080bc5beb9f06052d738978dd1d29b 1205 Gene3D G3DSA:1.10.486.10 655 796 2.0E-12 T 23-04-2016 RR42_RS13295 16080bc5beb9f06052d738978dd1d29b 1205 PANTHER PTHR11070 20 90 7.8E-75 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RR42_RS13295 16080bc5beb9f06052d738978dd1d29b 1205 PANTHER PTHR11070 335 541 7.8E-75 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RR42_RS13295 16080bc5beb9f06052d738978dd1d29b 1205 PANTHER PTHR11070 814 877 7.8E-75 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RR42_RS13295 16080bc5beb9f06052d738978dd1d29b 1205 PANTHER PTHR11070 909 1171 7.8E-75 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RR42_RS13295 16080bc5beb9f06052d738978dd1d29b 1205 PANTHER PTHR11070 121 193 7.8E-75 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RR42_RS13295 16080bc5beb9f06052d738978dd1d29b 1205 PANTHER PTHR11070 578 775 7.8E-75 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RR42_RS13295 16080bc5beb9f06052d738978dd1d29b 1205 Pfam PF00580 UvrD/REP helicase N-terminal domain 20 473 3.3E-46 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RR42_RS13295 16080bc5beb9f06052d738978dd1d29b 1205 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1033 1173 6.2E-5 T 23-04-2016 RR42_RS13295 16080bc5beb9f06052d738978dd1d29b 1205 Pfam PF13361 UvrD-like helicase C-terminal domain 789 932 1.0E-11 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RR42_RS13295 16080bc5beb9f06052d738978dd1d29b 1205 SUPERFAMILY SSF52540 21 81 2.59E-100 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13295 16080bc5beb9f06052d738978dd1d29b 1205 SUPERFAMILY SSF52540 837 866 2.59E-100 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13295 16080bc5beb9f06052d738978dd1d29b 1205 SUPERFAMILY SSF52540 360 542 2.59E-100 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13295 16080bc5beb9f06052d738978dd1d29b 1205 SUPERFAMILY SSF52540 583 807 2.59E-100 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13295 16080bc5beb9f06052d738978dd1d29b 1205 SUPERFAMILY SSF52540 121 201 2.59E-100 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13295 16080bc5beb9f06052d738978dd1d29b 1205 SUPERFAMILY SSF52540 910 936 2.59E-100 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13295 16080bc5beb9f06052d738978dd1d29b 1205 Gene3D G3DSA:3.40.50.300 19 77 5.5E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13295 16080bc5beb9f06052d738978dd1d29b 1205 Gene3D G3DSA:3.40.50.300 129 189 5.5E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13295 16080bc5beb9f06052d738978dd1d29b 1205 Gene3D G3DSA:3.40.50.300 370 474 5.5E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13295 16080bc5beb9f06052d738978dd1d29b 1205 SUPERFAMILY SSF52980 1023 1176 4.99E-6 T 23-04-2016 IPR011335 Restriction endonuclease type II-like RR42_RS06100 465c2298831970d254c5b096bc2ae7e2 416 Pfam PF12704 MacB-like periplasmic core domain 30 244 2.9E-21 T 23-04-2016 IPR025857 MacB-like periplasmic core domain RR42_RS06100 465c2298831970d254c5b096bc2ae7e2 416 Pfam PF02687 FtsX-like permease family 276 409 1.4E-16 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RR42_RS06100 465c2298831970d254c5b096bc2ae7e2 416 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 6 416 7.7E-147 T 23-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 RR42_RS06100 465c2298831970d254c5b096bc2ae7e2 416 PANTHER PTHR30489:SF8 9 416 2.7E-95 T 23-04-2016 RR42_RS06100 465c2298831970d254c5b096bc2ae7e2 416 PANTHER PTHR30489 9 416 2.7E-95 T 23-04-2016 RR42_RS02200 fb0e9e6ac9c039822f38130cc4fdf9ad 331 PIRSF PIRSF017082 4 331 1.0E-81 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS02200 fb0e9e6ac9c039822f38130cc4fdf9ad 331 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 55 328 1.9E-88 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS02200 fb0e9e6ac9c039822f38130cc4fdf9ad 331 PANTHER PTHR30349:SF16 8 328 3.4E-91 T 23-04-2016 RR42_RS02200 fb0e9e6ac9c039822f38130cc4fdf9ad 331 Gene3D G3DSA:3.40.190.10 176 233 7.3E-4 T 23-04-2016 RR42_RS02200 fb0e9e6ac9c039822f38130cc4fdf9ad 331 SUPERFAMILY SSF53850 118 291 7.03E-16 T 23-04-2016 RR42_RS02200 fb0e9e6ac9c039822f38130cc4fdf9ad 331 PANTHER PTHR30349 8 328 3.4E-91 T 23-04-2016 RR42_RS05095 9775efb1d6b487259ac079d91fd3532c 369 SUPERFAMILY SSF89000 297 346 1.14E-18 T 23-04-2016 RR42_RS05095 9775efb1d6b487259ac079d91fd3532c 369 PANTHER PTHR10277:SF3 13 347 3.0E-108 T 23-04-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 RR42_RS05095 9775efb1d6b487259ac079d91fd3532c 369 PANTHER PTHR10277 13 347 3.0E-108 T 23-04-2016 RR42_RS05095 9775efb1d6b487259ac079d91fd3532c 369 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 13 345 2.0E-175 T 23-04-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 RR42_RS05095 9775efb1d6b487259ac079d91fd3532c 369 SUPERFAMILY SSF51569 11 285 7.33E-66 T 23-04-2016 RR42_RS05095 9775efb1d6b487259ac079d91fd3532c 369 Pfam PF00682 HMGL-like 14 271 6.3E-72 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RR42_RS05095 9775efb1d6b487259ac079d91fd3532c 369 Gene3D G3DSA:1.10.8.60 284 347 5.5E-34 T 23-04-2016 RR42_RS05095 9775efb1d6b487259ac079d91fd3532c 369 Gene3D G3DSA:3.20.20.70 11 271 1.2E-54 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS05095 9775efb1d6b487259ac079d91fd3532c 369 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 281 345 9.0E-28 T 23-04-2016 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 RR42_RS05095 9775efb1d6b487259ac079d91fd3532c 369 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 351 216.611 T 23-04-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 RR42_RS05095 9775efb1d6b487259ac079d91fd3532c 369 Pfam PF07836 DmpG-like communication domain 283 343 1.5E-30 T 23-04-2016 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 RR42_RS05570 9de58d63d6139212693c53326aa526d6 488 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 482 2.0E-188 T 23-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 RR42_RS05570 9de58d63d6139212693c53326aa526d6 488 PANTHER PTHR22773:SF40 1 483 5.3E-209 T 23-04-2016 RR42_RS05570 9de58d63d6139212693c53326aa526d6 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 373 399 5.3E-50 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RR42_RS05570 9de58d63d6139212693c53326aa526d6 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 164 188 5.3E-50 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RR42_RS05570 9de58d63d6139212693c53326aa526d6 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 233 257 5.3E-50 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RR42_RS05570 9de58d63d6139212693c53326aa526d6 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 134 153 5.3E-50 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RR42_RS05570 9de58d63d6139212693c53326aa526d6 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 321 340 5.3E-50 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RR42_RS05570 9de58d63d6139212693c53326aa526d6 488 Pfam PF00361 Proton-conducting membrane transporter 130 413 1.1E-80 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 RR42_RS05570 9de58d63d6139212693c53326aa526d6 488 PANTHER PTHR22773 1 483 5.3E-209 T 23-04-2016 RR42_RS05570 9de58d63d6139212693c53326aa526d6 488 Pfam PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus 55 121 4.1E-5 T 23-04-2016 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692 RR42_RS07845 82a096228657219dad852af830462667 1153 Pfam PF00271 Helicase conserved C-terminal domain 812 917 5.6E-17 T 23-04-2016 IPR001650 Helicase, C-terminal RR42_RS07845 82a096228657219dad852af830462667 1153 SUPERFAMILY SSF141259 480 556 2.88E-22 T 23-04-2016 IPR003711 CarD-like/TRCF domain RR42_RS07845 82a096228657219dad852af830462667 1153 SMART SM00487 608 798 8.8E-33 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RR42_RS07845 82a096228657219dad852af830462667 1153 SMART SM00490 834 918 3.9E-15 T 23-04-2016 IPR001650 Helicase, C-terminal RR42_RS07845 82a096228657219dad852af830462667 1153 SUPERFAMILY SSF143517 1002 1152 2.09E-40 T 23-04-2016 RR42_RS07845 82a096228657219dad852af830462667 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 157 1089 0.0 T 23-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 RR42_RS07845 82a096228657219dad852af830462667 1153 SUPERFAMILY SSF52540 16 348 3.72E-95 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07845 82a096228657219dad852af830462667 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 33 1115 27.883 T 23-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 RR42_RS07845 82a096228657219dad852af830462667 1153 Gene3D G3DSA:3.40.50.300 806 964 3.9E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07845 82a096228657219dad852af830462667 1153 SUPERFAMILY SSF52540 361 472 1.35E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07845 82a096228657219dad852af830462667 1153 Gene3D G3DSA:3.30.2060.10 140 212 8.2E-12 T 23-04-2016 RR42_RS07845 82a096228657219dad852af830462667 1153 Pfam PF02559 CarD-like/TRCF domain 488 583 5.8E-26 T 23-04-2016 IPR003711 CarD-like/TRCF domain RR42_RS07845 82a096228657219dad852af830462667 1153 SUPERFAMILY SSF52540 531 791 3.11E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07845 82a096228657219dad852af830462667 1153 SMART SM00982 1016 1116 3.8E-46 T 23-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 RR42_RS07845 82a096228657219dad852af830462667 1153 Gene3D G3DSA:3.40.50.300 596 794 9.5E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07845 82a096228657219dad852af830462667 1153 PANTHER PTHR14025:SF21 387 1145 0.0 T 23-04-2016 RR42_RS07845 82a096228657219dad852af830462667 1153 PANTHER PTHR14025 387 1145 0.0 T 23-04-2016 RR42_RS07845 82a096228657219dad852af830462667 1153 SUPERFAMILY SSF52540 791 998 3.17E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07845 82a096228657219dad852af830462667 1153 Pfam PF00270 DEAD/DEAH box helicase 613 770 2.1E-19 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RR42_RS07845 82a096228657219dad852af830462667 1153 SMART SM01058 487 584 1.8E-47 T 23-04-2016 IPR003711 CarD-like/TRCF domain RR42_RS07845 82a096228657219dad852af830462667 1153 Pfam PF03461 TRCF domain 1018 1110 2.8E-26 T 23-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 RR42_RS15035 ac45c0c6e370c02282e02da027ec34a4 275 Pfam PF02535 ZIP Zinc transporter 93 254 8.6E-29 T 23-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 RR42_RS15035 ac45c0c6e370c02282e02da027ec34a4 275 PANTHER PTHR16950 4 259 1.7E-39 T 23-04-2016 RR42_RS09500 15c2b05991ba67b0601dd00b9a06d63f 340 PANTHER PTHR30146 6 338 3.6E-98 T 23-04-2016 RR42_RS09500 15c2b05991ba67b0601dd00b9a06d63f 340 SUPERFAMILY SSF47413 6 65 1.41E-13 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS09500 15c2b05991ba67b0601dd00b9a06d63f 340 PANTHER PTHR30146:SF27 6 338 3.6E-98 T 23-04-2016 RR42_RS09500 15c2b05991ba67b0601dd00b9a06d63f 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RR42_RS09500 15c2b05991ba67b0601dd00b9a06d63f 340 Gene3D G3DSA:3.40.50.2300 180 317 2.0E-29 T 23-04-2016 RR42_RS09500 15c2b05991ba67b0601dd00b9a06d63f 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 54 3.3E-15 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RR42_RS09500 15c2b05991ba67b0601dd00b9a06d63f 340 Gene3D G3DSA:1.10.260.40 8 59 4.1E-21 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS09500 15c2b05991ba67b0601dd00b9a06d63f 340 Pfam PF13377 Periplasmic binding protein-like domain 175 337 3.7E-27 T 23-04-2016 RR42_RS09500 15c2b05991ba67b0601dd00b9a06d63f 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 8 18 2.9E-5 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RR42_RS09500 15c2b05991ba67b0601dd00b9a06d63f 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 18 28 2.9E-5 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RR42_RS09500 15c2b05991ba67b0601dd00b9a06d63f 340 Gene3D G3DSA:3.40.50.2300 60 179 1.4E-42 T 23-04-2016 RR42_RS09500 15c2b05991ba67b0601dd00b9a06d63f 340 SUPERFAMILY SSF53822 64 330 1.58E-58 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RR42_RS09500 15c2b05991ba67b0601dd00b9a06d63f 340 SMART SM00354 6 77 9.6E-27 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RR42_RS08990 b3fea9de9bb31ec9edcd7049b339e753 387 Gene3D G3DSA:3.30.70.270 91 184 1.2E-24 T 23-04-2016 RR42_RS08990 b3fea9de9bb31ec9edcd7049b339e753 387 Gene3D G3DSA:3.30.1490.100 263 368 2.6E-31 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS08990 b3fea9de9bb31ec9edcd7049b339e753 387 Hamap MF_01113 DNA polymerase IV [dinB]. 5 381 32.568 T 23-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS08990 b3fea9de9bb31ec9edcd7049b339e753 387 Pfam PF00817 impB/mucB/samB family 11 174 1.2E-40 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS08990 b3fea9de9bb31ec9edcd7049b339e753 387 SUPERFAMILY SSF56672 7 261 2.31E-73 T 23-04-2016 RR42_RS08990 b3fea9de9bb31ec9edcd7049b339e753 387 Pfam PF11799 impB/mucB/samB family C-terminal domain 259 366 9.4E-20 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS08990 b3fea9de9bb31ec9edcd7049b339e753 387 Pfam PF11798 IMS family HHH motif 189 218 2.3E-7 T 23-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS08990 b3fea9de9bb31ec9edcd7049b339e753 387 PANTHER PTHR11076 63 371 3.5E-105 T 23-04-2016 RR42_RS08990 b3fea9de9bb31ec9edcd7049b339e753 387 PANTHER PTHR11076 8 41 3.5E-105 T 23-04-2016 RR42_RS08990 b3fea9de9bb31ec9edcd7049b339e753 387 Gene3D G3DSA:1.10.150.20 188 259 1.6E-22 T 23-04-2016 RR42_RS08990 b3fea9de9bb31ec9edcd7049b339e753 387 SUPERFAMILY SSF100879 263 368 1.73E-27 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS17105 091df1b0447a91b7d6e2d3417ef5b0e8 764 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 534 552 1.1E-38 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 RR42_RS17105 091df1b0447a91b7d6e2d3417ef5b0e8 764 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 492 510 1.1E-38 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 RR42_RS17105 091df1b0447a91b7d6e2d3417ef5b0e8 764 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 596 610 1.1E-38 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 RR42_RS17105 091df1b0447a91b7d6e2d3417ef5b0e8 764 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 563 581 1.1E-38 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 RR42_RS17105 091df1b0447a91b7d6e2d3417ef5b0e8 764 Gene3D G3DSA:1.10.1780.10 1 143 5.8E-42 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 RR42_RS17105 091df1b0447a91b7d6e2d3417ef5b0e8 764 PANTHER PTHR11638 1 763 0.0 T 23-04-2016 RR42_RS17105 091df1b0447a91b7d6e2d3417ef5b0e8 764 Gene3D G3DSA:1.10.8.60 666 745 2.8E-27 T 23-04-2016 RR42_RS17105 091df1b0447a91b7d6e2d3417ef5b0e8 764 Gene3D G3DSA:3.40.50.300 170 350 2.2E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17105 091df1b0447a91b7d6e2d3417ef5b0e8 764 SMART SM01086 654 744 7.2E-31 T 23-04-2016 IPR019489 Clp ATPase, C-terminal RR42_RS17105 091df1b0447a91b7d6e2d3417ef5b0e8 764 Gene3D G3DSA:1.10.8.60 352 431 1.2E-29 T 23-04-2016 RR42_RS17105 091df1b0447a91b7d6e2d3417ef5b0e8 764 SMART SM00382 488 637 5.4E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS17105 091df1b0447a91b7d6e2d3417ef5b0e8 764 SMART SM00382 207 352 1.3E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS17105 091df1b0447a91b7d6e2d3417ef5b0e8 764 PANTHER PTHR11638:SF111 1 763 0.0 T 23-04-2016 RR42_RS17105 091df1b0447a91b7d6e2d3417ef5b0e8 764 Gene3D G3DSA:3.40.50.300 443 665 6.7E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17105 091df1b0447a91b7d6e2d3417ef5b0e8 764 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 212 325 8.6E-12 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RR42_RS17105 091df1b0447a91b7d6e2d3417ef5b0e8 764 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 6.8E-15 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 RR42_RS17105 091df1b0447a91b7d6e2d3417ef5b0e8 764 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 735 0.0 T 23-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 RR42_RS17105 091df1b0447a91b7d6e2d3417ef5b0e8 764 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 519 537 - T 23-04-2016 IPR028299 ClpA/B, conserved site 2 RR42_RS17105 091df1b0447a91b7d6e2d3417ef5b0e8 764 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 303 315 - T 23-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 RR42_RS17105 091df1b0447a91b7d6e2d3417ef5b0e8 764 SUPERFAMILY SSF81923 1 143 2.22E-57 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 RR42_RS17105 091df1b0447a91b7d6e2d3417ef5b0e8 764 SUPERFAMILY SSF52540 438 741 8.58E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17105 091df1b0447a91b7d6e2d3417ef5b0e8 764 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 654 734 8.0E-22 T 23-04-2016 IPR019489 Clp ATPase, C-terminal RR42_RS17105 091df1b0447a91b7d6e2d3417ef5b0e8 764 Pfam PF07724 AAA domain (Cdc48 subfamily) 487 648 1.8E-46 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RR42_RS17105 091df1b0447a91b7d6e2d3417ef5b0e8 764 SUPERFAMILY SSF52540 169 422 3.83E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS16645 ce08820f887848071d6b0d86c5a1b4b8 309 SUPERFAMILY SSF51735 6 138 6.48E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS16645 ce08820f887848071d6b0d86c5a1b4b8 309 SUPERFAMILY SSF55347 117 289 5.63E-35 T 23-04-2016 RR42_RS16645 ce08820f887848071d6b0d86c5a1b4b8 309 Gene3D G3DSA:3.30.360.10 126 289 3.3E-38 T 23-04-2016 RR42_RS16645 ce08820f887848071d6b0d86c5a1b4b8 309 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 45 102 2.9E-11 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RR42_RS16645 ce08820f887848071d6b0d86c5a1b4b8 309 Gene3D G3DSA:3.40.50.720 45 125 9.9E-21 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS16645 ce08820f887848071d6b0d86c5a1b4b8 309 PANTHER PTHR32338 1 306 1.9E-103 T 23-04-2016 RR42_RS16645 ce08820f887848071d6b0d86c5a1b4b8 309 SMART SM00859 5 106 8.3E-15 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RR42_RS16645 ce08820f887848071d6b0d86c5a1b4b8 309 PANTHER PTHR32338:SF9 1 306 1.9E-103 T 23-04-2016 RR42_RS16645 ce08820f887848071d6b0d86c5a1b4b8 309 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 308 50.484 T 23-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RR42_RS16645 ce08820f887848071d6b0d86c5a1b4b8 309 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 4 306 5.9E-119 T 23-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RR42_RS02455 821f44b195d811bf60d63cd76acb8fc4 328 PANTHER PTHR11358 7 326 1.6E-188 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RR42_RS02455 821f44b195d811bf60d63cd76acb8fc4 328 SUPERFAMILY SSF52768 24 319 4.68E-100 T 23-04-2016 RR42_RS02455 821f44b195d811bf60d63cd76acb8fc4 328 ProSitePatterns PS01053 Arginase family signature. 248 269 - T 23-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 RR42_RS02455 821f44b195d811bf60d63cd76acb8fc4 328 PANTHER PTHR11358:SF27 7 326 1.6E-188 T 23-04-2016 RR42_RS02455 821f44b195d811bf60d63cd76acb8fc4 328 PIRSF PIRSF036979 24 323 1.4E-99 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RR42_RS02455 821f44b195d811bf60d63cd76acb8fc4 328 TIGRFAM TIGR01230 agmatinase: agmatinase 42 318 8.3E-60 T 23-04-2016 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|UniPathway: UPA00534 RR42_RS02455 821f44b195d811bf60d63cd76acb8fc4 328 Gene3D G3DSA:3.40.800.10 18 320 2.3E-126 T 23-04-2016 IPR023696 Ureohydrolase domain RR42_RS02455 821f44b195d811bf60d63cd76acb8fc4 328 Pfam PF00491 Arginase family 46 317 2.0E-89 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RR42_RS02455 821f44b195d811bf60d63cd76acb8fc4 328 PRINTS PR00116 Arginase signature 245 274 2.9E-13 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RR42_RS02455 821f44b195d811bf60d63cd76acb8fc4 328 PRINTS PR00116 Arginase signature 132 147 2.9E-13 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RR42_RS20465 5c0cc544de51796ce9ac234835763065 337 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 11 321 2.6E-83 T 23-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RR42_RS20465 5c0cc544de51796ce9ac234835763065 337 Gene3D G3DSA:3.10.25.10 226 329 3.7E-29 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RR42_RS20465 5c0cc544de51796ce9ac234835763065 337 PANTHER PTHR11138 1 319 6.0E-104 T 23-04-2016 RR42_RS20465 5c0cc544de51796ce9ac234835763065 337 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 151 174 - T 23-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RR42_RS20465 5c0cc544de51796ce9ac234835763065 337 SUPERFAMILY SSF53328 11 225 1.31E-60 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RR42_RS20465 5c0cc544de51796ce9ac234835763065 337 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 11 325 34.693 T 23-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RR42_RS20465 5c0cc544de51796ce9ac234835763065 337 Pfam PF02911 Formyl transferase, C-terminal domain 223 321 3.9E-22 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RR42_RS20465 5c0cc544de51796ce9ac234835763065 337 Gene3D G3DSA:3.40.50.170 11 224 8.8E-76 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RR42_RS20465 5c0cc544de51796ce9ac234835763065 337 Pfam PF00551 Formyl transferase 12 199 1.3E-43 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RR42_RS20465 5c0cc544de51796ce9ac234835763065 337 SUPERFAMILY SSF50486 224 329 9.42E-28 T 23-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 RR42_RS18110 6f6f6dd4beac73396f0c694b1ff9b83e 107 PANTHER PTHR37479:SF1 1 87 6.2E-12 T 23-04-2016 RR42_RS18110 6f6f6dd4beac73396f0c694b1ff9b83e 107 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 1 82 4.4E-25 T 23-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 RR42_RS18110 6f6f6dd4beac73396f0c694b1ff9b83e 107 Hamap MF_00910 Cell division protein FtsL [ftsL]. 1 84 14.799 T 23-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 RR42_RS18110 6f6f6dd4beac73396f0c694b1ff9b83e 107 Pfam PF04999 Cell division protein FtsL 2 80 2.7E-16 T 23-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 RR42_RS18110 6f6f6dd4beac73396f0c694b1ff9b83e 107 PANTHER PTHR37479 1 87 6.2E-12 T 23-04-2016 RR42_RS11340 f4fcfcedb5fc2d0548b726d7d6b7719b 547 Gene3D G3DSA:3.40.50.980 195 343 5.7E-29 T 23-04-2016 RR42_RS11340 f4fcfcedb5fc2d0548b726d7d6b7719b 547 PANTHER PTHR24096 5 538 6.5E-224 T 23-04-2016 RR42_RS11340 f4fcfcedb5fc2d0548b726d7d6b7719b 547 ProSitePatterns PS00455 Putative AMP-binding domain signature. 186 197 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS11340 f4fcfcedb5fc2d0548b726d7d6b7719b 547 Gene3D G3DSA:3.40.50.980 12 194 1.1E-28 T 23-04-2016 RR42_RS11340 f4fcfcedb5fc2d0548b726d7d6b7719b 547 Gene3D G3DSA:3.30.300.30 441 539 3.7E-22 T 23-04-2016 RR42_RS11340 f4fcfcedb5fc2d0548b726d7d6b7719b 547 SUPERFAMILY SSF56801 6 543 3.79E-121 T 23-04-2016 RR42_RS11340 f4fcfcedb5fc2d0548b726d7d6b7719b 547 Pfam PF13193 AMP-binding enzyme C-terminal domain 456 530 2.0E-14 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RR42_RS11340 f4fcfcedb5fc2d0548b726d7d6b7719b 547 Gene3D G3DSA:2.30.38.10 366 440 3.8E-14 T 23-04-2016 RR42_RS11340 f4fcfcedb5fc2d0548b726d7d6b7719b 547 PANTHER PTHR24096:SF53 5 538 6.5E-224 T 23-04-2016 RR42_RS11340 f4fcfcedb5fc2d0548b726d7d6b7719b 547 Pfam PF00501 AMP-binding enzyme 25 446 1.8E-79 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS08210 c1fa571e34a312bf052eaf09a90894ea 113 SUPERFAMILY SSF54171 51 105 5.1E-14 T 23-04-2016 IPR016177 DNA-binding domain GO:0003677 RR42_RS08210 c1fa571e34a312bf052eaf09a90894ea 113 Pfam PF13392 HNH endonuclease 4 40 2.4E-7 T 23-04-2016 IPR003615 HNH nuclease RR42_RS08210 c1fa571e34a312bf052eaf09a90894ea 113 SMART SM00380 52 113 1.8E-6 T 23-04-2016 IPR001471 AP2/ERF domain GO:0003700|GO:0006355 RR42_RS08210 c1fa571e34a312bf052eaf09a90894ea 113 Gene3D G3DSA:3.30.730.10 53 105 5.3E-10 T 23-04-2016 IPR001471 AP2/ERF domain GO:0003700|GO:0006355 RR42_RS08210 c1fa571e34a312bf052eaf09a90894ea 113 SUPERFAMILY SSF54060 7 45 1.53E-7 T 23-04-2016 RR42_RS10505 904e45c2740ec25e69188aeb5f580332 380 Gene3D G3DSA:1.10.580.10 77 135 5.0E-4 T 23-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 RR42_RS10505 904e45c2740ec25e69188aeb5f580332 380 Gene3D G3DSA:1.10.580.10 180 253 7.2E-22 T 23-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 RR42_RS10505 904e45c2740ec25e69188aeb5f580332 380 PANTHER PTHR11739 197 374 1.8E-39 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS10505 904e45c2740ec25e69188aeb5f580332 380 Pfam PF00285 Citrate synthase, C-terminal domain 77 369 1.2E-49 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS10505 904e45c2740ec25e69188aeb5f580332 380 SUPERFAMILY SSF48256 28 377 1.26E-64 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS10505 904e45c2740ec25e69188aeb5f580332 380 PRINTS PR00143 Citrate synthase signature 198 213 2.6E-14 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS10505 904e45c2740ec25e69188aeb5f580332 380 PRINTS PR00143 Citrate synthase signature 220 248 2.6E-14 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS10505 904e45c2740ec25e69188aeb5f580332 380 PRINTS PR00143 Citrate synthase signature 272 292 2.6E-14 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS10505 904e45c2740ec25e69188aeb5f580332 380 Gene3D G3DSA:1.10.230.10 254 337 6.4E-9 T 23-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain RR42_RS10505 904e45c2740ec25e69188aeb5f580332 380 Pfam PF12728 Helix-turn-helix domain 4 55 1.6E-6 T 23-04-2016 RR42_RS10505 904e45c2740ec25e69188aeb5f580332 380 PANTHER PTHR11739:SF9 197 374 1.8E-39 T 23-04-2016 RR42_RS20605 6f86b66969c181dcce09420ba1e929e8 352 Pfam PF05145 Putative ammonia monooxygenase 34 342 2.3E-86 T 23-04-2016 IPR007820 AbrB family GO:0010468|GO:0016021 RR42_RS20605 6f86b66969c181dcce09420ba1e929e8 352 PANTHER PTHR38457 3 352 1.7E-57 T 23-04-2016 RR42_RS20605 6f86b66969c181dcce09420ba1e929e8 352 PANTHER PTHR38457:SF1 3 352 1.7E-57 T 23-04-2016 RR42_RS20605 6f86b66969c181dcce09420ba1e929e8 352 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 12 165 1.9E-41 T 23-04-2016 IPR017516 AbrB duplication RR42_RS20605 6f86b66969c181dcce09420ba1e929e8 352 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 188 342 1.4E-36 T 23-04-2016 IPR017516 AbrB duplication RR42_RS20605 6f86b66969c181dcce09420ba1e929e8 352 PIRSF PIRSF038991 6 350 5.3E-84 T 23-04-2016 IPR007820 AbrB family GO:0010468|GO:0016021 RR42_RS24115 7f5123d4f18d9ad593b213fd25b3fa33 160 Pfam PF00873 AcrB/AcrD/AcrF family 3 160 2.2E-62 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS24115 7f5123d4f18d9ad593b213fd25b3fa33 160 SUPERFAMILY SSF82866 2 159 3.79E-38 T 23-04-2016 RR42_RS24115 7f5123d4f18d9ad593b213fd25b3fa33 160 PRINTS PR00702 Acriflavin resistance protein family signature 111 134 9.5E-10 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS24115 7f5123d4f18d9ad593b213fd25b3fa33 160 PRINTS PR00702 Acriflavin resistance protein family signature 2 25 9.5E-10 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS24115 7f5123d4f18d9ad593b213fd25b3fa33 160 PRINTS PR00702 Acriflavin resistance protein family signature 57 81 9.5E-10 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS24115 7f5123d4f18d9ad593b213fd25b3fa33 160 PRINTS PR00702 Acriflavin resistance protein family signature 136 159 9.5E-10 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS24115 7f5123d4f18d9ad593b213fd25b3fa33 160 Gene3D G3DSA:1.10.3850.10 2 159 1.2E-43 T 23-04-2016 RR42_RS24115 7f5123d4f18d9ad593b213fd25b3fa33 160 PANTHER PTHR32063:SF21 1 160 1.9E-108 T 23-04-2016 RR42_RS24115 7f5123d4f18d9ad593b213fd25b3fa33 160 PANTHER PTHR32063 1 160 1.9E-108 T 23-04-2016 RR42_RS37745 1982d33bbd1e55e0489036b5c6d767bb 117 SMART SM00530 25 79 4.2E-5 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RR42_RS37745 1982d33bbd1e55e0489036b5c6d767bb 117 Pfam PF13560 Helix-turn-helix domain 21 75 3.2E-8 T 23-04-2016 RR42_RS37745 1982d33bbd1e55e0489036b5c6d767bb 117 Gene3D G3DSA:1.10.260.40 16 60 2.6E-9 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS37745 1982d33bbd1e55e0489036b5c6d767bb 117 SUPERFAMILY SSF47413 19 76 1.01E-9 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS07695 795152bc891787acca0ffd74cedc0089 303 PANTHER PTHR30537:SF5 1 299 3.1E-104 T 23-04-2016 RR42_RS07695 795152bc891787acca0ffd74cedc0089 303 Gene3D G3DSA:3.40.190.10 91 165 4.8E-7 T 23-04-2016 RR42_RS07695 795152bc891787acca0ffd74cedc0089 303 Pfam PF03466 LysR substrate binding domain 88 298 1.2E-46 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS07695 795152bc891787acca0ffd74cedc0089 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 5.9E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS07695 795152bc891787acca0ffd74cedc0089 303 SUPERFAMILY SSF46785 5 87 1.21E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS07695 795152bc891787acca0ffd74cedc0089 303 PANTHER PTHR30537 1 299 3.1E-104 T 23-04-2016 RR42_RS07695 795152bc891787acca0ffd74cedc0089 303 Gene3D G3DSA:1.10.10.10 4 85 4.1E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS07695 795152bc891787acca0ffd74cedc0089 303 Gene3D G3DSA:3.40.190.10 166 261 8.7E-28 T 23-04-2016 RR42_RS07695 795152bc891787acca0ffd74cedc0089 303 SUPERFAMILY SSF53850 90 301 2.95E-44 T 23-04-2016 RR42_RS12855 b8249dfdd6891e8f9c3d43bed80db7f8 162 Pfam PF02576 Putative ribosome maturation factor RimP 6 146 1.5E-34 T 23-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 RR42_RS12855 b8249dfdd6891e8f9c3d43bed80db7f8 162 PANTHER PTHR33867 3 147 2.0E-29 T 23-04-2016 RR42_RS12855 b8249dfdd6891e8f9c3d43bed80db7f8 162 Gene3D G3DSA:2.30.30.180 78 147 8.7E-12 T 23-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal RR42_RS12855 b8249dfdd6891e8f9c3d43bed80db7f8 162 SUPERFAMILY SSF75420 3 74 4.71E-14 T 23-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal RR42_RS12855 b8249dfdd6891e8f9c3d43bed80db7f8 162 SUPERFAMILY SSF74942 75 150 2.88E-13 T 23-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal RR42_RS12855 b8249dfdd6891e8f9c3d43bed80db7f8 162 PANTHER PTHR33867:SF1 3 147 2.0E-29 T 23-04-2016 RR42_RS12855 b8249dfdd6891e8f9c3d43bed80db7f8 162 Gene3D G3DSA:3.30.300.70 3 71 6.6E-15 T 23-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal RR42_RS12855 b8249dfdd6891e8f9c3d43bed80db7f8 162 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 1 150 20.859 T 23-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 RR42_RS18630 393368cca3383073ff50689527647354 310 PANTHER PTHR30346 1 301 4.0E-59 T 23-04-2016 RR42_RS18630 393368cca3383073ff50689527647354 310 SUPERFAMILY SSF46785 1 109 2.27E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS18630 393368cca3383073ff50689527647354 310 Gene3D G3DSA:3.40.190.10 90 176 1.6E-15 T 23-04-2016 RR42_RS18630 393368cca3383073ff50689527647354 310 Gene3D G3DSA:3.40.190.10 177 246 3.5E-12 T 23-04-2016 RR42_RS18630 393368cca3383073ff50689527647354 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.2E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS18630 393368cca3383073ff50689527647354 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.2E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS18630 393368cca3383073ff50689527647354 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.2E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS18630 393368cca3383073ff50689527647354 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.4E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS18630 393368cca3383073ff50689527647354 310 SUPERFAMILY SSF53850 89 301 3.1E-36 T 23-04-2016 RR42_RS18630 393368cca3383073ff50689527647354 310 Pfam PF03466 LysR substrate binding domain 87 296 3.9E-36 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS18630 393368cca3383073ff50689527647354 310 PANTHER PTHR30346:SF3 1 301 4.0E-59 T 23-04-2016 RR42_RS18630 393368cca3383073ff50689527647354 310 Gene3D G3DSA:1.10.10.10 1 84 4.7E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS11955 e7012c74d9440aeab244b54151940fa9 297 Gene3D G3DSA:1.10.8.10 9 100 7.4E-9 T 23-04-2016 RR42_RS11955 e7012c74d9440aeab244b54151940fa9 297 PANTHER PTHR18895:SF66 9 295 3.9E-110 T 23-04-2016 RR42_RS11955 e7012c74d9440aeab244b54151940fa9 297 PANTHER PTHR18895 9 295 3.9E-110 T 23-04-2016 RR42_RS11955 e7012c74d9440aeab244b54151940fa9 297 Pfam PF05175 Methyltransferase small domain 130 213 4.7E-14 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 RR42_RS11955 e7012c74d9440aeab244b54151940fa9 297 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 7 291 2.7E-120 T 23-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 RR42_RS11955 e7012c74d9440aeab244b54151940fa9 297 SUPERFAMILY SSF53335 10 264 1.66E-47 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS11955 e7012c74d9440aeab244b54151940fa9 297 Gene3D G3DSA:3.40.50.150 102 271 4.4E-50 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS11955 e7012c74d9440aeab244b54151940fa9 297 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 201 207 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RR42_RS11955 e7012c74d9440aeab244b54151940fa9 297 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 9 278 2.0E-59 T 23-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 RR42_RS11955 e7012c74d9440aeab244b54151940fa9 297 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 1 297 49.764 T 23-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 RR42_RS11955 e7012c74d9440aeab244b54151940fa9 297 PIRSF PIRSF037167 1 297 2.5E-121 T 23-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 RR42_RS00165 affc3fcfdaa847e7d2a60b6172e72e16 97 SUPERFAMILY SSF50465 3 96 7.19E-9 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RR42_RS00165 affc3fcfdaa847e7d2a60b6172e72e16 97 Gene3D G3DSA:2.40.30.10 4 97 1.5E-7 T 23-04-2016 RR42_RS11545 c8ed4f9688402fb7fc4a35bf6e054a51 78 Pfam PF01361 Tautomerase enzyme 2 57 7.8E-18 T 23-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 RR42_RS11545 c8ed4f9688402fb7fc4a35bf6e054a51 78 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 63 7.4E-21 T 23-04-2016 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 RR42_RS11545 c8ed4f9688402fb7fc4a35bf6e054a51 78 PANTHER PTHR35530 1 66 3.4E-21 T 23-04-2016 RR42_RS11545 c8ed4f9688402fb7fc4a35bf6e054a51 78 PANTHER PTHR35530:SF1 1 66 3.4E-21 T 23-04-2016 RR42_RS11545 c8ed4f9688402fb7fc4a35bf6e054a51 78 SUPERFAMILY SSF55331 2 66 3.24E-22 T 23-04-2016 IPR014347 Tautomerase/MIF superfamily RR42_RS11545 c8ed4f9688402fb7fc4a35bf6e054a51 78 Gene3D G3DSA:3.30.429.20 1 65 6.3E-26 T 23-04-2016 RR42_RS15450 70837cc3fcf81d0cb6d86dabf1e2fbd2 252 SUPERFAMILY SSF48452 135 238 1.29E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS15450 70837cc3fcf81d0cb6d86dabf1e2fbd2 252 Pfam PF16331 TolA binding protein trimerisation 56 117 7.5E-19 T 23-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 RR42_RS15450 70837cc3fcf81d0cb6d86dabf1e2fbd2 252 Gene3D G3DSA:1.25.40.10 135 238 8.5E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS15450 70837cc3fcf81d0cb6d86dabf1e2fbd2 252 PANTHER PTHR26312:SF74 142 249 2.0E-16 T 23-04-2016 RR42_RS15450 70837cc3fcf81d0cb6d86dabf1e2fbd2 252 PANTHER PTHR26312:SF74 23 30 2.0E-16 T 23-04-2016 RR42_RS15450 70837cc3fcf81d0cb6d86dabf1e2fbd2 252 PANTHER PTHR26312 142 249 2.0E-16 T 23-04-2016 RR42_RS15450 70837cc3fcf81d0cb6d86dabf1e2fbd2 252 PANTHER PTHR26312 23 30 2.0E-16 T 23-04-2016 RR42_RS15450 70837cc3fcf81d0cb6d86dabf1e2fbd2 252 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 131 248 3.3E-38 T 23-04-2016 IPR014162 Tol-Pal system, YbgF RR42_RS15450 70837cc3fcf81d0cb6d86dabf1e2fbd2 252 Pfam PF13525 Outer membrane lipoprotein 132 252 2.9E-10 T 23-04-2016 RR42_RS07865 170ec081c70361bf49c4aa4ab69919b9 173 SUPERFAMILY SSF69118 3 172 4.56E-37 T 23-04-2016 IPR029032 AhpD-like RR42_RS07865 170ec081c70361bf49c4aa4ab69919b9 173 Gene3D G3DSA:1.20.1290.10 4 170 1.6E-40 T 23-04-2016 IPR029032 AhpD-like RR42_RS07865 170ec081c70361bf49c4aa4ab69919b9 173 Pfam PF02627 Carboxymuconolactone decarboxylase family 94 172 4.0E-13 T 23-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RR42_RS07865 170ec081c70361bf49c4aa4ab69919b9 173 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 111 161 6.9E-8 T 23-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RR42_RS07865 170ec081c70361bf49c4aa4ab69919b9 173 Hamap MF_01676 Alkyl hydroperoxide reductase AhpD [ahpD]. 1 173 72.846 T 23-04-2016 IPR004674 Alkylhydroperoxidase AhpD GO:0006979|GO:0032843|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RR42_RS02585 35b86e7106f694f89b4a2e864285795c 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 225 7.9E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS02585 35b86e7106f694f89b4a2e864285795c 227 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 16 120 1.7E-23 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RR42_RS02585 35b86e7106f694f89b4a2e864285795c 227 PANTHER PTHR30614 1 227 2.3E-115 T 23-04-2016 RR42_RS02585 35b86e7106f694f89b4a2e864285795c 227 Gene3D G3DSA:1.10.3720.10 17 225 6.4E-45 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS02585 35b86e7106f694f89b4a2e864285795c 227 SUPERFAMILY SSF161098 18 217 2.49E-38 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS02585 35b86e7106f694f89b4a2e864285795c 227 PANTHER PTHR30614:SF1 1 227 2.3E-115 T 23-04-2016 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM GO:0006865|GO:0016021|GO:0043190 RR42_RS14425 d8ce9436e1fa6abdd8d59f6c66240226 371 PANTHER PTHR30483:SF16 25 361 1.1E-123 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RR42_RS14425 d8ce9436e1fa6abdd8d59f6c66240226 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 89 99 3.1E-36 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RR42_RS14425 d8ce9436e1fa6abdd8d59f6c66240226 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 49 65 3.1E-36 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RR42_RS14425 d8ce9436e1fa6abdd8d59f6c66240226 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 27 43 3.1E-36 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RR42_RS14425 d8ce9436e1fa6abdd8d59f6c66240226 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 68 86 3.1E-36 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RR42_RS14425 d8ce9436e1fa6abdd8d59f6c66240226 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 331 346 3.1E-36 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RR42_RS14425 d8ce9436e1fa6abdd8d59f6c66240226 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 256 274 3.1E-36 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RR42_RS14425 d8ce9436e1fa6abdd8d59f6c66240226 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 279 292 3.1E-36 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RR42_RS14425 d8ce9436e1fa6abdd8d59f6c66240226 371 PANTHER PTHR30483 25 361 1.1E-123 T 23-04-2016 RR42_RS14425 d8ce9436e1fa6abdd8d59f6c66240226 371 SUPERFAMILY SSF53822 25 364 5.3E-91 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RR42_RS14425 d8ce9436e1fa6abdd8d59f6c66240226 371 Pfam PF13458 Periplasmic binding protein 26 362 9.7E-59 T 23-04-2016 IPR028081 Leucine-binding protein domain RR42_RS14425 d8ce9436e1fa6abdd8d59f6c66240226 371 Gene3D G3DSA:3.40.50.2300 25 226 4.2E-66 T 23-04-2016 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1364 0.0 T 23-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1082 1094 - T 23-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 Gene3D G3DSA:3.90.1110.10 350 448 3.8E-63 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 Gene3D G3DSA:3.90.1110.10 156 233 3.8E-63 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 Gene3D G3DSA:2.40.50.150 1064 1078 3.9E-57 T 23-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 Gene3D G3DSA:2.40.50.150 834 943 3.9E-57 T 23-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 Gene3D G3DSA:2.40.270.10 1079 1268 2.8E-86 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 Gene3D G3DSA:2.40.270.10 799 826 2.8E-86 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1368 12.243 T 23-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 Gene3D G3DSA:2.30.150.10 596 662 2.7E-23 T 23-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 Gene3D G3DSA:3.90.1100.10 449 595 3.5E-146 T 23-04-2016 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 Gene3D G3DSA:3.90.1100.10 665 719 3.5E-146 T 23-04-2016 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 Gene3D G3DSA:3.90.1100.10 21 154 3.5E-146 T 23-04-2016 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 Gene3D G3DSA:2.40.50.100 721 798 1.8E-28 T 23-04-2016 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 SUPERFAMILY SSF64484 347 945 0.0 T 23-04-2016 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 SUPERFAMILY SSF64484 1058 1365 0.0 T 23-04-2016 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 SUPERFAMILY SSF64484 12 229 0.0 T 23-04-2016 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 Pfam PF04561 RNA polymerase Rpb2, domain 2 351 458 1.5E-15 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 Pfam PF04561 RNA polymerase Rpb2, domain 2 154 226 7.8E-6 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 Pfam PF10385 RNA polymerase beta subunit external 1 domain 595 662 4.0E-21 T 23-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 Pfam PF04560 RNA polymerase Rpb2, domain 7 1292 1365 2.1E-26 T 23-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 PANTHER PTHR20856:SF20 1198 1365 0.0 T 23-04-2016 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 PANTHER PTHR20856:SF20 1053 1147 0.0 T 23-04-2016 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 PANTHER PTHR20856:SF20 5 233 0.0 T 23-04-2016 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 PANTHER PTHR20856:SF20 344 731 0.0 T 23-04-2016 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 PANTHER PTHR20856:SF20 749 936 0.0 T 23-04-2016 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 Pfam PF00562 RNA polymerase Rpb2, domain 6 724 1290 1.1E-158 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 Pfam PF04563 RNA polymerase beta subunit 27 504 1.2E-34 T 23-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 PANTHER PTHR20856 1198 1365 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 PANTHER PTHR20856 1053 1147 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 PANTHER PTHR20856 5 233 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 PANTHER PTHR20856 344 731 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 PANTHER PTHR20856 749 936 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19320 4a47ebe2cdf44e9bfceb4c3c74d23fe4 1368 Pfam PF04565 RNA polymerase Rpb2, domain 3 517 584 9.2E-32 T 23-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS11895 f8abcffe1a239c647de0a0dc7dbd1bdb 384 SUPERFAMILY SSF53474 164 227 1.38E-7 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS11895 f8abcffe1a239c647de0a0dc7dbd1bdb 384 SUPERFAMILY SSF53474 259 271 1.38E-7 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS11895 f8abcffe1a239c647de0a0dc7dbd1bdb 384 SUPERFAMILY SSF53474 53 133 1.38E-7 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS11895 f8abcffe1a239c647de0a0dc7dbd1bdb 384 Gene3D G3DSA:3.40.50.1820 32 365 3.0E-45 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS11895 f8abcffe1a239c647de0a0dc7dbd1bdb 384 PANTHER PTHR35560 45 373 5.2E-59 T 23-04-2016 RR42_RS17470 8e8436feec9076204bbe325dd922d4a9 170 Pfam PF00293 NUDIX domain 11 127 5.8E-11 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RR42_RS17470 8e8436feec9076204bbe325dd922d4a9 170 PANTHER PTHR22769 12 158 5.6E-14 T 23-04-2016 RR42_RS17470 8e8436feec9076204bbe325dd922d4a9 170 SUPERFAMILY SSF55811 2 152 8.67E-23 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RR42_RS17470 8e8436feec9076204bbe325dd922d4a9 170 Gene3D G3DSA:3.90.79.10 7 159 3.3E-27 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RR42_RS06635 8d8d6e0c9dc5a937067ee283d46dd4e8 143 PANTHER PTHR30204:SF15 12 141 5.2E-28 T 23-04-2016 RR42_RS06635 8d8d6e0c9dc5a937067ee283d46dd4e8 143 SMART SM00422 20 90 5.9E-6 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RR42_RS06635 8d8d6e0c9dc5a937067ee283d46dd4e8 143 Gene3D G3DSA:1.10.1660.10 17 88 2.3E-17 T 23-04-2016 RR42_RS06635 8d8d6e0c9dc5a937067ee283d46dd4e8 143 Pfam PF13411 MerR HTH family regulatory protein 20 88 1.5E-21 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RR42_RS06635 8d8d6e0c9dc5a937067ee283d46dd4e8 143 PANTHER PTHR30204 12 141 5.2E-28 T 23-04-2016 RR42_RS06635 8d8d6e0c9dc5a937067ee283d46dd4e8 143 SUPERFAMILY SSF46955 18 126 3.25E-19 T 23-04-2016 IPR009061 Putative DNA-binding domain RR42_RS00400 314a276b118af702e0013ce4dedfd612 400 PANTHER PTHR23505:SF8 3 393 2.9E-147 T 23-04-2016 RR42_RS00400 314a276b118af702e0013ce4dedfd612 400 Pfam PF07690 Major Facilitator Superfamily 23 346 2.0E-38 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS00400 314a276b118af702e0013ce4dedfd612 400 PANTHER PTHR23505 3 393 2.9E-147 T 23-04-2016 RR42_RS00400 314a276b118af702e0013ce4dedfd612 400 Gene3D G3DSA:1.20.1250.20 16 185 4.4E-19 T 23-04-2016 RR42_RS00400 314a276b118af702e0013ce4dedfd612 400 SUPERFAMILY SSF103473 11 390 3.01E-57 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS00400 314a276b118af702e0013ce4dedfd612 400 Gene3D G3DSA:1.20.1250.20 218 390 2.8E-21 T 23-04-2016 RR42_RS19000 bdcb41a852fc5b2f4136d3800fbbff6e 378 SUPERFAMILY SSF109604 20 372 1.49E-93 T 23-04-2016 RR42_RS19000 bdcb41a852fc5b2f4136d3800fbbff6e 378 PANTHER PTHR11373 8 376 1.2E-80 T 23-04-2016 RR42_RS19000 bdcb41a852fc5b2f4136d3800fbbff6e 378 Pfam PF01966 HD domain 68 198 1.1E-15 T 23-04-2016 IPR006674 HD domain RR42_RS19000 bdcb41a852fc5b2f4136d3800fbbff6e 378 PANTHER PTHR11373:SF25 8 376 1.2E-80 T 23-04-2016 RR42_RS19000 bdcb41a852fc5b2f4136d3800fbbff6e 378 Pfam PF13286 Phosphohydrolase-associated domain 284 370 2.3E-28 T 23-04-2016 IPR026875 Phosphohydrolase-associated domain RR42_RS19000 bdcb41a852fc5b2f4136d3800fbbff6e 378 Gene3D G3DSA:1.10.3210.10 274 373 2.7E-83 T 23-04-2016 IPR006674 HD domain RR42_RS19000 bdcb41a852fc5b2f4136d3800fbbff6e 378 Gene3D G3DSA:1.10.3210.10 29 217 2.7E-83 T 23-04-2016 IPR006674 HD domain RR42_RS19000 bdcb41a852fc5b2f4136d3800fbbff6e 378 SMART SM00471 64 208 3.2E-11 T 23-04-2016 IPR003607 HD/PDEase domain RR42_RS19000 bdcb41a852fc5b2f4136d3800fbbff6e 378 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 31 165 5.5E-58 T 23-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 RR42_RS19000 bdcb41a852fc5b2f4136d3800fbbff6e 378 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 8 372 38.634 T 23-04-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 RR42_RS03100 a3b02e416043470baac658719d4bfa1d 293 SMART SM00881 4 103 1.2E-28 T 23-04-2016 IPR003781 CoA-binding GO:0048037 RR42_RS03100 a3b02e416043470baac658719d4bfa1d 293 PRINTS PR01798 Succinyl-CoA synthase signature 85 102 1.0E-33 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RR42_RS03100 a3b02e416043470baac658719d4bfa1d 293 PRINTS PR01798 Succinyl-CoA synthase signature 182 200 1.0E-33 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RR42_RS03100 a3b02e416043470baac658719d4bfa1d 293 PRINTS PR01798 Succinyl-CoA synthase signature 213 226 1.0E-33 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RR42_RS03100 a3b02e416043470baac658719d4bfa1d 293 PRINTS PR01798 Succinyl-CoA synthase signature 245 262 1.0E-33 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RR42_RS03100 a3b02e416043470baac658719d4bfa1d 293 SUPERFAMILY SSF52210 128 291 2.09E-52 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RR42_RS03100 a3b02e416043470baac658719d4bfa1d 293 Pfam PF02629 CoA binding domain 6 102 8.1E-24 T 23-04-2016 IPR003781 CoA-binding GO:0048037 RR42_RS03100 a3b02e416043470baac658719d4bfa1d 293 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 241 254 - T 23-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site RR42_RS03100 a3b02e416043470baac658719d4bfa1d 293 Gene3D G3DSA:3.40.50.720 2 124 3.1E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS03100 a3b02e416043470baac658719d4bfa1d 293 SUPERFAMILY SSF51735 1 127 4.2E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS03100 a3b02e416043470baac658719d4bfa1d 293 PANTHER PTHR11117 1 293 1.5E-157 T 23-04-2016 RR42_RS03100 a3b02e416043470baac658719d4bfa1d 293 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 157 186 - T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RR42_RS03100 a3b02e416043470baac658719d4bfa1d 293 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 293 2.8E-126 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RR42_RS03100 a3b02e416043470baac658719d4bfa1d 293 Gene3D G3DSA:3.40.50.261 125 292 6.0E-71 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RR42_RS03100 a3b02e416043470baac658719d4bfa1d 293 PANTHER PTHR11117:SF2 1 293 1.5E-157 T 23-04-2016 RR42_RS03100 a3b02e416043470baac658719d4bfa1d 293 PIRSF PIRSF001553 1 293 2.3E-116 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RR42_RS03100 a3b02e416043470baac658719d4bfa1d 293 Pfam PF00549 CoA-ligase 156 271 4.0E-15 T 23-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RR42_RS15355 701dd0aff347e76d41dbce83bca31f39 280 PANTHER PTHR10992:SF771 33 275 3.9E-46 T 23-04-2016 RR42_RS15355 701dd0aff347e76d41dbce83bca31f39 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 57 72 2.3E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS15355 701dd0aff347e76d41dbce83bca31f39 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 102 115 2.3E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS15355 701dd0aff347e76d41dbce83bca31f39 280 Pfam PF12697 Alpha/beta hydrolase family 33 267 1.6E-21 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS15355 701dd0aff347e76d41dbce83bca31f39 280 PANTHER PTHR10992 33 275 3.9E-46 T 23-04-2016 RR42_RS15355 701dd0aff347e76d41dbce83bca31f39 280 Gene3D G3DSA:3.40.50.1820 22 276 3.1E-55 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS15355 701dd0aff347e76d41dbce83bca31f39 280 PRINTS PR00412 Epoxide hydrolase signature 57 72 5.1E-9 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS15355 701dd0aff347e76d41dbce83bca31f39 280 PRINTS PR00412 Epoxide hydrolase signature 250 272 5.1E-9 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS15355 701dd0aff347e76d41dbce83bca31f39 280 PRINTS PR00412 Epoxide hydrolase signature 37 55 5.1E-9 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS15355 701dd0aff347e76d41dbce83bca31f39 280 PRINTS PR00412 Epoxide hydrolase signature 102 115 5.1E-9 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS15355 701dd0aff347e76d41dbce83bca31f39 280 SUPERFAMILY SSF53474 25 274 6.35E-56 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS17955 14cf0ac8ebd0d0c84b575c1873322794 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 23-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS17955 14cf0ac8ebd0d0c84b575c1873322794 103 SUPERFAMILY SSF141091 1 101 1.22E-38 T 23-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 RR42_RS17955 14cf0ac8ebd0d0c84b575c1873322794 103 PANTHER PTHR21349 1 103 1.2E-46 T 23-04-2016 RR42_RS17955 14cf0ac8ebd0d0c84b575c1873322794 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.003 T 23-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS17955 14cf0ac8ebd0d0c84b575c1873322794 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.2E-36 T 23-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS17955 14cf0ac8ebd0d0c84b575c1873322794 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.4E-41 T 23-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 RR42_RS00955 60abe5c54fcf282bcf7f880dba57abe7 311 Gene3D G3DSA:3.20.20.70 5 291 3.9E-89 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS00955 60abe5c54fcf282bcf7f880dba57abe7 311 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 233 242 - T 23-04-2016 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|UniPathway: UPA00896 RR42_RS00955 60abe5c54fcf282bcf7f880dba57abe7 311 SUPERFAMILY SSF51569 1 291 1.19E-71 T 23-04-2016 RR42_RS00955 60abe5c54fcf282bcf7f880dba57abe7 311 Pfam PF00682 HMGL-like 7 280 3.3E-54 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RR42_RS00955 60abe5c54fcf282bcf7f880dba57abe7 311 PANTHER PTHR10277:SF40 2 296 4.6E-179 T 23-04-2016 RR42_RS00955 60abe5c54fcf282bcf7f880dba57abe7 311 PANTHER PTHR10277 2 296 4.6E-179 T 23-04-2016 RR42_RS16595 3e0f0ebdebaa93dae97ffc1cf6888a9c 412 SUPERFAMILY SSF53901 4 118 2.82E-40 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS16595 3e0f0ebdebaa93dae97ffc1cf6888a9c 412 SUPERFAMILY SSF53901 205 376 2.82E-40 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS16595 3e0f0ebdebaa93dae97ffc1cf6888a9c 412 PIRSF PIRSF000429 1 405 1.9E-63 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RR42_RS16595 3e0f0ebdebaa93dae97ffc1cf6888a9c 412 Gene3D G3DSA:3.40.47.10 1 120 3.2E-22 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS16595 3e0f0ebdebaa93dae97ffc1cf6888a9c 412 Gene3D G3DSA:3.40.47.10 196 256 3.2E-22 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS16595 3e0f0ebdebaa93dae97ffc1cf6888a9c 412 Pfam PF02803 Thiolase, C-terminal domain 282 374 1.8E-10 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RR42_RS16595 3e0f0ebdebaa93dae97ffc1cf6888a9c 412 Gene3D G3DSA:3.40.47.10 171 195 7.9E-19 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS16595 3e0f0ebdebaa93dae97ffc1cf6888a9c 412 Gene3D G3DSA:3.40.47.10 263 392 7.9E-19 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS16595 3e0f0ebdebaa93dae97ffc1cf6888a9c 412 Pfam PF00108 Thiolase, N-terminal domain 4 247 1.6E-17 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RR42_RS16595 3e0f0ebdebaa93dae97ffc1cf6888a9c 412 PANTHER PTHR18919 1 134 1.3E-92 T 23-04-2016 RR42_RS16595 3e0f0ebdebaa93dae97ffc1cf6888a9c 412 PANTHER PTHR18919 150 407 1.3E-92 T 23-04-2016 RR42_RS16595 3e0f0ebdebaa93dae97ffc1cf6888a9c 412 PANTHER PTHR18919:SF8 1 134 1.3E-92 T 23-04-2016 RR42_RS16595 3e0f0ebdebaa93dae97ffc1cf6888a9c 412 PANTHER PTHR18919:SF8 150 407 1.3E-92 T 23-04-2016 RR42_RS13060 8b4274422621662f833289d1474ef3e3 247 Gene3D G3DSA:3.30.1330.30 1 77 2.1E-20 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like RR42_RS13060 8b4274422621662f833289d1474ef3e3 247 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 244 44.495 T 23-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB RR42_RS13060 8b4274422621662f833289d1474ef3e3 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 2.1E-74 T 23-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 RR42_RS13060 8b4274422621662f833289d1474ef3e3 247 PANTHER PTHR12029 6 244 6.7E-72 T 23-04-2016 RR42_RS13060 8b4274422621662f833289d1474ef3e3 247 SUPERFAMILY SSF55315 3 78 6.94E-17 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like RR42_RS13060 8b4274422621662f833289d1474ef3e3 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 77 3.3E-15 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 RR42_RS13060 8b4274422621662f833289d1474ef3e3 247 Pfam PF00588 SpoU rRNA Methylase family 97 237 1.7E-41 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RR42_RS13060 8b4274422621662f833289d1474ef3e3 247 SUPERFAMILY SSF75217 91 244 1.18E-49 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases RR42_RS13060 8b4274422621662f833289d1474ef3e3 247 Gene3D G3DSA:3.40.1280.10 94 245 8.2E-56 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RR42_RS13060 8b4274422621662f833289d1474ef3e3 247 SMART SM00967 6 82 8.4E-17 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 Gene3D G3DSA:2.70.150.10 19 59 1.5E-30 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 Gene3D G3DSA:2.70.150.10 113 233 1.5E-30 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 223 370 8.4E-23 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 569 689 6.7E-25 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 4 857 0.0 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 Gene3D G3DSA:3.40.1110.10 324 508 3.0E-33 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 Pfam PF00690 Cation transporter/ATPase, N-terminus 12 75 3.8E-12 T 23-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 Pfam PF00122 E1-E2 ATPase 85 323 4.2E-51 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 PANTHER PTHR24093 20 860 0.0 T 23-04-2016 RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 PANTHER PTHR24093:SF128 20 860 0.0 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 SUPERFAMILY SSF81665 650 854 6.8E-96 T 23-04-2016 RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 SUPERFAMILY SSF81665 11 118 6.8E-96 T 23-04-2016 RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 SUPERFAMILY SSF81665 233 326 6.8E-96 T 23-04-2016 RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 PRINTS PR01836 Magnesium-transporting ATPase signature 729 745 7.7E-56 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 PRINTS PR01836 Magnesium-transporting ATPase signature 245 261 7.7E-56 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 PRINTS PR01836 Magnesium-transporting ATPase signature 366 379 7.7E-56 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 PRINTS PR01836 Magnesium-transporting ATPase signature 814 835 7.7E-56 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 PRINTS PR01836 Magnesium-transporting ATPase signature 764 785 7.7E-56 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 PRINTS PR01836 Magnesium-transporting ATPase signature 262 281 7.7E-56 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 PRINTS PR01836 Magnesium-transporting ATPase signature 709 722 7.7E-56 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 PRINTS PR01836 Magnesium-transporting ATPase signature 677 688 7.7E-56 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 PRINTS PR01836 Magnesium-transporting ATPase signature 659 674 7.7E-56 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 Gene3D G3DSA:1.20.1110.10 60 112 2.7E-60 T 23-04-2016 IPR023298 P-type ATPase, transmembrane domain RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 Gene3D G3DSA:1.20.1110.10 570 824 2.7E-60 T 23-04-2016 IPR023298 P-type ATPase, transmembrane domain RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 334 340 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 SUPERFAMILY SSF56784 455 700 5.44E-35 T 23-04-2016 IPR023214 HAD-like domain RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 SUPERFAMILY SSF56784 330 350 5.44E-35 T 23-04-2016 IPR023214 HAD-like domain RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 SMART SM00831 7 80 9.3E-13 T 23-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 Pfam PF00702 haloacid dehalogenase-like hydrolase 328 615 6.4E-21 T 23-04-2016 RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 SUPERFAMILY SSF81653 136 232 9.29E-24 T 23-04-2016 RR42_RS11630 b958b8e8d4c5fac88e2ba96b82f93218 860 Pfam PF00689 Cation transporting ATPase, C-terminus 684 845 3.5E-16 T 23-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal RR42_RS00140 a8ca8078eed3f897b2fe8318e14c884d 612 Gene3D G3DSA:3.10.20.310 92 172 6.0E-23 T 23-04-2016 RR42_RS00140 a8ca8078eed3f897b2fe8318e14c884d 612 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 227 578 9.9E-27 T 23-04-2016 IPR005565 Haemolysin activator HlyB RR42_RS00140 a8ca8078eed3f897b2fe8318e14c884d 612 Pfam PF08479 POTRA domain, ShlB-type 97 172 6.8E-21 T 23-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type RR42_RS00140 a8ca8078eed3f897b2fe8318e14c884d 612 PANTHER PTHR34597 49 194 1.6E-90 T 23-04-2016 RR42_RS00140 a8ca8078eed3f897b2fe8318e14c884d 612 PANTHER PTHR34597 224 612 1.6E-90 T 23-04-2016 RR42_RS00140 a8ca8078eed3f897b2fe8318e14c884d 612 Gene3D G3DSA:2.40.160.50 233 611 3.9E-77 T 23-04-2016 RR42_RS00140 a8ca8078eed3f897b2fe8318e14c884d 612 PIRSF PIRSF029745 11 612 5.5E-131 T 23-04-2016 IPR027282 Two partner secretion pathway transporter GO:0015031 RR42_RS00140 a8ca8078eed3f897b2fe8318e14c884d 612 PANTHER PTHR34597:SF2 49 194 1.6E-90 T 23-04-2016 RR42_RS00140 a8ca8078eed3f897b2fe8318e14c884d 612 PANTHER PTHR34597:SF2 224 612 1.6E-90 T 23-04-2016 RR42_RS16205 e55d0c7340662f6b68fc3e8292dbc641 340 PANTHER PTHR30346:SF0 1 323 3.3E-92 T 23-04-2016 RR42_RS16205 e55d0c7340662f6b68fc3e8292dbc641 340 Gene3D G3DSA:3.40.190.10 172 276 1.9E-41 T 23-04-2016 RR42_RS16205 e55d0c7340662f6b68fc3e8292dbc641 340 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.0E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS16205 e55d0c7340662f6b68fc3e8292dbc641 340 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.0E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS16205 e55d0c7340662f6b68fc3e8292dbc641 340 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.0E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS16205 e55d0c7340662f6b68fc3e8292dbc641 340 SUPERFAMILY SSF53850 91 302 1.78E-35 T 23-04-2016 RR42_RS16205 e55d0c7340662f6b68fc3e8292dbc641 340 Gene3D G3DSA:3.40.190.10 88 171 7.6E-29 T 23-04-2016 RR42_RS16205 e55d0c7340662f6b68fc3e8292dbc641 340 Pfam PF03466 LysR substrate binding domain 87 303 7.0E-40 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS16205 e55d0c7340662f6b68fc3e8292dbc641 340 Gene3D G3DSA:1.10.10.10 2 77 3.0E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS16205 e55d0c7340662f6b68fc3e8292dbc641 340 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.7E-23 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS16205 e55d0c7340662f6b68fc3e8292dbc641 340 SUPERFAMILY SSF46785 1 84 2.89E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS16205 e55d0c7340662f6b68fc3e8292dbc641 340 PANTHER PTHR30346 1 323 3.3E-92 T 23-04-2016 RR42_RS14855 7ec393e97d257c44b4b1d2be7edd3a05 563 Pfam PF01494 FAD binding domain 34 376 8.4E-55 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 RR42_RS14855 7ec393e97d257c44b4b1d2be7edd3a05 563 PANTHER PTHR13789:SF219 7 454 1.3E-92 T 23-04-2016 RR42_RS14855 7ec393e97d257c44b4b1d2be7edd3a05 563 SUPERFAMILY SSF51905 298 409 2.9E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS14855 7ec393e97d257c44b4b1d2be7edd3a05 563 SUPERFAMILY SSF51905 34 203 2.9E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS14855 7ec393e97d257c44b4b1d2be7edd3a05 563 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 326 342 2.1E-27 T 23-04-2016 RR42_RS14855 7ec393e97d257c44b4b1d2be7edd3a05 563 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 344 362 2.1E-27 T 23-04-2016 RR42_RS14855 7ec393e97d257c44b4b1d2be7edd3a05 563 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 34 56 2.1E-27 T 23-04-2016 RR42_RS14855 7ec393e97d257c44b4b1d2be7edd3a05 563 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 311 326 2.1E-27 T 23-04-2016 RR42_RS14855 7ec393e97d257c44b4b1d2be7edd3a05 563 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 182 197 2.1E-27 T 23-04-2016 RR42_RS14855 7ec393e97d257c44b4b1d2be7edd3a05 563 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 362 378 2.1E-27 T 23-04-2016 RR42_RS14855 7ec393e97d257c44b4b1d2be7edd3a05 563 Gene3D G3DSA:3.30.9.10 359 386 6.2E-10 T 23-04-2016 RR42_RS14855 7ec393e97d257c44b4b1d2be7edd3a05 563 Gene3D G3DSA:3.30.9.10 195 304 6.2E-10 T 23-04-2016 RR42_RS14855 7ec393e97d257c44b4b1d2be7edd3a05 563 PANTHER PTHR13789 7 454 1.3E-92 T 23-04-2016 RR42_RS14855 7ec393e97d257c44b4b1d2be7edd3a05 563 Gene3D G3DSA:3.50.50.60 29 194 9.6E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS14855 7ec393e97d257c44b4b1d2be7edd3a05 563 Gene3D G3DSA:3.50.50.60 309 347 9.6E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS32555 a750c95e21301587ec67440fd5064ecc 454 Pfam PF13638 PIN domain 135 280 4.1E-39 T 23-04-2016 IPR002716 PIN domain RR42_RS32555 a750c95e21301587ec67440fd5064ecc 454 PANTHER PTHR30473:SF2 132 308 7.1E-104 T 23-04-2016 RR42_RS32555 a750c95e21301587ec67440fd5064ecc 454 PANTHER PTHR30473:SF2 329 454 7.1E-104 T 23-04-2016 RR42_RS32555 a750c95e21301587ec67440fd5064ecc 454 Gene3D G3DSA:3.40.50.300 378 453 8.5E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS32555 a750c95e21301587ec67440fd5064ecc 454 Gene3D G3DSA:3.40.50.1010 134 193 7.1E-9 T 23-04-2016 IPR029060 PIN domain-like RR42_RS32555 a750c95e21301587ec67440fd5064ecc 454 Gene3D G3DSA:3.40.50.1010 231 287 7.1E-9 T 23-04-2016 IPR029060 PIN domain-like RR42_RS32555 a750c95e21301587ec67440fd5064ecc 454 SUPERFAMILY SSF88723 231 283 1.39E-10 T 23-04-2016 IPR029060 PIN domain-like RR42_RS32555 a750c95e21301587ec67440fd5064ecc 454 SUPERFAMILY SSF88723 133 194 1.39E-10 T 23-04-2016 IPR029060 PIN domain-like RR42_RS32555 a750c95e21301587ec67440fd5064ecc 454 Pfam PF02562 PhoH-like protein 381 453 4.8E-17 T 23-04-2016 IPR003714 PhoH-like protein GO:0005524 RR42_RS32555 a750c95e21301587ec67440fd5064ecc 454 PANTHER PTHR30473 132 308 7.1E-104 T 23-04-2016 RR42_RS32555 a750c95e21301587ec67440fd5064ecc 454 PANTHER PTHR30473 329 454 7.1E-104 T 23-04-2016 RR42_RS32555 a750c95e21301587ec67440fd5064ecc 454 SMART SM00670 133 268 1.3E-11 T 23-04-2016 IPR002716 PIN domain RR42_RS32555 a750c95e21301587ec67440fd5064ecc 454 SUPERFAMILY SSF52540 286 299 3.66E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS32555 a750c95e21301587ec67440fd5064ecc 454 SUPERFAMILY SSF52540 380 452 3.66E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05665 d789fb28bd641c3d4b9a48508c1df258 210 Pfam PF04955 HupE / UreJ protein 22 207 5.3E-59 T 23-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein RR42_RS05665 d789fb28bd641c3d4b9a48508c1df258 210 PIRSF PIRSF016919 11 210 4.4E-52 T 23-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein RR42_RS04475 910d0212d5f68898e7f088382dff5af7 436 PANTHER PTHR21090 1 431 8.7E-191 T 23-04-2016 RR42_RS04475 910d0212d5f68898e7f088382dff5af7 436 Gene3D G3DSA:3.65.10.10 22 241 2.4E-69 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RR42_RS04475 910d0212d5f68898e7f088382dff5af7 436 Gene3D G3DSA:3.65.10.10 242 431 2.2E-69 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RR42_RS04475 910d0212d5f68898e7f088382dff5af7 436 ProSitePatterns PS00885 EPSP synthase signature 2. 345 363 - T 23-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RR42_RS04475 910d0212d5f68898e7f088382dff5af7 436 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 430 2.5E-130 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RR42_RS04475 910d0212d5f68898e7f088382dff5af7 436 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 432 8.6E-138 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RR42_RS04475 910d0212d5f68898e7f088382dff5af7 436 PANTHER PTHR21090:SF21 1 431 8.7E-191 T 23-04-2016 RR42_RS04475 910d0212d5f68898e7f088382dff5af7 436 ProSitePatterns PS00104 EPSP synthase signature 1. 87 101 - T 23-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RR42_RS04475 910d0212d5f68898e7f088382dff5af7 436 SUPERFAMILY SSF55205 1 433 4.84E-126 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 RR42_RS04475 910d0212d5f68898e7f088382dff5af7 436 PIRSF PIRSF000505 4 436 3.5E-141 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RR42_RS04475 910d0212d5f68898e7f088382dff5af7 436 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 436 33.058 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RR42_RS17840 3f6c03353770a71ec537e2b25a90fea3 306 Pfam PF03466 LysR substrate binding domain 95 301 1.0E-43 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS17840 3f6c03353770a71ec537e2b25a90fea3 306 Gene3D G3DSA:3.40.190.10 98 182 1.8E-23 T 23-04-2016 RR42_RS17840 3f6c03353770a71ec537e2b25a90fea3 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 3.0E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS17840 3f6c03353770a71ec537e2b25a90fea3 306 SUPERFAMILY SSF53850 96 304 2.79E-47 T 23-04-2016 RR42_RS17840 3f6c03353770a71ec537e2b25a90fea3 306 SUPERFAMILY SSF46785 11 90 3.63E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS17840 3f6c03353770a71ec537e2b25a90fea3 306 PANTHER PTHR30537 1 303 5.2E-106 T 23-04-2016 RR42_RS17840 3f6c03353770a71ec537e2b25a90fea3 306 PANTHER PTHR30537:SF5 1 303 5.2E-106 T 23-04-2016 RR42_RS17840 3f6c03353770a71ec537e2b25a90fea3 306 Gene3D G3DSA:3.40.190.10 183 264 2.0E-9 T 23-04-2016 RR42_RS17840 3f6c03353770a71ec537e2b25a90fea3 306 Gene3D G3DSA:1.10.10.10 12 86 3.1E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS00010 4a2f4d57a29194de801817be7fa4fd34 374 SUPERFAMILY SSF55979 128 252 3.92E-26 T 23-04-2016 RR42_RS00010 4a2f4d57a29194de801817be7fa4fd34 374 Gene3D G3DSA:3.10.150.10 127 256 3.0E-37 T 23-04-2016 RR42_RS00010 4a2f4d57a29194de801817be7fa4fd34 374 SUPERFAMILY SSF55979 253 374 1.33E-36 T 23-04-2016 RR42_RS00010 4a2f4d57a29194de801817be7fa4fd34 374 SUPERFAMILY SSF55979 5 117 3.14E-21 T 23-04-2016 RR42_RS00010 4a2f4d57a29194de801817be7fa4fd34 374 PANTHER PTHR30478 4 374 2.4E-117 T 23-04-2016 RR42_RS00010 4a2f4d57a29194de801817be7fa4fd34 374 PIRSF PIRSF000804 1 374 1.7E-112 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS00010 4a2f4d57a29194de801817be7fa4fd34 374 Pfam PF02767 DNA polymerase III beta subunit, central domain 131 251 2.9E-33 T 23-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS00010 4a2f4d57a29194de801817be7fa4fd34 374 SMART SM00480 18 370 1.4E-112 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS00010 4a2f4d57a29194de801817be7fa4fd34 374 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 6 373 5.2E-99 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS00010 4a2f4d57a29194de801817be7fa4fd34 374 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 7 119 7.7E-29 T 23-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS00010 4a2f4d57a29194de801817be7fa4fd34 374 Gene3D G3DSA:3.10.150.10 5 119 1.3E-24 T 23-04-2016 RR42_RS00010 4a2f4d57a29194de801817be7fa4fd34 374 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 254 373 9.5E-35 T 23-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS00010 4a2f4d57a29194de801817be7fa4fd34 374 Gene3D G3DSA:3.10.150.10 257 374 5.2E-38 T 23-04-2016 RR42_RS15130 9f7bdc6fd40688d41d2e1f1632eabed5 403 Gene3D G3DSA:1.20.1250.20 25 202 5.4E-8 T 23-04-2016 RR42_RS15130 9f7bdc6fd40688d41d2e1f1632eabed5 403 Gene3D G3DSA:1.20.1250.20 223 402 2.2E-14 T 23-04-2016 RR42_RS15130 9f7bdc6fd40688d41d2e1f1632eabed5 403 PANTHER PTHR23537:SF1 10 401 5.0E-52 T 23-04-2016 RR42_RS15130 9f7bdc6fd40688d41d2e1f1632eabed5 403 PANTHER PTHR23537 10 401 5.0E-52 T 23-04-2016 RR42_RS15130 9f7bdc6fd40688d41d2e1f1632eabed5 403 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 35 394 9.2E-106 T 23-04-2016 IPR010645 Uncharacterised MFS-type transporter YbfB RR42_RS15130 9f7bdc6fd40688d41d2e1f1632eabed5 403 SUPERFAMILY SSF103473 13 402 5.89E-31 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS14215 09533f23a6d9f21b7572718f4a74024a 107 SUPERFAMILY SSF54862 3 105 2.23E-25 T 23-04-2016 RR42_RS14215 09533f23a6d9f21b7572718f4a74024a 107 Gene3D G3DSA:3.30.70.20 4 103 4.8E-22 T 23-04-2016 RR42_RS14215 09533f23a6d9f21b7572718f4a74024a 107 PANTHER PTHR11938 1 82 8.7E-41 T 23-04-2016 RR42_RS14215 09533f23a6d9f21b7572718f4a74024a 107 Pfam PF12800 4Fe-4S binding domain 7 23 0.21 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RR42_RS14215 09533f23a6d9f21b7572718f4a74024a 107 PANTHER PTHR11938:SF101 1 82 8.7E-41 T 23-04-2016 RR42_RS14215 09533f23a6d9f21b7572718f4a74024a 107 Pfam PF11953 Domain of unknown function (DUF3470) 66 107 5.3E-19 T 23-04-2016 IPR022569 Ferredoxin, C-terminal RR42_RS14215 09533f23a6d9f21b7572718f4a74024a 107 Pfam PF00037 4Fe-4S binding domain 35 56 3.8E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RR42_RS14215 09533f23a6d9f21b7572718f4a74024a 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RR42_RS14215 09533f23a6d9f21b7572718f4a74024a 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 2.5E-14 T 23-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RR42_RS14215 09533f23a6d9f21b7572718f4a74024a 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 2.5E-14 T 23-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RR42_RS14215 09533f23a6d9f21b7572718f4a74024a 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 2.5E-14 T 23-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RR42_RS17335 68355b9b44965b3ae557f451bd524ef0 229 PANTHER PTHR30363 1 167 1.1E-46 T 23-04-2016 RR42_RS17335 68355b9b44965b3ae557f451bd524ef0 229 SUPERFAMILY SSF46785 5 62 5.13E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS17335 68355b9b44965b3ae557f451bd524ef0 229 Pfam PF08279 HTH domain 7 60 4.1E-16 T 23-04-2016 IPR013196 Helix-turn-helix, type 11 RR42_RS17335 68355b9b44965b3ae557f451bd524ef0 229 PANTHER PTHR30363:SF7 1 167 1.1E-46 T 23-04-2016 RR42_RS17335 68355b9b44965b3ae557f451bd524ef0 229 Pfam PF13280 WYL domain 138 225 6.7E-18 T 23-04-2016 IPR026881 WYL domain RR42_RS17335 68355b9b44965b3ae557f451bd524ef0 229 Gene3D G3DSA:1.10.10.10 2 63 2.6E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS05210 428f01e6d1de3c31d1115885dd44fc71 773 SMART SM00919 179 416 6.7E-137 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RR42_RS05210 428f01e6d1de3c31d1115885dd44fc71 773 SUPERFAMILY SSF51735 179 468 3.85E-84 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS05210 428f01e6d1de3c31d1115885dd44fc71 773 Pfam PF00390 Malic enzyme, N-terminal domain 35 167 1.4E-29 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RR42_RS05210 428f01e6d1de3c31d1115885dd44fc71 773 Gene3D G3DSA:3.40.50.720 177 464 2.3E-87 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS05210 428f01e6d1de3c31d1115885dd44fc71 773 SMART SM01274 34 167 1.2E-80 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RR42_RS05210 428f01e6d1de3c31d1115885dd44fc71 773 Pfam PF03949 Malic enzyme, NAD binding domain 181 373 4.6E-22 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RR42_RS05210 428f01e6d1de3c31d1115885dd44fc71 773 Gene3D G3DSA:3.40.50.10750 584 741 1.7E-50 T 23-04-2016 RR42_RS05210 428f01e6d1de3c31d1115885dd44fc71 773 PANTHER PTHR23406 48 450 7.3E-165 T 23-04-2016 RR42_RS05210 428f01e6d1de3c31d1115885dd44fc71 773 PIRSF PIRSF036684 15 773 0.0 T 23-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 RR42_RS05210 428f01e6d1de3c31d1115885dd44fc71 773 SUPERFAMILY SSF53223 26 177 1.73E-54 T 23-04-2016 RR42_RS05210 428f01e6d1de3c31d1115885dd44fc71 773 Pfam PF01515 Phosphate acetyl/butaryl transferase 445 766 5.2E-94 T 23-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 RR42_RS05210 428f01e6d1de3c31d1115885dd44fc71 773 Gene3D G3DSA:3.40.50.10380 23 176 7.9E-54 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RR42_RS05210 428f01e6d1de3c31d1115885dd44fc71 773 SUPERFAMILY SSF53659 445 769 6.17E-87 T 23-04-2016 RR42_RS07515 fb0eef7167e033a81793d5b9d6511b58 312 PRINTS PR01100 Shikimate kinase family signature 215 224 3.8E-11 T 23-04-2016 RR42_RS07515 fb0eef7167e033a81793d5b9d6511b58 312 PRINTS PR01100 Shikimate kinase family signature 144 159 3.8E-11 T 23-04-2016 RR42_RS07515 fb0eef7167e033a81793d5b9d6511b58 312 PRINTS PR01100 Shikimate kinase family signature 196 204 3.8E-11 T 23-04-2016 RR42_RS07515 fb0eef7167e033a81793d5b9d6511b58 312 PRINTS PR01100 Shikimate kinase family signature 168 181 3.8E-11 T 23-04-2016 RR42_RS07515 fb0eef7167e033a81793d5b9d6511b58 312 Gene3D G3DSA:3.40.50.300 141 308 3.8E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07515 fb0eef7167e033a81793d5b9d6511b58 312 PANTHER PTHR21087 139 308 1.1E-37 T 23-04-2016 RR42_RS07515 fb0eef7167e033a81793d5b9d6511b58 312 Pfam PF01202 Shikimate kinase 150 301 2.2E-31 T 23-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 RR42_RS07515 fb0eef7167e033a81793d5b9d6511b58 312 SUPERFAMILY SSF52540 142 307 4.31E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07515 fb0eef7167e033a81793d5b9d6511b58 312 Hamap MF_00109 Shikimate kinase [aroK]. 141 308 20.585 T 23-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 RR42_RS07515 fb0eef7167e033a81793d5b9d6511b58 312 SMART SM00530 32 87 1.5E-11 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RR42_RS07515 fb0eef7167e033a81793d5b9d6511b58 312 Gene3D G3DSA:1.10.260.40 28 109 1.8E-16 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS07515 fb0eef7167e033a81793d5b9d6511b58 312 PANTHER PTHR21087:SF0 139 308 1.1E-37 T 23-04-2016 RR42_RS07515 fb0eef7167e033a81793d5b9d6511b58 312 SUPERFAMILY SSF47413 24 92 1.72E-14 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS07515 fb0eef7167e033a81793d5b9d6511b58 312 Pfam PF13560 Helix-turn-helix domain 28 86 2.5E-11 T 23-04-2016 RR42_RS04380 ee17c7c9c86abd3be1e09621b8a6c001 317 Gene3D G3DSA:1.10.10.10 1 84 1.8E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS04380 ee17c7c9c86abd3be1e09621b8a6c001 317 SUPERFAMILY SSF53850 90 298 1.18E-35 T 23-04-2016 RR42_RS04380 ee17c7c9c86abd3be1e09621b8a6c001 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.2E-15 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS04380 ee17c7c9c86abd3be1e09621b8a6c001 317 PANTHER PTHR30427 1 314 3.2E-70 T 23-04-2016 RR42_RS04380 ee17c7c9c86abd3be1e09621b8a6c001 317 SUPERFAMILY SSF46785 1 110 5.99E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS04380 ee17c7c9c86abd3be1e09621b8a6c001 317 Gene3D G3DSA:3.40.190.10 173 262 8.6E-14 T 23-04-2016 RR42_RS04380 ee17c7c9c86abd3be1e09621b8a6c001 317 Pfam PF03466 LysR substrate binding domain 89 294 8.2E-38 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS04380 ee17c7c9c86abd3be1e09621b8a6c001 317 Gene3D G3DSA:3.40.190.10 90 172 1.4E-21 T 23-04-2016 RR42_RS18995 fc2904a50f2c8998a248ad40f8a5944a 240 SMART SM01321 9 124 6.5E-34 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RR42_RS18995 fc2904a50f2c8998a248ad40f8a5944a 240 Pfam PF01797 Transposase IS200 like 17 123 4.3E-13 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RR42_RS18995 fc2904a50f2c8998a248ad40f8a5944a 240 Gene3D G3DSA:3.30.70.1290 21 124 1.7E-8 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RR42_RS18995 fc2904a50f2c8998a248ad40f8a5944a 240 PANTHER PTHR34322:SF1 2 234 1.1E-23 T 23-04-2016 RR42_RS18995 fc2904a50f2c8998a248ad40f8a5944a 240 PANTHER PTHR34322 2 234 1.1E-23 T 23-04-2016 RR42_RS18995 fc2904a50f2c8998a248ad40f8a5944a 240 SUPERFAMILY SSF143422 3 127 2.22E-26 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RR42_RS05980 7be511fad2ecca4e851f39aabe326c82 211 PANTHER PTHR30328 6 211 6.2E-60 T 23-04-2016 RR42_RS05980 7be511fad2ecca4e851f39aabe326c82 211 SUPERFAMILY SSF46689 6 81 1.39E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS05980 7be511fad2ecca4e851f39aabe326c82 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 4.7E-14 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS05980 7be511fad2ecca4e851f39aabe326c82 211 SUPERFAMILY SSF48498 85 209 2.47E-37 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RR42_RS05980 7be511fad2ecca4e851f39aabe326c82 211 PANTHER PTHR30328:SF16 6 211 6.2E-60 T 23-04-2016 RR42_RS05980 7be511fad2ecca4e851f39aabe326c82 211 Gene3D G3DSA:1.10.357.10 65 206 1.8E-34 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS05980 7be511fad2ecca4e851f39aabe326c82 211 Gene3D G3DSA:1.10.10.60 5 64 2.1E-22 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS05980 7be511fad2ecca4e851f39aabe326c82 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 6.8E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS05980 7be511fad2ecca4e851f39aabe326c82 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 6.8E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS18315 da9b6c4a3cbf6d6c3deef0c2958b293d 213 Pfam PF01928 CYTH domain 3 204 4.5E-29 T 23-04-2016 IPR023577 CYTH domain RR42_RS18315 da9b6c4a3cbf6d6c3deef0c2958b293d 213 SUPERFAMILY SSF55154 1 210 1.31E-40 T 23-04-2016 IPR033469 CYTH-like domain RR42_RS18315 da9b6c4a3cbf6d6c3deef0c2958b293d 213 PANTHER PTHR39569 2 209 1.9E-41 T 23-04-2016 RR42_RS18315 da9b6c4a3cbf6d6c3deef0c2958b293d 213 Gene3D G3DSA:2.40.320.10 1 209 6.5E-32 T 23-04-2016 IPR023577 CYTH domain RR42_RS18315 da9b6c4a3cbf6d6c3deef0c2958b293d 213 SMART SM01118 2 210 8.5E-33 T 23-04-2016 IPR023577 CYTH domain RR42_RS18315 da9b6c4a3cbf6d6c3deef0c2958b293d 213 PANTHER PTHR39569:SF1 2 209 1.9E-41 T 23-04-2016 RR42_RS09790 9926357179d38343a02c1d41a6015af4 232 Pfam PF00005 ABC transporter 25 174 4.8E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS09790 9926357179d38343a02c1d41a6015af4 232 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS09790 9926357179d38343a02c1d41a6015af4 232 PANTHER PTHR24220:SF86 7 228 3.6E-80 T 23-04-2016 RR42_RS09790 9926357179d38343a02c1d41a6015af4 232 SMART SM00382 34 222 1.8E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS09790 9926357179d38343a02c1d41a6015af4 232 SUPERFAMILY SSF52540 6 226 1.13E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS09790 9926357179d38343a02c1d41a6015af4 232 Gene3D G3DSA:3.40.50.300 6 225 6.4E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS09790 9926357179d38343a02c1d41a6015af4 232 PANTHER PTHR24220 7 228 3.6E-80 T 23-04-2016 RR42_RS02240 87b720ade4ce222543682fd8ebe84f5c 391 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 9 387 5.0E-126 T 23-04-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 RR42_RS02240 87b720ade4ce222543682fd8ebe84f5c 391 PANTHER PTHR30536 9 391 1.5E-152 T 23-04-2016 RR42_RS13880 bd95b6b66b45675eb19f5737f2635aa7 660 Pfam PF00501 AMP-binding enzyme 95 535 2.1E-92 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS13880 bd95b6b66b45675eb19f5737f2635aa7 660 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 9 660 52.11 T 23-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 RR42_RS13880 bd95b6b66b45675eb19f5737f2635aa7 660 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 28 658 2.1E-296 T 23-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 RR42_RS13880 bd95b6b66b45675eb19f5737f2635aa7 660 PANTHER PTHR24095 8 656 1.4E-270 T 23-04-2016 RR42_RS13880 bd95b6b66b45675eb19f5737f2635aa7 660 Gene3D G3DSA:3.40.50.980 93 272 6.3E-40 T 23-04-2016 RR42_RS13880 bd95b6b66b45675eb19f5737f2635aa7 660 ProSitePatterns PS00455 Putative AMP-binding domain signature. 267 278 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS13880 bd95b6b66b45675eb19f5737f2635aa7 660 PANTHER PTHR24095:SF178 8 656 1.4E-270 T 23-04-2016 RR42_RS13880 bd95b6b66b45675eb19f5737f2635aa7 660 Gene3D G3DSA:2.30.38.10 450 529 1.3E-7 T 23-04-2016 RR42_RS13880 bd95b6b66b45675eb19f5737f2635aa7 660 Gene3D G3DSA:3.40.50.980 273 434 3.5E-28 T 23-04-2016 RR42_RS13880 bd95b6b66b45675eb19f5737f2635aa7 660 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 32 87 2.2E-21 T 23-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 RR42_RS13880 bd95b6b66b45675eb19f5737f2635aa7 660 Pfam PF13193 AMP-binding enzyme C-terminal domain 544 625 1.6E-27 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RR42_RS13880 bd95b6b66b45675eb19f5737f2635aa7 660 SUPERFAMILY SSF56801 14 657 1.19E-173 T 23-04-2016 RR42_RS13880 bd95b6b66b45675eb19f5737f2635aa7 660 Gene3D G3DSA:3.30.300.30 530 639 1.5E-27 T 23-04-2016 RR42_RS02505 31ac71666d40feddf7942c2f87e22201 595 Gene3D G3DSA:2.40.110.10 162 269 4.3E-27 T 23-04-2016 RR42_RS02505 31ac71666d40feddf7942c2f87e22201 595 PANTHER PTHR10909:SF154 3 374 6.7E-232 T 23-04-2016 RR42_RS02505 31ac71666d40feddf7942c2f87e22201 595 PANTHER PTHR10909:SF154 391 479 6.7E-232 T 23-04-2016 RR42_RS02505 31ac71666d40feddf7942c2f87e22201 595 SUPERFAMILY SSF56645 37 293 2.23E-59 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RR42_RS02505 31ac71666d40feddf7942c2f87e22201 595 Gene3D G3DSA:1.10.540.10 39 161 5.9E-19 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS02505 31ac71666d40feddf7942c2f87e22201 595 Gene3D G3DSA:1.20.140.10 270 465 2.3E-54 T 23-04-2016 RR42_RS02505 31ac71666d40feddf7942c2f87e22201 595 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 452 1.4E-20 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS02505 31ac71666d40feddf7942c2f87e22201 595 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 164 272 5.5E-18 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RR42_RS02505 31ac71666d40feddf7942c2f87e22201 595 PANTHER PTHR10909 3 374 6.7E-232 T 23-04-2016 RR42_RS02505 31ac71666d40feddf7942c2f87e22201 595 PANTHER PTHR10909 391 479 6.7E-232 T 23-04-2016 RR42_RS02505 31ac71666d40feddf7942c2f87e22201 595 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 35 3.5E-15 T 23-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria RR42_RS02505 31ac71666d40feddf7942c2f87e22201 595 SUPERFAMILY SSF47203 288 466 2.26E-52 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS02505 31ac71666d40feddf7942c2f87e22201 595 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 471 591 1.4E-34 T 23-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RR42_RS02505 31ac71666d40feddf7942c2f87e22201 595 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 159 2.9E-12 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS11600 aab42cc68bbfcbdb95d4cdd3c7aa7788 180 PANTHER PTHR30466 17 169 1.1E-29 T 23-04-2016 RR42_RS11600 aab42cc68bbfcbdb95d4cdd3c7aa7788 180 Pfam PF01613 Flavin reductase like domain 16 150 1.7E-19 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 RR42_RS11600 aab42cc68bbfcbdb95d4cdd3c7aa7788 180 Gene3D G3DSA:2.30.110.10 2 167 7.4E-41 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RR42_RS11600 aab42cc68bbfcbdb95d4cdd3c7aa7788 180 SUPERFAMILY SSF50475 5 165 1.34E-35 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RR42_RS11600 aab42cc68bbfcbdb95d4cdd3c7aa7788 180 PANTHER PTHR30466:SF6 17 169 1.1E-29 T 23-04-2016 RR42_RS11600 aab42cc68bbfcbdb95d4cdd3c7aa7788 180 SMART SM00903 13 153 1.0E-13 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 RR42_RS17575 c2044a0b0d67b192b84c2808242f31a7 659 SUPERFAMILY SSF52518 328 518 2.26E-66 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS17575 c2044a0b0d67b192b84c2808242f31a7 659 SMART SM00861 348 518 1.4E-67 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RR42_RS17575 c2044a0b0d67b192b84c2808242f31a7 659 SUPERFAMILY SSF52518 1 312 1.83E-119 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS17575 c2044a0b0d67b192b84c2808242f31a7 659 Gene3D G3DSA:3.40.50.970 320 524 1.5E-78 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS17575 c2044a0b0d67b192b84c2808242f31a7 659 PANTHER PTHR11624:SF1 1 303 0.0 T 23-04-2016 RR42_RS17575 c2044a0b0d67b192b84c2808242f31a7 659 PANTHER PTHR11624:SF1 334 657 0.0 T 23-04-2016 RR42_RS17575 c2044a0b0d67b192b84c2808242f31a7 659 SUPERFAMILY SSF52922 526 658 1.7E-42 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RR42_RS17575 c2044a0b0d67b192b84c2808242f31a7 659 Pfam PF02779 Transketolase, pyrimidine binding domain 347 517 8.7E-46 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RR42_RS17575 c2044a0b0d67b192b84c2808242f31a7 659 Gene3D G3DSA:3.40.50.970 1 312 2.6E-131 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS17575 c2044a0b0d67b192b84c2808242f31a7 659 TIGRFAM TIGR00232 tktlase_bact: transketolase 1 656 6.0E-289 T 23-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 RR42_RS17575 c2044a0b0d67b192b84c2808242f31a7 659 PANTHER PTHR11624 1 303 0.0 T 23-04-2016 IPR033247 Transketolase family RR42_RS17575 c2044a0b0d67b192b84c2808242f31a7 659 PANTHER PTHR11624 334 657 0.0 T 23-04-2016 IPR033247 Transketolase family RR42_RS17575 c2044a0b0d67b192b84c2808242f31a7 659 ProSitePatterns PS00801 Transketolase signature 1. 6 26 - T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RR42_RS17575 c2044a0b0d67b192b84c2808242f31a7 659 Pfam PF02780 Transketolase, C-terminal domain 546 649 2.8E-15 T 23-04-2016 IPR033248 Transketolase, C-terminal domain RR42_RS17575 c2044a0b0d67b192b84c2808242f31a7 659 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 1 327 3.8E-158 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RR42_RS17575 c2044a0b0d67b192b84c2808242f31a7 659 Gene3D G3DSA:3.40.50.920 531 655 2.9E-44 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RR42_RS11525 06c62b356240a030ccff7198cf87dc08 331 PANTHER PTHR30349 13 322 1.1E-77 T 23-04-2016 RR42_RS11525 06c62b356240a030ccff7198cf87dc08 331 Gene3D G3DSA:3.40.190.10 131 213 2.1E-4 T 23-04-2016 RR42_RS11525 06c62b356240a030ccff7198cf87dc08 331 PANTHER PTHR30349:SF16 13 322 1.1E-77 T 23-04-2016 RR42_RS11525 06c62b356240a030ccff7198cf87dc08 331 SUPERFAMILY SSF53850 36 280 4.98E-12 T 23-04-2016 RR42_RS11525 06c62b356240a030ccff7198cf87dc08 331 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 55 312 7.4E-69 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS11525 06c62b356240a030ccff7198cf87dc08 331 PIRSF PIRSF017082 1 326 5.1E-70 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS13355 eec6fb7694f8fc3566fb0b7de59353cd 468 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 6 465 1.6E-162 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RR42_RS13355 eec6fb7694f8fc3566fb0b7de59353cd 468 SUPERFAMILY SSF52374 6 303 7.24E-105 T 23-04-2016 RR42_RS13355 eec6fb7694f8fc3566fb0b7de59353cd 468 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS13355 eec6fb7694f8fc3566fb0b7de59353cd 468 PANTHER PTHR11451 4 320 4.0E-88 T 23-04-2016 RR42_RS13355 eec6fb7694f8fc3566fb0b7de59353cd 468 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 6 467 31.947 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RR42_RS13355 eec6fb7694f8fc3566fb0b7de59353cd 468 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 312 1.1E-94 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 RR42_RS13355 eec6fb7694f8fc3566fb0b7de59353cd 468 Gene3D G3DSA:1.10.1160.10 239 319 1.7E-33 T 23-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 RR42_RS13355 eec6fb7694f8fc3566fb0b7de59353cd 468 Gene3D G3DSA:3.90.800.10 71 187 7.2E-34 T 23-04-2016 RR42_RS13355 eec6fb7694f8fc3566fb0b7de59353cd 468 PANTHER PTHR11451:SF41 4 320 4.0E-88 T 23-04-2016 RR42_RS13355 eec6fb7694f8fc3566fb0b7de59353cd 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 186 196 2.2E-24 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RR42_RS13355 eec6fb7694f8fc3566fb0b7de59353cd 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 2.2E-24 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RR42_RS13355 eec6fb7694f8fc3566fb0b7de59353cd 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 2.2E-24 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RR42_RS13355 eec6fb7694f8fc3566fb0b7de59353cd 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 23 34 2.2E-24 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RR42_RS13355 eec6fb7694f8fc3566fb0b7de59353cd 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 202 210 2.2E-24 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RR42_RS13355 eec6fb7694f8fc3566fb0b7de59353cd 468 SUPERFAMILY SSF48163 306 465 3.92E-38 T 23-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RR42_RS13355 eec6fb7694f8fc3566fb0b7de59353cd 468 Gene3D G3DSA:1.10.10.350 370 466 2.1E-23 T 23-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RR42_RS13355 eec6fb7694f8fc3566fb0b7de59353cd 468 Gene3D G3DSA:3.40.50.620 6 70 2.3E-46 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS13355 eec6fb7694f8fc3566fb0b7de59353cd 468 Gene3D G3DSA:3.40.50.620 188 237 2.3E-46 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS01205 65d33f985cc62529c6722b34472feba2 134 Gene3D G3DSA:1.10.10.60 15 101 3.5E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS01205 65d33f985cc62529c6722b34472feba2 134 SUPERFAMILY SSF48295 6 55 5.23E-12 T 23-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RR42_RS01765 65d33f985cc62529c6722b34472feba2 134 Gene3D G3DSA:1.10.10.60 15 101 3.5E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS01765 65d33f985cc62529c6722b34472feba2 134 SUPERFAMILY SSF48295 6 55 5.23E-12 T 23-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RR42_RS05185 65d33f985cc62529c6722b34472feba2 134 Gene3D G3DSA:1.10.10.60 15 101 3.5E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS05185 65d33f985cc62529c6722b34472feba2 134 SUPERFAMILY SSF48295 6 55 5.23E-12 T 23-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RR42_RS16100 65d33f985cc62529c6722b34472feba2 134 Gene3D G3DSA:1.10.10.60 15 101 3.5E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS16100 65d33f985cc62529c6722b34472feba2 134 SUPERFAMILY SSF48295 6 55 5.23E-12 T 23-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RR42_RS08375 65d33f985cc62529c6722b34472feba2 134 Gene3D G3DSA:1.10.10.60 15 101 3.5E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS08375 65d33f985cc62529c6722b34472feba2 134 SUPERFAMILY SSF48295 6 55 5.23E-12 T 23-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RR42_RS06520 6a448c4eef1b4765306b888b42355122 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 6.0E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS06520 6a448c4eef1b4765306b888b42355122 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 6.0E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS06520 6a448c4eef1b4765306b888b42355122 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 157 6.0E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS06520 6a448c4eef1b4765306b888b42355122 261 PANTHER PTHR24322 169 201 7.5E-57 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS06520 6a448c4eef1b4765306b888b42355122 261 PANTHER PTHR24322 14 138 7.5E-57 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS06520 6a448c4eef1b4765306b888b42355122 261 SUPERFAMILY SSF51735 5 260 3.66E-80 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS06520 6a448c4eef1b4765306b888b42355122 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 260 5.6E-60 T 23-04-2016 RR42_RS06520 6a448c4eef1b4765306b888b42355122 261 Gene3D G3DSA:3.40.50.720 6 261 2.1E-86 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS06520 6a448c4eef1b4765306b888b42355122 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 156 184 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RR42_RS06520 6a448c4eef1b4765306b888b42355122 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 207 5.6E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS06520 6a448c4eef1b4765306b888b42355122 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 5.6E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS06520 6a448c4eef1b4765306b888b42355122 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 5.6E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS06520 6a448c4eef1b4765306b888b42355122 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 159 5.6E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS06520 6a448c4eef1b4765306b888b42355122 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 5.6E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS06520 6a448c4eef1b4765306b888b42355122 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 188 5.6E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS06520 6a448c4eef1b4765306b888b42355122 261 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 214 0.0064 T 23-04-2016 RR42_RS11995 f709eba522ab69a9e614de0f7ba11daf 629 Pfam PF00005 ABC transporter 346 495 2.8E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS11995 f709eba522ab69a9e614de0f7ba11daf 629 Pfam PF00005 ABC transporter 38 201 1.7E-24 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS11995 f709eba522ab69a9e614de0f7ba11daf 629 PANTHER PTHR24220 19 317 6.8E-196 T 23-04-2016 RR42_RS11995 f709eba522ab69a9e614de0f7ba11daf 629 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 546 596 4.0E-10 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RR42_RS11995 f709eba522ab69a9e614de0f7ba11daf 629 Gene3D G3DSA:3.40.50.300 17 275 3.9E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11995 f709eba522ab69a9e614de0f7ba11daf 629 Gene3D G3DSA:3.40.50.300 317 570 3.7E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11995 f709eba522ab69a9e614de0f7ba11daf 629 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 548 593 1.8E-9 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RR42_RS11995 f709eba522ab69a9e614de0f7ba11daf 629 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 253 285 1.2E-7 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RR42_RS11995 f709eba522ab69a9e614de0f7ba11daf 629 PANTHER PTHR24220:SF442 345 455 6.8E-196 T 23-04-2016 RR42_RS11995 f709eba522ab69a9e614de0f7ba11daf 629 PANTHER PTHR24220:SF442 19 317 6.8E-196 T 23-04-2016 RR42_RS11995 f709eba522ab69a9e614de0f7ba11daf 629 PANTHER PTHR24220 345 455 6.8E-196 T 23-04-2016 RR42_RS11995 f709eba522ab69a9e614de0f7ba11daf 629 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS11995 f709eba522ab69a9e614de0f7ba11daf 629 SUPERFAMILY SSF52540 318 568 1.17E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11995 f709eba522ab69a9e614de0f7ba11daf 629 SUPERFAMILY SSF52540 18 273 3.29E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11995 f709eba522ab69a9e614de0f7ba11daf 629 SMART SM00382 46 251 4.5E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS11995 f709eba522ab69a9e614de0f7ba11daf 629 SMART SM00382 354 546 8.3E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS11995 f709eba522ab69a9e614de0f7ba11daf 629 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS18535 46ab718e6b0de95bdd95bc9f4dbe2746 325 PIRSF PIRSF017082 3 325 6.6E-72 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS18535 46ab718e6b0de95bdd95bc9f4dbe2746 325 PANTHER PTHR30349:SF1 22 291 3.1E-79 T 23-04-2016 RR42_RS18535 46ab718e6b0de95bdd95bc9f4dbe2746 325 PANTHER PTHR30349 22 291 3.1E-79 T 23-04-2016 RR42_RS18535 46ab718e6b0de95bdd95bc9f4dbe2746 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 321 6.8E-83 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS18535 46ab718e6b0de95bdd95bc9f4dbe2746 325 SUPERFAMILY SSF53850 120 284 9.96E-11 T 23-04-2016 RR42_RS13445 6c2594ebcd49dfd26a13e0460db2267d 235 SUPERFAMILY SSF52172 3 126 9.39E-43 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS13445 6c2594ebcd49dfd26a13e0460db2267d 235 SMART SM00862 152 229 1.1E-27 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS13445 6c2594ebcd49dfd26a13e0460db2267d 235 Gene3D G3DSA:3.40.50.2300 3 125 9.0E-41 T 23-04-2016 RR42_RS13445 6c2594ebcd49dfd26a13e0460db2267d 235 PANTHER PTHR26402:SF576 3 231 2.0E-112 T 23-04-2016 RR42_RS13445 6c2594ebcd49dfd26a13e0460db2267d 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 229 1.5E-26 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS13445 6c2594ebcd49dfd26a13e0460db2267d 235 Pfam PF00072 Response regulator receiver domain 5 117 7.3E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS13445 6c2594ebcd49dfd26a13e0460db2267d 235 SUPERFAMILY SSF46894 124 229 1.79E-28 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS13445 6c2594ebcd49dfd26a13e0460db2267d 235 PANTHER PTHR26402 3 231 2.0E-112 T 23-04-2016 RR42_RS13445 6c2594ebcd49dfd26a13e0460db2267d 235 Gene3D G3DSA:1.10.10.10 129 230 1.3E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS13445 6c2594ebcd49dfd26a13e0460db2267d 235 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 2 229 1.6E-104 T 23-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 RR42_RS13445 6c2594ebcd49dfd26a13e0460db2267d 235 SMART SM00448 3 116 2.6E-40 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS04350 92bd1650a221c9889d7116a13f2c305b 363 PANTHER PTHR24220:SF282 20 258 6.1E-123 T 23-04-2016 RR42_RS04350 92bd1650a221c9889d7116a13f2c305b 363 PANTHER PTHR24220 20 258 6.1E-123 T 23-04-2016 RR42_RS04350 92bd1650a221c9889d7116a13f2c305b 363 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS04350 92bd1650a221c9889d7116a13f2c305b 363 SMART SM00382 43 230 1.2E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS04350 92bd1650a221c9889d7116a13f2c305b 363 Gene3D G3DSA:3.40.50.300 11 249 5.9E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04350 92bd1650a221c9889d7116a13f2c305b 363 Pfam PF00005 ABC transporter 35 178 4.1E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS04350 92bd1650a221c9889d7116a13f2c305b 363 Pfam PF08402 TOBE domain 291 360 6.3E-10 T 23-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 RR42_RS04350 92bd1650a221c9889d7116a13f2c305b 363 SUPERFAMILY SSF52540 18 253 1.16E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04350 92bd1650a221c9889d7116a13f2c305b 363 SUPERFAMILY SSF50331 280 360 1.23E-12 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RR42_RS11820 a4c6b4a4a7817cc394d8ffc4c20dfe48 149 Pfam PF07977 FabA-like domain 15 140 1.5E-36 T 23-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RR42_RS11820 a4c6b4a4a7817cc394d8ffc4c20dfe48 149 PANTHER PTHR30272 6 149 5.9E-75 T 23-04-2016 RR42_RS11820 a4c6b4a4a7817cc394d8ffc4c20dfe48 149 SUPERFAMILY SSF54637 8 145 1.57E-48 T 23-04-2016 IPR029069 HotDog domain RR42_RS11820 a4c6b4a4a7817cc394d8ffc4c20dfe48 149 Gene3D G3DSA:3.10.129.10 5 146 3.4E-58 T 23-04-2016 IPR029069 HotDog domain RR42_RS11820 a4c6b4a4a7817cc394d8ffc4c20dfe48 149 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 6 147 35.458 T 23-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RR42_RS11820 a4c6b4a4a7817cc394d8ffc4c20dfe48 149 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 6 144 4.1E-60 T 23-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RR42_RS19340 66f5647a5a3a876fe1b67a70d109aa0f 143 SUPERFAMILY SSF54747 3 72 5.63E-30 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal RR42_RS19340 66f5647a5a3a876fe1b67a70d109aa0f 143 SUPERFAMILY SSF46906 68 141 1.96E-25 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RR42_RS19340 66f5647a5a3a876fe1b67a70d109aa0f 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.177 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 RR42_RS19340 66f5647a5a3a876fe1b67a70d109aa0f 143 Gene3D G3DSA:1.10.10.250 73 141 3.1E-30 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RR42_RS19340 66f5647a5a3a876fe1b67a70d109aa0f 143 Gene3D G3DSA:3.30.1550.10 2 72 9.6E-37 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal RR42_RS19340 66f5647a5a3a876fe1b67a70d109aa0f 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 9.7E-24 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RR42_RS19340 66f5647a5a3a876fe1b67a70d109aa0f 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.1E-28 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal RR42_RS19340 66f5647a5a3a876fe1b67a70d109aa0f 143 SMART SM00649 9 141 4.1E-84 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 RR42_RS19340 66f5647a5a3a876fe1b67a70d109aa0f 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 3.8E-64 T 23-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 RR42_RS19340 66f5647a5a3a876fe1b67a70d109aa0f 143 PANTHER PTHR11661 1 142 2.1E-69 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 RR42_RS19340 66f5647a5a3a876fe1b67a70d109aa0f 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-16 T 23-04-2016 RR42_RS19340 66f5647a5a3a876fe1b67a70d109aa0f 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 23-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 RR42_RS14775 d1686d84ac8bc1fa02a898858351e8da 415 Gene3D G3DSA:3.30.2010.10 199 291 2.0E-21 T 23-04-2016 RR42_RS14775 d1686d84ac8bc1fa02a898858351e8da 415 PANTHER PTHR10120 3 411 4.1E-107 T 23-04-2016 RR42_RS14775 d1686d84ac8bc1fa02a898858351e8da 415 Pfam PF01435 Peptidase family M48 206 412 1.8E-39 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RR42_RS14775 d1686d84ac8bc1fa02a898858351e8da 415 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 24 202 6.2E-53 T 23-04-2016 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 RR42_RS14775 d1686d84ac8bc1fa02a898858351e8da 415 PANTHER PTHR10120:SF24 3 411 4.1E-107 T 23-04-2016 IPR027057 CAAX prenyl protease 1 GO:0008233|GO:0071586 KEGG: 00900+3.4.24.84 RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 Gene3D G3DSA:1.10.287.380 887 953 6.4E-5 T 23-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 Gene3D G3DSA:3.40.50.620 10 199 7.0E-140 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 Gene3D G3DSA:3.40.50.620 604 625 7.0E-140 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 Gene3D G3DSA:3.40.50.620 352 566 7.0E-140 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 Hamap MF_02004 Valine--tRNA ligase [valS]. 8 954 15.464 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 SUPERFAMILY SSF50677 198 352 6.54E-59 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 TIGRFAM TIGR00422 valS: valine--tRNA ligase 9 935 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 Gene3D G3DSA:3.90.740.10 200 349 1.2E-47 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 Gene3D G3DSA:1.10.730.10 626 823 6.4E-61 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 SUPERFAMILY SSF46589 889 953 1.67E-16 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 SUPERFAMILY SSF52374 8 198 8.97E-134 T 23-04-2016 RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 SUPERFAMILY SSF52374 604 636 8.97E-134 T 23-04-2016 RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 SUPERFAMILY SSF52374 352 566 8.97E-134 T 23-04-2016 RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 PANTHER PTHR11946:SF5 885 948 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 PANTHER PTHR11946:SF5 1 565 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 PANTHER PTHR11946:SF5 603 863 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 PANTHER PTHR11946 885 948 0.0 T 23-04-2016 RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 PANTHER PTHR11946 1 565 0.0 T 23-04-2016 RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 PANTHER PTHR11946 603 863 0.0 T 23-04-2016 RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 Pfam PF08264 Anticodon-binding domain of tRNA 677 830 8.2E-41 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 889 953 1.9E-19 T 23-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 PRINTS PR00986 Valyl-tRNA synthetase signature 357 370 1.0E-34 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 PRINTS PR00986 Valyl-tRNA synthetase signature 241 258 1.0E-34 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 PRINTS PR00986 Valyl-tRNA synthetase signature 42 53 1.0E-34 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 PRINTS PR00986 Valyl-tRNA synthetase signature 501 519 1.0E-34 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 PRINTS PR00986 Valyl-tRNA synthetase signature 470 491 1.0E-34 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 49 60 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 24 626 2.9E-198 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS15095 3f1c9b6b1fee3463c83f4346b938e87a 955 SUPERFAMILY SSF47323 637 903 2.99E-60 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS02665 cefd210dca9e1cc31e0d39a381f7f0bf 459 Gene3D G3DSA:2.70.70.10 278 419 2.7E-48 T 23-04-2016 RR42_RS02665 cefd210dca9e1cc31e0d39a381f7f0bf 459 Pfam PF01551 Peptidase family M23 321 416 5.2E-34 T 23-04-2016 IPR016047 Peptidase M23 RR42_RS02665 cefd210dca9e1cc31e0d39a381f7f0bf 459 PANTHER PTHR21666 1 435 9.1E-47 T 23-04-2016 RR42_RS02665 cefd210dca9e1cc31e0d39a381f7f0bf 459 SUPERFAMILY SSF51261 199 417 2.98E-66 T 23-04-2016 IPR011055 Duplicated hybrid motif RR42_RS02665 cefd210dca9e1cc31e0d39a381f7f0bf 459 PANTHER PTHR21666:SF221 1 435 9.1E-47 T 23-04-2016 RR42_RS09335 feb22a35d2806f0218900e162e166329 791 Gene3D G3DSA:3.30.420.10 154 371 3.0E-34 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS09335 feb22a35d2806f0218900e162e166329 791 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 421 434 7.2E-10 T 23-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS09335 feb22a35d2806f0218900e162e166329 791 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 495 507 7.2E-10 T 23-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS09335 feb22a35d2806f0218900e162e166329 791 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 547 555 7.2E-10 T 23-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS09335 feb22a35d2806f0218900e162e166329 791 SUPERFAMILY SSF56672 390 787 6.12E-114 T 23-04-2016 RR42_RS09335 feb22a35d2806f0218900e162e166329 791 PANTHER PTHR10322 67 777 3.9E-202 T 23-04-2016 RR42_RS09335 feb22a35d2806f0218900e162e166329 791 Pfam PF03104 DNA polymerase family B, exonuclease domain 209 302 1.8E-6 T 23-04-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS09335 feb22a35d2806f0218900e162e166329 791 Gene3D G3DSA:3.90.1600.10 404 437 1.4E-10 T 23-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS09335 feb22a35d2806f0218900e162e166329 791 Gene3D G3DSA:3.90.1600.10 518 573 1.4E-10 T 23-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS09335 feb22a35d2806f0218900e162e166329 791 SUPERFAMILY SSF53098 5 395 4.96E-93 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS09335 feb22a35d2806f0218900e162e166329 791 SMART SM00486 154 561 6.4E-64 T 23-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS09335 feb22a35d2806f0218900e162e166329 791 ProSitePatterns PS00116 DNA polymerase family B signature. 549 557 - T 23-04-2016 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS09335 feb22a35d2806f0218900e162e166329 791 Pfam PF00136 DNA polymerase family B 384 743 6.3E-40 T 23-04-2016 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS16230 391555aee358ae0749e1c2287d25caf0 374 PANTHER PTHR33529 1 352 1.7E-57 T 23-04-2016 RR42_RS16230 391555aee358ae0749e1c2287d25caf0 374 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 347 7.4E-116 T 23-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 RR42_RS16230 391555aee358ae0749e1c2287d25caf0 374 PANTHER PTHR33529:SF2 1 352 1.7E-57 T 23-04-2016 RR42_RS16230 391555aee358ae0749e1c2287d25caf0 374 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 346 6.9E-57 T 23-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 RR42_RS20490 1591aeea448eff6bf8b7cbfc968fc3f1 904 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 331 - T 23-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 RR42_RS20490 1591aeea448eff6bf8b7cbfc968fc3f1 904 Pfam PF01131 DNA topoisomerase 156 595 4.0E-119 T 23-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RR42_RS20490 1591aeea448eff6bf8b7cbfc968fc3f1 904 Pfam PF13342 C-terminal repeat of topoisomerase 647 709 3.1E-20 T 23-04-2016 IPR025589 Topoisomerase C-terminal repeat RR42_RS20490 1591aeea448eff6bf8b7cbfc968fc3f1 904 Pfam PF13342 C-terminal repeat of topoisomerase 756 816 1.4E-17 T 23-04-2016 IPR025589 Topoisomerase C-terminal repeat RR42_RS20490 1591aeea448eff6bf8b7cbfc968fc3f1 904 SMART SM00437 279 557 5.1E-73 T 23-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 RR42_RS20490 1591aeea448eff6bf8b7cbfc968fc3f1 904 TIGRFAM TIGR01056 topB: DNA topoisomerase III 3 619 5.1E-173 T 23-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 RR42_RS20490 1591aeea448eff6bf8b7cbfc968fc3f1 904 SMART SM00493 3 126 8.1E-13 T 23-04-2016 IPR006171 Toprim domain RR42_RS20490 1591aeea448eff6bf8b7cbfc968fc3f1 904 SUPERFAMILY SSF56712 3 610 5.36E-172 T 23-04-2016 IPR023405 DNA topoisomerase, type IA, core domain RR42_RS20490 1591aeea448eff6bf8b7cbfc968fc3f1 904 Gene3D G3DSA:2.70.20.10 215 341 7.9E-24 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RR42_RS20490 1591aeea448eff6bf8b7cbfc968fc3f1 904 Gene3D G3DSA:2.70.20.10 370 479 1.3E-16 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RR42_RS20490 1591aeea448eff6bf8b7cbfc968fc3f1 904 PANTHER PTHR11390 1 503 2.5E-153 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RR42_RS20490 1591aeea448eff6bf8b7cbfc968fc3f1 904 PANTHER PTHR11390 520 632 2.5E-153 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RR42_RS20490 1591aeea448eff6bf8b7cbfc968fc3f1 904 Gene3D G3DSA:1.10.460.10 490 611 5.6E-53 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RR42_RS20490 1591aeea448eff6bf8b7cbfc968fc3f1 904 Gene3D G3DSA:1.10.460.10 156 214 5.6E-53 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RR42_RS20490 1591aeea448eff6bf8b7cbfc968fc3f1 904 Pfam PF01751 Toprim domain 5 131 7.1E-10 T 23-04-2016 IPR006171 Toprim domain RR42_RS20490 1591aeea448eff6bf8b7cbfc968fc3f1 904 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 322 331 5.1E-27 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RR42_RS20490 1591aeea448eff6bf8b7cbfc968fc3f1 904 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 405 421 5.1E-27 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RR42_RS20490 1591aeea448eff6bf8b7cbfc968fc3f1 904 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 5.1E-27 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RR42_RS20490 1591aeea448eff6bf8b7cbfc968fc3f1 904 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 520 534 5.1E-27 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RR42_RS20490 1591aeea448eff6bf8b7cbfc968fc3f1 904 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 5.1E-27 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RR42_RS20490 1591aeea448eff6bf8b7cbfc968fc3f1 904 SMART SM00436 126 221 1.2E-23 T 23-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 RR42_RS20490 1591aeea448eff6bf8b7cbfc968fc3f1 904 Gene3D G3DSA:3.40.50.140 4 149 1.1E-41 T 23-04-2016 IPR006171 Toprim domain RR42_RS14720 7a502ad8337bece2359ea12a6dd26793 646 Gene3D G3DSA:3.40.50.300 290 446 3.2E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14720 7a502ad8337bece2359ea12a6dd26793 646 Pfam PF00271 Helicase conserved C-terminal domain 314 418 4.9E-28 T 23-04-2016 IPR001650 Helicase, C-terminal RR42_RS14720 7a502ad8337bece2359ea12a6dd26793 646 Gene3D G3DSA:3.40.50.300 59 289 3.9E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14720 7a502ad8337bece2359ea12a6dd26793 646 PANTHER PTHR24031:SF261 61 134 1.6E-177 T 23-04-2016 RR42_RS14720 7a502ad8337bece2359ea12a6dd26793 646 PANTHER PTHR24031:SF261 151 531 1.6E-177 T 23-04-2016 RR42_RS14720 7a502ad8337bece2359ea12a6dd26793 646 SUPERFAMILY SSF52540 154 439 5.5E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14720 7a502ad8337bece2359ea12a6dd26793 646 PANTHER PTHR24031 61 134 1.6E-177 T 23-04-2016 RR42_RS14720 7a502ad8337bece2359ea12a6dd26793 646 PANTHER PTHR24031 151 531 1.6E-177 T 23-04-2016 RR42_RS14720 7a502ad8337bece2359ea12a6dd26793 646 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 231 239 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RR42_RS14720 7a502ad8337bece2359ea12a6dd26793 646 SMART SM00487 79 300 1.3E-56 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RR42_RS14720 7a502ad8337bece2359ea12a6dd26793 646 Pfam PF00270 DEAD/DEAH box helicase 84 269 3.8E-48 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RR42_RS14720 7a502ad8337bece2359ea12a6dd26793 646 SMART SM00490 337 418 3.1E-33 T 23-04-2016 IPR001650 Helicase, C-terminal RR42_RS08065 f16a1f95de105bf2b3ab91a67dcdedeb 56 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 1 45 9.1E-12 T 23-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) RR42_RS04360 acf792d18f1c5db87f0d1783b77b3e63 437 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 432 39.186 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RR42_RS04360 acf792d18f1c5db87f0d1783b77b3e63 437 SUPERFAMILY SSF46589 1 112 6.28E-32 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 RR42_RS04360 acf792d18f1c5db87f0d1783b77b3e63 437 PIRSF PIRSF001529 1 436 5.1E-175 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RR42_RS04360 acf792d18f1c5db87f0d1783b77b3e63 437 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 427 1.9E-159 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RR42_RS04360 acf792d18f1c5db87f0d1783b77b3e63 437 Gene3D G3DSA:1.10.287.40 1 104 7.6E-29 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 RR42_RS04360 acf792d18f1c5db87f0d1783b77b3e63 437 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 234 410 1.6E-32 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS04360 acf792d18f1c5db87f0d1783b77b3e63 437 SUPERFAMILY SSF55681 116 428 5.53E-100 T 23-04-2016 RR42_RS04360 acf792d18f1c5db87f0d1783b77b3e63 437 Gene3D G3DSA:3.30.930.10 105 430 2.3E-137 T 23-04-2016 RR42_RS04360 acf792d18f1c5db87f0d1783b77b3e63 437 PANTHER PTHR11778 1 435 7.2E-208 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RR42_RS04360 acf792d18f1c5db87f0d1783b77b3e63 437 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 7.4E-34 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 RR42_RS04360 acf792d18f1c5db87f0d1783b77b3e63 437 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 5.6E-32 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RR42_RS04360 acf792d18f1c5db87f0d1783b77b3e63 437 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 5.6E-32 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RR42_RS04360 acf792d18f1c5db87f0d1783b77b3e63 437 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 5.6E-32 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RR42_RS04360 acf792d18f1c5db87f0d1783b77b3e63 437 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 5.6E-32 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RR42_RS04360 acf792d18f1c5db87f0d1783b77b3e63 437 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 5.6E-32 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RR42_RS10730 2c33b08c0df9b660d7a160249656be5c 466 PANTHER PTHR30354 1 466 3.0E-221 T 23-04-2016 RR42_RS10730 2c33b08c0df9b660d7a160249656be5c 466 PANTHER PTHR30354:SF7 1 466 3.0E-221 T 23-04-2016 RR42_RS10610 c3c23022605fb3fde74063eaba931ded 366 SUPERFAMILY SSF47413 2 60 2.82E-14 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS10610 c3c23022605fb3fde74063eaba931ded 366 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RR42_RS10610 c3c23022605fb3fde74063eaba931ded 366 PANTHER PTHR30146 2 350 1.3E-85 T 23-04-2016 RR42_RS10610 c3c23022605fb3fde74063eaba931ded 366 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.2E-5 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RR42_RS10610 c3c23022605fb3fde74063eaba931ded 366 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.2E-5 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RR42_RS10610 c3c23022605fb3fde74063eaba931ded 366 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 2.0E-15 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RR42_RS10610 c3c23022605fb3fde74063eaba931ded 366 Gene3D G3DSA:3.40.50.2300 174 347 4.4E-40 T 23-04-2016 RR42_RS10610 c3c23022605fb3fde74063eaba931ded 366 SUPERFAMILY SSF53822 63 350 1.51E-53 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RR42_RS10610 c3c23022605fb3fde74063eaba931ded 366 Gene3D G3DSA:3.40.50.2300 56 173 7.0E-35 T 23-04-2016 RR42_RS10610 c3c23022605fb3fde74063eaba931ded 366 SMART SM00354 1 72 2.4E-26 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RR42_RS10610 c3c23022605fb3fde74063eaba931ded 366 Pfam PF13377 Periplasmic binding protein-like domain 173 345 2.4E-31 T 23-04-2016 RR42_RS10610 c3c23022605fb3fde74063eaba931ded 366 Gene3D G3DSA:1.10.260.40 2 55 2.1E-22 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS06365 02403d2b34a1fdf356d4edaed0b08787 444 SUPERFAMILY SSF52402 1 214 5.12E-54 T 23-04-2016 RR42_RS06365 02403d2b34a1fdf356d4edaed0b08787 444 Pfam PF01171 PP-loop family 1 183 5.1E-54 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal RR42_RS06365 02403d2b34a1fdf356d4edaed0b08787 444 PANTHER PTHR11807 1 432 2.4E-72 T 23-04-2016 RR42_RS06365 02403d2b34a1fdf356d4edaed0b08787 444 SUPERFAMILY SSF56037 314 429 1.86E-25 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RR42_RS06365 02403d2b34a1fdf356d4edaed0b08787 444 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 1 184 1.1E-51 T 23-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RR42_RS06365 02403d2b34a1fdf356d4edaed0b08787 444 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 1 296 20.315 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RR42_RS06365 02403d2b34a1fdf356d4edaed0b08787 444 SUPERFAMILY SSF82829 236 303 1.23E-11 T 23-04-2016 RR42_RS06365 02403d2b34a1fdf356d4edaed0b08787 444 Pfam PF09179 TilS substrate binding domain 237 302 2.3E-13 T 23-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RR42_RS06365 02403d2b34a1fdf356d4edaed0b08787 444 SMART SM00977 354 427 9.0E-19 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RR42_RS06365 02403d2b34a1fdf356d4edaed0b08787 444 Pfam PF11734 TilS substrate C-terminal domain 354 427 1.2E-20 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RR42_RS06365 02403d2b34a1fdf356d4edaed0b08787 444 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 354 400 4.6E-12 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RR42_RS06365 02403d2b34a1fdf356d4edaed0b08787 444 Gene3D G3DSA:3.40.50.620 1 165 9.8E-13 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS06365 02403d2b34a1fdf356d4edaed0b08787 444 PANTHER PTHR11807:SF2 1 432 2.4E-72 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RR42_RS05755 a77811d1f0c505ffb0a55e37cec4834d 259 Gene3D G3DSA:3.90.226.10 5 259 6.7E-75 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS05755 a77811d1f0c505ffb0a55e37cec4834d 259 SUPERFAMILY SSF52096 4 259 5.57E-77 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS05755 a77811d1f0c505ffb0a55e37cec4834d 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 258 2.0E-57 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RR42_RS05755 a77811d1f0c505ffb0a55e37cec4834d 259 PANTHER PTHR11941 8 258 6.1E-81 T 23-04-2016 RR42_RS05755 a77811d1f0c505ffb0a55e37cec4834d 259 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 23-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RR42_RS03430 333f4662ce8be34d230c70dd38398edd 252 PANTHER PTHR10108 7 246 4.0E-72 T 23-04-2016 RR42_RS03430 333f4662ce8be34d230c70dd38398edd 252 Gene3D G3DSA:3.40.50.150 31 233 1.1E-47 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS03430 333f4662ce8be34d230c70dd38398edd 252 PANTHER PTHR10108:SF835 7 246 4.0E-72 T 23-04-2016 RR42_RS03430 333f4662ce8be34d230c70dd38398edd 252 Pfam PF08241 Methyltransferase domain 46 141 9.0E-26 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RR42_RS03430 333f4662ce8be34d230c70dd38398edd 252 SUPERFAMILY SSF53335 11 233 5.11E-47 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS05680 2c0b3d1699a59f6339ca33566ac1a180 211 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 145 24.057 T 23-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 RR42_RS05680 2c0b3d1699a59f6339ca33566ac1a180 211 SUPERFAMILY SSF69737 77 144 7.06E-21 T 23-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 RR42_RS05680 2c0b3d1699a59f6339ca33566ac1a180 211 PIRSF PIRSF036402 1 203 4.5E-45 T 23-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 RR42_RS05680 2c0b3d1699a59f6339ca33566ac1a180 211 Gene3D G3DSA:2.60.260.20 24 77 6.6E-18 T 23-04-2016 RR42_RS05680 2c0b3d1699a59f6339ca33566ac1a180 211 Pfam PF02814 UreE urease accessory protein, N-terminal domain 20 71 2.5E-18 T 23-04-2016 IPR004029 UreE urease accessory, N-terminal RR42_RS05680 2c0b3d1699a59f6339ca33566ac1a180 211 Pfam PF05194 UreE urease accessory protein, C-terminal domain 78 184 7.0E-17 T 23-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 RR42_RS05680 2c0b3d1699a59f6339ca33566ac1a180 211 SUPERFAMILY SSF69287 19 77 1.44E-16 T 23-04-2016 IPR004029 UreE urease accessory, N-terminal RR42_RS05680 2c0b3d1699a59f6339ca33566ac1a180 211 Gene3D G3DSA:3.30.70.790 78 149 1.2E-30 T 23-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 RR42_RS05680 2c0b3d1699a59f6339ca33566ac1a180 211 SMART SM00988 7 71 1.4E-21 T 23-04-2016 IPR004029 UreE urease accessory, N-terminal RR42_RS00970 6f65496d50a42e95787a60220ced7b73 229 PANTHER PTHR13887 4 195 1.3E-19 T 23-04-2016 RR42_RS00970 6f65496d50a42e95787a60220ced7b73 229 Gene3D G3DSA:3.40.30.10 4 193 4.3E-40 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS00970 6f65496d50a42e95787a60220ced7b73 229 SUPERFAMILY SSF52833 3 195 3.23E-28 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS00970 6f65496d50a42e95787a60220ced7b73 229 PIRSF PIRSF006386 1 203 7.5E-36 T 23-04-2016 IPR014440 HCCA isomerase/glutathione S-transferase kappa RR42_RS00970 6f65496d50a42e95787a60220ced7b73 229 Pfam PF01323 DSBA-like thioredoxin domain 5 193 3.0E-30 T 23-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 RR42_RS01985 0f987d0816b0fffd22cf70e93777dbf1 453 PANTHER PTHR11851 31 450 1.3E-72 T 23-04-2016 RR42_RS01985 0f987d0816b0fffd22cf70e93777dbf1 453 SUPERFAMILY SSF63411 36 262 1.17E-36 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RR42_RS01985 0f987d0816b0fffd22cf70e93777dbf1 453 Pfam PF05193 Peptidase M16 inactive domain 208 385 1.1E-30 T 23-04-2016 IPR007863 Peptidase M16, C-terminal RR42_RS01985 0f987d0816b0fffd22cf70e93777dbf1 453 Gene3D G3DSA:3.30.830.10 39 253 1.5E-32 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 RR42_RS01985 0f987d0816b0fffd22cf70e93777dbf1 453 PANTHER PTHR11851:SF140 31 450 1.3E-72 T 23-04-2016 RR42_RS01985 0f987d0816b0fffd22cf70e93777dbf1 453 Gene3D G3DSA:3.30.830.10 275 450 6.2E-32 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 RR42_RS01985 0f987d0816b0fffd22cf70e93777dbf1 453 SUPERFAMILY SSF63411 272 452 8.5E-45 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RR42_RS04000 2eb566ac27ce365ed7340a89dc3560b0 152 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 54 5.9E-9 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS04000 2eb566ac27ce365ed7340a89dc3560b0 152 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RR42_RS04000 2eb566ac27ce365ed7340a89dc3560b0 152 PANTHER PTHR11908 1 140 5.0E-31 T 23-04-2016 RR42_RS04000 2eb566ac27ce365ed7340a89dc3560b0 152 SUPERFAMILY SSF47741 83 150 5.5E-29 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RR42_RS04000 2eb566ac27ce365ed7340a89dc3560b0 152 PANTHER PTHR11908:SF82 1 140 5.0E-31 T 23-04-2016 RR42_RS04000 2eb566ac27ce365ed7340a89dc3560b0 152 Gene3D G3DSA:1.10.150.120 74 150 1.9E-29 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RR42_RS04000 2eb566ac27ce365ed7340a89dc3560b0 152 Pfam PF01799 [2Fe-2S] binding domain 72 145 3.3E-25 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RR42_RS04000 2eb566ac27ce365ed7340a89dc3560b0 152 SUPERFAMILY SSF54292 3 76 2.88E-26 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS04000 2eb566ac27ce365ed7340a89dc3560b0 152 Gene3D G3DSA:3.10.20.30 2 73 9.1E-30 T 23-04-2016 IPR012675 Beta-grasp domain RR42_RS14290 61a60ec85a8b62ceaa949c1fc2303841 177 PANTHER PTHR12418:SF25 36 175 4.7E-57 T 23-04-2016 RR42_RS14290 61a60ec85a8b62ceaa949c1fc2303841 177 Pfam PF03061 Thioesterase superfamily 85 162 7.4E-12 T 23-04-2016 IPR006683 Thioesterase domain RR42_RS14290 61a60ec85a8b62ceaa949c1fc2303841 177 SUPERFAMILY SSF54637 4 170 8.78E-37 T 23-04-2016 IPR029069 HotDog domain RR42_RS14290 61a60ec85a8b62ceaa949c1fc2303841 177 PANTHER PTHR12418 36 175 4.7E-57 T 23-04-2016 RR42_RS14290 61a60ec85a8b62ceaa949c1fc2303841 177 Gene3D G3DSA:3.10.129.10 37 172 1.3E-49 T 23-04-2016 IPR029069 HotDog domain RR42_RS14290 61a60ec85a8b62ceaa949c1fc2303841 177 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 68 170 2.7E-25 T 23-04-2016 IPR003736 Phenylacetic acid degradation-related domain RR42_RS11145 d26697266a8391072e2832030ca798b0 315 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 277 8.8E-33 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RR42_RS11145 d26697266a8391072e2832030ca798b0 315 PANTHER PTHR11795:SF379 8 261 6.7E-68 T 23-04-2016 RR42_RS11145 d26697266a8391072e2832030ca798b0 315 PANTHER PTHR11795:SF379 289 313 6.7E-68 T 23-04-2016 RR42_RS11145 d26697266a8391072e2832030ca798b0 315 PANTHER PTHR11795 8 261 6.7E-68 T 23-04-2016 RR42_RS11145 d26697266a8391072e2832030ca798b0 315 PANTHER PTHR11795 289 313 6.7E-68 T 23-04-2016 RR42_RS02600 b937c4d315c1b17e27c406adb926ab29 362 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 23-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RR42_RS02600 b937c4d315c1b17e27c406adb926ab29 362 PANTHER PTHR11835:SF37 4 362 2.7E-219 T 23-04-2016 RR42_RS02600 b937c4d315c1b17e27c406adb926ab29 362 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 1 362 7.6E-173 T 23-04-2016 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 RR42_RS02600 b937c4d315c1b17e27c406adb926ab29 362 PANTHER PTHR11835 4 362 2.7E-219 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RR42_RS02600 b937c4d315c1b17e27c406adb926ab29 362 SUPERFAMILY SSF53659 2 362 3.26E-115 T 23-04-2016 RR42_RS02600 b937c4d315c1b17e27c406adb926ab29 362 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 358 9.1E-83 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RR42_RS02600 b937c4d315c1b17e27c406adb926ab29 362 Gene3D G3DSA:3.40.718.10 3 352 2.7E-115 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RR42_RS02600 b937c4d315c1b17e27c406adb926ab29 362 SMART SM01329 5 358 7.9E-177 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RR42_RS02565 6e819394baa84eac413d53f68510b5b8 323 SUPERFAMILY SSF46785 1 86 1.13E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS02565 6e819394baa84eac413d53f68510b5b8 323 SUPERFAMILY SSF53850 91 266 2.35E-20 T 23-04-2016 RR42_RS02565 6e819394baa84eac413d53f68510b5b8 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.9E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS02565 6e819394baa84eac413d53f68510b5b8 323 Pfam PF03466 LysR substrate binding domain 89 266 8.2E-19 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS02565 6e819394baa84eac413d53f68510b5b8 323 PANTHER PTHR30126:SF2 1 283 4.8E-83 T 23-04-2016 RR42_RS02565 6e819394baa84eac413d53f68510b5b8 323 Gene3D G3DSA:3.40.190.10 206 263 2.8E-5 T 23-04-2016 RR42_RS02565 6e819394baa84eac413d53f68510b5b8 323 PANTHER PTHR30126 1 283 4.8E-83 T 23-04-2016 RR42_RS02565 6e819394baa84eac413d53f68510b5b8 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.6E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS02565 6e819394baa84eac413d53f68510b5b8 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.6E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS02565 6e819394baa84eac413d53f68510b5b8 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.6E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS02565 6e819394baa84eac413d53f68510b5b8 323 Gene3D G3DSA:3.40.190.10 91 205 4.2E-6 T 23-04-2016 RR42_RS02565 6e819394baa84eac413d53f68510b5b8 323 Gene3D G3DSA:1.10.10.10 1 84 1.7E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS16710 8333e288ff92917fd87317560ca2471f 126 PANTHER PTHR11803 1 123 9.4E-40 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family RR42_RS16710 8333e288ff92917fd87317560ca2471f 126 SUPERFAMILY SSF55298 3 124 4.4E-39 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RR42_RS16710 8333e288ff92917fd87317560ca2471f 126 Gene3D G3DSA:3.30.1330.40 2 124 3.6E-38 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RR42_RS16710 8333e288ff92917fd87317560ca2471f 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 15 123 7.3E-32 T 23-04-2016 IPR006056 RidA family RR42_RS16710 8333e288ff92917fd87317560ca2471f 126 Pfam PF01042 Endoribonuclease L-PSP 13 123 5.7E-31 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family RR42_RS14470 e104fa1ff8a46aec8b7b0049b5b980d3 326 PANTHER PTHR11105 17 325 3.3E-41 T 23-04-2016 RR42_RS14470 e104fa1ff8a46aec8b7b0049b5b980d3 326 PIRSF PIRSF015582 37 319 3.3E-44 T 23-04-2016 IPR011206 Citrate lyase beta subunit-like RR42_RS14470 e104fa1ff8a46aec8b7b0049b5b980d3 326 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 46 178 1.4E-11 T 23-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 RR42_RS14470 e104fa1ff8a46aec8b7b0049b5b980d3 326 PANTHER PTHR11105:SF0 17 325 3.3E-41 T 23-04-2016 RR42_RS14470 e104fa1ff8a46aec8b7b0049b5b980d3 326 SUPERFAMILY SSF51621 26 262 1.36E-40 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS14470 e104fa1ff8a46aec8b7b0049b5b980d3 326 Gene3D G3DSA:3.20.20.60 25 262 2.1E-44 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS12435 55c57a874296f1f29eabd46ad3dad9eb 909 Hamap MF_01600 UPF0182 protein . 9 857 19.131 T 23-04-2016 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 RR42_RS12435 55c57a874296f1f29eabd46ad3dad9eb 909 PANTHER PTHR39344 1 905 0.0 T 23-04-2016 RR42_RS12435 55c57a874296f1f29eabd46ad3dad9eb 909 Pfam PF03699 Uncharacterised protein family (UPF0182) 20 782 6.9E-285 T 23-04-2016 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 RR42_RS19175 81f7184c50d17d8e3bc394cefb771d96 118 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 118 25.222 T 23-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19175 81f7184c50d17d8e3bc394cefb771d96 118 SUPERFAMILY SSF53137 3 116 3.92E-48 T 23-04-2016 RR42_RS19175 81f7184c50d17d8e3bc394cefb771d96 118 PANTHER PTHR12899 1 118 2.3E-34 T 23-04-2016 RR42_RS19175 81f7184c50d17d8e3bc394cefb771d96 118 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 118 6.9E-36 T 23-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19175 81f7184c50d17d8e3bc394cefb771d96 118 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 118 6.6E-35 T 23-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19175 81f7184c50d17d8e3bc394cefb771d96 118 Gene3D G3DSA:3.30.420.100 24 118 6.0E-34 T 23-04-2016 RR42_RS00005 d28b33014bc57e3a2deae7345d78708b 595 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 2 594 31.941 T 23-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RR42_RS00005 d28b33014bc57e3a2deae7345d78708b 595 SMART SM00760 503 572 1.2E-41 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RR42_RS00005 d28b33014bc57e3a2deae7345d78708b 595 SMART SM00382 292 426 6.0E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS00005 d28b33014bc57e3a2deae7345d78708b 595 ProSitePatterns PS01008 DnaA protein signature. 553 572 - T 23-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RR42_RS00005 d28b33014bc57e3a2deae7345d78708b 595 Gene3D G3DSA:3.40.50.300 250 424 3.4E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS00005 d28b33014bc57e3a2deae7345d78708b 595 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 504 572 2.6E-31 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RR42_RS00005 d28b33014bc57e3a2deae7345d78708b 595 PANTHER PTHR30050 1 103 1.3E-183 T 23-04-2016 RR42_RS00005 d28b33014bc57e3a2deae7345d78708b 595 PANTHER PTHR30050 258 595 1.3E-183 T 23-04-2016 RR42_RS00005 d28b33014bc57e3a2deae7345d78708b 595 SUPERFAMILY SSF52540 260 471 1.76E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS00005 d28b33014bc57e3a2deae7345d78708b 595 Gene3D G3DSA:1.10.8.60 426 493 9.5E-29 T 23-04-2016 RR42_RS00005 d28b33014bc57e3a2deae7345d78708b 595 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 293 313 6.2E-49 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RR42_RS00005 d28b33014bc57e3a2deae7345d78708b 595 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 357 371 6.2E-49 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RR42_RS00005 d28b33014bc57e3a2deae7345d78708b 595 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 553 572 6.2E-49 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RR42_RS00005 d28b33014bc57e3a2deae7345d78708b 595 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 391 418 6.2E-49 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RR42_RS00005 d28b33014bc57e3a2deae7345d78708b 595 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 325 339 6.2E-49 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RR42_RS00005 d28b33014bc57e3a2deae7345d78708b 595 PANTHER PTHR30050:SF2 1 103 1.3E-183 T 23-04-2016 RR42_RS00005 d28b33014bc57e3a2deae7345d78708b 595 PANTHER PTHR30050:SF2 258 595 1.3E-183 T 23-04-2016 RR42_RS00005 d28b33014bc57e3a2deae7345d78708b 595 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 241 593 4.1E-156 T 23-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RR42_RS00005 d28b33014bc57e3a2deae7345d78708b 595 SUPERFAMILY SSF48295 491 594 2.56E-37 T 23-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RR42_RS00005 d28b33014bc57e3a2deae7345d78708b 595 Gene3D G3DSA:1.10.1750.10 494 594 1.9E-41 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RR42_RS00005 d28b33014bc57e3a2deae7345d78708b 595 Pfam PF11638 DnaA N-terminal domain 3 65 4.0E-17 T 23-04-2016 IPR024633 DnaA N-terminal domain RR42_RS00005 d28b33014bc57e3a2deae7345d78708b 595 Pfam PF00308 Bacterial dnaA protein 260 477 3.6E-86 T 23-04-2016 IPR013317 Chromosomal replication initiator protein DnaA RR42_RS17975 8b04b2c5586d5944f69053d3ff84b2b8 456 Pfam PF02661 Fic/DOC family 227 317 2.1E-10 T 23-04-2016 IPR003812 Fido domain RR42_RS17975 8b04b2c5586d5944f69053d3ff84b2b8 456 Gene3D G3DSA:1.10.10.10 24 68 3.0E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS17975 8b04b2c5586d5944f69053d3ff84b2b8 456 SUPERFAMILY SSF140931 198 348 2.88E-19 T 23-04-2016 IPR003812 Fido domain RR42_RS17975 8b04b2c5586d5944f69053d3ff84b2b8 456 Gene3D G3DSA:1.10.3290.10 155 373 6.0E-34 T 23-04-2016 IPR003812 Fido domain RR42_RS17975 8b04b2c5586d5944f69053d3ff84b2b8 456 PANTHER PTHR13504 162 320 1.9E-12 T 23-04-2016 RR42_RS17975 8b04b2c5586d5944f69053d3ff84b2b8 456 PANTHER PTHR13504:SF29 162 320 1.9E-12 T 23-04-2016 RR42_RS00280 e5c867f72710ade1d3f19ed3ab0fe8b1 183 PANTHER PTHR11592:SF40 1 179 5.7E-70 T 23-04-2016 RR42_RS00280 e5c867f72710ade1d3f19ed3ab0fe8b1 183 PIRSF PIRSF000303 1 182 2.5E-56 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RR42_RS00280 e5c867f72710ade1d3f19ed3ab0fe8b1 183 SUPERFAMILY SSF52833 4 179 2.42E-51 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS00280 e5c867f72710ade1d3f19ed3ab0fe8b1 183 PRINTS PR01011 Glutathione peroxidase family signature 58 74 8.1E-17 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RR42_RS00280 e5c867f72710ade1d3f19ed3ab0fe8b1 183 PRINTS PR01011 Glutathione peroxidase family signature 141 150 8.1E-17 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RR42_RS00280 e5c867f72710ade1d3f19ed3ab0fe8b1 183 PRINTS PR01011 Glutathione peroxidase family signature 23 40 8.1E-17 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RR42_RS00280 e5c867f72710ade1d3f19ed3ab0fe8b1 183 PANTHER PTHR11592 1 179 5.7E-70 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RR42_RS00280 e5c867f72710ade1d3f19ed3ab0fe8b1 183 Pfam PF00255 Glutathione peroxidase 5 111 1.0E-33 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RR42_RS00280 e5c867f72710ade1d3f19ed3ab0fe8b1 183 Gene3D G3DSA:3.40.30.10 4 180 2.6E-60 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS09095 443e172e1581ea4c605067a8d99264d3 447 PANTHER PTHR11895 4 446 3.1E-105 T 23-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RR42_RS09095 443e172e1581ea4c605067a8d99264d3 447 Pfam PF01425 Amidase 27 433 8.2E-86 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RR42_RS09095 443e172e1581ea4c605067a8d99264d3 447 ProSitePatterns PS00571 Amidases signature. 151 182 - T 23-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RR42_RS09095 443e172e1581ea4c605067a8d99264d3 447 Gene3D G3DSA:3.90.1300.10 4 444 8.7E-115 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RR42_RS09095 443e172e1581ea4c605067a8d99264d3 447 SUPERFAMILY SSF75304 3 444 1.96E-114 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RR42_RS04845 48c902d6e0d0391192e4cf92f8304609 345 PIRSF PIRSF017082 16 345 1.1E-81 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS04845 48c902d6e0d0391192e4cf92f8304609 345 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 68 339 2.7E-93 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS04845 48c902d6e0d0391192e4cf92f8304609 345 SUPERFAMILY SSF53850 133 307 2.87E-15 T 23-04-2016 RR42_RS04845 48c902d6e0d0391192e4cf92f8304609 345 PANTHER PTHR30349 10 345 1.1E-85 T 23-04-2016 RR42_RS04845 48c902d6e0d0391192e4cf92f8304609 345 PANTHER PTHR30349:SF32 10 345 1.1E-85 T 23-04-2016 RR42_RS18685 11490e3f1c7a34452346f9a651339e0c 834 Gene3D G3DSA:3.40.50.150 188 423 2.2E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS18685 11490e3f1c7a34452346f9a651339e0c 834 Pfam PF12161 HsdM N-terminal domain 8 150 4.0E-27 T 23-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain RR42_RS18685 11490e3f1c7a34452346f9a651339e0c 834 SUPERFAMILY SSF53335 7 45 8.28E-131 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS18685 11490e3f1c7a34452346f9a651339e0c 834 SUPERFAMILY SSF53335 79 511 8.28E-131 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS18685 11490e3f1c7a34452346f9a651339e0c 834 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 290 296 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RR42_RS18685 11490e3f1c7a34452346f9a651339e0c 834 Pfam PF02384 N-6 DNA Methylase 164 488 1.7E-95 T 23-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 RR42_RS18685 11490e3f1c7a34452346f9a651339e0c 834 PANTHER PTHR30195 122 641 3.4E-111 T 23-04-2016 RR42_RS18685 11490e3f1c7a34452346f9a651339e0c 834 PANTHER PTHR30195:SF2 122 641 3.4E-111 T 23-04-2016 RR42_RS18685 11490e3f1c7a34452346f9a651339e0c 834 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 210 224 8.1E-21 T 23-04-2016 RR42_RS18685 11490e3f1c7a34452346f9a651339e0c 834 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 287 299 8.1E-21 T 23-04-2016 RR42_RS18685 11490e3f1c7a34452346f9a651339e0c 834 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 186 202 8.1E-21 T 23-04-2016 RR42_RS18685 11490e3f1c7a34452346f9a651339e0c 834 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 333 357 8.1E-21 T 23-04-2016 RR42_RS09030 04a84f115af5f71d899ca86cbc18e1b1 803 TIGRFAM TIGR00763 lon: endopeptidase La 15 773 5.4E-303 T 23-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 RR42_RS09030 04a84f115af5f71d899ca86cbc18e1b1 803 SMART SM00464 13 205 5.4E-80 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 RR42_RS09030 04a84f115af5f71d899ca86cbc18e1b1 803 SUPERFAMILY SSF54211 597 772 2.05E-59 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RR42_RS09030 04a84f115af5f71d899ca86cbc18e1b1 803 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 571 774 7.7E-97 T 23-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 RR42_RS09030 04a84f115af5f71d899ca86cbc18e1b1 803 SUPERFAMILY SSF88697 13 204 4.97E-53 T 23-04-2016 IPR015947 PUA-like domain RR42_RS09030 04a84f115af5f71d899ca86cbc18e1b1 803 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 14 203 7.9E-45 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 RR42_RS09030 04a84f115af5f71d899ca86cbc18e1b1 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 675 694 9.8E-55 T 23-04-2016 RR42_RS09030 04a84f115af5f71d899ca86cbc18e1b1 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 358 377 9.8E-55 T 23-04-2016 RR42_RS09030 04a84f115af5f71d899ca86cbc18e1b1 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 597 613 9.8E-55 T 23-04-2016 RR42_RS09030 04a84f115af5f71d899ca86cbc18e1b1 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 728 746 9.8E-55 T 23-04-2016 RR42_RS09030 04a84f115af5f71d899ca86cbc18e1b1 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 705 724 9.8E-55 T 23-04-2016 RR42_RS09030 04a84f115af5f71d899ca86cbc18e1b1 803 Gene3D G3DSA:3.40.50.300 313 501 5.0E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS09030 04a84f115af5f71d899ca86cbc18e1b1 803 SUPERFAMILY SSF52540 314 588 1.53E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS09030 04a84f115af5f71d899ca86cbc18e1b1 803 Gene3D G3DSA:1.10.8.60 502 586 1.1E-32 T 23-04-2016 RR42_RS09030 04a84f115af5f71d899ca86cbc18e1b1 803 SMART SM00382 350 502 1.0E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS09030 04a84f115af5f71d899ca86cbc18e1b1 803 Hamap MF_01973 Lon protease [lon]. 14 774 71.624 T 23-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 RR42_RS09030 04a84f115af5f71d899ca86cbc18e1b1 803 Gene3D G3DSA:3.30.230.10 593 773 7.8E-77 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RR42_RS09030 04a84f115af5f71d899ca86cbc18e1b1 803 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 354 491 1.8E-17 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RR42_RS09030 04a84f115af5f71d899ca86cbc18e1b1 803 PIRSF PIRSF001174 4 777 0.0 T 23-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 RR42_RS09030 04a84f115af5f71d899ca86cbc18e1b1 803 PANTHER PTHR10046:SF43 11 778 0.0 T 23-04-2016 RR42_RS09030 04a84f115af5f71d899ca86cbc18e1b1 803 PANTHER PTHR10046 11 778 0.0 T 23-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 RR42_RS20075 9828f1b84e11ab98631355819ae92f59 180 PANTHER PTHR34582 8 160 1.7E-35 T 23-04-2016 RR42_RS20075 9828f1b84e11ab98631355819ae92f59 180 PANTHER PTHR34582:SF6 8 160 1.7E-35 T 23-04-2016 RR42_RS20075 9828f1b84e11ab98631355819ae92f59 180 Pfam PF04239 Protein of unknown function (DUF421) 93 156 1.6E-13 T 23-04-2016 IPR007353 Protein of unknown function DUF421 RR42_RS20075 9828f1b84e11ab98631355819ae92f59 180 Gene3D G3DSA:3.30.240.20 86 155 2.0E-20 T 23-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain RR42_RS09610 914fd372e4cd425ddea5b19fcd10dd07 452 Pfam PF10996 Beta-Casp domain 247 366 4.4E-24 T 23-04-2016 IPR022712 Beta-Casp domain RR42_RS09610 914fd372e4cd425ddea5b19fcd10dd07 452 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 380 443 2.1E-12 T 23-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain RR42_RS09610 914fd372e4cd425ddea5b19fcd10dd07 452 SMART SM01027 247 366 3.1E-47 T 23-04-2016 IPR022712 Beta-Casp domain RR42_RS09610 914fd372e4cd425ddea5b19fcd10dd07 452 SUPERFAMILY SSF56281 1 450 4.3E-127 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS09610 914fd372e4cd425ddea5b19fcd10dd07 452 SMART SM00849 13 231 1.9E-15 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS09610 914fd372e4cd425ddea5b19fcd10dd07 452 PANTHER PTHR11203:SF11 1 451 6.4E-106 T 23-04-2016 RR42_RS09610 914fd372e4cd425ddea5b19fcd10dd07 452 Pfam PF00753 Metallo-beta-lactamase superfamily 17 75 4.7E-11 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS09610 914fd372e4cd425ddea5b19fcd10dd07 452 PANTHER PTHR11203 1 451 6.4E-106 T 23-04-2016 RR42_RS09610 914fd372e4cd425ddea5b19fcd10dd07 452 Gene3D G3DSA:3.60.15.10 135 257 1.6E-50 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS09610 914fd372e4cd425ddea5b19fcd10dd07 452 Gene3D G3DSA:3.60.15.10 1 100 1.6E-50 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS14500 17eb1d783c9c469bd522e9932311e8fb 227 SUPERFAMILY SSF53335 27 181 1.15E-14 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS14500 17eb1d783c9c469bd522e9932311e8fb 227 Gene3D G3DSA:3.40.50.150 42 95 8.7E-9 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS14500 17eb1d783c9c469bd522e9932311e8fb 227 Pfam PF02390 Putative methyltransferase 59 188 1.7E-9 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 RR42_RS07830 c4e12249ddf767707d0d290aaa0a35a3 468 SUPERFAMILY SSF55031 257 364 1.44E-29 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS07830 c4e12249ddf767707d0d290aaa0a35a3 468 PANTHER PTHR11014:SF63 56 467 5.5E-140 T 23-04-2016 RR42_RS07830 c4e12249ddf767707d0d290aaa0a35a3 468 PANTHER PTHR11014 56 467 5.5E-140 T 23-04-2016 RR42_RS07830 c4e12249ddf767707d0d290aaa0a35a3 468 SUPERFAMILY SSF53187 57 270 1.35E-81 T 23-04-2016 RR42_RS07830 c4e12249ddf767707d0d290aaa0a35a3 468 SUPERFAMILY SSF53187 372 463 1.35E-81 T 23-04-2016 RR42_RS07830 c4e12249ddf767707d0d290aaa0a35a3 468 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 68 449 4.8E-105 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 RR42_RS07830 c4e12249ddf767707d0d290aaa0a35a3 468 Pfam PF07687 Peptidase dimerisation domain 258 354 6.8E-12 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS07830 c4e12249ddf767707d0d290aaa0a35a3 468 Gene3D G3DSA:3.30.70.360 254 371 6.7E-37 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS07830 c4e12249ddf767707d0d290aaa0a35a3 468 PIRSF PIRSF005962 52 467 8.9E-121 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 RR42_RS07830 c4e12249ddf767707d0d290aaa0a35a3 468 Pfam PF01546 Peptidase family M20/M25/M40 126 458 9.7E-32 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RR42_RS07830 c4e12249ddf767707d0d290aaa0a35a3 468 Gene3D G3DSA:3.40.630.10 372 464 7.4E-102 T 23-04-2016 RR42_RS07830 c4e12249ddf767707d0d290aaa0a35a3 468 Gene3D G3DSA:3.40.630.10 48 251 7.4E-102 T 23-04-2016 RR42_RS08080 6e615e1d0ffa05f482df8f99aa47b1b4 295 PANTHER PTHR22683:SF41 225 288 6.3E-24 T 23-04-2016 RR42_RS08080 6e615e1d0ffa05f482df8f99aa47b1b4 295 Pfam PF09397 Ftsk gamma domain 230 288 9.4E-26 T 23-04-2016 IPR018541 FtsK gamma domain RR42_RS08080 6e615e1d0ffa05f482df8f99aa47b1b4 295 SMART SM00843 227 292 2.7E-32 T 23-04-2016 IPR018541 FtsK gamma domain RR42_RS08080 6e615e1d0ffa05f482df8f99aa47b1b4 295 Gene3D G3DSA:1.10.10.620 182 228 3.8E-15 T 23-04-2016 IPR023200 Ribosome modulation factor-like domain RR42_RS08080 6e615e1d0ffa05f482df8f99aa47b1b4 295 PANTHER PTHR22683 225 288 6.3E-24 T 23-04-2016 RR42_RS08080 6e615e1d0ffa05f482df8f99aa47b1b4 295 SUPERFAMILY SSF46785 229 293 3.4E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS17985 5b2eed255f47e75cc405a17a7dc82dba 421 PANTHER PTHR30012:SF0 29 421 1.4E-155 T 23-04-2016 RR42_RS17985 5b2eed255f47e75cc405a17a7dc82dba 421 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 400 6.11013E-19 T 23-04-2016 IPR003004 GspF/PilC family RR42_RS17985 5b2eed255f47e75cc405a17a7dc82dba 421 PRINTS PR00812 Bacterial general secretion pathway protein F signature 182 210 6.11013E-19 T 23-04-2016 IPR003004 GspF/PilC family RR42_RS17985 5b2eed255f47e75cc405a17a7dc82dba 421 PRINTS PR00812 Bacterial general secretion pathway protein F signature 402 421 6.11013E-19 T 23-04-2016 IPR003004 GspF/PilC family RR42_RS17985 5b2eed255f47e75cc405a17a7dc82dba 421 PRINTS PR00812 Bacterial general secretion pathway protein F signature 83 95 6.11013E-19 T 23-04-2016 IPR003004 GspF/PilC family RR42_RS17985 5b2eed255f47e75cc405a17a7dc82dba 421 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 182 210 - T 23-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 RR42_RS17985 5b2eed255f47e75cc405a17a7dc82dba 421 Pfam PF00482 Type II secretion system (T2SS), protein F 291 413 1.6E-29 T 23-04-2016 IPR018076 Type II secretion system F domain RR42_RS17985 5b2eed255f47e75cc405a17a7dc82dba 421 Pfam PF00482 Type II secretion system (T2SS), protein F 87 210 7.3E-34 T 23-04-2016 IPR018076 Type II secretion system F domain RR42_RS17985 5b2eed255f47e75cc405a17a7dc82dba 421 PANTHER PTHR30012 29 421 1.4E-155 T 23-04-2016 RR42_RS03830 1509b9307c86db21b9ac87ca55575946 240 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS03830 1509b9307c86db21b9ac87ca55575946 240 Pfam PF00005 ABC transporter 27 168 6.0E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS03830 1509b9307c86db21b9ac87ca55575946 240 SMART SM00382 27 218 1.1E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS03830 1509b9307c86db21b9ac87ca55575946 240 SUPERFAMILY SSF52540 18 224 1.55E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03830 1509b9307c86db21b9ac87ca55575946 240 Gene3D G3DSA:3.40.50.300 27 225 3.6E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03830 1509b9307c86db21b9ac87ca55575946 240 PANTHER PTHR24220 31 219 6.4E-66 T 23-04-2016 RR42_RS17945 970ed1434b07c422f0d8f7b489ff2d14 366 Pfam PF01018 GTP1/OBG 3 158 1.1E-57 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 RR42_RS17945 970ed1434b07c422f0d8f7b489ff2d14 366 Gene3D G3DSA:2.70.210.12 2 156 7.6E-56 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 RR42_RS17945 970ed1434b07c422f0d8f7b489ff2d14 366 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 161 329 6.9E-12 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RR42_RS17945 970ed1434b07c422f0d8f7b489ff2d14 366 PANTHER PTHR11702 1 340 9.8E-160 T 23-04-2016 RR42_RS17945 970ed1434b07c422f0d8f7b489ff2d14 366 Gene3D G3DSA:3.40.50.300 160 339 8.4E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17945 970ed1434b07c422f0d8f7b489ff2d14 366 SUPERFAMILY SSF82051 2 158 8.76E-56 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 RR42_RS17945 970ed1434b07c422f0d8f7b489ff2d14 366 SUPERFAMILY SSF52540 152 337 6.59E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17945 970ed1434b07c422f0d8f7b489ff2d14 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 4.8E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RR42_RS17945 970ed1434b07c422f0d8f7b489ff2d14 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 4.8E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RR42_RS17945 970ed1434b07c422f0d8f7b489ff2d14 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 4.8E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RR42_RS17945 970ed1434b07c422f0d8f7b489ff2d14 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 4.8E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RR42_RS17945 970ed1434b07c422f0d8f7b489ff2d14 366 Pfam PF01926 50S ribosome-binding GTPase 161 285 3.4E-25 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RR42_RS17945 970ed1434b07c422f0d8f7b489ff2d14 366 Hamap MF_01454 GTPase Obg [obg]. 2 334 47.502 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RR42_RS17945 970ed1434b07c422f0d8f7b489ff2d14 366 PIRSF PIRSF002401 1 365 5.8E-134 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RR42_RS17945 970ed1434b07c422f0d8f7b489ff2d14 366 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 333 5.5E-143 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RR42_RS17945 970ed1434b07c422f0d8f7b489ff2d14 366 PANTHER PTHR11702:SF3 1 340 9.8E-160 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RR42_RS17945 970ed1434b07c422f0d8f7b489ff2d14 366 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 23-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 RR42_RS14440 a3b94069cd1ba04cbf4a1675345426e4 233 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 225 1.1E-84 T 23-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RR42_RS14440 a3b94069cd1ba04cbf4a1675345426e4 233 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 107 4.3E-32 T 23-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RR42_RS14440 a3b94069cd1ba04cbf4a1675345426e4 233 Gene3D G3DSA:1.10.1060.10 103 231 3.2E-47 T 23-04-2016 RR42_RS14440 a3b94069cd1ba04cbf4a1675345426e4 233 SUPERFAMILY SSF46548 103 231 4.71E-39 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RR42_RS14440 a3b94069cd1ba04cbf4a1675345426e4 233 PANTHER PTHR11921 5 231 3.2E-130 T 23-04-2016 RR42_RS14440 a3b94069cd1ba04cbf4a1675345426e4 233 Gene3D G3DSA:3.10.20.30 2 102 4.3E-37 T 23-04-2016 IPR012675 Beta-grasp domain RR42_RS14440 a3b94069cd1ba04cbf4a1675345426e4 233 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RR42_RS14440 a3b94069cd1ba04cbf4a1675345426e4 233 Pfam PF13534 4Fe-4S dicluster domain 143 216 5.9E-9 T 23-04-2016 RR42_RS14440 a3b94069cd1ba04cbf4a1675345426e4 233 SUPERFAMILY SSF54292 2 102 2.33E-28 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS13515 7601caf44a8b75fd579c812aed10b996 226 PANTHER PTHR30086 9 221 3.8E-83 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RR42_RS13515 7601caf44a8b75fd579c812aed10b996 226 Pfam PF01810 LysE type translocator 22 222 6.8E-46 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RR42_RS13515 7601caf44a8b75fd579c812aed10b996 226 PANTHER PTHR30086:SF15 9 221 3.8E-83 T 23-04-2016 RR42_RS13515 7601caf44a8b75fd579c812aed10b996 226 PIRSF PIRSF006324 8 225 4.9E-52 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RR42_RS03290 93eaebcccca60431f0b2a7ebbeb61daf 233 SMART SM00862 155 228 1.8E-17 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS03290 93eaebcccca60431f0b2a7ebbeb61daf 233 SUPERFAMILY SSF52172 1 132 8.68E-35 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS03290 93eaebcccca60431f0b2a7ebbeb61daf 233 PANTHER PTHR26402 1 229 3.7E-72 T 23-04-2016 RR42_RS03290 93eaebcccca60431f0b2a7ebbeb61daf 233 SUPERFAMILY SSF46894 129 229 1.19E-21 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS03290 93eaebcccca60431f0b2a7ebbeb61daf 233 Pfam PF00072 Response regulator receiver domain 3 122 9.7E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS03290 93eaebcccca60431f0b2a7ebbeb61daf 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 228 1.1E-16 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS03290 93eaebcccca60431f0b2a7ebbeb61daf 233 PANTHER PTHR26402:SF518 1 229 3.7E-72 T 23-04-2016 RR42_RS03290 93eaebcccca60431f0b2a7ebbeb61daf 233 Gene3D G3DSA:1.10.10.10 133 230 1.6E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS03290 93eaebcccca60431f0b2a7ebbeb61daf 233 Gene3D G3DSA:3.40.50.2300 1 132 1.1E-34 T 23-04-2016 RR42_RS03290 93eaebcccca60431f0b2a7ebbeb61daf 233 SMART SM00448 1 122 1.5E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS07565 b0d6eb9a4acf9f5365fb3d2c2c7bbeb3 789 SUPERFAMILY SSF50249 649 734 1.86E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS07565 b0d6eb9a4acf9f5365fb3d2c2c7bbeb3 789 Gene3D G3DSA:2.40.50.140 645 732 1.7E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS07565 b0d6eb9a4acf9f5365fb3d2c2c7bbeb3 789 Pfam PF00575 S1 RNA binding domain 661 732 6.9E-19 T 23-04-2016 IPR003029 S1 domain GO:0003676 RR42_RS07565 b0d6eb9a4acf9f5365fb3d2c2c7bbeb3 789 Gene3D G3DSA:1.10.150.310 511 642 5.9E-46 T 23-04-2016 IPR023097 Tex RuvX-like domain RR42_RS07565 b0d6eb9a4acf9f5365fb3d2c2c7bbeb3 789 SUPERFAMILY SSF53098 333 481 1.29E-50 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS07565 b0d6eb9a4acf9f5365fb3d2c2c7bbeb3 789 PANTHER PTHR10724 7 774 0.0 T 23-04-2016 RR42_RS07565 b0d6eb9a4acf9f5365fb3d2c2c7bbeb3 789 Pfam PF09371 Tex-like protein N-terminal domain 16 203 2.7E-69 T 23-04-2016 IPR018974 Tex-like protein, N-terminal RR42_RS07565 b0d6eb9a4acf9f5365fb3d2c2c7bbeb3 789 Gene3D G3DSA:1.10.3500.10 463 510 6.2E-101 T 23-04-2016 IPR023323 Tex-like domain RR42_RS07565 b0d6eb9a4acf9f5365fb3d2c2c7bbeb3 789 Gene3D G3DSA:1.10.3500.10 117 333 6.2E-101 T 23-04-2016 IPR023323 Tex-like domain RR42_RS07565 b0d6eb9a4acf9f5365fb3d2c2c7bbeb3 789 SMART SM00316 661 732 3.4E-23 T 23-04-2016 IPR022967 RNA-binding domain, S1 RR42_RS07565 b0d6eb9a4acf9f5365fb3d2c2c7bbeb3 789 Pfam PF12836 Helix-hairpin-helix motif 503 567 2.0E-27 T 23-04-2016 RR42_RS07565 b0d6eb9a4acf9f5365fb3d2c2c7bbeb3 789 PANTHER PTHR10724:SF1 7 774 0.0 T 23-04-2016 RR42_RS07565 b0d6eb9a4acf9f5365fb3d2c2c7bbeb3 789 SUPERFAMILY SSF47781 482 570 1.33E-28 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RR42_RS07565 b0d6eb9a4acf9f5365fb3d2c2c7bbeb3 789 SUPERFAMILY SSF47781 572 644 5.11E-19 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RR42_RS07565 b0d6eb9a4acf9f5365fb3d2c2c7bbeb3 789 Gene3D G3DSA:3.30.420.140 337 462 4.1E-52 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RR42_RS07565 b0d6eb9a4acf9f5365fb3d2c2c7bbeb3 789 Gene3D G3DSA:1.10.10.650 7 116 4.2E-47 T 23-04-2016 IPR023319 Tex-like protein, HTH domain RR42_RS07565 b0d6eb9a4acf9f5365fb3d2c2c7bbeb3 789 SUPERFAMILY SSF158832 8 332 5.23E-116 T 23-04-2016 RR42_RS07565 b0d6eb9a4acf9f5365fb3d2c2c7bbeb3 789 Pfam PF16921 Tex protein YqgF-like domain 337 463 1.9E-53 T 23-04-2016 IPR032639 Tex protein, YqgF-like domain RR42_RS07565 b0d6eb9a4acf9f5365fb3d2c2c7bbeb3 789 SMART SM00732 337 436 5.1E-35 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RR42_RS11855 116a151470d3146693bcd708f9bcd935 257 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 16 241 6.6E-90 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RR42_RS11855 116a151470d3146693bcd708f9bcd935 257 SUPERFAMILY SSF64005 15 237 6.28E-86 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RR42_RS11855 116a151470d3146693bcd708f9bcd935 257 PANTHER PTHR10291 16 254 2.0E-118 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RR42_RS11855 116a151470d3146693bcd708f9bcd935 257 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 16 242 40.569 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RR42_RS11855 116a151470d3146693bcd708f9bcd935 257 Gene3D G3DSA:3.40.1180.10 12 247 2.4E-96 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RR42_RS11855 116a151470d3146693bcd708f9bcd935 257 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 187 204 - T 23-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 RR42_RS11855 116a151470d3146693bcd708f9bcd935 257 Pfam PF01255 Putative undecaprenyl diphosphate synthase 23 241 1.7E-78 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RR42_RS20080 0c75ff81afba51bc1167561b225a732c 458 SUPERFAMILY SSF143548 17 157 2.54E-45 T 23-04-2016 IPR029009 Allosteric substrate binding domain RR42_RS20080 0c75ff81afba51bc1167561b225a732c 458 Pfam PF03313 Serine dehydratase alpha chain 188 452 5.3E-103 T 23-04-2016 IPR005130 Serine dehydratase-like, alpha subunit RR42_RS20080 0c75ff81afba51bc1167561b225a732c 458 PANTHER PTHR30182:SF1 3 456 6.1E-232 T 23-04-2016 RR42_RS20080 0c75ff81afba51bc1167561b225a732c 458 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 455 4.6E-210 T 23-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 RR42_RS20080 0c75ff81afba51bc1167561b225a732c 458 Pfam PF03315 Serine dehydratase beta chain 4 156 9.5E-57 T 23-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 RR42_RS20080 0c75ff81afba51bc1167561b225a732c 458 PANTHER PTHR30182 3 456 6.1E-232 T 23-04-2016 RR42_RS20080 0c75ff81afba51bc1167561b225a732c 458 Gene3D G3DSA:3.30.1330.90 11 157 3.6E-53 T 23-04-2016 IPR029009 Allosteric substrate binding domain RR42_RS11200 6204c23803872736d073434be06ed7a4 233 SUPERFAMILY SSF51182 93 204 9.15E-27 T 23-04-2016 IPR011051 RmlC-like cupin domain RR42_RS11200 6204c23803872736d073434be06ed7a4 233 Pfam PF13560 Helix-turn-helix domain 25 79 5.9E-11 T 23-04-2016 RR42_RS11200 6204c23803872736d073434be06ed7a4 233 Gene3D G3DSA:1.10.260.40 21 82 2.1E-14 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS11200 6204c23803872736d073434be06ed7a4 233 PANTHER PTHR10245 23 204 9.1E-25 T 23-04-2016 RR42_RS11200 6204c23803872736d073434be06ed7a4 233 Gene3D G3DSA:2.60.120.10 83 205 5.3E-15 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS11200 6204c23803872736d073434be06ed7a4 233 PANTHER PTHR10245:SF30 23 204 9.1E-25 T 23-04-2016 RR42_RS11200 6204c23803872736d073434be06ed7a4 233 SMART SM00530 28 83 1.4E-9 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RR42_RS11200 6204c23803872736d073434be06ed7a4 233 Pfam PF07883 Cupin domain 145 199 7.4E-15 T 23-04-2016 IPR013096 Cupin 2, conserved barrel RR42_RS11200 6204c23803872736d073434be06ed7a4 233 SUPERFAMILY SSF47413 21 87 4.79E-14 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS02295 d325e25a16d64756954783d02ae07585 317 Gene3D G3DSA:2.40.50.100 195 227 6.4E-9 T 23-04-2016 RR42_RS02295 d325e25a16d64756954783d02ae07585 317 Gene3D G3DSA:2.40.50.100 36 68 6.4E-9 T 23-04-2016 RR42_RS02295 d325e25a16d64756954783d02ae07585 317 PANTHER PTHR32347:SF15 7 314 2.0E-59 T 23-04-2016 RR42_RS02295 d325e25a16d64756954783d02ae07585 317 Pfam PF13437 HlyD family secretion protein 198 309 1.7E-14 T 23-04-2016 RR42_RS02295 d325e25a16d64756954783d02ae07585 317 SUPERFAMILY SSF111369 126 250 4.58E-5 T 23-04-2016 RR42_RS02295 d325e25a16d64756954783d02ae07585 317 Pfam PF13533 Biotin-lipoyl like 36 82 1.6E-8 T 23-04-2016 RR42_RS02295 d325e25a16d64756954783d02ae07585 317 PANTHER PTHR32347 7 314 2.0E-59 T 23-04-2016 RR42_RS30060 e5d6bb8f1ae3fdca610baae47518c42e 328 PANTHER PTHR23508:SF18 15 328 1.9E-53 T 23-04-2016 RR42_RS30060 e5d6bb8f1ae3fdca610baae47518c42e 328 Gene3D G3DSA:1.20.1250.20 13 196 3.2E-39 T 23-04-2016 RR42_RS30060 e5d6bb8f1ae3fdca610baae47518c42e 328 Gene3D G3DSA:1.20.1250.20 227 328 4.8E-11 T 23-04-2016 RR42_RS30060 e5d6bb8f1ae3fdca610baae47518c42e 328 SUPERFAMILY SSF103473 10 328 2.49E-63 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS30060 e5d6bb8f1ae3fdca610baae47518c42e 328 Pfam PF07690 Major Facilitator Superfamily 22 322 4.1E-45 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS30060 e5d6bb8f1ae3fdca610baae47518c42e 328 PANTHER PTHR23508 15 328 1.9E-53 T 23-04-2016 RR42_RS19830 dfa5820f2cf12098c48cf141b3e1bd56 312 Gene3D G3DSA:1.10.10.10 1 87 4.7E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19830 dfa5820f2cf12098c48cf141b3e1bd56 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.7E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS19830 dfa5820f2cf12098c48cf141b3e1bd56 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.7E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS19830 dfa5820f2cf12098c48cf141b3e1bd56 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.7E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS19830 dfa5820f2cf12098c48cf141b3e1bd56 312 Gene3D G3DSA:3.40.190.10 92 196 4.3E-20 T 23-04-2016 RR42_RS19830 dfa5820f2cf12098c48cf141b3e1bd56 312 SUPERFAMILY SSF46785 1 109 1.17E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19830 dfa5820f2cf12098c48cf141b3e1bd56 312 PANTHER PTHR30346 1 312 3.0E-50 T 23-04-2016 RR42_RS19830 dfa5820f2cf12098c48cf141b3e1bd56 312 SUPERFAMILY SSF53850 92 303 4.81E-26 T 23-04-2016 RR42_RS19830 dfa5820f2cf12098c48cf141b3e1bd56 312 Pfam PF03466 LysR substrate binding domain 90 295 3.9E-22 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS19830 dfa5820f2cf12098c48cf141b3e1bd56 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 9.2E-21 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS14815 43c6aa5e50440ea9795cbbd08202abc6 228 PANTHER PTHR31088 5 224 2.5E-16 T 23-04-2016 RR42_RS14815 43c6aa5e50440ea9795cbbd08202abc6 228 Pfam PF04012 PspA/IM30 family 8 223 1.1E-11 T 23-04-2016 IPR007157 PspA/IM30 RR42_RS00695 35e3908bb4891d5748aa3ffa501a182b 300 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 45 284 3.0E-42 T 23-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 RR42_RS00695 35e3908bb4891d5748aa3ffa501a182b 300 Gene3D G3DSA:3.30.930.10 33 235 5.6E-50 T 23-04-2016 RR42_RS00695 35e3908bb4891d5748aa3ffa501a182b 300 Pfam PF02237 Biotin protein ligase C terminal domain 240 284 2.9E-9 T 23-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 RR42_RS00695 35e3908bb4891d5748aa3ffa501a182b 300 PANTHER PTHR12835 26 285 1.5E-52 T 23-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 RR42_RS00695 35e3908bb4891d5748aa3ffa501a182b 300 SUPERFAMILY SSF55681 32 235 2.15E-45 T 23-04-2016 RR42_RS00695 35e3908bb4891d5748aa3ffa501a182b 300 SUPERFAMILY SSF50037 238 284 3.3E-8 T 23-04-2016 IPR008988 Transcriptional repressor, C-terminal RR42_RS00695 35e3908bb4891d5748aa3ffa501a182b 300 Gene3D G3DSA:2.30.30.100 237 287 3.9E-16 T 23-04-2016 RR42_RS00695 35e3908bb4891d5748aa3ffa501a182b 300 Pfam PF03099 Biotin/lipoate A/B protein ligase family 69 174 8.4E-14 T 23-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 RR42_RS01245 85bb8a9d394f12a4cd99821f3d1b9b37 269 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 30 249 1.9E-71 T 23-04-2016 IPR022488 Polyphosphate kinase-2-related RR42_RS01245 85bb8a9d394f12a4cd99821f3d1b9b37 269 Gene3D G3DSA:3.40.50.300 4 262 1.5E-94 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01245 85bb8a9d394f12a4cd99821f3d1b9b37 269 TIGRFAM TIGR03709 PPK2_rel_1: polyphosphate:nucleotide phosphotransferase, PPK2 family 5 264 3.2E-112 T 23-04-2016 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 RR42_RS01245 85bb8a9d394f12a4cd99821f3d1b9b37 269 PIRSF PIRSF028756 4 264 3.5E-76 T 23-04-2016 IPR016898 Polyphosphate kinase 2 RR42_RS01245 85bb8a9d394f12a4cd99821f3d1b9b37 269 PANTHER PTHR34383 35 258 8.0E-96 T 23-04-2016 RR42_RS01245 85bb8a9d394f12a4cd99821f3d1b9b37 269 SUPERFAMILY SSF52540 61 246 2.88E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13435 d04898bc7c0042350115121a4b962f77 694 Gene3D G3DSA:3.30.870.10 511 689 2.9E-72 T 23-04-2016 RR42_RS13435 d04898bc7c0042350115121a4b962f77 694 PANTHER PTHR30218 1 688 0.0 T 23-04-2016 RR42_RS13435 d04898bc7c0042350115121a4b962f77 694 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 9 688 3.4E-285 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 RR42_RS13435 d04898bc7c0042350115121a4b962f77 694 PIRSF PIRSF015589 1 692 1.1E-261 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 RR42_RS13435 d04898bc7c0042350115121a4b962f77 694 Gene3D G3DSA:3.30.1840.10 112 304 6.4E-64 T 23-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 RR42_RS13435 d04898bc7c0042350115121a4b962f77 694 Pfam PF13090 Polyphosphate kinase C-terminal domain 334 687 9.3E-154 T 23-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 RR42_RS13435 d04898bc7c0042350115121a4b962f77 694 PANTHER PTHR30218:SF0 1 688 0.0 T 23-04-2016 RR42_RS13435 d04898bc7c0042350115121a4b962f77 694 SUPERFAMILY SSF56024 318 503 1.76E-56 T 23-04-2016 RR42_RS13435 d04898bc7c0042350115121a4b962f77 694 Pfam PF02503 Polyphosphate kinase middle domain 124 325 1.5E-57 T 23-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 RR42_RS13435 d04898bc7c0042350115121a4b962f77 694 Pfam PF13089 Polyphosphate kinase N-terminal domain 10 114 1.9E-31 T 23-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 RR42_RS13435 d04898bc7c0042350115121a4b962f77 694 SUPERFAMILY SSF143724 114 317 1.96E-60 T 23-04-2016 RR42_RS13435 d04898bc7c0042350115121a4b962f77 694 SUPERFAMILY SSF140356 6 110 4.71E-32 T 23-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 RR42_RS13435 d04898bc7c0042350115121a4b962f77 694 Gene3D G3DSA:3.30.870.10 319 510 5.1E-77 T 23-04-2016 RR42_RS13435 d04898bc7c0042350115121a4b962f77 694 SUPERFAMILY SSF56024 511 688 2.92E-69 T 23-04-2016 RR42_RS13435 d04898bc7c0042350115121a4b962f77 694 Hamap MF_00347 Polyphosphate kinase [ppk]. 6 693 32.142 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 RR42_RS13050 9188e4e54449e630fc1b742b8c94bc65 312 Pfam PF00923 Transaldolase 13 310 2.5E-100 T 23-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RR42_RS13050 9188e4e54449e630fc1b742b8c94bc65 312 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 23-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RR42_RS13050 9188e4e54449e630fc1b742b8c94bc65 312 PANTHER PTHR10683 1 312 4.0E-185 T 23-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RR42_RS13050 9188e4e54449e630fc1b742b8c94bc65 312 Hamap MF_00492 Transaldolase [tal]. 1 312 48.932 T 23-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RR42_RS13050 9188e4e54449e630fc1b742b8c94bc65 312 Gene3D G3DSA:3.20.20.70 1 311 1.7E-127 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS13050 9188e4e54449e630fc1b742b8c94bc65 312 TIGRFAM TIGR00874 talAB: transaldolase 2 311 1.2E-139 T 23-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RR42_RS13050 9188e4e54449e630fc1b742b8c94bc65 312 PANTHER PTHR10683:SF18 1 312 4.0E-185 T 23-04-2016 RR42_RS13050 9188e4e54449e630fc1b742b8c94bc65 312 SUPERFAMILY SSF51569 1 311 3.77E-112 T 23-04-2016 RR42_RS13050 9188e4e54449e630fc1b742b8c94bc65 312 ProSitePatterns PS00958 Transaldolase active site. 120 137 - T 23-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RR42_RS12545 9994f9ebbed9427955218e406f599923 410 Pfam PF00155 Aminotransferase class I and II 34 395 2.0E-50 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RR42_RS12545 9994f9ebbed9427955218e406f599923 410 Gene3D G3DSA:3.90.1150.10 280 404 2.3E-43 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS12545 9994f9ebbed9427955218e406f599923 410 SUPERFAMILY SSF53383 6 402 2.89E-99 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS12545 9994f9ebbed9427955218e406f599923 410 Gene3D G3DSA:3.40.640.10 51 279 6.6E-68 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS12545 9994f9ebbed9427955218e406f599923 410 PANTHER PTHR11751 9 405 4.4E-172 T 23-04-2016 RR42_RS12545 9994f9ebbed9427955218e406f599923 410 PANTHER PTHR11751:SF303 9 405 4.4E-172 T 23-04-2016 RR42_RS04410 c4afa0ff02ab62c7ccbfaf963e70af00 878 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 7 870 0.0 T 23-04-2016 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 RR42_RS04410 c4afa0ff02ab62c7ccbfaf963e70af00 878 SUPERFAMILY SSF53244 725 857 3.85E-22 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RR42_RS04410 c4afa0ff02ab62c7ccbfaf963e70af00 878 SUPERFAMILY SSF53623 461 739 2.14E-32 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS04410 c4afa0ff02ab62c7ccbfaf963e70af00 878 PANTHER PTHR23135:SF18 388 853 1.8E-73 T 23-04-2016 RR42_RS04410 c4afa0ff02ab62c7ccbfaf963e70af00 878 SUPERFAMILY SSF56059 219 475 1.93E-31 T 23-04-2016 RR42_RS04410 c4afa0ff02ab62c7ccbfaf963e70af00 878 Pfam PF08245 Mur ligase middle domain 489 700 2.2E-14 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS04410 c4afa0ff02ab62c7ccbfaf963e70af00 878 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 219 304 8.5E-6 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RR42_RS04410 c4afa0ff02ab62c7ccbfaf963e70af00 878 Gene3D G3DSA:3.90.190.20 728 859 4.7E-22 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RR42_RS04410 c4afa0ff02ab62c7ccbfaf963e70af00 878 Pfam PF02875 Mur ligase family, glutamate ligase domain 725 801 1.5E-9 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RR42_RS04410 c4afa0ff02ab62c7ccbfaf963e70af00 878 Gene3D G3DSA:3.40.1190.10 483 718 1.3E-32 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS04410 c4afa0ff02ab62c7ccbfaf963e70af00 878 PANTHER PTHR23135 388 853 1.8E-73 T 23-04-2016 RR42_RS04410 c4afa0ff02ab62c7ccbfaf963e70af00 878 Gene3D G3DSA:3.30.470.20 216 338 6.3E-22 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RR42_RS04410 c4afa0ff02ab62c7ccbfaf963e70af00 878 Gene3D G3DSA:3.30.470.20 394 448 6.3E-22 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RR42_RS10055 341455fa8956f47a93b765497441f400 222 Gene3D G3DSA:1.10.357.10 23 218 3.1E-24 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS10055 341455fa8956f47a93b765497441f400 222 PANTHER PTHR30055 21 221 3.1E-14 T 23-04-2016 RR42_RS10055 341455fa8956f47a93b765497441f400 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 35 76 8.4E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS10055 341455fa8956f47a93b765497441f400 222 SUPERFAMILY SSF46689 22 101 9.75E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS10055 341455fa8956f47a93b765497441f400 222 SUPERFAMILY SSF48498 115 210 8.56E-5 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RR42_RS00930 cedd437d8e251ddb9761e1b0b0e8cf0f 405 PANTHER PTHR13693 9 405 5.3E-153 T 23-04-2016 RR42_RS00930 cedd437d8e251ddb9761e1b0b0e8cf0f 405 SUPERFAMILY SSF53383 44 399 4.92E-95 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS00930 cedd437d8e251ddb9761e1b0b0e8cf0f 405 Pfam PF00155 Aminotransferase class I and II 47 395 5.2E-55 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RR42_RS00930 cedd437d8e251ddb9761e1b0b0e8cf0f 405 PANTHER PTHR13693:SF53 9 405 5.3E-153 T 23-04-2016 RR42_RS00930 cedd437d8e251ddb9761e1b0b0e8cf0f 405 Gene3D G3DSA:3.40.640.10 63 280 1.2E-78 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS00930 cedd437d8e251ddb9761e1b0b0e8cf0f 405 Gene3D G3DSA:3.90.1150.10 281 397 1.2E-31 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS00930 cedd437d8e251ddb9761e1b0b0e8cf0f 405 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 2 399 48.076 T 23-04-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 RR42_RS00930 cedd437d8e251ddb9761e1b0b0e8cf0f 405 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 395 1.8E-132 T 23-04-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 RR42_RS26480 df65034e37f5d1551daccb3c7cabf70c 281 PANTHER PTHR30621 4 280 5.2E-84 T 23-04-2016 RR42_RS26480 df65034e37f5d1551daccb3c7cabf70c 281 SUPERFAMILY SSF81301 2 181 3.01E-57 T 23-04-2016 RR42_RS26480 df65034e37f5d1551daccb3c7cabf70c 281 Gene3D G3DSA:3.30.460.10 2 180 1.4E-56 T 23-04-2016 RR42_RS26480 df65034e37f5d1551daccb3c7cabf70c 281 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 3 162 1.2E-56 T 23-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 RR42_RS26480 df65034e37f5d1551daccb3c7cabf70c 281 Pfam PF08335 GlnD PII-uridylyltransferase 192 281 3.1E-22 T 23-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RR42_RS26480 df65034e37f5d1551daccb3c7cabf70c 281 SUPERFAMILY SSF81593 182 280 2.9E-23 T 23-04-2016 RR42_RS05165 80c92ca8a32a8a9a6d56e719470f7b85 221 Gene3D G3DSA:1.20.120.530 72 210 9.7E-28 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS05165 80c92ca8a32a8a9a6d56e719470f7b85 221 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 66 3.2E-18 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS05165 80c92ca8a32a8a9a6d56e719470f7b85 221 SMART SM00345 8 66 1.3E-16 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS05165 80c92ca8a32a8a9a6d56e719470f7b85 221 SUPERFAMILY SSF46785 3 70 3.75E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS05165 80c92ca8a32a8a9a6d56e719470f7b85 221 SMART SM00895 76 200 5.6E-20 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS05165 80c92ca8a32a8a9a6d56e719470f7b85 221 PANTHER PTHR11751 7 92 2.8E-24 T 23-04-2016 RR42_RS05165 80c92ca8a32a8a9a6d56e719470f7b85 221 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 8.7E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS05165 80c92ca8a32a8a9a6d56e719470f7b85 221 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 8.7E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS05165 80c92ca8a32a8a9a6d56e719470f7b85 221 SUPERFAMILY SSF48008 73 202 4.18E-24 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS05165 80c92ca8a32a8a9a6d56e719470f7b85 221 Gene3D G3DSA:1.10.10.10 3 67 4.8E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS05165 80c92ca8a32a8a9a6d56e719470f7b85 221 Pfam PF07729 FCD domain 76 198 7.8E-26 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS06570 8c7f2991105d4cc23637eec0ec52548e 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 9.9E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS06570 8c7f2991105d4cc23637eec0ec52548e 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 9.9E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS06570 8c7f2991105d4cc23637eec0ec52548e 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 9.9E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS06570 8c7f2991105d4cc23637eec0ec52548e 258 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 5 258 4.8E-118 T 23-04-2016 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 RR42_RS06570 8c7f2991105d4cc23637eec0ec52548e 258 Pfam PF00106 short chain dehydrogenase 5 197 1.3E-54 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS06570 8c7f2991105d4cc23637eec0ec52548e 258 SUPERFAMILY SSF51735 3 257 3.57E-74 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS06570 8c7f2991105d4cc23637eec0ec52548e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 2.8E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS06570 8c7f2991105d4cc23637eec0ec52548e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.8E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS06570 8c7f2991105d4cc23637eec0ec52548e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 2.8E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS06570 8c7f2991105d4cc23637eec0ec52548e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.8E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS06570 8c7f2991105d4cc23637eec0ec52548e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.8E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS06570 8c7f2991105d4cc23637eec0ec52548e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.8E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS06570 8c7f2991105d4cc23637eec0ec52548e 258 Gene3D G3DSA:3.40.50.720 1 256 3.9E-79 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS06570 8c7f2991105d4cc23637eec0ec52548e 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RR42_RS06570 8c7f2991105d4cc23637eec0ec52548e 258 PANTHER PTHR24322:SF328 9 137 6.0E-54 T 23-04-2016 RR42_RS06570 8c7f2991105d4cc23637eec0ec52548e 258 PANTHER PTHR24322:SF328 153 185 6.0E-54 T 23-04-2016 RR42_RS06570 8c7f2991105d4cc23637eec0ec52548e 258 PANTHER PTHR24322 9 137 6.0E-54 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS06570 8c7f2991105d4cc23637eec0ec52548e 258 PANTHER PTHR24322 153 185 6.0E-54 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS03325 38dd3d81812cd17c6e38709950690645 425 SMART SM00388 216 274 9.8E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS03325 38dd3d81812cd17c6e38709950690645 425 Pfam PF00672 HAMP domain 146 211 4.5E-12 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS03325 38dd3d81812cd17c6e38709950690645 425 SMART SM00304 163 215 3.3E-6 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS03325 38dd3d81812cd17c6e38709950690645 425 SMART SM00387 311 420 9.6E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS03325 38dd3d81812cd17c6e38709950690645 425 Pfam PF00512 His Kinase A (phospho-acceptor) domain 217 272 9.7E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS03325 38dd3d81812cd17c6e38709950690645 425 PANTHER PTHR24423 157 419 7.3E-42 T 23-04-2016 RR42_RS03325 38dd3d81812cd17c6e38709950690645 425 PANTHER PTHR24423 1 14 7.3E-42 T 23-04-2016 RR42_RS03325 38dd3d81812cd17c6e38709950690645 425 Gene3D G3DSA:3.30.565.10 283 420 5.2E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS03325 38dd3d81812cd17c6e38709950690645 425 SUPERFAMILY SSF55874 275 419 7.6E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS03325 38dd3d81812cd17c6e38709950690645 425 SUPERFAMILY SSF47384 199 271 2.75E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS03325 38dd3d81812cd17c6e38709950690645 425 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 314 418 5.6E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS03325 38dd3d81812cd17c6e38709950690645 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 360 6.5E-5 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS03325 38dd3d81812cd17c6e38709950690645 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 398 6.5E-5 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS03325 38dd3d81812cd17c6e38709950690645 425 Gene3D G3DSA:1.10.287.130 206 269 2.0E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS05805 83f52fb2c013b860b086efb1e63926d1 300 SUPERFAMILY SSF53850 92 296 1.19E-37 T 23-04-2016 RR42_RS05805 83f52fb2c013b860b086efb1e63926d1 300 PANTHER PTHR30537:SF26 1 294 6.6E-97 T 23-04-2016 RR42_RS05805 83f52fb2c013b860b086efb1e63926d1 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 6.4E-11 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS05805 83f52fb2c013b860b086efb1e63926d1 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 6.4E-11 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS05805 83f52fb2c013b860b086efb1e63926d1 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 6.4E-11 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS05805 83f52fb2c013b860b086efb1e63926d1 300 Gene3D G3DSA:3.40.190.10 165 263 4.6E-32 T 23-04-2016 RR42_RS05805 83f52fb2c013b860b086efb1e63926d1 300 SUPERFAMILY SSF46785 7 115 1.51E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS05805 83f52fb2c013b860b086efb1e63926d1 300 Pfam PF03466 LysR substrate binding domain 91 295 9.0E-35 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS05805 83f52fb2c013b860b086efb1e63926d1 300 Gene3D G3DSA:1.10.10.10 6 85 3.0E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS05805 83f52fb2c013b860b086efb1e63926d1 300 Gene3D G3DSA:3.40.190.10 91 130 4.8E-7 T 23-04-2016 RR42_RS05805 83f52fb2c013b860b086efb1e63926d1 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 6.3E-20 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS05805 83f52fb2c013b860b086efb1e63926d1 300 PANTHER PTHR30537 1 294 6.6E-97 T 23-04-2016 RR42_RS11375 3467496ffcd007ccea65785c0966e92c 324 Gene3D G3DSA:3.50.30.60 180 306 5.1E-43 T 23-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain RR42_RS11375 3467496ffcd007ccea65785c0966e92c 324 SUPERFAMILY SSF52317 10 166 7.78E-33 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RR42_RS11375 3467496ffcd007ccea65785c0966e92c 324 SUPERFAMILY SSF141986 148 303 1.07E-41 T 23-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain RR42_RS11375 3467496ffcd007ccea65785c0966e92c 324 PANTHER PTHR30237:SF2 1 317 3.6E-80 T 23-04-2016 RR42_RS11375 3467496ffcd007ccea65785c0966e92c 324 PANTHER PTHR30237 1 317 3.6E-80 T 23-04-2016 RR42_RS11375 3467496ffcd007ccea65785c0966e92c 324 PIRSF PIRSF028757 6 313 2.5E-66 T 23-04-2016 IPR003507 Peptidase family S66 RR42_RS11375 3467496ffcd007ccea65785c0966e92c 324 Gene3D G3DSA:3.40.50.10740 9 169 8.3E-37 T 23-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain RR42_RS11375 3467496ffcd007ccea65785c0966e92c 324 Pfam PF02016 LD-carboxypeptidase 14 299 2.0E-65 T 23-04-2016 IPR003507 Peptidase family S66 RR42_RS00040 fc0966f9df674b55babcc4619bd7efd6 207 Gene3D G3DSA:1.10.10.60 140 185 8.5E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS00040 fc0966f9df674b55babcc4619bd7efd6 207 Pfam PF00239 Resolvase, N terminal domain 5 137 7.3E-41 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RR42_RS00040 fc0966f9df674b55babcc4619bd7efd6 207 Gene3D G3DSA:3.40.50.1390 5 122 2.7E-39 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RR42_RS00040 fc0966f9df674b55babcc4619bd7efd6 207 SMART SM00857 4 138 2.0E-51 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RR42_RS00040 fc0966f9df674b55babcc4619bd7efd6 207 Pfam PF02796 Helix-turn-helix domain of resolvase 140 183 4.7E-12 T 23-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 RR42_RS00040 fc0966f9df674b55babcc4619bd7efd6 207 PANTHER PTHR30461 5 190 3.3E-47 T 23-04-2016 RR42_RS00040 fc0966f9df674b55babcc4619bd7efd6 207 SUPERFAMILY SSF53041 4 137 1.83E-41 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RR42_RS00040 fc0966f9df674b55babcc4619bd7efd6 207 SUPERFAMILY SSF46689 140 185 8.78E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS00040 fc0966f9df674b55babcc4619bd7efd6 207 ProSitePatterns PS00398 Site-specific recombinases signature 2. 57 69 - T 23-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 RR42_RS13205 45ced72181cc21793607f94602d65247 324 Gene3D G3DSA:3.90.180.10 1 144 2.6E-45 T 23-04-2016 IPR011032 GroES-like RR42_RS13205 45ced72181cc21793607f94602d65247 324 Pfam PF00107 Zinc-binding dehydrogenase 151 273 3.9E-28 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RR42_RS13205 45ced72181cc21793607f94602d65247 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 89 9.2E-13 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RR42_RS13205 45ced72181cc21793607f94602d65247 324 Gene3D G3DSA:3.40.50.720 145 262 2.6E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS13205 45ced72181cc21793607f94602d65247 324 SUPERFAMILY SSF50129 1 140 2.83E-39 T 23-04-2016 IPR011032 GroES-like RR42_RS13205 45ced72181cc21793607f94602d65247 324 SUPERFAMILY SSF51735 111 280 6.02E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS13205 45ced72181cc21793607f94602d65247 324 SMART SM00829 10 322 1.1E-51 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RR42_RS13205 45ced72181cc21793607f94602d65247 324 PANTHER PTHR11695:SF31 15 324 2.7E-130 T 23-04-2016 RR42_RS13205 45ced72181cc21793607f94602d65247 324 PANTHER PTHR11695 15 324 2.7E-130 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RR42_RS08840 c4a4034c737156eca7fa2845b213fdbe 226 Pfam PF04405 Domain of Unknown function (DUF542) 5 59 2.5E-21 T 23-04-2016 IPR019903 Repair of iron centres family RR42_RS08840 c4a4034c737156eca7fa2845b213fdbe 226 Pfam PF01814 Hemerythrin HHE cation binding domain 78 216 5.5E-26 T 23-04-2016 IPR012312 Haemerythrin-like RR42_RS08840 c4a4034c737156eca7fa2845b213fdbe 226 PANTHER PTHR36438:SF1 1 220 5.7E-82 T 23-04-2016 RR42_RS08840 c4a4034c737156eca7fa2845b213fdbe 226 PANTHER PTHR36438 1 220 5.7E-82 T 23-04-2016 RR42_RS08840 c4a4034c737156eca7fa2845b213fdbe 226 Gene3D G3DSA:1.20.120.520 80 220 9.5E-28 T 23-04-2016 RR42_RS18565 6e22ccf9fc62acca3479581d87f816d0 377 Gene3D G3DSA:3.60.21.10 151 327 1.4E-23 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS18565 6e22ccf9fc62acca3479581d87f816d0 377 PANTHER PTHR31302:SF7 115 377 3.3E-88 T 23-04-2016 RR42_RS18565 6e22ccf9fc62acca3479581d87f816d0 377 SUPERFAMILY SSF56300 151 374 4.98E-36 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS18565 6e22ccf9fc62acca3479581d87f816d0 377 Pfam PF00149 Calcineurin-like phosphoesterase 151 319 2.2E-9 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RR42_RS18565 6e22ccf9fc62acca3479581d87f816d0 377 PANTHER PTHR31302 115 377 3.3E-88 T 23-04-2016 RR42_RS28250 2d546d33f1d9091d628c80e705d63125 289 SUPERFAMILY SSF53187 64 286 3.29E-56 T 23-04-2016 RR42_RS28250 2d546d33f1d9091d628c80e705d63125 289 Pfam PF01546 Peptidase family M20/M25/M40 136 271 3.9E-8 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RR42_RS28250 2d546d33f1d9091d628c80e705d63125 289 PANTHER PTHR32494 13 289 3.5E-71 T 23-04-2016 RR42_RS28250 2d546d33f1d9091d628c80e705d63125 289 Gene3D G3DSA:3.40.630.10 64 288 5.0E-66 T 23-04-2016 RR42_RS14000 1b167d41aab692391ec7dd67391e9078 686 Pfam PF01541 GIY-YIG catalytic domain 36 110 1.4E-8 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily RR42_RS14000 1b167d41aab692391ec7dd67391e9078 686 Gene3D G3DSA:4.10.860.10 199 260 2.3E-18 T 23-04-2016 IPR001943 UVR domain GO:0005515 RR42_RS14000 1b167d41aab692391ec7dd67391e9078 686 PANTHER PTHR30562:SF1 539 685 1.4E-219 T 23-04-2016 RR42_RS14000 1b167d41aab692391ec7dd67391e9078 686 PANTHER PTHR30562:SF1 1 302 1.4E-219 T 23-04-2016 RR42_RS14000 1b167d41aab692391ec7dd67391e9078 686 PANTHER PTHR30562 345 514 1.4E-219 T 23-04-2016 RR42_RS14000 1b167d41aab692391ec7dd67391e9078 686 Hamap MF_00203 UvrABC system protein C [uvrC]. 21 684 26.441 T 23-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 RR42_RS14000 1b167d41aab692391ec7dd67391e9078 686 SUPERFAMILY SSF46600 207 259 1.7E-12 T 23-04-2016 IPR001943 UVR domain GO:0005515 RR42_RS14000 1b167d41aab692391ec7dd67391e9078 686 Gene3D G3DSA:1.10.150.20 632 686 1.2E-20 T 23-04-2016 RR42_RS14000 1b167d41aab692391ec7dd67391e9078 686 PANTHER PTHR30562 539 685 1.4E-219 T 23-04-2016 RR42_RS14000 1b167d41aab692391ec7dd67391e9078 686 SMART SM00465 34 115 5.1E-18 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily RR42_RS14000 1b167d41aab692391ec7dd67391e9078 686 SUPERFAMILY SSF47781 584 686 1.56E-18 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RR42_RS14000 1b167d41aab692391ec7dd67391e9078 686 SUPERFAMILY SSF82771 34 117 1.7E-22 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily RR42_RS14000 1b167d41aab692391ec7dd67391e9078 686 Pfam PF02151 UvrB/uvrC motif 221 253 8.5E-8 T 23-04-2016 IPR001943 UVR domain GO:0005515 RR42_RS14000 1b167d41aab692391ec7dd67391e9078 686 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 28 301 8.3E-95 T 23-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 RR42_RS14000 1b167d41aab692391ec7dd67391e9078 686 PANTHER PTHR30562 1 302 1.4E-219 T 23-04-2016 RR42_RS14000 1b167d41aab692391ec7dd67391e9078 686 Gene3D G3DSA:3.40.1440.10 35 114 6.5E-7 T 23-04-2016 IPR027299 GIY-YIG domain RR42_RS14000 1b167d41aab692391ec7dd67391e9078 686 PANTHER PTHR30562:SF1 345 514 1.4E-219 T 23-04-2016 RR42_RS14000 1b167d41aab692391ec7dd67391e9078 686 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 449 619 2.6E-45 T 23-04-2016 IPR001162 UvrC family homology region RR42_RS16410 80bde26984304f8ada327ddd5f51b684 301 PANTHER PTHR30427 1 289 6.8E-83 T 23-04-2016 RR42_RS16410 80bde26984304f8ada327ddd5f51b684 301 Gene3D G3DSA:1.10.10.10 2 78 4.5E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS16410 80bde26984304f8ada327ddd5f51b684 301 Gene3D G3DSA:3.40.190.10 92 177 5.6E-23 T 23-04-2016 RR42_RS16410 80bde26984304f8ada327ddd5f51b684 301 Pfam PF03466 LysR substrate binding domain 90 291 2.0E-40 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS16410 80bde26984304f8ada327ddd5f51b684 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 9.7E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS16410 80bde26984304f8ada327ddd5f51b684 301 SUPERFAMILY SSF53850 91 292 1.76E-38 T 23-04-2016 RR42_RS16410 80bde26984304f8ada327ddd5f51b684 301 Gene3D G3DSA:3.40.190.10 178 262 2.5E-20 T 23-04-2016 RR42_RS16410 80bde26984304f8ada327ddd5f51b684 301 SUPERFAMILY SSF46785 2 113 3.43E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS16410 80bde26984304f8ada327ddd5f51b684 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.2E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS16410 80bde26984304f8ada327ddd5f51b684 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.2E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS16410 80bde26984304f8ada327ddd5f51b684 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.2E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS19840 f9051ea23fa73fc50d7210cc1c14f75d 403 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 28 389 4.6E-98 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 RR42_RS19840 f9051ea23fa73fc50d7210cc1c14f75d 403 SUPERFAMILY SSF53187 18 210 2.65E-83 T 23-04-2016 RR42_RS19840 f9051ea23fa73fc50d7210cc1c14f75d 403 SUPERFAMILY SSF53187 311 401 2.65E-83 T 23-04-2016 RR42_RS19840 f9051ea23fa73fc50d7210cc1c14f75d 403 Gene3D G3DSA:3.30.70.360 195 310 5.3E-41 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS19840 f9051ea23fa73fc50d7210cc1c14f75d 403 PANTHER PTHR11014:SF63 24 401 5.5E-135 T 23-04-2016 RR42_RS19840 f9051ea23fa73fc50d7210cc1c14f75d 403 SUPERFAMILY SSF55031 197 304 1.7E-30 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS19840 f9051ea23fa73fc50d7210cc1c14f75d 403 Gene3D G3DSA:3.40.630.10 16 191 1.0E-93 T 23-04-2016 RR42_RS19840 f9051ea23fa73fc50d7210cc1c14f75d 403 Gene3D G3DSA:3.40.630.10 311 401 1.0E-93 T 23-04-2016 RR42_RS19840 f9051ea23fa73fc50d7210cc1c14f75d 403 PANTHER PTHR11014 24 401 5.5E-135 T 23-04-2016 RR42_RS19840 f9051ea23fa73fc50d7210cc1c14f75d 403 PIRSF PIRSF005962 18 403 1.6E-113 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 RR42_RS19840 f9051ea23fa73fc50d7210cc1c14f75d 403 Pfam PF01546 Peptidase family M20/M25/M40 86 398 4.8E-35 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RR42_RS19840 f9051ea23fa73fc50d7210cc1c14f75d 403 Pfam PF07687 Peptidase dimerisation domain 200 290 2.4E-11 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS18925 ab20a50e4d2bcab5d3e53153a9988c86 416 SUPERFAMILY SSF55205 1 415 1.16E-142 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 RR42_RS18925 ab20a50e4d2bcab5d3e53153a9988c86 416 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 405 4.6E-108 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RR42_RS18925 ab20a50e4d2bcab5d3e53153a9988c86 416 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 414 6.5E-179 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS18925 ab20a50e4d2bcab5d3e53153a9988c86 416 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 415 46.56 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS18925 ab20a50e4d2bcab5d3e53153a9988c86 416 PANTHER PTHR21090 1 415 2.1E-193 T 23-04-2016 RR42_RS18925 ab20a50e4d2bcab5d3e53153a9988c86 416 Gene3D G3DSA:3.65.10.10 219 414 3.7E-59 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RR42_RS18925 ab20a50e4d2bcab5d3e53153a9988c86 416 Gene3D G3DSA:3.65.10.10 21 218 1.3E-70 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RR42_RS03340 8d5bb3a81b56382108b660a33c2ff720 163 Pfam PF04073 Aminoacyl-tRNA editing domain 38 150 1.0E-23 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RR42_RS03340 8d5bb3a81b56382108b660a33c2ff720 163 PIRSF PIRSF006181 5 163 1.2E-44 T 23-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC RR42_RS03340 8d5bb3a81b56382108b660a33c2ff720 163 Gene3D G3DSA:3.90.960.10 3 159 6.8E-47 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RR42_RS03340 8d5bb3a81b56382108b660a33c2ff720 163 SUPERFAMILY SSF55826 7 159 3.14E-40 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RR42_RS03340 8d5bb3a81b56382108b660a33c2ff720 163 PANTHER PTHR30411:SF0 10 158 1.4E-43 T 23-04-2016 RR42_RS03340 8d5bb3a81b56382108b660a33c2ff720 163 PANTHER PTHR30411 10 158 1.4E-43 T 23-04-2016 RR42_RS02595 e1f7a0a21169fd6bf9bdcdc8474b98d3 276 SUPERFAMILY SSF56235 2 251 2.43E-44 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RR42_RS02595 e1f7a0a21169fd6bf9bdcdc8474b98d3 276 PANTHER PTHR11907:SF10 1 264 1.3E-102 T 23-04-2016 RR42_RS02595 e1f7a0a21169fd6bf9bdcdc8474b98d3 276 Pfam PF13230 Glutamine amidotransferases class-II 1 268 8.6E-129 T 23-04-2016 IPR026869 Putative glutamine amidotransferase type 2 RR42_RS02595 e1f7a0a21169fd6bf9bdcdc8474b98d3 276 PANTHER PTHR11907 1 264 1.3E-102 T 23-04-2016 RR42_RS02595 e1f7a0a21169fd6bf9bdcdc8474b98d3 276 Gene3D G3DSA:3.60.20.10 1 253 5.1E-65 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RR42_RS16190 d02f954df250e0ff84342d3583097eb9 249 SUPERFAMILY SSF48008 76 211 2.33E-28 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS16190 d02f954df250e0ff84342d3583097eb9 249 Gene3D G3DSA:1.10.10.10 5 71 3.7E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS16190 d02f954df250e0ff84342d3583097eb9 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 2.8E-5 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS16190 d02f954df250e0ff84342d3583097eb9 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 2.8E-5 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS16190 d02f954df250e0ff84342d3583097eb9 249 PANTHER PTHR11751:SF362 1 96 4.0E-27 T 23-04-2016 RR42_RS16190 d02f954df250e0ff84342d3583097eb9 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 70 5.4E-17 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS16190 d02f954df250e0ff84342d3583097eb9 249 Gene3D G3DSA:1.20.120.530 73 210 1.3E-30 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS16190 d02f954df250e0ff84342d3583097eb9 249 SMART SM00345 12 70 1.1E-14 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS16190 d02f954df250e0ff84342d3583097eb9 249 Pfam PF07729 FCD domain 80 203 2.0E-28 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS16190 d02f954df250e0ff84342d3583097eb9 249 SUPERFAMILY SSF46785 6 74 3.91E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS16190 d02f954df250e0ff84342d3583097eb9 249 PANTHER PTHR11751 1 96 4.0E-27 T 23-04-2016 RR42_RS16190 d02f954df250e0ff84342d3583097eb9 249 SMART SM00895 80 204 8.7E-24 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS01755 d40ecefcd33fe349e5b056d2034b78bf 112 SUPERFAMILY SSF54913 1 112 2.8E-46 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta RR42_RS01755 d40ecefcd33fe349e5b056d2034b78bf 112 Gene3D G3DSA:3.30.70.120 1 112 1.1E-51 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RR42_RS01755 d40ecefcd33fe349e5b056d2034b78bf 112 PANTHER PTHR30115 1 112 1.4E-68 T 23-04-2016 RR42_RS01755 d40ecefcd33fe349e5b056d2034b78bf 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.5E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RR42_RS01755 d40ecefcd33fe349e5b056d2034b78bf 112 PIRSF PIRSF039144 1 112 1.3E-54 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RR42_RS01755 d40ecefcd33fe349e5b056d2034b78bf 112 SMART SM00938 4 105 5.5E-67 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RR42_RS01755 d40ecefcd33fe349e5b056d2034b78bf 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 23-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 RR42_RS01755 d40ecefcd33fe349e5b056d2034b78bf 112 PANTHER PTHR30115:SF12 1 112 1.4E-68 T 23-04-2016 RR42_RS01755 d40ecefcd33fe349e5b056d2034b78bf 112 PRINTS PR00340 P-II protein signature 23 41 9.3E-45 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RR42_RS01755 d40ecefcd33fe349e5b056d2034b78bf 112 PRINTS PR00340 P-II protein signature 52 75 9.3E-45 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RR42_RS01755 d40ecefcd33fe349e5b056d2034b78bf 112 PRINTS PR00340 P-II protein signature 83 103 9.3E-45 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RR42_RS01755 d40ecefcd33fe349e5b056d2034b78bf 112 PRINTS PR00340 P-II protein signature 2 17 9.3E-45 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RR42_RS01755 d40ecefcd33fe349e5b056d2034b78bf 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 23-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 RR42_RS15315 ee7f4f56b3036bfa693baefe6fd7ca66 397 PRINTS PR01035 Tetracycline resistance protein signature 339 362 6.5E-6 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RR42_RS15315 ee7f4f56b3036bfa693baefe6fd7ca66 397 PRINTS PR01035 Tetracycline resistance protein signature 46 65 6.5E-6 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RR42_RS15315 ee7f4f56b3036bfa693baefe6fd7ca66 397 PRINTS PR01035 Tetracycline resistance protein signature 278 299 6.5E-6 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RR42_RS15315 ee7f4f56b3036bfa693baefe6fd7ca66 397 Gene3D G3DSA:1.20.1250.20 13 184 9.4E-22 T 23-04-2016 RR42_RS15315 ee7f4f56b3036bfa693baefe6fd7ca66 397 Gene3D G3DSA:1.20.1250.20 214 383 2.4E-18 T 23-04-2016 RR42_RS15315 ee7f4f56b3036bfa693baefe6fd7ca66 397 Pfam PF07690 Major Facilitator Superfamily 219 382 5.3E-14 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS15315 ee7f4f56b3036bfa693baefe6fd7ca66 397 Pfam PF07690 Major Facilitator Superfamily 15 187 3.9E-17 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS15315 ee7f4f56b3036bfa693baefe6fd7ca66 397 SUPERFAMILY SSF103473 13 386 6.28E-46 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS19325 6fd640a2f8057f3d54f1076a03d69668 123 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 94 4.0E-12 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 RR42_RS19325 6fd640a2f8057f3d54f1076a03d69668 123 SUPERFAMILY SSF54736 52 123 1.92E-24 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RR42_RS19325 6fd640a2f8057f3d54f1076a03d69668 123 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 123 25.026 T 23-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19325 6fd640a2f8057f3d54f1076a03d69668 123 Gene3D G3DSA:1.20.5.710 2 52 2.0E-23 T 23-04-2016 RR42_RS19325 6fd640a2f8057f3d54f1076a03d69668 123 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 57 123 7.2E-30 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 RR42_RS19325 6fd640a2f8057f3d54f1076a03d69668 123 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 123 1.5E-48 T 23-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19325 6fd640a2f8057f3d54f1076a03d69668 123 Gene3D G3DSA:3.30.1390.10 53 123 5.9E-33 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RR42_RS19325 6fd640a2f8057f3d54f1076a03d69668 123 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 51 1.7E-18 T 23-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19325 6fd640a2f8057f3d54f1076a03d69668 123 SUPERFAMILY SSF48300 4 59 2.62E-17 T 23-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS16970 9e5f71340371700d844d46167f247fe2 386 PANTHER PTHR30482 4 379 2.3E-110 T 23-04-2016 RR42_RS16970 9e5f71340371700d844d46167f247fe2 386 PANTHER PTHR30482:SF10 4 379 2.3E-110 T 23-04-2016 RR42_RS16970 9e5f71340371700d844d46167f247fe2 386 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 357 2.1E-50 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RR42_RS17860 5837b1554678504d9bfefa9f3f107be1 980 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 295 368 3.8E-22 T 23-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 RR42_RS17860 5837b1554678504d9bfefa9f3f107be1 980 PRINTS PR01183 Ribonucleotide reductase large chain signature 766 793 1.2E-44 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS17860 5837b1554678504d9bfefa9f3f107be1 980 PRINTS PR01183 Ribonucleotide reductase large chain signature 624 647 1.2E-44 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS17860 5837b1554678504d9bfefa9f3f107be1 980 PRINTS PR01183 Ribonucleotide reductase large chain signature 690 713 1.2E-44 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS17860 5837b1554678504d9bfefa9f3f107be1 980 PRINTS PR01183 Ribonucleotide reductase large chain signature 582 593 1.2E-44 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS17860 5837b1554678504d9bfefa9f3f107be1 980 PRINTS PR01183 Ribonucleotide reductase large chain signature 447 466 1.2E-44 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS17860 5837b1554678504d9bfefa9f3f107be1 980 PRINTS PR01183 Ribonucleotide reductase large chain signature 662 684 1.2E-44 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS17860 5837b1554678504d9bfefa9f3f107be1 980 Pfam PF02867 Ribonucleotide reductase, barrel domain 372 911 2.0E-185 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS17860 5837b1554678504d9bfefa9f3f107be1 980 Gene3D G3DSA:3.20.70.20 289 493 1.2E-85 T 23-04-2016 RR42_RS17860 5837b1554678504d9bfefa9f3f107be1 980 Gene3D G3DSA:3.20.70.20 548 710 1.2E-85 T 23-04-2016 RR42_RS17860 5837b1554678504d9bfefa9f3f107be1 980 Gene3D G3DSA:3.20.70.20 766 811 1.2E-85 T 23-04-2016 RR42_RS17860 5837b1554678504d9bfefa9f3f107be1 980 Gene3D G3DSA:3.20.70.20 872 913 1.2E-85 T 23-04-2016 RR42_RS17860 5837b1554678504d9bfefa9f3f107be1 980 SUPERFAMILY SSF51998 846 914 4.27E-181 T 23-04-2016 RR42_RS17860 5837b1554678504d9bfefa9f3f107be1 980 SUPERFAMILY SSF51998 371 815 4.27E-181 T 23-04-2016 RR42_RS17860 5837b1554678504d9bfefa9f3f107be1 980 Pfam PF03477 ATP cone domain 37 133 8.9E-17 T 23-04-2016 IPR005144 ATP-cone domain RR42_RS17860 5837b1554678504d9bfefa9f3f107be1 980 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 755 777 - T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS17860 5837b1554678504d9bfefa9f3f107be1 980 PANTHER PTHR11573 154 980 0.0 T 23-04-2016 RR42_RS17860 5837b1554678504d9bfefa9f3f107be1 980 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 303 908 1.9E-120 T 23-04-2016 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS17860 5837b1554678504d9bfefa9f3f107be1 980 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 298 914 3.2E-213 T 23-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 RR42_RS17860 5837b1554678504d9bfefa9f3f107be1 980 SUPERFAMILY SSF48168 160 370 1.29E-59 T 23-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 RR42_RS02995 cfe5e87df06251e1a95c6b920a68abde 304 SUPERFAMILY SSF53850 100 297 9.29E-32 T 23-04-2016 RR42_RS02995 cfe5e87df06251e1a95c6b920a68abde 304 Gene3D G3DSA:3.40.190.10 99 182 2.1E-15 T 23-04-2016 RR42_RS02995 cfe5e87df06251e1a95c6b920a68abde 304 Gene3D G3DSA:3.40.190.10 183 267 7.3E-23 T 23-04-2016 RR42_RS02995 cfe5e87df06251e1a95c6b920a68abde 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 8.7E-12 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS02995 cfe5e87df06251e1a95c6b920a68abde 304 PANTHER PTHR30346:SF0 7 297 8.6E-67 T 23-04-2016 RR42_RS02995 cfe5e87df06251e1a95c6b920a68abde 304 PANTHER PTHR30346 7 297 8.6E-67 T 23-04-2016 RR42_RS02995 cfe5e87df06251e1a95c6b920a68abde 304 Gene3D G3DSA:1.10.10.10 9 94 7.0E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS02995 cfe5e87df06251e1a95c6b920a68abde 304 Pfam PF03466 LysR substrate binding domain 100 297 2.9E-34 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS02995 cfe5e87df06251e1a95c6b920a68abde 304 SUPERFAMILY SSF46785 9 88 7.82E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS09880 1295da1acf709309d287623b523a47b3 501 SUPERFAMILY SSF53697 140 501 1.21E-106 T 23-04-2016 RR42_RS09880 1295da1acf709309d287623b523a47b3 501 SUPERFAMILY SSF56235 2 129 1.37E-28 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RR42_RS09880 1295da1acf709309d287623b523a47b3 501 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 77 501 2.3E-157 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 RR42_RS09880 1295da1acf709309d287623b523a47b3 501 Gene3D G3DSA:3.40.50.10490 138 334 4.8E-67 T 23-04-2016 RR42_RS09880 1295da1acf709309d287623b523a47b3 501 Pfam PF13522 Glutamine amidotransferase domain 40 92 3.1E-6 T 23-04-2016 RR42_RS09880 1295da1acf709309d287623b523a47b3 501 PANTHER PTHR10937 1 501 6.1E-208 T 23-04-2016 RR42_RS09880 1295da1acf709309d287623b523a47b3 501 Gene3D G3DSA:3.60.20.10 41 78 1.5E-9 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RR42_RS09880 1295da1acf709309d287623b523a47b3 501 Gene3D G3DSA:3.60.20.10 2 40 9.3E-12 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RR42_RS09880 1295da1acf709309d287623b523a47b3 501 Pfam PF01380 SIS domain 354 482 1.6E-23 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RR42_RS09880 1295da1acf709309d287623b523a47b3 501 Pfam PF01380 SIS domain 183 308 1.1E-27 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RR42_RS09880 1295da1acf709309d287623b523a47b3 501 PANTHER PTHR10937:SF0 1 501 6.1E-208 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 RR42_RS09880 1295da1acf709309d287623b523a47b3 501 Gene3D G3DSA:3.40.50.10490 335 501 1.6E-62 T 23-04-2016 RR42_RS12105 d47c66dd18dca218513a44358c6d00fe 458 PIRSF PIRSF000337 4 449 7.2E-161 T 23-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 RR42_RS12105 d47c66dd18dca218513a44358c6d00fe 458 Gene3D G3DSA:3.20.20.30 352 440 6.9E-140 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RR42_RS12105 d47c66dd18dca218513a44358c6d00fe 458 Gene3D G3DSA:3.20.20.30 7 313 6.9E-140 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RR42_RS12105 d47c66dd18dca218513a44358c6d00fe 458 PANTHER PTHR30011 1 455 1.3E-215 T 23-04-2016 RR42_RS12105 d47c66dd18dca218513a44358c6d00fe 458 PANTHER PTHR30011:SF18 1 455 1.3E-215 T 23-04-2016 RR42_RS12105 d47c66dd18dca218513a44358c6d00fe 458 Pfam PF00296 Luciferase-like monooxygenase 19 392 6.0E-69 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RR42_RS12105 d47c66dd18dca218513a44358c6d00fe 458 SUPERFAMILY SSF51679 8 440 1.31E-139 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RR42_RS12105 d47c66dd18dca218513a44358c6d00fe 458 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 10 434 6.8E-180 T 23-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 RR42_RS04230 7e5a1afb12e9c13648812db52bde57d2 302 Pfam PF00701 Dihydrodipicolinate synthetase family 11 281 8.0E-56 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS04230 7e5a1afb12e9c13648812db52bde57d2 302 SMART SM01130 10 294 2.6E-93 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS04230 7e5a1afb12e9c13648812db52bde57d2 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 110 126 6.8E-16 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS04230 7e5a1afb12e9c13648812db52bde57d2 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 135 152 6.8E-16 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS04230 7e5a1afb12e9c13648812db52bde57d2 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 43 64 6.8E-16 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS04230 7e5a1afb12e9c13648812db52bde57d2 302 PANTHER PTHR12128 1 297 3.8E-78 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS04230 7e5a1afb12e9c13648812db52bde57d2 302 SUPERFAMILY SSF51569 9 294 9.0E-79 T 23-04-2016 RR42_RS04230 7e5a1afb12e9c13648812db52bde57d2 302 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 18 287 1.0E-64 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS04230 7e5a1afb12e9c13648812db52bde57d2 302 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 140 170 - T 23-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS04230 7e5a1afb12e9c13648812db52bde57d2 302 PANTHER PTHR12128:SF34 1 297 3.8E-78 T 23-04-2016 RR42_RS04230 7e5a1afb12e9c13648812db52bde57d2 302 PIRSF PIRSF001365 8 300 4.4E-71 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS04230 7e5a1afb12e9c13648812db52bde57d2 302 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 10 292 43.268 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS04230 7e5a1afb12e9c13648812db52bde57d2 302 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 46 63 - T 23-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS04230 7e5a1afb12e9c13648812db52bde57d2 302 Gene3D G3DSA:3.20.20.70 7 294 5.4E-85 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS16480 aee7766df1ccd660dad0e832d1a9f4e8 983 SUPERFAMILY SSF55785 410 529 1.74E-19 T 23-04-2016 IPR000014 PAS domain RR42_RS16480 aee7766df1ccd660dad0e832d1a9f4e8 983 Pfam PF08448 PAS fold 425 532 6.3E-11 T 23-04-2016 IPR013656 PAS fold-4 RR42_RS16480 aee7766df1ccd660dad0e832d1a9f4e8 983 Gene3D G3DSA:3.30.70.270 545 709 3.7E-59 T 23-04-2016 RR42_RS16480 aee7766df1ccd660dad0e832d1a9f4e8 983 Pfam PF00990 Diguanylate cyclase, GGDEF domain 543 700 1.9E-53 T 23-04-2016 IPR000160 GGDEF domain RR42_RS16480 aee7766df1ccd660dad0e832d1a9f4e8 983 PANTHER PTHR10799 1 33 7.9E-90 T 23-04-2016 RR42_RS16480 aee7766df1ccd660dad0e832d1a9f4e8 983 PANTHER PTHR10799 576 814 7.9E-90 T 23-04-2016 RR42_RS16480 aee7766df1ccd660dad0e832d1a9f4e8 983 SUPERFAMILY SSF55073 548 706 6.98E-52 T 23-04-2016 IPR029787 Nucleotide cyclase RR42_RS16480 aee7766df1ccd660dad0e832d1a9f4e8 983 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 541 703 1.5E-44 T 23-04-2016 IPR000160 GGDEF domain RR42_RS16480 aee7766df1ccd660dad0e832d1a9f4e8 983 Pfam PF00672 HAMP domain 317 389 1.1E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS16480 aee7766df1ccd660dad0e832d1a9f4e8 983 Gene3D G3DSA:3.30.450.20 192 314 5.3E-9 T 23-04-2016 RR42_RS16480 aee7766df1ccd660dad0e832d1a9f4e8 983 SMART SM00086 490 532 0.0059 T 23-04-2016 IPR001610 PAC motif RR42_RS16480 aee7766df1ccd660dad0e832d1a9f4e8 983 Gene3D G3DSA:3.20.20.450 717 963 6.9E-94 T 23-04-2016 IPR001633 EAL domain RR42_RS16480 aee7766df1ccd660dad0e832d1a9f4e8 983 PANTHER PTHR10799:SF774 1 33 7.9E-90 T 23-04-2016 RR42_RS16480 aee7766df1ccd660dad0e832d1a9f4e8 983 PANTHER PTHR10799:SF774 576 814 7.9E-90 T 23-04-2016 RR42_RS16480 aee7766df1ccd660dad0e832d1a9f4e8 983 Pfam PF02743 Cache domain 55 298 2.1E-15 T 23-04-2016 IPR033479 Double Cache domain 1 RR42_RS16480 aee7766df1ccd660dad0e832d1a9f4e8 983 SMART SM00052 714 959 1.4E-107 T 23-04-2016 IPR001633 EAL domain RR42_RS16480 aee7766df1ccd660dad0e832d1a9f4e8 983 Pfam PF00563 EAL domain 721 954 1.2E-70 T 23-04-2016 IPR001633 EAL domain RR42_RS16480 aee7766df1ccd660dad0e832d1a9f4e8 983 SUPERFAMILY SSF141868 720 965 1.11E-85 T 23-04-2016 IPR001633 EAL domain RR42_RS16480 aee7766df1ccd660dad0e832d1a9f4e8 983 Gene3D G3DSA:3.30.450.20 410 529 5.7E-19 T 23-04-2016 RR42_RS16480 aee7766df1ccd660dad0e832d1a9f4e8 983 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 416 536 5.9E-11 T 23-04-2016 IPR000014 PAS domain RR42_RS16480 aee7766df1ccd660dad0e832d1a9f4e8 983 SMART SM00267 532 704 1.8E-69 T 23-04-2016 IPR000160 GGDEF domain RR42_RS14010 e3f24d571179c48125fe5f10bb63c14e 186 SUPERFAMILY SSF50249 128 185 9.59E-15 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS14010 e3f24d571179c48125fe5f10bb63c14e 186 SMART SM01185 67 120 6.2E-21 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 RR42_RS14010 e3f24d571179c48125fe5f10bb63c14e 186 Gene3D G3DSA:2.30.30.30 1 62 7.4E-20 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 RR42_RS14010 e3f24d571179c48125fe5f10bb63c14e 186 TIGRFAM TIGR00038 efp: translation elongation factor P 3 185 2.3E-62 T 23-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 RR42_RS14010 e3f24d571179c48125fe5f10bb63c14e 186 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 1.2E-17 T 23-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 RR42_RS14010 e3f24d571179c48125fe5f10bb63c14e 186 SMART SM00841 128 184 2.5E-28 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 RR42_RS14010 e3f24d571179c48125fe5f10bb63c14e 186 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 120 9.3E-18 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 RR42_RS14010 e3f24d571179c48125fe5f10bb63c14e 186 PANTHER PTHR30053 1 186 2.0E-67 T 23-04-2016 RR42_RS14010 e3f24d571179c48125fe5f10bb63c14e 186 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 23-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 RR42_RS14010 e3f24d571179c48125fe5f10bb63c14e 186 Gene3D G3DSA:2.40.50.140 127 185 7.9E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS14010 e3f24d571179c48125fe5f10bb63c14e 186 Gene3D G3DSA:2.40.50.140 65 126 4.0E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS14010 e3f24d571179c48125fe5f10bb63c14e 186 Hamap MF_00141 Elongation factor P [efp]. 1 185 46.953 T 23-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 RR42_RS14010 e3f24d571179c48125fe5f10bb63c14e 186 PIRSF PIRSF005901 1 186 1.7E-53 T 23-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 RR42_RS14010 e3f24d571179c48125fe5f10bb63c14e 186 Pfam PF09285 Elongation factor P, C-terminal 129 184 8.2E-24 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 RR42_RS14010 e3f24d571179c48125fe5f10bb63c14e 186 SUPERFAMILY SSF50104 1 63 4.86E-16 T 23-04-2016 IPR008991 Translation protein SH3-like domain RR42_RS14010 e3f24d571179c48125fe5f10bb63c14e 186 SUPERFAMILY SSF50249 65 126 9.0E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS16185 9717cf73c3e9f03602d19768a821dd82 482 PANTHER PTHR28641 164 463 1.2E-117 T 23-04-2016 RR42_RS16185 9717cf73c3e9f03602d19768a821dd82 482 Pfam PF05292 Malonyl-CoA decarboxylase (MCD) 137 455 9.4E-124 T 23-04-2016 IPR007956 Malonyl-CoA decarboxylase GO:0006633|GO:0050080 KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|UniPathway: UPA00340 RR42_RS00720 d60682e78f1d00cf1787fe290a16234e 413 Gene3D G3DSA:3.40.1090.10 8 227 5.2E-11 T 23-04-2016 RR42_RS00720 d60682e78f1d00cf1787fe290a16234e 413 Pfam PF01734 Patatin-like phospholipase 6 226 2.4E-19 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RR42_RS00720 d60682e78f1d00cf1787fe290a16234e 413 PANTHER PTHR14226:SF34 181 335 4.4E-61 T 23-04-2016 RR42_RS00720 d60682e78f1d00cf1787fe290a16234e 413 PANTHER PTHR14226:SF34 4 94 4.4E-61 T 23-04-2016 RR42_RS00720 d60682e78f1d00cf1787fe290a16234e 413 PANTHER PTHR14226:SF34 114 163 4.4E-61 T 23-04-2016 RR42_RS00720 d60682e78f1d00cf1787fe290a16234e 413 SUPERFAMILY SSF52151 3 296 1.46E-42 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RR42_RS00720 d60682e78f1d00cf1787fe290a16234e 413 PANTHER PTHR14226 4 94 4.4E-61 T 23-04-2016 RR42_RS00720 d60682e78f1d00cf1787fe290a16234e 413 PANTHER PTHR14226 114 163 4.4E-61 T 23-04-2016 RR42_RS00720 d60682e78f1d00cf1787fe290a16234e 413 PANTHER PTHR14226 181 335 4.4E-61 T 23-04-2016 RR42_RS17565 443c9458491504b3b59728cfe23aab06 329 PANTHER PTHR30118 1 314 3.5E-58 T 23-04-2016 RR42_RS17565 443c9458491504b3b59728cfe23aab06 329 SUPERFAMILY SSF53850 89 304 1.18E-32 T 23-04-2016 RR42_RS17565 443c9458491504b3b59728cfe23aab06 329 Gene3D G3DSA:3.40.190.10 173 274 1.8E-23 T 23-04-2016 RR42_RS17565 443c9458491504b3b59728cfe23aab06 329 SUPERFAMILY SSF46785 2 81 1.09E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS17565 443c9458491504b3b59728cfe23aab06 329 Pfam PF03466 LysR substrate binding domain 94 303 6.3E-20 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS17565 443c9458491504b3b59728cfe23aab06 329 Gene3D G3DSA:3.40.190.10 280 307 2.7E-16 T 23-04-2016 RR42_RS17565 443c9458491504b3b59728cfe23aab06 329 Gene3D G3DSA:3.40.190.10 89 172 2.7E-16 T 23-04-2016 RR42_RS17565 443c9458491504b3b59728cfe23aab06 329 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 2.3E-12 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS17565 443c9458491504b3b59728cfe23aab06 329 Gene3D G3DSA:1.10.10.10 3 81 4.7E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS06485 a1b2379ec0d396364fca4b3d8ec98803 372 Gene3D G3DSA:3.60.150.10 9 355 1.7E-153 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RR42_RS06485 a1b2379ec0d396364fca4b3d8ec98803 372 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RR42_RS06485 a1b2379ec0d396364fca4b3d8ec98803 372 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 35.977 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RR42_RS06485 a1b2379ec0d396364fca4b3d8ec98803 372 PANTHER PTHR21085 2 357 8.5E-200 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RR42_RS06485 a1b2379ec0d396364fca4b3d8ec98803 372 SUPERFAMILY SSF103263 4 354 2.88E-144 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RR42_RS06485 a1b2379ec0d396364fca4b3d8ec98803 372 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RR42_RS06485 a1b2379ec0d396364fca4b3d8ec98803 372 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RR42_RS06485 a1b2379ec0d396364fca4b3d8ec98803 372 PIRSF PIRSF001456 3 364 4.6E-134 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RR42_RS06485 a1b2379ec0d396364fca4b3d8ec98803 372 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 8.2E-140 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RR42_RS06485 a1b2379ec0d396364fca4b3d8ec98803 372 Pfam PF01264 Chorismate synthase 10 345 8.3E-136 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RR42_RS19735 11da58d5d7d5410777b5308db012b710 122 PANTHER PTHR34039:SF1 1 120 1.3E-40 T 23-04-2016 RR42_RS19735 11da58d5d7d5410777b5308db012b710 122 Pfam PF02021 Uncharacterised protein family UPF0102 11 103 3.7E-27 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 RR42_RS19735 11da58d5d7d5410777b5308db012b710 122 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 5 117 1.3E-31 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 RR42_RS19735 11da58d5d7d5410777b5308db012b710 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 4 117 23.186 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 RR42_RS19735 11da58d5d7d5410777b5308db012b710 122 Gene3D G3DSA:3.40.1350.10 11 118 6.3E-36 T 23-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 RR42_RS19735 11da58d5d7d5410777b5308db012b710 122 SUPERFAMILY SSF52980 6 115 2.68E-18 T 23-04-2016 IPR011335 Restriction endonuclease type II-like RR42_RS19735 11da58d5d7d5410777b5308db012b710 122 PANTHER PTHR34039 1 120 1.3E-40 T 23-04-2016 RR42_RS00645 58c16df4a540dc5bea88f4ba7736a43b 340 SUPERFAMILY SSF50891 187 300 2.28E-15 T 23-04-2016 IPR029000 Cyclophilin-like domain RR42_RS00645 58c16df4a540dc5bea88f4ba7736a43b 340 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 319 2.0E-105 T 23-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B RR42_RS00645 58c16df4a540dc5bea88f4ba7736a43b 340 PANTHER PTHR18866 154 339 7.0E-31 T 23-04-2016 RR42_RS00645 58c16df4a540dc5bea88f4ba7736a43b 340 Pfam PF02626 Allophanate hydrolase subunit 2 24 293 3.4E-91 T 23-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B RR42_RS00645 58c16df4a540dc5bea88f4ba7736a43b 340 Gene3D G3DSA:2.40.100.10 192 307 6.6E-9 T 23-04-2016 IPR029000 Cyclophilin-like domain RR42_RS00645 58c16df4a540dc5bea88f4ba7736a43b 340 SMART SM00797 23 310 3.0E-136 T 23-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B RR42_RS00645 58c16df4a540dc5bea88f4ba7736a43b 340 PANTHER PTHR18866:SF74 154 339 7.0E-31 T 23-04-2016 RR42_RS00940 b75441dcc5d12ec789daa882035cd02f 348 PIRSF PIRSF001619 20 347 2.2E-134 T 23-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RR42_RS00940 b75441dcc5d12ec789daa882035cd02f 348 TIGRFAM TIGR00433 bioB: biotin synthase 46 341 2.5E-123 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RR42_RS00940 b75441dcc5d12ec789daa882035cd02f 348 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 251 340 2.1E-18 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RR42_RS00940 b75441dcc5d12ec789daa882035cd02f 348 SMART SM00876 251 343 1.3E-44 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RR42_RS00940 b75441dcc5d12ec789daa882035cd02f 348 PANTHER PTHR22976 4 339 2.8E-163 T 23-04-2016 RR42_RS00940 b75441dcc5d12ec789daa882035cd02f 348 Hamap MF_01694 Biotin synthase [bioB]. 36 344 42.341 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RR42_RS00940 b75441dcc5d12ec789daa882035cd02f 348 PANTHER PTHR22976:SF19 4 339 2.8E-163 T 23-04-2016 RR42_RS00940 b75441dcc5d12ec789daa882035cd02f 348 SMART SM00729 74 286 3.5E-40 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RR42_RS00940 b75441dcc5d12ec789daa882035cd02f 348 Pfam PF04055 Radical SAM superfamily 81 229 1.4E-16 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RR42_RS00940 b75441dcc5d12ec789daa882035cd02f 348 SUPERFAMILY SSF102114 36 342 3.53E-92 T 23-04-2016 RR42_RS00940 b75441dcc5d12ec789daa882035cd02f 348 Gene3D G3DSA:3.20.20.70 37 342 5.7E-104 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS05550 6a322ec43ed1716cacb6feb5a8fa229c 163 Gene3D G3DSA:1.10.1060.10 18 129 3.5E-22 T 23-04-2016 RR42_RS05550 6a322ec43ed1716cacb6feb5a8fa229c 163 PANTHER PTHR10849:SF20 4 163 4.4E-85 T 23-04-2016 RR42_RS05550 6a322ec43ed1716cacb6feb5a8fa229c 163 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 11 160 28.061 T 23-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 RR42_RS05550 6a322ec43ed1716cacb6feb5a8fa229c 163 Pfam PF12838 4Fe-4S dicluster domain 63 117 4.7E-12 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RR42_RS05550 6a322ec43ed1716cacb6feb5a8fa229c 163 PANTHER PTHR10849 4 163 4.4E-85 T 23-04-2016 RR42_RS05550 6a322ec43ed1716cacb6feb5a8fa229c 163 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 20 141 6.8E-46 T 23-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 RR42_RS05550 6a322ec43ed1716cacb6feb5a8fa229c 163 SUPERFAMILY SSF54862 37 146 5.86E-26 T 23-04-2016 RR42_RS05550 6a322ec43ed1716cacb6feb5a8fa229c 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 64 75 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RR42_RS05550 6a322ec43ed1716cacb6feb5a8fa229c 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 103 114 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RR42_RS19850 9d13f204c8c1d3f81a7b1fee97c63608 591 SUPERFAMILY SSF52518 1 184 8.1E-49 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS19850 9d13f204c8c1d3f81a7b1fee97c63608 591 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 328 4.0E-36 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RR42_RS19850 9d13f204c8c1d3f81a7b1fee97c63608 591 PANTHER PTHR18968 1 579 0.0 T 23-04-2016 RR42_RS19850 9d13f204c8c1d3f81a7b1fee97c63608 591 Gene3D G3DSA:3.40.50.970 3 181 2.3E-62 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS19850 9d13f204c8c1d3f81a7b1fee97c63608 591 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 553 5.0E-36 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RR42_RS19850 9d13f204c8c1d3f81a7b1fee97c63608 591 SUPERFAMILY SSF52467 186 376 5.39E-48 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RR42_RS19850 9d13f204c8c1d3f81a7b1fee97c63608 591 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 172 6.2E-52 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RR42_RS19850 9d13f204c8c1d3f81a7b1fee97c63608 591 PANTHER PTHR18968:SF14 1 579 0.0 T 23-04-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 RR42_RS19850 9d13f204c8c1d3f81a7b1fee97c63608 591 Gene3D G3DSA:3.40.50.970 361 587 5.8E-62 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS19850 9d13f204c8c1d3f81a7b1fee97c63608 591 Gene3D G3DSA:3.40.50.1220 185 336 9.6E-50 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RR42_RS19850 9d13f204c8c1d3f81a7b1fee97c63608 591 SUPERFAMILY SSF52518 369 565 2.58E-52 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS19850 9d13f204c8c1d3f81a7b1fee97c63608 591 TIGRFAM TIGR01504 glyox_carbo_lig: glyoxylate carboligase 3 580 0.0 T 23-04-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 PANTHER PTHR10133:SF27 321 936 0.0 T 23-04-2016 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 PANTHER PTHR10133:SF27 1 283 0.0 T 23-04-2016 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 SMART SM00475 4 260 1.1E-113 T 23-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 Pfam PF01612 3'-5' exonuclease 335 526 5.7E-41 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 SUPERFAMILY SSF56672 534 937 2.11E-156 T 23-04-2016 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 170 258 5.4E-24 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 Gene3D G3DSA:3.40.50.1010 6 184 2.2E-68 T 23-04-2016 IPR029060 PIN domain-like RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 Gene3D G3DSA:3.30.70.370 672 720 1.0E-65 T 23-04-2016 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 Gene3D G3DSA:3.30.70.370 827 937 1.0E-65 T 23-04-2016 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 TIGRFAM TIGR00593 pola: DNA polymerase I 8 937 2.0E-273 T 23-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 ProSitePatterns PS00447 DNA polymerase family A signature. 763 782 - T 23-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 Pfam PF00476 DNA polymerase family A 560 935 4.0E-151 T 23-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 SUPERFAMILY SSF47807 170 286 2.99E-30 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 800 811 1.2E-75 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 854 870 1.2E-75 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 739 752 1.2E-75 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 884 897 1.2E-75 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 687 702 1.2E-75 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 763 788 1.2E-75 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 709 732 1.2E-75 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 664 686 1.2E-75 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 822 833 1.2E-75 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 SUPERFAMILY SSF53098 338 526 3.64E-51 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 8 169 6.6E-52 T 23-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 SMART SM00482 695 901 1.6E-113 T 23-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 SMART SM00474 335 526 4.8E-35 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 SMART SM00279 172 207 8.4E-11 T 23-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 Gene3D G3DSA:1.10.150.20 185 245 3.9E-23 T 23-04-2016 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 PANTHER PTHR10133 321 936 0.0 T 23-04-2016 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 PANTHER PTHR10133 1 283 0.0 T 23-04-2016 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 SUPERFAMILY SSF88723 3 169 8.41E-57 T 23-04-2016 IPR029060 PIN domain-like RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 Gene3D G3DSA:1.10.150.20 721 826 1.7E-35 T 23-04-2016 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 Gene3D G3DSA:3.30.420.10 333 551 9.6E-79 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS15050 c04b4a98dab1354f8ef09f7a9f7261c4 937 Gene3D G3DSA:1.20.1060.10 552 671 7.6E-36 T 23-04-2016 RR42_RS13790 d8bf546ee965874a646219aec094d7f1 366 Gene3D G3DSA:3.40.50.300 3 225 4.9E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13790 d8bf546ee965874a646219aec094d7f1 366 Gene3D G3DSA:2.40.50.140 280 334 1.3E-8 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS13790 d8bf546ee965874a646219aec094d7f1 366 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS13790 d8bf546ee965874a646219aec094d7f1 366 SUPERFAMILY SSF52540 4 238 4.6E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13790 d8bf546ee965874a646219aec094d7f1 366 Gene3D G3DSA:2.40.50.100 335 348 8.5E-4 T 23-04-2016 RR42_RS13790 d8bf546ee965874a646219aec094d7f1 366 Gene3D G3DSA:2.40.50.100 248 276 8.5E-4 T 23-04-2016 RR42_RS13790 d8bf546ee965874a646219aec094d7f1 366 SMART SM00382 27 210 2.4E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS13790 d8bf546ee965874a646219aec094d7f1 366 SUPERFAMILY SSF50331 234 348 4.82E-22 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RR42_RS13790 d8bf546ee965874a646219aec094d7f1 366 PANTHER PTHR24220 4 239 1.4E-90 T 23-04-2016 RR42_RS13790 d8bf546ee965874a646219aec094d7f1 366 Pfam PF08402 TOBE domain 270 341 1.5E-4 T 23-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 RR42_RS13790 d8bf546ee965874a646219aec094d7f1 366 Pfam PF00005 ABC transporter 21 158 8.1E-26 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS13790 d8bf546ee965874a646219aec094d7f1 366 PANTHER PTHR24220:SF282 4 239 1.4E-90 T 23-04-2016 RR42_RS37735 98e3176f7e8a29fd2cb9c94d64ea3b4d 91 Gene3D G3DSA:3.30.70.900 2 87 1.8E-24 T 23-04-2016 RR42_RS37735 98e3176f7e8a29fd2cb9c94d64ea3b4d 91 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 73 1.3E-20 T 23-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain RR42_RS37735 98e3176f7e8a29fd2cb9c94d64ea3b4d 91 PANTHER PTHR33336 1 81 8.8E-18 T 23-04-2016 RR42_RS37735 98e3176f7e8a29fd2cb9c94d64ea3b4d 91 PANTHER PTHR33336:SF5 1 81 8.8E-18 T 23-04-2016 RR42_RS37735 98e3176f7e8a29fd2cb9c94d64ea3b4d 91 SUPERFAMILY SSF54909 1 90 2.05E-24 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RR42_RS15030 8044e64115aa6c977e59f1aa30baa754 285 SUPERFAMILY SSF52821 162 284 3.8E-30 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS15030 8044e64115aa6c977e59f1aa30baa754 285 PANTHER PTHR11364 1 284 1.0E-88 T 23-04-2016 RR42_RS15030 8044e64115aa6c977e59f1aa30baa754 285 ProSitePatterns PS00683 Rhodanese C-terminal signature. 263 273 - T 23-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 RR42_RS15030 8044e64115aa6c977e59f1aa30baa754 285 Pfam PF00581 Rhodanese-like domain 9 130 4.9E-16 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS15030 8044e64115aa6c977e59f1aa30baa754 285 Pfam PF00581 Rhodanese-like domain 164 275 2.9E-7 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS15030 8044e64115aa6c977e59f1aa30baa754 285 SMART SM00450 8 134 6.2E-21 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS15030 8044e64115aa6c977e59f1aa30baa754 285 SMART SM00450 159 279 9.5E-10 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS15030 8044e64115aa6c977e59f1aa30baa754 285 Gene3D G3DSA:3.40.250.10 2 143 2.4E-46 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS15030 8044e64115aa6c977e59f1aa30baa754 285 Gene3D G3DSA:3.40.250.10 154 284 2.2E-34 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS15030 8044e64115aa6c977e59f1aa30baa754 285 PANTHER PTHR11364:SF0 1 284 1.0E-88 T 23-04-2016 RR42_RS15030 8044e64115aa6c977e59f1aa30baa754 285 ProSitePatterns PS00380 Rhodanese signature 1. 41 52 - T 23-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 RR42_RS15030 8044e64115aa6c977e59f1aa30baa754 285 SUPERFAMILY SSF52821 3 147 2.36E-39 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS18170 2f1291f990d0d878e95f370e72553dbc 424 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 57 73 2.4E-5 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RR42_RS18170 2f1291f990d0d878e95f370e72553dbc 424 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 35 51 2.4E-5 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RR42_RS18170 2f1291f990d0d878e95f370e72553dbc 424 Gene3D G3DSA:3.40.50.2300 34 244 7.9E-37 T 23-04-2016 RR42_RS18170 2f1291f990d0d878e95f370e72553dbc 424 Pfam PF13458 Periplasmic binding protein 34 385 3.8E-57 T 23-04-2016 IPR028081 Leucine-binding protein domain RR42_RS18170 2f1291f990d0d878e95f370e72553dbc 424 SUPERFAMILY SSF53822 34 390 2.42E-58 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RR42_RS18170 2f1291f990d0d878e95f370e72553dbc 424 PANTHER PTHR30483 30 420 2.0E-37 T 23-04-2016 RR42_RS20675 7785b606584103c492a49760f2c125cd 152 Pfam PF01037 Lrp/AsnC ligand binding domain 69 135 1.1E-11 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RR42_RS20675 7785b606584103c492a49760f2c125cd 152 Gene3D G3DSA:1.10.10.10 1 54 5.4E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS20675 7785b606584103c492a49760f2c125cd 152 PANTHER PTHR30154 1 139 9.5E-40 T 23-04-2016 RR42_RS20675 7785b606584103c492a49760f2c125cd 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 4.2E-15 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS20675 7785b606584103c492a49760f2c125cd 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 4.2E-15 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS20675 7785b606584103c492a49760f2c125cd 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 4.2E-15 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS20675 7785b606584103c492a49760f2c125cd 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 1.2E-14 T 23-04-2016 RR42_RS20675 7785b606584103c492a49760f2c125cd 152 SUPERFAMILY SSF54909 64 138 7.11E-14 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RR42_RS20675 7785b606584103c492a49760f2c125cd 152 Gene3D G3DSA:3.30.70.920 56 130 3.3E-14 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RR42_RS20675 7785b606584103c492a49760f2c125cd 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 23-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RR42_RS20675 7785b606584103c492a49760f2c125cd 152 SMART SM00344 3 109 1.8E-31 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RR42_RS20675 7785b606584103c492a49760f2c125cd 152 SUPERFAMILY SSF46785 2 62 1.85E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS16430 3f34bbcb47ad7fc3f3dc7d20e30ad074 113 Pfam PF01609 Transposase DDE domain 3 100 6.7E-10 T 23-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RR42_RS16430 3f34bbcb47ad7fc3f3dc7d20e30ad074 113 PANTHER PTHR35604 1 112 8.8E-39 T 23-04-2016 RR42_RS16430 3f34bbcb47ad7fc3f3dc7d20e30ad074 113 PANTHER PTHR35604:SF2 1 112 8.8E-39 T 23-04-2016 RR42_RS17030 5c2844c0b39ac6b730a3f18c62be69b8 467 SUPERFAMILY SSF82689 336 435 1.44E-22 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 RR42_RS17030 5c2844c0b39ac6b730a3f18c62be69b8 467 SUPERFAMILY SSF50182 270 334 2.65E-12 T 23-04-2016 IPR010920 LSM domain RR42_RS17030 5c2844c0b39ac6b730a3f18c62be69b8 467 SUPERFAMILY SSF82861 184 268 3.66E-11 T 23-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 RR42_RS17030 5c2844c0b39ac6b730a3f18c62be69b8 467 Gene3D G3DSA:3.30.70.100 338 424 6.2E-13 T 23-04-2016 RR42_RS17030 5c2844c0b39ac6b730a3f18c62be69b8 467 PANTHER PTHR30347 32 458 2.4E-72 T 23-04-2016 RR42_RS17030 5c2844c0b39ac6b730a3f18c62be69b8 467 Pfam PF00924 Mechanosensitive ion channel 228 426 2.4E-42 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RR42_RS17030 5c2844c0b39ac6b730a3f18c62be69b8 467 Gene3D G3DSA:2.30.30.60 286 333 5.1E-10 T 23-04-2016 RR42_RS00485 c8128c5940e318ec07ef1b19cf1de464 741 Pfam PF00122 E1-E2 ATPase 113 347 2.6E-37 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RR42_RS00485 c8128c5940e318ec07ef1b19cf1de464 741 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 598 610 6.3E-24 T 23-04-2016 RR42_RS00485 c8128c5940e318ec07ef1b19cf1de464 741 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 522 532 6.3E-24 T 23-04-2016 RR42_RS00485 c8128c5940e318ec07ef1b19cf1de464 741 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 356 370 6.3E-24 T 23-04-2016 RR42_RS00485 c8128c5940e318ec07ef1b19cf1de464 741 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 199 213 6.3E-24 T 23-04-2016 RR42_RS00485 c8128c5940e318ec07ef1b19cf1de464 741 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 575 594 6.3E-24 T 23-04-2016 RR42_RS00485 c8128c5940e318ec07ef1b19cf1de464 741 SUPERFAMILY SSF81653 163 252 1.7E-19 T 23-04-2016 RR42_RS00485 c8128c5940e318ec07ef1b19cf1de464 741 PANTHER PTHR24093 684 735 0.0 T 23-04-2016 RR42_RS00485 c8128c5940e318ec07ef1b19cf1de464 741 PANTHER PTHR24093 50 646 0.0 T 23-04-2016 RR42_RS00485 c8128c5940e318ec07ef1b19cf1de464 741 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 358 364 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site RR42_RS00485 c8128c5940e318ec07ef1b19cf1de464 741 Gene3D G3DSA:2.70.150.10 106 253 4.3E-21 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RR42_RS00485 c8128c5940e318ec07ef1b19cf1de464 741 SUPERFAMILY SSF81665 66 144 2.22E-12 T 23-04-2016 RR42_RS00485 c8128c5940e318ec07ef1b19cf1de464 741 SUPERFAMILY SSF81665 253 350 2.22E-12 T 23-04-2016 RR42_RS00485 c8128c5940e318ec07ef1b19cf1de464 741 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 45 736 0.0 T 23-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 RR42_RS00485 c8128c5940e318ec07ef1b19cf1de464 741 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 113 394 2.3E-30 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 RR42_RS00485 c8128c5940e318ec07ef1b19cf1de464 741 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 426 660 2.9E-41 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 RR42_RS00485 c8128c5940e318ec07ef1b19cf1de464 741 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 46 739 40.684 T 23-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 RR42_RS00485 c8128c5940e318ec07ef1b19cf1de464 741 SUPERFAMILY SSF56784 403 459 1.34E-36 T 23-04-2016 IPR023214 HAD-like domain RR42_RS00485 c8128c5940e318ec07ef1b19cf1de464 741 SUPERFAMILY SSF56784 344 368 1.34E-36 T 23-04-2016 IPR023214 HAD-like domain RR42_RS00485 c8128c5940e318ec07ef1b19cf1de464 741 SUPERFAMILY SSF56784 498 618 1.34E-36 T 23-04-2016 IPR023214 HAD-like domain RR42_RS00485 c8128c5940e318ec07ef1b19cf1de464 741 Pfam PF00702 haloacid dehalogenase-like hydrolase 352 589 1.6E-32 T 23-04-2016 RR42_RS00485 c8128c5940e318ec07ef1b19cf1de464 741 Gene3D G3DSA:3.40.1110.10 369 507 1.2E-46 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RR42_RS00485 c8128c5940e318ec07ef1b19cf1de464 741 PANTHER PTHR24093:SF49 684 735 0.0 T 23-04-2016 RR42_RS00485 c8128c5940e318ec07ef1b19cf1de464 741 PANTHER PTHR24093:SF49 50 646 0.0 T 23-04-2016 RR42_RS00485 c8128c5940e318ec07ef1b19cf1de464 741 Gene3D G3DSA:3.40.50.1000 508 623 3.9E-35 T 23-04-2016 IPR023214 HAD-like domain RR42_RS00485 c8128c5940e318ec07ef1b19cf1de464 741 Gene3D G3DSA:3.40.50.1000 342 368 3.9E-35 T 23-04-2016 IPR023214 HAD-like domain RR42_RS20205 6e3b41069b45e88079f60e2f095eea3f 257 Pfam PF13614 AAA domain 3 178 6.8E-65 T 23-04-2016 IPR025669 AAA domain RR42_RS20205 6e3b41069b45e88079f60e2f095eea3f 257 PANTHER PTHR13696 1 255 6.1E-88 T 23-04-2016 RR42_RS20205 6e3b41069b45e88079f60e2f095eea3f 257 Gene3D G3DSA:3.40.50.300 3 255 3.4E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20205 6e3b41069b45e88079f60e2f095eea3f 257 SUPERFAMILY SSF52540 1 254 4.11E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20205 6e3b41069b45e88079f60e2f095eea3f 257 PANTHER PTHR13696:SF52 1 255 6.1E-88 T 23-04-2016 RR42_RS17205 59f622cd1f920bb852074db425e13a0b 680 Pfam PF08676 MutL C terminal dimerisation domain 489 636 5.9E-48 T 23-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 RR42_RS17205 59f622cd1f920bb852074db425e13a0b 680 Gene3D G3DSA:3.30.565.10 14 221 1.0E-69 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS17205 59f622cd1f920bb852074db425e13a0b 680 Gene3D G3DSA:3.30.230.10 222 332 1.3E-36 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RR42_RS17205 59f622cd1f920bb852074db425e13a0b 680 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 105 111 - T 23-04-2016 IPR014762 DNA mismatch repair, conserved site RR42_RS17205 59f622cd1f920bb852074db425e13a0b 680 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 36 137 2.7E-10 T 23-04-2016 RR42_RS17205 59f622cd1f920bb852074db425e13a0b 680 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 13 676 28.271 T 23-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 RR42_RS17205 59f622cd1f920bb852074db425e13a0b 680 SUPERFAMILY SSF55874 14 209 2.49E-52 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS17205 59f622cd1f920bb852074db425e13a0b 680 SMART SM01340 216 334 8.6E-57 T 23-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 RR42_RS17205 59f622cd1f920bb852074db425e13a0b 680 SUPERFAMILY SSF118116 489 678 1.06E-59 T 23-04-2016 RR42_RS17205 59f622cd1f920bb852074db425e13a0b 680 PANTHER PTHR10073 15 676 1.0E-159 T 23-04-2016 RR42_RS17205 59f622cd1f920bb852074db425e13a0b 680 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 217 333 3.4E-37 T 23-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 RR42_RS17205 59f622cd1f920bb852074db425e13a0b 680 SUPERFAMILY SSF54211 199 334 2.09E-36 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RR42_RS17205 59f622cd1f920bb852074db425e13a0b 680 SMART SM00853 493 636 9.0E-54 T 23-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 RR42_RS17205 59f622cd1f920bb852074db425e13a0b 680 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 14 314 1.5E-91 T 23-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 RR42_RS09260 a4656b1cd60329c85e9190b0813bddc9 188 Gene3D G3DSA:1.10.357.10 4 184 2.7E-32 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS09260 a4656b1cd60329c85e9190b0813bddc9 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 5.9E-10 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS09260 a4656b1cd60329c85e9190b0813bddc9 188 PANTHER PTHR30055 6 188 7.4E-26 T 23-04-2016 RR42_RS09260 a4656b1cd60329c85e9190b0813bddc9 188 PANTHER PTHR30055:SF68 6 188 7.4E-26 T 23-04-2016 RR42_RS09260 a4656b1cd60329c85e9190b0813bddc9 188 SUPERFAMILY SSF46689 3 77 5.49E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS09260 a4656b1cd60329c85e9190b0813bddc9 188 SUPERFAMILY SSF48498 77 184 5.56E-19 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 SUPERFAMILY SSF54211 484 605 1.09E-43 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 186 4.1E-30 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 PANTHER PTHR23115:SF66 6 184 0.0 T 23-04-2016 RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 SMART SM00838 606 694 1.4E-56 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 4.3E-65 T 23-04-2016 RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 SUPERFAMILY SSF52540 6 288 2.36E-106 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.3E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.3E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.3E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.3E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.3E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 Hamap MF_00054_B Elongation factor G [fusA]. 6 698 110.198 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 SUPERFAMILY SSF54980 609 696 1.06E-29 T 23-04-2016 IPR009022 Elongation factor G, III-V domain RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 Pfam PF00679 Elongation factor G C-terminus 606 693 1.6E-32 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 SMART SM00889 485 604 1.9E-75 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 Pfam PF03144 Elongation factor Tu domain 2 329 396 5.5E-18 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 Gene3D G3DSA:3.40.50.300 6 293 5.6E-103 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 Gene3D G3DSA:2.40.30.10 312 409 1.2E-36 T 23-04-2016 RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 PANTHER PTHR23115 261 289 0.0 T 23-04-2016 RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 SUPERFAMILY SSF54980 409 486 7.91E-26 T 23-04-2016 IPR009022 Elongation factor G, III-V domain RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 Gene3D G3DSA:3.30.230.10 489 604 3.1E-50 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 SUPERFAMILY SSF50447 271 407 4.95E-34 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 PANTHER PTHR23115 308 698 0.0 T 23-04-2016 RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 Pfam PF03764 Elongation factor G, domain IV 484 604 7.5E-48 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 Pfam PF14492 Elongation Factor G, domain II 409 483 1.4E-35 T 23-04-2016 IPR009022 Elongation factor G, III-V domain RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 Gene3D G3DSA:3.30.70.240 605 692 1.6E-34 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 PANTHER PTHR23115:SF66 308 698 0.0 T 23-04-2016 RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 PANTHER PTHR23115 6 184 0.0 T 23-04-2016 RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 Gene3D G3DSA:3.30.70.870 410 485 1.2E-39 T 23-04-2016 RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 698 0.0 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 PANTHER PTHR23115:SF66 261 289 0.0 T 23-04-2016 RR42_RS19295 d7bf0efddea259da10e1f6d24db71d56 700 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site RR42_RS11095 90eb0683d8f87fdb03b4070dcdbf1267 693 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 295 470 1.1E-61 T 23-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RR42_RS11095 90eb0683d8f87fdb03b4070dcdbf1267 693 SUPERFAMILY SSF48179 597 691 1.53E-23 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RR42_RS11095 90eb0683d8f87fdb03b4070dcdbf1267 693 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 603 689 1.7E-7 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RR42_RS11095 90eb0683d8f87fdb03b4070dcdbf1267 693 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 475 567 1.4E-22 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RR42_RS11095 90eb0683d8f87fdb03b4070dcdbf1267 693 SUPERFAMILY SSF51735 291 470 2.28E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS11095 90eb0683d8f87fdb03b4070dcdbf1267 693 PANTHER PTHR23309 1 688 0.0 T 23-04-2016 RR42_RS11095 90eb0683d8f87fdb03b4070dcdbf1267 693 Gene3D G3DSA:1.10.1040.10 609 690 6.8E-17 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RR42_RS11095 90eb0683d8f87fdb03b4070dcdbf1267 693 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 177 2.0E-34 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RR42_RS11095 90eb0683d8f87fdb03b4070dcdbf1267 693 Gene3D G3DSA:3.40.50.720 289 476 1.5E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS11095 90eb0683d8f87fdb03b4070dcdbf1267 693 SUPERFAMILY SSF52096 4 286 8.66E-60 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS11095 90eb0683d8f87fdb03b4070dcdbf1267 693 Gene3D G3DSA:3.90.226.10 3 277 6.0E-57 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS11095 90eb0683d8f87fdb03b4070dcdbf1267 693 Gene3D G3DSA:1.10.1040.10 477 568 2.3E-18 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RR42_RS11095 90eb0683d8f87fdb03b4070dcdbf1267 693 SUPERFAMILY SSF48179 474 616 8.25E-26 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RR42_RS11095 90eb0683d8f87fdb03b4070dcdbf1267 693 PANTHER PTHR23309:SF9 1 688 0.0 T 23-04-2016 RR42_RS04470 51afe67f7639d02548f857087c7f6f57 302 Pfam PF02153 Prephenate dehydrogenase 25 281 5.1E-71 T 23-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 RR42_RS04470 51afe67f7639d02548f857087c7f6f57 302 SUPERFAMILY SSF51735 12 178 2.43E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS04470 51afe67f7639d02548f857087c7f6f57 302 Gene3D G3DSA:3.40.50.720 11 188 8.3E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS04470 51afe67f7639d02548f857087c7f6f57 302 PANTHER PTHR21363:SF0 1 295 1.6E-65 T 23-04-2016 RR42_RS04470 51afe67f7639d02548f857087c7f6f57 302 SUPERFAMILY SSF48179 183 290 5.21E-35 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RR42_RS04470 51afe67f7639d02548f857087c7f6f57 302 PANTHER PTHR21363 1 295 1.6E-65 T 23-04-2016 RR42_RS16320 ab5ec7badc132c0fe396f02829ca6478 793 PANTHER PTHR32305 1 454 2.0E-123 T 23-04-2016 RR42_RS16320 ab5ec7badc132c0fe396f02829ca6478 793 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 576 724 2.4E-49 T 23-04-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal RR42_RS16320 ab5ec7badc132c0fe396f02829ca6478 793 PANTHER PTHR32305:SF9 1 454 2.0E-123 T 23-04-2016 RR42_RS16320 ab5ec7badc132c0fe396f02829ca6478 793 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 441 544 9.1E-30 T 23-04-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain RR42_RS16320 ab5ec7badc132c0fe396f02829ca6478 793 SUPERFAMILY SSF69279 153 331 3.23E-41 T 23-04-2016 RR42_RS16320 ab5ec7badc132c0fe396f02829ca6478 793 SUPERFAMILY SSF69349 671 713 1.65E-8 T 23-04-2016 RR42_RS16320 ab5ec7badc132c0fe396f02829ca6478 793 SUPERFAMILY SSF69349 408 513 1.65E-8 T 23-04-2016 RR42_RS16320 ab5ec7badc132c0fe396f02829ca6478 793 SUPERFAMILY SSF69279 2 145 1.28E-40 T 23-04-2016 RR42_RS16320 ab5ec7badc132c0fe396f02829ca6478 793 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 2 468 1.2E-107 T 23-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein RR42_RS16320 ab5ec7badc132c0fe396f02829ca6478 793 SUPERFAMILY SSF69255 330 418 1.44E-28 T 23-04-2016 RR42_RS16320 ab5ec7badc132c0fe396f02829ca6478 793 Pfam PF05954 Phage late control gene D protein (GPD) 2 297 6.2E-87 T 23-04-2016 RR42_RS16320 ab5ec7badc132c0fe396f02829ca6478 793 Gene3D G3DSA:3.55.50.10 58 149 5.9E-30 T 23-04-2016 RR42_RS16320 ab5ec7badc132c0fe396f02829ca6478 793 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 27 466 2.1E-125 T 23-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset RR42_RS16320 ab5ec7badc132c0fe396f02829ca6478 793 Gene3D G3DSA:2.40.50.230 337 418 1.5E-31 T 23-04-2016 IPR006531 Gp5 N-terminal RR42_RS05125 dc7b64ce472f23f516f504ece3f8ce4a 194 Pfam PF00881 Nitroreductase family 15 171 3.1E-11 T 23-04-2016 IPR029479 Nitroreductase RR42_RS05125 dc7b64ce472f23f516f504ece3f8ce4a 194 SUPERFAMILY SSF55469 10 185 5.5E-39 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 RR42_RS05125 dc7b64ce472f23f516f504ece3f8ce4a 194 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 1 194 41.695 T 23-04-2016 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 RR42_RS05125 dc7b64ce472f23f516f504ece3f8ce4a 194 PANTHER PTHR23026 1 190 8.5E-67 T 23-04-2016 RR42_RS05125 dc7b64ce472f23f516f504ece3f8ce4a 194 PANTHER PTHR23026:SF110 1 190 8.5E-67 T 23-04-2016 RR42_RS05125 dc7b64ce472f23f516f504ece3f8ce4a 194 Gene3D G3DSA:3.40.109.10 2 192 1.9E-34 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 RR42_RS18570 9f4ffaa774ae945864eed22ef85f1acd 390 Gene3D G3DSA:3.30.420.10 140 298 6.0E-28 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS18570 9f4ffaa774ae945864eed22ef85f1acd 390 SUPERFAMILY SSF53098 142 307 1.01E-27 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS18570 9f4ffaa774ae945864eed22ef85f1acd 390 Pfam PF13565 Homeodomain-like domain 39 115 8.1E-15 T 23-04-2016 RR42_RS18570 9f4ffaa774ae945864eed22ef85f1acd 390 Pfam PF00665 Integrase core domain 141 260 5.0E-17 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RR42_RS18570 9f4ffaa774ae945864eed22ef85f1acd 390 Gene3D G3DSA:1.10.10.60 24 68 2.8E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS18570 9f4ffaa774ae945864eed22ef85f1acd 390 SUPERFAMILY SSF46689 8 119 2.51E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS03240 9f4ffaa774ae945864eed22ef85f1acd 390 Gene3D G3DSA:3.30.420.10 140 298 6.0E-28 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS03240 9f4ffaa774ae945864eed22ef85f1acd 390 SUPERFAMILY SSF53098 142 307 1.01E-27 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS03240 9f4ffaa774ae945864eed22ef85f1acd 390 Pfam PF13565 Homeodomain-like domain 39 115 8.1E-15 T 23-04-2016 RR42_RS03240 9f4ffaa774ae945864eed22ef85f1acd 390 Pfam PF00665 Integrase core domain 141 260 5.0E-17 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RR42_RS03240 9f4ffaa774ae945864eed22ef85f1acd 390 Gene3D G3DSA:1.10.10.60 24 68 2.8E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS03240 9f4ffaa774ae945864eed22ef85f1acd 390 SUPERFAMILY SSF46689 8 119 2.51E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS09695 f8f2324fa04a223b8461091e1dd0e29a 259 SUPERFAMILY SSF49584 157 249 8.5E-12 T 23-04-2016 IPR016148 Pili assembly chaperone, C-terminal RR42_RS09695 f8f2324fa04a223b8461091e1dd0e29a 259 PANTHER PTHR30251 5 256 1.3E-82 T 23-04-2016 RR42_RS09695 f8f2324fa04a223b8461091e1dd0e29a 259 Gene3D G3DSA:2.60.40.360 33 155 3.0E-44 T 23-04-2016 IPR008962 PapD-like RR42_RS09695 f8f2324fa04a223b8461091e1dd0e29a 259 Gene3D G3DSA:2.60.40.1070 158 248 5.4E-13 T 23-04-2016 IPR016148 Pili assembly chaperone, C-terminal RR42_RS09695 f8f2324fa04a223b8461091e1dd0e29a 259 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 110 127 - T 23-04-2016 IPR018046 Pili assembly chaperone, conserved site RR42_RS09695 f8f2324fa04a223b8461091e1dd0e29a 259 SUPERFAMILY SSF49354 28 155 5.76E-43 T 23-04-2016 IPR008962 PapD-like RR42_RS09695 f8f2324fa04a223b8461091e1dd0e29a 259 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 185 247 5.0E-14 T 23-04-2016 IPR016148 Pili assembly chaperone, C-terminal RR42_RS09695 f8f2324fa04a223b8461091e1dd0e29a 259 PANTHER PTHR30251:SF2 5 256 1.3E-82 T 23-04-2016 RR42_RS09695 f8f2324fa04a223b8461091e1dd0e29a 259 PRINTS PR00969 Pili chaperone signature 178 193 1.4E-29 T 23-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RR42_RS09695 f8f2324fa04a223b8461091e1dd0e29a 259 PRINTS PR00969 Pili chaperone signature 83 104 1.4E-29 T 23-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RR42_RS09695 f8f2324fa04a223b8461091e1dd0e29a 259 PRINTS PR00969 Pili chaperone signature 111 128 1.4E-29 T 23-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RR42_RS09695 f8f2324fa04a223b8461091e1dd0e29a 259 PRINTS PR00969 Pili chaperone signature 137 152 1.4E-29 T 23-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RR42_RS09695 f8f2324fa04a223b8461091e1dd0e29a 259 PRINTS PR00969 Pili chaperone signature 34 43 1.4E-29 T 23-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RR42_RS09695 f8f2324fa04a223b8461091e1dd0e29a 259 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 34 155 2.3E-42 T 23-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 RR42_RS07645 80faf03b4a1720c758ca3bb362795d29 394 PANTHER PTHR18919 1 394 2.4E-195 T 23-04-2016 RR42_RS07645 80faf03b4a1720c758ca3bb362795d29 394 Pfam PF02803 Thiolase, C-terminal domain 271 393 7.1E-47 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RR42_RS07645 80faf03b4a1720c758ca3bb362795d29 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 23-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 RR42_RS07645 80faf03b4a1720c758ca3bb362795d29 394 SUPERFAMILY SSF53901 4 271 4.01E-83 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS07645 80faf03b4a1720c758ca3bb362795d29 394 PANTHER PTHR18919:SF95 1 394 2.4E-195 T 23-04-2016 RR42_RS07645 80faf03b4a1720c758ca3bb362795d29 394 Gene3D G3DSA:3.40.47.10 144 194 4.7E-65 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS07645 80faf03b4a1720c758ca3bb362795d29 394 Gene3D G3DSA:3.40.47.10 278 393 4.7E-65 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS07645 80faf03b4a1720c758ca3bb362795d29 394 Pfam PF00108 Thiolase, N-terminal domain 5 263 1.1E-91 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RR42_RS07645 80faf03b4a1720c758ca3bb362795d29 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 392 1.4E-140 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RR42_RS07645 80faf03b4a1720c758ca3bb362795d29 394 PIRSF PIRSF000429 1 394 4.9E-129 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RR42_RS07645 80faf03b4a1720c758ca3bb362795d29 394 Gene3D G3DSA:3.40.47.10 4 125 3.3E-68 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS07645 80faf03b4a1720c758ca3bb362795d29 394 Gene3D G3DSA:3.40.47.10 195 276 3.3E-68 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS07645 80faf03b4a1720c758ca3bb362795d29 394 SUPERFAMILY SSF53901 272 393 1.47E-44 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS07645 80faf03b4a1720c758ca3bb362795d29 394 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 23-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RR42_RS19485 92f8a7631727814f1a8b71787d5dd277 164 Pfam PF12019 Type II transport protein GspH 54 102 2.3E-4 T 23-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RR42_RS19485 92f8a7631727814f1a8b71787d5dd277 164 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 13 157 9.8E-21 T 23-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 RR42_RS19485 92f8a7631727814f1a8b71787d5dd277 164 SUPERFAMILY SSF54523 18 98 1.1E-10 T 23-04-2016 RR42_RS19485 92f8a7631727814f1a8b71787d5dd277 164 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 37 1.1E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS19485 92f8a7631727814f1a8b71787d5dd277 164 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 16 36 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS19485 92f8a7631727814f1a8b71787d5dd277 164 Gene3D G3DSA:3.55.40.10 52 109 1.1E-5 T 23-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RR42_RS19485 92f8a7631727814f1a8b71787d5dd277 164 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 13 36 2.2E-8 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS09330 272a21bc4de8a26481c7a818f0367db6 284 PANTHER PTHR24321:SF6 23 281 1.9E-44 T 23-04-2016 RR42_RS09330 272a21bc4de8a26481c7a818f0367db6 284 PANTHER PTHR24321 23 281 1.9E-44 T 23-04-2016 RR42_RS09330 272a21bc4de8a26481c7a818f0367db6 284 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 40 280 1.8E-59 T 23-04-2016 RR42_RS09330 272a21bc4de8a26481c7a818f0367db6 284 SUPERFAMILY SSF51735 25 280 1.66E-70 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS09330 272a21bc4de8a26481c7a818f0367db6 284 Gene3D G3DSA:3.40.50.720 22 280 6.8E-76 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS09330 272a21bc4de8a26481c7a818f0367db6 284 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 167 195 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RR42_RS09330 272a21bc4de8a26481c7a818f0367db6 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 28 45 1.4E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS09330 272a21bc4de8a26481c7a818f0367db6 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 243 263 1.4E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS09330 272a21bc4de8a26481c7a818f0367db6 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 169 1.4E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS09330 272a21bc4de8a26481c7a818f0367db6 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 199 1.4E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS09330 272a21bc4de8a26481c7a818f0367db6 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 218 1.4E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS09330 272a21bc4de8a26481c7a818f0367db6 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 106 117 1.4E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS09330 272a21bc4de8a26481c7a818f0367db6 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 180 199 4.8E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS09330 272a21bc4de8a26481c7a818f0367db6 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 106 117 4.8E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS09330 272a21bc4de8a26481c7a818f0367db6 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 167 4.8E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS15455 ff2bb41cc0a9390b34465ca12b97abae 168 ProSitePatterns PS01068 OmpA-like domain. 100 144 - T 23-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 RR42_RS15455 ff2bb41cc0a9390b34465ca12b97abae 168 PRINTS PR01021 OMPA domain signature 98 113 1.9E-15 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RR42_RS15455 ff2bb41cc0a9390b34465ca12b97abae 168 PRINTS PR01021 OMPA domain signature 68 90 1.9E-15 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RR42_RS15455 ff2bb41cc0a9390b34465ca12b97abae 168 PRINTS PR01021 OMPA domain signature 113 129 1.9E-15 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RR42_RS15455 ff2bb41cc0a9390b34465ca12b97abae 168 PANTHER PTHR30128 64 168 2.5E-44 T 23-04-2016 RR42_RS15455 ff2bb41cc0a9390b34465ca12b97abae 168 SUPERFAMILY SSF103088 63 168 7.59E-33 T 23-04-2016 IPR006665 OmpA-like domain RR42_RS15455 ff2bb41cc0a9390b34465ca12b97abae 168 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 65 168 3.9E-42 T 23-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 RR42_RS15455 ff2bb41cc0a9390b34465ca12b97abae 168 PANTHER PTHR30128:SF18 64 168 2.5E-44 T 23-04-2016 RR42_RS15455 ff2bb41cc0a9390b34465ca12b97abae 168 Pfam PF00691 OmpA family 67 162 6.5E-19 T 23-04-2016 IPR006665 OmpA-like domain RR42_RS15455 ff2bb41cc0a9390b34465ca12b97abae 168 Gene3D G3DSA:3.30.1330.60 59 167 1.7E-33 T 23-04-2016 IPR006665 OmpA-like domain RR42_RS20350 a49d4f29f841626c543da490dcd4aded 233 PANTHER PTHR31885 52 232 2.0E-25 T 23-04-2016 RR42_RS20350 a49d4f29f841626c543da490dcd4aded 233 Pfam PF07947 YhhN-like protein 50 227 1.6E-43 T 23-04-2016 IPR012506 YhhN-like GO:0016021 RR42_RS13125 8466928611070bdb4e82e88ac7bdf02c 395 PANTHER PTHR32303 29 386 1.6E-55 T 23-04-2016 RR42_RS13125 8466928611070bdb4e82e88ac7bdf02c 395 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 19 394 36.839 T 23-04-2016 IPR017687 Outer membrane protein assembly factor BamB RR42_RS13125 8466928611070bdb4e82e88ac7bdf02c 395 Pfam PF13570 PQQ-like domain 62 98 3.3E-4 T 23-04-2016 IPR025666 Pyrrolo-quinoline quinone-like domain RR42_RS13125 8466928611070bdb4e82e88ac7bdf02c 395 Gene3D G3DSA:2.140.10.10 23 392 2.3E-69 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RR42_RS13125 8466928611070bdb4e82e88ac7bdf02c 395 PANTHER PTHR32303:SF8 29 386 1.6E-55 T 23-04-2016 RR42_RS13125 8466928611070bdb4e82e88ac7bdf02c 395 Pfam PF13360 PQQ-like domain 101 321 1.6E-55 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat RR42_RS13125 8466928611070bdb4e82e88ac7bdf02c 395 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 24 392 8.3E-138 T 23-04-2016 IPR017687 Outer membrane protein assembly factor BamB RR42_RS13125 8466928611070bdb4e82e88ac7bdf02c 395 SMART SM00564 291 322 0.052 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RR42_RS13125 8466928611070bdb4e82e88ac7bdf02c 395 SMART SM00564 332 363 0.69 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RR42_RS13125 8466928611070bdb4e82e88ac7bdf02c 395 SMART SM00564 118 148 570.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RR42_RS13125 8466928611070bdb4e82e88ac7bdf02c 395 SMART SM00564 78 109 7.7E-4 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RR42_RS13125 8466928611070bdb4e82e88ac7bdf02c 395 SMART SM00564 156 188 0.052 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RR42_RS13125 8466928611070bdb4e82e88ac7bdf02c 395 SUPERFAMILY SSF50998 47 386 3.53E-78 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RR42_RS37810 6758aa7e99722826bc770f11e80e8bab 257 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 84 107 8.6E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS37810 6758aa7e99722826bc770f11e80e8bab 257 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 63 76 8.6E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS37810 6758aa7e99722826bc770f11e80e8bab 257 Gene3D G3DSA:1.10.357.10 49 233 1.6E-35 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS37810 6758aa7e99722826bc770f11e80e8bab 257 Pfam PF13305 WHG domain 137 224 1.1E-7 T 23-04-2016 IPR025996 WHG domain RR42_RS37810 6758aa7e99722826bc770f11e80e8bab 257 PANTHER PTHR30055 46 255 4.8E-21 T 23-04-2016 RR42_RS37810 6758aa7e99722826bc770f11e80e8bab 257 Pfam PF00440 Bacterial regulatory proteins, tetR family 65 109 1.4E-15 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS37810 6758aa7e99722826bc770f11e80e8bab 257 SUPERFAMILY SSF46689 53 131 1.18E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS37810 6758aa7e99722826bc770f11e80e8bab 257 SUPERFAMILY SSF48498 135 234 2.16E-10 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RR42_RS05340 5f76db61b17179923bdc78739f47e574 504 PANTHER PTHR11908:SF66 2 478 2.9E-122 T 23-04-2016 RR42_RS05340 5f76db61b17179923bdc78739f47e574 504 PANTHER PTHR11908 2 478 2.9E-122 T 23-04-2016 RR42_RS05340 5f76db61b17179923bdc78739f47e574 504 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 43 51 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RR42_RS05340 5f76db61b17179923bdc78739f47e574 504 Gene3D G3DSA:3.30.390.50 378 479 2.5E-39 T 23-04-2016 RR42_RS05340 5f76db61b17179923bdc78739f47e574 504 SMART SM01092 377 478 1.2E-37 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RR42_RS05340 5f76db61b17179923bdc78739f47e574 504 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 377 477 1.9E-33 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RR42_RS05340 5f76db61b17179923bdc78739f47e574 504 Pfam PF01799 [2Fe-2S] binding domain 86 165 5.2E-29 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RR42_RS05340 5f76db61b17179923bdc78739f47e574 504 SUPERFAMILY SSF55447 374 480 2.22E-35 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RR42_RS05340 5f76db61b17179923bdc78739f47e574 504 Gene3D G3DSA:3.30.465.10 258 370 2.8E-33 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RR42_RS05340 5f76db61b17179923bdc78739f47e574 504 PIRSF PIRSF036557 3 490 6.8E-219 T 23-04-2016 IPR012175 Xanthine dehydrogenase, small subunit, bacteria RR42_RS05340 5f76db61b17179923bdc78739f47e574 504 SUPERFAMILY SSF56176 192 370 4.58E-49 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RR42_RS05340 5f76db61b17179923bdc78739f47e574 504 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 207 370 4.3E-46 T 23-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 RR42_RS05340 5f76db61b17179923bdc78739f47e574 504 Gene3D G3DSA:3.30.43.10 208 257 7.5E-22 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RR42_RS05340 5f76db61b17179923bdc78739f47e574 504 Gene3D G3DSA:1.10.150.120 88 179 1.4E-35 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RR42_RS05340 5f76db61b17179923bdc78739f47e574 504 Gene3D G3DSA:3.10.20.30 2 87 7.4E-26 T 23-04-2016 IPR012675 Beta-grasp domain RR42_RS05340 5f76db61b17179923bdc78739f47e574 504 SUPERFAMILY SSF47741 98 215 8.11E-32 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RR42_RS05340 5f76db61b17179923bdc78739f47e574 504 SUPERFAMILY SSF54292 5 90 2.57E-16 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS05340 5f76db61b17179923bdc78739f47e574 504 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 72 2.3E-4 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS05340 5f76db61b17179923bdc78739f47e574 504 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 6 478 6.1E-214 T 23-04-2016 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 RR42_RS10615 399e743a5ddcfc7df6bace38494da0ab 341 SUPERFAMILY SSF51735 109 287 7.0E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10615 399e743a5ddcfc7df6bace38494da0ab 341 PANTHER PTHR10996 21 319 8.7E-77 T 23-04-2016 RR42_RS10615 399e743a5ddcfc7df6bace38494da0ab 341 Gene3D G3DSA:3.40.50.720 19 120 9.6E-17 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10615 399e743a5ddcfc7df6bace38494da0ab 341 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 151 178 - T 23-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RR42_RS10615 399e743a5ddcfc7df6bace38494da0ab 341 Gene3D G3DSA:3.40.50.720 121 289 1.6E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10615 399e743a5ddcfc7df6bace38494da0ab 341 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RR42_RS10615 399e743a5ddcfc7df6bace38494da0ab 341 SUPERFAMILY SSF52283 20 129 2.98E-16 T 23-04-2016 RR42_RS10615 399e743a5ddcfc7df6bace38494da0ab 341 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 116 286 3.6E-48 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RR42_RS10615 399e743a5ddcfc7df6bace38494da0ab 341 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 20 318 2.4E-15 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RR42_RS11390 c9c07a239f09b030f9dea6f052e4fae3 215 TIGRFAM TIGR04508 queE_Cx14CxxC: 7-carboxy-7-deazaguanine synthase 3 215 7.8E-107 T 23-04-2016 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type GO:0008616|GO:0046872 KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 RR42_RS11390 c9c07a239f09b030f9dea6f052e4fae3 215 PANTHER PTHR11228:SF6 1 159 2.6E-25 T 23-04-2016 RR42_RS11390 c9c07a239f09b030f9dea6f052e4fae3 215 PANTHER PTHR11228 1 159 2.6E-25 T 23-04-2016 RR42_RS11390 c9c07a239f09b030f9dea6f052e4fae3 215 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 215 34.056 T 23-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 RR42_RS11390 c9c07a239f09b030f9dea6f052e4fae3 215 PIRSF PIRSF000370 1 215 2.5E-37 T 23-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 RR42_RS11390 c9c07a239f09b030f9dea6f052e4fae3 215 SUPERFAMILY SSF102114 46 138 2.16E-7 T 23-04-2016 RR42_RS11390 c9c07a239f09b030f9dea6f052e4fae3 215 Pfam PF13394 4Fe-4S single cluster domain 25 126 6.7E-6 T 23-04-2016 RR42_RS11390 c9c07a239f09b030f9dea6f052e4fae3 215 Gene3D G3DSA:3.80.30.10 92 133 3.4E-8 T 23-04-2016 RR42_RS19715 eaa1038a4ad3ab38d802f9451f21761c 420 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 29 148 1.4E-14 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS19715 eaa1038a4ad3ab38d802f9451f21761c 420 SUPERFAMILY SSF55424 352 420 4.39E-20 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RR42_RS19715 eaa1038a4ad3ab38d802f9451f21761c 420 Gene3D G3DSA:3.50.50.60 277 348 3.6E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS19715 eaa1038a4ad3ab38d802f9451f21761c 420 Gene3D G3DSA:3.50.50.60 27 143 3.6E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS19715 eaa1038a4ad3ab38d802f9451f21761c 420 PANTHER PTHR10632 30 374 8.8E-105 T 23-04-2016 RR42_RS19715 eaa1038a4ad3ab38d802f9451f21761c 420 PANTHER PTHR10632:SF10 30 374 8.8E-105 T 23-04-2016 RR42_RS19715 eaa1038a4ad3ab38d802f9451f21761c 420 SUPERFAMILY SSF51905 29 135 2.0E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS19715 eaa1038a4ad3ab38d802f9451f21761c 420 SUPERFAMILY SSF51905 271 347 2.0E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS19715 eaa1038a4ad3ab38d802f9451f21761c 420 SUPERFAMILY SSF51905 142 276 4.66E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS19715 eaa1038a4ad3ab38d802f9451f21761c 420 Pfam PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding 353 419 2.2E-23 T 23-04-2016 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 RR42_RS19715 eaa1038a4ad3ab38d802f9451f21761c 420 Gene3D G3DSA:3.90.760.10 353 420 6.6E-26 T 23-04-2016 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 RR42_RS19715 eaa1038a4ad3ab38d802f9451f21761c 420 Gene3D G3DSA:3.50.50.60 150 276 3.8E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS15975 7aecf88503250643cc3e9f4d265878f9 221 Gene3D G3DSA:3.30.70.20 3 63 7.5E-21 T 23-04-2016 RR42_RS15975 7aecf88503250643cc3e9f4d265878f9 221 Gene3D G3DSA:3.30.70.20 120 176 7.5E-21 T 23-04-2016 RR42_RS15975 7aecf88503250643cc3e9f4d265878f9 221 Gene3D G3DSA:3.30.70.20 64 119 5.7E-22 T 23-04-2016 RR42_RS15975 7aecf88503250643cc3e9f4d265878f9 221 PANTHER PTHR11938 1 124 1.6E-90 T 23-04-2016 RR42_RS15975 7aecf88503250643cc3e9f4d265878f9 221 PANTHER PTHR11938 142 178 1.6E-90 T 23-04-2016 RR42_RS15975 7aecf88503250643cc3e9f4d265878f9 221 PANTHER PTHR11938:SF96 1 124 1.6E-90 T 23-04-2016 RR42_RS15975 7aecf88503250643cc3e9f4d265878f9 221 PANTHER PTHR11938:SF96 142 178 1.6E-90 T 23-04-2016 RR42_RS15975 7aecf88503250643cc3e9f4d265878f9 221 SUPERFAMILY SSF54862 1 181 2.62E-49 T 23-04-2016 RR42_RS15975 7aecf88503250643cc3e9f4d265878f9 221 PRINTS PR00354 7Fe ferredoxin signature 83 100 1.2E-5 T 23-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RR42_RS15975 7aecf88503250643cc3e9f4d265878f9 221 PRINTS PR00354 7Fe ferredoxin signature 66 76 1.2E-5 T 23-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RR42_RS15975 7aecf88503250643cc3e9f4d265878f9 221 PRINTS PR00354 7Fe ferredoxin signature 56 66 1.2E-5 T 23-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RR42_RS15975 7aecf88503250643cc3e9f4d265878f9 221 Pfam PF13247 4Fe-4S dicluster domain 53 164 1.6E-11 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RR42_RS15975 7aecf88503250643cc3e9f4d265878f9 221 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 88 99 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RR42_RS02555 609fc863d1805269eb6a929e58b313a7 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 23-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RR42_RS02555 609fc863d1805269eb6a929e58b313a7 152 Gene3D G3DSA:1.10.10.10 2 53 4.5E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS02555 609fc863d1805269eb6a929e58b313a7 152 SUPERFAMILY SSF46785 1 59 1.25E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS02555 609fc863d1805269eb6a929e58b313a7 152 PANTHER PTHR30154:SF17 1 150 4.2E-74 T 23-04-2016 RR42_RS02555 609fc863d1805269eb6a929e58b313a7 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.5E-14 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS02555 609fc863d1805269eb6a929e58b313a7 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.5E-14 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS02555 609fc863d1805269eb6a929e58b313a7 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.5E-14 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS02555 609fc863d1805269eb6a929e58b313a7 152 PANTHER PTHR30154 1 150 4.2E-74 T 23-04-2016 RR42_RS02555 609fc863d1805269eb6a929e58b313a7 152 Gene3D G3DSA:3.30.70.920 54 137 3.1E-29 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RR42_RS02555 609fc863d1805269eb6a929e58b313a7 152 SUPERFAMILY SSF54909 62 149 6.44E-21 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RR42_RS02555 609fc863d1805269eb6a929e58b313a7 152 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 3.8E-19 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RR42_RS02555 609fc863d1805269eb6a929e58b313a7 152 SMART SM00344 1 110 1.4E-41 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RR42_RS02555 609fc863d1805269eb6a929e58b313a7 152 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 1.0E-18 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS09830 ba71f6949a1935f5cfe0f3ac0dd0e17a 93 Pfam PF00816 H-NS histone family 26 88 5.5E-8 T 23-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 RR42_RS05620 8d7f4b09a3f7228125201a9740c24201 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 5.4E-12 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS05620 8d7f4b09a3f7228125201a9740c24201 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 5.4E-12 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS05620 8d7f4b09a3f7228125201a9740c24201 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 48 63 5.4E-12 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS05620 8d7f4b09a3f7228125201a9740c24201 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 207 221 5.4E-12 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS05620 8d7f4b09a3f7228125201a9740c24201 278 Gene3D G3DSA:3.40.50.1820 11 261 2.1E-48 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS05620 8d7f4b09a3f7228125201a9740c24201 278 SUPERFAMILY SSF53474 9 261 1.32E-50 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS05620 8d7f4b09a3f7228125201a9740c24201 278 Pfam PF00561 alpha/beta hydrolase fold 25 248 1.3E-20 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS05620 8d7f4b09a3f7228125201a9740c24201 278 PANTHER PTHR10992 16 262 2.5E-43 T 23-04-2016 RR42_RS15350 76ff40c24cb7951903cb2e13a06639ea 414 SUPERFAMILY SSF56645 13 248 4.97E-43 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RR42_RS15350 76ff40c24cb7951903cb2e13a06639ea 414 Gene3D G3DSA:1.20.140.10 242 406 1.7E-23 T 23-04-2016 RR42_RS15350 76ff40c24cb7951903cb2e13a06639ea 414 Gene3D G3DSA:1.10.540.10 13 105 2.8E-23 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS15350 76ff40c24cb7951903cb2e13a06639ea 414 Gene3D G3DSA:2.40.110.10 155 241 1.7E-20 T 23-04-2016 RR42_RS15350 76ff40c24cb7951903cb2e13a06639ea 414 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 160 241 8.6E-11 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RR42_RS15350 76ff40c24cb7951903cb2e13a06639ea 414 SUPERFAMILY SSF47203 260 391 3.54E-19 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS15350 76ff40c24cb7951903cb2e13a06639ea 414 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 272 387 3.0E-12 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS15350 76ff40c24cb7951903cb2e13a06639ea 414 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 104 5.3E-16 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS15350 76ff40c24cb7951903cb2e13a06639ea 414 PANTHER PTHR10909:SF338 136 414 6.2E-147 T 23-04-2016 RR42_RS15350 76ff40c24cb7951903cb2e13a06639ea 414 PANTHER PTHR10909:SF338 13 114 6.2E-147 T 23-04-2016 RR42_RS15350 76ff40c24cb7951903cb2e13a06639ea 414 PANTHER PTHR10909 136 414 6.2E-147 T 23-04-2016 RR42_RS15350 76ff40c24cb7951903cb2e13a06639ea 414 PANTHER PTHR10909 13 114 6.2E-147 T 23-04-2016 RR42_RS03945 d2aeb59030ddd4f38f14632ec2f37cac 579 PANTHER PTHR11689 23 572 1.9E-53 T 23-04-2016 RR42_RS03945 d2aeb59030ddd4f38f14632ec2f37cac 579 Pfam PF00654 Voltage gated chloride channel 73 405 1.9E-68 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RR42_RS03945 d2aeb59030ddd4f38f14632ec2f37cac 579 SMART SM00116 511 561 0.0039 T 23-04-2016 IPR000644 CBS domain RR42_RS03945 d2aeb59030ddd4f38f14632ec2f37cac 579 SMART SM00116 448 497 110.0 T 23-04-2016 IPR000644 CBS domain RR42_RS03945 d2aeb59030ddd4f38f14632ec2f37cac 579 Gene3D G3DSA:3.20.20.70 439 578 2.1E-9 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS03945 d2aeb59030ddd4f38f14632ec2f37cac 579 SUPERFAMILY SSF81340 8 430 4.71E-91 T 23-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 RR42_RS03945 d2aeb59030ddd4f38f14632ec2f37cac 579 PANTHER PTHR11689:SF14 23 572 1.9E-53 T 23-04-2016 RR42_RS03945 d2aeb59030ddd4f38f14632ec2f37cac 579 Pfam PF00571 CBS domain 515 558 6.3E-7 T 23-04-2016 IPR000644 CBS domain RR42_RS03945 d2aeb59030ddd4f38f14632ec2f37cac 579 Gene3D G3DSA:1.10.3080.10 11 427 5.3E-64 T 23-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 RR42_RS03945 d2aeb59030ddd4f38f14632ec2f37cac 579 SUPERFAMILY SSF54631 432 558 9.7E-12 T 23-04-2016 RR42_RS03945 d2aeb59030ddd4f38f14632ec2f37cac 579 PRINTS PR00762 Chloride channel signature 376 395 2.5E-11 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RR42_RS03945 d2aeb59030ddd4f38f14632ec2f37cac 579 PRINTS PR00762 Chloride channel signature 358 374 2.5E-11 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RR42_RS03945 d2aeb59030ddd4f38f14632ec2f37cac 579 PRINTS PR00762 Chloride channel signature 116 135 2.5E-11 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RR42_RS03945 d2aeb59030ddd4f38f14632ec2f37cac 579 PRINTS PR00762 Chloride channel signature 167 186 2.5E-11 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RR42_RS14525 72467a6864dd6dd38a0df36ea24d8d45 378 Gene3D G3DSA:3.40.50.1100 145 338 1.6E-33 T 23-04-2016 RR42_RS14525 72467a6864dd6dd38a0df36ea24d8d45 378 PANTHER PTHR10314 1 373 4.7E-177 T 23-04-2016 RR42_RS14525 72467a6864dd6dd38a0df36ea24d8d45 378 PANTHER PTHR10314:SF126 1 373 4.7E-177 T 23-04-2016 RR42_RS14525 72467a6864dd6dd38a0df36ea24d8d45 378 Gene3D G3DSA:3.40.50.1100 47 144 3.9E-22 T 23-04-2016 RR42_RS14525 72467a6864dd6dd38a0df36ea24d8d45 378 SUPERFAMILY SSF53686 6 337 1.31E-63 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RR42_RS14525 72467a6864dd6dd38a0df36ea24d8d45 378 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 36 320 2.3E-40 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RR42_RS17060 a0bb1a26205ecc2be9b0360fcb991904 596 SMART SM00388 230 295 3.7E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS17060 a0bb1a26205ecc2be9b0360fcb991904 596 PANTHER PTHR24423 209 594 3.6E-85 T 23-04-2016 RR42_RS17060 a0bb1a26205ecc2be9b0360fcb991904 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 404 2.4E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS17060 a0bb1a26205ecc2be9b0360fcb991904 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 429 2.4E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS17060 a0bb1a26205ecc2be9b0360fcb991904 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 2.4E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS17060 a0bb1a26205ecc2be9b0360fcb991904 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 448 2.4E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS17060 a0bb1a26205ecc2be9b0360fcb991904 596 Gene3D G3DSA:3.30.565.10 300 448 1.4E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS17060 a0bb1a26205ecc2be9b0360fcb991904 596 SUPERFAMILY SSF47384 213 295 2.35E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS17060 a0bb1a26205ecc2be9b0360fcb991904 596 Gene3D G3DSA:1.10.287.130 222 291 1.0E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS17060 a0bb1a26205ecc2be9b0360fcb991904 596 SMART SM00448 477 589 2.3E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS17060 a0bb1a26205ecc2be9b0360fcb991904 596 Gene3D G3DSA:3.40.50.2300 477 594 1.5E-21 T 23-04-2016 RR42_RS17060 a0bb1a26205ecc2be9b0360fcb991904 596 Pfam PF00072 Response regulator receiver domain 479 587 6.8E-14 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS17060 a0bb1a26205ecc2be9b0360fcb991904 596 SMART SM00387 340 451 2.2E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS17060 a0bb1a26205ecc2be9b0360fcb991904 596 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 294 6.6E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS17060 a0bb1a26205ecc2be9b0360fcb991904 596 PANTHER PTHR24423:SF439 209 594 3.6E-85 T 23-04-2016 RR42_RS17060 a0bb1a26205ecc2be9b0360fcb991904 596 SUPERFAMILY SSF52172 478 594 1.99E-23 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS17060 a0bb1a26205ecc2be9b0360fcb991904 596 SUPERFAMILY SSF55874 285 447 1.14E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS17060 a0bb1a26205ecc2be9b0360fcb991904 596 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 447 1.9E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS06055 7bc6e4ad341072b4e008e8a31fa3fe14 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 3.1E-60 T 23-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 RR42_RS06055 7bc6e4ad341072b4e008e8a31fa3fe14 112 Gene3D G3DSA:3.10.20.30 4 109 1.3E-33 T 23-04-2016 IPR012675 Beta-grasp domain RR42_RS06055 7bc6e4ad341072b4e008e8a31fa3fe14 112 PRINTS PR00355 Adrenodoxin signature 60 74 4.7E-10 T 23-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 RR42_RS06055 7bc6e4ad341072b4e008e8a31fa3fe14 112 PRINTS PR00355 Adrenodoxin signature 83 91 4.7E-10 T 23-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 RR42_RS06055 7bc6e4ad341072b4e008e8a31fa3fe14 112 PRINTS PR00355 Adrenodoxin signature 42 52 4.7E-10 T 23-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 RR42_RS06055 7bc6e4ad341072b4e008e8a31fa3fe14 112 PANTHER PTHR23426 7 112 3.0E-39 T 23-04-2016 RR42_RS06055 7bc6e4ad341072b4e008e8a31fa3fe14 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 23-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 RR42_RS06055 7bc6e4ad341072b4e008e8a31fa3fe14 112 SUPERFAMILY SSF54292 4 108 8.18E-33 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS06055 7bc6e4ad341072b4e008e8a31fa3fe14 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 91 1.4E-13 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS10095 e173c8d2cbb3b0ba2226c03e1e8c7f25 254 SUPERFAMILY SSF161098 58 239 4.45E-29 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS10095 e173c8d2cbb3b0ba2226c03e1e8c7f25 254 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 245 6.9E-10 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS10095 e173c8d2cbb3b0ba2226c03e1e8c7f25 254 PANTHER PTHR30043 1 254 2.1E-78 T 23-04-2016 RR42_RS10095 e173c8d2cbb3b0ba2226c03e1e8c7f25 254 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 4 248 5.4E-71 T 23-04-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 RR42_RS10095 e173c8d2cbb3b0ba2226c03e1e8c7f25 254 Gene3D G3DSA:1.10.3720.10 56 250 7.2E-23 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS10095 e173c8d2cbb3b0ba2226c03e1e8c7f25 254 PANTHER PTHR30043:SF1 1 254 2.1E-78 T 23-04-2016 RR42_RS13600 6b8d08bedaf33b176229d7377c3f6b81 197 Gene3D G3DSA:1.10.8.10 130 187 8.5E-15 T 23-04-2016 RR42_RS13600 6b8d08bedaf33b176229d7377c3f6b81 197 PIRSF PIRSF029669 2 197 5.9E-78 T 23-04-2016 IPR016932 Uncharacterised conserved protein UCP029669 RR42_RS13600 6b8d08bedaf33b176229d7377c3f6b81 197 Gene3D G3DSA:3.90.1530.10 7 129 4.1E-42 T 23-04-2016 RR42_RS13600 6b8d08bedaf33b176229d7377c3f6b81 197 SUPERFAMILY SSF110849 9 195 1.41E-63 T 23-04-2016 IPR003115 ParB/Sulfiredoxin RR42_RS13600 6b8d08bedaf33b176229d7377c3f6b81 197 Pfam PF08857 Putative ParB-like nuclease 9 162 4.5E-53 T 23-04-2016 IPR014956 Putative ParB-like nuclease RR42_RS16830 d8118cc16929b6ea8514cdc877b56a5c 391 SUPERFAMILY SSF53822 28 387 5.23E-72 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RR42_RS16830 d8118cc16929b6ea8514cdc877b56a5c 391 Pfam PF13458 Periplasmic binding protein 29 379 2.4E-52 T 23-04-2016 IPR028081 Leucine-binding protein domain RR42_RS16830 d8118cc16929b6ea8514cdc877b56a5c 391 Gene3D G3DSA:3.40.50.2300 28 223 2.0E-42 T 23-04-2016 RR42_RS16830 d8118cc16929b6ea8514cdc877b56a5c 391 PANTHER PTHR30483 13 388 1.0E-123 T 23-04-2016 RR42_RS16830 d8118cc16929b6ea8514cdc877b56a5c 391 PANTHER PTHR30483:SF7 13 388 1.0E-123 T 23-04-2016 RR42_RS01810 75dfbd275b0d54cd8a05220c9f8f3c4a 374 SMART SM00450 2 133 7.6E-8 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS01810 75dfbd275b0d54cd8a05220c9f8f3c4a 374 PANTHER PTHR30401 2 373 8.9E-164 T 23-04-2016 RR42_RS01810 75dfbd275b0d54cd8a05220c9f8f3c4a 374 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 1 371 53.592 T 23-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 RR42_RS01810 75dfbd275b0d54cd8a05220c9f8f3c4a 374 Gene3D G3DSA:3.40.250.10 7 130 1.5E-26 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS01810 75dfbd275b0d54cd8a05220c9f8f3c4a 374 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 16 355 1.4E-104 T 23-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 RR42_RS01810 75dfbd275b0d54cd8a05220c9f8f3c4a 374 PANTHER PTHR30401:SF0 2 373 8.9E-164 T 23-04-2016 RR42_RS01810 75dfbd275b0d54cd8a05220c9f8f3c4a 374 SUPERFAMILY SSF52821 4 64 2.23E-20 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS01810 75dfbd275b0d54cd8a05220c9f8f3c4a 374 SUPERFAMILY SSF52821 92 155 2.23E-20 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS11140 8a43ac1f2fab95b49076c316659cca79 437 PANTHER PTHR30482 1 361 8.9E-58 T 23-04-2016 RR42_RS11140 8a43ac1f2fab95b49076c316659cca79 437 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 322 3.8E-29 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RR42_RS00050 2036a0642a3b14b66b59b5b403d1953a 706 Gene3D G3DSA:3.40.50.300 318 413 6.1E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS00050 2036a0642a3b14b66b59b5b403d1953a 706 SUPERFAMILY SSF52540 45 211 1.02E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS00050 2036a0642a3b14b66b59b5b403d1953a 706 SUPERFAMILY SSF52540 318 399 1.02E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS00050 2036a0642a3b14b66b59b5b403d1953a 706 SUPERFAMILY SSF52540 239 289 1.02E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS00050 2036a0642a3b14b66b59b5b403d1953a 706 Gene3D G3DSA:3.40.50.300 34 212 7.2E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS19490 45fbdd59dbe8589cbe51768fbe33bb20 142 SUPERFAMILY SSF54523 54 135 3.88E-19 T 23-04-2016 RR42_RS19490 45fbdd59dbe8589cbe51768fbe33bb20 142 PANTHER PTHR38779:SF1 15 138 1.7E-23 T 23-04-2016 RR42_RS19490 45fbdd59dbe8589cbe51768fbe33bb20 142 PANTHER PTHR38779 15 138 1.7E-23 T 23-04-2016 RR42_RS19490 45fbdd59dbe8589cbe51768fbe33bb20 142 Pfam PF02501 Type II secretion system (T2SS), protein I 55 134 3.9E-24 T 23-04-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 RR42_RS19490 45fbdd59dbe8589cbe51768fbe33bb20 142 Pfam PF13633 Prokaryotic N-terminal methylation site 20 44 8.8E-11 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS19490 45fbdd59dbe8589cbe51768fbe33bb20 142 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 20 40 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS19490 45fbdd59dbe8589cbe51768fbe33bb20 142 Gene3D G3DSA:3.30.1300.30 53 125 3.9E-12 T 23-04-2016 RR42_RS19490 45fbdd59dbe8589cbe51768fbe33bb20 142 TIGRFAM TIGR01707 gspI: type II secretion system protein I 21 117 7.5E-22 T 23-04-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 RR42_RS19490 45fbdd59dbe8589cbe51768fbe33bb20 142 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 20 42 2.2E-8 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS17225 ff43e9714999acdad07d6939e173674f 235 SUPERFAMILY SSF52540 15 211 7.1E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17225 ff43e9714999acdad07d6939e173674f 235 PANTHER PTHR30050:SF5 4 229 1.4E-46 T 23-04-2016 RR42_RS17225 ff43e9714999acdad07d6939e173674f 235 PANTHER PTHR30050 4 229 1.4E-46 T 23-04-2016 RR42_RS17225 ff43e9714999acdad07d6939e173674f 235 Gene3D G3DSA:1.10.8.60 166 230 1.3E-25 T 23-04-2016 RR42_RS17225 ff43e9714999acdad07d6939e173674f 235 Pfam PF00308 Bacterial dnaA protein 100 210 1.7E-6 T 23-04-2016 IPR013317 Chromosomal replication initiator protein DnaA RR42_RS17225 ff43e9714999acdad07d6939e173674f 235 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 7 230 5.9E-74 T 23-04-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 RR42_RS17225 ff43e9714999acdad07d6939e173674f 235 Gene3D G3DSA:3.40.50.300 3 163 5.5E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS09235 347eacd55b6f9cd1f904113b88fc120f 498 Gene3D G3DSA:2.20.200.10 327 362 7.5E-23 T 23-04-2016 RR42_RS09235 347eacd55b6f9cd1f904113b88fc120f 498 Gene3D G3DSA:2.20.200.10 111 153 7.5E-23 T 23-04-2016 RR42_RS09235 347eacd55b6f9cd1f904113b88fc120f 498 PANTHER PTHR30203 1 491 1.1E-115 T 23-04-2016 RR42_RS09235 347eacd55b6f9cd1f904113b88fc120f 498 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 22 477 2.4E-111 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RR42_RS09235 347eacd55b6f9cd1f904113b88fc120f 498 PANTHER PTHR30203:SF6 1 491 1.1E-115 T 23-04-2016 RR42_RS09235 347eacd55b6f9cd1f904113b88fc120f 498 Pfam PF02321 Outer membrane efflux protein 77 266 1.8E-18 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RR42_RS09235 347eacd55b6f9cd1f904113b88fc120f 498 Pfam PF02321 Outer membrane efflux protein 290 472 3.6E-21 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RR42_RS09235 347eacd55b6f9cd1f904113b88fc120f 498 SUPERFAMILY SSF56954 16 479 1.44E-86 T 23-04-2016 RR42_RS09235 347eacd55b6f9cd1f904113b88fc120f 498 Gene3D G3DSA:1.20.1600.10 154 326 3.9E-78 T 23-04-2016 RR42_RS09235 347eacd55b6f9cd1f904113b88fc120f 498 Gene3D G3DSA:1.20.1600.10 364 477 3.9E-78 T 23-04-2016 RR42_RS09235 347eacd55b6f9cd1f904113b88fc120f 498 Gene3D G3DSA:1.20.1600.10 61 101 3.9E-78 T 23-04-2016 RR42_RS18985 513f211e0dedb3ffedd84f03e8f037d2 487 PANTHER PTHR11938 233 329 6.2E-144 T 23-04-2016 RR42_RS18985 513f211e0dedb3ffedd84f03e8f037d2 487 PANTHER PTHR11938 345 480 6.2E-144 T 23-04-2016 RR42_RS18985 513f211e0dedb3ffedd84f03e8f037d2 487 PANTHER PTHR11938 36 217 6.2E-144 T 23-04-2016 RR42_RS18985 513f211e0dedb3ffedd84f03e8f037d2 487 Gene3D G3DSA:3.50.50.60 256 401 5.3E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS18985 513f211e0dedb3ffedd84f03e8f037d2 487 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 486 7.0E-220 T 23-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 RR42_RS18985 513f211e0dedb3ffedd84f03e8f037d2 487 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 145 468 2.9E-26 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS18985 513f211e0dedb3ffedd84f03e8f037d2 487 SUPERFAMILY SSF51905 378 475 1.49E-12 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS18985 513f211e0dedb3ffedd84f03e8f037d2 487 PANTHER PTHR11938:SF75 233 329 6.2E-144 T 23-04-2016 RR42_RS18985 513f211e0dedb3ffedd84f03e8f037d2 487 PANTHER PTHR11938:SF75 345 480 6.2E-144 T 23-04-2016 RR42_RS18985 513f211e0dedb3ffedd84f03e8f037d2 487 PANTHER PTHR11938:SF75 36 217 6.2E-144 T 23-04-2016 RR42_RS18985 513f211e0dedb3ffedd84f03e8f037d2 487 Gene3D G3DSA:3.50.50.60 402 479 4.2E-15 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS18985 513f211e0dedb3ffedd84f03e8f037d2 487 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 131 4.5E-25 T 23-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II RR42_RS18985 513f211e0dedb3ffedd84f03e8f037d2 487 Gene3D G3DSA:1.10.1060.10 4 144 9.3E-41 T 23-04-2016 RR42_RS18985 513f211e0dedb3ffedd84f03e8f037d2 487 PRINTS PR00419 Adrenodoxin reductase family signature 296 310 4.9E-20 T 23-04-2016 RR42_RS18985 513f211e0dedb3ffedd84f03e8f037d2 487 PRINTS PR00419 Adrenodoxin reductase family signature 168 181 4.9E-20 T 23-04-2016 RR42_RS18985 513f211e0dedb3ffedd84f03e8f037d2 487 PRINTS PR00419 Adrenodoxin reductase family signature 145 167 4.9E-20 T 23-04-2016 RR42_RS18985 513f211e0dedb3ffedd84f03e8f037d2 487 SUPERFAMILY SSF46548 2 154 3.66E-40 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RR42_RS18985 513f211e0dedb3ffedd84f03e8f037d2 487 Gene3D G3DSA:3.50.50.60 145 255 5.5E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS18985 513f211e0dedb3ffedd84f03e8f037d2 487 SUPERFAMILY SSF51971 142 410 4.71E-63 T 23-04-2016 RR42_RS01460 35e21ae22a34a85252119ae37d87d9bd 612 SUPERFAMILY SSF53697 250 612 5.1E-106 T 23-04-2016 RR42_RS01460 35e21ae22a34a85252119ae37d87d9bd 612 Gene3D G3DSA:3.40.50.10490 446 612 1.1E-61 T 23-04-2016 RR42_RS01460 35e21ae22a34a85252119ae37d87d9bd 612 SUPERFAMILY SSF56235 2 241 1.2E-67 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RR42_RS01460 35e21ae22a34a85252119ae37d87d9bd 612 PANTHER PTHR10937 1 612 2.0E-294 T 23-04-2016 RR42_RS01460 35e21ae22a34a85252119ae37d87d9bd 612 Gene3D G3DSA:3.60.20.10 2 239 3.6E-73 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RR42_RS01460 35e21ae22a34a85252119ae37d87d9bd 612 Gene3D G3DSA:3.40.50.10490 249 445 1.1E-67 T 23-04-2016 RR42_RS01460 35e21ae22a34a85252119ae37d87d9bd 612 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 612 4.6E-245 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 RR42_RS01460 35e21ae22a34a85252119ae37d87d9bd 612 Pfam PF13522 Glutamine amidotransferase domain 65 197 3.1E-21 T 23-04-2016 RR42_RS01460 35e21ae22a34a85252119ae37d87d9bd 612 Pfam PF01380 SIS domain 295 420 6.7E-25 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RR42_RS01460 35e21ae22a34a85252119ae37d87d9bd 612 Pfam PF01380 SIS domain 466 593 1.4E-23 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RR42_RS01460 35e21ae22a34a85252119ae37d87d9bd 612 PANTHER PTHR10937:SF0 1 612 2.0E-294 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 RR42_RS01460 35e21ae22a34a85252119ae37d87d9bd 612 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 612 38.568 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 RR42_RS31685 d3c2b398ac701029bbc7573ecb82f58e 206 PANTHER PTHR32027 17 200 6.1E-37 T 23-04-2016 RR42_RS31685 d3c2b398ac701029bbc7573ecb82f58e 206 SUPERFAMILY SSF88713 36 205 5.19E-29 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RR42_RS31685 d3c2b398ac701029bbc7573ecb82f58e 206 PANTHER PTHR32027:SF8 17 200 6.1E-37 T 23-04-2016 RR42_RS31685 d3c2b398ac701029bbc7573ecb82f58e 206 Pfam PF01522 Polysaccharide deacetylase 76 204 6.2E-20 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RR42_RS31685 d3c2b398ac701029bbc7573ecb82f58e 206 Gene3D G3DSA:3.20.20.370 76 205 2.0E-17 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RR42_RS09115 eb56fbb2ebba36b63daa0531e35a0c46 624 Gene3D G3DSA:3.50.50.60 547 617 6.2E-90 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS09115 eb56fbb2ebba36b63daa0531e35a0c46 624 Gene3D G3DSA:3.50.50.60 472 486 6.2E-90 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS09115 eb56fbb2ebba36b63daa0531e35a0c46 624 Gene3D G3DSA:3.50.50.60 5 152 6.2E-90 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS09115 eb56fbb2ebba36b63daa0531e35a0c46 624 Gene3D G3DSA:3.50.50.60 246 372 6.2E-90 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS09115 eb56fbb2ebba36b63daa0531e35a0c46 624 PANTHER PTHR11552:SF100 230 610 8.1E-161 T 23-04-2016 RR42_RS09115 eb56fbb2ebba36b63daa0531e35a0c46 624 PANTHER PTHR11552:SF100 2 208 8.1E-161 T 23-04-2016 RR42_RS09115 eb56fbb2ebba36b63daa0531e35a0c46 624 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 324 338 - T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 RR42_RS09115 eb56fbb2ebba36b63daa0531e35a0c46 624 PANTHER PTHR11552 230 610 8.1E-161 T 23-04-2016 RR42_RS09115 eb56fbb2ebba36b63daa0531e35a0c46 624 PANTHER PTHR11552 2 208 8.1E-161 T 23-04-2016 RR42_RS09115 eb56fbb2ebba36b63daa0531e35a0c46 624 SUPERFAMILY SSF51905 548 610 1.62E-60 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS09115 eb56fbb2ebba36b63daa0531e35a0c46 624 SUPERFAMILY SSF51905 8 353 1.62E-60 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS09115 eb56fbb2ebba36b63daa0531e35a0c46 624 Pfam PF00732 GMC oxidoreductase 10 365 1.1E-35 T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 RR42_RS09115 eb56fbb2ebba36b63daa0531e35a0c46 624 SUPERFAMILY SSF54373 403 552 1.23E-21 T 23-04-2016 RR42_RS09115 eb56fbb2ebba36b63daa0531e35a0c46 624 PIRSF PIRSF000137 1 618 1.2E-125 T 23-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 RR42_RS09115 eb56fbb2ebba36b63daa0531e35a0c46 624 Pfam PF05199 GMC oxidoreductase 464 603 3.5E-27 T 23-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 RR42_RS09170 4c3fc4554394531afc3cc51452606846 474 PANTHER PTHR24423:SF354 71 92 2.2E-96 T 23-04-2016 RR42_RS09170 4c3fc4554394531afc3cc51452606846 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 409 2.2E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS09170 4c3fc4554394531afc3cc51452606846 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 423 2.2E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS09170 4c3fc4554394531afc3cc51452606846 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 448 2.2E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS09170 4c3fc4554394531afc3cc51452606846 474 PANTHER PTHR24423 71 92 2.2E-96 T 23-04-2016 RR42_RS09170 4c3fc4554394531afc3cc51452606846 474 SMART SM00304 195 248 3.0E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS09170 4c3fc4554394531afc3cc51452606846 474 Gene3D G3DSA:1.10.287.130 239 310 1.1E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS09170 4c3fc4554394531afc3cc51452606846 474 PANTHER PTHR24423:SF354 189 470 2.2E-96 T 23-04-2016 RR42_RS09170 4c3fc4554394531afc3cc51452606846 474 SUPERFAMILY SSF47384 232 314 4.12E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS09170 4c3fc4554394531afc3cc51452606846 474 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 7 467 3.3E-128 T 23-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 RR42_RS09170 4c3fc4554394531afc3cc51452606846 474 PANTHER PTHR24423 189 470 2.2E-96 T 23-04-2016 RR42_RS09170 4c3fc4554394531afc3cc51452606846 474 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 458 4.7E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS09170 4c3fc4554394531afc3cc51452606846 474 SMART SM00388 249 315 2.2E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS09170 4c3fc4554394531afc3cc51452606846 474 SMART SM00387 358 470 2.7E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS09170 4c3fc4554394531afc3cc51452606846 474 SUPERFAMILY SSF55874 320 468 1.02E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS09170 4c3fc4554394531afc3cc51452606846 474 Pfam PF00672 HAMP domain 176 244 4.1E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS09170 4c3fc4554394531afc3cc51452606846 474 Gene3D G3DSA:3.30.565.10 319 470 1.8E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS09170 4c3fc4554394531afc3cc51452606846 474 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 314 9.2E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS05970 1d2fcf0cf541d19fb61ce79b81d53e2a 214 PIRSF PIRSF001435 2 212 2.1E-49 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 RR42_RS05970 1d2fcf0cf541d19fb61ce79b81d53e2a 214 Gene3D G3DSA:1.10.340.30 22 122 2.3E-33 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RR42_RS05970 1d2fcf0cf541d19fb61ce79b81d53e2a 214 SMART SM00478 38 185 1.2E-51 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RR42_RS05970 1d2fcf0cf541d19fb61ce79b81d53e2a 214 Hamap MF_00942 Endonuclease III [nth]. 1 209 36.597 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 RR42_RS05970 1d2fcf0cf541d19fb61ce79b81d53e2a 214 SUPERFAMILY SSF48150 5 208 8.48E-71 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RR42_RS05970 1d2fcf0cf541d19fb61ce79b81d53e2a 214 Gene3D G3DSA:1.10.1670.10 123 208 9.2E-36 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RR42_RS05970 1d2fcf0cf541d19fb61ce79b81d53e2a 214 PANTHER PTHR10359:SF18 8 210 2.3E-88 T 23-04-2016 RR42_RS05970 1d2fcf0cf541d19fb61ce79b81d53e2a 214 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 23-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 RR42_RS05970 1d2fcf0cf541d19fb61ce79b81d53e2a 214 PANTHER PTHR10359 8 210 2.3E-88 T 23-04-2016 RR42_RS05970 1d2fcf0cf541d19fb61ce79b81d53e2a 214 TIGRFAM TIGR01083 nth: endonuclease III 5 194 1.1E-83 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 RR42_RS05970 1d2fcf0cf541d19fb61ce79b81d53e2a 214 Pfam PF00633 Helix-hairpin-helix motif 100 127 8.7E-8 T 23-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 RR42_RS05970 1d2fcf0cf541d19fb61ce79b81d53e2a 214 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 169 1.3E-18 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RR42_RS07655 cf372a7d97a6114393adf6e9318d820d 408 PANTHER PTHR11808 41 407 1.1E-127 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RR42_RS07655 cf372a7d97a6114393adf6e9318d820d 408 PANTHER PTHR11808:SF45 41 407 1.1E-127 T 23-04-2016 RR42_RS07655 cf372a7d97a6114393adf6e9318d820d 408 Gene3D G3DSA:3.40.640.10 18 265 8.3E-67 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS07655 cf372a7d97a6114393adf6e9318d820d 408 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 38 403 1.1E-123 T 23-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 RR42_RS07655 cf372a7d97a6114393adf6e9318d820d 408 PIRSF PIRSF001434 4 405 1.7E-113 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RR42_RS07655 cf372a7d97a6114393adf6e9318d820d 408 Gene3D G3DSA:3.90.1150.10 268 403 2.3E-33 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS07655 cf372a7d97a6114393adf6e9318d820d 408 SUPERFAMILY SSF53383 43 403 2.53E-93 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS07655 cf372a7d97a6114393adf6e9318d820d 408 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 19 403 2.3E-86 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 Gene3D G3DSA:3.30.2090.10 183 266 7.8E-17 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 Gene3D G3DSA:3.30.2090.10 710 791 7.3E-19 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 Pfam PF00873 AcrB/AcrD/AcrF family 4 1013 0.0 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 PANTHER PTHR32063:SF21 1 1027 0.0 T 23-04-2016 RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 SUPERFAMILY SSF82714 710 791 2.62E-17 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 Gene3D G3DSA:1.10.3850.10 798 1014 3.7E-52 T 23-04-2016 RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 SUPERFAMILY SSF82714 183 266 1.83E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 SUPERFAMILY SSF82693 136 182 5.58E-25 T 23-04-2016 RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 SUPERFAMILY SSF82693 268 324 5.58E-25 T 23-04-2016 RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 Gene3D G3DSA:1.20.1640.10 285 496 2.1E-57 T 23-04-2016 RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 SUPERFAMILY SSF82866 816 1013 9.02E-42 T 23-04-2016 RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 Gene3D G3DSA:3.30.70.1430 559 646 3.3E-8 T 23-04-2016 RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.2E-79 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.2E-79 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 PRINTS PR00702 Acriflavin resistance protein family signature 610 624 1.2E-79 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 1.2E-79 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.2E-79 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.2E-79 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.2E-79 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.2E-79 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.2E-79 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 SUPERFAMILY SSF82693 40 133 4.87E-22 T 23-04-2016 RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 PANTHER PTHR32063 1 1027 0.0 T 23-04-2016 RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 SUPERFAMILY SSF82866 290 490 2.62E-48 T 23-04-2016 RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 SUPERFAMILY SSF82693 667 706 2.72E-11 T 23-04-2016 RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 SUPERFAMILY SSF82693 793 842 2.72E-11 T 23-04-2016 RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 SUPERFAMILY SSF82693 556 653 1.05E-13 T 23-04-2016 RR42_RS03310 63d31e8de9c416e6f4af8066e0b4d371 1057 Gene3D G3DSA:3.30.70.1430 40 142 1.6E-29 T 23-04-2016 RR42_RS10360 aad6a2dc4f207a31e184cc5a2b2a68de 396 Gene3D G3DSA:2.40.160.10 34 396 4.6E-73 T 23-04-2016 IPR023614 Porin domain RR42_RS10360 aad6a2dc4f207a31e184cc5a2b2a68de 396 SUPERFAMILY SSF56935 34 396 1.04E-62 T 23-04-2016 RR42_RS10360 aad6a2dc4f207a31e184cc5a2b2a68de 396 Pfam PF13609 Gram-negative porin 20 361 1.9E-47 T 23-04-2016 RR42_RS12510 1f5e18f101e09696f2288d1afae6991e 301 PANTHER PTHR10992:SF771 25 281 5.7E-35 T 23-04-2016 RR42_RS12510 1f5e18f101e09696f2288d1afae6991e 301 SUPERFAMILY SSF53474 16 279 1.12E-45 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS12510 1f5e18f101e09696f2288d1afae6991e 301 PANTHER PTHR10992 25 281 5.7E-35 T 23-04-2016 RR42_RS12510 1f5e18f101e09696f2288d1afae6991e 301 PRINTS PR00412 Epoxide hydrolase signature 223 239 3.3E-8 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS12510 1f5e18f101e09696f2288d1afae6991e 301 PRINTS PR00412 Epoxide hydrolase signature 100 113 3.3E-8 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS12510 1f5e18f101e09696f2288d1afae6991e 301 PRINTS PR00412 Epoxide hydrolase signature 54 69 3.3E-8 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS12510 1f5e18f101e09696f2288d1afae6991e 301 PRINTS PR00412 Epoxide hydrolase signature 256 278 3.3E-8 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS12510 1f5e18f101e09696f2288d1afae6991e 301 Gene3D G3DSA:3.40.50.1820 22 280 7.2E-48 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS12510 1f5e18f101e09696f2288d1afae6991e 301 Pfam PF12697 Alpha/beta hydrolase family 31 274 4.3E-17 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS10140 1824c5b83507f74ed615612c425731f2 407 Gene3D G3DSA:3.40.640.10 62 279 2.8E-78 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS10140 1824c5b83507f74ed615612c425731f2 407 SUPERFAMILY SSF53383 5 402 2.55E-97 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS10140 1824c5b83507f74ed615612c425731f2 407 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 22 397 2.1E-132 T 23-04-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 RR42_RS10140 1824c5b83507f74ed615612c425731f2 407 PANTHER PTHR13693 4 403 1.4E-152 T 23-04-2016 RR42_RS10140 1824c5b83507f74ed615612c425731f2 407 PANTHER PTHR13693:SF53 4 403 1.4E-152 T 23-04-2016 RR42_RS10140 1824c5b83507f74ed615612c425731f2 407 Pfam PF00155 Aminotransferase class I and II 45 395 3.9E-52 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RR42_RS10140 1824c5b83507f74ed615612c425731f2 407 Gene3D G3DSA:3.90.1150.10 280 399 4.8E-30 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS10140 1824c5b83507f74ed615612c425731f2 407 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 2 401 48.298 T 23-04-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 RR42_RS14545 dd0d623b99f2412a4a6646d6ae413f46 162 Pfam PF13924 Lipocalin-like domain 44 161 3.2E-18 T 23-04-2016 IPR024311 Lipocalin-like domain RR42_RS04260 8ad89ebb2aa5be22a6411e208fa409aa 722 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 487 516 2.7E-5 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RR42_RS04260 8ad89ebb2aa5be22a6411e208fa409aa 722 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 586 615 2.7E-5 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RR42_RS04260 8ad89ebb2aa5be22a6411e208fa409aa 722 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 514 719 1.1E-45 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RR42_RS04260 8ad89ebb2aa5be22a6411e208fa409aa 722 PANTHER PTHR32089:SF43 427 722 3.0E-91 T 23-04-2016 RR42_RS04260 8ad89ebb2aa5be22a6411e208fa409aa 722 SUPERFAMILY SSF58104 420 721 6.8E-63 T 23-04-2016 RR42_RS04260 8ad89ebb2aa5be22a6411e208fa409aa 722 PANTHER PTHR32089 427 722 3.0E-91 T 23-04-2016 RR42_RS04260 8ad89ebb2aa5be22a6411e208fa409aa 722 Gene3D G3DSA:1.10.287.950 473 691 2.5E-49 T 23-04-2016 RR42_RS04260 8ad89ebb2aa5be22a6411e208fa409aa 722 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 203 299 4.7E-6 T 23-04-2016 IPR029095 NarX-like, N-terminal RR42_RS04260 8ad89ebb2aa5be22a6411e208fa409aa 722 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 75 178 1.5E-16 T 23-04-2016 IPR029095 NarX-like, N-terminal RR42_RS04260 8ad89ebb2aa5be22a6411e208fa409aa 722 SMART SM00283 459 720 1.2E-74 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RR42_RS03020 7ac82c8886d8faac56878c6e4fec171f 153 SUPERFAMILY SSF46785 4 144 2.46E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS03020 7ac82c8886d8faac56878c6e4fec171f 153 Pfam PF12802 MarR family 34 93 8.3E-10 T 23-04-2016 RR42_RS03020 7ac82c8886d8faac56878c6e4fec171f 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 1.5E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS03020 7ac82c8886d8faac56878c6e4fec171f 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 1.5E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS03020 7ac82c8886d8faac56878c6e4fec171f 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 1.5E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS03020 7ac82c8886d8faac56878c6e4fec171f 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 1.5E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS03020 7ac82c8886d8faac56878c6e4fec171f 153 Gene3D G3DSA:1.10.10.10 11 144 3.9E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS03020 7ac82c8886d8faac56878c6e4fec171f 153 PANTHER PTHR33164 3 153 1.2E-26 T 23-04-2016 RR42_RS03020 7ac82c8886d8faac56878c6e4fec171f 153 PANTHER PTHR33164:SF16 3 153 1.2E-26 T 23-04-2016 RR42_RS03020 7ac82c8886d8faac56878c6e4fec171f 153 SMART SM00347 28 129 5.4E-13 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS15835 1e61d44836003d5530a7868cfebc0685 305 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 10 302 8.7E-98 T 23-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family RR42_RS15835 1e61d44836003d5530a7868cfebc0685 305 SUPERFAMILY SSF51735 11 303 3.64E-91 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS15835 1e61d44836003d5530a7868cfebc0685 305 PANTHER PTHR10491:SF4 3 304 1.0E-88 T 23-04-2016 RR42_RS15835 1e61d44836003d5530a7868cfebc0685 305 PANTHER PTHR10491 3 304 1.0E-88 T 23-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family RR42_RS15835 1e61d44836003d5530a7868cfebc0685 305 Gene3D G3DSA:3.40.50.720 10 241 2.7E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS15835 1e61d44836003d5530a7868cfebc0685 305 Pfam PF04321 RmlD substrate binding domain 10 303 9.9E-101 T 23-04-2016 IPR029903 RmlD-like substrate binding domain RR42_RS13750 3c62e5a45878af27cc4467035b1e26fb 464 PIRSF PIRSF006060 1 460 2.5E-56 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RR42_RS13750 3c62e5a45878af27cc4467035b1e26fb 464 Pfam PF13520 Amino acid permease 31 424 2.6E-33 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RR42_RS13750 3c62e5a45878af27cc4467035b1e26fb 464 PANTHER PTHR11785 14 452 1.3E-32 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RR42_RS23560 b9dd70208cab8da6f1265ae1ffed16d1 278 SMART SM01011 12 149 2.7E-60 T 23-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 RR42_RS23560 b9dd70208cab8da6f1265ae1ffed16d1 278 SUPERFAMILY SSF55920 167 278 4.58E-28 T 23-04-2016 IPR000994 Peptidase M24, structural domain RR42_RS23560 b9dd70208cab8da6f1265ae1ffed16d1 278 PANTHER PTHR10804 18 278 2.1E-74 T 23-04-2016 RR42_RS23560 b9dd70208cab8da6f1265ae1ffed16d1 278 PANTHER PTHR10804:SF17 18 278 2.1E-74 T 23-04-2016 RR42_RS23560 b9dd70208cab8da6f1265ae1ffed16d1 278 SUPERFAMILY SSF53092 18 187 1.54E-51 T 23-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal RR42_RS23560 b9dd70208cab8da6f1265ae1ffed16d1 278 Pfam PF00557 Metallopeptidase family M24 194 278 5.8E-22 T 23-04-2016 IPR000994 Peptidase M24, structural domain RR42_RS23560 b9dd70208cab8da6f1265ae1ffed16d1 278 Pfam PF05195 Aminopeptidase P, N-terminal domain 18 135 3.3E-36 T 23-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 RR42_RS23560 b9dd70208cab8da6f1265ae1ffed16d1 278 Gene3D G3DSA:3.40.350.10 18 191 4.2E-50 T 23-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RR42_RS23560 b9dd70208cab8da6f1265ae1ffed16d1 278 Gene3D G3DSA:3.90.230.10 192 278 1.2E-26 T 23-04-2016 IPR000994 Peptidase M24, structural domain RR42_RS09735 c888946ce01b8c1be1da4691ee08d88c 927 SMART SM00382 300 491 2.9E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS09735 c888946ce01b8c1be1da4691ee08d88c 927 SMART SM00382 36 224 4.9E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS09735 c888946ce01b8c1be1da4691ee08d88c 927 PANTHER PTHR24220 13 395 1.2E-190 T 23-04-2016 RR42_RS09735 c888946ce01b8c1be1da4691ee08d88c 927 Pfam PF00005 ABC transporter 291 435 2.1E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS09735 c888946ce01b8c1be1da4691ee08d88c 927 Pfam PF00005 ABC transporter 27 174 4.4E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS09735 c888946ce01b8c1be1da4691ee08d88c 927 Pfam PF12698 ABC-2 family transporter protein 580 916 4.2E-42 T 23-04-2016 RR42_RS09735 c888946ce01b8c1be1da4691ee08d88c 927 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS09735 c888946ce01b8c1be1da4691ee08d88c 927 Gene3D G3DSA:3.40.50.300 7 240 3.5E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS09735 c888946ce01b8c1be1da4691ee08d88c 927 Gene3D G3DSA:3.40.50.300 268 498 9.2E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS09735 c888946ce01b8c1be1da4691ee08d88c 927 SUPERFAMILY SSF52540 11 238 1.61E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS09735 c888946ce01b8c1be1da4691ee08d88c 927 SUPERFAMILY SSF52540 266 498 2.27E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS09735 c888946ce01b8c1be1da4691ee08d88c 927 PANTHER PTHR24220:SF388 13 395 1.2E-190 T 23-04-2016 RR42_RS00450 dae17ee885d6016a70fae8e005ef8c94 84 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 82 1.4E-28 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RR42_RS00450 dae17ee885d6016a70fae8e005ef8c94 84 PANTHER PTHR33404 1 82 2.7E-20 T 23-04-2016 RR42_RS00450 dae17ee885d6016a70fae8e005ef8c94 84 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 84 18.325 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RR42_RS00450 dae17ee885d6016a70fae8e005ef8c94 84 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 5.1E-25 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RR42_RS00450 dae17ee885d6016a70fae8e005ef8c94 84 Gene3D G3DSA:3.30.1070.10 35 83 1.3E-19 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RR42_RS00450 dae17ee885d6016a70fae8e005ef8c94 84 SUPERFAMILY SSF55229 35 83 9.94E-14 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RR42_RS08710 eac4b0ea6c38271818700e19d2572e0a 254 SUPERFAMILY SSF51735 6 251 7.75E-79 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS08710 eac4b0ea6c38271818700e19d2572e0a 254 Gene3D G3DSA:3.40.50.720 4 251 5.2E-78 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS08710 eac4b0ea6c38271818700e19d2572e0a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 5.3E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS08710 eac4b0ea6c38271818700e19d2572e0a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 5.3E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS08710 eac4b0ea6c38271818700e19d2572e0a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.3E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS08710 eac4b0ea6c38271818700e19d2572e0a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 5.3E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS08710 eac4b0ea6c38271818700e19d2572e0a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 5.3E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS08710 eac4b0ea6c38271818700e19d2572e0a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 5.3E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS08710 eac4b0ea6c38271818700e19d2572e0a 254 PANTHER PTHR24322 12 138 5.2E-58 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS08710 eac4b0ea6c38271818700e19d2572e0a 254 PANTHER PTHR24322 154 185 5.2E-58 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS08710 eac4b0ea6c38271818700e19d2572e0a 254 PANTHER PTHR24322:SF366 12 138 5.2E-58 T 23-04-2016 RR42_RS08710 eac4b0ea6c38271818700e19d2572e0a 254 PANTHER PTHR24322:SF366 154 185 5.2E-58 T 23-04-2016 RR42_RS08710 eac4b0ea6c38271818700e19d2572e0a 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 250 6.7E-59 T 23-04-2016 RR42_RS08710 eac4b0ea6c38271818700e19d2572e0a 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 189 0.0032 T 23-04-2016 RR42_RS17875 41b8f1f29525d524782846abc95d36f6 697 SUPERFAMILY SSF47384 420 502 1.53E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS17875 41b8f1f29525d524782846abc95d36f6 697 SUPERFAMILY SSF55785 219 324 1.16E-5 T 23-04-2016 IPR000014 PAS domain RR42_RS17875 41b8f1f29525d524782846abc95d36f6 697 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 566 648 1.5E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS17875 41b8f1f29525d524782846abc95d36f6 697 Pfam PF13188 PAS domain 231 296 2.9E-4 T 23-04-2016 IPR000014 PAS domain RR42_RS17875 41b8f1f29525d524782846abc95d36f6 697 SMART SM00388 428 505 4.6E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS17875 41b8f1f29525d524782846abc95d36f6 697 SUPERFAMILY SSF55874 550 654 1.83E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS17875 41b8f1f29525d524782846abc95d36f6 697 Gene3D G3DSA:3.30.565.10 558 648 3.1E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS17875 41b8f1f29525d524782846abc95d36f6 697 Gene3D G3DSA:3.30.565.10 491 520 3.1E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS17875 41b8f1f29525d524782846abc95d36f6 697 Gene3D G3DSA:3.30.450.20 219 272 2.4E-6 T 23-04-2016 RR42_RS17875 41b8f1f29525d524782846abc95d36f6 697 PANTHER PTHR24423 32 41 6.9E-43 T 23-04-2016 RR42_RS17875 41b8f1f29525d524782846abc95d36f6 697 PANTHER PTHR24423 205 322 6.9E-43 T 23-04-2016 RR42_RS17875 41b8f1f29525d524782846abc95d36f6 697 PANTHER PTHR24423 416 526 6.9E-43 T 23-04-2016 RR42_RS17875 41b8f1f29525d524782846abc95d36f6 697 PANTHER PTHR24423 548 661 6.9E-43 T 23-04-2016 RR42_RS17875 41b8f1f29525d524782846abc95d36f6 697 SMART SM00387 565 691 4.0E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS17875 41b8f1f29525d524782846abc95d36f6 697 Gene3D G3DSA:1.10.287.130 422 490 1.4E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS17875 41b8f1f29525d524782846abc95d36f6 697 Pfam PF00512 His Kinase A (phospho-acceptor) domain 428 502 1.3E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 Gene3D G3DSA:1.10.150.20 466 534 1.7E-27 T 23-04-2016 RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 144 173 - T 23-04-2016 IPR018239 NAD-dependent DNA ligase, active site RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 PANTHER PTHR23389:SF9 11 564 6.9E-197 T 23-04-2016 RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 SMART SM00292 625 702 4.6E-16 T 23-04-2016 IPR001357 BRCT domain RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 Gene3D G3DSA:3.40.50.10190 626 701 8.4E-27 T 23-04-2016 IPR001357 BRCT domain RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 SUPERFAMILY SSF50249 349 431 1.44E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 23 349 2.8E-120 T 23-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 362 377 - T 23-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 SUPERFAMILY SSF56091 21 347 7.92E-113 T 23-04-2016 RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 Pfam PF12826 Helix-hairpin-helix motif 541 604 6.9E-24 T 23-04-2016 RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 Gene3D G3DSA:1.10.287.610 17 83 1.6E-29 T 23-04-2016 RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 SMART SM00532 19 479 5.7E-263 T 23-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 Gene3D G3DSA:3.30.470.30 148 283 1.2E-52 T 23-04-2016 RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 SMART SM00278 511 530 510.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 SMART SM00278 543 562 1900.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 SMART SM00278 575 594 9.8 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 SMART SM00278 477 496 13.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 PIRSF PIRSF001604 13 704 2.5E-244 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 Gene3D G3DSA:1.10.150.20 535 615 5.8E-34 T 23-04-2016 RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 439 465 4.8E-11 T 23-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 PANTHER PTHR23389 11 564 6.9E-197 T 23-04-2016 RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 SUPERFAMILY SSF52113 626 700 6.73E-20 T 23-04-2016 IPR001357 BRCT domain RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 SUPERFAMILY SSF47781 434 614 4.45E-63 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 Hamap MF_01588 DNA ligase [ligA]. 18 699 54.661 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 352 429 6.9E-36 T 23-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 27 694 1.8E-255 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 Gene3D G3DSA:2.40.50.140 351 422 3.1E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS11905 8fdf65d3c8b2f6363fb0685531c8b779 708 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 626 699 1.9E-12 T 23-04-2016 IPR001357 BRCT domain RR42_RS02775 48e08f48baa5c7d373df9f3323457426 496 Pfam PF00639 PPIC-type PPIASE domain 239 331 8.7E-16 T 23-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 RR42_RS02775 48e08f48baa5c7d373df9f3323457426 496 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 387 407 - T 23-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site RR42_RS02775 48e08f48baa5c7d373df9f3323457426 496 Hamap MF_01183 Chaperone SurA [surA]. 24 493 31.425 T 23-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 RR42_RS02775 48e08f48baa5c7d373df9f3323457426 496 Pfam PF09312 SurA N-terminal domain 82 199 2.0E-33 T 23-04-2016 IPR015391 SurA N-terminal RR42_RS02775 48e08f48baa5c7d373df9f3323457426 496 Pfam PF13616 PPIC-type PPIASE domain 351 448 1.1E-25 T 23-04-2016 RR42_RS02775 48e08f48baa5c7d373df9f3323457426 496 Gene3D G3DSA:3.10.50.40 230 346 2.6E-24 T 23-04-2016 RR42_RS02775 48e08f48baa5c7d373df9f3323457426 496 Gene3D G3DSA:3.10.50.40 350 471 6.2E-38 T 23-04-2016 RR42_RS02775 48e08f48baa5c7d373df9f3323457426 496 PANTHER PTHR10657 72 491 3.7E-85 T 23-04-2016 RR42_RS02775 48e08f48baa5c7d373df9f3323457426 496 SUPERFAMILY SSF109998 82 262 1.28E-39 T 23-04-2016 IPR027304 Trigger factor/SurA domain RR42_RS02775 48e08f48baa5c7d373df9f3323457426 496 SUPERFAMILY SSF54534 233 335 2.29E-20 T 23-04-2016 RR42_RS02775 48e08f48baa5c7d373df9f3323457426 496 SUPERFAMILY SSF54534 351 450 1.5E-31 T 23-04-2016 RR42_RS02775 48e08f48baa5c7d373df9f3323457426 496 PANTHER PTHR10657:SF16 72 491 3.7E-85 T 23-04-2016 RR42_RS06790 484f6342c1d68844257f4b9f427028cf 547 SUPERFAMILY SSF52540 70 268 6.5E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS06790 484f6342c1d68844257f4b9f427028cf 547 Gene3D G3DSA:3.40.50.300 94 240 3.9E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS06790 484f6342c1d68844257f4b9f427028cf 547 PANTHER PTHR10799:SF709 95 506 1.6E-24 T 23-04-2016 RR42_RS06790 484f6342c1d68844257f4b9f427028cf 547 SUPERFAMILY SSF52540 196 253 5.57E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS06790 484f6342c1d68844257f4b9f427028cf 547 SMART SM00487 90 266 2.0E-6 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RR42_RS06790 484f6342c1d68844257f4b9f427028cf 547 PANTHER PTHR10799 95 506 1.6E-24 T 23-04-2016 RR42_RS06790 484f6342c1d68844257f4b9f427028cf 547 Pfam PF00176 SNF2 family N-terminal domain 109 332 1.2E-10 T 23-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 RR42_RS06790 484f6342c1d68844257f4b9f427028cf 547 SUPERFAMILY SSF52540 350 513 5.57E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS06790 484f6342c1d68844257f4b9f427028cf 547 Gene3D G3DSA:3.40.50.300 392 483 3.7E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18155 655d338ca885e4d112f3310eaa989052 221 PANTHER PTHR30055 21 217 5.8E-26 T 23-04-2016 RR42_RS18155 655d338ca885e4d112f3310eaa989052 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 39 83 7.6E-16 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS18155 655d338ca885e4d112f3310eaa989052 221 SUPERFAMILY SSF46689 27 111 2.0E-20 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS18155 655d338ca885e4d112f3310eaa989052 221 SUPERFAMILY SSF48498 106 217 4.13E-10 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RR42_RS18155 655d338ca885e4d112f3310eaa989052 221 ProSitePatterns PS01081 TetR-type HTH domain signature. 51 81 - T 23-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RR42_RS18155 655d338ca885e4d112f3310eaa989052 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 52 1.7E-9 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS18155 655d338ca885e4d112f3310eaa989052 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 60 83 1.7E-9 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS18155 655d338ca885e4d112f3310eaa989052 221 Gene3D G3DSA:1.10.357.10 30 218 2.4E-37 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS19050 c3398310c784e585bfd9662257e5f9e9 422 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 418 41.409 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS19050 c3398310c784e585bfd9662257e5f9e9 422 PANTHER PTHR11482 4 421 3.5E-169 T 23-04-2016 RR42_RS19050 c3398310c784e585bfd9662257e5f9e9 422 SUPERFAMILY SSF50621 263 419 9.42E-53 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RR42_RS19050 c3398310c784e585bfd9662257e5f9e9 422 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 40 284 3.7E-70 T 23-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 RR42_RS19050 c3398310c784e585bfd9662257e5f9e9 422 Gene3D G3DSA:3.20.20.10 37 266 7.9E-79 T 23-04-2016 IPR029066 PLP-binding barrel RR42_RS19050 c3398310c784e585bfd9662257e5f9e9 422 PRINTS PR01181 Diaminopimelate decarboxylase signature 302 320 1.0E-27 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS19050 c3398310c784e585bfd9662257e5f9e9 422 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 1.0E-27 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS19050 c3398310c784e585bfd9662257e5f9e9 422 PRINTS PR01181 Diaminopimelate decarboxylase signature 385 407 1.0E-27 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS19050 c3398310c784e585bfd9662257e5f9e9 422 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 1.0E-27 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS19050 c3398310c784e585bfd9662257e5f9e9 422 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 417 2.7E-159 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS19050 c3398310c784e585bfd9662257e5f9e9 422 Gene3D G3DSA:2.40.37.10 267 419 9.6E-49 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RR42_RS19050 c3398310c784e585bfd9662257e5f9e9 422 SUPERFAMILY SSF51419 27 286 2.33E-81 T 23-04-2016 IPR029066 PLP-binding barrel RR42_RS19050 c3398310c784e585bfd9662257e5f9e9 422 PANTHER PTHR11482:SF5 4 421 3.5E-169 T 23-04-2016 RR42_RS19050 c3398310c784e585bfd9662257e5f9e9 422 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 300 395 1.1E-17 T 23-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 RR42_RS19050 c3398310c784e585bfd9662257e5f9e9 422 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 1.5E-25 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RR42_RS19050 c3398310c784e585bfd9662257e5f9e9 422 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 375 388 1.5E-25 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RR42_RS19050 c3398310c784e585bfd9662257e5f9e9 422 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 1.5E-25 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RR42_RS19050 c3398310c784e585bfd9662257e5f9e9 422 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 1.5E-25 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RR42_RS19050 c3398310c784e585bfd9662257e5f9e9 422 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 274 293 1.5E-25 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RR42_RS19050 c3398310c784e585bfd9662257e5f9e9 422 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 229 242 - T 23-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 RR42_RS17500 0ddb5135b73b1856991e384bf8e027be 110 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 11 94 8.4E-36 T 23-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 RR42_RS17500 0ddb5135b73b1856991e384bf8e027be 110 PANTHER PTHR10160 10 96 3.2E-33 T 23-04-2016 RR42_RS11445 b68f50533389b5ea54af1741f7332c40 679 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 434 449 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RR42_RS11445 b68f50533389b5ea54af1741f7332c40 679 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 637 654 3.9E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS11445 b68f50533389b5ea54af1741f7332c40 679 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 654 674 3.9E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS11445 b68f50533389b5ea54af1741f7332c40 679 SUPERFAMILY SSF52540 352 587 3.24E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11445 b68f50533389b5ea54af1741f7332c40 679 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 557 566 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RR42_RS11445 b68f50533389b5ea54af1741f7332c40 679 SMART SM00382 367 511 1.8E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS11445 b68f50533389b5ea54af1741f7332c40 679 Pfam PF01590 GAF domain 78 204 3.0E-8 T 23-04-2016 IPR003018 GAF domain GO:0005515 RR42_RS11445 b68f50533389b5ea54af1741f7332c40 679 PANTHER PTHR32071 614 670 2.0E-126 T 23-04-2016 RR42_RS11445 b68f50533389b5ea54af1741f7332c40 679 PANTHER PTHR32071 351 596 2.0E-126 T 23-04-2016 RR42_RS11445 b68f50533389b5ea54af1741f7332c40 679 Gene3D G3DSA:1.10.10.60 628 669 9.3E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS11445 b68f50533389b5ea54af1741f7332c40 679 Pfam PF00158 Sigma-54 interaction domain 351 512 2.3E-64 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RR42_RS11445 b68f50533389b5ea54af1741f7332c40 679 Pfam PF02954 Bacterial regulatory protein, Fis family 631 670 4.6E-13 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS11445 b68f50533389b5ea54af1741f7332c40 679 SUPERFAMILY SSF46689 557 670 2.33E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS11445 b68f50533389b5ea54af1741f7332c40 679 SUPERFAMILY SSF55781 65 205 2.59E-6 T 23-04-2016 IPR029016 GAF domain-like RR42_RS11445 b68f50533389b5ea54af1741f7332c40 679 Gene3D G3DSA:3.40.50.300 351 520 6.6E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11445 b68f50533389b5ea54af1741f7332c40 679 Gene3D G3DSA:1.10.8.60 523 591 6.9E-13 T 23-04-2016 RR42_RS11445 b68f50533389b5ea54af1741f7332c40 679 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 371 384 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RR42_RS08730 aebe12da93ad20ac20f25f3103c2bdfd 161 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 102 157 6.0E-18 T 23-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB RR42_RS08730 aebe12da93ad20ac20f25f3103c2bdfd 161 Pfam PF11776 Nickel/cobalt transporter regulator 106 156 4.8E-24 T 23-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB RR42_RS18825 0fd5e38b1423399355c412650c448e6b 205 PANTHER PTHR10134 10 202 2.2E-73 T 23-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 RR42_RS18825 0fd5e38b1423399355c412650c448e6b 205 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 8 43 2.5E-9 T 23-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 RR42_RS18825 0fd5e38b1423399355c412650c448e6b 205 Gene3D G3DSA:2.102.10.10 17 202 1.7E-40 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RR42_RS18825 0fd5e38b1423399355c412650c448e6b 205 Pfam PF00355 Rieske [2Fe-2S] domain 60 185 1.0E-11 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RR42_RS18825 0fd5e38b1423399355c412650c448e6b 205 PRINTS PR00162 Rieske 2Fe-2S subunit signature 170 182 2.7E-7 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 RR42_RS18825 0fd5e38b1423399355c412650c448e6b 205 PRINTS PR00162 Rieske 2Fe-2S subunit signature 157 169 2.7E-7 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 RR42_RS18825 0fd5e38b1423399355c412650c448e6b 205 PRINTS PR00162 Rieske 2Fe-2S subunit signature 127 138 2.7E-7 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 RR42_RS18825 0fd5e38b1423399355c412650c448e6b 205 SUPERFAMILY SSF50022 33 199 3.67E-38 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RR42_RS18825 0fd5e38b1423399355c412650c448e6b 205 PANTHER PTHR10134:SF8 10 202 2.2E-73 T 23-04-2016 RR42_RS18825 0fd5e38b1423399355c412650c448e6b 205 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 13 198 3.8E-63 T 23-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 RR42_RS20450 94f68d5bd4a4f17ffa5d09e56bdb0c70 450 Gene3D G3DSA:3.40.50.150 243 448 4.0E-48 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS20450 94f68d5bd4a4f17ffa5d09e56bdb0c70 450 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 15 449 2.0E-94 T 23-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RR42_RS20450 94f68d5bd4a4f17ffa5d09e56bdb0c70 450 PANTHER PTHR22807:SF30 129 449 1.2E-76 T 23-04-2016 RR42_RS20450 94f68d5bd4a4f17ffa5d09e56bdb0c70 450 SUPERFAMILY SSF48013 28 162 3.92E-14 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RR42_RS20450 94f68d5bd4a4f17ffa5d09e56bdb0c70 450 Pfam PF01189 16S rRNA methyltransferase RsmB/F 251 447 7.6E-52 T 23-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RR42_RS20450 94f68d5bd4a4f17ffa5d09e56bdb0c70 450 Gene3D G3DSA:1.10.287.730 161 185 6.9E-7 T 23-04-2016 RR42_RS20450 94f68d5bd4a4f17ffa5d09e56bdb0c70 450 Gene3D G3DSA:3.30.70.1170 186 241 1.3E-16 T 23-04-2016 RR42_RS20450 94f68d5bd4a4f17ffa5d09e56bdb0c70 450 Gene3D G3DSA:1.10.940.10 14 160 4.9E-14 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RR42_RS20450 94f68d5bd4a4f17ffa5d09e56bdb0c70 450 SUPERFAMILY SSF53335 154 448 1.09E-66 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS20450 94f68d5bd4a4f17ffa5d09e56bdb0c70 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 262 272 2.8E-25 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RR42_RS20450 94f68d5bd4a4f17ffa5d09e56bdb0c70 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 377 393 2.8E-25 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RR42_RS20450 94f68d5bd4a4f17ffa5d09e56bdb0c70 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 233 247 2.8E-25 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RR42_RS20450 94f68d5bd4a4f17ffa5d09e56bdb0c70 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 327 339 2.8E-25 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RR42_RS20450 94f68d5bd4a4f17ffa5d09e56bdb0c70 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 431 448 2.8E-25 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RR42_RS20450 94f68d5bd4a4f17ffa5d09e56bdb0c70 450 PANTHER PTHR22807 129 449 1.2E-76 T 23-04-2016 RR42_RS20160 da34c0908f545ce94a6d889a9e819ab2 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 339 348 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RR42_RS20160 da34c0908f545ce94a6d889a9e819ab2 467 SUPERFAMILY SSF50615 1 81 1.75E-23 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RR42_RS20160 da34c0908f545ce94a6d889a9e819ab2 467 SUPERFAMILY SSF52540 83 353 1.29E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20160 da34c0908f545ce94a6d889a9e819ab2 467 PANTHER PTHR15184 1 467 0.0 T 23-04-2016 RR42_RS20160 da34c0908f545ce94a6d889a9e819ab2 467 SMART SM00382 148 333 0.0013 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS20160 da34c0908f545ce94a6d889a9e819ab2 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 466 56.471 T 23-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RR42_RS20160 da34c0908f545ce94a6d889a9e819ab2 467 SUPERFAMILY SSF47917 351 466 9.94E-55 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RR42_RS20160 da34c0908f545ce94a6d889a9e819ab2 467 PANTHER PTHR15184:SF44 1 467 0.0 T 23-04-2016 RR42_RS20160 da34c0908f545ce94a6d889a9e819ab2 467 Gene3D G3DSA:3.40.50.300 82 349 1.5E-105 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20160 da34c0908f545ce94a6d889a9e819ab2 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 79 2.3E-18 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RR42_RS20160 da34c0908f545ce94a6d889a9e819ab2 467 Gene3D G3DSA:1.10.1140.10 351 467 2.6E-55 T 23-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RR42_RS20160 da34c0908f545ce94a6d889a9e819ab2 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 466 1.1E-249 T 23-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RR42_RS20160 da34c0908f545ce94a6d889a9e819ab2 467 Gene3D G3DSA:2.40.10.170 2 81 2.1E-27 T 23-04-2016 RR42_RS20160 da34c0908f545ce94a6d889a9e819ab2 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 136 348 1.4E-62 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RR42_RS10490 fab9f2c97a2c7dc78211e44904e17c5a 105 Pfam PF00816 H-NS histone family 6 95 3.3E-24 T 23-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 RR42_RS10490 fab9f2c97a2c7dc78211e44904e17c5a 105 SMART SM00528 64 102 1.2E-6 T 23-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 RR42_RS10490 fab9f2c97a2c7dc78211e44904e17c5a 105 SUPERFAMILY SSF81273 70 102 6.67E-9 T 23-04-2016 RR42_RS10490 fab9f2c97a2c7dc78211e44904e17c5a 105 Gene3D G3DSA:4.10.430.10 72 102 1.2E-5 T 23-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 RR42_RS18160 62165f422e206533727a10c9bc45fe49 576 Pfam PF00501 AMP-binding enzyme 40 477 2.0E-88 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS18160 62165f422e206533727a10c9bc45fe49 576 PANTHER PTHR24096 1 184 2.1E-255 T 23-04-2016 RR42_RS18160 62165f422e206533727a10c9bc45fe49 576 PANTHER PTHR24096 202 570 2.1E-255 T 23-04-2016 RR42_RS18160 62165f422e206533727a10c9bc45fe49 576 Pfam PF13193 AMP-binding enzyme C-terminal domain 486 562 5.3E-16 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RR42_RS18160 62165f422e206533727a10c9bc45fe49 576 Gene3D G3DSA:3.40.50.980 35 163 4.6E-40 T 23-04-2016 RR42_RS18160 62165f422e206533727a10c9bc45fe49 576 Gene3D G3DSA:3.40.50.980 195 227 4.6E-40 T 23-04-2016 RR42_RS18160 62165f422e206533727a10c9bc45fe49 576 Gene3D G3DSA:2.30.38.10 395 467 6.3E-27 T 23-04-2016 RR42_RS18160 62165f422e206533727a10c9bc45fe49 576 Gene3D G3DSA:3.30.300.30 474 574 2.3E-26 T 23-04-2016 RR42_RS18160 62165f422e206533727a10c9bc45fe49 576 PANTHER PTHR24096:SF113 1 184 2.1E-255 T 23-04-2016 RR42_RS18160 62165f422e206533727a10c9bc45fe49 576 PANTHER PTHR24096:SF113 202 570 2.1E-255 T 23-04-2016 RR42_RS18160 62165f422e206533727a10c9bc45fe49 576 ProSitePatterns PS00455 Putative AMP-binding domain signature. 221 232 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS18160 62165f422e206533727a10c9bc45fe49 576 Gene3D G3DSA:3.40.50.980 228 379 2.7E-25 T 23-04-2016 RR42_RS18160 62165f422e206533727a10c9bc45fe49 576 SUPERFAMILY SSF56801 27 572 1.19E-133 T 23-04-2016 RR42_RS11160 e5a8619d851fc34548002ccf7970579c 520 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 17 506 44.229 T 23-04-2016 IPR003846 Uncharacterised protein family UPF0061 RR42_RS11160 e5a8619d851fc34548002ccf7970579c 520 PANTHER PTHR32057 2 520 7.2E-200 T 23-04-2016 RR42_RS11160 e5a8619d851fc34548002ccf7970579c 520 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 23 489 1.4E-134 T 23-04-2016 IPR003846 Uncharacterised protein family UPF0061 RR42_RS05525 924eefa2cee0fa8d99c46d838be7bfbf 417 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 417 49.935 T 23-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 RR42_RS05525 924eefa2cee0fa8d99c46d838be7bfbf 417 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 43 54 - T 23-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 RR42_RS05525 924eefa2cee0fa8d99c46d838be7bfbf 417 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 6 417 2.4E-186 T 23-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 RR42_RS05525 924eefa2cee0fa8d99c46d838be7bfbf 417 PANTHER PTHR11993 3 164 2.8E-238 T 23-04-2016 RR42_RS05525 924eefa2cee0fa8d99c46d838be7bfbf 417 PANTHER PTHR11993 190 412 2.8E-238 T 23-04-2016 RR42_RS05525 924eefa2cee0fa8d99c46d838be7bfbf 417 PANTHER PTHR11993:SF10 3 164 2.8E-238 T 23-04-2016 RR42_RS05525 924eefa2cee0fa8d99c46d838be7bfbf 417 PANTHER PTHR11993:SF10 190 412 2.8E-238 T 23-04-2016 RR42_RS05525 924eefa2cee0fa8d99c46d838be7bfbf 417 Gene3D G3DSA:1.10.645.10 6 404 1.5E-62 T 23-04-2016 IPR029014 NiFe hydrogenase-like RR42_RS05525 924eefa2cee0fa8d99c46d838be7bfbf 417 SUPERFAMILY SSF56762 16 417 2.35E-137 T 23-04-2016 IPR029014 NiFe hydrogenase-like RR42_RS05525 924eefa2cee0fa8d99c46d838be7bfbf 417 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 417 1.5E-123 T 23-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 RR42_RS04080 8ea91ca4bbe4c84d409501be48e031f1 547 Gene3D G3DSA:1.10.560.10 369 518 1.0E-43 T 23-04-2016 IPR027413 GroEL-like equatorial domain RR42_RS04080 8ea91ca4bbe4c84d409501be48e031f1 547 Gene3D G3DSA:1.10.560.10 4 188 1.3E-47 T 23-04-2016 IPR027413 GroEL-like equatorial domain RR42_RS04080 8ea91ca4bbe4c84d409501be48e031f1 547 SUPERFAMILY SSF54849 139 203 6.87E-24 T 23-04-2016 RR42_RS04080 8ea91ca4bbe4c84d409501be48e031f1 547 Gene3D G3DSA:3.50.7.10 189 368 1.7E-99 T 23-04-2016 IPR027409 GroEL-like apical domain RR42_RS04080 8ea91ca4bbe4c84d409501be48e031f1 547 PANTHER PTHR11353 2 547 1.7E-259 T 23-04-2016 RR42_RS04080 8ea91ca4bbe4c84d409501be48e031f1 547 PRINTS PR00298 60kDa chaperonin signature 83 110 8.2E-75 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RR42_RS04080 8ea91ca4bbe4c84d409501be48e031f1 547 PRINTS PR00298 60kDa chaperonin signature 268 291 8.2E-75 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RR42_RS04080 8ea91ca4bbe4c84d409501be48e031f1 547 PRINTS PR00298 60kDa chaperonin signature 398 419 8.2E-75 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RR42_RS04080 8ea91ca4bbe4c84d409501be48e031f1 547 PRINTS PR00298 60kDa chaperonin signature 27 53 8.2E-75 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RR42_RS04080 8ea91ca4bbe4c84d409501be48e031f1 547 PRINTS PR00298 60kDa chaperonin signature 350 375 8.2E-75 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RR42_RS04080 8ea91ca4bbe4c84d409501be48e031f1 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 1.2E-255 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RR42_RS04080 8ea91ca4bbe4c84d409501be48e031f1 547 SUPERFAMILY SSF48592 406 521 1.22E-78 T 23-04-2016 RR42_RS04080 8ea91ca4bbe4c84d409501be48e031f1 547 SUPERFAMILY SSF48592 7 134 1.22E-78 T 23-04-2016 RR42_RS04080 8ea91ca4bbe4c84d409501be48e031f1 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 546 41.797 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RR42_RS04080 8ea91ca4bbe4c84d409501be48e031f1 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 23-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 RR42_RS04080 8ea91ca4bbe4c84d409501be48e031f1 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 4.3E-100 T 23-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 RR42_RS04080 8ea91ca4bbe4c84d409501be48e031f1 547 SUPERFAMILY SSF52029 185 376 2.99E-83 T 23-04-2016 IPR027409 GroEL-like apical domain RR42_RS00325 6780c4af00320c0672646791286e4a35 496 PANTHER PTHR23501 1 496 1.9E-147 T 23-04-2016 RR42_RS00325 6780c4af00320c0672646791286e4a35 496 Gene3D G3DSA:1.20.1250.20 254 412 7.8E-22 T 23-04-2016 RR42_RS00325 6780c4af00320c0672646791286e4a35 496 Gene3D G3DSA:1.20.1250.20 455 479 7.8E-22 T 23-04-2016 RR42_RS00325 6780c4af00320c0672646791286e4a35 496 Gene3D G3DSA:1.20.1250.20 3 174 1.9E-34 T 23-04-2016 RR42_RS00325 6780c4af00320c0672646791286e4a35 496 Pfam PF07690 Major Facilitator Superfamily 7 400 6.4E-53 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS00325 6780c4af00320c0672646791286e4a35 496 PANTHER PTHR23501:SF73 1 496 1.9E-147 T 23-04-2016 RR42_RS00325 6780c4af00320c0672646791286e4a35 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 192 210 2.6E-9 T 23-04-2016 RR42_RS00325 6780c4af00320c0672646791286e4a35 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 126 150 2.6E-9 T 23-04-2016 RR42_RS00325 6780c4af00320c0672646791286e4a35 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 6 30 2.6E-9 T 23-04-2016 RR42_RS00325 6780c4af00320c0672646791286e4a35 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 391 410 2.6E-9 T 23-04-2016 RR42_RS00325 6780c4af00320c0672646791286e4a35 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 96 116 2.6E-9 T 23-04-2016 RR42_RS00325 6780c4af00320c0672646791286e4a35 496 SUPERFAMILY SSF103473 239 410 2.96E-64 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS00325 6780c4af00320c0672646791286e4a35 496 SUPERFAMILY SSF103473 3 190 2.96E-64 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS00325 6780c4af00320c0672646791286e4a35 496 SUPERFAMILY SSF103473 454 478 2.96E-64 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS13890 e109a48b7e0e0f98433d58b3fe660660 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 392 1.7E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS13890 e109a48b7e0e0f98433d58b3fe660660 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 340 354 1.7E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS13890 e109a48b7e0e0f98433d58b3fe660660 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 411 1.7E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS13890 e109a48b7e0e0f98433d58b3fe660660 421 PANTHER PTHR24423 156 417 2.6E-40 T 23-04-2016 RR42_RS13890 e109a48b7e0e0f98433d58b3fe660660 421 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 311 413 8.3E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS13890 e109a48b7e0e0f98433d58b3fe660660 421 SUPERFAMILY SSF47384 198 269 2.94E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS13890 e109a48b7e0e0f98433d58b3fe660660 421 SMART SM00388 215 273 1.8E-4 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS13890 e109a48b7e0e0f98433d58b3fe660660 421 SMART SM00387 305 414 8.6E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS13890 e109a48b7e0e0f98433d58b3fe660660 421 Gene3D G3DSA:1.10.287.130 205 268 1.1E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS13890 e109a48b7e0e0f98433d58b3fe660660 421 Gene3D G3DSA:3.30.565.10 284 418 2.7E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS13890 e109a48b7e0e0f98433d58b3fe660660 421 SUPERFAMILY SSF158472 163 208 6.67E-6 T 23-04-2016 RR42_RS13890 e109a48b7e0e0f98433d58b3fe660660 421 SMART SM00304 162 214 3.4E-6 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS13890 e109a48b7e0e0f98433d58b3fe660660 421 SUPERFAMILY SSF55874 287 414 3.54E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS13890 e109a48b7e0e0f98433d58b3fe660660 421 Pfam PF00672 HAMP domain 149 208 2.4E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS01995 1cf5f3e420f86687b278326e198bb3ee 162 Gene3D G3DSA:3.40.50.620 2 157 6.5E-53 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS01995 1cf5f3e420f86687b278326e198bb3ee 162 Pfam PF01467 Cytidylyltransferase-like 5 133 1.1E-16 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RR42_RS01995 1cf5f3e420f86687b278326e198bb3ee 162 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 57 7.5E-16 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RR42_RS01995 1cf5f3e420f86687b278326e198bb3ee 162 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 35.643 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RR42_RS01995 1cf5f3e420f86687b278326e198bb3ee 162 SUPERFAMILY SSF52374 3 156 6.4E-45 T 23-04-2016 RR42_RS01995 1cf5f3e420f86687b278326e198bb3ee 162 PANTHER PTHR21342:SF1 1 162 1.7E-73 T 23-04-2016 RR42_RS01995 1cf5f3e420f86687b278326e198bb3ee 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 1.7E-47 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RR42_RS01995 1cf5f3e420f86687b278326e198bb3ee 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 1.7E-47 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RR42_RS01995 1cf5f3e420f86687b278326e198bb3ee 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 1.7E-47 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RR42_RS01995 1cf5f3e420f86687b278326e198bb3ee 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 1.7E-47 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RR42_RS01995 1cf5f3e420f86687b278326e198bb3ee 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 1.7E-47 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RR42_RS01995 1cf5f3e420f86687b278326e198bb3ee 162 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 156 6.4E-56 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RR42_RS01995 1cf5f3e420f86687b278326e198bb3ee 162 PANTHER PTHR21342 1 162 1.7E-73 T 23-04-2016 RR42_RS13165 07ddb35e846899bf2b6bc21a105df981 233 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 24 225 1.8E-41 T 23-04-2016 RR42_RS13165 07ddb35e846899bf2b6bc21a105df981 233 PANTHER PTHR23291 17 231 5.0E-37 T 23-04-2016 IPR006214 Bax inhibitor 1-related RR42_RS13165 07ddb35e846899bf2b6bc21a105df981 233 PANTHER PTHR23291:SF37 17 231 5.0E-37 T 23-04-2016 RR42_RS18560 1af8362e4490154f6cbc6ffbf439e91d 465 Pfam PF01554 MatE 43 193 6.8E-10 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RR42_RS18560 1af8362e4490154f6cbc6ffbf439e91d 465 Pfam PF01554 MatE 273 417 1.7E-17 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RR42_RS18560 1af8362e4490154f6cbc6ffbf439e91d 465 PANTHER PTHR11206 2 460 1.0E-44 T 23-04-2016 RR42_RS18560 1af8362e4490154f6cbc6ffbf439e91d 465 PANTHER PTHR11206:SF132 2 460 1.0E-44 T 23-04-2016 RR42_RS16490 8cf2812c0c3eb7a72bbaa76443ddfe41 310 Pfam PF03466 LysR substrate binding domain 96 300 4.5E-31 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS16490 8cf2812c0c3eb7a72bbaa76443ddfe41 310 PANTHER PTHR30537:SF26 1 302 6.1E-85 T 23-04-2016 RR42_RS16490 8cf2812c0c3eb7a72bbaa76443ddfe41 310 Gene3D G3DSA:3.40.190.10 96 179 1.7E-27 T 23-04-2016 RR42_RS16490 8cf2812c0c3eb7a72bbaa76443ddfe41 310 SUPERFAMILY SSF53850 96 303 1.54E-35 T 23-04-2016 RR42_RS16490 8cf2812c0c3eb7a72bbaa76443ddfe41 310 PANTHER PTHR30537 1 302 6.1E-85 T 23-04-2016 RR42_RS16490 8cf2812c0c3eb7a72bbaa76443ddfe41 310 SUPERFAMILY SSF46785 2 86 3.84E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS16490 8cf2812c0c3eb7a72bbaa76443ddfe41 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 6.9E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS16490 8cf2812c0c3eb7a72bbaa76443ddfe41 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.69E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS16490 8cf2812c0c3eb7a72bbaa76443ddfe41 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.69E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS16490 8cf2812c0c3eb7a72bbaa76443ddfe41 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.69E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS16490 8cf2812c0c3eb7a72bbaa76443ddfe41 310 Gene3D G3DSA:1.10.10.10 2 86 3.5E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS16490 8cf2812c0c3eb7a72bbaa76443ddfe41 310 Gene3D G3DSA:3.40.190.10 180 264 3.0E-13 T 23-04-2016 RR42_RS00445 77ec9ee082d031e33ed65e0980b39736 362 Pfam PF13609 Gram-negative porin 7 338 4.3E-47 T 23-04-2016 RR42_RS00445 77ec9ee082d031e33ed65e0980b39736 362 SUPERFAMILY SSF56935 23 362 2.32E-76 T 23-04-2016 RR42_RS00445 77ec9ee082d031e33ed65e0980b39736 362 Gene3D G3DSA:2.40.160.10 23 362 7.4E-84 T 23-04-2016 IPR023614 Porin domain RR42_RS17040 943b8ec4d1c35a3f4d313f45b1b95120 551 PANTHER PTHR24095 1 143 4.3E-136 T 23-04-2016 RR42_RS17040 943b8ec4d1c35a3f4d313f45b1b95120 551 PANTHER PTHR24095 164 521 4.3E-136 T 23-04-2016 RR42_RS17040 943b8ec4d1c35a3f4d313f45b1b95120 551 Gene3D G3DSA:3.40.50.980 181 342 3.9E-43 T 23-04-2016 RR42_RS17040 943b8ec4d1c35a3f4d313f45b1b95120 551 Gene3D G3DSA:3.30.300.30 425 532 4.5E-23 T 23-04-2016 RR42_RS17040 943b8ec4d1c35a3f4d313f45b1b95120 551 Pfam PF13193 AMP-binding enzyme C-terminal domain 439 521 4.2E-8 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RR42_RS17040 943b8ec4d1c35a3f4d313f45b1b95120 551 Gene3D G3DSA:3.40.50.980 2 113 4.8E-31 T 23-04-2016 RR42_RS17040 943b8ec4d1c35a3f4d313f45b1b95120 551 Gene3D G3DSA:3.40.50.980 156 180 4.8E-31 T 23-04-2016 RR42_RS17040 943b8ec4d1c35a3f4d313f45b1b95120 551 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 28 455 1.2E-107 T 23-04-2016 IPR010071 Amino acid adenylation domain RR42_RS17040 943b8ec4d1c35a3f4d313f45b1b95120 551 ProSitePatterns PS00455 Putative AMP-binding domain signature. 171 182 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS17040 943b8ec4d1c35a3f4d313f45b1b95120 551 Pfam PF00501 AMP-binding enzyme 6 431 1.5E-83 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS17040 943b8ec4d1c35a3f4d313f45b1b95120 551 Gene3D G3DSA:2.30.38.10 343 420 6.2E-20 T 23-04-2016 RR42_RS17040 943b8ec4d1c35a3f4d313f45b1b95120 551 SUPERFAMILY SSF56801 2 533 1.83E-128 T 23-04-2016 RR42_RS01150 17af1b160bf7450e1381239b63b5c7ce 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 421 4.0E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS01150 17af1b160bf7450e1381239b63b5c7ce 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 478 4.0E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS01150 17af1b160bf7450e1381239b63b5c7ce 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 435 4.0E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS01150 17af1b160bf7450e1381239b63b5c7ce 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 459 4.0E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS01150 17af1b160bf7450e1381239b63b5c7ce 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 261 319 1.5E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS01150 17af1b160bf7450e1381239b63b5c7ce 480 SUPERFAMILY SSF103190 83 170 1.69E-9 T 23-04-2016 IPR029151 Periplasmic sensor domain-like RR42_RS01150 17af1b160bf7450e1381239b63b5c7ce 480 SMART SM00388 255 320 7.8E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS01150 17af1b160bf7450e1381239b63b5c7ce 480 Pfam PF00672 HAMP domain 188 251 6.6E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS01150 17af1b160bf7450e1381239b63b5c7ce 480 SUPERFAMILY SSF55874 310 479 3.14E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS01150 17af1b160bf7450e1381239b63b5c7ce 480 SMART SM00387 367 480 8.9E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS01150 17af1b160bf7450e1381239b63b5c7ce 480 Gene3D G3DSA:1.10.287.130 258 315 4.2E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS01150 17af1b160bf7450e1381239b63b5c7ce 480 SMART SM00304 204 255 2.7E-4 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS01150 17af1b160bf7450e1381239b63b5c7ce 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 368 479 6.3E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS01150 17af1b160bf7450e1381239b63b5c7ce 480 SUPERFAMILY SSF47384 253 319 5.1E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS01150 17af1b160bf7450e1381239b63b5c7ce 480 PANTHER PTHR24423 69 133 3.7E-67 T 23-04-2016 RR42_RS01150 17af1b160bf7450e1381239b63b5c7ce 480 PANTHER PTHR24423 198 478 3.7E-67 T 23-04-2016 RR42_RS01150 17af1b160bf7450e1381239b63b5c7ce 480 Gene3D G3DSA:3.30.565.10 326 479 8.2E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS17015 dd291b312d92e6029265f5e79db6dea2 301 SUPERFAMILY SSF51690 134 299 5.49E-55 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 RR42_RS17015 dd291b312d92e6029265f5e79db6dea2 301 SUPERFAMILY SSF54675 29 133 1.84E-29 T 23-04-2016 RR42_RS17015 dd291b312d92e6029265f5e79db6dea2 301 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 134 297 5.9E-53 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 RR42_RS17015 dd291b312d92e6029265f5e79db6dea2 301 PIRSF PIRSF006250 27 301 6.2E-89 T 23-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD RR42_RS17015 dd291b312d92e6029265f5e79db6dea2 301 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 44 132 7.3E-23 T 23-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 RR42_RS17015 dd291b312d92e6029265f5e79db6dea2 301 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 36 299 2.9E-87 T 23-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 RR42_RS17015 dd291b312d92e6029265f5e79db6dea2 301 PANTHER PTHR32179 10 301 7.4E-112 T 23-04-2016 RR42_RS17015 dd291b312d92e6029265f5e79db6dea2 301 Gene3D G3DSA:3.90.1170.20 30 154 7.3E-47 T 23-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 RR42_RS17015 dd291b312d92e6029265f5e79db6dea2 301 Gene3D G3DSA:3.20.20.70 155 288 9.9E-54 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS13480 f53aecc0348126bd7eba287774b892c2 287 PANTHER PTHR20941:SF1 10 285 1.8E-113 T 23-04-2016 RR42_RS13480 f53aecc0348126bd7eba287774b892c2 287 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 22 37 - T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 RR42_RS13480 f53aecc0348126bd7eba287774b892c2 287 PANTHER PTHR20941 10 285 1.8E-113 T 23-04-2016 RR42_RS13480 f53aecc0348126bd7eba287774b892c2 287 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 22 278 2.9E-96 T 23-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 RR42_RS13480 f53aecc0348126bd7eba287774b892c2 287 Pfam PF00809 Pterin binding enzyme 23 265 1.2E-84 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 RR42_RS13480 f53aecc0348126bd7eba287774b892c2 287 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 56 69 - T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 RR42_RS13480 f53aecc0348126bd7eba287774b892c2 287 Gene3D G3DSA:3.20.20.20 18 282 5.1E-109 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 RR42_RS13480 f53aecc0348126bd7eba287774b892c2 287 SUPERFAMILY SSF51717 8 282 4.58E-99 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 RR42_RS02810 8932edeab731e02ea2cd6ef1cb72b958 250 SMART SM00563 75 191 2.8E-21 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RR42_RS02810 8932edeab731e02ea2cd6ef1cb72b958 250 Pfam PF01553 Acyltransferase 60 188 4.3E-17 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RR42_RS02810 8932edeab731e02ea2cd6ef1cb72b958 250 PANTHER PTHR10434 1 244 1.4E-48 T 23-04-2016 RR42_RS02810 8932edeab731e02ea2cd6ef1cb72b958 250 Gene3D G3DSA:3.40.1130.10 63 230 1.0E-19 T 23-04-2016 RR42_RS02810 8932edeab731e02ea2cd6ef1cb72b958 250 SUPERFAMILY SSF69593 5 245 7.32E-38 T 23-04-2016 RR42_RS06120 b6620f05747a0801f7dc71b039ec7bc0 312 Pfam PF01380 SIS domain 122 248 2.3E-21 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RR42_RS06120 b6620f05747a0801f7dc71b039ec7bc0 312 Gene3D G3DSA:1.10.10.10 2 77 3.3E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS06120 b6620f05747a0801f7dc71b039ec7bc0 312 PANTHER PTHR30514:SF1 1 294 4.0E-74 T 23-04-2016 RR42_RS06120 b6620f05747a0801f7dc71b039ec7bc0 312 Gene3D G3DSA:3.40.50.10490 92 258 1.3E-37 T 23-04-2016 RR42_RS06120 b6620f05747a0801f7dc71b039ec7bc0 312 PANTHER PTHR30514 1 294 4.0E-74 T 23-04-2016 RR42_RS06120 b6620f05747a0801f7dc71b039ec7bc0 312 SUPERFAMILY SSF53697 89 275 1.88E-40 T 23-04-2016 RR42_RS06120 b6620f05747a0801f7dc71b039ec7bc0 312 SUPERFAMILY SSF46689 3 76 4.48E-20 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS06120 b6620f05747a0801f7dc71b039ec7bc0 312 Pfam PF01418 Helix-turn-helix domain, rpiR family 5 71 1.3E-18 T 23-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RR42_RS18180 0079eb9fe00e21613808d791e0dc7d9f 700 Gene3D G3DSA:2.40.40.20 551 697 6.1E-44 T 23-04-2016 RR42_RS18180 0079eb9fe00e21613808d791e0dc7d9f 700 Gene3D G3DSA:3.40.50.740 63 135 1.6E-13 T 23-04-2016 RR42_RS18180 0079eb9fe00e21613808d791e0dc7d9f 700 Gene3D G3DSA:3.40.50.740 327 545 1.2E-36 T 23-04-2016 RR42_RS18180 0079eb9fe00e21613808d791e0dc7d9f 700 Gene3D G3DSA:2.20.25.90 3 62 3.5E-18 T 23-04-2016 RR42_RS18180 0079eb9fe00e21613808d791e0dc7d9f 700 SMART SM00926 3 58 2.0E-18 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RR42_RS18180 0079eb9fe00e21613808d791e0dc7d9f 700 SUPERFAMILY SSF50692 539 692 5.65E-38 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain RR42_RS18180 0079eb9fe00e21613808d791e0dc7d9f 700 PANTHER PTHR11615:SF127 4 694 5.5E-200 T 23-04-2016 RR42_RS18180 0079eb9fe00e21613808d791e0dc7d9f 700 Pfam PF01568 Molydopterin dinucleotide binding domain 578 687 5.7E-22 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RR42_RS18180 0079eb9fe00e21613808d791e0dc7d9f 700 PANTHER PTHR11615 4 694 5.5E-200 T 23-04-2016 RR42_RS18180 0079eb9fe00e21613808d791e0dc7d9f 700 Pfam PF00384 Molybdopterin oxidoreductase 61 478 5.4E-48 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RR42_RS18180 0079eb9fe00e21613808d791e0dc7d9f 700 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 5 58 5.2E-12 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RR42_RS18180 0079eb9fe00e21613808d791e0dc7d9f 700 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 423 440 - T 23-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RR42_RS18180 0079eb9fe00e21613808d791e0dc7d9f 700 SUPERFAMILY SSF53706 4 579 5.37E-169 T 23-04-2016 RR42_RS18180 0079eb9fe00e21613808d791e0dc7d9f 700 Gene3D G3DSA:3.40.228.10 137 326 4.6E-59 T 23-04-2016 RR42_RS17055 09daf94b1693e2c25ac031c90c8b585f 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 172 199 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS17055 09daf94b1693e2c25ac031c90c8b585f 219 SUPERFAMILY SSF52172 6 139 4.27E-24 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS17055 09daf94b1693e2c25ac031c90c8b585f 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 209 1.2E-14 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS17055 09daf94b1693e2c25ac031c90c8b585f 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 1.6E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS17055 09daf94b1693e2c25ac031c90c8b585f 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 1.6E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS17055 09daf94b1693e2c25ac031c90c8b585f 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 1.6E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS17055 09daf94b1693e2c25ac031c90c8b585f 219 SUPERFAMILY SSF46894 149 216 4.08E-17 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS17055 09daf94b1693e2c25ac031c90c8b585f 219 SMART SM00448 6 120 1.2E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS17055 09daf94b1693e2c25ac031c90c8b585f 219 Gene3D G3DSA:3.40.50.2300 6 131 1.6E-27 T 23-04-2016 RR42_RS17055 09daf94b1693e2c25ac031c90c8b585f 219 PANTHER PTHR26402 6 207 1.1E-45 T 23-04-2016 RR42_RS17055 09daf94b1693e2c25ac031c90c8b585f 219 Gene3D G3DSA:1.10.10.10 156 214 5.9E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS17055 09daf94b1693e2c25ac031c90c8b585f 219 Pfam PF00072 Response regulator receiver domain 9 120 9.0E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS17055 09daf94b1693e2c25ac031c90c8b585f 219 SMART SM00421 155 212 2.7E-18 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS06115 8212d01a565d75a22e8f8781998cc9ab 812 PANTHER PTHR30619:SF2 1 807 2.5E-158 T 23-04-2016 RR42_RS06115 8212d01a565d75a22e8f8781998cc9ab 812 Pfam PF13567 Domain of unknown function (DUF4131) 10 177 4.5E-25 T 23-04-2016 IPR025405 Domain of unknown function DUF4131 RR42_RS06115 8212d01a565d75a22e8f8781998cc9ab 812 SMART SM00849 543 751 2.8E-11 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS06115 8212d01a565d75a22e8f8781998cc9ab 812 SUPERFAMILY SSF56281 532 804 3.5E-41 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS06115 8212d01a565d75a22e8f8781998cc9ab 812 Pfam PF00753 Metallo-beta-lactamase superfamily 542 621 8.2E-9 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS06115 8212d01a565d75a22e8f8781998cc9ab 812 Pfam PF03772 Competence protein 221 502 1.5E-59 T 23-04-2016 IPR004477 ComEC/Rec2-related protein RR42_RS06115 8212d01a565d75a22e8f8781998cc9ab 812 Gene3D G3DSA:3.60.15.10 533 761 1.6E-27 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS06115 8212d01a565d75a22e8f8781998cc9ab 812 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 242 438 6.8E-23 T 23-04-2016 IPR004477 ComEC/Rec2-related protein RR42_RS06115 8212d01a565d75a22e8f8781998cc9ab 812 PANTHER PTHR30619 1 807 2.5E-158 T 23-04-2016 RR42_RS06115 8212d01a565d75a22e8f8781998cc9ab 812 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 121 780 1.8E-97 T 23-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 RR42_RS27115 5e8b9592ff7c53234685e10d20146fa1 242 Pfam PF00106 short chain dehydrogenase 51 240 2.1E-54 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS27115 5e8b9592ff7c53234685e10d20146fa1 242 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 51 242 1.9E-93 T 23-04-2016 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 RR42_RS27115 5e8b9592ff7c53234685e10d20146fa1 242 SUPERFAMILY SSF51735 48 239 8.28E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS27115 5e8b9592ff7c53234685e10d20146fa1 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 199 218 8.5E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS27115 5e8b9592ff7c53234685e10d20146fa1 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 137 8.5E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS27115 5e8b9592ff7c53234685e10d20146fa1 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 179 187 8.5E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS27115 5e8b9592ff7c53234685e10d20146fa1 242 PANTHER PTHR24322 55 183 6.0E-54 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS27115 5e8b9592ff7c53234685e10d20146fa1 242 PANTHER PTHR24322 199 231 6.0E-54 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS27115 5e8b9592ff7c53234685e10d20146fa1 242 PANTHER PTHR24322:SF328 55 183 6.0E-54 T 23-04-2016 RR42_RS27115 5e8b9592ff7c53234685e10d20146fa1 242 PANTHER PTHR24322:SF328 199 231 6.0E-54 T 23-04-2016 RR42_RS27115 5e8b9592ff7c53234685e10d20146fa1 242 Gene3D G3DSA:3.40.50.720 44 240 1.6E-65 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS27115 5e8b9592ff7c53234685e10d20146fa1 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 186 214 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RR42_RS27115 5e8b9592ff7c53234685e10d20146fa1 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 52 69 6.3E-33 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS27115 5e8b9592ff7c53234685e10d20146fa1 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 189 6.3E-33 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS27115 5e8b9592ff7c53234685e10d20146fa1 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 218 6.3E-33 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS27115 5e8b9592ff7c53234685e10d20146fa1 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 237 6.3E-33 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS27115 5e8b9592ff7c53234685e10d20146fa1 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 137 6.3E-33 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS24635 b56122e30c20ca361409b4b9e08b7890 228 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 143 221 2.0E-13 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS24635 b56122e30c20ca361409b4b9e08b7890 228 Gene3D G3DSA:3.30.365.10 97 227 1.4E-22 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS24635 b56122e30c20ca361409b4b9e08b7890 228 PANTHER PTHR11908:SF2 1 228 1.2E-38 T 23-04-2016 RR42_RS24635 b56122e30c20ca361409b4b9e08b7890 228 PANTHER PTHR11908 1 228 1.2E-38 T 23-04-2016 RR42_RS24635 b56122e30c20ca361409b4b9e08b7890 228 SUPERFAMILY SSF56003 39 227 1.7E-49 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS24635 b56122e30c20ca361409b4b9e08b7890 228 Gene3D G3DSA:3.30.365.10 38 96 9.5E-12 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS08325 4c47b19625d477cb02da67ffa425abdb 374 SUPERFAMILY SSF69279 11 196 5.1E-27 T 23-04-2016 RR42_RS08325 4c47b19625d477cb02da67ffa425abdb 374 Gene3D G3DSA:2.30.300.10 15 133 1.5E-5 T 23-04-2016 RR42_RS16925 0a43c3417b08b22534079d1daf40c96f 257 SMART SM00345 23 82 1.4E-21 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS16925 0a43c3417b08b22534079d1daf40c96f 257 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 19 248 3.9E-89 T 23-04-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 UniPathway: UPA00379 RR42_RS16925 0a43c3417b08b22534079d1daf40c96f 257 PANTHER PTHR11751:SF364 127 145 1.0E-31 T 23-04-2016 RR42_RS16925 0a43c3417b08b22534079d1daf40c96f 257 PANTHER PTHR11751:SF364 14 89 1.0E-31 T 23-04-2016 RR42_RS16925 0a43c3417b08b22534079d1daf40c96f 257 Gene3D G3DSA:3.40.1410.10 100 239 1.1E-48 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RR42_RS16925 0a43c3417b08b22534079d1daf40c96f 257 Gene3D G3DSA:1.10.10.10 16 89 9.2E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS16925 0a43c3417b08b22534079d1daf40c96f 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 3.9E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS16925 0a43c3417b08b22534079d1daf40c96f 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 3.9E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS16925 0a43c3417b08b22534079d1daf40c96f 257 PANTHER PTHR11751 127 145 1.0E-31 T 23-04-2016 RR42_RS16925 0a43c3417b08b22534079d1daf40c96f 257 PANTHER PTHR11751 14 89 1.0E-31 T 23-04-2016 RR42_RS16925 0a43c3417b08b22534079d1daf40c96f 257 SUPERFAMILY SSF46785 16 86 1.82E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS16925 0a43c3417b08b22534079d1daf40c96f 257 SMART SM00866 103 243 2.1E-35 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RR42_RS16925 0a43c3417b08b22534079d1daf40c96f 257 SUPERFAMILY SSF64288 70 249 4.71E-43 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RR42_RS16925 0a43c3417b08b22534079d1daf40c96f 257 Pfam PF07702 UTRA domain 104 243 3.0E-34 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RR42_RS16925 0a43c3417b08b22534079d1daf40c96f 257 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 82 3.0E-21 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS04575 824ad92b299d4d62d66087a0b9db622a 311 SUPERFAMILY SSF52467 187 310 2.65E-46 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RR42_RS04575 824ad92b299d4d62d66087a0b9db622a 311 PANTHER PTHR10909 104 307 3.9E-115 T 23-04-2016 RR42_RS04575 824ad92b299d4d62d66087a0b9db622a 311 PANTHER PTHR10909:SF294 104 307 3.9E-115 T 23-04-2016 RR42_RS04575 824ad92b299d4d62d66087a0b9db622a 311 SUPERFAMILY SSF52402 3 186 4.05E-58 T 23-04-2016 RR42_RS04575 824ad92b299d4d62d66087a0b9db622a 311 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 273 8.7E-35 T 23-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal RR42_RS04575 824ad92b299d4d62d66087a0b9db622a 311 Pfam PF01012 Electron transfer flavoprotein domain 4 169 2.3E-38 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RR42_RS04575 824ad92b299d4d62d66087a0b9db622a 311 Gene3D G3DSA:3.40.50.620 1 182 8.3E-64 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS04575 824ad92b299d4d62d66087a0b9db622a 311 SMART SM00893 3 182 4.8E-56 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RR42_RS04575 824ad92b299d4d62d66087a0b9db622a 311 Gene3D G3DSA:3.40.50.1220 184 310 8.8E-60 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RR42_RS04575 824ad92b299d4d62d66087a0b9db622a 311 PIRSF PIRSF000089 1 311 8.4E-103 T 23-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 RR42_RS04575 824ad92b299d4d62d66087a0b9db622a 311 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 254 280 - T 23-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site RR42_RS07405 4dcd7afeab3df8b346cca66a3ef9ba30 233 PANTHER PTHR23026:SF90 12 232 2.0E-37 T 23-04-2016 RR42_RS07405 4dcd7afeab3df8b346cca66a3ef9ba30 233 SUPERFAMILY SSF55469 13 231 1.24E-48 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 RR42_RS07405 4dcd7afeab3df8b346cca66a3ef9ba30 233 PANTHER PTHR23026 12 232 2.0E-37 T 23-04-2016 RR42_RS07405 4dcd7afeab3df8b346cca66a3ef9ba30 233 Gene3D G3DSA:3.40.109.10 12 90 6.2E-45 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 RR42_RS07405 4dcd7afeab3df8b346cca66a3ef9ba30 233 Gene3D G3DSA:3.40.109.10 134 231 6.2E-45 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 RR42_RS07405 4dcd7afeab3df8b346cca66a3ef9ba30 233 Pfam PF00881 Nitroreductase family 16 208 3.7E-35 T 23-04-2016 IPR029479 Nitroreductase RR42_RS15685 00714b28ca478d13fbe990704d6c21f0 355 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 99 339 1.2E-40 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 RR42_RS15685 00714b28ca478d13fbe990704d6c21f0 355 PANTHER PTHR30160 25 315 3.1E-56 T 23-04-2016 RR42_RS15685 00714b28ca478d13fbe990704d6c21f0 355 Gene3D G3DSA:3.40.50.2000 208 341 8.8E-29 T 23-04-2016 RR42_RS15685 00714b28ca478d13fbe990704d6c21f0 355 PANTHER PTHR30160:SF8 25 315 3.1E-56 T 23-04-2016 RR42_RS15685 00714b28ca478d13fbe990704d6c21f0 355 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 25 349 5.9E-98 T 23-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 RR42_RS15685 00714b28ca478d13fbe990704d6c21f0 355 Gene3D G3DSA:3.40.50.2000 25 187 1.3E-37 T 23-04-2016 RR42_RS15685 00714b28ca478d13fbe990704d6c21f0 355 SUPERFAMILY SSF53756 25 349 1.08E-64 T 23-04-2016 RR42_RS09555 1331a53b647af9935787b8dbaf614a1c 166 Pfam PF00582 Universal stress protein family 1 146 3.7E-32 T 23-04-2016 IPR006016 UspA GO:0006950 RR42_RS09555 1331a53b647af9935787b8dbaf614a1c 166 PRINTS PR01438 Universal stress protein signature 106 118 5.4E-21 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS09555 1331a53b647af9935787b8dbaf614a1c 166 PRINTS PR01438 Universal stress protein signature 2 20 5.4E-21 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS09555 1331a53b647af9935787b8dbaf614a1c 166 PRINTS PR01438 Universal stress protein signature 124 146 5.4E-21 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS09555 1331a53b647af9935787b8dbaf614a1c 166 PIRSF PIRSF006276 1 149 2.7E-20 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS09555 1331a53b647af9935787b8dbaf614a1c 166 SUPERFAMILY SSF52402 1 146 1.34E-36 T 23-04-2016 RR42_RS09555 1331a53b647af9935787b8dbaf614a1c 166 PANTHER PTHR31964 1 166 2.2E-35 T 23-04-2016 RR42_RS09555 1331a53b647af9935787b8dbaf614a1c 166 PANTHER PTHR31964:SF26 1 166 2.2E-35 T 23-04-2016 RR42_RS09555 1331a53b647af9935787b8dbaf614a1c 166 Gene3D G3DSA:3.40.50.620 1 149 4.5E-39 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS08765 d09276a296d0644857640fcaf630d883 643 PANTHER PTHR24421 438 643 7.0E-43 T 23-04-2016 RR42_RS08765 d09276a296d0644857640fcaf630d883 643 PANTHER PTHR24421 11 308 7.0E-43 T 23-04-2016 RR42_RS08765 d09276a296d0644857640fcaf630d883 643 SUPERFAMILY SSF55874 523 643 2.26E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS08765 d09276a296d0644857640fcaf630d883 643 Pfam PF07730 Histidine kinase 443 509 2.6E-12 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RR42_RS08765 d09276a296d0644857640fcaf630d883 643 Pfam PF13581 Histidine kinase-like ATPase domain 536 637 7.1E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS08765 d09276a296d0644857640fcaf630d883 643 SMART SM00065 282 436 8.9E-7 T 23-04-2016 IPR003018 GAF domain GO:0005515 RR42_RS08765 d09276a296d0644857640fcaf630d883 643 SMART SM00304 195 247 2.6E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS08765 d09276a296d0644857640fcaf630d883 643 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 38 147 2.0E-25 T 23-04-2016 IPR029095 NarX-like, N-terminal RR42_RS08765 d09276a296d0644857640fcaf630d883 643 SUPERFAMILY SSF55781 282 439 3.05E-15 T 23-04-2016 IPR029016 GAF domain-like RR42_RS08765 d09276a296d0644857640fcaf630d883 643 SUPERFAMILY SSF158472 196 245 4.18E-9 T 23-04-2016 RR42_RS08765 d09276a296d0644857640fcaf630d883 643 Pfam PF13185 GAF domain 284 427 1.9E-9 T 23-04-2016 IPR003018 GAF domain GO:0005515 RR42_RS08765 d09276a296d0644857640fcaf630d883 643 SMART SM00387 550 643 0.0073 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS08765 d09276a296d0644857640fcaf630d883 643 PIRSF PIRSF003167 4 643 6.4E-190 T 23-04-2016 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 RR42_RS08765 d09276a296d0644857640fcaf630d883 643 Gene3D G3DSA:3.30.565.10 514 642 3.3E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS08765 d09276a296d0644857640fcaf630d883 643 Pfam PF00672 HAMP domain 179 243 5.5E-10 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS08765 d09276a296d0644857640fcaf630d883 643 PANTHER PTHR24421:SF25 438 643 7.0E-43 T 23-04-2016 RR42_RS08765 d09276a296d0644857640fcaf630d883 643 PANTHER PTHR24421:SF25 11 308 7.0E-43 T 23-04-2016 RR42_RS08765 d09276a296d0644857640fcaf630d883 643 Gene3D G3DSA:3.30.450.40 256 438 5.1E-20 T 23-04-2016 IPR029016 GAF domain-like RR42_RS12905 fdfc4b6b9191052a619e76357541e536 225 Gene3D G3DSA:1.10.760.10 21 202 1.7E-35 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS12905 fdfc4b6b9191052a619e76357541e536 225 PANTHER PTHR10422 26 166 2.4E-80 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS12905 fdfc4b6b9191052a619e76357541e536 225 PANTHER PTHR10422:SF23 26 166 2.4E-80 T 23-04-2016 RR42_RS12905 fdfc4b6b9191052a619e76357541e536 225 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 10 187 3.8E-79 T 23-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO RR42_RS12905 fdfc4b6b9191052a619e76357541e536 225 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 10 185 3.0E-81 T 23-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO RR42_RS12905 fdfc4b6b9191052a619e76357541e536 225 SUPERFAMILY SSF46626 22 201 2.3E-26 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS01005 27e8b284717c85240e87c6207160a47b 528 Gene3D G3DSA:3.40.190.10 189 304 3.8E-37 T 23-04-2016 RR42_RS01005 27e8b284717c85240e87c6207160a47b 528 Gene3D G3DSA:3.90.76.10 39 188 7.0E-39 T 23-04-2016 RR42_RS01005 27e8b284717c85240e87c6207160a47b 528 SUPERFAMILY SSF53850 30 510 3.8E-128 T 23-04-2016 RR42_RS01005 27e8b284717c85240e87c6207160a47b 528 Gene3D G3DSA:3.10.105.10 305 499 6.8E-55 T 23-04-2016 RR42_RS01005 27e8b284717c85240e87c6207160a47b 528 PIRSF PIRSF002741 6 526 1.6E-98 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RR42_RS01005 27e8b284717c85240e87c6207160a47b 528 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 72 440 1.2E-90 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain RR42_RS01005 27e8b284717c85240e87c6207160a47b 528 PANTHER PTHR30290 296 510 4.8E-123 T 23-04-2016 RR42_RS01005 27e8b284717c85240e87c6207160a47b 528 PANTHER PTHR30290 1 279 4.8E-123 T 23-04-2016 RR42_RS04975 3e325fc9575f70357476290a4d0f79b4 491 Pfam PF00990 Diguanylate cyclase, GGDEF domain 331 478 1.4E-32 T 23-04-2016 IPR000160 GGDEF domain RR42_RS04975 3e325fc9575f70357476290a4d0f79b4 491 SMART SM00267 319 482 1.0E-38 T 23-04-2016 IPR000160 GGDEF domain RR42_RS04975 3e325fc9575f70357476290a4d0f79b4 491 PANTHER PTHR10799 359 491 4.6E-14 T 23-04-2016 RR42_RS04975 3e325fc9575f70357476290a4d0f79b4 491 Gene3D G3DSA:3.30.450.20 10 31 9.8E-7 T 23-04-2016 RR42_RS04975 3e325fc9575f70357476290a4d0f79b4 491 Gene3D G3DSA:3.30.450.20 66 157 9.8E-7 T 23-04-2016 RR42_RS04975 3e325fc9575f70357476290a4d0f79b4 491 SUPERFAMILY SSF55073 335 478 1.96E-32 T 23-04-2016 IPR029787 Nucleotide cyclase RR42_RS04975 3e325fc9575f70357476290a4d0f79b4 491 Gene3D G3DSA:3.30.70.270 332 479 8.8E-37 T 23-04-2016 RR42_RS04975 3e325fc9575f70357476290a4d0f79b4 491 SUPERFAMILY SSF55785 211 322 5.44E-9 T 23-04-2016 IPR000014 PAS domain RR42_RS04975 3e325fc9575f70357476290a4d0f79b4 491 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 327 478 6.3E-31 T 23-04-2016 IPR000160 GGDEF domain RR42_RS04975 3e325fc9575f70357476290a4d0f79b4 491 Pfam PF13188 PAS domain 175 270 1.5E-7 T 23-04-2016 IPR000014 PAS domain RR42_RS04975 3e325fc9575f70357476290a4d0f79b4 491 Pfam PF13188 PAS domain 13 110 2.1E-4 T 23-04-2016 IPR000014 PAS domain RR42_RS04975 3e325fc9575f70357476290a4d0f79b4 491 Gene3D G3DSA:3.30.450.20 224 319 3.0E-10 T 23-04-2016 RR42_RS04975 3e325fc9575f70357476290a4d0f79b4 491 Gene3D G3DSA:3.30.450.20 162 189 3.0E-10 T 23-04-2016 RR42_RS04975 3e325fc9575f70357476290a4d0f79b4 491 SUPERFAMILY SSF55785 62 168 3.62E-7 T 23-04-2016 IPR000014 PAS domain RR42_RS10215 dab4be034661294d668b55a86fc6397f 369 SUPERFAMILY SSF51395 11 368 7.63E-119 T 23-04-2016 RR42_RS10215 dab4be034661294d668b55a86fc6397f 369 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 13 345 5.6E-90 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RR42_RS10215 dab4be034661294d668b55a86fc6397f 369 PANTHER PTHR22893 3 367 3.1E-171 T 23-04-2016 RR42_RS10215 dab4be034661294d668b55a86fc6397f 369 PANTHER PTHR22893:SF14 3 367 3.1E-171 T 23-04-2016 RR42_RS10215 dab4be034661294d668b55a86fc6397f 369 Gene3D G3DSA:3.20.20.70 11 367 3.3E-129 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS10795 457ba95e4214abe0d834f269f1ca3cc2 348 SUPERFAMILY SSF46785 1 85 3.4E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS10795 457ba95e4214abe0d834f269f1ca3cc2 348 SUPERFAMILY SSF53850 90 309 1.48E-24 T 23-04-2016 RR42_RS10795 457ba95e4214abe0d834f269f1ca3cc2 348 PANTHER PTHR30427:SF1 1 308 1.9E-76 T 23-04-2016 RR42_RS10795 457ba95e4214abe0d834f269f1ca3cc2 348 PANTHER PTHR30427 1 308 1.9E-76 T 23-04-2016 RR42_RS10795 457ba95e4214abe0d834f269f1ca3cc2 348 Gene3D G3DSA:3.40.190.10 188 275 1.3E-18 T 23-04-2016 RR42_RS10795 457ba95e4214abe0d834f269f1ca3cc2 348 Gene3D G3DSA:3.40.190.10 134 187 5.8E-5 T 23-04-2016 RR42_RS10795 457ba95e4214abe0d834f269f1ca3cc2 348 Gene3D G3DSA:1.10.10.10 1 86 1.1E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS10795 457ba95e4214abe0d834f269f1ca3cc2 348 Pfam PF03466 LysR substrate binding domain 87 304 3.4E-27 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS10795 457ba95e4214abe0d834f269f1ca3cc2 348 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.0E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS10795 457ba95e4214abe0d834f269f1ca3cc2 348 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.8E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS10795 457ba95e4214abe0d834f269f1ca3cc2 348 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.8E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS10795 457ba95e4214abe0d834f269f1ca3cc2 348 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.8E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS06645 61aa948e9f938ce2915e62a15e5aca9d 365 Pfam PF00589 Phage integrase family 205 351 2.7E-13 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RR42_RS06645 61aa948e9f938ce2915e62a15e5aca9d 365 PANTHER PTHR30349:SF20 130 349 6.6E-13 T 23-04-2016 RR42_RS06645 61aa948e9f938ce2915e62a15e5aca9d 365 SUPERFAMILY SSF56349 75 349 3.06E-41 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RR42_RS06645 61aa948e9f938ce2915e62a15e5aca9d 365 PANTHER PTHR30349 130 349 6.6E-13 T 23-04-2016 RR42_RS06645 61aa948e9f938ce2915e62a15e5aca9d 365 Gene3D G3DSA:1.10.443.10 178 349 7.0E-28 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RR42_RS06645 61aa948e9f938ce2915e62a15e5aca9d 365 Gene3D G3DSA:1.10.150.130 83 163 7.9E-7 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal RR42_RS14670 955ed00e583f6a6504597bb743237e51 246 Gene3D G3DSA:1.10.530.10 80 219 2.9E-46 T 23-04-2016 RR42_RS14670 955ed00e583f6a6504597bb743237e51 246 Pfam PF13511 Domain of unknown function (DUF4124) 7 34 1.1E-4 T 23-04-2016 IPR025392 Domain of unknown function DUF4124 RR42_RS14670 955ed00e583f6a6504597bb743237e51 246 SUPERFAMILY SSF53955 84 221 1.56E-43 T 23-04-2016 IPR023346 Lysozyme-like domain RR42_RS14670 955ed00e583f6a6504597bb743237e51 246 PANTHER PTHR21666 74 219 4.3E-35 T 23-04-2016 RR42_RS14670 955ed00e583f6a6504597bb743237e51 246 Pfam PF01464 Transglycosylase SLT domain 89 197 3.6E-29 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 RR42_RS14670 955ed00e583f6a6504597bb743237e51 246 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 107 135 - T 23-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 RR42_RS02965 f86e6d4d0f5e0f8f96a34d37013927ad 552 Gene3D G3DSA:3.40.1080.10 48 233 3.1E-8 T 23-04-2016 RR42_RS02965 f86e6d4d0f5e0f8f96a34d37013927ad 552 SUPERFAMILY SSF100950 232 504 1.54E-21 T 23-04-2016 RR42_RS02965 f86e6d4d0f5e0f8f96a34d37013927ad 552 PANTHER PTHR13707:SF27 82 274 9.7E-87 T 23-04-2016 RR42_RS02965 f86e6d4d0f5e0f8f96a34d37013927ad 552 Pfam PF16957 Malonate decarboxylase, alpha subunit, transporter 9 552 1.2E-293 T 23-04-2016 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 RR42_RS02965 f86e6d4d0f5e0f8f96a34d37013927ad 552 TIGRFAM TIGR01110 mdcA: malonate decarboxylase, alpha subunit 10 552 1.1E-301 T 23-04-2016 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 RR42_RS02965 f86e6d4d0f5e0f8f96a34d37013927ad 552 SUPERFAMILY SSF100950 47 281 1.6E-33 T 23-04-2016 RR42_RS02965 f86e6d4d0f5e0f8f96a34d37013927ad 552 PANTHER PTHR13707 82 274 9.7E-87 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RR42_RS09070 9eb6bb5a579198ac4b3bd3ca8571f1f0 541 Pfam PF01256 Carbohydrate kinase 277 513 9.6E-51 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 RR42_RS09070 9eb6bb5a579198ac4b3bd3ca8571f1f0 541 Gene3D G3DSA:3.40.1190.20 264 534 4.4E-78 T 23-04-2016 IPR029056 Ribokinase-like RR42_RS09070 9eb6bb5a579198ac4b3bd3ca8571f1f0 541 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 45 239 4.0E-26 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RR42_RS09070 9eb6bb5a579198ac4b3bd3ca8571f1f0 541 Gene3D G3DSA:3.40.50.10260 31 263 6.4E-57 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RR42_RS09070 9eb6bb5a579198ac4b3bd3ca8571f1f0 541 PIRSF PIRSF017184 32 540 3.0E-107 T 23-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 RR42_RS09070 9eb6bb5a579198ac4b3bd3ca8571f1f0 541 PANTHER PTHR12592:SF0 22 541 1.5E-111 T 23-04-2016 RR42_RS09070 9eb6bb5a579198ac4b3bd3ca8571f1f0 541 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 471 481 - T 23-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site RR42_RS09070 9eb6bb5a579198ac4b3bd3ca8571f1f0 541 Pfam PF03853 YjeF-related protein N-terminus 54 219 1.1E-35 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RR42_RS09070 9eb6bb5a579198ac4b3bd3ca8571f1f0 541 PANTHER PTHR12592 22 541 1.5E-111 T 23-04-2016 RR42_RS09070 9eb6bb5a579198ac4b3bd3ca8571f1f0 541 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 253 537 22.897 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 RR42_RS09070 9eb6bb5a579198ac4b3bd3ca8571f1f0 541 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 33 240 20.382 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RR42_RS09070 9eb6bb5a579198ac4b3bd3ca8571f1f0 541 SUPERFAMILY SSF64153 32 274 1.7E-50 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RR42_RS09070 9eb6bb5a579198ac4b3bd3ca8571f1f0 541 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 259 525 1.0E-55 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 RR42_RS09070 9eb6bb5a579198ac4b3bd3ca8571f1f0 541 SUPERFAMILY SSF53613 254 531 1.71E-63 T 23-04-2016 IPR029056 Ribokinase-like RR42_RS15940 50668fd52dd77d11799bd947e2652ab3 754 Gene3D G3DSA:3.90.100.10 631 754 9.8E-34 T 23-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RR42_RS15940 50668fd52dd77d11799bd947e2652ab3 754 PANTHER PTHR11751:SF406 526 534 1.3E-141 T 23-04-2016 RR42_RS15940 50668fd52dd77d11799bd947e2652ab3 754 PANTHER PTHR11751:SF406 554 674 1.3E-141 T 23-04-2016 RR42_RS15940 50668fd52dd77d11799bd947e2652ab3 754 PANTHER PTHR11751:SF406 152 498 1.3E-141 T 23-04-2016 RR42_RS15940 50668fd52dd77d11799bd947e2652ab3 754 Gene3D G3DSA:3.40.640.10 151 456 3.8E-113 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS15940 50668fd52dd77d11799bd947e2652ab3 754 SUPERFAMILY SSF53383 151 607 4.87E-118 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS15940 50668fd52dd77d11799bd947e2652ab3 754 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 20 145 1.0E-38 T 23-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 RR42_RS15940 50668fd52dd77d11799bd947e2652ab3 754 PIRSF PIRSF009393 1 754 1.6E-287 T 23-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 RR42_RS15940 50668fd52dd77d11799bd947e2652ab3 754 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 392 406 - T 23-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 RR42_RS15940 50668fd52dd77d11799bd947e2652ab3 754 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 151 587 2.4E-155 T 23-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 RR42_RS15940 50668fd52dd77d11799bd947e2652ab3 754 PANTHER PTHR11751 526 534 1.3E-141 T 23-04-2016 RR42_RS15940 50668fd52dd77d11799bd947e2652ab3 754 PANTHER PTHR11751 554 674 1.3E-141 T 23-04-2016 RR42_RS15940 50668fd52dd77d11799bd947e2652ab3 754 PANTHER PTHR11751 152 498 1.3E-141 T 23-04-2016 RR42_RS15940 50668fd52dd77d11799bd947e2652ab3 754 Gene3D G3DSA:3.90.1150.10 459 630 1.2E-68 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS15940 50668fd52dd77d11799bd947e2652ab3 754 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 614 739 2.5E-46 T 23-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RR42_RS15940 50668fd52dd77d11799bd947e2652ab3 754 SUPERFAMILY SSF55904 609 752 3.01E-43 T 23-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RR42_RS09440 ddbde0f79a57cb001493901702567bb0 329 Pfam PF03595 Voltage-dependent anion channel 20 318 1.3E-53 T 23-04-2016 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 RR42_RS09440 ddbde0f79a57cb001493901702567bb0 329 PANTHER PTHR37955 10 327 1.2E-32 T 23-04-2016 RR42_RS09440 ddbde0f79a57cb001493901702567bb0 329 PANTHER PTHR37955:SF1 10 327 1.2E-32 T 23-04-2016 RR42_RS03890 4b7bb69cea7124201eefdcc85df71af7 244 PANTHER PTHR30462:SF1 68 244 1.2E-56 T 23-04-2016 RR42_RS03890 4b7bb69cea7124201eefdcc85df71af7 244 Pfam PF04403 Paraquat-inducible protein A 83 239 4.4E-52 T 23-04-2016 IPR007498 Paraquat-inducible protein A RR42_RS03890 4b7bb69cea7124201eefdcc85df71af7 244 PANTHER PTHR30462 68 244 1.2E-56 T 23-04-2016 RR42_RS00895 108c1507849bb5a65270b838c232451a 376 SUPERFAMILY SSF47203 225 375 1.93E-58 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS00895 108c1507849bb5a65270b838c232451a 376 SUPERFAMILY SSF56645 2 240 1.22E-85 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RR42_RS00895 108c1507849bb5a65270b838c232451a 376 PANTHER PTHR10909:SF305 1 376 6.4E-176 T 23-04-2016 RR42_RS00895 108c1507849bb5a65270b838c232451a 376 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 2.4E-51 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS00895 108c1507849bb5a65270b838c232451a 376 Gene3D G3DSA:2.40.110.10 119 216 1.7E-41 T 23-04-2016 RR42_RS00895 108c1507849bb5a65270b838c232451a 376 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 116 7.5E-39 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS00895 108c1507849bb5a65270b838c232451a 376 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 215 1.8E-25 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RR42_RS00895 108c1507849bb5a65270b838c232451a 376 Gene3D G3DSA:1.10.540.10 3 117 7.1E-44 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS00895 108c1507849bb5a65270b838c232451a 376 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RR42_RS00895 108c1507849bb5a65270b838c232451a 376 PANTHER PTHR10909 1 376 6.4E-176 T 23-04-2016 RR42_RS00895 108c1507849bb5a65270b838c232451a 376 Gene3D G3DSA:1.20.140.10 217 375 1.5E-73 T 23-04-2016 RR42_RS11025 1f8b42578296aa2bb206df6a6025ca5b 236 Gene3D G3DSA:3.40.50.1860 114 216 1.6E-34 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS11025 1f8b42578296aa2bb206df6a6025ca5b 236 PANTHER PTHR21198:SF7 1 228 6.1E-81 T 23-04-2016 RR42_RS11025 1f8b42578296aa2bb206df6a6025ca5b 236 SUPERFAMILY SSF53681 118 229 2.01E-33 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS11025 1f8b42578296aa2bb206df6a6025ca5b 236 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 231 3.6E-71 T 23-04-2016 IPR004380 Aspartate racemase GO:0006520|GO:0016855 RR42_RS11025 1f8b42578296aa2bb206df6a6025ca5b 236 SUPERFAMILY SSF53681 1 116 5.89E-33 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS11025 1f8b42578296aa2bb206df6a6025ca5b 236 PANTHER PTHR21198 1 228 6.1E-81 T 23-04-2016 RR42_RS11025 1f8b42578296aa2bb206df6a6025ca5b 236 Gene3D G3DSA:3.40.50.1860 1 113 5.6E-41 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS11025 1f8b42578296aa2bb206df6a6025ca5b 236 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 2.5E-58 T 23-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS37560 d85600358f417208403849d51719acb7 297 Pfam PF14257 Domain of unknown function (DUF4349) 22 272 6.8E-41 T 23-04-2016 IPR025645 Domain of unknown function DUF4349 RR42_RS13215 11cecf9e2857c0502d3d63ddf0818557 232 SMART SM00448 1 112 3.1E-41 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS13215 11cecf9e2857c0502d3d63ddf0818557 232 PANTHER PTHR26402:SF316 1 220 6.4E-80 T 23-04-2016 RR42_RS13215 11cecf9e2857c0502d3d63ddf0818557 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 218 1.1E-16 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS13215 11cecf9e2857c0502d3d63ddf0818557 232 SMART SM00862 145 218 2.5E-18 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS13215 11cecf9e2857c0502d3d63ddf0818557 232 Pfam PF00072 Response regulator receiver domain 3 112 2.8E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS13215 11cecf9e2857c0502d3d63ddf0818557 232 Gene3D G3DSA:3.40.50.2300 1 119 7.2E-40 T 23-04-2016 RR42_RS13215 11cecf9e2857c0502d3d63ddf0818557 232 PANTHER PTHR26402 1 220 6.4E-80 T 23-04-2016 RR42_RS13215 11cecf9e2857c0502d3d63ddf0818557 232 Gene3D G3DSA:1.10.10.10 123 219 5.7E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS13215 11cecf9e2857c0502d3d63ddf0818557 232 SUPERFAMILY SSF52172 1 172 1.1E-40 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS01775 feb941d354716cd29cc1559ea31558fa 431 Pfam PF08886 Glutamate-cysteine ligase 17 422 5.4E-200 T 23-04-2016 IPR011718 Glutamate--cysteine ligase GshA RR42_RS01775 feb941d354716cd29cc1559ea31558fa 431 TIGRFAM TIGR02049 gshA_ferroox: glutamate--cysteine ligase 17 425 1.3E-207 T 23-04-2016 IPR011718 Glutamate--cysteine ligase GshA RR42_RS06395 495c77fda21258bb4e755219e46a9169 198 SUPERFAMILY SSF46689 2 71 1.13E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS06395 495c77fda21258bb4e755219e46a9169 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 12 42 - T 23-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RR42_RS06395 495c77fda21258bb4e755219e46a9169 198 Gene3D G3DSA:1.10.357.10 2 185 5.3E-23 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS06395 495c77fda21258bb4e755219e46a9169 198 PANTHER PTHR30055 4 190 7.5E-21 T 23-04-2016 RR42_RS06395 495c77fda21258bb4e755219e46a9169 198 PANTHER PTHR30055:SF11 4 190 7.5E-21 T 23-04-2016 RR42_RS06395 495c77fda21258bb4e755219e46a9169 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 3 45 9.4E-12 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS12360 2235877ef82eddb4fb2bf58c12c6f074 330 PIRSF PIRSF017082 1 330 1.1E-75 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS12360 2235877ef82eddb4fb2bf58c12c6f074 330 PANTHER PTHR30349 5 297 4.3E-76 T 23-04-2016 RR42_RS12360 2235877ef82eddb4fb2bf58c12c6f074 330 SUPERFAMILY SSF53850 120 290 2.61E-15 T 23-04-2016 RR42_RS12360 2235877ef82eddb4fb2bf58c12c6f074 330 PANTHER PTHR30349:SF1 5 297 4.3E-76 T 23-04-2016 RR42_RS12360 2235877ef82eddb4fb2bf58c12c6f074 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 56 325 1.8E-78 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS24300 051d50c597a81d633165d8d31496b736 395 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 84 96 - T 23-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 RR42_RS24300 051d50c597a81d633165d8d31496b736 395 SUPERFAMILY SSF52540 325 394 4.54E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS24300 051d50c597a81d633165d8d31496b736 395 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 1 124 6.2E-8 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RR42_RS24300 051d50c597a81d633165d8d31496b736 395 PANTHER PTHR11638:SF122 1 395 3.2E-212 T 23-04-2016 RR42_RS24300 051d50c597a81d633165d8d31496b736 395 Gene3D G3DSA:1.10.8.60 135 217 2.6E-29 T 23-04-2016 RR42_RS24300 051d50c597a81d633165d8d31496b736 395 PANTHER PTHR11638 1 395 3.2E-212 T 23-04-2016 RR42_RS24300 051d50c597a81d633165d8d31496b736 395 Gene3D G3DSA:3.40.50.300 1 131 1.5E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS24300 051d50c597a81d633165d8d31496b736 395 Gene3D G3DSA:3.40.50.300 331 394 5.0E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS24300 051d50c597a81d633165d8d31496b736 395 SUPERFAMILY SSF52540 1 271 6.01E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04050 64f60fafb5be60c603f955209b9fa9ca 240 Gene3D G3DSA:2.60.120.10 19 142 3.5E-27 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS04050 64f60fafb5be60c603f955209b9fa9ca 240 SMART SM00100 9 131 3.5E-8 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain RR42_RS04050 64f60fafb5be60c603f955209b9fa9ca 240 Pfam PF00027 Cyclic nucleotide-binding domain 31 118 2.2E-19 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain RR42_RS04050 64f60fafb5be60c603f955209b9fa9ca 240 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 199 214 9.8E-5 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RR42_RS04050 64f60fafb5be60c603f955209b9fa9ca 240 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 183 199 9.8E-5 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RR42_RS04050 64f60fafb5be60c603f955209b9fa9ca 240 SUPERFAMILY SSF46785 152 234 1.31E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS04050 64f60fafb5be60c603f955209b9fa9ca 240 PANTHER PTHR24567:SF36 19 235 9.7E-48 T 23-04-2016 RR42_RS04050 64f60fafb5be60c603f955209b9fa9ca 240 Pfam PF13545 Crp-like helix-turn-helix domain 152 232 2.4E-15 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RR42_RS04050 64f60fafb5be60c603f955209b9fa9ca 240 SMART SM00419 177 225 5.5E-10 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RR42_RS04050 64f60fafb5be60c603f955209b9fa9ca 240 PANTHER PTHR24567 19 235 9.7E-48 T 23-04-2016 RR42_RS04050 64f60fafb5be60c603f955209b9fa9ca 240 SUPERFAMILY SSF51206 16 144 7.59E-30 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like RR42_RS04050 64f60fafb5be60c603f955209b9fa9ca 240 Gene3D G3DSA:1.10.10.10 152 234 5.6E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS00480 897cfd0f05b4525d3a2d2721adb91345 606 Pfam PF03814 Potassium-transporting ATPase A subunit 11 596 1.7E-243 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RR42_RS00480 897cfd0f05b4525d3a2d2721adb91345 606 PIRSF PIRSF001294 1 600 4.9E-239 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RR42_RS00480 897cfd0f05b4525d3a2d2721adb91345 606 PANTHER PTHR30607 245 602 4.5E-294 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RR42_RS00480 897cfd0f05b4525d3a2d2721adb91345 606 PANTHER PTHR30607 1 215 4.5E-294 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RR42_RS00480 897cfd0f05b4525d3a2d2721adb91345 606 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 598 35.637 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RR42_RS00480 897cfd0f05b4525d3a2d2721adb91345 606 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 235 597 1.2E-161 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RR42_RS16475 b36315546de2e1fd8f9028ab6f91728b 682 SMART SM00889 462 580 1.4E-62 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RR42_RS16475 b36315546de2e1fd8f9028ab6f91728b 682 SUPERFAMILY SSF50447 244 374 8.35E-24 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RR42_RS16475 b36315546de2e1fd8f9028ab6f91728b 682 Gene3D G3DSA:3.30.70.240 582 666 9.2E-22 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain RR42_RS16475 b36315546de2e1fd8f9028ab6f91728b 682 Gene3D G3DSA:3.30.230.10 466 581 1.1E-47 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RR42_RS16475 b36315546de2e1fd8f9028ab6f91728b 682 SUPERFAMILY SSF54980 385 462 5.04E-17 T 23-04-2016 IPR009022 Elongation factor G, III-V domain RR42_RS16475 b36315546de2e1fd8f9028ab6f91728b 682 Gene3D G3DSA:3.30.70.870 386 462 1.1E-20 T 23-04-2016 RR42_RS16475 b36315546de2e1fd8f9028ab6f91728b 682 Gene3D G3DSA:2.40.30.10 288 375 3.3E-20 T 23-04-2016 RR42_RS16475 b36315546de2e1fd8f9028ab6f91728b 682 SUPERFAMILY SSF54211 461 581 1.29E-42 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RR42_RS16475 b36315546de2e1fd8f9028ab6f91728b 682 Gene3D G3DSA:3.40.50.300 4 264 6.3E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS16475 b36315546de2e1fd8f9028ab6f91728b 682 SUPERFAMILY SSF54980 585 675 3.96E-20 T 23-04-2016 IPR009022 Elongation factor G, III-V domain RR42_RS16475 b36315546de2e1fd8f9028ab6f91728b 682 Pfam PF14492 Elongation Factor G, domain II 386 458 8.6E-19 T 23-04-2016 IPR009022 Elongation factor G, III-V domain RR42_RS16475 b36315546de2e1fd8f9028ab6f91728b 682 SMART SM00838 582 670 3.0E-23 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain RR42_RS16475 b36315546de2e1fd8f9028ab6f91728b 682 PANTHER PTHR23115 283 673 9.1E-194 T 23-04-2016 RR42_RS16475 b36315546de2e1fd8f9028ab6f91728b 682 PANTHER PTHR23115 1 172 9.1E-194 T 23-04-2016 RR42_RS16475 b36315546de2e1fd8f9028ab6f91728b 682 PANTHER PTHR23115 233 261 9.1E-194 T 23-04-2016 RR42_RS16475 b36315546de2e1fd8f9028ab6f91728b 682 Pfam PF00679 Elongation factor G C-terminus 583 668 1.5E-23 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain RR42_RS16475 b36315546de2e1fd8f9028ab6f91728b 682 Pfam PF00009 Elongation factor Tu GTP binding domain 8 259 7.2E-30 T 23-04-2016 RR42_RS16475 b36315546de2e1fd8f9028ab6f91728b 682 SUPERFAMILY SSF52540 3 260 3.96E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS16475 b36315546de2e1fd8f9028ab6f91728b 682 PANTHER PTHR23115:SF98 283 673 9.1E-194 T 23-04-2016 RR42_RS16475 b36315546de2e1fd8f9028ab6f91728b 682 PANTHER PTHR23115:SF98 1 172 9.1E-194 T 23-04-2016 RR42_RS16475 b36315546de2e1fd8f9028ab6f91728b 682 PANTHER PTHR23115:SF98 233 261 9.1E-194 T 23-04-2016 RR42_RS16475 b36315546de2e1fd8f9028ab6f91728b 682 Pfam PF03764 Elongation factor G, domain IV 461 579 3.6E-42 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RR42_RS07530 1acae45a06a85de83ecbb1915a714d26 393 Gene3D G3DSA:3.40.50.2300 157 307 1.7E-27 T 23-04-2016 RR42_RS07530 1acae45a06a85de83ecbb1915a714d26 393 Gene3D G3DSA:3.40.50.2300 29 156 5.0E-45 T 23-04-2016 RR42_RS07530 1acae45a06a85de83ecbb1915a714d26 393 Gene3D G3DSA:3.40.50.2300 308 361 5.0E-45 T 23-04-2016 RR42_RS07530 1acae45a06a85de83ecbb1915a714d26 393 PANTHER PTHR30483:SF13 14 376 6.7E-86 T 23-04-2016 RR42_RS07530 1acae45a06a85de83ecbb1915a714d26 393 PANTHER PTHR30483 14 376 6.7E-86 T 23-04-2016 RR42_RS07530 1acae45a06a85de83ecbb1915a714d26 393 SUPERFAMILY SSF53822 34 378 5.01E-88 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RR42_RS07530 1acae45a06a85de83ecbb1915a714d26 393 Pfam PF13458 Periplasmic binding protein 33 371 2.7E-72 T 23-04-2016 IPR028081 Leucine-binding protein domain RR42_RS16200 0705666b7df3499541338ceeeca26321 270 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 141 153 - T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RR42_RS16200 0705666b7df3499541338ceeeca26321 270 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 262 20.2 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RR42_RS16200 0705666b7df3499541338ceeeca26321 270 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 262 1.3E-82 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RR42_RS16200 0705666b7df3499541338ceeeca26321 270 PANTHER PTHR30589:SF0 1 260 5.2E-106 T 23-04-2016 RR42_RS16200 0705666b7df3499541338ceeeca26321 270 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 257 5.8E-84 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RR42_RS16200 0705666b7df3499541338ceeeca26321 270 PANTHER PTHR30589 1 260 5.2E-106 T 23-04-2016 RR42_RS14170 f83721ef5bb1125b706d48e5b6a36cd7 199 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 196 27.233 T 23-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 RR42_RS14170 f83721ef5bb1125b706d48e5b6a36cd7 199 Pfam PF12804 MobA-like NTP transferase domain 9 164 5.4E-32 T 23-04-2016 IPR025877 MobA-like NTP transferase RR42_RS14170 f83721ef5bb1125b706d48e5b6a36cd7 199 PANTHER PTHR19136 1 199 1.3E-35 T 23-04-2016 RR42_RS14170 f83721ef5bb1125b706d48e5b6a36cd7 199 PANTHER PTHR19136:SF81 1 199 1.3E-35 T 23-04-2016 RR42_RS14170 f83721ef5bb1125b706d48e5b6a36cd7 199 SUPERFAMILY SSF53448 7 193 1.6E-31 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RR42_RS14170 f83721ef5bb1125b706d48e5b6a36cd7 199 Gene3D G3DSA:3.90.550.10 4 198 7.8E-52 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RR42_RS14170 f83721ef5bb1125b706d48e5b6a36cd7 199 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 7 193 1.9E-65 T 23-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 RR42_RS20550 96b17281162204e67cfcb31fa1d9964e 419 PANTHER PTHR30469 27 402 7.1E-101 T 23-04-2016 RR42_RS20550 96b17281162204e67cfcb31fa1d9964e 419 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 65 391 3.4E-70 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RR42_RS20550 96b17281162204e67cfcb31fa1d9964e 419 Gene3D G3DSA:2.40.50.100 198 232 2.3E-15 T 23-04-2016 RR42_RS20550 96b17281162204e67cfcb31fa1d9964e 419 Gene3D G3DSA:2.40.50.100 90 123 2.3E-15 T 23-04-2016 RR42_RS20550 96b17281162204e67cfcb31fa1d9964e 419 SUPERFAMILY SSF111369 79 313 1.24E-57 T 23-04-2016 RR42_RS20550 96b17281162204e67cfcb31fa1d9964e 419 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 85 311 1.7E-17 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RR42_RS20550 96b17281162204e67cfcb31fa1d9964e 419 PANTHER PTHR30469:SF0 27 402 7.1E-101 T 23-04-2016 RR42_RS15560 ec2ab5278eda67bf6d335fcfee14499e 209 PANTHER PTHR21098 1 203 4.4E-83 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RR42_RS15560 ec2ab5278eda67bf6d335fcfee14499e 209 PIRSF PIRSF000498 1 209 6.6E-66 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RR42_RS15560 ec2ab5278eda67bf6d335fcfee14499e 209 SUPERFAMILY SSF63380 98 204 7.4E-32 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RR42_RS15560 ec2ab5278eda67bf6d335fcfee14499e 209 SUPERFAMILY SSF63380 1 94 7.14E-17 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RR42_RS15560 ec2ab5278eda67bf6d335fcfee14499e 209 Pfam PF00677 Lumazine binding domain 3 92 2.6E-13 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RR42_RS15560 ec2ab5278eda67bf6d335fcfee14499e 209 Pfam PF00677 Lumazine binding domain 105 193 1.1E-21 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RR42_RS15560 ec2ab5278eda67bf6d335fcfee14499e 209 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 205 1.7E-51 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RR42_RS15560 ec2ab5278eda67bf6d335fcfee14499e 209 Gene3D G3DSA:2.40.30.20 5 109 1.5E-22 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RR42_RS15560 ec2ab5278eda67bf6d335fcfee14499e 209 Gene3D G3DSA:2.40.30.20 110 203 5.2E-31 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RR42_RS01225 8e7c70906b93cbf858ca2f1d0d1939c8 229 SUPERFAMILY SSF53271 14 207 4.84E-43 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS01225 8e7c70906b93cbf858ca2f1d0d1939c8 229 Pfam PF00156 Phosphoribosyl transferase domain 49 168 2.8E-14 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RR42_RS01225 8e7c70906b93cbf858ca2f1d0d1939c8 229 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 21 201 2.0E-56 T 23-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 RR42_RS01225 8e7c70906b93cbf858ca2f1d0d1939c8 229 Gene3D G3DSA:3.40.50.2020 17 228 5.3E-74 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS01225 8e7c70906b93cbf858ca2f1d0d1939c8 229 PANTHER PTHR19278 18 229 6.4E-94 T 23-04-2016 RR42_RS01225 8e7c70906b93cbf858ca2f1d0d1939c8 229 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 229 32.273 T 23-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 RR42_RS01225 8e7c70906b93cbf858ca2f1d0d1939c8 229 PANTHER PTHR19278:SF36 18 229 6.4E-94 T 23-04-2016 RR42_RS05785 97a35e38fdffff0e41574e039c1b3c71 380 PANTHER PTHR12756:SF18 1 311 1.3E-96 T 23-04-2016 RR42_RS05785 97a35e38fdffff0e41574e039c1b3c71 380 Gene3D G3DSA:3.40.630.10 101 366 1.9E-42 T 23-04-2016 RR42_RS05785 97a35e38fdffff0e41574e039c1b3c71 380 SMART SM00631 113 352 8.5E-4 T 23-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 RR42_RS05785 97a35e38fdffff0e41574e039c1b3c71 380 SUPERFAMILY SSF53187 105 376 2.18E-55 T 23-04-2016 RR42_RS05785 97a35e38fdffff0e41574e039c1b3c71 380 Pfam PF00246 Zinc carboxypeptidase 131 348 1.3E-19 T 23-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 RR42_RS05785 97a35e38fdffff0e41574e039c1b3c71 380 PANTHER PTHR12756 1 311 1.3E-96 T 23-04-2016 RR42_RS12995 cb9ea075596de0a9a309fee8b80e7c29 471 SUPERFAMILY SSF54368 5 102 2.09E-37 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RR42_RS12995 cb9ea075596de0a9a309fee8b80e7c29 471 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 470 9.3E-202 T 23-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RR42_RS12995 cb9ea075596de0a9a309fee8b80e7c29 471 PANTHER PTHR20852 4 140 8.3E-258 T 23-04-2016 RR42_RS12995 cb9ea075596de0a9a309fee8b80e7c29 471 PANTHER PTHR20852 163 471 8.3E-258 T 23-04-2016 RR42_RS12995 cb9ea075596de0a9a309fee8b80e7c29 471 Gene3D G3DSA:3.10.20.70 5 107 9.2E-42 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RR42_RS12995 cb9ea075596de0a9a309fee8b80e7c29 471 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 97 6.1E-31 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RR42_RS12995 cb9ea075596de0a9a309fee8b80e7c29 471 SMART SM01230 104 381 3.7E-145 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RR42_RS12995 cb9ea075596de0a9a309fee8b80e7c29 471 PANTHER PTHR20852:SF15 4 140 8.3E-258 T 23-04-2016 RR42_RS12995 cb9ea075596de0a9a309fee8b80e7c29 471 PANTHER PTHR20852:SF15 163 471 8.3E-258 T 23-04-2016 RR42_RS12995 cb9ea075596de0a9a309fee8b80e7c29 471 SUPERFAMILY SSF55931 104 470 3.92E-137 T 23-04-2016 RR42_RS12995 cb9ea075596de0a9a309fee8b80e7c29 471 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 261 276 - T 23-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RR42_RS12995 cb9ea075596de0a9a309fee8b80e7c29 471 Gene3D G3DSA:3.30.590.10 108 458 9.4E-139 T 23-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 RR42_RS12995 cb9ea075596de0a9a309fee8b80e7c29 471 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 23-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RR42_RS12995 cb9ea075596de0a9a309fee8b80e7c29 471 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 388 400 - T 23-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RR42_RS12995 cb9ea075596de0a9a309fee8b80e7c29 471 Pfam PF00120 Glutamine synthetase, catalytic domain 105 468 2.0E-136 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RR42_RS17635 ba289d0a307e1ea4ced9c78ee5862171 320 SUPERFAMILY SSF144083 254 317 7.19E-21 T 23-04-2016 RR42_RS17635 ba289d0a307e1ea4ced9c78ee5862171 320 Gene3D G3DSA:3.30.460.20 2 130 1.9E-5 T 23-04-2016 RR42_RS17635 ba289d0a307e1ea4ced9c78ee5862171 320 PANTHER PTHR21535:SF37 1 319 4.4E-100 T 23-04-2016 RR42_RS17635 ba289d0a307e1ea4ced9c78ee5862171 320 PANTHER PTHR21535 1 319 4.4E-100 T 23-04-2016 RR42_RS17635 ba289d0a307e1ea4ced9c78ee5862171 320 Pfam PF01544 CorA-like Mg2+ transporter protein 29 315 3.2E-59 T 23-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 RR42_RS17635 ba289d0a307e1ea4ced9c78ee5862171 320 Gene3D G3DSA:1.20.58.340 243 319 1.9E-28 T 23-04-2016 RR42_RS17635 ba289d0a307e1ea4ced9c78ee5862171 320 SUPERFAMILY SSF143865 1 258 2.62E-39 T 23-04-2016 RR42_RS17635 ba289d0a307e1ea4ced9c78ee5862171 320 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 2 319 3.3E-76 T 23-04-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 RR42_RS11060 6157a3c0882ff5c916fd1fb7c0c8b172 452 Pfam PF00144 Beta-lactamase 137 420 1.1E-38 T 23-04-2016 IPR001466 Beta-lactamase-related RR42_RS11060 6157a3c0882ff5c916fd1fb7c0c8b172 452 PANTHER PTHR22935:SF2 122 444 1.3E-115 T 23-04-2016 RR42_RS11060 6157a3c0882ff5c916fd1fb7c0c8b172 452 Gene3D G3DSA:3.40.710.10 137 419 1.6E-50 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS11060 6157a3c0882ff5c916fd1fb7c0c8b172 452 PANTHER PTHR22935 122 444 1.3E-115 T 23-04-2016 RR42_RS11060 6157a3c0882ff5c916fd1fb7c0c8b172 452 SUPERFAMILY SSF56601 53 440 2.49E-96 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS10190 6012a69596d1c543c0c410b41f26c1a4 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS10190 6012a69596d1c543c0c410b41f26c1a4 214 PANTHER PTHR26402 4 213 2.9E-70 T 23-04-2016 RR42_RS10190 6012a69596d1c543c0c410b41f26c1a4 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 1.4E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS10190 6012a69596d1c543c0c410b41f26c1a4 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 1.4E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS10190 6012a69596d1c543c0c410b41f26c1a4 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 1.4E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS10190 6012a69596d1c543c0c410b41f26c1a4 214 Pfam PF00072 Response regulator receiver domain 6 117 8.9E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS10190 6012a69596d1c543c0c410b41f26c1a4 214 SUPERFAMILY SSF46894 143 213 9.86E-21 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS10190 6012a69596d1c543c0c410b41f26c1a4 214 SMART SM00421 151 208 1.5E-20 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS10190 6012a69596d1c543c0c410b41f26c1a4 214 Gene3D G3DSA:3.40.50.2300 3 122 2.7E-33 T 23-04-2016 RR42_RS10190 6012a69596d1c543c0c410b41f26c1a4 214 Gene3D G3DSA:1.10.10.10 123 213 6.9E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS10190 6012a69596d1c543c0c410b41f26c1a4 214 SUPERFAMILY SSF52172 4 133 1.27E-31 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS10190 6012a69596d1c543c0c410b41f26c1a4 214 PANTHER PTHR26402:SF588 4 213 2.9E-70 T 23-04-2016 RR42_RS10190 6012a69596d1c543c0c410b41f26c1a4 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 2.3E-20 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS10190 6012a69596d1c543c0c410b41f26c1a4 214 SMART SM00448 4 117 1.8E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS19440 1c607e5d2394fad76f730e6c72c9bfa8 264 Pfam PF12395 Protein of unknown function 149 253 2.0E-28 T 23-04-2016 IPR022123 Protein of unknown function DUF3658 RR42_RS19440 1c607e5d2394fad76f730e6c72c9bfa8 264 Pfam PF08874 Domain of unknown function (DUF1835) 4 119 1.1E-26 T 23-04-2016 IPR014973 Protein of unknown function DUF1835 RR42_RS02475 c184079f92d26cd1f750d9b597275dd1 262 SUPERFAMILY SSF56219 1 242 7.07E-48 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RR42_RS02475 c184079f92d26cd1f750d9b597275dd1 262 PANTHER PTHR15822 1 248 3.4E-53 T 23-04-2016 RR42_RS02475 c184079f92d26cd1f750d9b597275dd1 262 Gene3D G3DSA:3.60.10.10 3 176 3.7E-18 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RR42_RS02475 c184079f92d26cd1f750d9b597275dd1 262 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 235 1.5E-17 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RR42_RS02475 c184079f92d26cd1f750d9b597275dd1 262 PANTHER PTHR15822:SF7 1 248 3.4E-53 T 23-04-2016 RR42_RS04770 e8c69849946b80d53c1337759f8bd53c 128 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 5 122 5.0E-51 T 23-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 RR42_RS04770 e8c69849946b80d53c1337759f8bd53c 128 PANTHER PTHR30492 5 128 2.0E-56 T 23-04-2016 RR42_RS04770 e8c69849946b80d53c1337759f8bd53c 128 Pfam PF02142 MGS-like domain 18 110 7.1E-15 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain RR42_RS04770 e8c69849946b80d53c1337759f8bd53c 128 ProSitePatterns PS01335 Methylglyoxal synthase active site. 57 65 - T 23-04-2016 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 RR42_RS04770 e8c69849946b80d53c1337759f8bd53c 128 SUPERFAMILY SSF52335 4 124 1.83E-49 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain RR42_RS04770 e8c69849946b80d53c1337759f8bd53c 128 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 4 123 32.545 T 23-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 RR42_RS04770 e8c69849946b80d53c1337759f8bd53c 128 PIRSF PIRSF006614 1 127 3.2E-54 T 23-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 RR42_RS04770 e8c69849946b80d53c1337759f8bd53c 128 Gene3D G3DSA:3.40.50.1380 5 124 4.4E-56 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain RR42_RS04770 e8c69849946b80d53c1337759f8bd53c 128 SMART SM00851 17 110 1.1E-22 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain RR42_RS20655 181e5ff015887f65c9ba22ac69b75350 491 SUPERFAMILY SSF56954 2 30 5.89E-110 T 23-04-2016 RR42_RS20655 181e5ff015887f65c9ba22ac69b75350 491 SUPERFAMILY SSF56954 60 474 5.89E-110 T 23-04-2016 RR42_RS20655 181e5ff015887f65c9ba22ac69b75350 491 Gene3D G3DSA:1.20.1600.10 59 475 5.7E-118 T 23-04-2016 RR42_RS20655 181e5ff015887f65c9ba22ac69b75350 491 Pfam PF02321 Outer membrane efflux protein 290 470 1.1E-22 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RR42_RS20655 181e5ff015887f65c9ba22ac69b75350 491 Pfam PF02321 Outer membrane efflux protein 72 259 7.7E-28 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RR42_RS20655 181e5ff015887f65c9ba22ac69b75350 491 PANTHER PTHR30203 8 475 5.5E-151 T 23-04-2016 RR42_RS20655 181e5ff015887f65c9ba22ac69b75350 491 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 472 4.7E-120 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RR42_RS20655 181e5ff015887f65c9ba22ac69b75350 491 PANTHER PTHR30203:SF15 8 475 5.5E-151 T 23-04-2016 RR42_RS00745 cd9b4b6bb8aeaaa97c4ceed88cbd0700 278 PANTHER PTHR30136 12 274 5.2E-91 T 23-04-2016 RR42_RS00745 cd9b4b6bb8aeaaa97c4ceed88cbd0700 278 Pfam PF01614 Bacterial transcriptional regulator 134 260 7.9E-10 T 23-04-2016 IPR014757 Transcription regulator IclR, C-terminal RR42_RS00745 cd9b4b6bb8aeaaa97c4ceed88cbd0700 278 Pfam PF09339 IclR helix-turn-helix domain 17 68 1.2E-13 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RR42_RS00745 cd9b4b6bb8aeaaa97c4ceed88cbd0700 278 PANTHER PTHR30136:SF8 12 274 5.2E-91 T 23-04-2016 RR42_RS00745 cd9b4b6bb8aeaaa97c4ceed88cbd0700 278 SUPERFAMILY SSF55781 81 264 1.31E-37 T 23-04-2016 IPR029016 GAF domain-like RR42_RS00745 cd9b4b6bb8aeaaa97c4ceed88cbd0700 278 SMART SM00346 15 105 4.5E-21 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RR42_RS00745 cd9b4b6bb8aeaaa97c4ceed88cbd0700 278 Gene3D G3DSA:3.30.450.40 85 265 2.7E-45 T 23-04-2016 IPR029016 GAF domain-like RR42_RS00745 cd9b4b6bb8aeaaa97c4ceed88cbd0700 278 Gene3D G3DSA:1.10.10.10 10 84 2.4E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS00745 cd9b4b6bb8aeaaa97c4ceed88cbd0700 278 SUPERFAMILY SSF46785 15 88 1.24E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS02460 1173c001a9ba8a22bd230c731112d04d 298 Gene3D G3DSA:1.10.10.10 8 83 1.6E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS02460 1173c001a9ba8a22bd230c731112d04d 298 Pfam PF03466 LysR substrate binding domain 105 296 3.1E-21 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS02460 1173c001a9ba8a22bd230c731112d04d 298 PANTHER PTHR30126:SF16 8 296 3.1E-78 T 23-04-2016 RR42_RS02460 1173c001a9ba8a22bd230c731112d04d 298 PANTHER PTHR30126 8 296 3.1E-78 T 23-04-2016 RR42_RS02460 1173c001a9ba8a22bd230c731112d04d 298 Gene3D G3DSA:3.40.190.10 105 196 6.8E-11 T 23-04-2016 RR42_RS02460 1173c001a9ba8a22bd230c731112d04d 298 SUPERFAMILY SSF46785 8 91 2.14E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS02460 1173c001a9ba8a22bd230c731112d04d 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 1.0E-15 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS02460 1173c001a9ba8a22bd230c731112d04d 298 SUPERFAMILY SSF53850 105 296 6.64E-23 T 23-04-2016 RR42_RS12955 ac6fecf6b0e2a39fd351ebf3b027d2bf 367 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS12955 ac6fecf6b0e2a39fd351ebf3b027d2bf 367 SMART SM00382 29 212 7.4E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS12955 ac6fecf6b0e2a39fd351ebf3b027d2bf 367 Gene3D G3DSA:2.40.50.140 292 348 5.0E-17 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS12955 ac6fecf6b0e2a39fd351ebf3b027d2bf 367 Gene3D G3DSA:3.40.50.300 4 235 1.4E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12955 ac6fecf6b0e2a39fd351ebf3b027d2bf 367 PANTHER PTHR24220 5 267 4.5E-162 T 23-04-2016 RR42_RS12955 ac6fecf6b0e2a39fd351ebf3b027d2bf 367 PANTHER PTHR24220 287 295 4.5E-162 T 23-04-2016 RR42_RS12955 ac6fecf6b0e2a39fd351ebf3b027d2bf 367 Pfam PF08402 TOBE domain 287 357 8.5E-7 T 23-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 RR42_RS12955 ac6fecf6b0e2a39fd351ebf3b027d2bf 367 SUPERFAMILY SSF52540 4 245 1.98E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12955 ac6fecf6b0e2a39fd351ebf3b027d2bf 367 SUPERFAMILY SSF50331 237 365 4.37E-27 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RR42_RS12955 ac6fecf6b0e2a39fd351ebf3b027d2bf 367 Pfam PF00005 ABC transporter 21 162 3.1E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS12955 ac6fecf6b0e2a39fd351ebf3b027d2bf 367 Gene3D G3DSA:2.40.50.100 283 291 2.6E-4 T 23-04-2016 RR42_RS12955 ac6fecf6b0e2a39fd351ebf3b027d2bf 367 Gene3D G3DSA:2.40.50.100 351 365 2.6E-4 T 23-04-2016 RR42_RS12955 ac6fecf6b0e2a39fd351ebf3b027d2bf 367 PANTHER PTHR24220:SF151 5 267 4.5E-162 T 23-04-2016 RR42_RS12955 ac6fecf6b0e2a39fd351ebf3b027d2bf 367 PANTHER PTHR24220:SF151 287 295 4.5E-162 T 23-04-2016 RR42_RS09445 87bdfefd92e8d128825bf96c2777ee32 295 SUPERFAMILY SSF53850 84 289 3.26E-41 T 23-04-2016 RR42_RS09445 87bdfefd92e8d128825bf96c2777ee32 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 57 3.5E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS09445 87bdfefd92e8d128825bf96c2777ee32 295 PANTHER PTHR30537:SF5 1 281 5.2E-97 T 23-04-2016 RR42_RS09445 87bdfefd92e8d128825bf96c2777ee32 295 PANTHER PTHR30537 1 281 5.2E-97 T 23-04-2016 RR42_RS09445 87bdfefd92e8d128825bf96c2777ee32 295 Gene3D G3DSA:3.40.190.10 86 171 1.9E-21 T 23-04-2016 RR42_RS09445 87bdfefd92e8d128825bf96c2777ee32 295 Gene3D G3DSA:3.40.190.10 172 251 6.5E-5 T 23-04-2016 RR42_RS09445 87bdfefd92e8d128825bf96c2777ee32 295 Pfam PF03466 LysR substrate binding domain 83 285 7.6E-38 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS09445 87bdfefd92e8d128825bf96c2777ee32 295 Gene3D G3DSA:1.10.10.10 2 78 3.5E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS09445 87bdfefd92e8d128825bf96c2777ee32 295 SUPERFAMILY SSF46785 2 106 7.95E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS04375 179640669e8729322077b5672e1884b6 437 Pfam PF01595 Domain of unknown function DUF21 6 194 1.2E-40 T 23-04-2016 IPR002550 Domain of unknown function DUF21 RR42_RS04375 179640669e8729322077b5672e1884b6 437 Gene3D G3DSA:3.10.580.10 198 343 1.7E-17 T 23-04-2016 RR42_RS04375 179640669e8729322077b5672e1884b6 437 SUPERFAMILY SSF54631 197 340 5.98E-23 T 23-04-2016 RR42_RS04375 179640669e8729322077b5672e1884b6 437 Pfam PF03471 Transporter associated domain 351 429 9.4E-20 T 23-04-2016 IPR005170 Transporter-associated domain RR42_RS04375 179640669e8729322077b5672e1884b6 437 SMART SM00116 219 268 23.0 T 23-04-2016 IPR000644 CBS domain RR42_RS04375 179640669e8729322077b5672e1884b6 437 SMART SM00116 289 337 0.053 T 23-04-2016 IPR000644 CBS domain RR42_RS04375 179640669e8729322077b5672e1884b6 437 Pfam PF00571 CBS domain 288 337 9.9E-6 T 23-04-2016 IPR000644 CBS domain RR42_RS04375 179640669e8729322077b5672e1884b6 437 PANTHER PTHR22777 4 437 6.2E-162 T 23-04-2016 RR42_RS04375 179640669e8729322077b5672e1884b6 437 PANTHER PTHR22777:SF16 4 437 6.2E-162 T 23-04-2016 RR42_RS04375 179640669e8729322077b5672e1884b6 437 Gene3D G3DSA:3.30.465.10 344 429 1.1E-24 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RR42_RS04375 179640669e8729322077b5672e1884b6 437 SMART SM01091 350 430 1.6E-26 T 23-04-2016 IPR005170 Transporter-associated domain RR42_RS04375 179640669e8729322077b5672e1884b6 437 SUPERFAMILY SSF56176 348 433 2.56E-20 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RR42_RS19610 9f675325744e9d554871d660def859d4 446 ProSitePatterns PS00217 Sugar transport proteins signature 2. 139 164 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RR42_RS19610 9f675325744e9d554871d660def859d4 446 SUPERFAMILY SSF103473 25 442 2.09E-73 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS19610 9f675325744e9d554871d660def859d4 446 Pfam PF07690 Major Facilitator Superfamily 42 390 3.0E-33 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS19610 9f675325744e9d554871d660def859d4 446 Gene3D G3DSA:1.20.1250.20 26 233 4.1E-29 T 23-04-2016 RR42_RS19610 9f675325744e9d554871d660def859d4 446 Gene3D G3DSA:1.20.1250.20 256 442 1.8E-25 T 23-04-2016 RR42_RS19610 9f675325744e9d554871d660def859d4 446 PANTHER PTHR23508:SF11 25 437 2.4E-154 T 23-04-2016 RR42_RS19610 9f675325744e9d554871d660def859d4 446 ProSitePatterns PS00216 Sugar transport proteins signature 1. 312 329 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RR42_RS19610 9f675325744e9d554871d660def859d4 446 PANTHER PTHR23508 25 437 2.4E-154 T 23-04-2016 RR42_RS19610 9f675325744e9d554871d660def859d4 446 ProSitePatterns PS00216 Sugar transport proteins signature 1. 89 105 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RR42_RS10995 1b097ba4aee2ad135309ebf4fd2b927b 328 PANTHER PTHR30349:SF16 12 281 1.9E-84 T 23-04-2016 RR42_RS10995 1b097ba4aee2ad135309ebf4fd2b927b 328 PIRSF PIRSF017082 1 327 1.2E-82 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS10995 1b097ba4aee2ad135309ebf4fd2b927b 328 PANTHER PTHR30349 12 281 1.9E-84 T 23-04-2016 RR42_RS10995 1b097ba4aee2ad135309ebf4fd2b927b 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 55 324 5.4E-115 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS10995 1b097ba4aee2ad135309ebf4fd2b927b 328 SUPERFAMILY SSF53850 113 296 1.47E-13 T 23-04-2016 RR42_RS06370 ca8882767ea2b159687a01bebdb7ea5f 416 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 23-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RR42_RS06370 ca8882767ea2b159687a01bebdb7ea5f 416 SUPERFAMILY SSF55021 257 336 1.19E-17 T 23-04-2016 RR42_RS06370 ca8882767ea2b159687a01bebdb7ea5f 416 Gene3D G3DSA:3.40.1160.10 1 254 4.1E-76 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RR42_RS06370 ca8882767ea2b159687a01bebdb7ea5f 416 Pfam PF01842 ACT domain 276 332 1.0E-9 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RR42_RS06370 ca8882767ea2b159687a01bebdb7ea5f 416 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 413 1.3E-126 T 23-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RR42_RS06370 ca8882767ea2b159687a01bebdb7ea5f 416 SUPERFAMILY SSF53633 4 250 3.67E-75 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RR42_RS06370 ca8882767ea2b159687a01bebdb7ea5f 416 PANTHER PTHR21499 1 415 3.4E-162 T 23-04-2016 RR42_RS06370 ca8882767ea2b159687a01bebdb7ea5f 416 Pfam PF13840 ACT domain 348 409 1.6E-17 T 23-04-2016 IPR027795 GATS-like ACT domain RR42_RS06370 ca8882767ea2b159687a01bebdb7ea5f 416 PANTHER PTHR21499:SF27 1 415 3.4E-162 T 23-04-2016 RR42_RS06370 ca8882767ea2b159687a01bebdb7ea5f 416 Pfam PF00696 Amino acid kinase family 3 229 4.5E-51 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RR42_RS06370 ca8882767ea2b159687a01bebdb7ea5f 416 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 412 1.4E-112 T 23-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RR42_RS06370 ca8882767ea2b159687a01bebdb7ea5f 416 PIRSF PIRSF000726 54 416 1.5E-139 T 23-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RR42_RS06370 ca8882767ea2b159687a01bebdb7ea5f 416 SUPERFAMILY SSF55021 341 414 7.5E-25 T 23-04-2016 RR42_RS00675 7dd624f218e5e610a4cfac3c27b38335 243 SUPERFAMILY SSF159594 78 240 6.28E-29 T 23-04-2016 RR42_RS00675 7dd624f218e5e610a4cfac3c27b38335 243 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 79 233 6.7E-11 T 23-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component RR42_RS00675 7dd624f218e5e610a4cfac3c27b38335 243 Gene3D G3DSA:3.40.50.10610 69 239 1.1E-37 T 23-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component RR42_RS37630 680ba5e2901269ac7e3b0069c8cb0b36 406 Gene3D G3DSA:3.90.1340.10 206 283 2.9E-5 T 23-04-2016 IPR011083 Phage tail collar domain RR42_RS37630 680ba5e2901269ac7e3b0069c8cb0b36 406 SUPERFAMILY SSF88874 358 404 1.7E-16 T 23-04-2016 RR42_RS37630 680ba5e2901269ac7e3b0069c8cb0b36 406 SUPERFAMILY SSF88874 205 331 1.7E-16 T 23-04-2016 RR42_RS16135 91073e0ac8441869d104f945de3f96e3 335 Pfam PF01032 FecCD transport family 19 332 7.2E-81 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 RR42_RS16135 91073e0ac8441869d104f945de3f96e3 335 PANTHER PTHR30472 4 335 1.2E-81 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 RR42_RS16135 91073e0ac8441869d104f945de3f96e3 335 Gene3D G3DSA:1.10.3470.10 4 334 8.3E-94 T 23-04-2016 IPR029022 ABC transporter, BtuC-like RR42_RS16135 91073e0ac8441869d104f945de3f96e3 335 SUPERFAMILY SSF81345 4 333 2.09E-71 T 23-04-2016 IPR029022 ABC transporter, BtuC-like RR42_RS09720 7a45af0b632bee1cdd5d041d4f865d0c 989 SUPERFAMILY SSF55874 559 734 4.71E-45 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS09720 7a45af0b632bee1cdd5d041d4f865d0c 989 PANTHER PTHR24423 374 916 1.2E-142 T 23-04-2016 RR42_RS09720 7a45af0b632bee1cdd5d041d4f865d0c 989 PANTHER PTHR24423 2 18 1.2E-142 T 23-04-2016 RR42_RS09720 7a45af0b632bee1cdd5d041d4f865d0c 989 SUPERFAMILY SSF47384 491 571 7.26E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS09720 7a45af0b632bee1cdd5d041d4f865d0c 989 SUPERFAMILY SSF47226 863 982 1.7E-10 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RR42_RS09720 7a45af0b632bee1cdd5d041d4f865d0c 989 SMART SM00388 505 570 5.7E-22 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS09720 7a45af0b632bee1cdd5d041d4f865d0c 989 Pfam PF00072 Response regulator receiver domain 768 873 8.6E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS09720 7a45af0b632bee1cdd5d041d4f865d0c 989 SMART SM00387 617 732 2.5E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS09720 7a45af0b632bee1cdd5d041d4f865d0c 989 Gene3D G3DSA:1.10.287.130 498 566 1.0E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS09720 7a45af0b632bee1cdd5d041d4f865d0c 989 Pfam PF00512 His Kinase A (phospho-acceptor) domain 505 570 1.9E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS09720 7a45af0b632bee1cdd5d041d4f865d0c 989 PRINTS PR00344 Bacterial sensor protein C-terminal signature 692 710 1.7E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS09720 7a45af0b632bee1cdd5d041d4f865d0c 989 PRINTS PR00344 Bacterial sensor protein C-terminal signature 716 729 1.7E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS09720 7a45af0b632bee1cdd5d041d4f865d0c 989 PRINTS PR00344 Bacterial sensor protein C-terminal signature 657 671 1.7E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS09720 7a45af0b632bee1cdd5d041d4f865d0c 989 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 617 731 2.3E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS09720 7a45af0b632bee1cdd5d041d4f865d0c 989 SMART SM00448 766 877 3.4E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS09720 7a45af0b632bee1cdd5d041d4f865d0c 989 PANTHER PTHR24423:SF382 374 916 1.2E-142 T 23-04-2016 RR42_RS09720 7a45af0b632bee1cdd5d041d4f865d0c 989 PANTHER PTHR24423:SF382 2 18 1.2E-142 T 23-04-2016 RR42_RS09720 7a45af0b632bee1cdd5d041d4f865d0c 989 Gene3D G3DSA:3.40.50.2300 764 889 1.2E-35 T 23-04-2016 RR42_RS09720 7a45af0b632bee1cdd5d041d4f865d0c 989 Pfam PF01627 Hpt domain 908 983 1.8E-5 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RR42_RS09720 7a45af0b632bee1cdd5d041d4f865d0c 989 Gene3D G3DSA:1.20.120.160 900 988 3.0E-10 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RR42_RS09720 7a45af0b632bee1cdd5d041d4f865d0c 989 SUPERFAMILY SSF52172 765 886 5.27E-34 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS09720 7a45af0b632bee1cdd5d041d4f865d0c 989 Gene3D G3DSA:3.30.565.10 571 737 4.8E-46 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS13490 b4886de9cebdcee669dc6ff6153f8db9 221 SUPERFAMILY SSF53335 2 217 4.42E-35 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS13490 b4886de9cebdcee669dc6ff6153f8db9 221 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 8 217 30.951 T 23-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 RR42_RS13490 b4886de9cebdcee669dc6ff6153f8db9 221 Pfam PF01728 FtsJ-like methyltransferase 28 214 2.5E-50 T 23-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 RR42_RS13490 b4886de9cebdcee669dc6ff6153f8db9 221 PANTHER PTHR10920 1 215 1.0E-88 T 23-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 RR42_RS13490 b4886de9cebdcee669dc6ff6153f8db9 221 Gene3D G3DSA:3.40.50.150 3 218 1.4E-69 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS13490 b4886de9cebdcee669dc6ff6153f8db9 221 PIRSF PIRSF005461 1 220 1.3E-68 T 23-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 RR42_RS13490 b4886de9cebdcee669dc6ff6153f8db9 221 PANTHER PTHR10920:SF20 1 215 1.0E-88 T 23-04-2016 RR42_RS10440 30edee99d355bcb8dd319d20cff5fb7e 135 SUPERFAMILY SSF49764 26 134 7.32E-27 T 23-04-2016 IPR008978 HSP20-like chaperone RR42_RS10440 30edee99d355bcb8dd319d20cff5fb7e 135 Pfam PF00011 Hsp20/alpha crystallin family 34 132 1.3E-16 T 23-04-2016 IPR002068 Alpha crystallin/Hsp20 domain RR42_RS10440 30edee99d355bcb8dd319d20cff5fb7e 135 Gene3D G3DSA:2.60.40.790 19 134 3.5E-24 T 23-04-2016 IPR008978 HSP20-like chaperone RR42_RS10440 30edee99d355bcb8dd319d20cff5fb7e 135 PANTHER PTHR11527:SF118 1 135 1.2E-20 T 23-04-2016 RR42_RS10440 30edee99d355bcb8dd319d20cff5fb7e 135 PANTHER PTHR11527 1 135 1.2E-20 T 23-04-2016 IPR031107 Small heat shock protein HSP20 RR42_RS00755 8b19bf1ac3d3b4a12e85362148e77727 280 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 20 268 9.6E-80 T 23-04-2016 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185|UniPathway: UPA00157 RR42_RS00755 8b19bf1ac3d3b4a12e85362148e77727 280 Pfam PF00561 alpha/beta hydrolase fold 30 255 1.7E-27 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS00755 8b19bf1ac3d3b4a12e85362148e77727 280 PANTHER PTHR10992:SF771 9 270 1.4E-51 T 23-04-2016 RR42_RS00755 8b19bf1ac3d3b4a12e85362148e77727 280 PANTHER PTHR10992 9 270 1.4E-51 T 23-04-2016 RR42_RS00755 8b19bf1ac3d3b4a12e85362148e77727 280 SUPERFAMILY SSF53474 5 269 2.6E-64 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS00755 8b19bf1ac3d3b4a12e85362148e77727 280 Gene3D G3DSA:3.40.50.1820 9 269 6.0E-67 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS00755 8b19bf1ac3d3b4a12e85362148e77727 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 214 228 4.0E-11 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS00755 8b19bf1ac3d3b4a12e85362148e77727 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 113 126 4.0E-11 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS00755 8b19bf1ac3d3b4a12e85362148e77727 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 55 70 4.0E-11 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS00755 8b19bf1ac3d3b4a12e85362148e77727 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 4.0E-11 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS17645 960c631897ad8dd552e08a65402b6089 298 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 130 213 2.9E-7 T 23-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RR42_RS17645 960c631897ad8dd552e08a65402b6089 298 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 19 100 5.2E-23 T 23-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 RR42_RS17645 960c631897ad8dd552e08a65402b6089 298 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 17 292 1.7E-74 T 23-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 RR42_RS17645 960c631897ad8dd552e08a65402b6089 298 SUPERFAMILY SSF51735 114 292 1.61E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS17645 960c631897ad8dd552e08a65402b6089 298 Gene3D G3DSA:3.40.50.720 119 293 2.1E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS17645 960c631897ad8dd552e08a65402b6089 298 PANTHER PTHR21089 15 298 2.1E-137 T 23-04-2016 RR42_RS17645 960c631897ad8dd552e08a65402b6089 298 Gene3D G3DSA:3.40.192.10 11 118 3.8E-36 T 23-04-2016 RR42_RS17645 960c631897ad8dd552e08a65402b6089 298 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 14 291 30.042 T 23-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 RR42_RS17645 960c631897ad8dd552e08a65402b6089 298 SUPERFAMILY SSF53223 11 113 4.55E-31 T 23-04-2016 RR42_RS17645 960c631897ad8dd552e08a65402b6089 298 PANTHER PTHR21089:SF2 15 298 2.1E-137 T 23-04-2016 RR42_RS02485 ad21e18e923d6ae9c4e6e4d2273058e6 199 Gene3D G3DSA:3.40.50.720 1 197 7.1E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS02485 ad21e18e923d6ae9c4e6e4d2273058e6 199 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 162 4.0E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS02485 ad21e18e923d6ae9c4e6e4d2273058e6 199 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 4.0E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS02485 ad21e18e923d6ae9c4e6e4d2273058e6 199 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 99 115 4.0E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS02485 ad21e18e923d6ae9c4e6e4d2273058e6 199 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 54 65 4.0E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS02485 ad21e18e923d6ae9c4e6e4d2273058e6 199 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 144 4.0E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS02485 ad21e18e923d6ae9c4e6e4d2273058e6 199 PANTHER PTHR24322 125 155 3.2E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS02485 ad21e18e923d6ae9c4e6e4d2273058e6 199 PANTHER PTHR24322 5 109 3.2E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS02485 ad21e18e923d6ae9c4e6e4d2273058e6 199 SUPERFAMILY SSF51735 1 196 3.32E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS02485 ad21e18e923d6ae9c4e6e4d2273058e6 199 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 32 159 3.6E-14 T 23-04-2016 RR42_RS02485 ad21e18e923d6ae9c4e6e4d2273058e6 199 PANTHER PTHR24322:SF57 125 155 3.2E-13 T 23-04-2016 RR42_RS02485 ad21e18e923d6ae9c4e6e4d2273058e6 199 PANTHER PTHR24322:SF57 5 109 3.2E-13 T 23-04-2016 RR42_RS00665 a38a623dcfa38f9cecdd64520ddb7b85 224 PIRSF PIRSF015592 1 222 1.4E-81 T 23-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RR42_RS00665 a38a623dcfa38f9cecdd64520ddb7b85 224 Gene3D G3DSA:3.40.630.20 2 222 5.4E-67 T 23-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like RR42_RS00665 a38a623dcfa38f9cecdd64520ddb7b85 224 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 137 151 - T 23-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RR42_RS00665 a38a623dcfa38f9cecdd64520ddb7b85 224 PANTHER PTHR23402 1 223 1.2E-65 T 23-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like RR42_RS00665 a38a623dcfa38f9cecdd64520ddb7b85 224 Pfam PF01470 Pyroglutamyl peptidase 3 210 8.6E-76 T 23-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like RR42_RS00665 a38a623dcfa38f9cecdd64520ddb7b85 224 PANTHER PTHR23402:SF1 1 223 1.2E-65 T 23-04-2016 RR42_RS00665 a38a623dcfa38f9cecdd64520ddb7b85 224 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 210 40.036 T 23-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 RR42_RS00665 a38a623dcfa38f9cecdd64520ddb7b85 224 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 4 223 1.4E-87 T 23-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 RR42_RS00665 a38a623dcfa38f9cecdd64520ddb7b85 224 SUPERFAMILY SSF53182 1 224 1.07E-69 T 23-04-2016 RR42_RS00665 a38a623dcfa38f9cecdd64520ddb7b85 224 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 139 155 2.6E-18 T 23-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RR42_RS00665 a38a623dcfa38f9cecdd64520ddb7b85 224 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 2.6E-18 T 23-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RR42_RS04295 b92ee64a30b96cf34f06059669b40f65 419 PANTHER PTHR31384 82 352 2.9E-56 T 23-04-2016 RR42_RS04295 b92ee64a30b96cf34f06059669b40f65 419 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 43 417 3.5E-155 T 23-04-2016 IPR007434 Peptidogalycan biosysnthesis/recognition RR42_RS04295 b92ee64a30b96cf34f06059669b40f65 419 Gene3D G3DSA:3.40.630.30 215 368 5.4E-27 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS04295 b92ee64a30b96cf34f06059669b40f65 419 SUPERFAMILY SSF55729 224 398 7.47E-38 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS12940 5e5f6755421ee66d65270acf5881049d 951 Gene3D G3DSA:3.40.50.970 600 803 2.5E-22 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS12940 5e5f6755421ee66d65270acf5881049d 951 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 9 46 1.3E-18 T 23-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RR42_RS12940 5e5f6755421ee66d65270acf5881049d 951 SUPERFAMILY SSF52518 581 802 3.31E-50 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS12940 5e5f6755421ee66d65270acf5881049d 951 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 800 941 4.5E-55 T 23-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RR42_RS12940 5e5f6755421ee66d65270acf5881049d 951 Gene3D G3DSA:3.40.50.970 164 521 7.3E-70 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS12940 5e5f6755421ee66d65270acf5881049d 951 SMART SM00861 598 795 2.2E-61 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RR42_RS12940 5e5f6755421ee66d65270acf5881049d 951 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 11 940 0.0 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RR42_RS12940 5e5f6755421ee66d65270acf5881049d 951 PIRSF PIRSF000157 1 943 0.0 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RR42_RS12940 5e5f6755421ee66d65270acf5881049d 951 Pfam PF00676 Dehydrogenase E1 component 216 520 2.4E-46 T 23-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 RR42_RS12940 5e5f6755421ee66d65270acf5881049d 951 Pfam PF02779 Transketolase, pyrimidine binding domain 597 795 5.4E-65 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RR42_RS12940 5e5f6755421ee66d65270acf5881049d 951 PANTHER PTHR23152:SF4 1 950 0.0 T 23-04-2016 RR42_RS12940 5e5f6755421ee66d65270acf5881049d 951 PANTHER PTHR23152 1 950 0.0 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RR42_RS12940 5e5f6755421ee66d65270acf5881049d 951 SUPERFAMILY SSF52518 123 550 1.05E-88 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS02355 8833493cdff7a647b3db16dde187e805 298 PANTHER PTHR22908:SF67 5 291 1.2E-81 T 23-04-2016 RR42_RS02355 8833493cdff7a647b3db16dde187e805 298 SMART SM00382 34 235 1.2E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS02355 8833493cdff7a647b3db16dde187e805 298 Gene3D G3DSA:3.40.50.300 31 214 3.7E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02355 8833493cdff7a647b3db16dde187e805 298 Pfam PF07728 AAA domain (dynein-related subfamily) 38 192 3.0E-11 T 23-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 RR42_RS02355 8833493cdff7a647b3db16dde187e805 298 SUPERFAMILY SSF52540 36 282 3.42E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02355 8833493cdff7a647b3db16dde187e805 298 PANTHER PTHR22908 5 291 1.2E-81 T 23-04-2016 RR42_RS01680 e0ded16cdea21204f6c1193e622a937b 402 SUPERFAMILY SSF69189 294 386 2.16E-22 T 23-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 RR42_RS01680 e0ded16cdea21204f6c1193e622a937b 402 Gene3D G3DSA:3.40.710.10 27 292 3.2E-93 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS01680 e0ded16cdea21204f6c1193e622a937b 402 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 42 272 6.8E-74 T 23-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 RR42_RS01680 e0ded16cdea21204f6c1193e622a937b 402 PANTHER PTHR21581:SF3 37 401 5.6E-97 T 23-04-2016 RR42_RS01680 e0ded16cdea21204f6c1193e622a937b 402 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 72 83 3.8E-18 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RR42_RS01680 e0ded16cdea21204f6c1193e622a937b 402 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 154 167 3.8E-18 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RR42_RS01680 e0ded16cdea21204f6c1193e622a937b 402 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 127 144 3.8E-18 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RR42_RS01680 e0ded16cdea21204f6c1193e622a937b 402 PANTHER PTHR21581 37 401 5.6E-97 T 23-04-2016 RR42_RS01680 e0ded16cdea21204f6c1193e622a937b 402 SUPERFAMILY SSF56601 22 294 6.18E-76 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS01680 e0ded16cdea21204f6c1193e622a937b 402 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 294 384 4.0E-20 T 23-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 RR42_RS01680 e0ded16cdea21204f6c1193e622a937b 402 Gene3D G3DSA:2.60.410.10 294 384 1.1E-25 T 23-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 RR42_RS01680 e0ded16cdea21204f6c1193e622a937b 402 SMART SM00936 294 384 1.1E-29 T 23-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 RR42_RS09060 240cd07cf492f0477c514a2d346caaea 544 SUPERFAMILY SSF53697 2 539 4.17E-203 T 23-04-2016 RR42_RS09060 240cd07cf492f0477c514a2d346caaea 544 Gene3D G3DSA:3.40.50.10490 5 95 2.8E-125 T 23-04-2016 RR42_RS09060 240cd07cf492f0477c514a2d346caaea 544 Gene3D G3DSA:3.40.50.10490 291 497 2.8E-125 T 23-04-2016 RR42_RS09060 240cd07cf492f0477c514a2d346caaea 544 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 263 276 - T 23-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS09060 240cd07cf492f0477c514a2d346caaea 544 PANTHER PTHR11469 1 542 9.4E-283 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS09060 240cd07cf492f0477c514a2d346caaea 544 Pfam PF00342 Phosphoglucose isomerase 49 534 2.2E-211 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS09060 240cd07cf492f0477c514a2d346caaea 544 Gene3D G3DSA:3.40.50.10490 96 289 7.0E-83 T 23-04-2016 RR42_RS09060 240cd07cf492f0477c514a2d346caaea 544 PRINTS PR00662 Glucose-6-phosphate isomerase signature 259 277 5.7E-54 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS09060 240cd07cf492f0477c514a2d346caaea 544 PRINTS PR00662 Glucose-6-phosphate isomerase signature 488 501 5.7E-54 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS09060 240cd07cf492f0477c514a2d346caaea 544 PRINTS PR00662 Glucose-6-phosphate isomerase signature 474 488 5.7E-54 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS09060 240cd07cf492f0477c514a2d346caaea 544 PRINTS PR00662 Glucose-6-phosphate isomerase signature 456 474 5.7E-54 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS09060 240cd07cf492f0477c514a2d346caaea 544 PRINTS PR00662 Glucose-6-phosphate isomerase signature 336 357 5.7E-54 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS09060 240cd07cf492f0477c514a2d346caaea 544 PRINTS PR00662 Glucose-6-phosphate isomerase signature 147 166 5.7E-54 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS09060 240cd07cf492f0477c514a2d346caaea 544 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 43 515 40.27 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS09060 240cd07cf492f0477c514a2d346caaea 544 Gene3D G3DSA:1.10.1390.10 498 539 6.0E-17 T 23-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS09060 240cd07cf492f0477c514a2d346caaea 544 PANTHER PTHR11469:SF4 1 542 9.4E-283 T 23-04-2016 RR42_RS09060 240cd07cf492f0477c514a2d346caaea 544 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 488 505 - T 23-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS12980 e61fd46430d069dabe22cae540fcfcb5 514 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RR42_RS12980 e61fd46430d069dabe22cae540fcfcb5 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RR42_RS12980 e61fd46430d069dabe22cae540fcfcb5 514 SUPERFAMILY SSF52540 135 378 5.72E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12980 e61fd46430d069dabe22cae540fcfcb5 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RR42_RS12980 e61fd46430d069dabe22cae540fcfcb5 514 Pfam PF00072 Response regulator receiver domain 4 113 1.7E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS12980 e61fd46430d069dabe22cae540fcfcb5 514 SMART SM00448 2 113 1.6E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS12980 e61fd46430d069dabe22cae540fcfcb5 514 Gene3D G3DSA:3.40.50.300 134 308 2.0E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12980 e61fd46430d069dabe22cae540fcfcb5 514 PANTHER PTHR32071:SF15 428 514 5.4E-214 T 23-04-2016 RR42_RS12980 e61fd46430d069dabe22cae540fcfcb5 514 PANTHER PTHR32071:SF15 1 387 5.4E-214 T 23-04-2016 RR42_RS12980 e61fd46430d069dabe22cae540fcfcb5 514 Gene3D G3DSA:1.10.10.60 347 381 2.4E-37 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS12980 e61fd46430d069dabe22cae540fcfcb5 514 Gene3D G3DSA:1.10.10.60 459 513 2.4E-37 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS12980 e61fd46430d069dabe22cae540fcfcb5 514 SUPERFAMILY SSF46689 440 513 2.51E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS12980 e61fd46430d069dabe22cae540fcfcb5 514 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 494 514 3.3E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS12980 e61fd46430d069dabe22cae540fcfcb5 514 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 477 494 3.3E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS12980 e61fd46430d069dabe22cae540fcfcb5 514 SUPERFAMILY SSF52172 2 181 1.04E-39 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS12980 e61fd46430d069dabe22cae540fcfcb5 514 Pfam PF02954 Bacterial regulatory protein, Fis family 472 511 8.5E-11 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS12980 e61fd46430d069dabe22cae540fcfcb5 514 Gene3D G3DSA:3.40.50.2300 4 129 1.3E-32 T 23-04-2016 RR42_RS12980 e61fd46430d069dabe22cae540fcfcb5 514 Pfam PF00158 Sigma-54 interaction domain 136 302 3.9E-69 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RR42_RS12980 e61fd46430d069dabe22cae540fcfcb5 514 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 4 384 1.1E-191 T 23-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 RR42_RS12980 e61fd46430d069dabe22cae540fcfcb5 514 SMART SM00382 156 303 6.0E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS12980 e61fd46430d069dabe22cae540fcfcb5 514 PANTHER PTHR32071 428 514 5.4E-214 T 23-04-2016 RR42_RS12980 e61fd46430d069dabe22cae540fcfcb5 514 PANTHER PTHR32071 1 387 5.4E-214 T 23-04-2016 RR42_RS12805 b9e90c5c14421c513a2b4bb4d44761d6 298 Pfam PF04116 Fatty acid hydroxylase superfamily 87 221 7.4E-30 T 23-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 RR42_RS12805 b9e90c5c14421c513a2b4bb4d44761d6 298 PANTHER PTHR21624 13 273 5.3E-80 T 23-04-2016 RR42_RS05750 88bb353b983d01c29bf8d0a3a9bb031b 244 PANTHER PTHR23029 4 211 5.6E-29 T 23-04-2016 RR42_RS05750 88bb353b983d01c29bf8d0a3a9bb031b 244 SMART SM00855 10 169 1.3E-13 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RR42_RS05750 88bb353b983d01c29bf8d0a3a9bb031b 244 Gene3D G3DSA:3.40.50.1240 8 213 1.3E-33 T 23-04-2016 IPR029033 Histidine phosphatase superfamily RR42_RS05750 88bb353b983d01c29bf8d0a3a9bb031b 244 SUPERFAMILY SSF53254 9 212 7.33E-38 T 23-04-2016 IPR029033 Histidine phosphatase superfamily RR42_RS05750 88bb353b983d01c29bf8d0a3a9bb031b 244 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 11 201 1.4E-34 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RR42_RS10250 54851ddf92e6c8f53d4f83638e6252da 262 PANTHER PTHR11941:SF82 17 259 2.8E-64 T 23-04-2016 RR42_RS10250 54851ddf92e6c8f53d4f83638e6252da 262 SUPERFAMILY SSF52096 8 262 1.49E-57 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS10250 54851ddf92e6c8f53d4f83638e6252da 262 Gene3D G3DSA:3.90.226.10 5 256 1.2E-53 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS10250 54851ddf92e6c8f53d4f83638e6252da 262 PANTHER PTHR11941 17 259 2.8E-64 T 23-04-2016 RR42_RS10250 54851ddf92e6c8f53d4f83638e6252da 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 261 4.3E-38 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RR42_RS04100 91086519ddf372f2a16a284a6ec96ffe 453 Gene3D G3DSA:3.40.50.300 196 412 3.3E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04100 91086519ddf372f2a16a284a6ec96ffe 453 PANTHER PTHR30258:SF3 23 438 7.6E-131 T 23-04-2016 RR42_RS04100 91086519ddf372f2a16a284a6ec96ffe 453 SUPERFAMILY SSF52540 80 414 6.21E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04100 91086519ddf372f2a16a284a6ec96ffe 453 PANTHER PTHR30258 23 438 7.6E-131 T 23-04-2016 RR42_RS04100 91086519ddf372f2a16a284a6ec96ffe 453 Pfam PF00437 Type II/IV secretion system protein 100 375 3.3E-85 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RR42_RS04100 91086519ddf372f2a16a284a6ec96ffe 453 Gene3D G3DSA:3.30.450.90 95 193 3.0E-35 T 23-04-2016 RR42_RS16375 3b39f6062b7387da52f786b97ee5a068 257 SUPERFAMILY SSF51735 5 256 1.38E-78 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS16375 3b39f6062b7387da52f786b97ee5a068 257 Gene3D G3DSA:3.40.50.720 1 255 9.8E-80 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS16375 3b39f6062b7387da52f786b97ee5a068 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 254 1.4E-66 T 23-04-2016 RR42_RS16375 3b39f6062b7387da52f786b97ee5a068 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RR42_RS16375 3b39f6062b7387da52f786b97ee5a068 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 2.1E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16375 3b39f6062b7387da52f786b97ee5a068 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 2.1E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16375 3b39f6062b7387da52f786b97ee5a068 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 2.1E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16375 3b39f6062b7387da52f786b97ee5a068 257 PANTHER PTHR24321 2 256 5.2E-53 T 23-04-2016 RR42_RS16375 3b39f6062b7387da52f786b97ee5a068 257 PANTHER PTHR24321:SF6 2 256 5.2E-53 T 23-04-2016 RR42_RS16375 3b39f6062b7387da52f786b97ee5a068 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.4E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16375 3b39f6062b7387da52f786b97ee5a068 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 1.4E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16375 3b39f6062b7387da52f786b97ee5a068 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 1.4E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16375 3b39f6062b7387da52f786b97ee5a068 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 1.4E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16375 3b39f6062b7387da52f786b97ee5a068 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.4E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16375 3b39f6062b7387da52f786b97ee5a068 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.4E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS05735 f7615eddf226e74f6047a88ac89d2dd1 504 SMART SM00327 124 300 9.3E-28 T 23-04-2016 IPR002035 von Willebrand factor, type A RR42_RS05735 f7615eddf226e74f6047a88ac89d2dd1 504 Pfam PF00092 von Willebrand factor type A domain 126 288 1.4E-21 T 23-04-2016 IPR002035 von Willebrand factor, type A RR42_RS05735 f7615eddf226e74f6047a88ac89d2dd1 504 Pfam PF12034 Domain of unknown function (DUF3520) 302 486 7.7E-67 T 23-04-2016 IPR021908 Protein of unknown function DUF3520 RR42_RS05735 f7615eddf226e74f6047a88ac89d2dd1 504 Pfam PF12450 von Willebrand factor 18 109 8.9E-39 T 23-04-2016 IPR022156 Uncharacterised protein YfbK, N-terminal RR42_RS05735 f7615eddf226e74f6047a88ac89d2dd1 504 PANTHER PTHR10166:SF15 104 387 3.0E-109 T 23-04-2016 RR42_RS05735 f7615eddf226e74f6047a88ac89d2dd1 504 PANTHER PTHR10166 104 387 3.0E-109 T 23-04-2016 RR42_RS05735 f7615eddf226e74f6047a88ac89d2dd1 504 SUPERFAMILY SSF53300 123 291 1.05E-35 T 23-04-2016 IPR002035 von Willebrand factor, type A RR42_RS05735 f7615eddf226e74f6047a88ac89d2dd1 504 Gene3D G3DSA:3.40.50.410 124 296 1.4E-23 T 23-04-2016 IPR002035 von Willebrand factor, type A RR42_RS07840 471ac5e0aabecfa1da8a5b1299044d44 401 PANTHER PTHR11014 19 401 2.0E-129 T 23-04-2016 RR42_RS07840 471ac5e0aabecfa1da8a5b1299044d44 401 Gene3D G3DSA:3.40.630.10 340 398 1.4E-61 T 23-04-2016 RR42_RS07840 471ac5e0aabecfa1da8a5b1299044d44 401 Gene3D G3DSA:3.40.630.10 15 199 1.4E-61 T 23-04-2016 RR42_RS07840 471ac5e0aabecfa1da8a5b1299044d44 401 Pfam PF01546 Peptidase family M20/M25/M40 84 396 8.3E-37 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RR42_RS07840 471ac5e0aabecfa1da8a5b1299044d44 401 SUPERFAMILY SSF53187 14 190 6.56E-57 T 23-04-2016 RR42_RS07840 471ac5e0aabecfa1da8a5b1299044d44 401 SUPERFAMILY SSF53187 317 397 6.56E-57 T 23-04-2016 RR42_RS07840 471ac5e0aabecfa1da8a5b1299044d44 401 Pfam PF07687 Peptidase dimerisation domain 187 297 3.3E-24 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS07840 471ac5e0aabecfa1da8a5b1299044d44 401 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 23 395 1.8E-114 T 23-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 RR42_RS07840 471ac5e0aabecfa1da8a5b1299044d44 401 PANTHER PTHR11014:SF80 19 401 2.0E-129 T 23-04-2016 RR42_RS07840 471ac5e0aabecfa1da8a5b1299044d44 401 Gene3D G3DSA:3.30.70.360 200 296 1.6E-23 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS07840 471ac5e0aabecfa1da8a5b1299044d44 401 SUPERFAMILY SSF55031 191 297 8.52E-22 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS19280 5163f1e6c631cfb882a37545217584fa 337 SMART SM00342 246 331 2.7E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RR42_RS19280 5163f1e6c631cfb882a37545217584fa 337 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 283 327 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RR42_RS19280 5163f1e6c631cfb882a37545217584fa 337 SUPERFAMILY SSF46689 230 280 5.82E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS19280 5163f1e6c631cfb882a37545217584fa 337 PANTHER PTHR11019:SF54 67 334 4.7E-42 T 23-04-2016 RR42_RS19280 5163f1e6c631cfb882a37545217584fa 337 Pfam PF14525 AraC-binding-like domain 35 209 1.1E-47 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RR42_RS19280 5163f1e6c631cfb882a37545217584fa 337 Pfam PF12833 Helix-turn-helix domain 252 333 2.9E-25 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RR42_RS19280 5163f1e6c631cfb882a37545217584fa 337 Gene3D G3DSA:1.10.10.60 283 330 8.4E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS19280 5163f1e6c631cfb882a37545217584fa 337 PANTHER PTHR11019 67 334 4.7E-42 T 23-04-2016 RR42_RS19280 5163f1e6c631cfb882a37545217584fa 337 Gene3D G3DSA:1.10.10.60 229 282 3.4E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 SUPERFAMILY SSF55008 87 155 2.09E-20 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 218 814 1.4E-165 T 23-04-2016 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 236 813 5.8E-179 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 Gene3D G3DSA:3.40.1110.10 527 638 1.5E-12 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 711 730 3.3E-26 T 23-04-2016 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 350 364 3.3E-26 T 23-04-2016 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 658 668 3.3E-26 T 23-04-2016 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 734 746 3.3E-26 T 23-04-2016 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 500 514 3.3E-26 T 23-04-2016 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 SUPERFAMILY SSF81665 401 492 1.83E-14 T 23-04-2016 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 SUPERFAMILY SSF81665 255 304 1.83E-14 T 23-04-2016 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 Pfam PF00122 E1-E2 ATPase 271 491 2.4E-66 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 PANTHER PTHR24093 21 818 3.0E-274 T 23-04-2016 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 Pfam PF00403 Heavy-metal-associated domain 90 150 7.3E-15 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 Pfam PF00403 Heavy-metal-associated domain 24 83 2.3E-13 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 Gene3D G3DSA:2.70.150.10 255 401 7.1E-28 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 502 508 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 PANTHER PTHR24093:SF332 21 818 3.0E-274 T 23-04-2016 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 Gene3D G3DSA:3.30.70.100 87 155 2.1E-23 T 23-04-2016 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 ProSitePatterns PS01047 Heavy-metal-associated domain. 26 55 - T 23-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 ProSitePatterns PS01047 Heavy-metal-associated domain. 93 122 - T 23-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 Pfam PF00702 haloacid dehalogenase-like hydrolase 496 725 2.4E-44 T 23-04-2016 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 Gene3D G3DSA:3.30.70.100 22 84 1.8E-21 T 23-04-2016 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 SUPERFAMILY SSF81653 303 400 2.88E-26 T 23-04-2016 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 SUPERFAMILY SSF56784 498 518 2.32E-55 T 23-04-2016 IPR023214 HAD-like domain RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 SUPERFAMILY SSF56784 560 600 2.32E-55 T 23-04-2016 IPR023214 HAD-like domain RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 SUPERFAMILY SSF56784 633 811 2.32E-55 T 23-04-2016 IPR023214 HAD-like domain RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 24 84 1.0E-11 T 23-04-2016 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 90 152 1.9E-8 T 23-04-2016 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 SUPERFAMILY SSF55008 20 84 9.16E-17 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 631 791 3.2E-39 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 273 519 8.7E-42 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 Gene3D G3DSA:3.40.50.1000 471 516 7.6E-53 T 23-04-2016 IPR023214 HAD-like domain RR42_RS20305 c75d4f864c8f946dab03e402496caf22 823 Gene3D G3DSA:3.40.50.1000 639 779 7.6E-53 T 23-04-2016 IPR023214 HAD-like domain RR42_RS03480 e31285b07dd1136c576d06e0f672f8a2 193 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 3.5E-35 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RR42_RS03480 e31285b07dd1136c576d06e0f672f8a2 193 PANTHER PTHR11404 1 192 4.2E-115 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RR42_RS03480 e31285b07dd1136c576d06e0f672f8a2 193 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 23-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RR42_RS03480 e31285b07dd1136c576d06e0f672f8a2 193 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 6.9E-24 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RR42_RS03480 e31285b07dd1136c576d06e0f672f8a2 193 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 6.9E-24 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RR42_RS03480 e31285b07dd1136c576d06e0f672f8a2 193 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 6.9E-24 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RR42_RS03480 e31285b07dd1136c576d06e0f672f8a2 193 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 6.9E-24 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RR42_RS03480 e31285b07dd1136c576d06e0f672f8a2 193 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 6.9E-24 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RR42_RS03480 e31285b07dd1136c576d06e0f672f8a2 193 SUPERFAMILY SSF46609 1 84 3.4E-36 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RR42_RS03480 e31285b07dd1136c576d06e0f672f8a2 193 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 1.2E-42 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RR42_RS03480 e31285b07dd1136c576d06e0f672f8a2 193 PANTHER PTHR11404:SF8 1 192 4.2E-115 T 23-04-2016 RR42_RS03480 e31285b07dd1136c576d06e0f672f8a2 193 PIRSF PIRSF000349 1 193 9.1E-92 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RR42_RS03480 e31285b07dd1136c576d06e0f672f8a2 193 SUPERFAMILY SSF54719 82 191 9.04E-48 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RR42_RS03480 e31285b07dd1136c576d06e0f672f8a2 193 Gene3D G3DSA:1.10.287.990 20 82 8.5E-26 T 23-04-2016 RR42_RS19125 63d3f9f6e6a57351f62e2cde144c605d 326 Gene3D G3DSA:3.30.1360.10 5 63 1.1E-10 T 23-04-2016 RR42_RS19125 63d3f9f6e6a57351f62e2cde144c605d 326 SUPERFAMILY SSF56553 50 174 1.01E-41 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19125 63d3f9f6e6a57351f62e2cde144c605d 326 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 21 314 1.9E-107 T 23-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RR42_RS19125 63d3f9f6e6a57351f62e2cde144c605d 326 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 324 5.0E-35 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RR42_RS19125 63d3f9f6e6a57351f62e2cde144c605d 326 SUPERFAMILY SSF55257 175 228 5.4E-31 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RR42_RS19125 63d3f9f6e6a57351f62e2cde144c605d 326 SUPERFAMILY SSF55257 5 50 5.4E-31 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RR42_RS19125 63d3f9f6e6a57351f62e2cde144c605d 326 SMART SM00662 20 230 7.9E-96 T 23-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19125 63d3f9f6e6a57351f62e2cde144c605d 326 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 248 306 7.2E-25 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RR42_RS19125 63d3f9f6e6a57351f62e2cde144c605d 326 PANTHER PTHR32108:SF0 6 326 2.7E-141 T 23-04-2016 RR42_RS19125 63d3f9f6e6a57351f62e2cde144c605d 326 Gene3D G3DSA:2.170.120.12 64 173 4.8E-42 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19125 63d3f9f6e6a57351f62e2cde144c605d 326 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 224 2.0E-22 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RR42_RS19125 63d3f9f6e6a57351f62e2cde144c605d 326 SUPERFAMILY SSF47789 249 322 4.58E-27 T 23-04-2016 RR42_RS19125 63d3f9f6e6a57351f62e2cde144c605d 326 PANTHER PTHR32108 6 326 2.7E-141 T 23-04-2016 RR42_RS19125 63d3f9f6e6a57351f62e2cde144c605d 326 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 2 315 35.406 T 23-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RR42_RS19125 63d3f9f6e6a57351f62e2cde144c605d 326 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 61 150 3.4E-24 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19125 63d3f9f6e6a57351f62e2cde144c605d 326 Gene3D G3DSA:1.10.150.20 245 322 1.4E-36 T 23-04-2016 RR42_RS02720 969992cf62ac7a53ce4f88928e60b028 524 Gene3D G3DSA:3.40.140.20 372 514 1.8E-55 T 23-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RR42_RS02720 969992cf62ac7a53ce4f88928e60b028 524 PANTHER PTHR11692:SF2 1 524 0.0 T 23-04-2016 RR42_RS02720 969992cf62ac7a53ce4f88928e60b028 524 Pfam PF02142 MGS-like domain 14 129 5.3E-31 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain RR42_RS02720 969992cf62ac7a53ce4f88928e60b028 524 SUPERFAMILY SSF52335 2 193 3.66E-72 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain RR42_RS02720 969992cf62ac7a53ce4f88928e60b028 524 Gene3D G3DSA:3.40.50.1380 1 187 3.7E-87 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain RR42_RS02720 969992cf62ac7a53ce4f88928e60b028 524 Gene3D G3DSA:3.40.140.20 247 364 2.0E-47 T 23-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RR42_RS02720 969992cf62ac7a53ce4f88928e60b028 524 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3 524 4.4E-225 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RR42_RS02720 969992cf62ac7a53ce4f88928e60b028 524 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 524 44.91 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RR42_RS02720 969992cf62ac7a53ce4f88928e60b028 524 Pfam PF01808 AICARFT/IMPCHase bienzyme 134 454 9.5E-119 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RR42_RS02720 969992cf62ac7a53ce4f88928e60b028 524 PIRSF PIRSF000414 1 524 3.0E-217 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RR42_RS02720 969992cf62ac7a53ce4f88928e60b028 524 SMART SM00851 14 129 1.3E-64 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain RR42_RS02720 969992cf62ac7a53ce4f88928e60b028 524 SMART SM00798 134 456 4.2E-207 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RR42_RS02720 969992cf62ac7a53ce4f88928e60b028 524 SUPERFAMILY SSF53927 215 524 3.11E-125 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RR42_RS02720 969992cf62ac7a53ce4f88928e60b028 524 PANTHER PTHR11692 1 524 0.0 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RR42_RS00870 08dfcc62846c8b7c88b84c21cbbba7ca 396 PANTHER PTHR10909:SF326 12 392 1.2E-256 T 23-04-2016 RR42_RS00870 08dfcc62846c8b7c88b84c21cbbba7ca 396 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 131 226 1.1E-27 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RR42_RS00870 08dfcc62846c8b7c88b84c21cbbba7ca 396 Gene3D G3DSA:2.40.110.10 130 226 1.8E-41 T 23-04-2016 RR42_RS00870 08dfcc62846c8b7c88b84c21cbbba7ca 396 PANTHER PTHR10909 12 392 1.2E-256 T 23-04-2016 RR42_RS00870 08dfcc62846c8b7c88b84c21cbbba7ca 396 Gene3D G3DSA:1.20.140.10 227 393 7.0E-60 T 23-04-2016 RR42_RS00870 08dfcc62846c8b7c88b84c21cbbba7ca 396 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 133 145 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RR42_RS00870 08dfcc62846c8b7c88b84c21cbbba7ca 396 Gene3D G3DSA:1.10.540.10 6 129 2.3E-43 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS00870 08dfcc62846c8b7c88b84c21cbbba7ca 396 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 16 127 3.3E-38 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS00870 08dfcc62846c8b7c88b84c21cbbba7ca 396 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 240 391 3.2E-39 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS00870 08dfcc62846c8b7c88b84c21cbbba7ca 396 SUPERFAMILY SSF56645 9 251 2.75E-87 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RR42_RS00870 08dfcc62846c8b7c88b84c21cbbba7ca 396 SUPERFAMILY SSF47203 237 394 1.93E-43 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS00870 08dfcc62846c8b7c88b84c21cbbba7ca 396 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 350 369 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RR42_RS04695 a17ff118a49f0f09698767f951d1c645 204 PANTHER PTHR30328 1 126 2.9E-16 T 23-04-2016 RR42_RS04695 a17ff118a49f0f09698767f951d1c645 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.2E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS04695 a17ff118a49f0f09698767f951d1c645 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.2E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS04695 a17ff118a49f0f09698767f951d1c645 204 ProSitePatterns PS01081 TetR-type HTH domain signature. 24 55 - T 23-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RR42_RS04695 a17ff118a49f0f09698767f951d1c645 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 2.3E-12 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS04695 a17ff118a49f0f09698767f951d1c645 204 PANTHER PTHR30328:SF11 1 126 2.9E-16 T 23-04-2016 RR42_RS04695 a17ff118a49f0f09698767f951d1c645 204 SUPERFAMILY SSF46689 1 69 7.98E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS04695 a17ff118a49f0f09698767f951d1c645 204 Gene3D G3DSA:1.10.357.10 10 191 6.6E-26 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS03415 875b3051016423b4d0630a826a515423 501 Gene3D G3DSA:3.40.630.40 270 366 7.1E-60 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RR42_RS03415 875b3051016423b4d0630a826a515423 501 Gene3D G3DSA:3.40.630.40 414 489 7.1E-60 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RR42_RS03415 875b3051016423b4d0630a826a515423 501 SUPERFAMILY SSF53187 270 365 2.2E-54 T 23-04-2016 RR42_RS03415 875b3051016423b4d0630a826a515423 501 SUPERFAMILY SSF53187 413 489 2.2E-54 T 23-04-2016 RR42_RS03415 875b3051016423b4d0630a826a515423 501 Pfam PF11741 AMIN domain 51 154 3.0E-22 T 23-04-2016 IPR021731 AMIN domain RR42_RS03415 875b3051016423b4d0630a826a515423 501 PANTHER PTHR30404 258 494 2.2E-102 T 23-04-2016 RR42_RS03415 875b3051016423b4d0630a826a515423 501 PANTHER PTHR30404 48 191 2.2E-102 T 23-04-2016 RR42_RS03415 875b3051016423b4d0630a826a515423 501 SMART SM00646 331 486 6.6E-62 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RR42_RS03415 875b3051016423b4d0630a826a515423 501 PANTHER PTHR30404:SF0 258 494 2.2E-102 T 23-04-2016 RR42_RS03415 875b3051016423b4d0630a826a515423 501 PANTHER PTHR30404:SF0 48 191 2.2E-102 T 23-04-2016 RR42_RS03415 875b3051016423b4d0630a826a515423 501 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 271 486 7.8E-49 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RR42_RS01980 66109a9ca26af1d8ee8505c053d9880f 508 SUPERFAMILY SSF63411 302 491 1.26E-35 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RR42_RS01980 66109a9ca26af1d8ee8505c053d9880f 508 Gene3D G3DSA:3.30.830.10 67 298 2.6E-55 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 RR42_RS01980 66109a9ca26af1d8ee8505c053d9880f 508 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 108 131 - T 23-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 RR42_RS01980 66109a9ca26af1d8ee8505c053d9880f 508 SUPERFAMILY SSF63411 76 281 1.23E-58 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RR42_RS01980 66109a9ca26af1d8ee8505c053d9880f 508 Pfam PF00675 Insulinase (Peptidase family M16) 87 233 6.9E-25 T 23-04-2016 IPR011765 Peptidase M16, N-terminal RR42_RS01980 66109a9ca26af1d8ee8505c053d9880f 508 PANTHER PTHR11851 77 496 2.1E-104 T 23-04-2016 RR42_RS01980 66109a9ca26af1d8ee8505c053d9880f 508 Gene3D G3DSA:3.30.830.10 299 487 6.1E-29 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 RR42_RS01980 66109a9ca26af1d8ee8505c053d9880f 508 Pfam PF05193 Peptidase M16 inactive domain 243 423 6.2E-27 T 23-04-2016 IPR007863 Peptidase M16, C-terminal RR42_RS01980 66109a9ca26af1d8ee8505c053d9880f 508 PANTHER PTHR11851:SF136 77 496 2.1E-104 T 23-04-2016 RR42_RS10925 c4ba334cfa8bc48af0b60768b55afe2e 275 PANTHER PTHR17985:SF8 2 248 1.1E-77 T 23-04-2016 RR42_RS10925 c4ba334cfa8bc48af0b60768b55afe2e 275 Pfam PF05742 Transport and Golgi organisation 2 1 248 7.7E-70 T 23-04-2016 IPR008551 Transport and Golgi organisation protein 2 RR42_RS10925 c4ba334cfa8bc48af0b60768b55afe2e 275 PANTHER PTHR17985 2 248 1.1E-77 T 23-04-2016 IPR008551 Transport and Golgi organisation protein 2 RR42_RS01335 114cdb0b730e50459b997bd7ad867832 515 Gene3D G3DSA:3.90.226.10 5 250 5.2E-47 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS01335 114cdb0b730e50459b997bd7ad867832 515 PANTHER PTHR22855:SF40 7 515 2.1E-144 T 23-04-2016 RR42_RS01335 114cdb0b730e50459b997bd7ad867832 515 SUPERFAMILY SSF52096 4 255 7.63E-48 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS01335 114cdb0b730e50459b997bd7ad867832 515 PANTHER PTHR22855 7 515 2.1E-144 T 23-04-2016 RR42_RS01335 114cdb0b730e50459b997bd7ad867832 515 Gene3D G3DSA:3.90.226.10 251 500 3.4E-56 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS01335 114cdb0b730e50459b997bd7ad867832 515 SUPERFAMILY SSF52096 228 506 1.16E-65 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS01335 114cdb0b730e50459b997bd7ad867832 515 Pfam PF01039 Carboxyl transferase domain 29 500 1.5E-83 T 23-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RR42_RS18065 9d1b53d186e2c0af2f9f76d3dd22f3f5 327 SUPERFAMILY SSF52440 16 108 5.66E-30 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RR42_RS18065 9d1b53d186e2c0af2f9f76d3dd22f3f5 327 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 75 86 - T 23-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS18065 9d1b53d186e2c0af2f9f76d3dd22f3f5 327 Gene3D G3DSA:3.40.50.20 16 96 3.6E-27 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RR42_RS18065 9d1b53d186e2c0af2f9f76d3dd22f3f5 327 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 16 314 3.2E-97 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS18065 9d1b53d186e2c0af2f9f76d3dd22f3f5 327 Pfam PF01820 D-ala D-ala ligase N-terminus 16 98 6.9E-21 T 23-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS18065 9d1b53d186e2c0af2f9f76d3dd22f3f5 327 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 15 315 35.446 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS18065 9d1b53d186e2c0af2f9f76d3dd22f3f5 327 Gene3D G3DSA:3.30.1490.20 119 185 3.5E-21 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RR42_RS18065 9d1b53d186e2c0af2f9f76d3dd22f3f5 327 Gene3D G3DSA:3.30.470.20 97 115 4.9E-47 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RR42_RS18065 9d1b53d186e2c0af2f9f76d3dd22f3f5 327 Gene3D G3DSA:3.30.470.20 186 314 4.9E-47 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RR42_RS18065 9d1b53d186e2c0af2f9f76d3dd22f3f5 327 PANTHER PTHR23132 16 314 2.1E-91 T 23-04-2016 RR42_RS18065 9d1b53d186e2c0af2f9f76d3dd22f3f5 327 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 257 285 - T 23-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS18065 9d1b53d186e2c0af2f9f76d3dd22f3f5 327 SUPERFAMILY SSF56059 108 318 2.73E-55 T 23-04-2016 RR42_RS18065 9d1b53d186e2c0af2f9f76d3dd22f3f5 327 Pfam PF07478 D-ala D-ala ligase C-terminus 115 311 5.3E-58 T 23-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS05595 f46fd7b0217336446d9c74896df56d68 400 Gene3D G3DSA:1.20.140.10 234 398 3.9E-35 T 23-04-2016 RR42_RS05595 f46fd7b0217336446d9c74896df56d68 400 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 397 4.3E-27 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS05595 f46fd7b0217336446d9c74896df56d68 400 PANTHER PTHR10909:SF229 368 400 5.0E-156 T 23-04-2016 RR42_RS05595 f46fd7b0217336446d9c74896df56d68 400 PANTHER PTHR10909:SF229 1 349 5.0E-156 T 23-04-2016 RR42_RS05595 f46fd7b0217336446d9c74896df56d68 400 Gene3D G3DSA:1.10.540.10 1 119 2.2E-25 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS05595 f46fd7b0217336446d9c74896df56d68 400 Gene3D G3DSA:2.40.110.10 124 232 1.3E-34 T 23-04-2016 RR42_RS05595 f46fd7b0217336446d9c74896df56d68 400 SUPERFAMILY SSF47203 233 400 5.64E-27 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS05595 f46fd7b0217336446d9c74896df56d68 400 SUPERFAMILY SSF56645 2 246 3.66E-74 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RR42_RS05595 f46fd7b0217336446d9c74896df56d68 400 PANTHER PTHR10909 368 400 5.0E-156 T 23-04-2016 RR42_RS05595 f46fd7b0217336446d9c74896df56d68 400 PANTHER PTHR10909 1 349 5.0E-156 T 23-04-2016 RR42_RS05595 f46fd7b0217336446d9c74896df56d68 400 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 221 1.1E-20 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RR42_RS05595 f46fd7b0217336446d9c74896df56d68 400 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 119 4.5E-20 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS03230 e415abdfc9540b5fc35041673d31a80e 414 SUPERFAMILY SSF52440 29 129 1.21E-24 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RR42_RS03230 e415abdfc9540b5fc35041673d31a80e 414 PANTHER PTHR11609 16 401 2.5E-120 T 23-04-2016 RR42_RS03230 e415abdfc9540b5fc35041673d31a80e 414 Gene3D G3DSA:3.30.470.20 214 407 5.9E-67 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RR42_RS03230 e415abdfc9540b5fc35041673d31a80e 414 Gene3D G3DSA:3.30.1490.20 151 213 4.7E-18 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RR42_RS03230 e415abdfc9540b5fc35041673d31a80e 414 PANTHER PTHR11609:SF5 16 401 2.5E-120 T 23-04-2016 RR42_RS03230 e415abdfc9540b5fc35041673d31a80e 414 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 35 396 39.607 T 23-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 RR42_RS03230 e415abdfc9540b5fc35041673d31a80e 414 Pfam PF02222 ATP-grasp domain 145 314 2.4E-50 T 23-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 RR42_RS03230 e415abdfc9540b5fc35041673d31a80e 414 SUPERFAMILY SSF51246 339 409 1.18E-14 T 23-04-2016 IPR011054 Rudiment single hybrid motif RR42_RS03230 e415abdfc9540b5fc35041673d31a80e 414 Gene3D G3DSA:3.40.50.20 31 141 9.4E-35 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RR42_RS03230 e415abdfc9540b5fc35041673d31a80e 414 SUPERFAMILY SSF56059 137 334 1.34E-56 T 23-04-2016 RR42_RS03230 e415abdfc9540b5fc35041673d31a80e 414 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 36 399 2.9E-112 T 23-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 RR42_RS11870 6e0a07dbcc5970eacf669a27c623295c 292 SUPERFAMILY SSF46934 3 56 3.06E-13 T 23-04-2016 IPR009060 UBA-like GO:0005515 RR42_RS11870 6e0a07dbcc5970eacf669a27c623295c 292 SUPERFAMILY SSF54713 56 144 3.4E-24 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RR42_RS11870 6e0a07dbcc5970eacf669a27c623295c 292 PANTHER PTHR11741 1 289 9.0E-115 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 RR42_RS11870 6e0a07dbcc5970eacf669a27c623295c 292 Gene3D G3DSA:1.10.8.10 3 55 4.9E-21 T 23-04-2016 RR42_RS11870 6e0a07dbcc5970eacf669a27c623295c 292 SUPERFAMILY SSF54713 149 286 1.64E-48 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RR42_RS11870 6e0a07dbcc5970eacf669a27c623295c 292 Gene3D G3DSA:3.30.479.20 57 148 2.4E-18 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RR42_RS11870 6e0a07dbcc5970eacf669a27c623295c 292 Gene3D G3DSA:3.30.479.20 233 268 4.3E-26 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RR42_RS11870 6e0a07dbcc5970eacf669a27c623295c 292 Gene3D G3DSA:3.30.479.20 150 184 4.3E-26 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RR42_RS11870 6e0a07dbcc5970eacf669a27c623295c 292 Gene3D G3DSA:1.10.286.20 191 232 3.2E-19 T 23-04-2016 RR42_RS11870 6e0a07dbcc5970eacf669a27c623295c 292 Pfam PF00889 Elongation factor TS 71 269 4.8E-69 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RR42_RS11870 6e0a07dbcc5970eacf669a27c623295c 292 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 23-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 RR42_RS11870 6e0a07dbcc5970eacf669a27c623295c 292 Hamap MF_00050 Elongation factor Ts [tsf]. 1 286 78.795 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 RR42_RS11870 6e0a07dbcc5970eacf669a27c623295c 292 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 286 2.3E-91 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 RR42_RS14340 4a907e761bf5d39f8b1fd55ddd351249 436 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 45 68 - T 23-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 RR42_RS14340 4a907e761bf5d39f8b1fd55ddd351249 436 SUPERFAMILY SSF53623 6 291 1.83E-86 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS14340 4a907e761bf5d39f8b1fd55ddd351249 436 Gene3D G3DSA:3.40.1190.10 8 293 2.4E-90 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS14340 4a907e761bf5d39f8b1fd55ddd351249 436 PANTHER PTHR11136 9 430 1.2E-117 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 RR42_RS14340 4a907e761bf5d39f8b1fd55ddd351249 436 PIRSF PIRSF001563 4 436 4.4E-106 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 RR42_RS14340 4a907e761bf5d39f8b1fd55ddd351249 436 Pfam PF08245 Mur ligase middle domain 47 269 8.0E-10 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS14340 4a907e761bf5d39f8b1fd55ddd351249 436 SUPERFAMILY SSF53244 293 430 3.48E-31 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RR42_RS14340 4a907e761bf5d39f8b1fd55ddd351249 436 TIGRFAM TIGR01499 folC: bifunctional protein FolC 26 430 3.7E-102 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 RR42_RS14340 4a907e761bf5d39f8b1fd55ddd351249 436 Gene3D G3DSA:3.90.190.20 295 430 1.5E-40 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RR42_RS14975 138a7cf6e5868bf856daf1a5d6b0e63b 604 Gene3D G3DSA:1.20.50.20 375 432 1.6E-16 T 23-04-2016 RR42_RS14975 138a7cf6e5868bf856daf1a5d6b0e63b 604 PIRSF PIRSF002811 1 603 4.1E-142 T 23-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 RR42_RS14975 138a7cf6e5868bf856daf1a5d6b0e63b 604 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 258 6.7E-36 T 23-04-2016 IPR013264 DNA primase, catalytic core, N-terminal RR42_RS14975 138a7cf6e5868bf856daf1a5d6b0e63b 604 Pfam PF13662 Toprim domain 268 333 3.8E-15 T 23-04-2016 IPR006171 Toprim domain RR42_RS14975 138a7cf6e5868bf856daf1a5d6b0e63b 604 Gene3D G3DSA:3.40.1360.10 248 374 3.4E-44 T 23-04-2016 RR42_RS14975 138a7cf6e5868bf856daf1a5d6b0e63b 604 PANTHER PTHR30313 1 604 1.1E-133 T 23-04-2016 RR42_RS14975 138a7cf6e5868bf856daf1a5d6b0e63b 604 SUPERFAMILY SSF57783 2 97 9.86E-36 T 23-04-2016 RR42_RS14975 138a7cf6e5868bf856daf1a5d6b0e63b 604 SUPERFAMILY SSF117023 466 596 5.62E-6 T 23-04-2016 RR42_RS14975 138a7cf6e5868bf856daf1a5d6b0e63b 604 SUPERFAMILY SSF56731 116 428 3.27E-99 T 23-04-2016 RR42_RS14975 138a7cf6e5868bf856daf1a5d6b0e63b 604 Hamap MF_00974 DNA primase [dnaG]. 1 594 28.04 T 23-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 RR42_RS14975 138a7cf6e5868bf856daf1a5d6b0e63b 604 Pfam PF08278 DNA primase DnaG DnaB-binding 466 591 2.4E-12 T 23-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 RR42_RS14975 138a7cf6e5868bf856daf1a5d6b0e63b 604 Pfam PF01807 CHC2 zinc finger 3 97 3.5E-39 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RR42_RS14975 138a7cf6e5868bf856daf1a5d6b0e63b 604 Gene3D G3DSA:3.90.980.10 116 247 4.6E-40 T 23-04-2016 IPR013264 DNA primase, catalytic core, N-terminal RR42_RS14975 138a7cf6e5868bf856daf1a5d6b0e63b 604 SMART SM00493 266 337 7.0E-15 T 23-04-2016 IPR006171 Toprim domain RR42_RS14975 138a7cf6e5868bf856daf1a5d6b0e63b 604 SMART SM00766 464 594 1.0E-10 T 23-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 RR42_RS14975 138a7cf6e5868bf856daf1a5d6b0e63b 604 Pfam PF10410 DnaB-helicase binding domain of primase 376 429 4.5E-9 T 23-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 RR42_RS14975 138a7cf6e5868bf856daf1a5d6b0e63b 604 TIGRFAM TIGR01391 dnaG: DNA primase 2 424 1.0E-136 T 23-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 RR42_RS14975 138a7cf6e5868bf856daf1a5d6b0e63b 604 SMART SM00400 33 87 7.4E-33 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RR42_RS14975 138a7cf6e5868bf856daf1a5d6b0e63b 604 Gene3D G3DSA:3.90.580.10 2 98 1.3E-39 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RR42_RS14975 138a7cf6e5868bf856daf1a5d6b0e63b 604 Gene3D G3DSA:1.10.860.10 451 593 4.4E-9 T 23-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RR42_RS14380 a549e358dba1678b2223a04d0ee09693 378 SUPERFAMILY SSF51735 3 146 1.13E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS14380 a549e358dba1678b2223a04d0ee09693 378 Gene3D G3DSA:3.40.50.720 2 141 9.3E-65 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS14380 a549e358dba1678b2223a04d0ee09693 378 PIRSF PIRSF000148 1 378 2.3E-65 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RR42_RS14380 a549e358dba1678b2223a04d0ee09693 378 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 120 4.2E-26 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RR42_RS14380 a549e358dba1678b2223a04d0ee09693 378 PANTHER PTHR10174 102 178 3.2E-132 T 23-04-2016 RR42_RS14380 a549e358dba1678b2223a04d0ee09693 378 PANTHER PTHR10174 200 377 3.2E-132 T 23-04-2016 RR42_RS14380 a549e358dba1678b2223a04d0ee09693 378 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 270 284 - T 23-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RR42_RS14380 a549e358dba1678b2223a04d0ee09693 378 SUPERFAMILY SSF55347 133 363 2.59E-71 T 23-04-2016 RR42_RS14380 a549e358dba1678b2223a04d0ee09693 378 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 376 32.778 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RR42_RS14380 a549e358dba1678b2223a04d0ee09693 378 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 376 1.8E-186 T 23-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RR42_RS14380 a549e358dba1678b2223a04d0ee09693 378 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 362 1.3E-50 T 23-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RR42_RS14380 a549e358dba1678b2223a04d0ee09693 378 Gene3D G3DSA:3.30.360.10 142 359 1.1E-70 T 23-04-2016 RR42_RS14380 a549e358dba1678b2223a04d0ee09693 378 SMART SM00859 2 121 1.3E-29 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RR42_RS14380 a549e358dba1678b2223a04d0ee09693 378 PANTHER PTHR10174:SF116 102 178 3.2E-132 T 23-04-2016 RR42_RS14380 a549e358dba1678b2223a04d0ee09693 378 PANTHER PTHR10174:SF116 200 377 3.2E-132 T 23-04-2016 RR42_RS02135 07802119fff3d2923266d211850152cd 161 Gene3D G3DSA:3.40.1520.10 14 102 3.1E-49 T 23-04-2016 IPR007153 Adenosine specific kinase RR42_RS02135 07802119fff3d2923266d211850152cd 161 PANTHER PTHR36155 1 161 6.9E-97 T 23-04-2016 RR42_RS02135 07802119fff3d2923266d211850152cd 161 Gene3D G3DSA:2.10.70.30 103 143 2.3E-29 T 23-04-2016 RR42_RS02135 07802119fff3d2923266d211850152cd 161 SUPERFAMILY SSF103165 1 161 1.03E-71 T 23-04-2016 IPR007153 Adenosine specific kinase RR42_RS02135 07802119fff3d2923266d211850152cd 161 Pfam PF04008 Adenosine specific kinase 6 160 1.4E-71 T 23-04-2016 IPR007153 Adenosine specific kinase RR42_RS02135 07802119fff3d2923266d211850152cd 161 PANTHER PTHR36155:SF1 1 161 6.9E-97 T 23-04-2016 RR42_RS12605 608d0609ddc4831501abec5af72d8fd1 124 SUPERFAMILY SSF54995 1 104 1.28E-35 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RR42_RS12605 608d0609ddc4831501abec5af72d8fd1 124 Pfam PF01250 Ribosomal protein S6 3 90 1.5E-26 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RR42_RS12605 608d0609ddc4831501abec5af72d8fd1 124 Gene3D G3DSA:3.30.70.60 1 104 3.6E-41 T 23-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RR42_RS12605 608d0609ddc4831501abec5af72d8fd1 124 PANTHER PTHR21011:SF1 1 124 8.1E-37 T 23-04-2016 RR42_RS12605 608d0609ddc4831501abec5af72d8fd1 124 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.243 T 23-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 RR42_RS12605 608d0609ddc4831501abec5af72d8fd1 124 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 2.3E-32 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RR42_RS12605 608d0609ddc4831501abec5af72d8fd1 124 PANTHER PTHR21011 1 124 8.1E-37 T 23-04-2016 RR42_RS02790 0d350356fc57b332bf72e2c82690d3b2 340 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 19 28 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS02790 0d350356fc57b332bf72e2c82690d3b2 340 SUPERFAMILY SSF52374 12 337 3.22E-79 T 23-04-2016 RR42_RS02790 0d350356fc57b332bf72e2c82690d3b2 340 PANTHER PTHR10055:SF6 9 340 3.6E-161 T 23-04-2016 RR42_RS02790 0d350356fc57b332bf72e2c82690d3b2 340 PANTHER PTHR10055 9 340 3.6E-161 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RR42_RS02790 0d350356fc57b332bf72e2c82690d3b2 340 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 10 337 7.4E-76 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RR42_RS02790 0d350356fc57b332bf72e2c82690d3b2 340 Gene3D G3DSA:3.40.50.620 9 219 3.6E-71 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS02790 0d350356fc57b332bf72e2c82690d3b2 340 Pfam PF00579 tRNA synthetases class I (W and Y) 12 291 2.3E-52 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS02790 0d350356fc57b332bf72e2c82690d3b2 340 Gene3D G3DSA:1.10.240.10 220 326 2.2E-33 T 23-04-2016 RR42_RS02790 0d350356fc57b332bf72e2c82690d3b2 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 152 173 2.2E-24 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RR42_RS02790 0d350356fc57b332bf72e2c82690d3b2 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 204 214 2.2E-24 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RR42_RS02790 0d350356fc57b332bf72e2c82690d3b2 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 23 39 2.2E-24 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RR42_RS02790 0d350356fc57b332bf72e2c82690d3b2 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 74 93 2.2E-24 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RR42_RS19670 369c30be3f7beaa20174784098eef030 230 Gene3D G3DSA:1.10.760.10 117 221 1.1E-15 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS19670 369c30be3f7beaa20174784098eef030 230 PIRSF PIRSF024608 11 230 1.6E-76 T 23-04-2016 IPR016823 Sulfur oxidation c-type cytochrome SoxX, type II RR42_RS19670 369c30be3f7beaa20174784098eef030 230 SUPERFAMILY SSF46626 115 221 1.02E-12 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS19670 369c30be3f7beaa20174784098eef030 230 TIGRFAM TIGR04485 thiosulf_SoxX: sulfur oxidation c-type cytochrome SoxX 144 223 2.8E-27 T 23-04-2016 IPR030999 Sulfur oxidation c-type cytochrome SoxX RR42_RS29250 8c6aeb2cf2f05146fb4bbbaf698503e6 128 PANTHER PTHR11365 1 128 8.2E-49 T 23-04-2016 RR42_RS29250 8c6aeb2cf2f05146fb4bbbaf698503e6 128 PANTHER PTHR11365:SF2 1 128 8.2E-49 T 23-04-2016 RR42_RS29250 8c6aeb2cf2f05146fb4bbbaf698503e6 128 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 2 85 5.6E-24 T 23-04-2016 IPR008040 Hydantoinaseoxoprolinase, N-terminal RR42_RS02060 564e8f5d40d70f336ad85e3958db7f1c 305 PANTHER PTHR30448:SF0 133 302 1.1E-112 T 23-04-2016 RR42_RS02060 564e8f5d40d70f336ad85e3958db7f1c 305 PANTHER PTHR30448:SF0 1 106 1.1E-112 T 23-04-2016 RR42_RS02060 564e8f5d40d70f336ad85e3958db7f1c 305 Gene3D G3DSA:3.40.50.300 1 176 3.4E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02060 564e8f5d40d70f336ad85e3958db7f1c 305 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 303 39.319 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 RR42_RS02060 564e8f5d40d70f336ad85e3958db7f1c 305 SUPERFAMILY SSF52540 127 175 4.14E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02060 564e8f5d40d70f336ad85e3958db7f1c 305 SUPERFAMILY SSF52540 1 100 4.14E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02060 564e8f5d40d70f336ad85e3958db7f1c 305 PANTHER PTHR30448 133 302 1.1E-112 T 23-04-2016 RR42_RS02060 564e8f5d40d70f336ad85e3958db7f1c 305 PANTHER PTHR30448 1 106 1.1E-112 T 23-04-2016 RR42_RS02060 564e8f5d40d70f336ad85e3958db7f1c 305 PIRSF PIRSF005052 1 304 1.5E-109 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 RR42_RS02060 564e8f5d40d70f336ad85e3958db7f1c 305 Pfam PF03668 P-loop ATPase protein family 136 301 1.5E-57 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 RR42_RS02060 564e8f5d40d70f336ad85e3958db7f1c 305 Pfam PF03668 P-loop ATPase protein family 1 109 5.9E-33 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 RR42_RS11400 338d69f248e4a8e7fae62967d14f58c9 400 SUPERFAMILY SSF103473 3 384 2.22E-63 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS11400 338d69f248e4a8e7fae62967d14f58c9 400 PANTHER PTHR23501:SF4 1 387 1.3E-161 T 23-04-2016 RR42_RS11400 338d69f248e4a8e7fae62967d14f58c9 400 Gene3D G3DSA:1.20.1250.20 5 182 4.2E-27 T 23-04-2016 RR42_RS11400 338d69f248e4a8e7fae62967d14f58c9 400 Pfam PF07690 Major Facilitator Superfamily 9 321 1.6E-39 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS11400 338d69f248e4a8e7fae62967d14f58c9 400 Gene3D G3DSA:1.20.1250.20 200 381 7.2E-18 T 23-04-2016 RR42_RS11400 338d69f248e4a8e7fae62967d14f58c9 400 PANTHER PTHR23501 1 387 1.3E-161 T 23-04-2016 RR42_RS11400 338d69f248e4a8e7fae62967d14f58c9 400 PRINTS PR01035 Tetracycline resistance protein signature 231 251 1.8E-5 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RR42_RS11400 338d69f248e4a8e7fae62967d14f58c9 400 PRINTS PR01035 Tetracycline resistance protein signature 10 26 1.8E-5 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RR42_RS11400 338d69f248e4a8e7fae62967d14f58c9 400 PRINTS PR01035 Tetracycline resistance protein signature 40 59 1.8E-5 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RR42_RS11400 338d69f248e4a8e7fae62967d14f58c9 400 PRINTS PR01035 Tetracycline resistance protein signature 98 119 1.8E-5 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RR42_RS10120 15684670edba25831ffe2bf1255a75a7 399 Pfam PF03781 Sulfatase-modifying factor enzyme 1 184 323 5.4E-23 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme RR42_RS10120 15684670edba25831ffe2bf1255a75a7 399 SUPERFAMILY SSF109854 18 165 2.75E-11 T 23-04-2016 RR42_RS10120 15684670edba25831ffe2bf1255a75a7 399 Pfam PF12867 DinB superfamily 22 141 2.7E-5 T 23-04-2016 IPR024775 DinB-like domain RR42_RS10120 15684670edba25831ffe2bf1255a75a7 399 PANTHER PTHR23150:SF24 104 396 2.9E-41 T 23-04-2016 RR42_RS10120 15684670edba25831ffe2bf1255a75a7 399 Gene3D G3DSA:3.90.1580.10 183 323 2.7E-34 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme RR42_RS10120 15684670edba25831ffe2bf1255a75a7 399 Gene3D G3DSA:3.90.1580.10 324 398 3.0E-15 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme RR42_RS10120 15684670edba25831ffe2bf1255a75a7 399 SUPERFAMILY SSF56436 184 398 8.24E-52 T 23-04-2016 IPR016187 C-type lectin fold RR42_RS10120 15684670edba25831ffe2bf1255a75a7 399 PANTHER PTHR23150 104 396 2.9E-41 T 23-04-2016 RR42_RS01350 fa655b7b4a9a131eb189d74752d3be65 476 PANTHER PTHR18866 15 462 1.9E-193 T 23-04-2016 RR42_RS01350 fa655b7b4a9a131eb189d74752d3be65 476 Gene3D G3DSA:3.30.470.20 218 460 7.4E-83 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RR42_RS01350 fa655b7b4a9a131eb189d74752d3be65 476 Gene3D G3DSA:3.30.1490.20 145 216 4.0E-21 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RR42_RS01350 fa655b7b4a9a131eb189d74752d3be65 476 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 168 182 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RR42_RS01350 fa655b7b4a9a131eb189d74752d3be65 476 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 301 308 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RR42_RS01350 fa655b7b4a9a131eb189d74752d3be65 476 Gene3D G3DSA:3.40.50.20 17 144 4.6E-41 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RR42_RS01350 fa655b7b4a9a131eb189d74752d3be65 476 SMART SM00878 353 458 2.2E-55 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal RR42_RS01350 fa655b7b4a9a131eb189d74752d3be65 476 SUPERFAMILY SSF56059 98 366 5.48E-58 T 23-04-2016 RR42_RS01350 fa655b7b4a9a131eb189d74752d3be65 476 SUPERFAMILY SSF52440 11 128 3.53E-43 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RR42_RS01350 fa655b7b4a9a131eb189d74752d3be65 476 Pfam PF02785 Biotin carboxylase C-terminal domain 353 458 5.0E-36 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal RR42_RS01350 fa655b7b4a9a131eb189d74752d3be65 476 Pfam PF00289 Biotin carboxylase, N-terminal domain 17 124 2.2E-39 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain RR42_RS01350 fa655b7b4a9a131eb189d74752d3be65 476 SUPERFAMILY SSF51246 348 460 1.99E-39 T 23-04-2016 IPR011054 Rudiment single hybrid motif RR42_RS01350 fa655b7b4a9a131eb189d74752d3be65 476 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 131 337 8.4E-62 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RR42_RS16605 fc789e808431091a6831f0de8b7b9217 342 SUPERFAMILY SSF56935 31 342 4.27E-55 T 23-04-2016 RR42_RS16605 fc789e808431091a6831f0de8b7b9217 342 Gene3D G3DSA:2.40.160.10 31 342 2.5E-62 T 23-04-2016 IPR023614 Porin domain RR42_RS16605 fc789e808431091a6831f0de8b7b9217 342 Pfam PF13609 Gram-negative porin 15 324 1.2E-36 T 23-04-2016 RR42_RS01695 85c527cf69f1a429315cf214c83f87f9 433 Gene3D G3DSA:1.10.3860.10 6 407 1.5E-116 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS01695 85c527cf69f1a429315cf214c83f87f9 433 PRINTS PR00173 Glutamate-aspartate symporter signature 293 319 4.8E-21 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS01695 85c527cf69f1a429315cf214c83f87f9 433 PRINTS PR00173 Glutamate-aspartate symporter signature 146 168 4.8E-21 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS01695 85c527cf69f1a429315cf214c83f87f9 433 PRINTS PR00173 Glutamate-aspartate symporter signature 328 347 4.8E-21 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS01695 85c527cf69f1a429315cf214c83f87f9 433 PRINTS PR00173 Glutamate-aspartate symporter signature 75 100 4.8E-21 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS01695 85c527cf69f1a429315cf214c83f87f9 433 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 4.8E-21 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS01695 85c527cf69f1a429315cf214c83f87f9 433 PANTHER PTHR11958 3 427 9.8E-242 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS01695 85c527cf69f1a429315cf214c83f87f9 433 PANTHER PTHR11958:SF49 3 427 9.8E-242 T 23-04-2016 RR42_RS01695 85c527cf69f1a429315cf214c83f87f9 433 Pfam PF00375 Sodium:dicarboxylate symporter family 10 402 3.7E-111 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS01695 85c527cf69f1a429315cf214c83f87f9 433 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 37 52 - T 23-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS01695 85c527cf69f1a429315cf214c83f87f9 433 SUPERFAMILY SSF118215 10 403 8.5E-122 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS01695 85c527cf69f1a429315cf214c83f87f9 433 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 296 319 - T 23-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS01695 85c527cf69f1a429315cf214c83f87f9 433 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 3 429 38.336 T 23-04-2016 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 RR42_RS01975 8a7fc6d399c9a172e80336baa95e62eb 381 SUPERFAMILY SSF47364 86 161 2.09E-18 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RR42_RS01975 8a7fc6d399c9a172e80336baa95e62eb 381 Gene3D G3DSA:3.40.50.300 193 381 2.0E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01975 8a7fc6d399c9a172e80336baa95e62eb 381 Pfam PF00448 SRP54-type protein, GTPase domain 182 380 7.2E-71 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RR42_RS01975 8a7fc6d399c9a172e80336baa95e62eb 381 SMART SM00963 91 167 1.1E-16 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RR42_RS01975 8a7fc6d399c9a172e80336baa95e62eb 381 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 354 367 - T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RR42_RS01975 8a7fc6d399c9a172e80336baa95e62eb 381 SMART SM00382 180 359 1.3E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS01975 8a7fc6d399c9a172e80336baa95e62eb 381 SMART SM00962 181 381 5.7E-110 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RR42_RS01975 8a7fc6d399c9a172e80336baa95e62eb 381 PANTHER PTHR11564 81 380 6.9E-122 T 23-04-2016 RR42_RS01975 8a7fc6d399c9a172e80336baa95e62eb 381 SUPERFAMILY SSF52540 178 380 7.22E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01975 8a7fc6d399c9a172e80336baa95e62eb 381 Gene3D G3DSA:3.40.50.300 155 192 1.8E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01975 8a7fc6d399c9a172e80336baa95e62eb 381 Pfam PF02881 SRP54-type protein, helical bundle domain 105 161 2.6E-10 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RR42_RS01975 8a7fc6d399c9a172e80336baa95e62eb 381 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 110 381 58.35 T 23-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 RR42_RS01975 8a7fc6d399c9a172e80336baa95e62eb 381 Gene3D G3DSA:1.20.120.140 79 154 2.1E-23 T 23-04-2016 RR42_RS01975 8a7fc6d399c9a172e80336baa95e62eb 381 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 110 379 6.5E-102 T 23-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 RR42_RS01975 8a7fc6d399c9a172e80336baa95e62eb 381 PANTHER PTHR11564:SF16 81 380 6.9E-122 T 23-04-2016 RR42_RS14730 fae30a9f4e163412a52434f9537befd9 366 PIRSF PIRSF018005 48 366 1.2E-114 T 23-04-2016 IPR017804 Methyltransferase EgtD-like RR42_RS14730 fae30a9f4e163412a52434f9537befd9 366 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 239 361 2.2E-39 T 23-04-2016 IPR019257 Histidine-specific methyltransferase, SAM-dependent RR42_RS14730 fae30a9f4e163412a52434f9537befd9 366 PANTHER PTHR30468:SF6 19 365 2.4E-60 T 23-04-2016 RR42_RS14730 fae30a9f4e163412a52434f9537befd9 366 PANTHER PTHR30468 19 365 2.4E-60 T 23-04-2016 RR42_RS14730 fae30a9f4e163412a52434f9537befd9 366 SUPERFAMILY SSF53335 84 242 2.29E-7 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS14730 fae30a9f4e163412a52434f9537befd9 366 SUPERFAMILY SSF53335 329 364 2.29E-7 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS14730 fae30a9f4e163412a52434f9537befd9 366 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 67 363 8.5E-110 T 23-04-2016 IPR017804 Methyltransferase EgtD-like RR42_RS03095 28e7fb29d65487b529a121fbd4b0412a 388 SUPERFAMILY SSF52210 239 384 6.15E-55 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RR42_RS03095 28e7fb29d65487b529a121fbd4b0412a 388 Pfam PF08442 ATP-grasp domain 2 202 4.6E-80 T 23-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RR42_RS03095 28e7fb29d65487b529a121fbd4b0412a 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 8.9E-161 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 RR42_RS03095 28e7fb29d65487b529a121fbd4b0412a 388 Pfam PF00549 CoA-ligase 262 382 5.3E-24 T 23-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RR42_RS03095 28e7fb29d65487b529a121fbd4b0412a 388 SUPERFAMILY SSF56059 1 238 1.64E-85 T 23-04-2016 RR42_RS03095 28e7fb29d65487b529a121fbd4b0412a 388 Gene3D G3DSA:3.30.1490.20 22 95 1.6E-36 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RR42_RS03095 28e7fb29d65487b529a121fbd4b0412a 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 23-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RR42_RS03095 28e7fb29d65487b529a121fbd4b0412a 388 PANTHER PTHR11815 1 388 9.9E-231 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 RR42_RS03095 28e7fb29d65487b529a121fbd4b0412a 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.22 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 RR42_RS03095 28e7fb29d65487b529a121fbd4b0412a 388 Gene3D G3DSA:3.30.470.20 96 239 5.6E-58 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RR42_RS03095 28e7fb29d65487b529a121fbd4b0412a 388 Gene3D G3DSA:3.40.50.261 241 383 7.8E-65 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RR42_RS03095 28e7fb29d65487b529a121fbd4b0412a 388 PIRSF PIRSF001554 1 388 3.7E-154 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 RR42_RS20640 5b4d5a953dde0f226d9ee314a05818a0 251 Gene3D G3DSA:1.10.10.60 12 60 5.7E-22 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS20640 5b4d5a953dde0f226d9ee314a05818a0 251 SUPERFAMILY SSF46689 1 70 2.05E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS20640 5b4d5a953dde0f226d9ee314a05818a0 251 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.0E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS20640 5b4d5a953dde0f226d9ee314a05818a0 251 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.0E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS20640 5b4d5a953dde0f226d9ee314a05818a0 251 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 23-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RR42_RS20640 5b4d5a953dde0f226d9ee314a05818a0 251 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 3.9E-17 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS20640 5b4d5a953dde0f226d9ee314a05818a0 251 SUPERFAMILY SSF48498 83 202 2.28E-18 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RR42_RS20640 5b4d5a953dde0f226d9ee314a05818a0 251 Gene3D G3DSA:1.10.357.10 61 210 2.8E-24 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS20640 5b4d5a953dde0f226d9ee314a05818a0 251 PANTHER PTHR30328 1 215 2.6E-41 T 23-04-2016 RR42_RS20640 5b4d5a953dde0f226d9ee314a05818a0 251 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 204 6.0E-34 T 23-04-2016 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 RR42_RS20640 5b4d5a953dde0f226d9ee314a05818a0 251 PANTHER PTHR30328:SF26 1 215 2.6E-41 T 23-04-2016 RR42_RS13440 575f0424e341895cf2ee967ac5cf4e9e 447 Gene3D G3DSA:1.10.287.130 197 257 1.2E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS13440 575f0424e341895cf2ee967ac5cf4e9e 447 Gene3D G3DSA:3.30.450.20 93 187 4.2E-11 T 23-04-2016 RR42_RS13440 575f0424e341895cf2ee967ac5cf4e9e 447 SMART SM00388 206 272 3.1E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS13440 575f0424e341895cf2ee967ac5cf4e9e 447 SMART SM00387 316 428 1.6E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS13440 575f0424e341895cf2ee967ac5cf4e9e 447 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 271 3.4E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS13440 575f0424e341895cf2ee967ac5cf4e9e 447 Pfam PF13188 PAS domain 99 147 2.6E-6 T 23-04-2016 IPR000014 PAS domain RR42_RS13440 575f0424e341895cf2ee967ac5cf4e9e 447 Gene3D G3DSA:3.30.565.10 258 427 2.1E-46 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS13440 575f0424e341895cf2ee967ac5cf4e9e 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 4.4E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS13440 575f0424e341895cf2ee967ac5cf4e9e 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 4.4E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS13440 575f0424e341895cf2ee967ac5cf4e9e 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 4.4E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS13440 575f0424e341895cf2ee967ac5cf4e9e 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 4.4E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS13440 575f0424e341895cf2ee967ac5cf4e9e 447 Pfam PF11808 Domain of unknown function (DUF3329) 5 89 1.4E-17 T 23-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 RR42_RS13440 575f0424e341895cf2ee967ac5cf4e9e 447 PANTHER PTHR24423:SF554 65 429 4.8E-113 T 23-04-2016 RR42_RS13440 575f0424e341895cf2ee967ac5cf4e9e 447 SUPERFAMILY SSF47384 193 272 4.32E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS13440 575f0424e341895cf2ee967ac5cf4e9e 447 SUPERFAMILY SSF55874 261 426 1.44E-45 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS13440 575f0424e341895cf2ee967ac5cf4e9e 447 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 5.5E-136 T 23-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 RR42_RS13440 575f0424e341895cf2ee967ac5cf4e9e 447 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 427 8.8E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS13440 575f0424e341895cf2ee967ac5cf4e9e 447 SUPERFAMILY SSF55785 89 156 5.5E-6 T 23-04-2016 IPR000014 PAS domain RR42_RS13440 575f0424e341895cf2ee967ac5cf4e9e 447 PANTHER PTHR24423 65 429 4.8E-113 T 23-04-2016 RR42_RS04210 a2608081da5dfc95e671c8dd3df1c2b2 429 Gene3D G3DSA:1.20.1250.20 29 216 2.4E-28 T 23-04-2016 RR42_RS04210 a2608081da5dfc95e671c8dd3df1c2b2 429 PANTHER PTHR23512 29 386 2.8E-36 T 23-04-2016 RR42_RS04210 a2608081da5dfc95e671c8dd3df1c2b2 429 SUPERFAMILY SSF103473 22 423 1.05E-50 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS04210 a2608081da5dfc95e671c8dd3df1c2b2 429 Pfam PF07690 Major Facilitator Superfamily 37 374 2.1E-28 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS04210 a2608081da5dfc95e671c8dd3df1c2b2 429 PANTHER PTHR23512:SF1 29 386 2.8E-36 T 23-04-2016 RR42_RS20740 d8052dd1adf68797515b9edec78c9613 301 PANTHER PTHR30204:SF13 32 277 7.1E-27 T 23-04-2016 RR42_RS20740 d8052dd1adf68797515b9edec78c9613 301 PANTHER PTHR30204 32 277 7.1E-27 T 23-04-2016 RR42_RS20740 d8052dd1adf68797515b9edec78c9613 301 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 52 65 9.1E-6 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RR42_RS20740 d8052dd1adf68797515b9edec78c9613 301 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 75 95 9.1E-6 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RR42_RS20740 d8052dd1adf68797515b9edec78c9613 301 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 41 52 9.1E-6 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RR42_RS20740 d8052dd1adf68797515b9edec78c9613 301 Gene3D G3DSA:1.10.1660.10 40 112 3.0E-18 T 23-04-2016 RR42_RS20740 d8052dd1adf68797515b9edec78c9613 301 SUPERFAMILY SSF46955 40 111 2.09E-16 T 23-04-2016 IPR009061 Putative DNA-binding domain RR42_RS20740 d8052dd1adf68797515b9edec78c9613 301 SMART SM00422 40 108 8.2E-11 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RR42_RS20740 d8052dd1adf68797515b9edec78c9613 301 Pfam PF13411 MerR HTH family regulatory protein 40 107 1.6E-19 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RR42_RS14485 5fe7f47aa977d4bffa0f33c9fad8d072 483 PANTHER PTHR16943 1 483 4.8E-277 T 23-04-2016 IPR005656 MmgE/PrpD GO:0016829 RR42_RS14485 5fe7f47aa977d4bffa0f33c9fad8d072 483 Pfam PF03972 MmgE/PrpD family 17 466 8.5E-161 T 23-04-2016 IPR005656 MmgE/PrpD GO:0016829 RR42_RS14485 5fe7f47aa977d4bffa0f33c9fad8d072 483 SUPERFAMILY SSF103378 12 482 1.2E-162 T 23-04-2016 IPR005656 MmgE/PrpD GO:0016829 RR42_RS14485 5fe7f47aa977d4bffa0f33c9fad8d072 483 PANTHER PTHR16943:SF19 1 483 4.8E-277 T 23-04-2016 RR42_RS14485 5fe7f47aa977d4bffa0f33c9fad8d072 483 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 13 483 4.9E-263 T 23-04-2016 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79|UniPathway: UPA00946 RR42_RS14485 5fe7f47aa977d4bffa0f33c9fad8d072 483 Gene3D G3DSA:3.30.1330.120 287 426 1.7E-64 T 23-04-2016 RR42_RS02645 0246b485e240ec9b9cea3b8d77aaa0cd 122 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 103 120 - T 23-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site RR42_RS02645 0246b485e240ec9b9cea3b8d77aaa0cd 122 Pfam PF01521 Iron-sulphur cluster biosynthesis 19 117 1.6E-21 T 23-04-2016 IPR000361 FeS cluster biogenesis RR42_RS02645 0246b485e240ec9b9cea3b8d77aaa0cd 122 Gene3D G3DSA:2.60.300.12 13 108 1.3E-33 T 23-04-2016 IPR000361 FeS cluster biogenesis RR42_RS02645 0246b485e240ec9b9cea3b8d77aaa0cd 122 SUPERFAMILY SSF89360 15 108 5.23E-32 T 23-04-2016 IPR000361 FeS cluster biogenesis RR42_RS02645 0246b485e240ec9b9cea3b8d77aaa0cd 122 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 122 36.943 T 23-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 RR42_RS02645 0246b485e240ec9b9cea3b8d77aaa0cd 122 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 19 122 3.5E-39 T 23-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 RR42_RS02645 0246b485e240ec9b9cea3b8d77aaa0cd 122 PANTHER PTHR10072 11 122 3.7E-48 T 23-04-2016 RR42_RS03775 782c1603ffdf21c17c28acafe274e8cc 231 SUPERFAMILY SSF53955 43 230 1.38E-70 T 23-04-2016 IPR023346 Lysozyme-like domain RR42_RS03775 782c1603ffdf21c17c28acafe274e8cc 231 Gene3D G3DSA:1.10.3810.10 44 224 3.6E-69 T 23-04-2016 RR42_RS03775 782c1603ffdf21c17c28acafe274e8cc 231 PANTHER PTHR32282:SF5 49 231 7.5E-83 T 23-04-2016 RR42_RS03775 782c1603ffdf21c17c28acafe274e8cc 231 PANTHER PTHR32282 49 231 7.5E-83 T 23-04-2016 RR42_RS03775 782c1603ffdf21c17c28acafe274e8cc 231 Pfam PF00912 Transglycosylase 44 209 4.1E-62 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 RR42_RS09815 917c838cb890c82d77c0d05e9d61c488 880 SUPERFAMILY SSF55073 458 615 5.18E-49 T 23-04-2016 IPR029787 Nucleotide cyclase RR42_RS09815 917c838cb890c82d77c0d05e9d61c488 880 Gene3D G3DSA:3.30.70.270 455 618 2.5E-57 T 23-04-2016 RR42_RS09815 917c838cb890c82d77c0d05e9d61c488 880 Pfam PF00563 EAL domain 630 866 6.4E-73 T 23-04-2016 IPR001633 EAL domain RR42_RS09815 917c838cb890c82d77c0d05e9d61c488 880 SMART SM00267 442 614 5.9E-68 T 23-04-2016 IPR000160 GGDEF domain RR42_RS09815 917c838cb890c82d77c0d05e9d61c488 880 Pfam PF13426 PAS domain 339 441 9.7E-11 T 23-04-2016 IPR000014 PAS domain RR42_RS09815 917c838cb890c82d77c0d05e9d61c488 880 Gene3D G3DSA:3.30.450.20 111 190 7.7E-9 T 23-04-2016 RR42_RS09815 917c838cb890c82d77c0d05e9d61c488 880 Gene3D G3DSA:3.20.20.450 627 877 1.1E-92 T 23-04-2016 IPR001633 EAL domain RR42_RS09815 917c838cb890c82d77c0d05e9d61c488 880 SUPERFAMILY SSF55785 339 450 4.03E-19 T 23-04-2016 IPR000014 PAS domain RR42_RS09815 917c838cb890c82d77c0d05e9d61c488 880 SMART SM00052 624 871 2.6E-102 T 23-04-2016 IPR001633 EAL domain RR42_RS09815 917c838cb890c82d77c0d05e9d61c488 880 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 332 447 4.0E-18 T 23-04-2016 IPR000014 PAS domain RR42_RS09815 917c838cb890c82d77c0d05e9d61c488 880 Pfam PF00990 Diguanylate cyclase, GGDEF domain 453 610 1.1E-48 T 23-04-2016 IPR000160 GGDEF domain RR42_RS09815 917c838cb890c82d77c0d05e9d61c488 880 SMART SM00091 328 394 3.2E-6 T 23-04-2016 IPR000014 PAS domain RR42_RS09815 917c838cb890c82d77c0d05e9d61c488 880 PANTHER PTHR10799 310 724 1.5E-79 T 23-04-2016 RR42_RS09815 917c838cb890c82d77c0d05e9d61c488 880 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 450 613 1.8E-44 T 23-04-2016 IPR000160 GGDEF domain RR42_RS09815 917c838cb890c82d77c0d05e9d61c488 880 PANTHER PTHR10799:SF774 310 724 1.5E-79 T 23-04-2016 RR42_RS09815 917c838cb890c82d77c0d05e9d61c488 880 Gene3D G3DSA:3.30.450.20 321 440 1.3E-17 T 23-04-2016 RR42_RS09815 917c838cb890c82d77c0d05e9d61c488 880 SUPERFAMILY SSF141868 630 877 1.96E-85 T 23-04-2016 IPR001633 EAL domain RR42_RS17440 a4ae15241ca660f9faaf2fd3a9f63805 193 PANTHER PTHR34406 1 193 1.1E-30 T 23-04-2016 RR42_RS17440 a4ae15241ca660f9faaf2fd3a9f63805 193 SUPERFAMILY SSF101874 25 192 3.92E-43 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RR42_RS17440 a4ae15241ca660f9faaf2fd3a9f63805 193 PANTHER PTHR34406:SF1 1 193 1.1E-30 T 23-04-2016 RR42_RS17440 a4ae15241ca660f9faaf2fd3a9f63805 193 Pfam PF04264 YceI-like domain 26 188 2.3E-31 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RR42_RS17440 a4ae15241ca660f9faaf2fd3a9f63805 193 SMART SM00867 25 190 4.8E-56 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RR42_RS17440 a4ae15241ca660f9faaf2fd3a9f63805 193 Gene3D G3DSA:2.40.128.110 25 192 1.1E-44 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RR42_RS08835 b302329d06a4f4059204422ef1725077 530 Pfam PF02954 Bacterial regulatory protein, Fis family 471 503 1.3E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS08835 b302329d06a4f4059204422ef1725077 530 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 398 407 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RR42_RS08835 b302329d06a4f4059204422ef1725077 530 Gene3D G3DSA:3.40.50.300 183 357 3.1E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS08835 b302329d06a4f4059204422ef1725077 530 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 271 286 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RR42_RS08835 b302329d06a4f4059204422ef1725077 530 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 492 512 8.4E-6 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS08835 b302329d06a4f4059204422ef1725077 530 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 475 492 8.4E-6 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS08835 b302329d06a4f4059204422ef1725077 530 Pfam PF00158 Sigma-54 interaction domain 185 351 4.5E-67 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RR42_RS08835 b302329d06a4f4059204422ef1725077 530 Gene3D G3DSA:1.10.8.60 358 405 1.4E-17 T 23-04-2016 RR42_RS08835 b302329d06a4f4059204422ef1725077 530 SUPERFAMILY SSF52540 184 426 1.59E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS08835 b302329d06a4f4059204422ef1725077 530 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 209 222 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RR42_RS08835 b302329d06a4f4059204422ef1725077 530 SUPERFAMILY SSF46689 459 511 1.88E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS08835 b302329d06a4f4059204422ef1725077 530 SMART SM00065 15 164 8.5E-5 T 23-04-2016 IPR003018 GAF domain GO:0005515 RR42_RS08835 b302329d06a4f4059204422ef1725077 530 PANTHER PTHR32071 167 522 1.8E-161 T 23-04-2016 RR42_RS08835 b302329d06a4f4059204422ef1725077 530 SMART SM00382 205 348 2.3E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS08835 b302329d06a4f4059204422ef1725077 530 Gene3D G3DSA:1.10.10.60 406 511 2.4E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS08835 b302329d06a4f4059204422ef1725077 530 Gene3D G3DSA:3.30.450.40 19 166 2.1E-11 T 23-04-2016 IPR029016 GAF domain-like RR42_RS08835 b302329d06a4f4059204422ef1725077 530 PANTHER PTHR32071:SF35 167 522 1.8E-161 T 23-04-2016 RR42_RS08835 b302329d06a4f4059204422ef1725077 530 SUPERFAMILY SSF55781 20 167 3.05E-12 T 23-04-2016 IPR029016 GAF domain-like RR42_RS04290 72abef9f217ae1e5e54a94c41795eb15 184 PANTHER PTHR30529:SF3 6 182 2.5E-47 T 23-04-2016 RR42_RS04290 72abef9f217ae1e5e54a94c41795eb15 184 Pfam PF01292 Prokaryotic cytochrome b561 13 183 3.2E-24 T 23-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RR42_RS04290 72abef9f217ae1e5e54a94c41795eb15 184 PANTHER PTHR30529 6 182 2.5E-47 T 23-04-2016 RR42_RS04290 72abef9f217ae1e5e54a94c41795eb15 184 SUPERFAMILY SSF81342 8 183 1.18E-29 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RR42_RS16265 c1b5608dbd5dc76e99e9dbef535a050f 193 Pfam PF06073 Bacterial protein of unknown function (DUF934) 74 180 3.6E-42 T 23-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 RR42_RS16265 c1b5608dbd5dc76e99e9dbef535a050f 193 PIRSF PIRSF030820 1 188 3.6E-56 T 23-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 RR42_RS11885 1414d94cce8a6ec475a5c8c6f909150d 861 SUPERFAMILY SSF81301 41 157 8.03E-21 T 23-04-2016 RR42_RS11885 1414d94cce8a6ec475a5c8c6f909150d 861 SUPERFAMILY SSF81593 169 297 2.2E-10 T 23-04-2016 RR42_RS11885 1414d94cce8a6ec475a5c8c6f909150d 861 PANTHER PTHR13734:SF45 99 673 2.3E-91 T 23-04-2016 RR42_RS11885 1414d94cce8a6ec475a5c8c6f909150d 861 Gene3D G3DSA:3.30.70.260 788 852 1.7E-12 T 23-04-2016 RR42_RS11885 1414d94cce8a6ec475a5c8c6f909150d 861 Gene3D G3DSA:3.30.70.260 676 729 7.4E-4 T 23-04-2016 RR42_RS11885 1414d94cce8a6ec475a5c8c6f909150d 861 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 861 325.834 T 23-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 RR42_RS11885 1414d94cce8a6ec475a5c8c6f909150d 861 SUPERFAMILY SSF109604 408 559 5.57E-16 T 23-04-2016 RR42_RS11885 1414d94cce8a6ec475a5c8c6f909150d 861 SMART SM00471 437 584 3.1E-5 T 23-04-2016 IPR003607 HD/PDEase domain RR42_RS11885 1414d94cce8a6ec475a5c8c6f909150d 861 SUPERFAMILY SSF55021 788 841 7.91E-10 T 23-04-2016 RR42_RS11885 1414d94cce8a6ec475a5c8c6f909150d 861 Gene3D G3DSA:3.30.460.10 62 155 3.3E-8 T 23-04-2016 RR42_RS11885 1414d94cce8a6ec475a5c8c6f909150d 861 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 28 859 5.1E-236 T 23-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 RR42_RS11885 1414d94cce8a6ec475a5c8c6f909150d 861 Gene3D G3DSA:1.10.3210.10 411 598 4.3E-24 T 23-04-2016 IPR006674 HD domain RR42_RS11885 1414d94cce8a6ec475a5c8c6f909150d 861 Pfam PF01909 Nucleotidyltransferase domain 58 104 7.9E-6 T 23-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 RR42_RS11885 1414d94cce8a6ec475a5c8c6f909150d 861 PANTHER PTHR13734 99 673 2.3E-91 T 23-04-2016 RR42_RS11885 1414d94cce8a6ec475a5c8c6f909150d 861 Pfam PF01966 HD domain 442 547 8.4E-10 T 23-04-2016 IPR006674 HD domain RR42_RS11885 1414d94cce8a6ec475a5c8c6f909150d 861 SUPERFAMILY SSF55021 676 746 4.58E-9 T 23-04-2016 RR42_RS11885 1414d94cce8a6ec475a5c8c6f909150d 861 PIRSF PIRSF006288 2 861 0.0 T 23-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 RR42_RS11885 1414d94cce8a6ec475a5c8c6f909150d 861 Pfam PF08335 GlnD PII-uridylyltransferase 166 302 9.7E-33 T 23-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RR42_RS17570 4e64f6d895220ef28a585f378334271c 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.4E-46 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RR42_RS17570 4e64f6d895220ef28a585f378334271c 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 1.4E-46 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RR42_RS17570 4e64f6d895220ef28a585f378334271c 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 163 1.4E-46 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RR42_RS17570 4e64f6d895220ef28a585f378334271c 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.4E-46 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RR42_RS17570 4e64f6d895220ef28a585f378334271c 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 172 188 1.4E-46 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RR42_RS17570 4e64f6d895220ef28a585f378334271c 332 SUPERFAMILY SSF55347 150 313 1.43E-73 T 23-04-2016 RR42_RS17570 4e64f6d895220ef28a585f378334271c 332 PANTHER PTHR10836:SF31 1 332 8.0E-229 T 23-04-2016 RR42_RS17570 4e64f6d895220ef28a585f378334271c 332 Gene3D G3DSA:3.40.50.720 2 159 3.0E-78 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS17570 4e64f6d895220ef28a585f378334271c 332 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 151 6.9E-61 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 RR42_RS17570 4e64f6d895220ef28a585f378334271c 332 PANTHER PTHR10836 1 332 8.0E-229 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RR42_RS17570 4e64f6d895220ef28a585f378334271c 332 PIRSF PIRSF000149 1 332 7.9E-131 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RR42_RS17570 4e64f6d895220ef28a585f378334271c 332 Gene3D G3DSA:3.30.360.10 160 315 5.8E-81 T 23-04-2016 RR42_RS17570 4e64f6d895220ef28a585f378334271c 332 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 149 156 - T 23-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 RR42_RS17570 4e64f6d895220ef28a585f378334271c 332 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 1.1E-133 T 23-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS17570 4e64f6d895220ef28a585f378334271c 332 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 156 313 2.8E-66 T 23-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 RR42_RS17570 4e64f6d895220ef28a585f378334271c 332 SMART SM00846 3 151 4.7E-98 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 RR42_RS17570 4e64f6d895220ef28a585f378334271c 332 SUPERFAMILY SSF51735 3 167 3.77E-67 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS19135 a775a701f8a0651fa79d112805a552c5 133 SUPERFAMILY SSF53137 18 133 1.57E-47 T 23-04-2016 RR42_RS19135 a775a701f8a0651fa79d112805a552c5 133 Pfam PF00411 Ribosomal protein S11 23 132 1.4E-51 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RR42_RS19135 a775a701f8a0651fa79d112805a552c5 133 Gene3D G3DSA:3.30.420.80 10 133 2.5E-54 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RR42_RS19135 a775a701f8a0651fa79d112805a552c5 133 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 133 33.025 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RR42_RS19135 a775a701f8a0651fa79d112805a552c5 133 PANTHER PTHR11759 15 133 5.4E-69 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RR42_RS19135 a775a701f8a0651fa79d112805a552c5 133 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 14 130 1.2E-55 T 23-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19135 a775a701f8a0651fa79d112805a552c5 133 PIRSF PIRSF002131 2 133 1.0E-52 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RR42_RS19135 a775a701f8a0651fa79d112805a552c5 133 ProSitePatterns PS00054 Ribosomal protein S11 signature. 101 123 - T 23-04-2016 IPR018102 Ribosomal S11, conserved site RR42_RS12945 29e5b68d3bd1364cff8cd8bfd559c4a6 531 Pfam PF00916 Sulfate permease family 1 339 4.4E-59 T 23-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 RR42_RS12945 29e5b68d3bd1364cff8cd8bfd559c4a6 531 Pfam PF01740 STAS domain 414 504 1.7E-8 T 23-04-2016 IPR002645 STAS domain RR42_RS12945 29e5b68d3bd1364cff8cd8bfd559c4a6 531 PANTHER PTHR11814 1 527 1.2E-100 T 23-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 RR42_RS12945 29e5b68d3bd1364cff8cd8bfd559c4a6 531 Gene3D G3DSA:3.30.750.24 415 504 1.6E-8 T 23-04-2016 IPR002645 STAS domain RR42_RS12945 29e5b68d3bd1364cff8cd8bfd559c4a6 531 SUPERFAMILY SSF52091 416 505 1.49E-8 T 23-04-2016 IPR002645 STAS domain RR42_RS11480 eeccbec13b5dccc7487b6ebce5e386d8 112 Gene3D G3DSA:1.10.760.10 31 111 4.4E-30 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS11480 eeccbec13b5dccc7487b6ebce5e386d8 112 SUPERFAMILY SSF46626 34 110 7.17E-17 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS11480 eeccbec13b5dccc7487b6ebce5e386d8 112 PRINTS PR00606 Class ID cytochrome C signature 73 86 6.4E-20 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RR42_RS11480 eeccbec13b5dccc7487b6ebce5e386d8 112 PRINTS PR00606 Class ID cytochrome C signature 100 110 6.4E-20 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RR42_RS11480 eeccbec13b5dccc7487b6ebce5e386d8 112 PRINTS PR00606 Class ID cytochrome C signature 50 63 6.4E-20 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RR42_RS11480 eeccbec13b5dccc7487b6ebce5e386d8 112 PRINTS PR00606 Class ID cytochrome C signature 88 98 6.4E-20 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RR42_RS11480 eeccbec13b5dccc7487b6ebce5e386d8 112 PRINTS PR00606 Class ID cytochrome C signature 35 48 6.4E-20 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RR42_RS11480 eeccbec13b5dccc7487b6ebce5e386d8 112 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 33 108 1.0E-6 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS09865 c739b3de2e32afffce6d6baf6912ce15 681 PANTHER PTHR34216:SF2 29 303 3.9E-99 T 23-04-2016 RR42_RS09865 c739b3de2e32afffce6d6baf6912ce15 681 PANTHER PTHR34216:SF2 470 651 3.9E-99 T 23-04-2016 RR42_RS09865 c739b3de2e32afffce6d6baf6912ce15 681 Gene3D G3DSA:3.20.20.370 74 333 2.2E-26 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RR42_RS09865 c739b3de2e32afffce6d6baf6912ce15 681 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 324 648 1.7E-107 T 23-04-2016 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal KEGG: 00240+3.5.1.-|KEGG: 00260+3.5.1.-|KEGG: 00332+3.5.1.-|KEGG: 00364+3.5.1.-|KEGG: 00480+3.5.1.-|KEGG: 00520+3.5.1.-|KEGG: 00600+3.5.1.-|KEGG: 00760+3.5.1.-|KEGG: 00930+3.5.1.- RR42_RS09865 c739b3de2e32afffce6d6baf6912ce15 681 SUPERFAMILY SSF88713 66 195 9.64E-33 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RR42_RS09865 c739b3de2e32afffce6d6baf6912ce15 681 SUPERFAMILY SSF88713 223 269 9.64E-33 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RR42_RS09865 c739b3de2e32afffce6d6baf6912ce15 681 SUPERFAMILY SSF88713 320 363 9.64E-33 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RR42_RS09865 c739b3de2e32afffce6d6baf6912ce15 681 PANTHER PTHR34216 29 303 3.9E-99 T 23-04-2016 RR42_RS09865 c739b3de2e32afffce6d6baf6912ce15 681 PANTHER PTHR34216 470 651 3.9E-99 T 23-04-2016 RR42_RS09865 c739b3de2e32afffce6d6baf6912ce15 681 Pfam PF01522 Polysaccharide deacetylase 102 269 1.5E-25 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RR42_RS09865 c739b3de2e32afffce6d6baf6912ce15 681 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 42 669 2.4E-225 T 23-04-2016 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0042710 KEGG: 00240+3.5.1.-|KEGG: 00260+3.5.1.-|KEGG: 00332+3.5.1.-|KEGG: 00364+3.5.1.-|KEGG: 00480+3.5.1.-|KEGG: 00520+3.5.1.-|KEGG: 00600+3.5.1.-|KEGG: 00760+3.5.1.-|KEGG: 00930+3.5.1.- RR42_RS20620 9ed32c38bb68824c71161bd1e7e810f8 310 PIRSF PIRSF017082 1 310 2.3E-90 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS20620 9ed32c38bb68824c71161bd1e7e810f8 310 Gene3D G3DSA:3.40.190.10 114 263 3.1E-5 T 23-04-2016 RR42_RS20620 9ed32c38bb68824c71161bd1e7e810f8 310 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 307 1.1E-35 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS20620 9ed32c38bb68824c71161bd1e7e810f8 310 PANTHER PTHR30349 1 274 5.6E-88 T 23-04-2016 RR42_RS20620 9ed32c38bb68824c71161bd1e7e810f8 310 SUPERFAMILY SSF53850 83 266 1.32E-9 T 23-04-2016 RR42_RS20620 9ed32c38bb68824c71161bd1e7e810f8 310 PANTHER PTHR30349:SF25 1 274 5.6E-88 T 23-04-2016 RR42_RS09465 3e8d0679fe5327a164f291e7fbf620ce 325 PANTHER PTHR10996 1 323 1.4E-115 T 23-04-2016 RR42_RS09465 3e8d0679fe5327a164f291e7fbf620ce 325 SUPERFAMILY SSF52283 1 132 4.73E-29 T 23-04-2016 RR42_RS09465 3e8d0679fe5327a164f291e7fbf620ce 325 Gene3D G3DSA:3.40.50.720 115 290 2.1E-65 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS09465 3e8d0679fe5327a164f291e7fbf620ce 325 Gene3D G3DSA:3.40.50.720 4 114 1.3E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS09465 3e8d0679fe5327a164f291e7fbf620ce 325 SUPERFAMILY SSF51735 100 288 5.01E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS09465 3e8d0679fe5327a164f291e7fbf620ce 325 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 6.5E-57 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RR42_RS09465 3e8d0679fe5327a164f291e7fbf620ce 325 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 317 4.7E-26 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 PIRSF PIRSF036643 15 948 0.0 T 23-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 Pfam PF00384 Molybdopterin oxidoreductase 294 712 3.5E-73 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 101 140 4.4E-17 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 SMART SM00926 237 291 6.4E-14 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 210 221 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 Pfam PF01568 Molydopterin dinucleotide binding domain 809 913 3.4E-29 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 Pfam PF00037 4Fe-4S binding domain 208 223 3.0E-5 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 SUPERFAMILY SSF54862 93 229 3.01E-37 T 23-04-2016 RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 167 178 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 847 874 - T 23-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 239 288 4.9E-14 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 Gene3D G3DSA:2.40.40.20 767 920 4.2E-42 T 23-04-2016 RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 SUPERFAMILY SSF54292 19 92 3.99E-18 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 Gene3D G3DSA:3.30.70.20 150 216 6.3E-15 T 23-04-2016 RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 Gene3D G3DSA:2.20.25.90 251 292 2.5E-17 T 23-04-2016 RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 PANTHER PTHR11615:SF112 236 937 3.5E-241 T 23-04-2016 RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 18 94 1.5E-23 T 23-04-2016 RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 242 917 1.0E-280 T 23-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 SMART SM00929 101 141 1.8E-18 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 Gene3D G3DSA:3.10.20.30 13 72 2.3E-8 T 23-04-2016 IPR012675 Beta-grasp domain RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 Gene3D G3DSA:3.40.50.740 294 371 3.3E-84 T 23-04-2016 RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 Gene3D G3DSA:3.40.50.740 564 766 3.3E-84 T 23-04-2016 RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 SUPERFAMILY SSF50692 764 919 1.49E-42 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 SUPERFAMILY SSF53706 239 760 1.31E-187 T 23-04-2016 RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 Gene3D G3DSA:3.30.70.20 217 250 1.8E-4 T 23-04-2016 RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 PANTHER PTHR11615 21 69 3.5E-241 T 23-04-2016 RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 PANTHER PTHR11615 236 937 3.5E-241 T 23-04-2016 RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 PANTHER PTHR11615:SF112 21 69 3.5E-241 T 23-04-2016 RR42_RS03760 7a11269acfc4710f8c1de92e76d73b49 951 Gene3D G3DSA:3.40.228.10 372 563 1.3E-55 T 23-04-2016 RR42_RS36315 8bd308f04d811a3b8682d1c3ec189e04 228 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 1 227 1.9E-58 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS36315 8bd308f04d811a3b8682d1c3ec189e04 228 SUPERFAMILY SSF53850 36 202 2.09E-7 T 23-04-2016 RR42_RS36315 8bd308f04d811a3b8682d1c3ec189e04 228 PANTHER PTHR30349:SF1 1 207 2.6E-41 T 23-04-2016 RR42_RS36315 8bd308f04d811a3b8682d1c3ec189e04 228 PANTHER PTHR30349 1 207 2.6E-41 T 23-04-2016 RR42_RS05495 7001f219bbcdf6f38a248e08b14786ee 234 SUPERFAMILY SSF51351 1 232 2.75E-81 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RR42_RS05495 7001f219bbcdf6f38a248e08b14786ee 234 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 1 234 34.312 T 23-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RR42_RS05495 7001f219bbcdf6f38a248e08b14786ee 234 Pfam PF00121 Triosephosphate isomerase 1 231 9.5E-79 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RR42_RS05495 7001f219bbcdf6f38a248e08b14786ee 234 ProSitePatterns PS00171 Triosephosphate isomerase active site. 151 161 - T 23-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RR42_RS05495 7001f219bbcdf6f38a248e08b14786ee 234 Gene3D G3DSA:3.20.20.70 1 233 1.9E-90 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS05495 7001f219bbcdf6f38a248e08b14786ee 234 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 11 226 4.0E-54 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RR42_RS05495 7001f219bbcdf6f38a248e08b14786ee 234 PANTHER PTHR21139 1 234 2.3E-104 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RR42_RS18295 e3fd0e16577cb4470e6a65b8b924f2db 505 PRINTS PR00095 Anthranilate synthase component I signature 428 442 1.2E-23 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RR42_RS18295 e3fd0e16577cb4470e6a65b8b924f2db 505 PRINTS PR00095 Anthranilate synthase component I signature 443 457 1.2E-23 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RR42_RS18295 e3fd0e16577cb4470e6a65b8b924f2db 505 PRINTS PR00095 Anthranilate synthase component I signature 348 361 1.2E-23 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RR42_RS18295 e3fd0e16577cb4470e6a65b8b924f2db 505 PRINTS PR00095 Anthranilate synthase component I signature 334 347 1.2E-23 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RR42_RS18295 e3fd0e16577cb4470e6a65b8b924f2db 505 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 25 494 4.1E-164 T 23-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RR42_RS18295 e3fd0e16577cb4470e6a65b8b924f2db 505 Pfam PF00425 chorismate binding enzyme 221 486 1.8E-93 T 23-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal RR42_RS18295 e3fd0e16577cb4470e6a65b8b924f2db 505 PANTHER PTHR11236 5 499 3.3E-217 T 23-04-2016 RR42_RS18295 e3fd0e16577cb4470e6a65b8b924f2db 505 PANTHER PTHR11236:SF9 5 499 3.3E-217 T 23-04-2016 RR42_RS18295 e3fd0e16577cb4470e6a65b8b924f2db 505 Gene3D G3DSA:3.60.120.10 12 498 4.8E-175 T 23-04-2016 IPR005801 ADC synthase GO:0009058 RR42_RS18295 e3fd0e16577cb4470e6a65b8b924f2db 505 SUPERFAMILY SSF56322 14 494 3.4E-154 T 23-04-2016 IPR005801 ADC synthase GO:0009058 RR42_RS18295 e3fd0e16577cb4470e6a65b8b924f2db 505 Pfam PF04715 Anthranilate synthase component I, N terminal region 26 172 5.4E-36 T 23-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RR42_RS02670 64d5f1cc7c02ee00cfb0ba305c73cdb1 413 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 60 70 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS02670 64d5f1cc7c02ee00cfb0ba305c73cdb1 413 Gene3D G3DSA:3.40.50.620 23 245 2.3E-79 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS02670 64d5f1cc7c02ee00cfb0ba305c73cdb1 413 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 23 411 4.4E-116 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RR42_RS02670 64d5f1cc7c02ee00cfb0ba305c73cdb1 413 Gene3D G3DSA:3.10.290.10 343 412 9.3E-25 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RR42_RS02670 64d5f1cc7c02ee00cfb0ba305c73cdb1 413 SUPERFAMILY SSF52374 22 330 9.38E-89 T 23-04-2016 RR42_RS02670 64d5f1cc7c02ee00cfb0ba305c73cdb1 413 SMART SM00363 352 413 2.4E-4 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RR42_RS02670 64d5f1cc7c02ee00cfb0ba305c73cdb1 413 Pfam PF00579 tRNA synthetases class I (W and Y) 51 331 1.1E-73 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS02670 64d5f1cc7c02ee00cfb0ba305c73cdb1 413 PANTHER PTHR11766:SF1 18 412 1.6E-219 T 23-04-2016 RR42_RS02670 64d5f1cc7c02ee00cfb0ba305c73cdb1 413 Gene3D G3DSA:1.10.240.10 246 342 3.6E-33 T 23-04-2016 RR42_RS02670 64d5f1cc7c02ee00cfb0ba305c73cdb1 413 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 64 86 4.9E-26 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RR42_RS02670 64d5f1cc7c02ee00cfb0ba305c73cdb1 413 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 179 194 4.9E-26 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RR42_RS02670 64d5f1cc7c02ee00cfb0ba305c73cdb1 413 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 229 241 4.9E-26 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RR42_RS02670 64d5f1cc7c02ee00cfb0ba305c73cdb1 413 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 196 218 4.9E-26 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RR42_RS02670 64d5f1cc7c02ee00cfb0ba305c73cdb1 413 SUPERFAMILY SSF55174 334 409 7.85E-19 T 23-04-2016 RR42_RS02670 64d5f1cc7c02ee00cfb0ba305c73cdb1 413 PANTHER PTHR11766 18 412 1.6E-219 T 23-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 RR42_RS02670 64d5f1cc7c02ee00cfb0ba305c73cdb1 413 Pfam PF13275 S4 domain 349 400 6.9E-7 T 23-04-2016 RR42_RS02670 64d5f1cc7c02ee00cfb0ba305c73cdb1 413 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 16 412 46.969 T 23-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 RR42_RS07675 cfcba17c092f26e8c6d76ff8dfac88e8 477 PANTHER PTHR10342:SF199 21 474 3.2E-140 T 23-04-2016 RR42_RS07675 cfcba17c092f26e8c6d76ff8dfac88e8 477 SUPERFAMILY SSF53649 27 463 2.76E-124 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RR42_RS07675 cfcba17c092f26e8c6d76ff8dfac88e8 477 Gene3D G3DSA:3.40.720.10 28 382 1.0E-108 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RR42_RS07675 cfcba17c092f26e8c6d76ff8dfac88e8 477 Pfam PF00884 Sulfatase 31 362 1.4E-83 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RR42_RS07675 cfcba17c092f26e8c6d76ff8dfac88e8 477 ProSitePatterns PS00149 Sulfatases signature 2. 127 137 - T 23-04-2016 IPR024607 Sulfatase, conserved site RR42_RS07675 cfcba17c092f26e8c6d76ff8dfac88e8 477 PANTHER PTHR10342 21 474 3.2E-140 T 23-04-2016 RR42_RS07675 cfcba17c092f26e8c6d76ff8dfac88e8 477 Gene3D G3DSA:3.30.1120.10 386 460 3.5E-16 T 23-04-2016 RR42_RS19990 50891a09053912efbf1a4cd29989595a 460 SUPERFAMILY SSF47384 219 300 2.75E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS19990 50891a09053912efbf1a4cd29989595a 460 PANTHER PTHR24423:SF474 6 21 7.0E-57 T 23-04-2016 RR42_RS19990 50891a09053912efbf1a4cd29989595a 460 PANTHER PTHR24423:SF474 177 459 7.0E-57 T 23-04-2016 RR42_RS19990 50891a09053912efbf1a4cd29989595a 460 Pfam PF08521 Two-component sensor kinase N-terminal 17 158 8.0E-38 T 23-04-2016 IPR013727 Two-component sensor kinase, N-terminal RR42_RS19990 50891a09053912efbf1a4cd29989595a 460 SUPERFAMILY SSF55874 313 458 5.63E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS19990 50891a09053912efbf1a4cd29989595a 460 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 300 2.3E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS19990 50891a09053912efbf1a4cd29989595a 460 SMART SM00388 236 301 9.3E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS19990 50891a09053912efbf1a4cd29989595a 460 Gene3D G3DSA:3.30.565.10 312 459 3.4E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS19990 50891a09053912efbf1a4cd29989595a 460 SMART SM00387 350 460 8.9E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS19990 50891a09053912efbf1a4cd29989595a 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 415 6.96E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS19990 50891a09053912efbf1a4cd29989595a 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 457 6.96E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS19990 50891a09053912efbf1a4cd29989595a 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 6.96E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS19990 50891a09053912efbf1a4cd29989595a 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 401 6.96E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS19990 50891a09053912efbf1a4cd29989595a 460 PANTHER PTHR24423 6 21 7.0E-57 T 23-04-2016 RR42_RS19990 50891a09053912efbf1a4cd29989595a 460 PANTHER PTHR24423 177 459 7.0E-57 T 23-04-2016 RR42_RS19990 50891a09053912efbf1a4cd29989595a 460 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 358 459 1.6E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS19990 50891a09053912efbf1a4cd29989595a 460 Gene3D G3DSA:1.10.287.130 228 296 1.7E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS06625 f576750a5490460941836151521a76dc 815 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 808 43.218 T 23-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RR42_RS06625 f576750a5490460941836151521a76dc 815 Pfam PF03484 tRNA synthetase B5 domain 411 480 1.3E-18 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 RR42_RS06625 f576750a5490460941836151521a76dc 815 Pfam PF03483 B3/4 domain 220 392 7.1E-62 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 RR42_RS06625 f576750a5490460941836151521a76dc 815 SMART SM00873 219 392 5.4E-82 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 RR42_RS06625 f576750a5490460941836151521a76dc 815 PANTHER PTHR10947:SF0 2 814 1.8E-255 T 23-04-2016 RR42_RS06625 f576750a5490460941836151521a76dc 815 PANTHER PTHR10947 2 814 1.8E-255 T 23-04-2016 RR42_RS06625 f576750a5490460941836151521a76dc 815 Gene3D G3DSA:2.40.50.140 43 161 1.1E-43 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS06625 f576750a5490460941836151521a76dc 815 Gene3D G3DSA:3.30.930.10 499 701 1.4E-60 T 23-04-2016 RR42_RS06625 f576750a5490460941836151521a76dc 815 SMART SM00874 408 480 3.1E-27 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 RR42_RS06625 f576750a5490460941836151521a76dc 815 SUPERFAMILY SSF54991 708 814 2.09E-19 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RR42_RS06625 f576750a5490460941836151521a76dc 815 SUPERFAMILY SSF56037 202 398 2.88E-69 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RR42_RS06625 f576750a5490460941836151521a76dc 815 SUPERFAMILY SSF46955 408 484 3.02E-17 T 23-04-2016 IPR009061 Putative DNA-binding domain RR42_RS06625 f576750a5490460941836151521a76dc 815 Gene3D G3DSA:3.30.70.380 714 814 3.6E-23 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RR42_RS06625 f576750a5490460941836151521a76dc 815 Gene3D G3DSA:3.30.56.20 407 484 1.3E-23 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 RR42_RS06625 f576750a5490460941836151521a76dc 815 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 814 4.4E-226 T 23-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RR42_RS06625 f576750a5490460941836151521a76dc 815 SMART SM00896 712 814 1.3E-30 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RR42_RS06625 f576750a5490460941836151521a76dc 815 SUPERFAMILY SSF50249 37 204 3.67E-48 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS06625 f576750a5490460941836151521a76dc 815 Gene3D G3DSA:3.30.56.10 1 39 2.2E-23 T 23-04-2016 RR42_RS06625 f576750a5490460941836151521a76dc 815 Gene3D G3DSA:3.30.56.10 162 191 2.2E-23 T 23-04-2016 RR42_RS06625 f576750a5490460941836151521a76dc 815 Pfam PF01588 Putative tRNA binding domain 46 152 3.4E-22 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 RR42_RS06625 f576750a5490460941836151521a76dc 815 Pfam PF03147 Ferredoxin-fold anticodon binding domain 712 814 8.3E-21 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RR42_RS06625 f576750a5490460941836151521a76dc 815 SUPERFAMILY SSF55681 476 701 3.43E-49 T 23-04-2016 RR42_RS06625 f576750a5490460941836151521a76dc 815 Gene3D G3DSA:3.50.40.10 205 398 4.3E-77 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RR42_RS01620 0661f99389443f3d7183a5f8e5a67e9e 222 SMART SM00100 11 132 1.5E-10 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain RR42_RS01620 0661f99389443f3d7183a5f8e5a67e9e 222 SUPERFAMILY SSF51206 4 137 2.88E-28 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like RR42_RS01620 0661f99389443f3d7183a5f8e5a67e9e 222 PANTHER PTHR24567:SF30 11 219 2.4E-32 T 23-04-2016 RR42_RS01620 0661f99389443f3d7183a5f8e5a67e9e 222 SMART SM00419 165 213 2.6E-4 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RR42_RS01620 0661f99389443f3d7183a5f8e5a67e9e 222 Pfam PF00027 Cyclic nucleotide-binding domain 30 116 1.5E-18 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain RR42_RS01620 0661f99389443f3d7183a5f8e5a67e9e 222 PANTHER PTHR24567 11 219 2.4E-32 T 23-04-2016 RR42_RS01620 0661f99389443f3d7183a5f8e5a67e9e 222 Gene3D G3DSA:2.60.120.10 8 137 3.8E-26 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS01620 0661f99389443f3d7183a5f8e5a67e9e 222 Gene3D G3DSA:1.10.10.10 147 220 2.7E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS01620 0661f99389443f3d7183a5f8e5a67e9e 222 Pfam PF13545 Crp-like helix-turn-helix domain 150 220 2.1E-11 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RR42_RS01620 0661f99389443f3d7183a5f8e5a67e9e 222 SUPERFAMILY SSF46785 147 221 2.34E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS09265 16fb599cd54a79fc37c02865e8bb618b 568 Pfam PF00753 Metallo-beta-lactamase superfamily 314 480 1.2E-17 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS09265 16fb599cd54a79fc37c02865e8bb618b 568 SMART SM00849 314 480 8.6E-31 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS09265 16fb599cd54a79fc37c02865e8bb618b 568 PANTHER PTHR23131 294 555 5.4E-60 T 23-04-2016 RR42_RS09265 16fb599cd54a79fc37c02865e8bb618b 568 Gene3D G3DSA:3.90.79.10 8 209 1.2E-17 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RR42_RS09265 16fb599cd54a79fc37c02865e8bb618b 568 Pfam PF00293 NUDIX domain 19 106 4.6E-6 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RR42_RS09265 16fb599cd54a79fc37c02865e8bb618b 568 SUPERFAMILY SSF56281 293 553 1.12E-54 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS09265 16fb599cd54a79fc37c02865e8bb618b 568 SUPERFAMILY SSF55811 14 106 4.56E-16 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RR42_RS09265 16fb599cd54a79fc37c02865e8bb618b 568 SUPERFAMILY SSF55811 153 210 4.56E-16 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RR42_RS09265 16fb599cd54a79fc37c02865e8bb618b 568 Gene3D G3DSA:3.60.15.10 290 507 7.8E-49 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS11295 8c089496a591c5130ef3e16563a228f5 235 PANTHER PTHR11751 11 115 2.2E-24 T 23-04-2016 RR42_RS11295 8c089496a591c5130ef3e16563a228f5 235 Pfam PF07729 FCD domain 101 225 7.7E-21 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS11295 8c089496a591c5130ef3e16563a228f5 235 Gene3D G3DSA:1.10.10.10 9 81 2.8E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS11295 8c089496a591c5130ef3e16563a228f5 235 SUPERFAMILY SSF48008 96 232 9.94E-26 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS11295 8c089496a591c5130ef3e16563a228f5 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 77 2.6E-20 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS11295 8c089496a591c5130ef3e16563a228f5 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 5.8E-11 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS11295 8c089496a591c5130ef3e16563a228f5 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 5.8E-11 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS11295 8c089496a591c5130ef3e16563a228f5 235 SMART SM00345 18 77 4.2E-20 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS11295 8c089496a591c5130ef3e16563a228f5 235 SUPERFAMILY SSF46785 8 81 4.52E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS11295 8c089496a591c5130ef3e16563a228f5 235 Gene3D G3DSA:1.20.120.530 94 232 5.2E-27 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS11295 8c089496a591c5130ef3e16563a228f5 235 SMART SM00895 99 226 5.8E-19 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS20800 133bcb59b0c5006f1130b079723a0bad 276 PANTHER PTHR40055:SF1 28 276 3.8E-34 T 23-04-2016 RR42_RS20800 133bcb59b0c5006f1130b079723a0bad 276 SMART SM00871 125 276 1.3E-33 T 23-04-2016 IPR010499 Bacterial transcription activator, effector binding RR42_RS20800 133bcb59b0c5006f1130b079723a0bad 276 Gene3D G3DSA:1.10.10.60 65 112 1.8E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS20800 133bcb59b0c5006f1130b079723a0bad 276 Pfam PF12833 Helix-turn-helix domain 33 111 2.9E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RR42_RS20800 133bcb59b0c5006f1130b079723a0bad 276 Gene3D G3DSA:3.20.80.10 127 276 1.1E-40 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain RR42_RS20800 133bcb59b0c5006f1130b079723a0bad 276 SMART SM00342 27 110 3.3E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RR42_RS20800 133bcb59b0c5006f1130b079723a0bad 276 Gene3D G3DSA:1.10.10.60 9 64 3.3E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS20800 133bcb59b0c5006f1130b079723a0bad 276 PANTHER PTHR40055 28 276 3.8E-34 T 23-04-2016 RR42_RS20800 133bcb59b0c5006f1130b079723a0bad 276 SUPERFAMILY SSF46689 11 58 2.28E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS20800 133bcb59b0c5006f1130b079723a0bad 276 SUPERFAMILY SSF46689 63 112 1.93E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS20800 133bcb59b0c5006f1130b079723a0bad 276 Pfam PF06445 GyrI-like small molecule binding domain 127 276 4.9E-31 T 23-04-2016 IPR029442 GyrI-like small molecule binding domain RR42_RS20800 133bcb59b0c5006f1130b079723a0bad 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 64 106 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RR42_RS20800 133bcb59b0c5006f1130b079723a0bad 276 SUPERFAMILY SSF55136 127 276 9.1E-35 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain RR42_RS12610 d39fb0e698cbb527239e01856bae6abd 332 Gene3D G3DSA:3.40.50.1170 4 205 1.1E-60 T 23-04-2016 IPR027474 L-asparaginase, N-terminal RR42_RS12610 d39fb0e698cbb527239e01856bae6abd 332 PRINTS PR00139 Asparaginase/glutaminase family signature 87 105 1.5E-20 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RR42_RS12610 d39fb0e698cbb527239e01856bae6abd 332 PRINTS PR00139 Asparaginase/glutaminase family signature 7 18 1.5E-20 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RR42_RS12610 d39fb0e698cbb527239e01856bae6abd 332 PRINTS PR00139 Asparaginase/glutaminase family signature 262 280 1.5E-20 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RR42_RS12610 d39fb0e698cbb527239e01856bae6abd 332 PANTHER PTHR11707 4 315 2.4E-65 T 23-04-2016 RR42_RS12610 d39fb0e698cbb527239e01856bae6abd 332 SMART SM00870 6 322 2.7E-109 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RR42_RS12610 d39fb0e698cbb527239e01856bae6abd 332 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 88 98 - T 23-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 RR42_RS12610 d39fb0e698cbb527239e01856bae6abd 332 Pfam PF00710 Asparaginase, N-terminal 6 199 5.9E-54 T 23-04-2016 IPR027474 L-asparaginase, N-terminal RR42_RS12610 d39fb0e698cbb527239e01856bae6abd 332 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 9 17 - T 23-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 RR42_RS12610 d39fb0e698cbb527239e01856bae6abd 332 Gene3D G3DSA:3.40.50.40 215 330 9.9E-30 T 23-04-2016 IPR027473 L-asparaginase, C-terminal domain RR42_RS12610 d39fb0e698cbb527239e01856bae6abd 332 PIRSF PIRSF001220 2 330 8.0E-78 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RR42_RS12610 d39fb0e698cbb527239e01856bae6abd 332 PIRSF PIRSF500176 4 327 2.1E-70 T 23-04-2016 RR42_RS12610 d39fb0e698cbb527239e01856bae6abd 332 PANTHER PTHR11707:SF29 4 315 2.4E-65 T 23-04-2016 RR42_RS12610 d39fb0e698cbb527239e01856bae6abd 332 SUPERFAMILY SSF53774 4 329 1.96E-85 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RR42_RS15695 d3106c7ddba37eaddfdfabd1ffb69854 385 Gene3D G3DSA:3.40.50.2000 66 138 5.6E-6 T 23-04-2016 RR42_RS15695 d3106c7ddba37eaddfdfabd1ffb69854 385 SUPERFAMILY SSF53756 11 365 8.48E-79 T 23-04-2016 RR42_RS15695 d3106c7ddba37eaddfdfabd1ffb69854 385 Pfam PF00534 Glycosyl transferases group 1 195 345 2.9E-33 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 RR42_RS15695 d3106c7ddba37eaddfdfabd1ffb69854 385 PANTHER PTHR12526 5 377 9.9E-58 T 23-04-2016 RR42_RS15695 d3106c7ddba37eaddfdfabd1ffb69854 385 Pfam PF13439 Glycosyltransferase Family 4 21 181 4.9E-29 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RR42_RS15695 d3106c7ddba37eaddfdfabd1ffb69854 385 Gene3D G3DSA:3.40.50.2000 195 344 1.2E-28 T 23-04-2016 RR42_RS09370 4987ad1e691052a8b079576faaceda8a 351 PANTHER PTHR37418 131 322 1.5E-29 T 23-04-2016 RR42_RS09370 4987ad1e691052a8b079576faaceda8a 351 PANTHER PTHR37418 13 99 1.5E-29 T 23-04-2016 RR42_RS09370 4987ad1e691052a8b079576faaceda8a 351 Pfam PF05853 beta-keto acid cleavage enzyme 15 318 1.3E-64 T 23-04-2016 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00600+2.3.1.24|UniPathway: UPA00870 RR42_RS09370 4987ad1e691052a8b079576faaceda8a 351 Gene3D G3DSA:3.20.20.70 14 320 8.0E-84 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS09370 4987ad1e691052a8b079576faaceda8a 351 PANTHER PTHR37418:SF2 131 322 1.5E-29 T 23-04-2016 RR42_RS09370 4987ad1e691052a8b079576faaceda8a 351 PANTHER PTHR37418:SF2 13 99 1.5E-29 T 23-04-2016 RR42_RS14095 0267c10efd081daed5e359d34157c4c5 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 74 9.6E-36 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 RR42_RS14095 0267c10efd081daed5e359d34157c4c5 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.327 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 RR42_RS14095 0267c10efd081daed5e359d34157c4c5 79 SUPERFAMILY SSF47336 2 77 8.11E-24 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RR42_RS14095 0267c10efd081daed5e359d34157c4c5 79 SMART SM00823 Phosphopantetheine attachment site 5 63 0.0096 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RR42_RS14095 0267c10efd081daed5e359d34157c4c5 79 Gene3D G3DSA:1.10.1200.10 3 77 2.7E-35 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RR42_RS14095 0267c10efd081daed5e359d34157c4c5 79 Pfam PF00550 Phosphopantetheine attachment site 6 72 5.8E-17 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RR42_RS14095 0267c10efd081daed5e359d34157c4c5 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site RR42_RS14095 0267c10efd081daed5e359d34157c4c5 79 PANTHER PTHR20863 4 73 7.7E-30 T 23-04-2016 RR42_RS14095 0267c10efd081daed5e359d34157c4c5 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 75 1.0E-12 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 RR42_RS32870 b42ba339c3d085911465db624c410be5 101 SUPERFAMILY SSF56784 9 100 6.56E-23 T 23-04-2016 IPR023214 HAD-like domain RR42_RS32870 b42ba339c3d085911465db624c410be5 101 PANTHER PTHR24093 3 99 8.8E-28 T 23-04-2016 RR42_RS32870 b42ba339c3d085911465db624c410be5 101 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 9 100 9.4E-22 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 RR42_RS32870 b42ba339c3d085911465db624c410be5 101 PANTHER PTHR24093:SF50 3 99 8.8E-28 T 23-04-2016 RR42_RS32870 b42ba339c3d085911465db624c410be5 101 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 54 66 5.1E-7 T 23-04-2016 RR42_RS32870 b42ba339c3d085911465db624c410be5 101 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 31 50 5.1E-7 T 23-04-2016 RR42_RS32870 b42ba339c3d085911465db624c410be5 101 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 3 19 9.2E-6 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 RR42_RS32870 b42ba339c3d085911465db624c410be5 101 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 31 47 9.2E-6 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 RR42_RS32870 b42ba339c3d085911465db624c410be5 101 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 62 87 9.2E-6 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 RR42_RS32870 b42ba339c3d085911465db624c410be5 101 Pfam PF00702 haloacid dehalogenase-like hydrolase 6 44 6.1E-8 T 23-04-2016 RR42_RS32870 b42ba339c3d085911465db624c410be5 101 Gene3D G3DSA:3.40.50.1000 8 99 4.5E-24 T 23-04-2016 IPR023214 HAD-like domain RR42_RS05565 01b0431b1d7f47533c603c3f21026465 699 Pfam PF00361 Proton-conducting membrane transporter 147 429 6.6E-85 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 RR42_RS05565 01b0431b1d7f47533c603c3f21026465 699 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 124 144 1.6E-67 T 23-04-2016 RR42_RS05565 01b0431b1d7f47533c603c3f21026465 699 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 266 292 1.6E-67 T 23-04-2016 RR42_RS05565 01b0431b1d7f47533c603c3f21026465 699 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 96 121 1.6E-67 T 23-04-2016 RR42_RS05565 01b0431b1d7f47533c603c3f21026465 699 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 439 458 1.6E-67 T 23-04-2016 RR42_RS05565 01b0431b1d7f47533c603c3f21026465 699 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 171 192 1.6E-67 T 23-04-2016 RR42_RS05565 01b0431b1d7f47533c603c3f21026465 699 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 244 265 1.6E-67 T 23-04-2016 RR42_RS05565 01b0431b1d7f47533c603c3f21026465 699 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 334 346 1.6E-67 T 23-04-2016 RR42_RS05565 01b0431b1d7f47533c603c3f21026465 699 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 438 460 1.4E-17 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RR42_RS05565 01b0431b1d7f47533c603c3f21026465 699 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 501 522 1.4E-17 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RR42_RS05565 01b0431b1d7f47533c603c3f21026465 699 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 284 306 1.4E-17 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RR42_RS05565 01b0431b1d7f47533c603c3f21026465 699 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 72 96 1.4E-17 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RR42_RS05565 01b0431b1d7f47533c603c3f21026465 699 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 98 118 1.4E-17 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RR42_RS05565 01b0431b1d7f47533c603c3f21026465 699 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 9 687 5.7E-244 T 23-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 RR42_RS05565 01b0431b1d7f47533c603c3f21026465 699 PANTHER PTHR22773:SF50 1 640 1.5E-259 T 23-04-2016 RR42_RS05565 01b0431b1d7f47533c603c3f21026465 699 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 78 135 1.5E-26 T 23-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal RR42_RS05565 01b0431b1d7f47533c603c3f21026465 699 PANTHER PTHR22773 1 640 1.5E-259 T 23-04-2016 RR42_RS14390 86fe8f4b72d223cd42bffe5f7676139f 216 PANTHER PTHR11670:SF27 1 208 2.2E-101 T 23-04-2016 RR42_RS14390 86fe8f4b72d223cd42bffe5f7676139f 216 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 2.7E-79 T 23-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14390 86fe8f4b72d223cd42bffe5f7676139f 216 SUPERFAMILY SSF52016 1 201 3.34E-62 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RR42_RS14390 86fe8f4b72d223cd42bffe5f7676139f 216 PANTHER PTHR11670 1 208 2.2E-101 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14390 86fe8f4b72d223cd42bffe5f7676139f 216 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 43.284 T 23-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14390 86fe8f4b72d223cd42bffe5f7676139f 216 Gene3D G3DSA:3.20.19.10 1 204 9.4E-52 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RR42_RS14390 86fe8f4b72d223cd42bffe5f7676139f 216 Pfam PF00694 Aconitase C-terminal domain 1 131 7.3E-38 T 23-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS12720 44033923d120105db733bd05b631a808 460 PANTHER PTHR30386 1 130 1.1E-35 T 23-04-2016 RR42_RS12720 44033923d120105db733bd05b631a808 460 PANTHER PTHR30386 151 458 1.1E-35 T 23-04-2016 RR42_RS12720 44033923d120105db733bd05b631a808 460 Pfam PF13533 Biotin-lipoyl like 80 124 1.0E-7 T 23-04-2016 RR42_RS12720 44033923d120105db733bd05b631a808 460 PANTHER PTHR30386:SF8 1 130 1.1E-35 T 23-04-2016 RR42_RS12720 44033923d120105db733bd05b631a808 460 PANTHER PTHR30386:SF8 151 458 1.1E-35 T 23-04-2016 RR42_RS12720 44033923d120105db733bd05b631a808 460 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 430 445 2.0E-17 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 RR42_RS12720 44033923d120105db733bd05b631a808 460 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 44 67 2.0E-17 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 RR42_RS12720 44033923d120105db733bd05b631a808 460 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 86 106 2.0E-17 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 RR42_RS12720 44033923d120105db733bd05b631a808 460 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 386 2.0E-17 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 RR42_RS12720 44033923d120105db733bd05b631a808 460 Pfam PF13437 HlyD family secretion protein 317 433 1.1E-11 T 23-04-2016 RR42_RS12720 44033923d120105db733bd05b631a808 460 Gene3D G3DSA:2.40.50.100 308 346 2.9E-8 T 23-04-2016 RR42_RS12720 44033923d120105db733bd05b631a808 460 Gene3D G3DSA:2.40.50.100 70 106 2.9E-8 T 23-04-2016 RR42_RS17410 688e8aededb13b1c579e3c7eae6c7c17 623 Gene3D G3DSA:1.20.1640.10 406 603 1.7E-21 T 23-04-2016 RR42_RS17410 688e8aededb13b1c579e3c7eae6c7c17 623 SUPERFAMILY SSF82866 402 601 2.62E-39 T 23-04-2016 RR42_RS17410 688e8aededb13b1c579e3c7eae6c7c17 623 Pfam PF13721 SecD export protein N-terminal TM region 1 112 6.5E-36 T 23-04-2016 IPR027398 SecD export protein N-terminal TM domain RR42_RS17410 688e8aededb13b1c579e3c7eae6c7c17 623 PANTHER PTHR30081:SF1 320 601 4.4E-174 T 23-04-2016 RR42_RS17410 688e8aededb13b1c579e3c7eae6c7c17 623 PANTHER PTHR30081:SF1 1 182 4.4E-174 T 23-04-2016 RR42_RS17410 688e8aededb13b1c579e3c7eae6c7c17 623 PANTHER PTHR30081:SF1 231 289 4.4E-174 T 23-04-2016 RR42_RS17410 688e8aededb13b1c579e3c7eae6c7c17 623 PANTHER PTHR30081 320 601 4.4E-174 T 23-04-2016 RR42_RS17410 688e8aededb13b1c579e3c7eae6c7c17 623 PANTHER PTHR30081 1 182 4.4E-174 T 23-04-2016 RR42_RS17410 688e8aededb13b1c579e3c7eae6c7c17 623 PANTHER PTHR30081 231 289 4.4E-174 T 23-04-2016 RR42_RS17410 688e8aededb13b1c579e3c7eae6c7c17 623 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 132 592 9.3E-135 T 23-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 RR42_RS17410 688e8aededb13b1c579e3c7eae6c7c17 623 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 352 585 1.5E-69 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RR42_RS17410 688e8aededb13b1c579e3c7eae6c7c17 623 Pfam PF07549 SecD/SecF GG Motif 128 148 9.2E-6 T 23-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RR42_RS17410 688e8aededb13b1c579e3c7eae6c7c17 623 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 608 46.088 T 23-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 RR42_RS17410 688e8aededb13b1c579e3c7eae6c7c17 623 Pfam PF02355 Protein export membrane protein 424 596 1.0E-21 T 23-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RR42_RS03440 cc5f6117ebb6a17bbaebe4c3738e3f3b 252 Pfam PF00106 short chain dehydrogenase 7 196 4.4E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS03440 cc5f6117ebb6a17bbaebe4c3738e3f3b 252 PANTHER PTHR24322 10 142 1.6E-52 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS03440 cc5f6117ebb6a17bbaebe4c3738e3f3b 252 PANTHER PTHR24322 158 194 1.6E-52 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS03440 cc5f6117ebb6a17bbaebe4c3738e3f3b 252 PANTHER PTHR24322:SF356 10 142 1.6E-52 T 23-04-2016 RR42_RS03440 cc5f6117ebb6a17bbaebe4c3738e3f3b 252 PANTHER PTHR24322:SF356 158 194 1.6E-52 T 23-04-2016 RR42_RS03440 cc5f6117ebb6a17bbaebe4c3738e3f3b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 4.3E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS03440 cc5f6117ebb6a17bbaebe4c3738e3f3b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 4.3E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS03440 cc5f6117ebb6a17bbaebe4c3738e3f3b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 4.3E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS03440 cc5f6117ebb6a17bbaebe4c3738e3f3b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.3E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS03440 cc5f6117ebb6a17bbaebe4c3738e3f3b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 4.3E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS03440 cc5f6117ebb6a17bbaebe4c3738e3f3b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 4.3E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS03440 cc5f6117ebb6a17bbaebe4c3738e3f3b 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RR42_RS03440 cc5f6117ebb6a17bbaebe4c3738e3f3b 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.0E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS03440 cc5f6117ebb6a17bbaebe4c3738e3f3b 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.0E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS03440 cc5f6117ebb6a17bbaebe4c3738e3f3b 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 2.0E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS03440 cc5f6117ebb6a17bbaebe4c3738e3f3b 252 SUPERFAMILY SSF51735 4 247 4.89E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS03440 cc5f6117ebb6a17bbaebe4c3738e3f3b 252 Gene3D G3DSA:3.40.50.720 2 249 7.7E-68 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS13730 e88861c40dca4157a7b577b1e336c9b0 204 SUPERFAMILY SSF48498 79 192 5.34E-23 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RR42_RS13730 e88861c40dca4157a7b577b1e336c9b0 204 Gene3D G3DSA:1.10.10.60 1 65 8.7E-21 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS13730 e88861c40dca4157a7b577b1e336c9b0 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 2.3E-10 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS13730 e88861c40dca4157a7b577b1e336c9b0 204 PANTHER PTHR30055:SF44 1 193 1.3E-44 T 23-04-2016 RR42_RS13730 e88861c40dca4157a7b577b1e336c9b0 204 Gene3D G3DSA:1.10.357.10 72 192 1.4E-21 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS13730 e88861c40dca4157a7b577b1e336c9b0 204 PANTHER PTHR30055 1 193 1.3E-44 T 23-04-2016 RR42_RS13730 e88861c40dca4157a7b577b1e336c9b0 204 SUPERFAMILY SSF46689 2 80 1.13E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS13730 e88861c40dca4157a7b577b1e336c9b0 204 ProSitePatterns PS01081 TetR-type HTH domain signature. 24 54 - T 23-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RR42_RS00565 d30f2de4bc59070ed3f65f36c5022079 772 Gene3D G3DSA:3.90.1310.10 128 264 1.9E-36 T 23-04-2016 RR42_RS00565 d30f2de4bc59070ed3f65f36c5022079 772 PANTHER PTHR30627 2 193 2.8E-219 T 23-04-2016 RR42_RS00565 d30f2de4bc59070ed3f65f36c5022079 772 PANTHER PTHR30627 209 665 2.8E-219 T 23-04-2016 RR42_RS00565 d30f2de4bc59070ed3f65f36c5022079 772 Gene3D G3DSA:3.40.710.10 265 629 8.2E-108 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS00565 d30f2de4bc59070ed3f65f36c5022079 772 PANTHER PTHR30627:SF2 2 193 2.8E-219 T 23-04-2016 RR42_RS00565 d30f2de4bc59070ed3f65f36c5022079 772 PANTHER PTHR30627:SF2 209 665 2.8E-219 T 23-04-2016 RR42_RS00565 d30f2de4bc59070ed3f65f36c5022079 772 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 17 627 7.1E-235 T 23-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 RR42_RS00565 d30f2de4bc59070ed3f65f36c5022079 772 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 251 2.1E-43 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RR42_RS00565 d30f2de4bc59070ed3f65f36c5022079 772 SUPERFAMILY SSF56519 53 265 4.97E-47 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RR42_RS00565 d30f2de4bc59070ed3f65f36c5022079 772 Pfam PF00905 Penicillin binding protein transpeptidase domain 283 623 3.1E-68 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RR42_RS00565 d30f2de4bc59070ed3f65f36c5022079 772 SUPERFAMILY SSF56601 266 628 4.32E-101 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS02280 1dd03d5f79be59bd22c5a86d3e1260ec 499 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 487 4.9E-116 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RR42_RS02280 1dd03d5f79be59bd22c5a86d3e1260ec 499 SUPERFAMILY SSF56954 10 38 1.44E-94 T 23-04-2016 RR42_RS02280 1dd03d5f79be59bd22c5a86d3e1260ec 499 SUPERFAMILY SSF56954 75 490 1.44E-94 T 23-04-2016 RR42_RS02280 1dd03d5f79be59bd22c5a86d3e1260ec 499 PANTHER PTHR30203 17 499 1.0E-81 T 23-04-2016 RR42_RS02280 1dd03d5f79be59bd22c5a86d3e1260ec 499 PANTHER PTHR30203:SF9 17 499 1.0E-81 T 23-04-2016 RR42_RS02280 1dd03d5f79be59bd22c5a86d3e1260ec 499 Gene3D G3DSA:1.20.1600.10 72 490 1.0E-90 T 23-04-2016 RR42_RS02280 1dd03d5f79be59bd22c5a86d3e1260ec 499 Pfam PF02321 Outer membrane efflux protein 84 277 6.4E-19 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RR42_RS02280 1dd03d5f79be59bd22c5a86d3e1260ec 499 Pfam PF02321 Outer membrane efflux protein 305 485 2.6E-24 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RR42_RS10780 c7abc77b1c2ba83e73f11ea0a13e8317 61 Pfam PF11174 Protein of unknown function (DUF2970) 4 58 1.8E-17 T 23-04-2016 IPR021344 Protein of unknown function DUF2970 RR42_RS01600 15e5771c58dfb956e0655eda69e28b0f 1102 Gene3D G3DSA:3.40.50.300 214 419 8.4E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01600 15e5771c58dfb956e0655eda69e28b0f 1102 SUPERFAMILY SSF51703 520 1098 6.54E-151 T 23-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 RR42_RS01600 15e5771c58dfb956e0655eda69e28b0f 1102 SUPERFAMILY SSF52242 29 164 8.77E-41 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RR42_RS01600 15e5771c58dfb956e0655eda69e28b0f 1102 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 32 145 3.0E-16 T 23-04-2016 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 RR42_RS01600 15e5771c58dfb956e0655eda69e28b0f 1102 Pfam PF03308 ArgK protein 186 414 2.8E-42 T 23-04-2016 RR42_RS01600 15e5771c58dfb956e0655eda69e28b0f 1102 Pfam PF02310 B12 binding domain 35 133 4.0E-11 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RR42_RS01600 15e5771c58dfb956e0655eda69e28b0f 1102 Pfam PF01642 Methylmalonyl-CoA mutase 574 1096 2.4E-146 T 23-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 RR42_RS01600 15e5771c58dfb956e0655eda69e28b0f 1102 Gene3D G3DSA:3.20.20.240 553 1098 9.0E-195 T 23-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 RR42_RS01600 15e5771c58dfb956e0655eda69e28b0f 1102 PANTHER PTHR23408 488 711 1.0E-204 T 23-04-2016 RR42_RS01600 15e5771c58dfb956e0655eda69e28b0f 1102 PANTHER PTHR23408 734 1102 1.0E-204 T 23-04-2016 RR42_RS01600 15e5771c58dfb956e0655eda69e28b0f 1102 Gene3D G3DSA:3.40.50.280 31 162 6.0E-37 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RR42_RS01600 15e5771c58dfb956e0655eda69e28b0f 1102 PANTHER PTHR23408:SF1 488 711 1.0E-204 T 23-04-2016 RR42_RS01600 15e5771c58dfb956e0655eda69e28b0f 1102 PANTHER PTHR23408:SF1 734 1102 1.0E-204 T 23-04-2016 RR42_RS01600 15e5771c58dfb956e0655eda69e28b0f 1102 SUPERFAMILY SSF52540 148 474 2.2E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20180 bfc9b5d3ae3103f7eb64bbbe3532ac6a 156 SUPERFAMILY SSF81573 63 121 3.27E-11 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain RR42_RS20180 bfc9b5d3ae3103f7eb64bbbe3532ac6a 156 Gene3D G3DSA:1.20.5.620 63 121 4.4E-12 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain RR42_RS20180 bfc9b5d3ae3103f7eb64bbbe3532ac6a 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 1.2E-40 T 23-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 RR42_RS20180 bfc9b5d3ae3103f7eb64bbbe3532ac6a 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 2.1E-29 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RR42_RS20180 bfc9b5d3ae3103f7eb64bbbe3532ac6a 156 PANTHER PTHR33445 1 156 6.2E-38 T 23-04-2016 RR42_RS20180 bfc9b5d3ae3103f7eb64bbbe3532ac6a 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 12.481 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RR42_RS05715 a0a5a54600a83b99129b0a8f3c2eb26f 420 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 137 234 4.8E-20 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RR42_RS05715 a0a5a54600a83b99129b0a8f3c2eb26f 420 SUPERFAMILY SSF47203 248 403 4.99E-46 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS05715 a0a5a54600a83b99129b0a8f3c2eb26f 420 PANTHER PTHR10909:SF282 1 420 1.7E-219 T 23-04-2016 RR42_RS05715 a0a5a54600a83b99129b0a8f3c2eb26f 420 Gene3D G3DSA:2.40.110.10 136 239 1.2E-38 T 23-04-2016 RR42_RS05715 a0a5a54600a83b99129b0a8f3c2eb26f 420 PANTHER PTHR10909 1 420 1.7E-219 T 23-04-2016 RR42_RS05715 a0a5a54600a83b99129b0a8f3c2eb26f 420 Gene3D G3DSA:1.20.140.10 240 405 3.8E-49 T 23-04-2016 RR42_RS05715 a0a5a54600a83b99129b0a8f3c2eb26f 420 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 133 8.7E-12 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS05715 a0a5a54600a83b99129b0a8f3c2eb26f 420 SUPERFAMILY SSF56645 2 263 3.8E-62 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RR42_RS05715 a0a5a54600a83b99129b0a8f3c2eb26f 420 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 250 398 1.1E-38 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS05715 a0a5a54600a83b99129b0a8f3c2eb26f 420 Gene3D G3DSA:1.10.540.10 1 135 3.7E-31 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS01155 041834b9a3f4dc797960e74802efd1b0 232 Gene3D G3DSA:3.40.50.2300 3 124 8.4E-38 T 23-04-2016 RR42_RS01155 041834b9a3f4dc797960e74802efd1b0 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 230 3.9E-22 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS01155 041834b9a3f4dc797960e74802efd1b0 232 SMART SM00448 5 115 3.2E-41 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS01155 041834b9a3f4dc797960e74802efd1b0 232 SUPERFAMILY SSF46894 140 231 4.54E-25 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS01155 041834b9a3f4dc797960e74802efd1b0 232 PANTHER PTHR26402 5 232 2.2E-120 T 23-04-2016 RR42_RS01155 041834b9a3f4dc797960e74802efd1b0 232 Gene3D G3DSA:1.10.10.10 140 231 1.7E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS01155 041834b9a3f4dc797960e74802efd1b0 232 Pfam PF00072 Response regulator receiver domain 7 115 3.8E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS01155 041834b9a3f4dc797960e74802efd1b0 232 SMART SM00862 154 230 5.9E-24 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS01155 041834b9a3f4dc797960e74802efd1b0 232 SUPERFAMILY SSF52172 3 128 8.4E-40 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS01155 041834b9a3f4dc797960e74802efd1b0 232 PANTHER PTHR26402:SF573 5 232 2.2E-120 T 23-04-2016 RR42_RS13695 904621a96cb5d58783738dd01ca79192 351 Pfam PF00355 Rieske [2Fe-2S] domain 21 101 3.2E-17 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RR42_RS13695 904621a96cb5d58783738dd01ca79192 351 SUPERFAMILY SSF55961 136 333 9.42E-44 T 23-04-2016 RR42_RS13695 904621a96cb5d58783738dd01ca79192 351 SUPERFAMILY SSF50022 7 135 5.11E-33 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RR42_RS13695 904621a96cb5d58783738dd01ca79192 351 PANTHER PTHR21266 17 327 3.0E-70 T 23-04-2016 RR42_RS13695 904621a96cb5d58783738dd01ca79192 351 PANTHER PTHR21266:SF23 17 327 3.0E-70 T 23-04-2016 RR42_RS13695 904621a96cb5d58783738dd01ca79192 351 Gene3D G3DSA:2.102.10.10 19 136 7.4E-32 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RR42_RS12095 22658f49ee7af9ab4a7ec96badb6f9a3 415 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 36 107 7.4E-5 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS12095 22658f49ee7af9ab4a7ec96badb6f9a3 415 PANTHER PTHR10909:SF275 28 404 9.4E-59 T 23-04-2016 RR42_RS12095 22658f49ee7af9ab4a7ec96badb6f9a3 415 SUPERFAMILY SSF56645 34 230 2.09E-32 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RR42_RS12095 22658f49ee7af9ab4a7ec96badb6f9a3 415 PIRSF PIRSF016578 10 411 6.6E-31 T 23-04-2016 RR42_RS12095 22658f49ee7af9ab4a7ec96badb6f9a3 415 Gene3D G3DSA:2.40.110.10 141 222 1.8E-15 T 23-04-2016 RR42_RS12095 22658f49ee7af9ab4a7ec96badb6f9a3 415 SUPERFAMILY SSF47203 260 410 1.24E-20 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS12095 22658f49ee7af9ab4a7ec96badb6f9a3 415 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 259 389 3.2E-14 T 23-04-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain RR42_RS12095 22658f49ee7af9ab4a7ec96badb6f9a3 415 Gene3D G3DSA:1.10.540.10 19 110 1.9E-21 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS12095 22658f49ee7af9ab4a7ec96badb6f9a3 415 PANTHER PTHR10909 28 404 9.4E-59 T 23-04-2016 RR42_RS12095 22658f49ee7af9ab4a7ec96badb6f9a3 415 Gene3D G3DSA:1.20.140.10 223 410 4.6E-49 T 23-04-2016 RR42_RS14450 b59a7c73f0e0ed202685fe11a1d75da7 121 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 15 119 9.2E-40 T 23-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 RR42_RS14450 b59a7c73f0e0ed202685fe11a1d75da7 121 Gene3D G3DSA:1.20.1300.10 10 121 1.0E-38 T 23-04-2016 RR42_RS14450 b59a7c73f0e0ed202685fe11a1d75da7 121 PANTHER PTHR38689:SF1 18 121 9.4E-30 T 23-04-2016 RR42_RS14450 b59a7c73f0e0ed202685fe11a1d75da7 121 PANTHER PTHR38689 18 121 9.4E-30 T 23-04-2016 RR42_RS14450 b59a7c73f0e0ed202685fe11a1d75da7 121 SUPERFAMILY SSF81343 10 121 8.01E-33 T 23-04-2016 RR42_RS14450 b59a7c73f0e0ed202685fe11a1d75da7 121 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 107 4.4E-17 T 23-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 RR42_RS14450 b59a7c73f0e0ed202685fe11a1d75da7 121 PIRSF PIRSF000169 7 121 1.1E-40 T 23-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 RR42_RS00605 f705e35d63180649097e93a6f5304767 486 PANTHER PTHR11659:SF0 2 484 1.8E-243 T 23-04-2016 RR42_RS00605 f705e35d63180649097e93a6f5304767 486 SUPERFAMILY SSF89095 301 407 2.88E-30 T 23-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 RR42_RS00605 f705e35d63180649097e93a6f5304767 486 SUPERFAMILY SSF55931 4 300 3.47E-116 T 23-04-2016 RR42_RS00605 f705e35d63180649097e93a6f5304767 486 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 485 37.708 T 23-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 RR42_RS00605 f705e35d63180649097e93a6f5304767 486 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 148 162 - T 23-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 RR42_RS00605 f705e35d63180649097e93a6f5304767 486 Gene3D G3DSA:1.10.10.410 422 484 1.2E-5 T 23-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RR42_RS00605 f705e35d63180649097e93a6f5304767 486 PANTHER PTHR11659 2 484 1.8E-243 T 23-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 RR42_RS00605 f705e35d63180649097e93a6f5304767 486 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 484 3.4E-163 T 23-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 RR42_RS00605 f705e35d63180649097e93a6f5304767 486 Pfam PF02637 GatB domain 332 484 5.5E-48 T 23-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 RR42_RS00605 f705e35d63180649097e93a6f5304767 486 Pfam PF02934 GatB/GatE catalytic domain 5 293 4.1E-108 T 23-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 RR42_RS00605 f705e35d63180649097e93a6f5304767 486 SMART SM00845 332 484 1.3E-77 T 23-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 RR42_RS02120 850578a00cd28614e261d76674c7589f 192 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 186 1.4E-56 T 23-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 RR42_RS02120 850578a00cd28614e261d76674c7589f 192 SUPERFAMILY SSF52317 3 187 7.55E-53 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RR42_RS02120 850578a00cd28614e261d76674c7589f 192 PANTHER PTHR11019:SF112 111 144 1.1E-56 T 23-04-2016 RR42_RS02120 850578a00cd28614e261d76674c7589f 192 PANTHER PTHR11019:SF112 3 93 1.1E-56 T 23-04-2016 RR42_RS02120 850578a00cd28614e261d76674c7589f 192 Gene3D G3DSA:3.40.50.880 1 186 1.1E-59 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RR42_RS02120 850578a00cd28614e261d76674c7589f 192 Pfam PF01965 DJ-1/PfpI family 3 184 6.3E-54 T 23-04-2016 IPR002818 DJ-1/PfpI RR42_RS02120 850578a00cd28614e261d76674c7589f 192 PANTHER PTHR11019 111 144 1.1E-56 T 23-04-2016 RR42_RS02120 850578a00cd28614e261d76674c7589f 192 PANTHER PTHR11019 3 93 1.1E-56 T 23-04-2016 RR42_RS12365 938e32cd8f7cbc41d518726e9f6f1e68 428 Gene3D G3DSA:2.130.10.10 172 421 2.6E-8 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RR42_RS12365 938e32cd8f7cbc41d518726e9f6f1e68 428 SUPERFAMILY SSF82171 182 422 9.16E-11 T 23-04-2016 RR42_RS06975 03f20b93a7ffc6297428f82b19a1ca96 289 Pfam PF09684 Phage tail protein (Tail_P2_I) 229 265 1.2E-4 T 23-04-2016 IPR006521 Tail protein I RR42_RS14515 7c1bda482ca8389290e5ce5a06cf4571 251 PIRSF PIRSF030959 1 251 1.1E-88 T 23-04-2016 IPR014562 Uncharacterised conserved protein UCP030959, divergent TPR repeat-containing RR42_RS14515 7c1bda482ca8389290e5ce5a06cf4571 251 Pfam PF14559 Tetratricopeptide repeat 99 160 2.1E-6 T 23-04-2016 RR42_RS14515 7c1bda482ca8389290e5ce5a06cf4571 251 Gene3D G3DSA:1.25.40.10 75 224 1.8E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS14515 7c1bda482ca8389290e5ce5a06cf4571 251 SUPERFAMILY SSF48452 89 157 1.19E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS01500 a6586556f686e6c67c668ce3b2a1d178 139 PANTHER PTHR12418 19 139 2.3E-52 T 23-04-2016 RR42_RS01500 a6586556f686e6c67c668ce3b2a1d178 139 Gene3D G3DSA:3.10.129.10 2 138 4.0E-50 T 23-04-2016 IPR029069 HotDog domain RR42_RS01500 a6586556f686e6c67c668ce3b2a1d178 139 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 135 1.2E-39 T 23-04-2016 IPR003736 Phenylacetic acid degradation-related domain RR42_RS01500 a6586556f686e6c67c668ce3b2a1d178 139 PANTHER PTHR12418:SF33 19 139 2.3E-52 T 23-04-2016 RR42_RS01500 a6586556f686e6c67c668ce3b2a1d178 139 Pfam PF03061 Thioesterase superfamily 50 128 4.6E-17 T 23-04-2016 IPR006683 Thioesterase domain RR42_RS01500 a6586556f686e6c67c668ce3b2a1d178 139 SUPERFAMILY SSF54637 13 138 6.73E-33 T 23-04-2016 IPR029069 HotDog domain RR42_RS14015 92062121793caaf3416671b403ad0df6 349 PANTHER PTHR30480 13 339 3.4E-101 T 23-04-2016 RR42_RS14015 92062121793caaf3416671b403ad0df6 349 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 12 347 49.435 T 23-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 RR42_RS14015 92062121793caaf3416671b403ad0df6 349 SUPERFAMILY SSF51445 12 303 6.21E-79 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily RR42_RS14015 92062121793caaf3416671b403ad0df6 349 Gene3D G3DSA:3.20.20.300 13 316 4.9E-88 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RR42_RS14015 92062121793caaf3416671b403ad0df6 349 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 16 314 4.6E-71 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RR42_RS14015 92062121793caaf3416671b403ad0df6 349 PANTHER PTHR30480:SF7 13 339 3.4E-101 T 23-04-2016 RR42_RS14015 92062121793caaf3416671b403ad0df6 349 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 244 261 - T 23-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 RR42_RS18300 a383f83a30790b2bedf8980c03ae59d6 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 4.5E-5 T 23-04-2016 RR42_RS18300 a383f83a30790b2bedf8980c03ae59d6 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 4.5E-5 T 23-04-2016 RR42_RS18300 a383f83a30790b2bedf8980c03ae59d6 189 SUPERFAMILY SSF52317 1 187 2.87E-58 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RR42_RS18300 a383f83a30790b2bedf8980c03ae59d6 189 Pfam PF00117 Glutamine amidotransferase class-I 4 185 2.6E-57 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RR42_RS18300 a383f83a30790b2bedf8980c03ae59d6 189 PANTHER PTHR11922:SF7 1 186 2.7E-97 T 23-04-2016 RR42_RS18300 a383f83a30790b2bedf8980c03ae59d6 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 4.4E-13 T 23-04-2016 RR42_RS18300 a383f83a30790b2bedf8980c03ae59d6 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.4E-13 T 23-04-2016 RR42_RS18300 a383f83a30790b2bedf8980c03ae59d6 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.4E-13 T 23-04-2016 RR42_RS18300 a383f83a30790b2bedf8980c03ae59d6 189 PRINTS PR00097 Anthranilate synthase component II signature 164 177 3.3E-34 T 23-04-2016 RR42_RS18300 a383f83a30790b2bedf8980c03ae59d6 189 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.3E-34 T 23-04-2016 RR42_RS18300 a383f83a30790b2bedf8980c03ae59d6 189 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.3E-34 T 23-04-2016 RR42_RS18300 a383f83a30790b2bedf8980c03ae59d6 189 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.3E-34 T 23-04-2016 RR42_RS18300 a383f83a30790b2bedf8980c03ae59d6 189 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.3E-34 T 23-04-2016 RR42_RS18300 a383f83a30790b2bedf8980c03ae59d6 189 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.3E-34 T 23-04-2016 RR42_RS18300 a383f83a30790b2bedf8980c03ae59d6 189 Gene3D G3DSA:3.40.50.880 2 186 8.7E-71 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RR42_RS18300 a383f83a30790b2bedf8980c03ae59d6 189 PANTHER PTHR11922 1 186 2.7E-97 T 23-04-2016 RR42_RS18300 a383f83a30790b2bedf8980c03ae59d6 189 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 2.3E-83 T 23-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RR42_RS19360 5858c9b0186e14355cfee14b3c01b75c 396 PANTHER PTHR23115 1 394 4.6E-262 T 23-04-2016 RR42_RS19360 5858c9b0186e14355cfee14b3c01b75c 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS19360 5858c9b0186e14355cfee14b3c01b75c 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS19360 5858c9b0186e14355cfee14b3c01b75c 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS19360 5858c9b0186e14355cfee14b3c01b75c 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS19360 5858c9b0186e14355cfee14b3c01b75c 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS19360 5858c9b0186e14355cfee14b3c01b75c 396 SUPERFAMILY SSF52540 6 221 1.76E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS19360 5858c9b0186e14355cfee14b3c01b75c 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 2.4E-58 T 23-04-2016 RR42_RS19360 5858c9b0186e14355cfee14b3c01b75c 396 Gene3D G3DSA:3.40.50.300 3 210 6.1E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS19360 5858c9b0186e14355cfee14b3c01b75c 396 SUPERFAMILY SSF50465 300 395 3.84E-36 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RR42_RS19360 5858c9b0186e14355cfee14b3c01b75c 396 SUPERFAMILY SSF50447 207 303 3.53E-30 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RR42_RS19360 5858c9b0186e14355cfee14b3c01b75c 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 3.7E-15 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RR42_RS19360 5858c9b0186e14355cfee14b3c01b75c 396 PANTHER PTHR23115:SF151 1 394 4.6E-262 T 23-04-2016 RR42_RS19360 5858c9b0186e14355cfee14b3c01b75c 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 1.9E-228 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 RR42_RS19360 5858c9b0186e14355cfee14b3c01b75c 396 Gene3D G3DSA:2.40.30.10 211 300 1.3E-35 T 23-04-2016 RR42_RS19360 5858c9b0186e14355cfee14b3c01b75c 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 2.1E-33 T 23-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RR42_RS19360 5858c9b0186e14355cfee14b3c01b75c 396 Pfam PF03144 Elongation factor Tu domain 2 227 296 1.4E-16 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RR42_RS19360 5858c9b0186e14355cfee14b3c01b75c 396 Gene3D G3DSA:2.40.30.10 302 395 1.5E-46 T 23-04-2016 RR42_RS19360 5858c9b0186e14355cfee14b3c01b75c 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.778 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 RR42_RS19360 5858c9b0186e14355cfee14b3c01b75c 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site RR42_RS19290 5858c9b0186e14355cfee14b3c01b75c 396 PANTHER PTHR23115 1 394 4.6E-262 T 23-04-2016 RR42_RS19290 5858c9b0186e14355cfee14b3c01b75c 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS19290 5858c9b0186e14355cfee14b3c01b75c 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS19290 5858c9b0186e14355cfee14b3c01b75c 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS19290 5858c9b0186e14355cfee14b3c01b75c 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS19290 5858c9b0186e14355cfee14b3c01b75c 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS19290 5858c9b0186e14355cfee14b3c01b75c 396 SUPERFAMILY SSF52540 6 221 1.76E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS19290 5858c9b0186e14355cfee14b3c01b75c 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 2.4E-58 T 23-04-2016 RR42_RS19290 5858c9b0186e14355cfee14b3c01b75c 396 Gene3D G3DSA:3.40.50.300 3 210 6.1E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS19290 5858c9b0186e14355cfee14b3c01b75c 396 SUPERFAMILY SSF50465 300 395 3.84E-36 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RR42_RS19290 5858c9b0186e14355cfee14b3c01b75c 396 SUPERFAMILY SSF50447 207 303 3.53E-30 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RR42_RS19290 5858c9b0186e14355cfee14b3c01b75c 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 3.7E-15 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RR42_RS19290 5858c9b0186e14355cfee14b3c01b75c 396 PANTHER PTHR23115:SF151 1 394 4.6E-262 T 23-04-2016 RR42_RS19290 5858c9b0186e14355cfee14b3c01b75c 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 1.9E-228 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 RR42_RS19290 5858c9b0186e14355cfee14b3c01b75c 396 Gene3D G3DSA:2.40.30.10 211 300 1.3E-35 T 23-04-2016 RR42_RS19290 5858c9b0186e14355cfee14b3c01b75c 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 2.1E-33 T 23-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RR42_RS19290 5858c9b0186e14355cfee14b3c01b75c 396 Pfam PF03144 Elongation factor Tu domain 2 227 296 1.4E-16 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RR42_RS19290 5858c9b0186e14355cfee14b3c01b75c 396 Gene3D G3DSA:2.40.30.10 302 395 1.5E-46 T 23-04-2016 RR42_RS19290 5858c9b0186e14355cfee14b3c01b75c 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.778 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 RR42_RS19290 5858c9b0186e14355cfee14b3c01b75c 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site RR42_RS09305 c608172c089a39302d7c032ea4b45950 298 SUPERFAMILY SSF53850 87 296 1.44E-51 T 23-04-2016 RR42_RS09305 c608172c089a39302d7c032ea4b45950 298 PANTHER PTHR30537:SF5 1 294 3.5E-120 T 23-04-2016 RR42_RS09305 c608172c089a39302d7c032ea4b45950 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 8.2E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS09305 c608172c089a39302d7c032ea4b45950 298 PANTHER PTHR30537 1 294 3.5E-120 T 23-04-2016 RR42_RS09305 c608172c089a39302d7c032ea4b45950 298 Pfam PF03466 LysR substrate binding domain 88 292 7.6E-48 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS09305 c608172c089a39302d7c032ea4b45950 298 SUPERFAMILY SSF46785 7 87 6.12E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS09305 c608172c089a39302d7c032ea4b45950 298 Gene3D G3DSA:1.10.10.10 7 83 3.0E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS09305 c608172c089a39302d7c032ea4b45950 298 Gene3D G3DSA:3.40.190.10 175 259 2.1E-25 T 23-04-2016 RR42_RS09305 c608172c089a39302d7c032ea4b45950 298 Gene3D G3DSA:3.40.190.10 90 174 8.3E-7 T 23-04-2016 RR42_RS10885 189a406d2d896b8e72dcea6290c38c93 264 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 RR42_RS10885 189a406d2d896b8e72dcea6290c38c93 264 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 256 2.7E-83 T 23-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 RR42_RS10885 189a406d2d896b8e72dcea6290c38c93 264 PANTHER PTHR10060:SF20 1 259 2.1E-118 T 23-04-2016 RR42_RS10885 189a406d2d896b8e72dcea6290c38c93 264 PANTHER PTHR10060 1 259 2.1E-118 T 23-04-2016 IPR001130 TatD family GO:0016788 RR42_RS10885 189a406d2d896b8e72dcea6290c38c93 264 Pfam PF01026 TatD related DNase 3 256 8.4E-77 T 23-04-2016 IPR001130 TatD family GO:0016788 RR42_RS10885 189a406d2d896b8e72dcea6290c38c93 264 SUPERFAMILY SSF51556 1 256 1.12E-87 T 23-04-2016 IPR032466 Metal-dependent hydrolase RR42_RS10885 189a406d2d896b8e72dcea6290c38c93 264 Gene3D G3DSA:3.20.20.140 1 256 1.0E-88 T 23-04-2016 RR42_RS10885 189a406d2d896b8e72dcea6290c38c93 264 PIRSF PIRSF005902 1 259 1.1E-78 T 23-04-2016 IPR001130 TatD family GO:0016788 RR42_RS05965 c1325045b1cc4cdfb4fd7535cc0c49a5 195 PANTHER PTHR23026 4 191 9.7E-80 T 23-04-2016 RR42_RS05965 c1325045b1cc4cdfb4fd7535cc0c49a5 195 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 1 195 45.701 T 23-04-2016 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 RR42_RS05965 c1325045b1cc4cdfb4fd7535cc0c49a5 195 Pfam PF00881 Nitroreductase family 17 173 3.0E-14 T 23-04-2016 IPR029479 Nitroreductase RR42_RS05965 c1325045b1cc4cdfb4fd7535cc0c49a5 195 PANTHER PTHR23026:SF110 4 191 9.7E-80 T 23-04-2016 RR42_RS05965 c1325045b1cc4cdfb4fd7535cc0c49a5 195 Gene3D G3DSA:3.40.109.10 4 193 8.6E-39 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 RR42_RS05965 c1325045b1cc4cdfb4fd7535cc0c49a5 195 SUPERFAMILY SSF55469 10 194 1.83E-40 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 RR42_RS16575 a3ea0fad1e0307accabe0bd694763108 409 SUPERFAMILY SSF56645 14 237 1.2E-60 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RR42_RS16575 a3ea0fad1e0307accabe0bd694763108 409 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 225 7.3E-25 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RR42_RS16575 a3ea0fad1e0307accabe0bd694763108 409 PIRSF PIRSF016578 8 396 6.8E-22 T 23-04-2016 RR42_RS16575 a3ea0fad1e0307accabe0bd694763108 409 Gene3D G3DSA:2.40.110.10 128 226 1.7E-34 T 23-04-2016 RR42_RS16575 a3ea0fad1e0307accabe0bd694763108 409 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 18 125 1.6E-14 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS16575 a3ea0fad1e0307accabe0bd694763108 409 Gene3D G3DSA:1.10.540.10 17 126 2.0E-18 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS16575 a3ea0fad1e0307accabe0bd694763108 409 Gene3D G3DSA:1.20.140.10 227 390 5.2E-60 T 23-04-2016 RR42_RS16575 a3ea0fad1e0307accabe0bd694763108 409 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 237 386 1.1E-43 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS16575 a3ea0fad1e0307accabe0bd694763108 409 PANTHER PTHR10909 17 393 2.1E-119 T 23-04-2016 RR42_RS16575 a3ea0fad1e0307accabe0bd694763108 409 SUPERFAMILY SSF47203 235 388 3.29E-50 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS13570 ec0ac8abc508e680596a4e931fb4fabb 267 Pfam PF00753 Metallo-beta-lactamase superfamily 14 178 3.8E-14 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS13570 ec0ac8abc508e680596a4e931fb4fabb 267 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 179 266 1.5E-25 T 23-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RR42_RS13570 ec0ac8abc508e680596a4e931fb4fabb 267 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 266 42.717 T 23-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RR42_RS13570 ec0ac8abc508e680596a4e931fb4fabb 267 Gene3D G3DSA:3.60.15.10 3 266 5.2E-82 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS13570 ec0ac8abc508e680596a4e931fb4fabb 267 PANTHER PTHR11935:SF7 1 267 2.5E-82 T 23-04-2016 RR42_RS13570 ec0ac8abc508e680596a4e931fb4fabb 267 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 5 266 8.7E-92 T 23-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RR42_RS13570 ec0ac8abc508e680596a4e931fb4fabb 267 PIRSF PIRSF005457 1 266 3.2E-94 T 23-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RR42_RS13570 ec0ac8abc508e680596a4e931fb4fabb 267 PANTHER PTHR11935 1 267 2.5E-82 T 23-04-2016 RR42_RS13570 ec0ac8abc508e680596a4e931fb4fabb 267 SUPERFAMILY SSF56281 2 266 2.38E-63 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS13570 ec0ac8abc508e680596a4e931fb4fabb 267 SMART SM00849 12 178 4.3E-26 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS18290 4ac3d2677b2b2b807561f81e8c935f10 243 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 77 203 2.6E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS18290 4ac3d2677b2b2b807561f81e8c935f10 243 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 17 238 8.2E-62 T 23-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 RR42_RS18290 4ac3d2677b2b2b807561f81e8c935f10 243 SUPERFAMILY SSF56784 11 238 2.04E-52 T 23-04-2016 IPR023214 HAD-like domain RR42_RS18290 4ac3d2677b2b2b807561f81e8c935f10 243 Gene3D G3DSA:3.40.50.1000 5 32 1.3E-41 T 23-04-2016 IPR023214 HAD-like domain RR42_RS18290 4ac3d2677b2b2b807561f81e8c935f10 243 Gene3D G3DSA:3.40.50.1000 96 238 1.3E-41 T 23-04-2016 IPR023214 HAD-like domain RR42_RS18290 4ac3d2677b2b2b807561f81e8c935f10 243 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 14 25 5.4E-8 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS18290 4ac3d2677b2b2b807561f81e8c935f10 243 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 169 5.4E-8 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS18290 4ac3d2677b2b2b807561f81e8c935f10 243 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 122 135 5.4E-8 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS18290 4ac3d2677b2b2b807561f81e8c935f10 243 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 198 211 5.4E-8 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS18290 4ac3d2677b2b2b807561f81e8c935f10 243 PANTHER PTHR18901 8 231 2.1E-44 T 23-04-2016 RR42_RS18290 4ac3d2677b2b2b807561f81e8c935f10 243 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 98 209 6.0E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS18290 4ac3d2677b2b2b807561f81e8c935f10 243 Pfam PF13419 Haloacid dehalogenase-like hydrolase 17 209 8.2E-31 T 23-04-2016 IPR023214 HAD-like domain RR42_RS18290 4ac3d2677b2b2b807561f81e8c935f10 243 Gene3D G3DSA:1.10.150.240 33 95 2.2E-8 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RR42_RS18040 7c8cb61b56a46fcf174eab5ce08b88f1 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 1.0E-107 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RR42_RS18040 7c8cb61b56a46fcf174eab5ce08b88f1 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 295 3.1E-121 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RR42_RS18040 7c8cb61b56a46fcf174eab5ce08b88f1 305 Gene3D G3DSA:3.30.230.20 3 125 2.8E-44 T 23-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RR42_RS18040 7c8cb61b56a46fcf174eab5ce08b88f1 305 Gene3D G3DSA:3.30.1700.10 128 282 9.9E-60 T 23-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RR42_RS18040 7c8cb61b56a46fcf174eab5ce08b88f1 305 SUPERFAMILY SSF54211 3 125 6.07E-41 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RR42_RS18040 7c8cb61b56a46fcf174eab5ce08b88f1 305 SUPERFAMILY SSF54211 133 277 1.44E-51 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RR42_RS18040 7c8cb61b56a46fcf174eab5ce08b88f1 305 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 280 49.366 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RR42_RS18040 7c8cb61b56a46fcf174eab5ce08b88f1 305 PANTHER PTHR33694:SF1 1 305 1.9E-132 T 23-04-2016 RR42_RS18040 7c8cb61b56a46fcf174eab5ce08b88f1 305 PANTHER PTHR33694 1 305 1.9E-132 T 23-04-2016 RR42_RS12540 0fc25c50437744b797820e33ca5fd138 436 Gene3D G3DSA:3.30.360.10 149 299 2.7E-57 T 23-04-2016 RR42_RS12540 0fc25c50437744b797820e33ca5fd138 436 PANTHER PTHR21499:SF2 4 373 1.3E-130 T 23-04-2016 RR42_RS12540 0fc25c50437744b797820e33ca5fd138 436 Gene3D G3DSA:3.30.70.260 353 425 1.0E-10 T 23-04-2016 RR42_RS12540 0fc25c50437744b797820e33ca5fd138 436 PANTHER PTHR21499 4 373 1.3E-130 T 23-04-2016 RR42_RS12540 0fc25c50437744b797820e33ca5fd138 436 SUPERFAMILY SSF55021 352 423 1.81E-12 T 23-04-2016 RR42_RS12540 0fc25c50437744b797820e33ca5fd138 436 Gene3D G3DSA:3.40.50.720 1 148 2.8E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS12540 0fc25c50437744b797820e33ca5fd138 436 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 3.6E-22 T 23-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 RR42_RS12540 0fc25c50437744b797820e33ca5fd138 436 SUPERFAMILY SSF51735 1 158 3.16E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS12540 0fc25c50437744b797820e33ca5fd138 436 PIRSF PIRSF000098 1 435 4.1E-164 T 23-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 RR42_RS12540 0fc25c50437744b797820e33ca5fd138 436 Pfam PF01842 ACT domain 354 421 1.1E-14 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RR42_RS12540 0fc25c50437744b797820e33ca5fd138 436 Pfam PF00742 Homoserine dehydrogenase 137 315 6.6E-64 T 23-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 RR42_RS12540 0fc25c50437744b797820e33ca5fd138 436 SUPERFAMILY SSF55347 137 302 9.15E-53 T 23-04-2016 RR42_RS12540 0fc25c50437744b797820e33ca5fd138 436 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 23-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 RR42_RS09710 07f2c5ea90426d4a8c1bd247eb6774b6 371 SUPERFAMILY SSF141868 124 368 3.66E-61 T 23-04-2016 IPR001633 EAL domain RR42_RS09710 07f2c5ea90426d4a8c1bd247eb6774b6 371 Gene3D G3DSA:3.40.50.2300 5 105 2.9E-7 T 23-04-2016 RR42_RS09710 07f2c5ea90426d4a8c1bd247eb6774b6 371 SMART SM00052 118 363 6.1E-52 T 23-04-2016 IPR001633 EAL domain RR42_RS09710 07f2c5ea90426d4a8c1bd247eb6774b6 371 Gene3D G3DSA:3.20.20.450 124 369 3.2E-61 T 23-04-2016 IPR001633 EAL domain RR42_RS09710 07f2c5ea90426d4a8c1bd247eb6774b6 371 Pfam PF00563 EAL domain 124 357 1.5E-54 T 23-04-2016 IPR001633 EAL domain RR42_RS09710 07f2c5ea90426d4a8c1bd247eb6774b6 371 PANTHER PTHR33121 125 369 4.1E-48 T 23-04-2016 RR42_RS09710 07f2c5ea90426d4a8c1bd247eb6774b6 371 SUPERFAMILY SSF52172 7 118 2.2E-8 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS09710 07f2c5ea90426d4a8c1bd247eb6774b6 371 PANTHER PTHR33121:SF13 125 369 4.1E-48 T 23-04-2016 RR42_RS07505 1e043c291b6b14fa7ccc41fea66afa73 485 TIGRFAM TIGR03225 benzo_boxB: benzoyl-CoA oxygenase, B subunit 14 484 1.2E-269 T 23-04-2016 IPR017635 Benzoyl-CoA oxygenase, B subunit KEGG: 00361+1.14.13.20|MetaCyc: PWY-6085|MetaCyc: PWY-6086 RR42_RS07505 1e043c291b6b14fa7ccc41fea66afa73 485 PANTHER PTHR30458 78 276 5.5E-98 T 23-04-2016 RR42_RS07505 1e043c291b6b14fa7ccc41fea66afa73 485 PANTHER PTHR30458 366 485 5.5E-98 T 23-04-2016 RR42_RS07505 1e043c291b6b14fa7ccc41fea66afa73 485 PANTHER PTHR30458 296 328 5.5E-98 T 23-04-2016 RR42_RS07505 1e043c291b6b14fa7ccc41fea66afa73 485 SUPERFAMILY SSF47240 117 338 4.33E-49 T 23-04-2016 IPR009078 Ferritin-like superfamily RR42_RS07505 1e043c291b6b14fa7ccc41fea66afa73 485 Gene3D G3DSA:1.20.1260.10 112 272 5.1E-7 T 23-04-2016 IPR012347 Ferritin-related RR42_RS07505 1e043c291b6b14fa7ccc41fea66afa73 485 PANTHER PTHR30458:SF0 78 276 5.5E-98 T 23-04-2016 RR42_RS07505 1e043c291b6b14fa7ccc41fea66afa73 485 PANTHER PTHR30458:SF0 366 485 5.5E-98 T 23-04-2016 RR42_RS07505 1e043c291b6b14fa7ccc41fea66afa73 485 PANTHER PTHR30458:SF0 296 328 5.5E-98 T 23-04-2016 RR42_RS14570 d90c8d625549c7c6d6f77835b53af6fe 238 SMART SM00863 190 233 8.1E-13 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RR42_RS14570 d90c8d625549c7c6d6f77835b53af6fe 238 Pfam PF01411 tRNA synthetases class II (A) 18 97 2.7E-7 T 23-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 RR42_RS14570 d90c8d625549c7c6d6f77835b53af6fe 238 PANTHER PTHR11777 1 233 2.8E-44 T 23-04-2016 RR42_RS14570 d90c8d625549c7c6d6f77835b53af6fe 238 SUPERFAMILY SSF50447 3 93 3.21E-12 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RR42_RS14570 d90c8d625549c7c6d6f77835b53af6fe 238 SUPERFAMILY SSF55186 97 234 8.37E-29 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 RR42_RS14570 d90c8d625549c7c6d6f77835b53af6fe 238 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 190 233 1.1E-10 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RR42_RS17190 fa203100c225ad53421a8438d017c89c 517 Pfam PF03023 MviN-like protein 28 474 5.2E-139 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RR42_RS17190 fa203100c225ad53421a8438d017c89c 517 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 506 5.7E-144 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RR42_RS17190 fa203100c225ad53421a8438d017c89c 517 PANTHER PTHR11206:SF90 67 85 2.4E-77 T 23-04-2016 RR42_RS17190 fa203100c225ad53421a8438d017c89c 517 PANTHER PTHR11206:SF90 226 447 2.4E-77 T 23-04-2016 RR42_RS17190 fa203100c225ad53421a8438d017c89c 517 PANTHER PTHR11206:SF90 468 499 2.4E-77 T 23-04-2016 RR42_RS17190 fa203100c225ad53421a8438d017c89c 517 PANTHER PTHR11206 67 85 2.4E-77 T 23-04-2016 RR42_RS17190 fa203100c225ad53421a8438d017c89c 517 PANTHER PTHR11206 226 447 2.4E-77 T 23-04-2016 RR42_RS17190 fa203100c225ad53421a8438d017c89c 517 PANTHER PTHR11206 468 499 2.4E-77 T 23-04-2016 RR42_RS17190 fa203100c225ad53421a8438d017c89c 517 PRINTS PR01806 Virulence factor MviN signature 264 290 4.0E-79 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RR42_RS17190 fa203100c225ad53421a8438d017c89c 517 PRINTS PR01806 Virulence factor MviN signature 362 381 4.0E-79 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RR42_RS17190 fa203100c225ad53421a8438d017c89c 517 PRINTS PR01806 Virulence factor MviN signature 134 158 4.0E-79 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RR42_RS17190 fa203100c225ad53421a8438d017c89c 517 PRINTS PR01806 Virulence factor MviN signature 52 68 4.0E-79 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RR42_RS17190 fa203100c225ad53421a8438d017c89c 517 PRINTS PR01806 Virulence factor MviN signature 33 52 4.0E-79 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RR42_RS17190 fa203100c225ad53421a8438d017c89c 517 PRINTS PR01806 Virulence factor MviN signature 414 431 4.0E-79 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RR42_RS17190 fa203100c225ad53421a8438d017c89c 517 PRINTS PR01806 Virulence factor MviN signature 158 179 4.0E-79 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RR42_RS17190 fa203100c225ad53421a8438d017c89c 517 PIRSF PIRSF002869 1 516 1.5E-157 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RR42_RS15930 8dbf38e4022e829c6f4b43f30ea53c75 180 PANTHER PTHR35011:SF4 4 180 3.7E-69 T 23-04-2016 RR42_RS15930 8dbf38e4022e829c6f4b43f30ea53c75 180 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 162 7.9E-29 T 23-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RR42_RS15930 8dbf38e4022e829c6f4b43f30ea53c75 180 PANTHER PTHR35011 4 180 3.7E-69 T 23-04-2016 RR42_RS20055 9e5acb6b3cd12fc5bb360bdaf1575072 701 Pfam PF13361 UvrD-like helicase C-terminal domain 282 642 3.7E-60 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RR42_RS20055 9e5acb6b3cd12fc5bb360bdaf1575072 701 Gene3D G3DSA:1.10.10.160 118 188 2.7E-16 T 23-04-2016 IPR013986 DExx box DNA helicase domain RR42_RS20055 9e5acb6b3cd12fc5bb360bdaf1575072 701 Gene3D G3DSA:1.10.486.10 394 535 4.7E-35 T 23-04-2016 RR42_RS20055 9e5acb6b3cd12fc5bb360bdaf1575072 701 Pfam PF00580 UvrD/REP helicase N-terminal domain 5 276 1.8E-69 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RR42_RS20055 9e5acb6b3cd12fc5bb360bdaf1575072 701 SUPERFAMILY SSF52540 3 663 4.36E-153 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20055 9e5acb6b3cd12fc5bb360bdaf1575072 701 PANTHER PTHR11070 1 522 4.3E-275 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RR42_RS20055 9e5acb6b3cd12fc5bb360bdaf1575072 701 PANTHER PTHR11070 553 662 4.3E-275 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RR42_RS20055 9e5acb6b3cd12fc5bb360bdaf1575072 701 PANTHER PTHR11070:SF19 1 522 4.3E-275 T 23-04-2016 RR42_RS20055 9e5acb6b3cd12fc5bb360bdaf1575072 701 PANTHER PTHR11070:SF19 553 662 4.3E-275 T 23-04-2016 RR42_RS20055 9e5acb6b3cd12fc5bb360bdaf1575072 701 Gene3D G3DSA:3.40.50.300 3 114 8.8E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20055 9e5acb6b3cd12fc5bb360bdaf1575072 701 Gene3D G3DSA:3.40.50.300 189 290 8.8E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20055 9e5acb6b3cd12fc5bb360bdaf1575072 701 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 3 691 38.295 T 23-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 RR42_RS20055 9e5acb6b3cd12fc5bb360bdaf1575072 701 Gene3D G3DSA:3.40.50.300 291 393 4.4E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20055 9e5acb6b3cd12fc5bb360bdaf1575072 701 Gene3D G3DSA:3.40.50.300 576 665 4.4E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04745 b4853fc4998d06e7e0dac71c04525155 216 PANTHER PTHR10285 14 204 3.2E-80 T 23-04-2016 RR42_RS04745 b4853fc4998d06e7e0dac71c04525155 216 Pfam PF14681 Uracil phosphoribosyltransferase 13 214 2.9E-68 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS04745 b4853fc4998d06e7e0dac71c04525155 216 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 9 215 43.524 T 23-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 RR42_RS04745 b4853fc4998d06e7e0dac71c04525155 216 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 10 215 1.7E-76 T 23-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 RR42_RS04745 b4853fc4998d06e7e0dac71c04525155 216 SUPERFAMILY SSF53271 10 213 8.43E-60 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS04745 b4853fc4998d06e7e0dac71c04525155 216 Gene3D G3DSA:3.40.50.2020 10 215 1.2E-72 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS10445 6ed192d7fee60cc2b44b0de783ca3d96 146 SUPERFAMILY SSF49764 6 145 3.66E-34 T 23-04-2016 IPR008978 HSP20-like chaperone RR42_RS10445 6ed192d7fee60cc2b44b0de783ca3d96 146 Pfam PF00011 Hsp20/alpha crystallin family 48 146 5.2E-19 T 23-04-2016 IPR002068 Alpha crystallin/Hsp20 domain RR42_RS10445 6ed192d7fee60cc2b44b0de783ca3d96 146 PANTHER PTHR11527 9 146 4.0E-24 T 23-04-2016 IPR031107 Small heat shock protein HSP20 RR42_RS10445 6ed192d7fee60cc2b44b0de783ca3d96 146 PANTHER PTHR11527:SF122 9 146 4.0E-24 T 23-04-2016 RR42_RS10445 6ed192d7fee60cc2b44b0de783ca3d96 146 Gene3D G3DSA:2.60.40.790 8 146 1.2E-34 T 23-04-2016 IPR008978 HSP20-like chaperone RR42_RS04725 ee7a378a387875135755ce8bfc977db9 303 PANTHER PTHR10755 7 303 1.6E-160 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RR42_RS04725 ee7a378a387875135755ce8bfc977db9 303 Pfam PF01218 Coproporphyrinogen III oxidase 7 302 2.9E-122 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RR42_RS04725 ee7a378a387875135755ce8bfc977db9 303 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 167 191 - T 23-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RR42_RS04725 ee7a378a387875135755ce8bfc977db9 303 PRINTS PR00073 Coprogen oxidase signature 263 289 7.9E-64 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RR42_RS04725 ee7a378a387875135755ce8bfc977db9 303 PRINTS PR00073 Coprogen oxidase signature 126 148 7.9E-64 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RR42_RS04725 ee7a378a387875135755ce8bfc977db9 303 PRINTS PR00073 Coprogen oxidase signature 28 44 7.9E-64 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RR42_RS04725 ee7a378a387875135755ce8bfc977db9 303 PRINTS PR00073 Coprogen oxidase signature 163 192 7.9E-64 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RR42_RS04725 ee7a378a387875135755ce8bfc977db9 303 PRINTS PR00073 Coprogen oxidase signature 91 115 7.9E-64 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RR42_RS04725 ee7a378a387875135755ce8bfc977db9 303 PRINTS PR00073 Coprogen oxidase signature 235 262 7.9E-64 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RR42_RS04725 ee7a378a387875135755ce8bfc977db9 303 Gene3D G3DSA:3.40.1500.10 4 303 4.4E-125 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RR42_RS04725 ee7a378a387875135755ce8bfc977db9 303 PIRSF PIRSF000166 2 303 5.1E-118 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RR42_RS04725 ee7a378a387875135755ce8bfc977db9 303 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 1 278 53.958 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RR42_RS04725 ee7a378a387875135755ce8bfc977db9 303 SUPERFAMILY SSF102886 5 302 2.49E-129 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RR42_RS13785 77aa4b0a998ae947158cf71e89e02cc5 368 SMART SM00382 33 217 1.3E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS13785 77aa4b0a998ae947158cf71e89e02cc5 368 Pfam PF00005 ABC transporter 27 167 2.0E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS13785 77aa4b0a998ae947158cf71e89e02cc5 368 Gene3D G3DSA:3.40.50.300 8 240 7.3E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13785 77aa4b0a998ae947158cf71e89e02cc5 368 SUPERFAMILY SSF50331 242 357 1.84E-12 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RR42_RS13785 77aa4b0a998ae947158cf71e89e02cc5 368 Pfam PF08402 TOBE domain 284 353 2.0E-5 T 23-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 RR42_RS13785 77aa4b0a998ae947158cf71e89e02cc5 368 PANTHER PTHR24220 23 293 6.4E-81 T 23-04-2016 RR42_RS13785 77aa4b0a998ae947158cf71e89e02cc5 368 PANTHER PTHR24220:SF151 23 293 6.4E-81 T 23-04-2016 RR42_RS13785 77aa4b0a998ae947158cf71e89e02cc5 368 SUPERFAMILY SSF52540 20 248 7.42E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS06460 4373abfdd42565dcc31a0de1014db229 274 PANTHER PTHR10992 27 146 2.2E-41 T 23-04-2016 RR42_RS06460 4373abfdd42565dcc31a0de1014db229 274 PANTHER PTHR10992 163 269 2.2E-41 T 23-04-2016 RR42_RS06460 4373abfdd42565dcc31a0de1014db229 274 Pfam PF12146 Serine aminopeptidase, S33 27 241 1.2E-21 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 RR42_RS06460 4373abfdd42565dcc31a0de1014db229 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 3.2E-7 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS06460 4373abfdd42565dcc31a0de1014db229 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 3.2E-7 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS06460 4373abfdd42565dcc31a0de1014db229 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 3.2E-7 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS06460 4373abfdd42565dcc31a0de1014db229 274 SUPERFAMILY SSF53474 4 266 3.75E-50 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS06460 4373abfdd42565dcc31a0de1014db229 274 Gene3D G3DSA:3.40.50.1820 10 269 1.7E-49 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS06460 4373abfdd42565dcc31a0de1014db229 274 PRINTS PR00412 Epoxide hydrolase signature 50 65 4.4E-11 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS06460 4373abfdd42565dcc31a0de1014db229 274 PRINTS PR00412 Epoxide hydrolase signature 244 266 4.4E-11 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS06460 4373abfdd42565dcc31a0de1014db229 274 PRINTS PR00412 Epoxide hydrolase signature 108 121 4.4E-11 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS06460 4373abfdd42565dcc31a0de1014db229 274 PRINTS PR00412 Epoxide hydrolase signature 94 107 4.4E-11 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS06460 4373abfdd42565dcc31a0de1014db229 274 PRINTS PR00412 Epoxide hydrolase signature 212 228 4.4E-11 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS06290 d34c8baea3d31a2d1f3a4d1396fcbfae 141 SUPERFAMILY SSF52402 3 141 6.7E-27 T 23-04-2016 RR42_RS06290 d34c8baea3d31a2d1f3a4d1396fcbfae 141 Pfam PF00582 Universal stress protein family 3 141 5.4E-23 T 23-04-2016 IPR006016 UspA GO:0006950 RR42_RS06290 d34c8baea3d31a2d1f3a4d1396fcbfae 141 Gene3D G3DSA:3.40.50.620 3 141 1.4E-28 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS06290 d34c8baea3d31a2d1f3a4d1396fcbfae 141 PANTHER PTHR31964 3 141 2.2E-21 T 23-04-2016 RR42_RS06290 d34c8baea3d31a2d1f3a4d1396fcbfae 141 PRINTS PR01438 Universal stress protein signature 101 113 9.0E-10 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS06290 d34c8baea3d31a2d1f3a4d1396fcbfae 141 PRINTS PR01438 Universal stress protein signature 1 11 9.0E-10 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS06290 d34c8baea3d31a2d1f3a4d1396fcbfae 141 PRINTS PR01438 Universal stress protein signature 119 141 9.0E-10 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS06815 248ac48ac345d47955395e9ae42108e3 191 Gene3D G3DSA:1.10.260.40 4 81 7.1E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS06815 248ac48ac345d47955395e9ae42108e3 191 SUPERFAMILY SSF47413 3 64 2.28E-6 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS18585 bb68c8abb9b8b46a7a1da17ac671baef 577 Pfam PF00920 Dehydratase family 44 559 1.4E-180 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RR42_RS18585 bb68c8abb9b8b46a7a1da17ac671baef 577 SUPERFAMILY SSF143975 10 376 1.96E-123 T 23-04-2016 RR42_RS18585 bb68c8abb9b8b46a7a1da17ac671baef 577 SUPERFAMILY SSF52016 379 564 3.06E-58 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RR42_RS18585 bb68c8abb9b8b46a7a1da17ac671baef 577 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 127 137 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RR42_RS18585 bb68c8abb9b8b46a7a1da17ac671baef 577 PANTHER PTHR21000 11 577 5.3E-281 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RR42_RS18585 bb68c8abb9b8b46a7a1da17ac671baef 577 PANTHER PTHR21000:SF14 11 577 5.3E-281 T 23-04-2016 RR42_RS27815 9c8361011745c0b7d35f3b9bb263a1f5 343 Gene3D G3DSA:3.90.226.10 4 228 3.6E-36 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS27815 9c8361011745c0b7d35f3b9bb263a1f5 343 SUPERFAMILY SSF52096 13 234 1.97E-33 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS27815 9c8361011745c0b7d35f3b9bb263a1f5 343 PANTHER PTHR11941 2 234 2.6E-25 T 23-04-2016 RR42_RS27815 9c8361011745c0b7d35f3b9bb263a1f5 343 Pfam PF00378 Enoyl-CoA hydratase/isomerase 46 234 3.6E-22 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RR42_RS27815 9c8361011745c0b7d35f3b9bb263a1f5 343 PANTHER PTHR11941:SF54 2 234 2.6E-25 T 23-04-2016 RR42_RS13155 bb0a73e15bec0cf8660e5775da168dd4 384 PANTHER PTHR30544 6 360 1.2E-166 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RR42_RS13155 bb0a73e15bec0cf8660e5775da168dd4 384 PIRSF PIRSF006004 3 365 1.0E-147 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RR42_RS13155 bb0a73e15bec0cf8660e5775da168dd4 384 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 5 357 1.6E-138 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RR42_RS13155 bb0a73e15bec0cf8660e5775da168dd4 384 Pfam PF04055 Radical SAM superfamily 108 286 4.1E-16 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RR42_RS13155 bb0a73e15bec0cf8660e5775da168dd4 384 SUPERFAMILY SSF102114 104 320 4.19E-13 T 23-04-2016 RR42_RS13155 bb0a73e15bec0cf8660e5775da168dd4 384 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 4 353 73.313 T 23-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RR42_RS13155 bb0a73e15bec0cf8660e5775da168dd4 384 Gene3D G3DSA:3.20.20.70 104 334 1.6E-12 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS13155 bb0a73e15bec0cf8660e5775da168dd4 384 PANTHER PTHR30544:SF5 6 360 1.2E-166 T 23-04-2016 RR42_RS11255 82493b0d4d2b05f66644373b23197f7d 653 Gene3D G3DSA:1.10.10.60 617 651 1.7E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS11255 82493b0d4d2b05f66644373b23197f7d 653 Gene3D G3DSA:1.10.8.60 489 565 6.6E-22 T 23-04-2016 RR42_RS11255 82493b0d4d2b05f66644373b23197f7d 653 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 530 539 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RR42_RS11255 82493b0d4d2b05f66644373b23197f7d 653 Pfam PF08448 PAS fold 194 246 8.3E-7 T 23-04-2016 IPR013656 PAS fold-4 RR42_RS11255 82493b0d4d2b05f66644373b23197f7d 653 SUPERFAMILY SSF55785 188 277 4.19E-12 T 23-04-2016 IPR000014 PAS domain RR42_RS11255 82493b0d4d2b05f66644373b23197f7d 653 SUPERFAMILY SSF52540 314 560 8.96E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11255 82493b0d4d2b05f66644373b23197f7d 653 SMART SM00382 335 480 7.5E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS11255 82493b0d4d2b05f66644373b23197f7d 653 Gene3D G3DSA:3.40.50.2300 1 82 3.6E-34 T 23-04-2016 RR42_RS11255 82493b0d4d2b05f66644373b23197f7d 653 Pfam PF06506 Propionate catabolism activator 18 182 6.4E-45 T 23-04-2016 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 RR42_RS11255 82493b0d4d2b05f66644373b23197f7d 653 PANTHER PTHR32071 295 651 1.1E-140 T 23-04-2016 RR42_RS11255 82493b0d4d2b05f66644373b23197f7d 653 Gene3D G3DSA:3.30.450.20 190 300 1.9E-12 T 23-04-2016 RR42_RS11255 82493b0d4d2b05f66644373b23197f7d 653 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 402 417 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RR42_RS11255 82493b0d4d2b05f66644373b23197f7d 653 Gene3D G3DSA:3.40.50.300 313 488 4.8E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11255 82493b0d4d2b05f66644373b23197f7d 653 SUPERFAMILY SSF46689 602 651 1.72E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS11255 82493b0d4d2b05f66644373b23197f7d 653 SUPERFAMILY SSF46689 530 573 1.72E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS11255 82493b0d4d2b05f66644373b23197f7d 653 Gene3D G3DSA:3.40.50.10660 83 161 3.4E-31 T 23-04-2016 RR42_RS11255 82493b0d4d2b05f66644373b23197f7d 653 SMART SM00091 188 254 6.3E-6 T 23-04-2016 IPR000014 PAS domain RR42_RS11255 82493b0d4d2b05f66644373b23197f7d 653 Pfam PF00158 Sigma-54 interaction domain 316 482 6.2E-66 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RR42_RS11255 82493b0d4d2b05f66644373b23197f7d 653 TIGRFAM TIGR02329 propionate_PrpR: propionate catabolism operon regulatory protein PrpR 1 650 7.4E-177 T 23-04-2016 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0005737|GO:0019629 RR42_RS11255 82493b0d4d2b05f66644373b23197f7d 653 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 339 352 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RR42_RS11255 82493b0d4d2b05f66644373b23197f7d 653 SUPERFAMILY SSF159800 2 178 9.15E-43 T 23-04-2016 RR42_RS11255 82493b0d4d2b05f66644373b23197f7d 653 Pfam PF02954 Bacterial regulatory protein, Fis family 617 651 9.5E-11 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS06610 4e3e15af5bc6929767dd56915a9dc55a 65 PANTHER PTHR33343 1 65 2.5E-22 T 23-04-2016 RR42_RS06610 4e3e15af5bc6929767dd56915a9dc55a 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.545 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RR42_RS06610 4e3e15af5bc6929767dd56915a9dc55a 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 23-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS06610 4e3e15af5bc6929767dd56915a9dc55a 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 4.7E-24 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RR42_RS06610 4e3e15af5bc6929767dd56915a9dc55a 65 Pfam PF01632 Ribosomal protein L35 2 62 1.0E-22 T 23-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS06610 4e3e15af5bc6929767dd56915a9dc55a 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 5.9E-15 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RR42_RS06610 4e3e15af5bc6929767dd56915a9dc55a 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 5.9E-15 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RR42_RS06610 4e3e15af5bc6929767dd56915a9dc55a 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 5.9E-15 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RR42_RS06610 4e3e15af5bc6929767dd56915a9dc55a 65 SUPERFAMILY SSF143034 2 64 3.79E-22 T 23-04-2016 RR42_RS20170 706948ff763b94e1f66c4c0f725c674f 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RR42_RS20170 706948ff763b94e1f66c4c0f725c674f 513 Gene3D G3DSA:1.20.150.20 383 510 8.8E-49 T 23-04-2016 RR42_RS20170 706948ff763b94e1f66c4c0f725c674f 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 2.6E-16 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RR42_RS20170 706948ff763b94e1f66c4c0f725c674f 513 SUPERFAMILY SSF47917 383 510 1.65E-46 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RR42_RS20170 706948ff763b94e1f66c4c0f725c674f 513 PIRSF PIRSF039088 1 513 3.9E-240 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RR42_RS20170 706948ff763b94e1f66c4c0f725c674f 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.554 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RR42_RS20170 706948ff763b94e1f66c4c0f725c674f 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 511 2.0E-249 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RR42_RS20170 706948ff763b94e1f66c4c0f725c674f 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 2.1E-45 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RR42_RS20170 706948ff763b94e1f66c4c0f725c674f 513 Gene3D G3DSA:3.40.50.300 94 382 1.7E-116 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20170 706948ff763b94e1f66c4c0f725c674f 513 PANTHER PTHR15184:SF3 1 496 7.5E-294 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RR42_RS20170 706948ff763b94e1f66c4c0f725c674f 513 SUPERFAMILY SSF50615 10 94 2.94E-29 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RR42_RS20170 706948ff763b94e1f66c4c0f725c674f 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 1.5E-74 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RR42_RS20170 706948ff763b94e1f66c4c0f725c674f 513 PANTHER PTHR15184 1 496 7.5E-294 T 23-04-2016 RR42_RS20170 706948ff763b94e1f66c4c0f725c674f 513 SUPERFAMILY SSF52540 96 381 2.0E-95 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20170 706948ff763b94e1f66c4c0f725c674f 513 Gene3D G3DSA:2.40.30.20 1 93 1.8E-34 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RR42_RS04800 b98bcf557cd824cf8f9ea50409665976 529 Pfam PF00005 ABC transporter 25 180 3.2E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS04800 b98bcf557cd824cf8f9ea50409665976 529 Pfam PF00005 ABC transporter 285 440 4.8E-10 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS04800 b98bcf557cd824cf8f9ea50409665976 529 SUPERFAMILY SSF52540 8 237 9.23E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04800 b98bcf557cd824cf8f9ea50409665976 529 SUPERFAMILY SSF52540 282 498 4.24E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04800 b98bcf557cd824cf8f9ea50409665976 529 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS04800 b98bcf557cd824cf8f9ea50409665976 529 ProSitePatterns PS00211 ABC transporters family signature. 413 427 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS04800 b98bcf557cd824cf8f9ea50409665976 529 SMART SM00382 33 230 4.0E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS04800 b98bcf557cd824cf8f9ea50409665976 529 PANTHER PTHR24220 10 393 3.3E-152 T 23-04-2016 RR42_RS04800 b98bcf557cd824cf8f9ea50409665976 529 Gene3D G3DSA:3.40.50.300 284 502 1.3E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04800 b98bcf557cd824cf8f9ea50409665976 529 Gene3D G3DSA:3.40.50.300 6 237 2.8E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04800 b98bcf557cd824cf8f9ea50409665976 529 PANTHER PTHR24220:SF239 10 393 3.3E-152 T 23-04-2016 RR42_RS10125 00a03d7390cafb65808e4ca615d4b914 1043 SMART SM00052 774 1020 4.8E-112 T 23-04-2016 IPR001633 EAL domain RR42_RS10125 00a03d7390cafb65808e4ca615d4b914 1043 Pfam PF03924 CHASE domain 74 261 1.5E-47 T 23-04-2016 IPR006189 CHASE domain RR42_RS10125 00a03d7390cafb65808e4ca615d4b914 1043 SUPERFAMILY SSF55073 603 766 8.63E-44 T 23-04-2016 IPR029787 Nucleotide cyclase RR42_RS10125 00a03d7390cafb65808e4ca615d4b914 1043 SMART SM00091 473 539 0.0029 T 23-04-2016 IPR000014 PAS domain RR42_RS10125 00a03d7390cafb65808e4ca615d4b914 1043 SMART SM00091 350 418 0.43 T 23-04-2016 IPR000014 PAS domain RR42_RS10125 00a03d7390cafb65808e4ca615d4b914 1043 Gene3D G3DSA:3.30.450.20 344 464 1.3E-14 T 23-04-2016 RR42_RS10125 00a03d7390cafb65808e4ca615d4b914 1043 SUPERFAMILY SSF141868 780 1027 9.81E-89 T 23-04-2016 IPR001633 EAL domain RR42_RS10125 00a03d7390cafb65808e4ca615d4b914 1043 PANTHER PTHR33121 709 1036 1.0E-84 T 23-04-2016 RR42_RS10125 00a03d7390cafb65808e4ca615d4b914 1043 PANTHER PTHR33121:SF13 709 1036 1.0E-84 T 23-04-2016 RR42_RS10125 00a03d7390cafb65808e4ca615d4b914 1043 Pfam PF00563 EAL domain 782 1015 3.7E-69 T 23-04-2016 IPR001633 EAL domain RR42_RS10125 00a03d7390cafb65808e4ca615d4b914 1043 Gene3D G3DSA:3.30.70.270 600 770 2.7E-52 T 23-04-2016 RR42_RS10125 00a03d7390cafb65808e4ca615d4b914 1043 Gene3D G3DSA:3.20.20.450 778 1026 5.8E-95 T 23-04-2016 IPR001633 EAL domain RR42_RS10125 00a03d7390cafb65808e4ca615d4b914 1043 Gene3D G3DSA:3.30.450.20 484 586 2.3E-27 T 23-04-2016 RR42_RS10125 00a03d7390cafb65808e4ca615d4b914 1043 SMART SM01079 71 263 3.9E-58 T 23-04-2016 IPR006189 CHASE domain RR42_RS10125 00a03d7390cafb65808e4ca615d4b914 1043 Pfam PF08447 PAS fold 375 449 4.0E-9 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 RR42_RS10125 00a03d7390cafb65808e4ca615d4b914 1043 SMART SM00086 545 587 2.3E-6 T 23-04-2016 IPR001610 PAC motif RR42_RS10125 00a03d7390cafb65808e4ca615d4b914 1043 SMART SM00086 424 466 6.9E-5 T 23-04-2016 IPR001610 PAC motif RR42_RS10125 00a03d7390cafb65808e4ca615d4b914 1043 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 596 762 4.9E-41 T 23-04-2016 IPR000160 GGDEF domain RR42_RS10125 00a03d7390cafb65808e4ca615d4b914 1043 SMART SM00267 587 764 1.9E-55 T 23-04-2016 IPR000160 GGDEF domain RR42_RS10125 00a03d7390cafb65808e4ca615d4b914 1043 Pfam PF13426 PAS domain 484 586 4.6E-16 T 23-04-2016 IPR000014 PAS domain RR42_RS10125 00a03d7390cafb65808e4ca615d4b914 1043 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 481 593 1.0E-18 T 23-04-2016 IPR000014 PAS domain RR42_RS10125 00a03d7390cafb65808e4ca615d4b914 1043 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 346 472 3.1E-8 T 23-04-2016 IPR000014 PAS domain RR42_RS10125 00a03d7390cafb65808e4ca615d4b914 1043 SUPERFAMILY SSF55785 344 464 3.7E-15 T 23-04-2016 IPR000014 PAS domain RR42_RS10125 00a03d7390cafb65808e4ca615d4b914 1043 Pfam PF00990 Diguanylate cyclase, GGDEF domain 598 760 5.6E-45 T 23-04-2016 IPR000160 GGDEF domain RR42_RS10125 00a03d7390cafb65808e4ca615d4b914 1043 SUPERFAMILY SSF55785 484 584 2.26E-27 T 23-04-2016 IPR000014 PAS domain RR42_RS18045 84d4b40197bcbc89f109d3ac15124406 168 SUPERFAMILY SSF52833 1 166 9.86E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS18045 84d4b40197bcbc89f109d3ac15124406 168 Pfam PF08534 Redoxin 5 163 7.4E-35 T 23-04-2016 IPR013740 Redoxin GO:0016491 RR42_RS18045 84d4b40197bcbc89f109d3ac15124406 168 PANTHER PTHR10430 2 167 1.9E-74 T 23-04-2016 RR42_RS18045 84d4b40197bcbc89f109d3ac15124406 168 Gene3D G3DSA:3.40.30.10 1 167 3.2E-57 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS11610 c1fe350813d931448822c13049a12a2d 763 PANTHER PTHR30480 407 716 5.1E-90 T 23-04-2016 RR42_RS11610 c1fe350813d931448822c13049a12a2d 763 Pfam PF07075 Protein of unknown function (DUF1343) 412 763 1.1E-107 T 23-04-2016 IPR008302 Uncharacterised conserved protein UCP016719 RR42_RS11610 c1fe350813d931448822c13049a12a2d 763 SUPERFAMILY SSF56601 10 356 5.28E-80 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS11610 c1fe350813d931448822c13049a12a2d 763 Gene3D G3DSA:3.40.710.10 14 356 4.7E-80 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS11610 c1fe350813d931448822c13049a12a2d 763 PANTHER PTHR30480:SF3 407 716 5.1E-90 T 23-04-2016 RR42_RS11610 c1fe350813d931448822c13049a12a2d 763 Pfam PF00144 Beta-lactamase 22 348 4.5E-67 T 23-04-2016 IPR001466 Beta-lactamase-related RR42_RS03630 daed91fa9c20ea343ff576c01231d61a 67 SMART SM00357 3 67 2.9E-26 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 RR42_RS03630 daed91fa9c20ea343ff576c01231d61a 67 PANTHER PTHR11544 1 67 1.5E-28 T 23-04-2016 RR42_RS03630 daed91fa9c20ea343ff576c01231d61a 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.1E-27 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RR42_RS03630 daed91fa9c20ea343ff576c01231d61a 67 PIRSF PIRSF002599 1 67 5.3E-21 T 23-04-2016 IPR012156 Cold shock, CspA GO:0003676 RR42_RS03630 daed91fa9c20ea343ff576c01231d61a 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 23-04-2016 IPR019844 Cold-shock conserved site RR42_RS03630 daed91fa9c20ea343ff576c01231d61a 67 SUPERFAMILY SSF50249 1 65 3.21E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS03630 daed91fa9c20ea343ff576c01231d61a 67 Gene3D G3DSA:2.40.50.140 1 65 7.1E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS03630 daed91fa9c20ea343ff576c01231d61a 67 PRINTS PR00050 Cold shock protein signature 4 19 6.7E-14 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RR42_RS03630 daed91fa9c20ea343ff576c01231d61a 67 PRINTS PR00050 Cold shock protein signature 25 34 6.7E-14 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RR42_RS03630 daed91fa9c20ea343ff576c01231d61a 67 PRINTS PR00050 Cold shock protein signature 40 58 6.7E-14 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RR42_RS15220 31022c6a7858a9be4aa5fd12d9cccbd5 592 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 51 62 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS15220 31022c6a7858a9be4aa5fd12d9cccbd5 592 Gene3D G3DSA:2.40.240.10 502 588 1.8E-34 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 RR42_RS15220 31022c6a7858a9be4aa5fd12d9cccbd5 592 SUPERFAMILY SSF52374 45 376 1.5E-96 T 23-04-2016 RR42_RS15220 31022c6a7858a9be4aa5fd12d9cccbd5 592 PRINTS PR00987 Glutamyl-tRNA synthetase signature 62 73 1.7E-9 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RR42_RS15220 31022c6a7858a9be4aa5fd12d9cccbd5 592 PRINTS PR00987 Glutamyl-tRNA synthetase signature 77 90 1.7E-9 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RR42_RS15220 31022c6a7858a9be4aa5fd12d9cccbd5 592 PRINTS PR00987 Glutamyl-tRNA synthetase signature 48 60 1.7E-9 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RR42_RS15220 31022c6a7858a9be4aa5fd12d9cccbd5 592 PRINTS PR00987 Glutamyl-tRNA synthetase signature 236 246 1.7E-9 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RR42_RS15220 31022c6a7858a9be4aa5fd12d9cccbd5 592 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 45 367 1.3E-108 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 RR42_RS15220 31022c6a7858a9be4aa5fd12d9cccbd5 592 Gene3D G3DSA:2.40.240.10 379 501 7.0E-43 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 RR42_RS15220 31022c6a7858a9be4aa5fd12d9cccbd5 592 Gene3D G3DSA:3.40.50.620 45 113 4.0E-42 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS15220 31022c6a7858a9be4aa5fd12d9cccbd5 592 Gene3D G3DSA:3.40.50.620 238 293 4.0E-42 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS15220 31022c6a7858a9be4aa5fd12d9cccbd5 592 Gene3D G3DSA:3.90.800.10 127 235 3.4E-45 T 23-04-2016 RR42_RS15220 31022c6a7858a9be4aa5fd12d9cccbd5 592 PANTHER PTHR11451:SF29 298 592 1.1E-207 T 23-04-2016 RR42_RS15220 31022c6a7858a9be4aa5fd12d9cccbd5 592 PANTHER PTHR11451:SF29 45 273 1.1E-207 T 23-04-2016 RR42_RS15220 31022c6a7858a9be4aa5fd12d9cccbd5 592 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 371 569 4.7E-53 T 23-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 RR42_RS15220 31022c6a7858a9be4aa5fd12d9cccbd5 592 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 7 590 52.66 T 23-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 RR42_RS15220 31022c6a7858a9be4aa5fd12d9cccbd5 592 Gene3D G3DSA:1.10.1160.10 294 369 1.1E-34 T 23-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 RR42_RS15220 31022c6a7858a9be4aa5fd12d9cccbd5 592 PANTHER PTHR11451 298 592 1.1E-207 T 23-04-2016 RR42_RS15220 31022c6a7858a9be4aa5fd12d9cccbd5 592 PANTHER PTHR11451 45 273 1.1E-207 T 23-04-2016 RR42_RS15220 31022c6a7858a9be4aa5fd12d9cccbd5 592 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 45 592 1.5E-222 T 23-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 RR42_RS15220 31022c6a7858a9be4aa5fd12d9cccbd5 592 SUPERFAMILY SSF50715 371 589 1.26E-69 T 23-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 RR42_RS11165 c08ba79894c57511893131491b2c5cbc 148 Pfam PF01641 SelR domain 9 127 1.5E-54 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 RR42_RS11165 c08ba79894c57511893131491b2c5cbc 148 SUPERFAMILY SSF51316 5 130 1.62E-59 T 23-04-2016 IPR011057 Mss4-like RR42_RS11165 c08ba79894c57511893131491b2c5cbc 148 PANTHER PTHR10173:SF18 5 130 2.3E-64 T 23-04-2016 RR42_RS11165 c08ba79894c57511893131491b2c5cbc 148 PANTHER PTHR10173 5 130 2.3E-64 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 RR42_RS11165 c08ba79894c57511893131491b2c5cbc 148 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 6 129 38.278 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 RR42_RS11165 c08ba79894c57511893131491b2c5cbc 148 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 5 129 3.5E-57 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 RR42_RS11165 c08ba79894c57511893131491b2c5cbc 148 Gene3D G3DSA:2.170.150.20 3 131 4.3E-64 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 RR42_RS06495 8240db13188ccbd842c2a5641c7d24a7 368 Gene3D G3DSA:3.50.50.60 139 226 1.7E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS06495 8240db13188ccbd842c2a5641c7d24a7 368 Gene3D G3DSA:3.50.50.60 2 84 1.7E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS06495 8240db13188ccbd842c2a5641c7d24a7 368 Gene3D G3DSA:3.50.50.60 326 367 1.7E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS06495 8240db13188ccbd842c2a5641c7d24a7 368 SUPERFAMILY SSF51905 4 227 4.01E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS06495 8240db13188ccbd842c2a5641c7d24a7 368 SUPERFAMILY SSF51905 327 368 4.01E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS06495 8240db13188ccbd842c2a5641c7d24a7 368 Gene3D G3DSA:3.30.9.10 227 244 1.5E-7 T 23-04-2016 RR42_RS06495 8240db13188ccbd842c2a5641c7d24a7 368 Gene3D G3DSA:3.30.9.10 86 138 1.5E-7 T 23-04-2016 RR42_RS06495 8240db13188ccbd842c2a5641c7d24a7 368 Pfam PF01266 FAD dependent oxidoreductase 5 367 3.5E-61 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RR42_RS06495 8240db13188ccbd842c2a5641c7d24a7 368 PANTHER PTHR13847 1 368 3.7E-176 T 23-04-2016 RR42_RS06495 8240db13188ccbd842c2a5641c7d24a7 368 PANTHER PTHR13847:SF207 1 368 3.7E-176 T 23-04-2016 RR42_RS10350 a0da118bf0400d8e56cfa10a2b46605a 1189 SUPERFAMILY SSF52518 456 641 4.71E-8 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS10350 a0da118bf0400d8e56cfa10a2b46605a 1189 SUPERFAMILY SSF52518 28 208 2.71E-12 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS10350 a0da118bf0400d8e56cfa10a2b46605a 1189 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 756 942 1.6E-19 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RR42_RS10350 a0da118bf0400d8e56cfa10a2b46605a 1189 Gene3D G3DSA:3.40.920.10 749 943 2.2E-16 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RR42_RS10350 a0da118bf0400d8e56cfa10a2b46605a 1189 SUPERFAMILY SSF53323 749 989 1.1E-27 T 23-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 RR42_RS10350 a0da118bf0400d8e56cfa10a2b46605a 1189 PANTHER PTHR18968 449 784 1.0E-149 T 23-04-2016 RR42_RS10350 a0da118bf0400d8e56cfa10a2b46605a 1189 SUPERFAMILY SSF52922 282 412 1.1E-6 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RR42_RS10350 a0da118bf0400d8e56cfa10a2b46605a 1189 PANTHER PTHR18968:SF134 449 784 1.0E-149 T 23-04-2016 RR42_RS10350 a0da118bf0400d8e56cfa10a2b46605a 1189 Gene3D G3DSA:3.40.50.970 447 504 8.6E-4 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS10350 a0da118bf0400d8e56cfa10a2b46605a 1189 Gene3D G3DSA:3.40.50.970 513 678 1.9E-8 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS15605 bc795a786dfad9f6472293eb4b70f8b5 404 PIRSF PIRSF020818 1 404 4.4E-169 T 23-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase RR42_RS15605 bc795a786dfad9f6472293eb4b70f8b5 404 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 3 400 6.7E-151 T 23-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase RR42_RS15605 bc795a786dfad9f6472293eb4b70f8b5 404 SUPERFAMILY SSF53474 97 399 2.82E-24 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS15605 bc795a786dfad9f6472293eb4b70f8b5 404 Pfam PF06850 PHB de-polymerase C-terminus 202 401 1.2E-85 T 23-04-2016 IPR009656 PHB de-polymerase, C-terminal RR42_RS12120 1382fa983cd4e58bea9102571b545b91 1083 SUPERFAMILY SSF47226 949 1063 2.09E-10 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RR42_RS12120 1382fa983cd4e58bea9102571b545b91 1083 Pfam PF00072 Response regulator receiver domain 857 966 3.5E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS12120 1382fa983cd4e58bea9102571b545b91 1083 SMART SM00448 855 966 4.1E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS12120 1382fa983cd4e58bea9102571b545b91 1083 PANTHER PTHR24423 854 1009 2.1E-137 T 23-04-2016 RR42_RS12120 1382fa983cd4e58bea9102571b545b91 1083 PANTHER PTHR24423 362 758 2.1E-137 T 23-04-2016 RR42_RS12120 1382fa983cd4e58bea9102571b545b91 1083 Pfam PF01627 Hpt domain 999 1078 7.7E-6 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RR42_RS12120 1382fa983cd4e58bea9102571b545b91 1083 PANTHER PTHR24423:SF382 854 1009 2.1E-137 T 23-04-2016 RR42_RS12120 1382fa983cd4e58bea9102571b545b91 1083 PANTHER PTHR24423:SF382 362 758 2.1E-137 T 23-04-2016 RR42_RS12120 1382fa983cd4e58bea9102571b545b91 1083 SMART SM00388 497 562 2.2E-21 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS12120 1382fa983cd4e58bea9102571b545b91 1083 Pfam PF00512 His Kinase A (phospho-acceptor) domain 498 561 5.9E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS12120 1382fa983cd4e58bea9102571b545b91 1083 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 678 1.7E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS12120 1382fa983cd4e58bea9102571b545b91 1083 PRINTS PR00344 Bacterial sensor protein C-terminal signature 708 721 1.7E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS12120 1382fa983cd4e58bea9102571b545b91 1083 PRINTS PR00344 Bacterial sensor protein C-terminal signature 684 702 1.7E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS12120 1382fa983cd4e58bea9102571b545b91 1083 PRINTS PR00344 Bacterial sensor protein C-terminal signature 650 664 1.7E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS12120 1382fa983cd4e58bea9102571b545b91 1083 Gene3D G3DSA:3.30.565.10 563 727 2.0E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS12120 1382fa983cd4e58bea9102571b545b91 1083 Gene3D G3DSA:1.20.120.160 1001 1079 2.4E-9 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RR42_RS12120 1382fa983cd4e58bea9102571b545b91 1083 SUPERFAMILY SSF55874 552 722 1.24E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS12120 1382fa983cd4e58bea9102571b545b91 1083 SMART SM00387 609 724 2.1E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS12120 1382fa983cd4e58bea9102571b545b91 1083 Gene3D G3DSA:3.40.50.2300 854 967 8.6E-32 T 23-04-2016 RR42_RS12120 1382fa983cd4e58bea9102571b545b91 1083 Gene3D G3DSA:1.10.287.130 493 558 8.1E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS12120 1382fa983cd4e58bea9102571b545b91 1083 SUPERFAMILY SSF47384 489 563 1.33E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS12120 1382fa983cd4e58bea9102571b545b91 1083 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 609 723 3.7E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS12120 1382fa983cd4e58bea9102571b545b91 1083 SUPERFAMILY SSF52172 854 971 5.98E-33 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS17515 17487dbaeb5ba1036f9f765cd86614ef 424 PANTHER PTHR14911:SF13 271 339 2.2E-47 T 23-04-2016 RR42_RS17515 17487dbaeb5ba1036f9f765cd86614ef 424 PANTHER PTHR14911:SF13 356 404 2.2E-47 T 23-04-2016 RR42_RS17515 17487dbaeb5ba1036f9f765cd86614ef 424 PANTHER PTHR14911:SF13 5 226 2.2E-47 T 23-04-2016 RR42_RS17515 17487dbaeb5ba1036f9f765cd86614ef 424 SUPERFAMILY SSF53335 274 406 2.37E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS17515 17487dbaeb5ba1036f9f765cd86614ef 424 SUPERFAMILY SSF53335 151 231 2.37E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS17515 17487dbaeb5ba1036f9f765cd86614ef 424 PANTHER PTHR14911 271 339 2.2E-47 T 23-04-2016 RR42_RS17515 17487dbaeb5ba1036f9f765cd86614ef 424 PANTHER PTHR14911 356 404 2.2E-47 T 23-04-2016 RR42_RS17515 17487dbaeb5ba1036f9f765cd86614ef 424 PANTHER PTHR14911 5 226 2.2E-47 T 23-04-2016 RR42_RS17515 17487dbaeb5ba1036f9f765cd86614ef 424 SMART SM00981 67 165 2.0E-19 T 23-04-2016 IPR004114 THUMP domain GO:0003723 RR42_RS17515 17487dbaeb5ba1036f9f765cd86614ef 424 Gene3D G3DSA:3.40.50.150 156 228 2.1E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS17515 17487dbaeb5ba1036f9f765cd86614ef 424 Gene3D G3DSA:3.40.50.150 271 407 2.1E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS17515 17487dbaeb5ba1036f9f765cd86614ef 424 Pfam PF02926 THUMP domain 45 164 1.1E-12 T 23-04-2016 IPR004114 THUMP domain GO:0003723 RR42_RS17515 17487dbaeb5ba1036f9f765cd86614ef 424 Pfam PF01170 Putative RNA methylase family UPF0020 173 332 4.4E-33 T 23-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RR42_RS03520 d9970479e6961f53c4771a97eb0df981 497 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 17 491 1.5E-217 T 23-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath RR42_RS03520 d9970479e6961f53c4771a97eb0df981 497 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 67 491 8.0E-190 T 23-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath RR42_RS03520 d9970479e6961f53c4771a97eb0df981 497 PANTHER PTHR35565:SF3 1 496 0.0 T 23-04-2016 RR42_RS03520 d9970479e6961f53c4771a97eb0df981 497 PANTHER PTHR35565 1 496 0.0 T 23-04-2016 RR42_RS11110 347ddc940c1193421fa9d53b1fee5dfc 320 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 306 2.8E-81 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RR42_RS11110 347ddc940c1193421fa9d53b1fee5dfc 320 PANTHER PTHR10314 1 320 9.7E-205 T 23-04-2016 RR42_RS11110 347ddc940c1193421fa9d53b1fee5dfc 320 PANTHER PTHR10314:SF124 1 320 9.7E-205 T 23-04-2016 RR42_RS11110 347ddc940c1193421fa9d53b1fee5dfc 320 SUPERFAMILY SSF53686 6 314 3.93E-99 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RR42_RS11110 347ddc940c1193421fa9d53b1fee5dfc 320 Gene3D G3DSA:3.40.50.1100 73 318 2.7E-73 T 23-04-2016 RR42_RS03990 2c72558e57fcd76ffd6087db33959578 436 SUPERFAMILY SSF118215 6 405 3.53E-111 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS03990 2c72558e57fcd76ffd6087db33959578 436 PANTHER PTHR11958 1 406 4.1E-152 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS03990 2c72558e57fcd76ffd6087db33959578 436 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 8.3E-47 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS03990 2c72558e57fcd76ffd6087db33959578 436 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 8.3E-47 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS03990 2c72558e57fcd76ffd6087db33959578 436 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 8.3E-47 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS03990 2c72558e57fcd76ffd6087db33959578 436 PRINTS PR00173 Glutamate-aspartate symporter signature 331 350 8.3E-47 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS03990 2c72558e57fcd76ffd6087db33959578 436 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 8.3E-47 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS03990 2c72558e57fcd76ffd6087db33959578 436 PRINTS PR00173 Glutamate-aspartate symporter signature 296 322 8.3E-47 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS03990 2c72558e57fcd76ffd6087db33959578 436 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 8.3E-47 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS03990 2c72558e57fcd76ffd6087db33959578 436 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 8.3E-47 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS03990 2c72558e57fcd76ffd6087db33959578 436 Pfam PF00375 Sodium:dicarboxylate symporter family 8 403 1.1E-110 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS03990 2c72558e57fcd76ffd6087db33959578 436 Gene3D G3DSA:1.10.3860.10 2 406 6.0E-115 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS03990 2c72558e57fcd76ffd6087db33959578 436 PANTHER PTHR11958:SF26 1 406 4.1E-152 T 23-04-2016 IPR033380 Glutamate-aspartate symport protein GltP/GltT GO:0015293|GO:0015810|GO:0015813|GO:0016021 RR42_RS19210 31244fdf53627684e7b551d74a679e26 92 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 12 82 7.0E-36 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19210 31244fdf53627684e7b551d74a679e26 92 Pfam PF00366 Ribosomal protein S17 17 83 1.0E-32 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19210 31244fdf53627684e7b551d74a679e26 92 ProSitePatterns PS00056 Ribosomal protein S17 signature. 63 75 - T 23-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19210 31244fdf53627684e7b551d74a679e26 92 PRINTS PR00973 Ribosomal protein S17 family signature 31 54 9.7E-14 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19210 31244fdf53627684e7b551d74a679e26 92 PRINTS PR00973 Ribosomal protein S17 family signature 73 80 9.7E-14 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19210 31244fdf53627684e7b551d74a679e26 92 PRINTS PR00973 Ribosomal protein S17 family signature 63 73 9.7E-14 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19210 31244fdf53627684e7b551d74a679e26 92 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 12 82 5.8E-37 T 23-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19210 31244fdf53627684e7b551d74a679e26 92 Gene3D G3DSA:2.40.50.140 12 90 4.5E-35 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS19210 31244fdf53627684e7b551d74a679e26 92 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 10 88 25.242 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19210 31244fdf53627684e7b551d74a679e26 92 PANTHER PTHR10744 12 90 6.5E-40 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19210 31244fdf53627684e7b551d74a679e26 92 SUPERFAMILY SSF50249 12 89 7.71E-33 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS11130 02cc97dc6e1a7fc10fc47953aa877d7c 237 PANTHER PTHR24220:SF568 7 237 2.6E-89 T 23-04-2016 RR42_RS11130 02cc97dc6e1a7fc10fc47953aa877d7c 237 SMART SM00382 30 214 8.1E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS11130 02cc97dc6e1a7fc10fc47953aa877d7c 237 SUPERFAMILY SSF52540 4 229 2.56E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11130 02cc97dc6e1a7fc10fc47953aa877d7c 237 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS11130 02cc97dc6e1a7fc10fc47953aa877d7c 237 Pfam PF00005 ABC transporter 21 165 6.6E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS11130 02cc97dc6e1a7fc10fc47953aa877d7c 237 PANTHER PTHR24220 7 237 2.6E-89 T 23-04-2016 RR42_RS11130 02cc97dc6e1a7fc10fc47953aa877d7c 237 Gene3D G3DSA:3.40.50.300 2 229 2.2E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS10725 ad10b4b2b9b9f30eb36699a59edebc1d 263 PANTHER PTHR24322:SF330 16 142 2.8E-56 T 23-04-2016 RR42_RS10725 ad10b4b2b9b9f30eb36699a59edebc1d 263 PANTHER PTHR24322:SF330 158 190 2.8E-56 T 23-04-2016 RR42_RS10725 ad10b4b2b9b9f30eb36699a59edebc1d 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 261 4.8E-59 T 23-04-2016 RR42_RS10725 ad10b4b2b9b9f30eb36699a59edebc1d 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 2.6E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10725 ad10b4b2b9b9f30eb36699a59edebc1d 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.6E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10725 ad10b4b2b9b9f30eb36699a59edebc1d 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 2.6E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10725 ad10b4b2b9b9f30eb36699a59edebc1d 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.6E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10725 ad10b4b2b9b9f30eb36699a59edebc1d 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.6E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10725 ad10b4b2b9b9f30eb36699a59edebc1d 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.6E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10725 ad10b4b2b9b9f30eb36699a59edebc1d 263 Gene3D G3DSA:3.40.50.720 9 261 3.0E-83 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10725 ad10b4b2b9b9f30eb36699a59edebc1d 263 PANTHER PTHR24322 16 142 2.8E-56 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10725 ad10b4b2b9b9f30eb36699a59edebc1d 263 PANTHER PTHR24322 158 190 2.8E-56 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10725 ad10b4b2b9b9f30eb36699a59edebc1d 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RR42_RS10725 ad10b4b2b9b9f30eb36699a59edebc1d 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 4.7E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10725 ad10b4b2b9b9f30eb36699a59edebc1d 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 4.7E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10725 ad10b4b2b9b9f30eb36699a59edebc1d 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 4.7E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10725 ad10b4b2b9b9f30eb36699a59edebc1d 263 SUPERFAMILY SSF51735 11 262 2.0E-79 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10725 ad10b4b2b9b9f30eb36699a59edebc1d 263 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 12 263 9.5E-107 T 23-04-2016 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 RR42_RS09300 22ee434b220510c7bfe78595b05610b6 276 Gene3D G3DSA:3.40.830.10 2 263 3.0E-94 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RR42_RS09300 22ee434b220510c7bfe78595b05610b6 276 PANTHER PTHR30096 1 267 6.5E-102 T 23-04-2016 RR42_RS09300 22ee434b220510c7bfe78595b05610b6 276 PANTHER PTHR30096:SF0 1 267 6.5E-102 T 23-04-2016 RR42_RS09300 22ee434b220510c7bfe78595b05610b6 276 PIRSF PIRSF006157 1 265 2.7E-83 T 23-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 RR42_RS09300 22ee434b220510c7bfe78595b05610b6 276 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 37 263 3.7E-44 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RR42_RS09300 22ee434b220510c7bfe78595b05610b6 276 SUPERFAMILY SSF53213 5 263 6.8E-85 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RR42_RS20695 b8058c391b9be18dd7d673262df7f0c3 311 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 58 - T 23-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RR42_RS20695 b8058c391b9be18dd7d673262df7f0c3 311 PANTHER PTHR30055:SF73 10 173 2.4E-24 T 23-04-2016 RR42_RS20695 b8058c391b9be18dd7d673262df7f0c3 311 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 1.1E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS20695 b8058c391b9be18dd7d673262df7f0c3 311 SUPERFAMILY SSF48498 87 217 3.78E-36 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RR42_RS20695 b8058c391b9be18dd7d673262df7f0c3 311 PANTHER PTHR30055 10 173 2.4E-24 T 23-04-2016 RR42_RS20695 b8058c391b9be18dd7d673262df7f0c3 311 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 2.776533E-5 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS20695 b8058c391b9be18dd7d673262df7f0c3 311 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 2.776533E-5 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS20695 b8058c391b9be18dd7d673262df7f0c3 311 SUPERFAMILY SSF46689 7 79 5.64E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS20695 b8058c391b9be18dd7d673262df7f0c3 311 Gene3D G3DSA:1.10.357.10 5 214 9.6E-36 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS15880 35d4572b8baaa786855b64bef94538cb 237 SUPERFAMILY SSF55120 63 230 1.76E-41 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS15880 35d4572b8baaa786855b64bef94538cb 237 PANTHER PTHR21600 3 237 2.0E-50 T 23-04-2016 RR42_RS15880 35d4572b8baaa786855b64bef94538cb 237 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 68 226 5.3E-40 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RR42_RS15880 35d4572b8baaa786855b64bef94538cb 237 SUPERFAMILY SSF55174 5 90 4.88E-8 T 23-04-2016 RR42_RS15880 35d4572b8baaa786855b64bef94538cb 237 Pfam PF01479 S4 domain 4 42 6.7E-5 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RR42_RS15880 35d4572b8baaa786855b64bef94538cb 237 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 RR42_RS15880 35d4572b8baaa786855b64bef94538cb 237 Pfam PF00849 RNA pseudouridylate synthase 64 195 1.3E-13 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS15880 35d4572b8baaa786855b64bef94538cb 237 Gene3D G3DSA:3.10.290.10 3 65 1.3E-9 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RR42_RS15880 35d4572b8baaa786855b64bef94538cb 237 PANTHER PTHR21600:SF19 3 237 2.0E-50 T 23-04-2016 RR42_RS02360 3d01d2e31d2349881ea6deb4d03898b8 266 PANTHER PTHR11908:SF68 4 265 1.5E-61 T 23-04-2016 RR42_RS02360 3d01d2e31d2349881ea6deb4d03898b8 266 PANTHER PTHR11908 4 265 1.5E-61 T 23-04-2016 RR42_RS02360 3d01d2e31d2349881ea6deb4d03898b8 266 Gene3D G3DSA:3.30.390.50 171 264 2.5E-14 T 23-04-2016 RR42_RS02360 3d01d2e31d2349881ea6deb4d03898b8 266 SUPERFAMILY SSF55447 170 265 3.66E-18 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RR42_RS02360 3d01d2e31d2349881ea6deb4d03898b8 266 SUPERFAMILY SSF56176 1 167 7.09E-48 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RR42_RS02360 3d01d2e31d2349881ea6deb4d03898b8 266 Gene3D G3DSA:3.30.43.10 1 51 7.8E-17 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RR42_RS02360 3d01d2e31d2349881ea6deb4d03898b8 266 Gene3D G3DSA:3.30.465.10 56 167 2.7E-32 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RR42_RS02360 3d01d2e31d2349881ea6deb4d03898b8 266 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 167 8.1E-46 T 23-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 RR42_RS02360 3d01d2e31d2349881ea6deb4d03898b8 266 SMART SM01092 171 263 7.2E-16 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RR42_RS03605 5636c57aaa3f32eb1b47f8e09a8f85e4 327 Gene3D G3DSA:3.40.30.10 40 177 1.8E-19 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS03605 5636c57aaa3f32eb1b47f8e09a8f85e4 327 PIRSF PIRSF015753 5 323 2.3E-133 T 23-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 RR42_RS03605 5636c57aaa3f32eb1b47f8e09a8f85e4 327 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 157 4.0E-23 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RR42_RS03605 5636c57aaa3f32eb1b47f8e09a8f85e4 327 SUPERFAMILY SSF47616 175 324 9.61E-37 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS03605 5636c57aaa3f32eb1b47f8e09a8f85e4 327 PANTHER PTHR32419:SF6 1 325 1.9E-181 T 23-04-2016 RR42_RS03605 5636c57aaa3f32eb1b47f8e09a8f85e4 327 Gene3D G3DSA:1.20.1050.10 178 288 1.5E-26 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS03605 5636c57aaa3f32eb1b47f8e09a8f85e4 327 PANTHER PTHR32419 1 325 1.9E-181 T 23-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 RR42_RS03605 5636c57aaa3f32eb1b47f8e09a8f85e4 327 Pfam PF13410 Glutathione S-transferase, C-terminal domain 204 270 1.1E-14 T 23-04-2016 RR42_RS03605 5636c57aaa3f32eb1b47f8e09a8f85e4 327 SUPERFAMILY SSF52833 41 162 5.26E-15 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS16065 340d25ed39e98cf470010708d3bf51a2 193 Pfam PF00583 Acetyltransferase (GNAT) family 70 145 6.3E-13 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RR42_RS16065 340d25ed39e98cf470010708d3bf51a2 193 PANTHER PTHR23091 4 145 8.7E-16 T 23-04-2016 RR42_RS16065 340d25ed39e98cf470010708d3bf51a2 193 SUPERFAMILY SSF55729 5 155 9.94E-25 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS16065 340d25ed39e98cf470010708d3bf51a2 193 Gene3D G3DSA:3.40.630.30 3 162 3.9E-32 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS00115 c8678eade62cf8cfe65e3f89c174b2aa 361 SUPERFAMILY SSF46785 151 251 1.18E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS00115 c8678eade62cf8cfe65e3f89c174b2aa 361 Pfam PF09952 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 208 355 3.6E-7 T 23-04-2016 IPR019238 Transcriptional regulator, AbiEi_2 antitoxin, Type IV TA system RR42_RS09155 c64d618abd5cbb02c8ec99241e0c0cab 215 SUPERFAMILY SSF81342 11 205 3.14E-35 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RR42_RS09155 c64d618abd5cbb02c8ec99241e0c0cab 215 Gene3D G3DSA:1.20.950.20 11 205 1.6E-43 T 23-04-2016 RR42_RS09155 c64d618abd5cbb02c8ec99241e0c0cab 215 PANTHER PTHR30485 11 204 3.7E-59 T 23-04-2016 RR42_RS09155 c64d618abd5cbb02c8ec99241e0c0cab 215 PANTHER PTHR30485:SF1 11 204 3.7E-59 T 23-04-2016 RR42_RS09155 c64d618abd5cbb02c8ec99241e0c0cab 215 Pfam PF01292 Prokaryotic cytochrome b561 15 203 7.4E-25 T 23-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RR42_RS09155 c64d618abd5cbb02c8ec99241e0c0cab 215 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 18 41 9.4E-5 T 23-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 RR42_RS09155 c64d618abd5cbb02c8ec99241e0c0cab 215 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 169 191 9.4E-5 T 23-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 RR42_RS03845 9c655d124b93eabad7276420f3ed5a19 686 SUPERFAMILY SSF55816 406 628 4.32E-39 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 RR42_RS03845 9c655d124b93eabad7276420f3ed5a19 686 Pfam PF02872 5'-nucleotidase, C-terminal domain 408 595 3.7E-25 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 RR42_RS03845 9c655d124b93eabad7276420f3ed5a19 686 ProSitePatterns PS00786 5'-nucleotidase signature 2. 136 147 - T 23-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 RR42_RS03845 9c655d124b93eabad7276420f3ed5a19 686 PRINTS PR01607 Apyrase family signature 264 281 1.5E-25 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RR42_RS03845 9c655d124b93eabad7276420f3ed5a19 686 PRINTS PR01607 Apyrase family signature 480 503 1.5E-25 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RR42_RS03845 9c655d124b93eabad7276420f3ed5a19 686 PRINTS PR01607 Apyrase family signature 292 315 1.5E-25 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RR42_RS03845 9c655d124b93eabad7276420f3ed5a19 686 PRINTS PR01607 Apyrase family signature 48 66 1.5E-25 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RR42_RS03845 9c655d124b93eabad7276420f3ed5a19 686 PRINTS PR01607 Apyrase family signature 570 589 1.5E-25 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RR42_RS03845 9c655d124b93eabad7276420f3ed5a19 686 PRINTS PR01607 Apyrase family signature 336 356 1.5E-25 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RR42_RS03845 9c655d124b93eabad7276420f3ed5a19 686 Gene3D G3DSA:3.90.780.10 408 629 3.2E-40 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 RR42_RS03845 9c655d124b93eabad7276420f3ed5a19 686 Gene3D G3DSA:3.60.21.10 44 406 9.0E-81 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS03845 9c655d124b93eabad7276420f3ed5a19 686 SUPERFAMILY SSF56300 48 405 1.03E-74 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS03845 9c655d124b93eabad7276420f3ed5a19 686 PANTHER PTHR11575 49 640 1.6E-164 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RR42_RS03845 9c655d124b93eabad7276420f3ed5a19 686 Pfam PF00149 Calcineurin-like phosphoesterase 54 309 5.8E-5 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RR42_RS03845 9c655d124b93eabad7276420f3ed5a19 686 PANTHER PTHR11575:SF6 49 640 1.6E-164 T 23-04-2016 RR42_RS13280 a563906c3a59cfc99479aa716164e167 110 PIRSF PIRSF004555 2 110 2.6E-37 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RR42_RS13280 a563906c3a59cfc99479aa716164e167 110 Pfam PF02575 YbaB/EbfC DNA-binding family 10 100 2.3E-35 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RR42_RS13280 a563906c3a59cfc99479aa716164e167 110 PANTHER PTHR33449 1 110 8.2E-46 T 23-04-2016 RR42_RS13280 a563906c3a59cfc99479aa716164e167 110 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 99 22.813 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RR42_RS13280 a563906c3a59cfc99479aa716164e167 110 SUPERFAMILY SSF82607 10 104 9.68E-35 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RR42_RS13280 a563906c3a59cfc99479aa716164e167 110 PANTHER PTHR33449:SF1 1 110 8.2E-46 T 23-04-2016 RR42_RS13280 a563906c3a59cfc99479aa716164e167 110 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 106 2.8E-32 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RR42_RS13280 a563906c3a59cfc99479aa716164e167 110 Gene3D G3DSA:3.30.1310.10 1 110 2.3E-49 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RR42_RS17140 01e819b5205729c6028f889cd3470d0f 228 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 7 180 2.5E-48 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RR42_RS17140 01e819b5205729c6028f889cd3470d0f 228 PANTHER PTHR21600 122 179 1.6E-65 T 23-04-2016 RR42_RS17140 01e819b5205729c6028f889cd3470d0f 228 PANTHER PTHR21600 3 104 1.6E-65 T 23-04-2016 RR42_RS17140 01e819b5205729c6028f889cd3470d0f 228 Pfam PF00849 RNA pseudouridylate synthase 3 148 1.6E-11 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS17140 01e819b5205729c6028f889cd3470d0f 228 SUPERFAMILY SSF55120 3 181 1.92E-38 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS17140 01e819b5205729c6028f889cd3470d0f 228 PANTHER PTHR21600:SF23 122 179 1.6E-65 T 23-04-2016 RR42_RS17140 01e819b5205729c6028f889cd3470d0f 228 PANTHER PTHR21600:SF23 3 104 1.6E-65 T 23-04-2016 RR42_RS17140 01e819b5205729c6028f889cd3470d0f 228 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 38 52 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 RR42_RS14830 70bcf85ccd0dc905af01bfe87bc7b571 332 SUPERFAMILY SSF53850 120 292 2.17E-11 T 23-04-2016 RR42_RS14830 70bcf85ccd0dc905af01bfe87bc7b571 332 PANTHER PTHR30349 1 317 1.1E-90 T 23-04-2016 RR42_RS14830 70bcf85ccd0dc905af01bfe87bc7b571 332 PANTHER PTHR30349:SF32 1 317 1.1E-90 T 23-04-2016 RR42_RS14830 70bcf85ccd0dc905af01bfe87bc7b571 332 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 55 328 2.5E-82 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS14830 70bcf85ccd0dc905af01bfe87bc7b571 332 PIRSF PIRSF017082 1 332 5.7E-80 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS07390 a5b01451534a79bb87fe3cd11d38a847 324 PANTHER PTHR10625:SF131 7 289 3.7E-114 T 23-04-2016 RR42_RS07390 a5b01451534a79bb87fe3cd11d38a847 324 Pfam PF00850 Histone deacetylase domain 23 279 2.1E-51 T 23-04-2016 IPR023801 Histone deacetylase domain RR42_RS07390 a5b01451534a79bb87fe3cd11d38a847 324 Gene3D G3DSA:3.40.800.20 4 290 7.3E-66 T 23-04-2016 IPR023801 Histone deacetylase domain RR42_RS07390 a5b01451534a79bb87fe3cd11d38a847 324 SUPERFAMILY SSF52768 4 286 1.15E-82 T 23-04-2016 RR42_RS07390 a5b01451534a79bb87fe3cd11d38a847 324 PANTHER PTHR10625 7 289 3.7E-114 T 23-04-2016 IPR000286 Histone deacetylase superfamily RR42_RS07390 a5b01451534a79bb87fe3cd11d38a847 324 PRINTS PR01270 Histone deacetylase superfamily signature 221 231 1.5E-14 T 23-04-2016 IPR000286 Histone deacetylase superfamily RR42_RS07390 a5b01451534a79bb87fe3cd11d38a847 324 PRINTS PR01270 Histone deacetylase superfamily signature 113 136 1.5E-14 T 23-04-2016 IPR000286 Histone deacetylase superfamily RR42_RS07390 a5b01451534a79bb87fe3cd11d38a847 324 PRINTS PR01270 Histone deacetylase superfamily signature 147 162 1.5E-14 T 23-04-2016 IPR000286 Histone deacetylase superfamily RR42_RS02705 0b51b890076d768a4ea1ba61e39c3d4c 193 Pfam PF14520 Helix-hairpin-helix domain 72 129 5.5E-17 T 23-04-2016 RR42_RS02705 0b51b890076d768a4ea1ba61e39c3d4c 193 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 188 1.9E-51 T 23-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 RR42_RS02705 0b51b890076d768a4ea1ba61e39c3d4c 193 PANTHER PTHR33796 2 193 7.1E-70 T 23-04-2016 RR42_RS02705 0b51b890076d768a4ea1ba61e39c3d4c 193 SMART SM00278 73 92 9.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RR42_RS02705 0b51b890076d768a4ea1ba61e39c3d4c 193 SMART SM00278 108 127 0.0015 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RR42_RS02705 0b51b890076d768a4ea1ba61e39c3d4c 193 Pfam PF07499 RuvA, C-terminal domain 151 191 3.8E-11 T 23-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 RR42_RS02705 0b51b890076d768a4ea1ba61e39c3d4c 193 Gene3D G3DSA:2.40.50.140 1 64 9.0E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS02705 0b51b890076d768a4ea1ba61e39c3d4c 193 Pfam PF01330 RuvA N terminal domain 1 62 4.8E-21 T 23-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 RR42_RS02705 0b51b890076d768a4ea1ba61e39c3d4c 193 SUPERFAMILY SSF50249 1 63 2.23E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS02705 0b51b890076d768a4ea1ba61e39c3d4c 193 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 191 30.631 T 23-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 RR42_RS02705 0b51b890076d768a4ea1ba61e39c3d4c 193 Gene3D G3DSA:1.10.150.20 68 134 7.7E-29 T 23-04-2016 RR42_RS02705 0b51b890076d768a4ea1ba61e39c3d4c 193 Gene3D G3DSA:1.10.8.10 151 190 3.8E-7 T 23-04-2016 RR42_RS02705 0b51b890076d768a4ea1ba61e39c3d4c 193 SUPERFAMILY SSF46929 150 192 3.14E-8 T 23-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 RR42_RS02705 0b51b890076d768a4ea1ba61e39c3d4c 193 SUPERFAMILY SSF47781 66 133 1.11E-20 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RR42_RS14025 8f3ddc7f24da732f1feef6eb31d272fc 260 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 12 244 8.9E-97 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 RR42_RS14025 8f3ddc7f24da732f1feef6eb31d272fc 260 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 249 125.903 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 RR42_RS14025 8f3ddc7f24da732f1feef6eb31d272fc 260 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 12 244 2.2E-102 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 RR42_RS14025 8f3ddc7f24da732f1feef6eb31d272fc 260 PANTHER PTHR30456 8 251 3.2E-136 T 23-04-2016 RR42_RS14025 8f3ddc7f24da732f1feef6eb31d272fc 260 Gene3D G3DSA:3.20.20.70 10 247 9.5E-108 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS14025 8f3ddc7f24da732f1feef6eb31d272fc 260 SUPERFAMILY SSF63892 10 246 7.32E-97 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 RR42_RS14025 8f3ddc7f24da732f1feef6eb31d272fc 260 PANTHER PTHR30456:SF0 8 251 3.2E-136 T 23-04-2016 RR42_RS16225 5533cb0b0dc85d506157b4411806906c 522 PRINTS PR00481 Cytosol aminopeptidase signature 348 369 4.4E-55 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RR42_RS16225 5533cb0b0dc85d506157b4411806906c 522 PRINTS PR00481 Cytosol aminopeptidase signature 311 332 4.4E-55 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RR42_RS16225 5533cb0b0dc85d506157b4411806906c 522 PRINTS PR00481 Cytosol aminopeptidase signature 398 413 4.4E-55 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RR42_RS16225 5533cb0b0dc85d506157b4411806906c 522 PRINTS PR00481 Cytosol aminopeptidase signature 370 390 4.4E-55 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RR42_RS16225 5533cb0b0dc85d506157b4411806906c 522 PRINTS PR00481 Cytosol aminopeptidase signature 289 306 4.4E-55 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RR42_RS16225 5533cb0b0dc85d506157b4411806906c 522 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 374 381 - T 23-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RR42_RS16225 5533cb0b0dc85d506157b4411806906c 522 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 213 513 7.3E-122 T 23-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RR42_RS16225 5533cb0b0dc85d506157b4411806906c 522 Gene3D G3DSA:3.40.630.10 206 519 1.0E-139 T 23-04-2016 RR42_RS16225 5533cb0b0dc85d506157b4411806906c 522 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 11 522 36.995 T 23-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 RR42_RS16225 5533cb0b0dc85d506157b4411806906c 522 PANTHER PTHR11963:SF13 22 522 9.2E-194 T 23-04-2016 RR42_RS16225 5533cb0b0dc85d506157b4411806906c 522 Gene3D G3DSA:3.40.220.10 1 152 7.4E-42 T 23-04-2016 RR42_RS16225 5533cb0b0dc85d506157b4411806906c 522 SUPERFAMILY SSF52949 16 211 3.34E-29 T 23-04-2016 RR42_RS16225 5533cb0b0dc85d506157b4411806906c 522 PANTHER PTHR11963 22 522 9.2E-194 T 23-04-2016 RR42_RS16225 5533cb0b0dc85d506157b4411806906c 522 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 27 133 1.5E-20 T 23-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RR42_RS16225 5533cb0b0dc85d506157b4411806906c 522 SUPERFAMILY SSF53187 206 520 1.66E-125 T 23-04-2016 RR42_RS03910 de719f04b38e0b3c9206f42c01e7230e 157 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RR42_RS03910 de719f04b38e0b3c9206f42c01e7230e 157 Gene3D G3DSA:1.10.150.120 74 153 2.7E-32 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RR42_RS03910 de719f04b38e0b3c9206f42c01e7230e 157 PANTHER PTHR11908:SF66 4 134 5.3E-33 T 23-04-2016 RR42_RS03910 de719f04b38e0b3c9206f42c01e7230e 157 SUPERFAMILY SSF54292 4 86 1.19E-26 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS03910 de719f04b38e0b3c9206f42c01e7230e 157 Gene3D G3DSA:3.10.20.30 4 73 2.5E-28 T 23-04-2016 IPR012675 Beta-grasp domain RR42_RS03910 de719f04b38e0b3c9206f42c01e7230e 157 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 62 5.4E-9 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS03910 de719f04b38e0b3c9206f42c01e7230e 157 SUPERFAMILY SSF47741 83 153 6.93E-30 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RR42_RS03910 de719f04b38e0b3c9206f42c01e7230e 157 Pfam PF01799 [2Fe-2S] binding domain 72 144 6.8E-28 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RR42_RS03910 de719f04b38e0b3c9206f42c01e7230e 157 PANTHER PTHR11908 4 134 5.3E-33 T 23-04-2016 RR42_RS09420 6e36d8ec2c36daeb5c11c5652eeaf1fc 232 PANTHER PTHR30055 34 215 1.6E-23 T 23-04-2016 RR42_RS09420 6e36d8ec2c36daeb5c11c5652eeaf1fc 232 Pfam PF13305 WHG domain 113 197 2.5E-17 T 23-04-2016 IPR025996 WHG domain RR42_RS09420 6e36d8ec2c36daeb5c11c5652eeaf1fc 232 PANTHER PTHR30055:SF23 34 215 1.6E-23 T 23-04-2016 RR42_RS09420 6e36d8ec2c36daeb5c11c5652eeaf1fc 232 SUPERFAMILY SSF48498 110 215 3.19E-21 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RR42_RS09420 6e36d8ec2c36daeb5c11c5652eeaf1fc 232 SUPERFAMILY SSF46689 28 100 1.39E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS09420 6e36d8ec2c36daeb5c11c5652eeaf1fc 232 Gene3D G3DSA:1.10.357.10 30 226 6.0E-38 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS09420 6e36d8ec2c36daeb5c11c5652eeaf1fc 232 Pfam PF00440 Bacterial regulatory proteins, tetR family 43 84 9.3E-5 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS08715 fdf30e7c0970e153a21d0834e52e9aed 305 Pfam PF03466 LysR substrate binding domain 92 296 3.6E-45 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS08715 fdf30e7c0970e153a21d0834e52e9aed 305 PANTHER PTHR30537 1 298 3.5E-114 T 23-04-2016 RR42_RS08715 fdf30e7c0970e153a21d0834e52e9aed 305 Gene3D G3DSA:1.10.10.10 6 89 2.1E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS08715 fdf30e7c0970e153a21d0834e52e9aed 305 PANTHER PTHR30537:SF25 1 298 3.5E-114 T 23-04-2016 RR42_RS08715 fdf30e7c0970e153a21d0834e52e9aed 305 SUPERFAMILY SSF53850 92 300 1.03E-46 T 23-04-2016 RR42_RS08715 fdf30e7c0970e153a21d0834e52e9aed 305 SUPERFAMILY SSF46785 5 114 9.01E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS08715 fdf30e7c0970e153a21d0834e52e9aed 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 1.9E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS08715 fdf30e7c0970e153a21d0834e52e9aed 305 Gene3D G3DSA:3.40.190.10 96 181 8.9E-27 T 23-04-2016 RR42_RS08715 fdf30e7c0970e153a21d0834e52e9aed 305 Gene3D G3DSA:3.40.190.10 182 262 1.2E-5 T 23-04-2016 RR42_RS17270 ea4522464a3914185a13c061acaa620c 383 Pfam PF00684 DnaJ central domain 156 216 5.3E-15 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RR42_RS17270 ea4522464a3914185a13c061acaa620c 383 SUPERFAMILY SSF49493 223 265 1.57E-18 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RR42_RS17270 ea4522464a3914185a13c061acaa620c 383 SUPERFAMILY SSF49493 124 181 1.57E-18 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RR42_RS17270 ea4522464a3914185a13c061acaa620c 383 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 358 1.9E-134 T 23-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 RR42_RS17270 ea4522464a3914185a13c061acaa620c 383 Gene3D G3DSA:1.10.287.110 1 107 4.6E-37 T 23-04-2016 IPR001623 DnaJ domain RR42_RS17270 ea4522464a3914185a13c061acaa620c 383 Pfam PF00226 DnaJ domain 5 67 2.5E-28 T 23-04-2016 IPR001623 DnaJ domain RR42_RS17270 ea4522464a3914185a13c061acaa620c 383 PANTHER PTHR24078:SF190 1 356 3.3E-153 T 23-04-2016 RR42_RS17270 ea4522464a3914185a13c061acaa620c 383 SUPERFAMILY SSF57938 143 219 5.36E-22 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RR42_RS17270 ea4522464a3914185a13c061acaa620c 383 Gene3D G3DSA:2.60.260.20 219 263 1.1E-18 T 23-04-2016 RR42_RS17270 ea4522464a3914185a13c061acaa620c 383 Gene3D G3DSA:2.60.260.20 118 150 1.1E-18 T 23-04-2016 RR42_RS17270 ea4522464a3914185a13c061acaa620c 383 Gene3D G3DSA:2.10.230.10 151 218 1.6E-24 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RR42_RS17270 ea4522464a3914185a13c061acaa620c 383 SUPERFAMILY SSF49493 267 353 2.62E-24 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RR42_RS17270 ea4522464a3914185a13c061acaa620c 383 SMART SM00271 4 62 2.1E-32 T 23-04-2016 IPR001623 DnaJ domain RR42_RS17270 ea4522464a3914185a13c061acaa620c 383 PANTHER PTHR24078 1 356 3.3E-153 T 23-04-2016 RR42_RS17270 ea4522464a3914185a13c061acaa620c 383 PRINTS PR00625 DnaJ domain signature 25 40 8.4E-33 T 23-04-2016 IPR001623 DnaJ domain RR42_RS17270 ea4522464a3914185a13c061acaa620c 383 PRINTS PR00625 DnaJ domain signature 7 25 8.4E-33 T 23-04-2016 IPR001623 DnaJ domain RR42_RS17270 ea4522464a3914185a13c061acaa620c 383 PRINTS PR00625 DnaJ domain signature 62 81 8.4E-33 T 23-04-2016 IPR001623 DnaJ domain RR42_RS17270 ea4522464a3914185a13c061acaa620c 383 PRINTS PR00625 DnaJ domain signature 42 62 8.4E-33 T 23-04-2016 IPR001623 DnaJ domain RR42_RS17270 ea4522464a3914185a13c061acaa620c 383 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 381 41.191 T 23-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 RR42_RS17270 ea4522464a3914185a13c061acaa620c 383 Pfam PF01556 DnaJ C terminal domain 130 342 6.1E-42 T 23-04-2016 IPR002939 Chaperone DnaJ, C-terminal RR42_RS17270 ea4522464a3914185a13c061acaa620c 383 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 23-04-2016 IPR018253 DnaJ domain, conserved site RR42_RS17270 ea4522464a3914185a13c061acaa620c 383 Gene3D G3DSA:2.60.260.20 265 342 2.2E-24 T 23-04-2016 RR42_RS17270 ea4522464a3914185a13c061acaa620c 383 SUPERFAMILY SSF46565 1 109 6.8E-37 T 23-04-2016 IPR001623 DnaJ domain RR42_RS00600 ea4c0eae0d2ed070588959a794eccabd 323 Gene3D G3DSA:3.40.50.1820 53 318 2.0E-43 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS00600 ea4c0eae0d2ed070588959a794eccabd 323 PANTHER PTHR17630 67 276 4.0E-15 T 23-04-2016 RR42_RS00600 ea4c0eae0d2ed070588959a794eccabd 323 Pfam PF01738 Dienelactone hydrolase family 83 278 2.9E-17 T 23-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 RR42_RS00600 ea4c0eae0d2ed070588959a794eccabd 323 SUPERFAMILY SSF53474 40 282 4.63E-31 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS08330 3828268315f6734e0657dab84d48f582 170 Gene3D G3DSA:2.40.50.230 39 99 9.9E-7 T 23-04-2016 IPR006531 Gp5 N-terminal RR42_RS08330 3828268315f6734e0657dab84d48f582 170 SUPERFAMILY SSF69255 28 98 2.33E-7 T 23-04-2016 RR42_RS07775 8f39daea17f938c0e67ff81bcfa0e58e 297 PANTHER PTHR30085 4 293 1.8E-99 T 23-04-2016 RR42_RS07775 8f39daea17f938c0e67ff81bcfa0e58e 297 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 266 5.1E-48 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RR42_RS07775 8f39daea17f938c0e67ff81bcfa0e58e 297 PANTHER PTHR30085:SF2 4 293 1.8E-99 T 23-04-2016 RR42_RS07775 8f39daea17f938c0e67ff81bcfa0e58e 297 SUPERFAMILY SSF53850 1 269 8.7E-60 T 23-04-2016 RR42_RS07775 8f39daea17f938c0e67ff81bcfa0e58e 297 Gene3D G3DSA:3.40.190.10 229 269 9.6E-29 T 23-04-2016 RR42_RS07775 8f39daea17f938c0e67ff81bcfa0e58e 297 Gene3D G3DSA:3.40.190.10 34 120 9.6E-29 T 23-04-2016 RR42_RS07775 8f39daea17f938c0e67ff81bcfa0e58e 297 Gene3D G3DSA:3.40.190.10 121 228 4.4E-23 T 23-04-2016 RR42_RS07775 8f39daea17f938c0e67ff81bcfa0e58e 297 SMART SM00062 36 268 2.9E-59 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RR42_RS07795 35002027fdf75d52f830c34c41e9ca05 574 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 317 511 5.1E-60 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RR42_RS07795 35002027fdf75d52f830c34c41e9ca05 574 Gene3D G3DSA:1.10.287.950 279 484 1.3E-60 T 23-04-2016 RR42_RS07795 35002027fdf75d52f830c34c41e9ca05 574 SMART SM00283 265 512 1.0E-85 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RR42_RS07795 35002027fdf75d52f830c34c41e9ca05 574 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 178 2.2E-25 T 23-04-2016 IPR024478 4HB MCP domain RR42_RS07795 35002027fdf75d52f830c34c41e9ca05 574 Pfam PF00672 HAMP domain 193 259 9.1E-13 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS07795 35002027fdf75d52f830c34c41e9ca05 574 PANTHER PTHR32089 171 515 1.1E-144 T 23-04-2016 RR42_RS07795 35002027fdf75d52f830c34c41e9ca05 574 SUPERFAMILY SSF58104 232 513 9.29E-72 T 23-04-2016 RR42_RS07795 35002027fdf75d52f830c34c41e9ca05 574 SMART SM00304 212 264 1.1E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS07795 35002027fdf75d52f830c34c41e9ca05 574 PANTHER PTHR32089:SF63 171 515 1.1E-144 T 23-04-2016 RR42_RS07795 35002027fdf75d52f830c34c41e9ca05 574 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 1.2E-62 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RR42_RS07795 35002027fdf75d52f830c34c41e9ca05 574 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 1.2E-62 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RR42_RS07795 35002027fdf75d52f830c34c41e9ca05 574 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 1.2E-62 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RR42_RS07795 35002027fdf75d52f830c34c41e9ca05 574 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 189 209 1.2E-62 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RR42_RS07795 35002027fdf75d52f830c34c41e9ca05 574 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 1.2E-62 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RR42_RS07795 35002027fdf75d52f830c34c41e9ca05 574 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 1.2E-62 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RR42_RS10655 8b0a06d0928b3f817e441698623546c6 340 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 23 334 5.6E-136 T 23-04-2016 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 RR42_RS10655 8b0a06d0928b3f817e441698623546c6 340 SUPERFAMILY SSF52518 15 335 4.11E-93 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS10655 8b0a06d0928b3f817e441698623546c6 340 PANTHER PTHR11516 23 333 9.1E-131 T 23-04-2016 RR42_RS10655 8b0a06d0928b3f817e441698623546c6 340 Gene3D G3DSA:3.40.50.970 18 335 7.4E-125 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS10655 8b0a06d0928b3f817e441698623546c6 340 Pfam PF00676 Dehydrogenase E1 component 29 319 8.3E-81 T 23-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 RR42_RS07525 c985bf48dd2edf5cfe31e4edd32c1b62 276 PANTHER PTHR10992:SF854 6 270 3.0E-33 T 23-04-2016 RR42_RS07525 c985bf48dd2edf5cfe31e4edd32c1b62 276 SUPERFAMILY SSF53474 22 268 2.66E-39 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS07525 c985bf48dd2edf5cfe31e4edd32c1b62 276 PANTHER PTHR10992 6 270 3.0E-33 T 23-04-2016 RR42_RS07525 c985bf48dd2edf5cfe31e4edd32c1b62 276 Gene3D G3DSA:3.40.50.1820 9 268 2.9E-37 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS07525 c985bf48dd2edf5cfe31e4edd32c1b62 276 Pfam PF12697 Alpha/beta hydrolase family 37 260 7.8E-12 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS08920 103699ea8444620c29aecad5a1ad4790 507 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 492 1.6E-295 T 23-04-2016 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 RR42_RS08920 103699ea8444620c29aecad5a1ad4790 507 PANTHER PTHR11938 1 31 1.1E-129 T 23-04-2016 RR42_RS08920 103699ea8444620c29aecad5a1ad4790 507 PANTHER PTHR11938 170 336 1.1E-129 T 23-04-2016 RR42_RS08920 103699ea8444620c29aecad5a1ad4790 507 PANTHER PTHR11938 134 143 1.1E-129 T 23-04-2016 RR42_RS08920 103699ea8444620c29aecad5a1ad4790 507 Pfam PF13247 4Fe-4S dicluster domain 175 271 9.1E-38 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RR42_RS08920 103699ea8444620c29aecad5a1ad4790 507 PANTHER PTHR11938:SF8 1 31 1.1E-129 T 23-04-2016 RR42_RS08920 103699ea8444620c29aecad5a1ad4790 507 PANTHER PTHR11938:SF8 170 336 1.1E-129 T 23-04-2016 RR42_RS08920 103699ea8444620c29aecad5a1ad4790 507 PANTHER PTHR11938:SF8 134 143 1.1E-129 T 23-04-2016 RR42_RS08920 103699ea8444620c29aecad5a1ad4790 507 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 435 8.0E-29 T 23-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 RR42_RS08920 103699ea8444620c29aecad5a1ad4790 507 Gene3D G3DSA:3.30.70.20 10 26 1.0E-10 T 23-04-2016 RR42_RS08920 103699ea8444620c29aecad5a1ad4790 507 Gene3D G3DSA:3.30.70.20 159 195 1.0E-10 T 23-04-2016 RR42_RS08920 103699ea8444620c29aecad5a1ad4790 507 Gene3D G3DSA:1.10.3650.10 359 434 7.5E-28 T 23-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 RR42_RS08920 103699ea8444620c29aecad5a1ad4790 507 Gene3D G3DSA:3.30.70.20 196 235 2.8E-24 T 23-04-2016 RR42_RS08920 103699ea8444620c29aecad5a1ad4790 507 SUPERFAMILY SSF54862 1 499 1.36E-181 T 23-04-2016 RR42_RS08920 103699ea8444620c29aecad5a1ad4790 507 Gene3D G3DSA:3.30.70.20 436 465 1.3E-75 T 23-04-2016 RR42_RS08920 103699ea8444620c29aecad5a1ad4790 507 Gene3D G3DSA:3.30.70.20 236 358 1.3E-75 T 23-04-2016 RR42_RS34275 171f236eb37e4ba7a5d275999895809d 135 Pfam PF00694 Aconitase C-terminal domain 2 76 1.7E-31 T 23-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS34275 171f236eb37e4ba7a5d275999895809d 135 Gene3D G3DSA:3.20.19.10 2 135 1.9E-46 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RR42_RS34275 171f236eb37e4ba7a5d275999895809d 135 PANTHER PTHR11670 9 135 3.5E-63 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS34275 171f236eb37e4ba7a5d275999895809d 135 SUPERFAMILY SSF52016 2 135 1.41E-39 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RR42_RS34275 171f236eb37e4ba7a5d275999895809d 135 PANTHER PTHR11670:SF1 9 135 3.5E-63 T 23-04-2016 RR42_RS01930 1248ab4ca9a651d3532e994d8a531732 298 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 87 100 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS01930 1248ab4ca9a651d3532e994d8a531732 298 Pfam PF04542 Sigma-70 region 2 64 132 4.7E-19 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS01930 1248ab4ca9a651d3532e994d8a531732 298 Gene3D G3DSA:1.10.601.10 25 132 1.5E-40 T 23-04-2016 RR42_RS01930 1248ab4ca9a651d3532e994d8a531732 298 Pfam PF00140 Sigma-70 factor, region 1.2 26 55 1.4E-7 T 23-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS01930 1248ab4ca9a651d3532e994d8a531732 298 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 9 296 52.11 T 23-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 RR42_RS01930 1248ab4ca9a651d3532e994d8a531732 298 Gene3D G3DSA:1.10.10.10 232 294 2.3E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS01930 1248ab4ca9a651d3532e994d8a531732 298 Pfam PF04545 Sigma-70, region 4 236 291 2.9E-14 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS01930 1248ab4ca9a651d3532e994d8a531732 298 SUPERFAMILY SSF88659 198 295 5.23E-16 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS01930 1248ab4ca9a651d3532e994d8a531732 298 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 264 290 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS01930 1248ab4ca9a651d3532e994d8a531732 298 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 24 295 2.5E-123 T 23-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 RR42_RS01930 1248ab4ca9a651d3532e994d8a531732 298 PANTHER PTHR30376 12 294 2.1E-106 T 23-04-2016 RR42_RS01930 1248ab4ca9a651d3532e994d8a531732 298 PRINTS PR00046 Major sigma-70 factor signature 279 290 2.3E-16 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS01930 1248ab4ca9a651d3532e994d8a531732 298 PRINTS PR00046 Major sigma-70 factor signature 87 100 2.3E-16 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS01930 1248ab4ca9a651d3532e994d8a531732 298 PRINTS PR00046 Major sigma-70 factor signature 111 119 2.3E-16 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS01930 1248ab4ca9a651d3532e994d8a531732 298 PRINTS PR00046 Major sigma-70 factor signature 264 279 2.3E-16 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS01930 1248ab4ca9a651d3532e994d8a531732 298 SUPERFAMILY SSF88946 24 132 5.89E-42 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS01930 1248ab4ca9a651d3532e994d8a531732 298 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 58 293 8.5E-34 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS01170 2722e18adde8bdb43ed4fe1b63deb8b9 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 5.7E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS01170 2722e18adde8bdb43ed4fe1b63deb8b9 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 5.7E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS01170 2722e18adde8bdb43ed4fe1b63deb8b9 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 5.7E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS01170 2722e18adde8bdb43ed4fe1b63deb8b9 305 Gene3D G3DSA:1.10.10.10 5 87 3.6E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS01170 2722e18adde8bdb43ed4fe1b63deb8b9 305 Pfam PF03466 LysR substrate binding domain 90 299 2.8E-45 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS01170 2722e18adde8bdb43ed4fe1b63deb8b9 305 Gene3D G3DSA:3.40.190.10 178 264 1.2E-23 T 23-04-2016 RR42_RS01170 2722e18adde8bdb43ed4fe1b63deb8b9 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 4.7E-20 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS01170 2722e18adde8bdb43ed4fe1b63deb8b9 305 PANTHER PTHR30537 1 300 1.3E-106 T 23-04-2016 RR42_RS01170 2722e18adde8bdb43ed4fe1b63deb8b9 305 SUPERFAMILY SSF53850 91 300 6.67E-46 T 23-04-2016 RR42_RS01170 2722e18adde8bdb43ed4fe1b63deb8b9 305 SUPERFAMILY SSF46785 5 113 7.89E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS01170 2722e18adde8bdb43ed4fe1b63deb8b9 305 PANTHER PTHR30537:SF5 1 300 1.3E-106 T 23-04-2016 RR42_RS01170 2722e18adde8bdb43ed4fe1b63deb8b9 305 Gene3D G3DSA:3.40.190.10 94 177 1.3E-25 T 23-04-2016 RR42_RS17460 9326d976fd3bc38d5d860161f12cd700 204 SUPERFAMILY SSF47616 69 202 5.29E-25 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS17460 9326d976fd3bc38d5d860161f12cd700 204 Pfam PF13410 Glutathione S-transferase, C-terminal domain 122 186 5.0E-13 T 23-04-2016 RR42_RS17460 9326d976fd3bc38d5d860161f12cd700 204 Gene3D G3DSA:1.20.1050.10 89 198 4.5E-20 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS17460 9326d976fd3bc38d5d860161f12cd700 204 SUPERFAMILY SSF52833 1 100 1.89E-24 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS17460 9326d976fd3bc38d5d860161f12cd700 204 PANTHER PTHR11260:SF256 1 203 1.0E-42 T 23-04-2016 RR42_RS17460 9326d976fd3bc38d5d860161f12cd700 204 PANTHER PTHR11260 1 203 1.0E-42 T 23-04-2016 RR42_RS17460 9326d976fd3bc38d5d860161f12cd700 204 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 2.5E-18 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RR42_RS17460 9326d976fd3bc38d5d860161f12cd700 204 Gene3D G3DSA:3.40.30.10 1 88 7.9E-29 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS14655 928306a5026d16b15841b0b6e4910223 176 Pfam PF02417 Chromate transporter 10 171 2.2E-28 T 23-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 RR42_RS14655 928306a5026d16b15841b0b6e4910223 176 PANTHER PTHR33567 1 172 1.2E-24 T 23-04-2016 RR42_RS06190 50bddf5f5fa7d2f9bda5c6b84deda109 342 Gene3D G3DSA:3.55.30.10 6 189 5.2E-61 T 23-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 RR42_RS06190 50bddf5f5fa7d2f9bda5c6b84deda109 342 Pfam PF01430 Hsp33 protein 8 317 1.7E-80 T 23-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 RR42_RS06190 50bddf5f5fa7d2f9bda5c6b84deda109 342 PANTHER PTHR30111:SF1 8 191 4.4E-50 T 23-04-2016 RR42_RS06190 50bddf5f5fa7d2f9bda5c6b84deda109 342 PANTHER PTHR30111:SF1 217 332 4.4E-50 T 23-04-2016 RR42_RS06190 50bddf5f5fa7d2f9bda5c6b84deda109 342 SUPERFAMILY SSF118352 270 326 7.59E-18 T 23-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 RR42_RS06190 50bddf5f5fa7d2f9bda5c6b84deda109 342 PANTHER PTHR30111 8 191 4.4E-50 T 23-04-2016 RR42_RS06190 50bddf5f5fa7d2f9bda5c6b84deda109 342 PANTHER PTHR30111 217 332 4.4E-50 T 23-04-2016 RR42_RS06190 50bddf5f5fa7d2f9bda5c6b84deda109 342 Gene3D G3DSA:1.10.287.480 220 267 3.0E-6 T 23-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain RR42_RS06190 50bddf5f5fa7d2f9bda5c6b84deda109 342 PIRSF PIRSF005261 2 327 3.1E-68 T 23-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 RR42_RS06190 50bddf5f5fa7d2f9bda5c6b84deda109 342 Gene3D G3DSA:3.90.1280.10 270 326 2.0E-23 T 23-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 RR42_RS06190 50bddf5f5fa7d2f9bda5c6b84deda109 342 SUPERFAMILY SSF64397 221 276 4.45E-58 T 23-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 RR42_RS06190 50bddf5f5fa7d2f9bda5c6b84deda109 342 SUPERFAMILY SSF64397 8 193 4.45E-58 T 23-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 RR42_RS16500 20fccaaf86318fa172e9043f5f4b1e7c 340 PANTHER PTHR11627 4 340 1.5E-172 T 23-04-2016 RR42_RS16500 20fccaaf86318fa172e9043f5f4b1e7c 340 Pfam PF00274 Fructose-bisphosphate aldolase class-I 6 337 1.3E-134 T 23-04-2016 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS16500 20fccaaf86318fa172e9043f5f4b1e7c 340 Gene3D G3DSA:3.20.20.70 3 333 1.1E-142 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS16500 20fccaaf86318fa172e9043f5f4b1e7c 340 SUPERFAMILY SSF51569 3 338 8.58E-128 T 23-04-2016 RR42_RS16500 20fccaaf86318fa172e9043f5f4b1e7c 340 PANTHER PTHR11627:SF20 4 340 1.5E-172 T 23-04-2016 RR42_RS15810 7dd8484602588d8c84bd6e3f1f0ed3f9 333 Gene3D G3DSA:3.40.50.720 2 243 1.0E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS15810 7dd8484602588d8c84bd6e3f1f0ed3f9 333 PANTHER PTHR10366:SF360 6 263 3.2E-121 T 23-04-2016 RR42_RS15810 7dd8484602588d8c84bd6e3f1f0ed3f9 333 Pfam PF02719 Polysaccharide biosynthesis protein 7 279 1.1E-100 T 23-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain RR42_RS15810 7dd8484602588d8c84bd6e3f1f0ed3f9 333 PANTHER PTHR10366 6 263 3.2E-121 T 23-04-2016 RR42_RS15810 7dd8484602588d8c84bd6e3f1f0ed3f9 333 SUPERFAMILY SSF51735 1 260 8.25E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS15810 7dd8484602588d8c84bd6e3f1f0ed3f9 333 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 1 327 4.7E-166 T 23-04-2016 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00010+4.2.1.11|KEGG: 00520+4.2.1.115|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6143|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 RR42_RS05175 97037a4ab0414ae0d7613ab8c20a2274 343 SUPERFAMILY SSF56935 18 343 2.2E-56 T 23-04-2016 RR42_RS05175 97037a4ab0414ae0d7613ab8c20a2274 343 Pfam PF13609 Gram-negative porin 8 311 7.6E-36 T 23-04-2016 RR42_RS05175 97037a4ab0414ae0d7613ab8c20a2274 343 Gene3D G3DSA:2.40.160.10 18 343 2.0E-62 T 23-04-2016 IPR023614 Porin domain RR42_RS05175 97037a4ab0414ae0d7613ab8c20a2274 343 PRINTS PR00184 Neisseria sp. porin signature 50 75 1.84E-6 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RR42_RS05175 97037a4ab0414ae0d7613ab8c20a2274 343 PRINTS PR00184 Neisseria sp. porin signature 261 287 1.84E-6 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RR42_RS05175 97037a4ab0414ae0d7613ab8c20a2274 343 PRINTS PR00184 Neisseria sp. porin signature 145 162 1.84E-6 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RR42_RS05175 97037a4ab0414ae0d7613ab8c20a2274 343 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 173 185 6.46E-7 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RR42_RS05175 97037a4ab0414ae0d7613ab8c20a2274 343 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 88 98 6.46E-7 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RR42_RS05175 97037a4ab0414ae0d7613ab8c20a2274 343 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 287 304 6.46E-7 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RR42_RS05175 97037a4ab0414ae0d7613ab8c20a2274 343 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 48 59 6.46E-7 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RR42_RS05175 97037a4ab0414ae0d7613ab8c20a2274 343 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 146 157 6.46E-7 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RR42_RS15980 7dbda31f7bfb5035777edd7ab84d280d 1007 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 45 74 0.0014 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RR42_RS15980 7dbda31f7bfb5035777edd7ab84d280d 1007 Pfam PF01568 Molydopterin dinucleotide binding domain 873 999 1.9E-17 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RR42_RS15980 7dbda31f7bfb5035777edd7ab84d280d 1007 PANTHER PTHR11615:SF140 430 533 1.7E-284 T 23-04-2016 RR42_RS15980 7dbda31f7bfb5035777edd7ab84d280d 1007 PANTHER PTHR11615:SF140 781 1005 1.7E-284 T 23-04-2016 RR42_RS15980 7dbda31f7bfb5035777edd7ab84d280d 1007 PANTHER PTHR11615:SF140 39 411 1.7E-284 T 23-04-2016 RR42_RS15980 7dbda31f7bfb5035777edd7ab84d280d 1007 PANTHER PTHR11615:SF140 549 641 1.7E-284 T 23-04-2016 RR42_RS15980 7dbda31f7bfb5035777edd7ab84d280d 1007 Gene3D G3DSA:3.40.50.740 406 669 5.3E-76 T 23-04-2016 RR42_RS15980 7dbda31f7bfb5035777edd7ab84d280d 1007 Gene3D G3DSA:3.40.50.740 147 221 5.3E-76 T 23-04-2016 RR42_RS15980 7dbda31f7bfb5035777edd7ab84d280d 1007 SUPERFAMILY SSF53706 90 649 9.29E-200 T 23-04-2016 RR42_RS15980 7dbda31f7bfb5035777edd7ab84d280d 1007 Gene3D G3DSA:2.20.25.90 92 144 1.1E-13 T 23-04-2016 RR42_RS15980 7dbda31f7bfb5035777edd7ab84d280d 1007 Pfam PF00384 Molybdopterin oxidoreductase 147 602 2.5E-56 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RR42_RS15980 7dbda31f7bfb5035777edd7ab84d280d 1007 SUPERFAMILY SSF50692 837 1005 5.2E-38 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain RR42_RS15980 7dbda31f7bfb5035777edd7ab84d280d 1007 SMART SM00926 90 144 3.0E-10 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RR42_RS15980 7dbda31f7bfb5035777edd7ab84d280d 1007 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 92 141 5.4E-9 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RR42_RS15980 7dbda31f7bfb5035777edd7ab84d280d 1007 Gene3D G3DSA:2.40.40.20 690 723 7.6E-51 T 23-04-2016 RR42_RS15980 7dbda31f7bfb5035777edd7ab84d280d 1007 Gene3D G3DSA:2.40.40.20 867 1005 7.6E-51 T 23-04-2016 RR42_RS15980 7dbda31f7bfb5035777edd7ab84d280d 1007 Gene3D G3DSA:2.40.40.20 819 830 7.6E-51 T 23-04-2016 RR42_RS15980 7dbda31f7bfb5035777edd7ab84d280d 1007 Gene3D G3DSA:3.40.228.10 222 405 3.5E-63 T 23-04-2016 RR42_RS15980 7dbda31f7bfb5035777edd7ab84d280d 1007 PANTHER PTHR11615 430 533 1.7E-284 T 23-04-2016 RR42_RS15980 7dbda31f7bfb5035777edd7ab84d280d 1007 PANTHER PTHR11615 781 1005 1.7E-284 T 23-04-2016 RR42_RS15980 7dbda31f7bfb5035777edd7ab84d280d 1007 PANTHER PTHR11615 39 411 1.7E-284 T 23-04-2016 RR42_RS15980 7dbda31f7bfb5035777edd7ab84d280d 1007 PANTHER PTHR11615 549 641 1.7E-284 T 23-04-2016 RR42_RS15980 7dbda31f7bfb5035777edd7ab84d280d 1007 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 95 112 - T 23-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 RR42_RS02820 671625052257434fa2fedc2cf970dc9d 710 SMART SM00836 606 708 0.0015 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RR42_RS02820 671625052257434fa2fedc2cf970dc9d 710 PANTHER PTHR30075 7 710 7.8E-254 T 23-04-2016 RR42_RS02820 671625052257434fa2fedc2cf970dc9d 710 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 415 434 1.6E-31 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RR42_RS02820 671625052257434fa2fedc2cf970dc9d 710 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 13 26 1.6E-31 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RR42_RS02820 671625052257434fa2fedc2cf970dc9d 710 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 58 70 1.6E-31 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RR42_RS02820 671625052257434fa2fedc2cf970dc9d 710 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 262 277 1.6E-31 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RR42_RS02820 671625052257434fa2fedc2cf970dc9d 710 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 334 350 1.6E-31 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RR42_RS02820 671625052257434fa2fedc2cf970dc9d 710 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 9 708 4.4E-195 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RR42_RS02820 671625052257434fa2fedc2cf970dc9d 710 SUPERFAMILY SSF109604 357 511 1.99E-13 T 23-04-2016 RR42_RS02820 671625052257434fa2fedc2cf970dc9d 710 Gene3D G3DSA:1.10.730.10 603 695 2.0E-6 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS02820 671625052257434fa2fedc2cf970dc9d 710 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 9 708 24.192 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RR42_RS02820 671625052257434fa2fedc2cf970dc9d 710 Pfam PF05746 DALR anticodon binding domain 603 699 3.1E-9 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RR42_RS02820 671625052257434fa2fedc2cf970dc9d 710 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 12 571 3.1E-193 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RR42_RS11425 572c1acbb27ce93ae4ca9f0d2e64ee48 145 PANTHER PTHR23508 9 142 1.7E-56 T 23-04-2016 RR42_RS11425 572c1acbb27ce93ae4ca9f0d2e64ee48 145 Pfam PF07690 Major Facilitator Superfamily 8 140 5.7E-10 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS11425 572c1acbb27ce93ae4ca9f0d2e64ee48 145 PANTHER PTHR23508:SF18 9 142 1.7E-56 T 23-04-2016 RR42_RS11425 572c1acbb27ce93ae4ca9f0d2e64ee48 145 Gene3D G3DSA:1.20.1250.20 9 144 1.6E-17 T 23-04-2016 RR42_RS11425 572c1acbb27ce93ae4ca9f0d2e64ee48 145 SUPERFAMILY SSF103473 8 143 7.46E-22 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS05625 6ca3a36ff8d064f6abedef3a113d0605 495 PANTHER PTHR23023:SF132 7 481 3.5E-198 T 23-04-2016 RR42_RS05625 6ca3a36ff8d064f6abedef3a113d0605 495 SUPERFAMILY SSF51905 257 481 2.04E-28 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS05625 6ca3a36ff8d064f6abedef3a113d0605 495 PANTHER PTHR23023 7 481 3.5E-198 T 23-04-2016 RR42_RS05625 6ca3a36ff8d064f6abedef3a113d0605 495 Pfam PF00743 Flavin-binding monooxygenase-like 10 344 5.2E-18 T 23-04-2016 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 RR42_RS05625 6ca3a36ff8d064f6abedef3a113d0605 495 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 11 33 4.6E-5 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RR42_RS05625 6ca3a36ff8d064f6abedef3a113d0605 495 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 173 197 4.6E-5 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RR42_RS05625 6ca3a36ff8d064f6abedef3a113d0605 495 Gene3D G3DSA:3.50.50.60 300 486 2.0E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS05625 6ca3a36ff8d064f6abedef3a113d0605 495 Gene3D G3DSA:3.50.50.60 12 239 1.8E-61 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS05625 6ca3a36ff8d064f6abedef3a113d0605 495 SUPERFAMILY SSF51905 11 259 1.01E-56 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS08405 5fc36b3c0049818d5477a33bbc0b4bb4 181 Gene3D G3DSA:3.30.20.10 86 122 4.6E-10 T 23-04-2016 RR42_RS08405 5fc36b3c0049818d5477a33bbc0b4bb4 181 PANTHER PTHR34408 14 180 5.1E-34 T 23-04-2016 RR42_RS08405 5fc36b3c0049818d5477a33bbc0b4bb4 181 SUPERFAMILY SSF53955 4 180 2.0E-45 T 23-04-2016 IPR023346 Lysozyme-like domain RR42_RS08405 5fc36b3c0049818d5477a33bbc0b4bb4 181 Pfam PF00182 Chitinase class I 44 143 4.0E-7 T 23-04-2016 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 RR42_RS08405 5fc36b3c0049818d5477a33bbc0b4bb4 181 Gene3D G3DSA:1.10.530.10 123 173 6.7E-9 T 23-04-2016 RR42_RS08405 5fc36b3c0049818d5477a33bbc0b4bb4 181 Gene3D G3DSA:1.10.530.10 38 57 6.7E-9 T 23-04-2016 RR42_RS03855 83883a940ab38a37abde065006a764c7 327 PIRSF PIRSF017082 1 327 1.5E-86 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS03855 83883a940ab38a37abde065006a764c7 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 322 7.0E-92 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS03855 83883a940ab38a37abde065006a764c7 327 PANTHER PTHR30349:SF16 9 327 1.0E-100 T 23-04-2016 RR42_RS03855 83883a940ab38a37abde065006a764c7 327 SUPERFAMILY SSF53850 116 294 3.26E-16 T 23-04-2016 RR42_RS03855 83883a940ab38a37abde065006a764c7 327 Gene3D G3DSA:3.40.190.10 130 230 8.6E-5 T 23-04-2016 RR42_RS03855 83883a940ab38a37abde065006a764c7 327 PANTHER PTHR30349 9 327 1.0E-100 T 23-04-2016 RR42_RS01615 87597b8810d072118dd7c851c4f9474d 514 SMART SM00086 80 121 0.0086 T 23-04-2016 IPR001610 PAC motif RR42_RS01615 87597b8810d072118dd7c851c4f9474d 514 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 17 114 1.6E-13 T 23-04-2016 IPR000014 PAS domain RR42_RS01615 87597b8810d072118dd7c851c4f9474d 514 PANTHER PTHR32089 196 514 1.6E-125 T 23-04-2016 RR42_RS01615 87597b8810d072118dd7c851c4f9474d 514 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 513 3.7E-60 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RR42_RS01615 87597b8810d072118dd7c851c4f9474d 514 Pfam PF08447 PAS fold 31 114 8.4E-16 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 RR42_RS01615 87597b8810d072118dd7c851c4f9474d 514 Pfam PF00672 HAMP domain 196 254 5.7E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS01615 87597b8810d072118dd7c851c4f9474d 514 SMART SM00283 267 514 5.7E-90 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RR42_RS01615 87597b8810d072118dd7c851c4f9474d 514 SUPERFAMILY SSF55785 21 114 5.41E-26 T 23-04-2016 IPR000014 PAS domain RR42_RS01615 87597b8810d072118dd7c851c4f9474d 514 Gene3D G3DSA:1.10.287.950 282 486 6.5E-58 T 23-04-2016 RR42_RS01615 87597b8810d072118dd7c851c4f9474d 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 2.2E-50 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RR42_RS01615 87597b8810d072118dd7c851c4f9474d 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 2.2E-50 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RR42_RS01615 87597b8810d072118dd7c851c4f9474d 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 2.2E-50 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RR42_RS01615 87597b8810d072118dd7c851c4f9474d 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 2.2E-50 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RR42_RS01615 87597b8810d072118dd7c851c4f9474d 514 SUPERFAMILY SSF58104 242 514 3.14E-66 T 23-04-2016 RR42_RS01615 87597b8810d072118dd7c851c4f9474d 514 Gene3D G3DSA:3.30.450.20 20 114 3.1E-24 T 23-04-2016 RR42_RS01615 87597b8810d072118dd7c851c4f9474d 514 PANTHER PTHR32089:SF63 196 514 1.6E-125 T 23-04-2016 RR42_RS06545 30b4e93417313a3491fe0b380c985594 132 PANTHER PTHR31793 3 132 1.9E-31 T 23-04-2016 RR42_RS06545 30b4e93417313a3491fe0b380c985594 132 Gene3D G3DSA:3.10.129.10 4 132 8.0E-42 T 23-04-2016 IPR029069 HotDog domain RR42_RS06545 30b4e93417313a3491fe0b380c985594 132 SUPERFAMILY SSF54637 2 132 1.6E-36 T 23-04-2016 IPR029069 HotDog domain RR42_RS06545 30b4e93417313a3491fe0b380c985594 132 Pfam PF13279 Thioesterase-like superfamily 12 129 2.6E-16 T 23-04-2016 RR42_RS12790 369b7fbb9fa162ca3671485852304e42 186 SUPERFAMILY SSF52218 7 174 3.67E-48 T 23-04-2016 IPR029039 Flavoprotein-like domain RR42_RS12790 369b7fbb9fa162ca3671485852304e42 186 Gene3D G3DSA:3.40.50.360 2 182 2.3E-51 T 23-04-2016 IPR029039 Flavoprotein-like domain RR42_RS12790 369b7fbb9fa162ca3671485852304e42 186 PANTHER PTHR30543 1 182 9.0E-54 T 23-04-2016 RR42_RS12790 369b7fbb9fa162ca3671485852304e42 186 PANTHER PTHR30543:SF6 1 182 9.0E-54 T 23-04-2016 RR42_RS12790 369b7fbb9fa162ca3671485852304e42 186 Pfam PF03358 NADPH-dependent FMN reductase 7 148 8.0E-37 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 RR42_RS01015 0cae6a2ec4a9484767a0be289d2421a7 719 Pfam PF00593 TonB dependent receptor 457 717 1.6E-24 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RR42_RS01015 0cae6a2ec4a9484767a0be289d2421a7 719 Gene3D G3DSA:2.40.170.20 178 719 3.8E-65 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RR42_RS01015 0cae6a2ec4a9484767a0be289d2421a7 719 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 175 2.8E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RR42_RS01015 0cae6a2ec4a9484767a0be289d2421a7 719 PANTHER PTHR30069:SF13 60 502 6.3E-155 T 23-04-2016 RR42_RS01015 0cae6a2ec4a9484767a0be289d2421a7 719 Gene3D G3DSA:2.170.130.10 48 177 6.4E-31 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RR42_RS01015 0cae6a2ec4a9484767a0be289d2421a7 719 PANTHER PTHR30069 60 502 6.3E-155 T 23-04-2016 RR42_RS01015 0cae6a2ec4a9484767a0be289d2421a7 719 SUPERFAMILY SSF56935 58 719 1.13E-93 T 23-04-2016 RR42_RS12305 06aad3eeb8778ace7a8ec328cac7547a 99 SUPERFAMILY SSF54637 4 59 1.34E-11 T 23-04-2016 IPR029069 HotDog domain RR42_RS12305 06aad3eeb8778ace7a8ec328cac7547a 99 Gene3D G3DSA:3.10.129.10 3 52 9.1E-13 T 23-04-2016 IPR029069 HotDog domain RR42_RS05675 5930f02a9ef0654fdcfe6b0e83346148 572 SUPERFAMILY SSF51338 427 482 2.01E-6 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS05675 5930f02a9ef0654fdcfe6b0e83346148 572 ProSitePatterns PS00145 Urease active site. 318 334 - T 23-04-2016 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RR42_RS05675 5930f02a9ef0654fdcfe6b0e83346148 572 Gene3D G3DSA:3.20.20.140 138 434 1.9E-211 T 23-04-2016 RR42_RS05675 5930f02a9ef0654fdcfe6b0e83346148 572 Gene3D G3DSA:3.20.20.140 493 570 1.9E-211 T 23-04-2016 RR42_RS05675 5930f02a9ef0654fdcfe6b0e83346148 572 Hamap MF_01953 Urease subunit alpha [ureC]. 3 572 57.538 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RR42_RS05675 5930f02a9ef0654fdcfe6b0e83346148 572 SUPERFAMILY SSF51556 485 572 1.61E-198 T 23-04-2016 IPR032466 Metal-dependent hydrolase RR42_RS05675 5930f02a9ef0654fdcfe6b0e83346148 572 SUPERFAMILY SSF51556 131 436 1.61E-198 T 23-04-2016 IPR032466 Metal-dependent hydrolase RR42_RS05675 5930f02a9ef0654fdcfe6b0e83346148 572 SUPERFAMILY SSF51338 3 178 1.05E-64 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS05675 5930f02a9ef0654fdcfe6b0e83346148 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 432 445 1.2E-34 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RR42_RS05675 5930f02a9ef0654fdcfe6b0e83346148 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 335 351 1.2E-34 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RR42_RS05675 5930f02a9ef0654fdcfe6b0e83346148 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 296 313 1.2E-34 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RR42_RS05675 5930f02a9ef0654fdcfe6b0e83346148 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 406 421 1.2E-34 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RR42_RS05675 5930f02a9ef0654fdcfe6b0e83346148 572 Pfam PF00449 Urease alpha-subunit, N-terminal domain 4 120 3.0E-57 T 23-04-2016 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RR42_RS05675 5930f02a9ef0654fdcfe6b0e83346148 572 Pfam PF01979 Amidohydrolase family 126 459 6.5E-80 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RR42_RS05675 5930f02a9ef0654fdcfe6b0e83346148 572 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 572 2.4E-295 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RR42_RS05675 5930f02a9ef0654fdcfe6b0e83346148 572 PANTHER PTHR22642:SF7 321 506 5.0E-261 T 23-04-2016 RR42_RS05675 5930f02a9ef0654fdcfe6b0e83346148 572 PANTHER PTHR22642:SF7 20 297 5.0E-261 T 23-04-2016 RR42_RS05675 5930f02a9ef0654fdcfe6b0e83346148 572 Gene3D G3DSA:2.30.40.10 68 137 1.1E-14 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS05675 5930f02a9ef0654fdcfe6b0e83346148 572 PANTHER PTHR22642 321 506 5.0E-261 T 23-04-2016 RR42_RS05675 5930f02a9ef0654fdcfe6b0e83346148 572 PANTHER PTHR22642 20 297 5.0E-261 T 23-04-2016 RR42_RS05675 5930f02a9ef0654fdcfe6b0e83346148 572 ProSitePatterns PS01120 Urease nickel ligands signature. 128 141 - T 23-04-2016 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RR42_RS00560 56574d892bdb8c8a9ad7a97a12097f98 380 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 18 375 2.3E-127 T 23-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 RR42_RS00560 56574d892bdb8c8a9ad7a97a12097f98 380 Pfam PF01098 Cell cycle protein 23 376 5.2E-101 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RR42_RS00560 56574d892bdb8c8a9ad7a97a12097f98 380 PANTHER PTHR30474 1 379 5.2E-138 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RR42_RS00560 56574d892bdb8c8a9ad7a97a12097f98 380 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 333 357 - T 23-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 RR42_RS00560 56574d892bdb8c8a9ad7a97a12097f98 380 PANTHER PTHR30474:SF1 1 379 5.2E-138 T 23-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 RR42_RS11865 ecdd9b1725efff16952afa9b34eacdfc 236 Hamap MF_01220_B Uridylate kinase [pyrH]. 2 235 44.592 T 23-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RR42_RS11865 ecdd9b1725efff16952afa9b34eacdfc 236 SUPERFAMILY SSF53633 2 235 6.15E-72 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RR42_RS11865 ecdd9b1725efff16952afa9b34eacdfc 236 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 4 235 1.7E-101 T 23-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RR42_RS11865 ecdd9b1725efff16952afa9b34eacdfc 236 Gene3D G3DSA:3.40.1160.10 2 235 3.8E-85 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RR42_RS11865 ecdd9b1725efff16952afa9b34eacdfc 236 PANTHER PTHR21499 2 234 6.3E-113 T 23-04-2016 RR42_RS11865 ecdd9b1725efff16952afa9b34eacdfc 236 PIRSF PIRSF005650 1 236 4.1E-93 T 23-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RR42_RS11865 ecdd9b1725efff16952afa9b34eacdfc 236 PANTHER PTHR21499:SF23 2 234 6.3E-113 T 23-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RR42_RS11865 ecdd9b1725efff16952afa9b34eacdfc 236 Pfam PF00696 Amino acid kinase family 5 214 6.7E-30 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RR42_RS18140 816534893e6ecf67132718db8ad5d8e1 172 SUPERFAMILY SSF46785 29 167 9.82E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS18140 816534893e6ecf67132718db8ad5d8e1 172 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 131 1.0E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS18140 816534893e6ecf67132718db8ad5d8e1 172 PRINTS PR00598 Bacterial regulatory protein MarR family signature 96 111 1.0E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS18140 816534893e6ecf67132718db8ad5d8e1 172 PRINTS PR00598 Bacterial regulatory protein MarR family signature 79 95 1.0E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS18140 816534893e6ecf67132718db8ad5d8e1 172 PRINTS PR00598 Bacterial regulatory protein MarR family signature 145 165 1.0E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS18140 816534893e6ecf67132718db8ad5d8e1 172 PANTHER PTHR33164:SF3 4 166 2.2E-48 T 23-04-2016 RR42_RS18140 816534893e6ecf67132718db8ad5d8e1 172 Pfam PF01047 MarR family 62 119 4.7E-13 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS18140 816534893e6ecf67132718db8ad5d8e1 172 PANTHER PTHR33164 4 166 2.2E-48 T 23-04-2016 RR42_RS18140 816534893e6ecf67132718db8ad5d8e1 172 SMART SM00347 54 155 4.3E-21 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS18140 816534893e6ecf67132718db8ad5d8e1 172 Gene3D G3DSA:1.10.10.10 26 168 1.9E-38 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS17320 eb2e03549faa7ddc23be6e2881300b1e 128 PANTHER PTHR33931 1 111 1.6E-27 T 23-04-2016 RR42_RS17320 eb2e03549faa7ddc23be6e2881300b1e 128 PANTHER PTHR33931:SF2 1 111 1.6E-27 T 23-04-2016 RR42_RS17320 eb2e03549faa7ddc23be6e2881300b1e 128 Pfam PF03788 LrgA family 12 104 1.4E-28 T 23-04-2016 IPR005538 LrgA/CidA family GO:0016021 RR42_RS19795 878ce271d8369dc4102b9be6f1352e24 229 SMART SM00895 82 205 6.8E-15 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS19795 878ce271d8369dc4102b9be6f1352e24 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 1.6E-15 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS19795 878ce271d8369dc4102b9be6f1352e24 229 SUPERFAMILY SSF46785 1 76 2.88E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19795 878ce271d8369dc4102b9be6f1352e24 229 Gene3D G3DSA:1.10.10.10 5 73 1.5E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19795 878ce271d8369dc4102b9be6f1352e24 229 Pfam PF07729 FCD domain 82 204 1.9E-21 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS19795 878ce271d8369dc4102b9be6f1352e24 229 Gene3D G3DSA:1.20.120.530 75 210 2.8E-27 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS19795 878ce271d8369dc4102b9be6f1352e24 229 SUPERFAMILY SSF48008 78 210 5.75E-24 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS19795 878ce271d8369dc4102b9be6f1352e24 229 PANTHER PTHR11751 12 98 2.4E-17 T 23-04-2016 RR42_RS19795 878ce271d8369dc4102b9be6f1352e24 229 SMART SM00345 14 72 1.1E-14 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS11420 d04499a7f19e6dfdb40d533e06aef0fc 336 Pfam PF01734 Patatin-like phospholipase 12 186 1.4E-19 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RR42_RS11420 d04499a7f19e6dfdb40d533e06aef0fc 336 Gene3D G3DSA:3.40.1090.10 5 293 4.9E-61 T 23-04-2016 RR42_RS11420 d04499a7f19e6dfdb40d533e06aef0fc 336 SUPERFAMILY SSF52151 9 281 2.22E-45 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RR42_RS11420 d04499a7f19e6dfdb40d533e06aef0fc 336 PANTHER PTHR24138 11 199 2.6E-25 T 23-04-2016 RR42_RS07920 5c98cc7ae8737fcf175b8d73a28e3f28 136 SUPERFAMILY SSF50891 3 97 2.73E-6 T 23-04-2016 IPR029000 Cyclophilin-like domain RR42_RS07920 5c98cc7ae8737fcf175b8d73a28e3f28 136 Pfam PF12903 Protein of unknown function (DUF3830) 5 134 3.4E-30 T 23-04-2016 IPR024532 Protein of unknown function DUF3830 RR42_RS21510 2c7e795889510a26ba0ecde39e74c417 212 Pfam PF06723 MreB/Mbl protein 1 212 2.8E-94 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RR42_RS21510 2c7e795889510a26ba0ecde39e74c417 212 SUPERFAMILY SSF53067 3 83 2.59E-18 T 23-04-2016 RR42_RS21510 2c7e795889510a26ba0ecde39e74c417 212 Gene3D G3DSA:3.30.420.40 95 121 9.3E-16 T 23-04-2016 RR42_RS21510 2c7e795889510a26ba0ecde39e74c417 212 Gene3D G3DSA:3.30.420.40 198 212 9.3E-16 T 23-04-2016 RR42_RS21510 2c7e795889510a26ba0ecde39e74c417 212 Gene3D G3DSA:3.30.420.40 3 94 9.4E-25 T 23-04-2016 RR42_RS21510 2c7e795889510a26ba0ecde39e74c417 212 PANTHER PTHR19375 1 212 1.0E-113 T 23-04-2016 RR42_RS21510 2c7e795889510a26ba0ecde39e74c417 212 SUPERFAMILY SSF53067 84 212 1.71E-32 T 23-04-2016 RR42_RS21510 2c7e795889510a26ba0ecde39e74c417 212 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 67 86 5.8E-36 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RR42_RS21510 2c7e795889510a26ba0ecde39e74c417 212 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 3 26 5.8E-36 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RR42_RS21510 2c7e795889510a26ba0ecde39e74c417 212 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 122 142 5.8E-36 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RR42_RS21510 2c7e795889510a26ba0ecde39e74c417 212 PANTHER PTHR19375:SF117 1 212 1.0E-113 T 23-04-2016 RR42_RS21510 2c7e795889510a26ba0ecde39e74c417 212 Gene3D G3DSA:3.90.640.10 122 194 3.6E-30 T 23-04-2016 RR42_RS11070 c62a8fbab14e089fd2989f44b1a17a2a 260 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 187 0.0011 T 23-04-2016 RR42_RS11070 c62a8fbab14e089fd2989f44b1a17a2a 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 258 4.7E-53 T 23-04-2016 RR42_RS11070 c62a8fbab14e089fd2989f44b1a17a2a 260 Gene3D G3DSA:3.40.50.720 4 258 7.8E-81 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS11070 c62a8fbab14e089fd2989f44b1a17a2a 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 2.1E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11070 c62a8fbab14e089fd2989f44b1a17a2a 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 2.1E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11070 c62a8fbab14e089fd2989f44b1a17a2a 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 2.1E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11070 c62a8fbab14e089fd2989f44b1a17a2a 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 1.0E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11070 c62a8fbab14e089fd2989f44b1a17a2a 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.0E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11070 c62a8fbab14e089fd2989f44b1a17a2a 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 1.0E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11070 c62a8fbab14e089fd2989f44b1a17a2a 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.0E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11070 c62a8fbab14e089fd2989f44b1a17a2a 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 1.0E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11070 c62a8fbab14e089fd2989f44b1a17a2a 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 1.0E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11070 c62a8fbab14e089fd2989f44b1a17a2a 260 SUPERFAMILY SSF51735 7 259 2.0E-75 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS11070 c62a8fbab14e089fd2989f44b1a17a2a 260 PANTHER PTHR24322 17 146 1.5E-57 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11070 c62a8fbab14e089fd2989f44b1a17a2a 260 PANTHER PTHR24322 166 198 1.5E-57 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11070 c62a8fbab14e089fd2989f44b1a17a2a 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RR42_RS11530 8c60b41a959cee48d24bfa4df1193caa 207 Gene3D G3DSA:1.10.10.10 122 206 7.3E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS11530 8c60b41a959cee48d24bfa4df1193caa 207 SUPERFAMILY SSF52172 4 132 3.84E-30 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS11530 8c60b41a959cee48d24bfa4df1193caa 207 PANTHER PTHR26402 4 205 3.9E-58 T 23-04-2016 RR42_RS11530 8c60b41a959cee48d24bfa4df1193caa 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 1.1E-7 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS11530 8c60b41a959cee48d24bfa4df1193caa 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 1.1E-7 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS11530 8c60b41a959cee48d24bfa4df1193caa 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 1.1E-7 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS11530 8c60b41a959cee48d24bfa4df1193caa 207 SMART SM00448 4 117 4.2E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS11530 8c60b41a959cee48d24bfa4df1193caa 207 Pfam PF00072 Response regulator receiver domain 6 118 2.4E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS11530 8c60b41a959cee48d24bfa4df1193caa 207 SUPERFAMILY SSF46894 139 206 1.9E-16 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS11530 8c60b41a959cee48d24bfa4df1193caa 207 PANTHER PTHR26402:SF210 4 205 3.9E-58 T 23-04-2016 RR42_RS11530 8c60b41a959cee48d24bfa4df1193caa 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 201 8.6E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS11530 8c60b41a959cee48d24bfa4df1193caa 207 SMART SM00421 144 201 1.4E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS11530 8c60b41a959cee48d24bfa4df1193caa 207 Gene3D G3DSA:3.40.50.2300 1 121 9.5E-32 T 23-04-2016 RR42_RS15545 58dd2b223bb90dd9a9e1febc0a013456 149 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 31 124 6.9E-8 T 23-04-2016 IPR031982 Type IV minor pilin ComP RR42_RS15545 58dd2b223bb90dd9a9e1febc0a013456 149 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 4.6E-6 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS15545 58dd2b223bb90dd9a9e1febc0a013456 149 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 5 29 1.9E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS15545 58dd2b223bb90dd9a9e1febc0a013456 149 Gene3D G3DSA:3.30.700.10 10 76 1.5E-7 T 23-04-2016 RR42_RS15545 58dd2b223bb90dd9a9e1febc0a013456 149 SUPERFAMILY SSF54523 10 131 1.26E-15 T 23-04-2016 RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 SMART SM00958 228 361 7.9E-77 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 Gene3D G3DSA:3.40.50.300 422 629 2.6E-91 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 827 0.0 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 PRINTS PR00906 SecA protein signature 63 87 6.2E-70 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 PRINTS PR00906 SecA protein signature 170 190 6.2E-70 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 PRINTS PR00906 SecA protein signature 379 396 6.2E-70 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 PRINTS PR00906 SecA protein signature 101 115 6.2E-70 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 PRINTS PR00906 SecA protein signature 342 364 6.2E-70 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 PRINTS PR00906 SecA protein signature 416 429 6.2E-70 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 PRINTS PR00906 SecA protein signature 117 127 6.2E-70 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 SUPERFAMILY SSF52540 421 628 1.61E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 Pfam PF07516 SecA Wing and Scaffold domain 627 840 1.4E-65 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 SMART SM00957 6 405 0.0 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 Pfam PF02810 SEC-C motif 907 925 2.2E-10 T 23-04-2016 IPR004027 SEC-C motif RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 ProSitePatterns PS01312 SecA family signature. 503 518 - T 23-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 Gene3D G3DSA:3.90.1440.10 230 371 5.4E-44 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 Pfam PF01043 SecA preprotein cross-linking domain 233 361 1.9E-36 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 SUPERFAMILY SSF52540 371 418 3.93E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 SUPERFAMILY SSF81767 230 371 1.19E-42 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 PANTHER PTHR30612 5 523 0.0 T 23-04-2016 RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 PANTHER PTHR30612 560 927 0.0 T 23-04-2016 RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 SUPERFAMILY SSF52540 5 228 3.93E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 SUPERFAMILY SSF81886 903 915 6.41E-80 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 SUPERFAMILY SSF81886 632 850 6.41E-80 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 842 19.881 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 Pfam PF07517 SecA DEAD-like domain 6 405 5.1E-130 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 Gene3D G3DSA:1.10.3060.10 658 841 3.7E-57 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 Gene3D G3DSA:3.40.50.300 372 419 4.6E-126 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18025 ceaa94c65942788fac5962d9cbab03c3 927 Gene3D G3DSA:3.40.50.300 3 228 4.6E-126 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS00620 dcb5d2fa954c6657148a07b81e57ef7d 319 Pfam PF03466 LysR substrate binding domain 110 306 3.7E-35 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS00620 dcb5d2fa954c6657148a07b81e57ef7d 319 Gene3D G3DSA:1.10.10.10 22 104 7.0E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS00620 dcb5d2fa954c6657148a07b81e57ef7d 319 SUPERFAMILY SSF46785 22 130 4.54E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS00620 dcb5d2fa954c6657148a07b81e57ef7d 319 Gene3D G3DSA:3.40.190.10 112 195 4.2E-31 T 23-04-2016 RR42_RS00620 dcb5d2fa954c6657148a07b81e57ef7d 319 PANTHER PTHR30537 17 311 1.3E-105 T 23-04-2016 RR42_RS00620 dcb5d2fa954c6657148a07b81e57ef7d 319 PANTHER PTHR30537:SF26 17 311 1.3E-105 T 23-04-2016 RR42_RS00620 dcb5d2fa954c6657148a07b81e57ef7d 319 Gene3D G3DSA:3.40.190.10 196 275 1.3E-16 T 23-04-2016 RR42_RS00620 dcb5d2fa954c6657148a07b81e57ef7d 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 3.5E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS00620 dcb5d2fa954c6657148a07b81e57ef7d 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 3.5E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS00620 dcb5d2fa954c6657148a07b81e57ef7d 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.5E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS00620 dcb5d2fa954c6657148a07b81e57ef7d 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 26 84 2.4E-21 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS00620 dcb5d2fa954c6657148a07b81e57ef7d 319 SUPERFAMILY SSF53850 111 309 7.24E-38 T 23-04-2016 RR42_RS05690 93ca1a5f255d285a3eca9435966f92e4 209 Gene3D G3DSA:3.40.50.300 78 202 1.7E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05690 93ca1a5f255d285a3eca9435966f92e4 209 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 12 206 4.9E-99 T 23-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 RR42_RS05690 93ca1a5f255d285a3eca9435966f92e4 209 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 14 184 8.6E-38 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RR42_RS05690 93ca1a5f255d285a3eca9435966f92e4 209 SUPERFAMILY SSF52540 7 203 1.19E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05690 93ca1a5f255d285a3eca9435966f92e4 209 PIRSF PIRSF005624 1 207 1.0E-47 T 23-04-2016 RR42_RS05690 93ca1a5f255d285a3eca9435966f92e4 209 Gene3D G3DSA:3.40.50.300 5 72 1.6E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05690 93ca1a5f255d285a3eca9435966f92e4 209 Hamap MF_01389 Urease accessory protein UreG [ureG]. 10 208 46.81 T 23-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 RR42_RS05690 93ca1a5f255d285a3eca9435966f92e4 209 PANTHER PTHR31715 11 207 2.6E-123 T 23-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 RR42_RS18945 cc7ea5baf89d34fccd5d7305f62ba9a5 102 SUPERFAMILY SSF52091 2 84 4.71E-13 T 23-04-2016 IPR002645 STAS domain RR42_RS18945 cc7ea5baf89d34fccd5d7305f62ba9a5 102 Gene3D G3DSA:3.30.750.24 4 84 9.9E-12 T 23-04-2016 IPR002645 STAS domain RR42_RS18945 cc7ea5baf89d34fccd5d7305f62ba9a5 102 Pfam PF13466 STAS domain 2 80 1.0E-18 T 23-04-2016 IPR002645 STAS domain RR42_RS34685 0855f8ad7c3a3a9ec4ce6fb82a6dcb01 280 SUPERFAMILY SSF50156 168 280 3.79E-16 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS34685 0855f8ad7c3a3a9ec4ce6fb82a6dcb01 280 PANTHER PTHR22939 18 280 7.2E-96 T 23-04-2016 RR42_RS34685 0855f8ad7c3a3a9ec4ce6fb82a6dcb01 280 Gene3D G3DSA:2.40.10.10 98 200 4.3E-41 T 23-04-2016 RR42_RS34685 0855f8ad7c3a3a9ec4ce6fb82a6dcb01 280 Gene3D G3DSA:2.30.42.10 201 280 3.0E-18 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS34685 0855f8ad7c3a3a9ec4ce6fb82a6dcb01 280 Pfam PF13365 Trypsin-like peptidase domain 27 160 1.6E-30 T 23-04-2016 RR42_RS34685 0855f8ad7c3a3a9ec4ce6fb82a6dcb01 280 SMART SM00228 199 280 3.4E-4 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS34685 0855f8ad7c3a3a9ec4ce6fb82a6dcb01 280 PRINTS PR00834 HtrA/DegQ protease family signature 36 48 9.2E-47 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS34685 0855f8ad7c3a3a9ec4ce6fb82a6dcb01 280 PRINTS PR00834 HtrA/DegQ protease family signature 97 121 9.2E-47 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS34685 0855f8ad7c3a3a9ec4ce6fb82a6dcb01 280 PRINTS PR00834 HtrA/DegQ protease family signature 57 77 9.2E-47 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS34685 0855f8ad7c3a3a9ec4ce6fb82a6dcb01 280 PRINTS PR00834 HtrA/DegQ protease family signature 131 148 9.2E-47 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS34685 0855f8ad7c3a3a9ec4ce6fb82a6dcb01 280 PRINTS PR00834 HtrA/DegQ protease family signature 153 170 9.2E-47 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS34685 0855f8ad7c3a3a9ec4ce6fb82a6dcb01 280 PRINTS PR00834 HtrA/DegQ protease family signature 239 251 9.2E-47 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS34685 0855f8ad7c3a3a9ec4ce6fb82a6dcb01 280 Pfam PF13180 PDZ domain 200 280 1.2E-7 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS34685 0855f8ad7c3a3a9ec4ce6fb82a6dcb01 280 SUPERFAMILY SSF50494 14 208 5.56E-57 T 23-04-2016 IPR009003 Peptidase S1, PA clan RR42_RS34685 0855f8ad7c3a3a9ec4ce6fb82a6dcb01 280 PANTHER PTHR22939:SF98 18 280 7.2E-96 T 23-04-2016 RR42_RS34685 0855f8ad7c3a3a9ec4ce6fb82a6dcb01 280 Gene3D G3DSA:2.40.10.10 22 97 1.1E-26 T 23-04-2016 RR42_RS02195 e3c381909d6763c16e6754d2bf15f2a7 291 PANTHER PTHR30389 3 287 5.0E-85 T 23-04-2016 RR42_RS02195 e3c381909d6763c16e6754d2bf15f2a7 291 Pfam PF05681 Fumarate hydratase (Fumerase) 10 279 6.8E-85 T 23-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 RR42_RS02195 e3c381909d6763c16e6754d2bf15f2a7 291 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 9 280 4.4E-83 T 23-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 RR42_RS00275 40a47163bba44ed40800394694599fed 522 PANTHER PTHR30536 7 522 3.9E-207 T 23-04-2016 RR42_RS00275 40a47163bba44ed40800394694599fed 522 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 120 520 2.9E-160 T 23-04-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 RR42_RS00275 40a47163bba44ed40800394694599fed 522 Pfam PF08666 SAF domain 26 94 2.0E-12 T 23-04-2016 IPR013974 SAF domain RR42_RS00275 40a47163bba44ed40800394694599fed 522 SMART SM00858 26 95 2.5E-15 T 23-04-2016 IPR013974 SAF domain RR42_RS00275 40a47163bba44ed40800394694599fed 522 PANTHER PTHR30536:SF5 7 522 3.9E-207 T 23-04-2016 RR42_RS01160 2725cd3133fd8984ba8da3ec801d4fed 390 PANTHER PTHR32268 14 388 1.1E-170 T 23-04-2016 RR42_RS01160 2725cd3133fd8984ba8da3ec801d4fed 390 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 16 383 48.824 T 23-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 RR42_RS01160 2725cd3133fd8984ba8da3ec801d4fed 390 Gene3D G3DSA:3.40.50.1820 27 370 5.7E-34 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS01160 2725cd3133fd8984ba8da3ec801d4fed 390 PANTHER PTHR32268:SF11 14 388 1.1E-170 T 23-04-2016 RR42_RS01160 2725cd3133fd8984ba8da3ec801d4fed 390 SUPERFAMILY SSF53474 21 379 6.17E-102 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS01160 2725cd3133fd8984ba8da3ec801d4fed 390 Pfam PF00561 alpha/beta hydrolase fold 59 369 3.5E-34 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS01160 2725cd3133fd8984ba8da3ec801d4fed 390 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 29 380 5.2E-140 T 23-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 RR42_RS01160 2725cd3133fd8984ba8da3ec801d4fed 390 PIRSF PIRSF000443 6 389 4.9E-139 T 23-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 RR42_RS10935 d9ee148274f59ae134ddab5d727b5471 299 SUPERFAMILY SSF46785 5 114 3.07E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS10935 d9ee148274f59ae134ddab5d727b5471 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.9E-16 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS10935 d9ee148274f59ae134ddab5d727b5471 299 Gene3D G3DSA:3.40.190.10 192 240 5.9E-5 T 23-04-2016 RR42_RS10935 d9ee148274f59ae134ddab5d727b5471 299 PANTHER PTHR30579 1 298 2.0E-58 T 23-04-2016 RR42_RS10935 d9ee148274f59ae134ddab5d727b5471 299 PANTHER PTHR30579:SF0 1 298 2.0E-58 T 23-04-2016 RR42_RS10935 d9ee148274f59ae134ddab5d727b5471 299 SUPERFAMILY SSF53850 92 289 1.1E-22 T 23-04-2016 RR42_RS10935 d9ee148274f59ae134ddab5d727b5471 299 Gene3D G3DSA:3.40.190.10 92 191 8.3E-18 T 23-04-2016 RR42_RS10935 d9ee148274f59ae134ddab5d727b5471 299 Pfam PF03466 LysR substrate binding domain 92 284 2.5E-24 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS10935 d9ee148274f59ae134ddab5d727b5471 299 Gene3D G3DSA:1.10.10.10 6 89 3.4E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19060 c320f6748523d25270a897c3aed5ee00 333 PANTHER PTHR19372:SF1 39 328 1.1E-139 T 23-04-2016 RR42_RS19060 c320f6748523d25270a897c3aed5ee00 333 Gene3D G3DSA:3.90.420.10 72 330 8.1E-71 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RR42_RS19060 c320f6748523d25270a897c3aed5ee00 333 SUPERFAMILY SSF56524 72 329 3.4E-91 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RR42_RS19060 c320f6748523d25270a897c3aed5ee00 333 PANTHER PTHR19372 39 328 1.1E-139 T 23-04-2016 RR42_RS19060 c320f6748523d25270a897c3aed5ee00 333 Pfam PF00174 Oxidoreductase molybdopterin binding domain 107 261 9.4E-30 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RR42_RS19060 c320f6748523d25270a897c3aed5ee00 333 Hamap MF_01206 Sulfoxide reductase catalytic subunit YedY [yedY]. 5 333 59.557 T 23-04-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 RR42_RS02685 20d635c050cc288a9a6201837dfe63c9 224 SUPERFAMILY SSF53254 13 215 2.55E-63 T 23-04-2016 IPR029033 Histidine phosphatase superfamily RR42_RS02685 20d635c050cc288a9a6201837dfe63c9 224 PANTHER PTHR23029:SF1 15 212 5.4E-61 T 23-04-2016 RR42_RS02685 20d635c050cc288a9a6201837dfe63c9 224 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 17 26 - T 23-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 RR42_RS02685 20d635c050cc288a9a6201837dfe63c9 224 SMART SM00855 14 168 4.2E-24 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RR42_RS02685 20d635c050cc288a9a6201837dfe63c9 224 Gene3D G3DSA:3.40.50.1240 13 216 1.4E-65 T 23-04-2016 IPR029033 Histidine phosphatase superfamily RR42_RS02685 20d635c050cc288a9a6201837dfe63c9 224 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 15 207 4.4E-67 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RR42_RS02685 20d635c050cc288a9a6201837dfe63c9 224 PANTHER PTHR23029 15 212 5.4E-61 T 23-04-2016 RR42_RS11985 7f1c57a426e2d3050e08f7c0db0ba411 306 SUPERFAMILY SSF161098 91 288 1.96E-22 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS11985 7f1c57a426e2d3050e08f7c0db0ba411 306 PANTHER PTHR30465 1 305 9.5E-175 T 23-04-2016 RR42_RS11985 7f1c57a426e2d3050e08f7c0db0ba411 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 304 2.0E-43 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS11985 7f1c57a426e2d3050e08f7c0db0ba411 306 Gene3D G3DSA:1.10.3720.10 86 299 1.6E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS11985 7f1c57a426e2d3050e08f7c0db0ba411 306 PANTHER PTHR30465:SF59 1 305 9.5E-175 T 23-04-2016 RR42_RS00475 454c239df86c9a1cf62793b77b37bc55 29 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 7 29 1.1E-10 T 23-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 RR42_RS00475 454c239df86c9a1cf62793b77b37bc55 29 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 7 29 3.9E-9 T 23-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 RR42_RS17260 745b5bce92f5f9e9a11faa6ca13b9a0a 224 Pfam PF00005 ABC transporter 24 170 3.3E-25 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS17260 745b5bce92f5f9e9a11faa6ca13b9a0a 224 Gene3D G3DSA:3.40.50.300 3 204 2.9E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17260 745b5bce92f5f9e9a11faa6ca13b9a0a 224 PANTHER PTHR24220 6 204 5.9E-55 T 23-04-2016 RR42_RS17260 745b5bce92f5f9e9a11faa6ca13b9a0a 224 SUPERFAMILY SSF52540 3 214 4.61E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17260 745b5bce92f5f9e9a11faa6ca13b9a0a 224 SMART SM00382 29 216 1.4E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS12705 13a1ce666221b5fe51b4135e02f17cae 435 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 182 197 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RR42_RS12705 13a1ce666221b5fe51b4135e02f17cae 435 PANTHER PTHR32071 23 429 1.0E-139 T 23-04-2016 RR42_RS12705 13a1ce666221b5fe51b4135e02f17cae 435 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 120 133 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RR42_RS12705 13a1ce666221b5fe51b4135e02f17cae 435 SUPERFAMILY SSF46689 311 418 5.38E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS12705 13a1ce666221b5fe51b4135e02f17cae 435 Gene3D G3DSA:1.10.8.60 269 346 1.7E-19 T 23-04-2016 RR42_RS12705 13a1ce666221b5fe51b4135e02f17cae 435 Gene3D G3DSA:3.40.50.300 94 268 1.0E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12705 13a1ce666221b5fe51b4135e02f17cae 435 SUPERFAMILY SSF52540 98 329 6.92E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12705 13a1ce666221b5fe51b4135e02f17cae 435 Gene3D G3DSA:1.10.10.60 364 418 2.6E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS12705 13a1ce666221b5fe51b4135e02f17cae 435 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 309 318 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RR42_RS12705 13a1ce666221b5fe51b4135e02f17cae 435 Pfam PF00158 Sigma-54 interaction domain 98 262 3.5E-69 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RR42_RS12705 13a1ce666221b5fe51b4135e02f17cae 435 SMART SM00382 116 259 5.0E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS09665 288c68ea4d708266a8ed934ca0452dc8 564 Gene3D G3DSA:3.10.20.310 78 154 3.5E-16 T 23-04-2016 RR42_RS09665 288c68ea4d708266a8ed934ca0452dc8 564 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 171 487 2.2E-12 T 23-04-2016 IPR005565 Haemolysin activator HlyB RR42_RS09665 288c68ea4d708266a8ed934ca0452dc8 564 PANTHER PTHR34597:SF2 13 564 4.9E-98 T 23-04-2016 RR42_RS09665 288c68ea4d708266a8ed934ca0452dc8 564 PIRSF PIRSF029745 1 564 4.8E-102 T 23-04-2016 IPR027282 Two partner secretion pathway transporter GO:0015031 RR42_RS09665 288c68ea4d708266a8ed934ca0452dc8 564 Pfam PF08479 POTRA domain, ShlB-type 103 154 2.5E-11 T 23-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type RR42_RS09665 288c68ea4d708266a8ed934ca0452dc8 564 PANTHER PTHR34597 13 564 4.9E-98 T 23-04-2016 RR42_RS09665 288c68ea4d708266a8ed934ca0452dc8 564 Gene3D G3DSA:2.40.160.50 183 563 2.1E-82 T 23-04-2016 RR42_RS09025 a32c8914d0b60134566354db02b487de 424 SMART SM00994 12 51 8.7E-24 T 23-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 RR42_RS09025 a32c8914d0b60134566354db02b487de 424 PANTHER PTHR11262 11 416 8.5E-247 T 23-04-2016 RR42_RS09025 a32c8914d0b60134566354db02b487de 424 Gene3D G3DSA:1.10.8.60 317 418 3.7E-36 T 23-04-2016 RR42_RS09025 a32c8914d0b60134566354db02b487de 424 Gene3D G3DSA:3.40.50.300 68 256 6.1E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS09025 a32c8914d0b60134566354db02b487de 424 Gene3D G3DSA:3.40.50.300 295 312 6.1E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS09025 a32c8914d0b60134566354db02b487de 424 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 9 412 2.3E-205 T 23-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 RR42_RS09025 a32c8914d0b60134566354db02b487de 424 SUPERFAMILY SSF52540 64 401 9.41E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS09025 a32c8914d0b60134566354db02b487de 424 Pfam PF07724 AAA domain (Cdc48 subfamily) 115 311 2.5E-49 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RR42_RS09025 a32c8914d0b60134566354db02b487de 424 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 318 389 2.1E-15 T 23-04-2016 IPR019489 Clp ATPase, C-terminal RR42_RS09025 a32c8914d0b60134566354db02b487de 424 SMART SM00382 114 334 4.2E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS09025 a32c8914d0b60134566354db02b487de 424 SMART SM01086 318 412 3.0E-33 T 23-04-2016 IPR019489 Clp ATPase, C-terminal RR42_RS09025 a32c8914d0b60134566354db02b487de 424 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 416 53.321 T 23-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 RR42_RS09025 a32c8914d0b60134566354db02b487de 424 Pfam PF06689 ClpX C4-type zinc finger 13 49 3.4E-20 T 23-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 RR42_RS09025 a32c8914d0b60134566354db02b487de 424 SUPERFAMILY SSF57716 13 48 1.01E-11 T 23-04-2016 RR42_RS18910 530c6eef1fd27ef132121656eec5373c 366 PANTHER PTHR11751 7 359 1.2E-64 T 23-04-2016 RR42_RS18910 530c6eef1fd27ef132121656eec5373c 366 Gene3D G3DSA:3.40.640.10 44 264 1.9E-59 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS18910 530c6eef1fd27ef132121656eec5373c 366 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 12 364 54.296 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 RR42_RS18910 530c6eef1fd27ef132121656eec5373c 366 Pfam PF00155 Aminotransferase class I and II 37 357 4.9E-42 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RR42_RS18910 530c6eef1fd27ef132121656eec5373c 366 SUPERFAMILY SSF53383 14 363 2.31E-72 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS18910 530c6eef1fd27ef132121656eec5373c 366 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 14 361 2.2E-93 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 RR42_RS18910 530c6eef1fd27ef132121656eec5373c 366 PANTHER PTHR11751:SF398 7 359 1.2E-64 T 23-04-2016 RR42_RS18910 530c6eef1fd27ef132121656eec5373c 366 Gene3D G3DSA:3.90.1150.10 265 364 1.6E-23 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS00015 79197022173d0b564e51139c46dec068 845 SUPERFAMILY SSF56719 426 592 8.63E-87 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RR42_RS00015 79197022173d0b564e51139c46dec068 845 SUPERFAMILY SSF56719 771 835 8.63E-87 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RR42_RS00015 79197022173d0b564e51139c46dec068 845 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 17 845 1.9E-285 T 23-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 SMART SM00387 43 208 3.7E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS00015 79197022173d0b564e51139c46dec068 845 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 774 834 1.3E-26 T 23-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 14 845 97.405 T 23-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 Gene3D G3DSA:3.30.565.10 17 250 1.8E-88 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS00015 79197022173d0b564e51139c46dec068 845 SUPERFAMILY SSF54211 253 424 1.02E-58 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RR42_RS00015 79197022173d0b564e51139c46dec068 845 Gene3D G3DSA:3.40.50.670 759 827 1.0E-98 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 Gene3D G3DSA:3.40.50.670 436 582 1.0E-98 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 SMART SM00433 47 625 6.4E-237 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 PRINTS PR01159 DNA gyrase subunit B signature 213 228 1.17E-72 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 PRINTS PR01159 DNA gyrase subunit B signature 17 27 1.17E-72 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 PRINTS PR01159 DNA gyrase subunit B signature 252 274 1.17E-72 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 PRINTS PR01159 DNA gyrase subunit B signature 406 426 1.17E-72 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 PRINTS PR01159 DNA gyrase subunit B signature 344 360 1.17E-72 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 PRINTS PR01159 DNA gyrase subunit B signature 814 830 1.17E-72 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 PRINTS PR01159 DNA gyrase subunit B signature 798 810 1.17E-72 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 PRINTS PR01159 DNA gyrase subunit B signature 392 406 1.17E-72 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 PRINTS PR01159 DNA gyrase subunit B signature 502 511 1.17E-72 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 PRINTS PR01159 DNA gyrase subunit B signature 228 241 1.17E-72 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 44 207 9.2E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS00015 79197022173d0b564e51139c46dec068 845 Pfam PF01751 Toprim domain 451 563 8.6E-18 T 23-04-2016 IPR006171 Toprim domain RR42_RS00015 79197022173d0b564e51139c46dec068 845 SUPERFAMILY SSF55874 17 248 1.44E-61 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS00015 79197022173d0b564e51139c46dec068 845 PRINTS PR00418 DNA topoisomerase II family signature 519 535 6.39E-66 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 PRINTS PR00418 DNA topoisomerase II family signature 537 554 6.39E-66 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 PRINTS PR00418 DNA topoisomerase II family signature 300 313 6.39E-66 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 PRINTS PR00418 DNA topoisomerase II family signature 47 62 6.39E-66 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 PRINTS PR00418 DNA topoisomerase II family signature 557 569 6.39E-66 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 PRINTS PR00418 DNA topoisomerase II family signature 129 143 6.39E-66 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 PRINTS PR00418 DNA topoisomerase II family signature 82 95 6.39E-66 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 PRINTS PR00418 DNA topoisomerase II family signature 452 466 6.39E-66 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 PRINTS PR00418 DNA topoisomerase II family signature 777 793 6.39E-66 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 Pfam PF00204 DNA gyrase B 253 422 7.1E-56 T 23-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 ProSitePatterns PS00177 DNA topoisomerase II signature. 454 462 - T 23-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00015 79197022173d0b564e51139c46dec068 845 Gene3D G3DSA:3.30.230.10 252 424 1.9E-73 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RR42_RS00015 79197022173d0b564e51139c46dec068 845 PANTHER PTHR10169 9 152 2.6E-273 T 23-04-2016 RR42_RS00015 79197022173d0b564e51139c46dec068 845 PANTHER PTHR10169 765 845 2.6E-273 T 23-04-2016 RR42_RS00015 79197022173d0b564e51139c46dec068 845 PANTHER PTHR10169 182 585 2.6E-273 T 23-04-2016 RR42_RS07445 35126a4abf15f30351212dcfc112d89a 264 PANTHER PTHR24220:SF534 3 250 1.6E-120 T 23-04-2016 RR42_RS07445 35126a4abf15f30351212dcfc112d89a 264 SUPERFAMILY SSF52540 1 233 4.15E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07445 35126a4abf15f30351212dcfc112d89a 264 PANTHER PTHR24220 3 250 1.6E-120 T 23-04-2016 RR42_RS07445 35126a4abf15f30351212dcfc112d89a 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS07445 35126a4abf15f30351212dcfc112d89a 264 SMART SM00382 31 243 1.5E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS07445 35126a4abf15f30351212dcfc112d89a 264 Gene3D G3DSA:3.40.50.300 1 232 4.5E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07445 35126a4abf15f30351212dcfc112d89a 264 Pfam PF00005 ABC transporter 22 177 1.7E-24 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS19085 3a1244ec8a364664fd8fd056aee64d33 728 PANTHER PTHR31566 587 714 2.2E-42 T 23-04-2016 RR42_RS19085 3a1244ec8a364664fd8fd056aee64d33 728 PANTHER PTHR31566 16 194 2.2E-42 T 23-04-2016 RR42_RS19085 3a1244ec8a364664fd8fd056aee64d33 728 PANTHER PTHR31566 229 448 2.2E-42 T 23-04-2016 RR42_RS19085 3a1244ec8a364664fd8fd056aee64d33 728 Pfam PF05140 ResB-like family 28 707 4.1E-165 T 23-04-2016 IPR007816 ResB-like domain RR42_RS14100 d302b53658a85b03f19a44b1ab85475d 249 SUPERFAMILY SSF51735 6 248 1.08E-86 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS14100 d302b53658a85b03f19a44b1ab85475d 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RR42_RS14100 d302b53658a85b03f19a44b1ab85475d 249 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 247 5.8E-101 T 23-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RR42_RS14100 d302b53658a85b03f19a44b1ab85475d 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 246 1.1E-66 T 23-04-2016 RR42_RS14100 d302b53658a85b03f19a44b1ab85475d 249 PANTHER PTHR24322:SF635 12 140 6.4E-62 T 23-04-2016 RR42_RS14100 d302b53658a85b03f19a44b1ab85475d 249 PANTHER PTHR24322:SF635 156 188 6.4E-62 T 23-04-2016 RR42_RS14100 d302b53658a85b03f19a44b1ab85475d 249 PANTHER PTHR24322 12 140 6.4E-62 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS14100 d302b53658a85b03f19a44b1ab85475d 249 PANTHER PTHR24322 156 188 6.4E-62 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS14100 d302b53658a85b03f19a44b1ab85475d 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 220 5.4E-6 T 23-04-2016 RR42_RS14100 d302b53658a85b03f19a44b1ab85475d 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.1E-49 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS14100 d302b53658a85b03f19a44b1ab85475d 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.1E-49 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS14100 d302b53658a85b03f19a44b1ab85475d 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.1E-49 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS14100 d302b53658a85b03f19a44b1ab85475d 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.1E-49 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS14100 d302b53658a85b03f19a44b1ab85475d 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.1E-49 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS14100 d302b53658a85b03f19a44b1ab85475d 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.1E-49 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS14100 d302b53658a85b03f19a44b1ab85475d 249 Gene3D G3DSA:3.40.50.720 1 248 6.7E-89 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS14100 d302b53658a85b03f19a44b1ab85475d 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.5E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS14100 d302b53658a85b03f19a44b1ab85475d 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.5E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS14100 d302b53658a85b03f19a44b1ab85475d 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.5E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS01465 c88fbe7cf1cc255edffa2c9ceb52d6f4 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 596 2.6E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS01465 c88fbe7cf1cc255edffa2c9ceb52d6f4 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 615 633 2.6E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS01465 c88fbe7cf1cc255edffa2c9ceb52d6f4 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 610 2.6E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS01465 c88fbe7cf1cc255edffa2c9ceb52d6f4 655 Pfam PF07695 7TM diverse intracellular signalling 197 396 1.7E-13 T 23-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 RR42_RS01465 c88fbe7cf1cc255edffa2c9ceb52d6f4 655 SUPERFAMILY SSF47384 422 483 9.81E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS01465 c88fbe7cf1cc255edffa2c9ceb52d6f4 655 Gene3D G3DSA:1.10.287.130 423 485 5.6E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS01465 c88fbe7cf1cc255edffa2c9ceb52d6f4 655 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 541 653 2.0E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS01465 c88fbe7cf1cc255edffa2c9ceb52d6f4 655 PANTHER PTHR24423 409 652 8.4E-35 T 23-04-2016 RR42_RS01465 c88fbe7cf1cc255edffa2c9ceb52d6f4 655 PANTHER PTHR24423 103 171 8.4E-35 T 23-04-2016 RR42_RS01465 c88fbe7cf1cc255edffa2c9ceb52d6f4 655 Pfam PF07696 7TMR-DISM extracellular 2 50 182 2.8E-22 T 23-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 RR42_RS01465 c88fbe7cf1cc255edffa2c9ceb52d6f4 655 SUPERFAMILY SSF55874 495 653 6.55E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS01465 c88fbe7cf1cc255edffa2c9ceb52d6f4 655 SMART SM00387 541 655 1.6E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS01465 c88fbe7cf1cc255edffa2c9ceb52d6f4 655 Gene3D G3DSA:3.30.565.10 499 653 3.3E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS01785 8eef194fb1f08fdb840287c06e1caecf 151 Pfam PF03610 PTS system fructose IIA component 3 106 6.9E-18 T 23-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RR42_RS01785 8eef194fb1f08fdb840287c06e1caecf 151 SUPERFAMILY SSF53062 1 127 1.31E-28 T 23-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RR42_RS01785 8eef194fb1f08fdb840287c06e1caecf 151 Gene3D G3DSA:3.40.50.510 1 129 4.2E-37 T 23-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RR42_RS01785 8eef194fb1f08fdb840287c06e1caecf 151 PANTHER PTHR33799 2 127 4.2E-24 T 23-04-2016 RR42_RS17995 c3a0ce3691c767f6da6fa132dbea1e8f 203 PANTHER PTHR10695 1 198 1.1E-63 T 23-04-2016 RR42_RS17995 c3a0ce3691c767f6da6fa132dbea1e8f 203 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 185 1.9E-43 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 RR42_RS17995 c3a0ce3691c767f6da6fa132dbea1e8f 203 SUPERFAMILY SSF52540 1 193 3.26E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17995 c3a0ce3691c767f6da6fa132dbea1e8f 203 Pfam PF01121 Dephospho-CoA kinase 3 181 6.1E-56 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 RR42_RS17995 c3a0ce3691c767f6da6fa132dbea1e8f 203 Gene3D G3DSA:3.40.50.300 1 197 1.2E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17995 c3a0ce3691c767f6da6fa132dbea1e8f 203 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 200 27.338 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 RR42_RS15820 2c2f4c4a64cb86b0a80ceda03e3ec835 453 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 433 8.7E-133 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RR42_RS15820 2c2f4c4a64cb86b0a80ceda03e3ec835 453 PANTHER PTHR11374:SF18 1 452 8.1E-244 T 23-04-2016 RR42_RS15820 2c2f4c4a64cb86b0a80ceda03e3ec835 453 SMART SM00984 325 437 7.9E-50 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RR42_RS15820 2c2f4c4a64cb86b0a80ceda03e3ec835 453 Gene3D G3DSA:3.40.50.720 1 211 3.0E-77 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS15820 2c2f4c4a64cb86b0a80ceda03e3ec835 453 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 325 437 3.9E-32 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RR42_RS15820 2c2f4c4a64cb86b0a80ceda03e3ec835 453 SUPERFAMILY SSF51735 1 193 1.08E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS15820 2c2f4c4a64cb86b0a80ceda03e3ec835 453 SUPERFAMILY SSF48179 209 306 2.72E-31 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RR42_RS15820 2c2f4c4a64cb86b0a80ceda03e3ec835 453 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 186 6.1E-67 T 23-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 RR42_RS15820 2c2f4c4a64cb86b0a80ceda03e3ec835 453 PIRSF PIRSF000124 1 452 2.3E-148 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RR42_RS15820 2c2f4c4a64cb86b0a80ceda03e3ec835 453 Gene3D G3DSA:3.40.50.720 240 452 3.2E-74 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS15820 2c2f4c4a64cb86b0a80ceda03e3ec835 453 PIRSF PIRSF500134 1 453 2.2E-188 T 23-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 RR42_RS15820 2c2f4c4a64cb86b0a80ceda03e3ec835 453 SUPERFAMILY SSF52413 310 448 8.89E-40 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RR42_RS15820 2c2f4c4a64cb86b0a80ceda03e3ec835 453 PANTHER PTHR11374 1 452 8.1E-244 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RR42_RS15820 2c2f4c4a64cb86b0a80ceda03e3ec835 453 Gene3D G3DSA:1.20.5.100 212 239 9.9E-18 T 23-04-2016 RR42_RS15820 2c2f4c4a64cb86b0a80ceda03e3ec835 453 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 209 301 2.2E-36 T 23-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 RR42_RS16975 40b70f719f4298d6af1a8ddb50a680a8 311 PANTHER PTHR11795 1 310 3.4E-117 T 23-04-2016 RR42_RS16975 40b70f719f4298d6af1a8ddb50a680a8 311 PANTHER PTHR11795:SF371 1 310 3.4E-117 T 23-04-2016 RR42_RS16975 40b70f719f4298d6af1a8ddb50a680a8 311 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 295 1.3E-45 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RR42_RS16795 fad675e2666bd8843a4f0858754a91d6 383 SUPERFAMILY SSF56645 8 245 7.07E-70 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RR42_RS16795 fad675e2666bd8843a4f0858754a91d6 383 PANTHER PTHR10909 9 381 5.3E-161 T 23-04-2016 RR42_RS16795 fad675e2666bd8843a4f0858754a91d6 383 Gene3D G3DSA:1.20.140.10 220 381 2.8E-54 T 23-04-2016 RR42_RS16795 fad675e2666bd8843a4f0858754a91d6 383 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 340 359 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RR42_RS16795 fad675e2666bd8843a4f0858754a91d6 383 Gene3D G3DSA:2.40.110.10 125 219 3.9E-32 T 23-04-2016 RR42_RS16795 fad675e2666bd8843a4f0858754a91d6 383 Gene3D G3DSA:1.10.540.10 11 122 4.5E-32 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS16795 fad675e2666bd8843a4f0858754a91d6 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 381 3.2E-42 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS16795 fad675e2666bd8843a4f0858754a91d6 383 PANTHER PTHR10909:SF190 9 381 5.3E-161 T 23-04-2016 RR42_RS16795 fad675e2666bd8843a4f0858754a91d6 383 SUPERFAMILY SSF47203 232 381 3.38E-46 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS16795 fad675e2666bd8843a4f0858754a91d6 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 121 1.2E-28 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS16795 fad675e2666bd8843a4f0858754a91d6 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 220 1.1E-21 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RR42_RS11240 d22c2de4e7894a577a0b9b8eeffcda76 487 Pfam PF07969 Amidohydrolase family 352 465 1.4E-16 T 23-04-2016 IPR013108 Amidohydrolase 3 RR42_RS11240 d22c2de4e7894a577a0b9b8eeffcda76 487 Pfam PF07969 Amidohydrolase family 52 255 2.4E-16 T 23-04-2016 IPR013108 Amidohydrolase 3 RR42_RS11240 d22c2de4e7894a577a0b9b8eeffcda76 487 Gene3D G3DSA:3.30.1490.130 290 345 7.4E-24 T 23-04-2016 IPR023100 D-aminoacylase, insert domain GO:0016811 RR42_RS11240 d22c2de4e7894a577a0b9b8eeffcda76 487 Gene3D G3DSA:3.20.20.140 70 287 3.1E-110 T 23-04-2016 RR42_RS11240 d22c2de4e7894a577a0b9b8eeffcda76 487 Gene3D G3DSA:3.20.20.140 346 406 3.1E-110 T 23-04-2016 RR42_RS11240 d22c2de4e7894a577a0b9b8eeffcda76 487 PANTHER PTHR22935:SF55 317 483 1.0E-28 T 23-04-2016 RR42_RS11240 d22c2de4e7894a577a0b9b8eeffcda76 487 SUPERFAMILY SSF51556 63 421 2.21E-83 T 23-04-2016 IPR032466 Metal-dependent hydrolase RR42_RS11240 d22c2de4e7894a577a0b9b8eeffcda76 487 Gene3D G3DSA:2.30.40.10 407 469 9.3E-9 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS11240 d22c2de4e7894a577a0b9b8eeffcda76 487 SUPERFAMILY SSF51338 9 62 2.74E-20 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS11240 d22c2de4e7894a577a0b9b8eeffcda76 487 SUPERFAMILY SSF51338 421 476 2.74E-20 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS11240 d22c2de4e7894a577a0b9b8eeffcda76 487 PANTHER PTHR22935 317 483 1.0E-28 T 23-04-2016 RR42_RS11240 d22c2de4e7894a577a0b9b8eeffcda76 487 Gene3D G3DSA:2.30.40.10 10 69 2.7E-18 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS00495 c58312728195893184d16afde1de1b61 977 PANTHER PTHR24423 16 209 2.7E-128 T 23-04-2016 RR42_RS00495 c58312728195893184d16afde1de1b61 977 PANTHER PTHR24423 715 950 2.7E-128 T 23-04-2016 RR42_RS00495 c58312728195893184d16afde1de1b61 977 PANTHER PTHR24423 263 321 2.7E-128 T 23-04-2016 RR42_RS00495 c58312728195893184d16afde1de1b61 977 Gene3D G3DSA:3.40.50.300 30 241 2.4E-95 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS00495 c58312728195893184d16afde1de1b61 977 SUPERFAMILY SSF55781 561 701 3.38E-5 T 23-04-2016 IPR029016 GAF domain-like RR42_RS00495 c58312728195893184d16afde1de1b61 977 SUPERFAMILY SSF55874 774 942 1.83E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS00495 c58312728195893184d16afde1de1b61 977 SMART SM00387 828 940 5.9E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS00495 c58312728195893184d16afde1de1b61 977 Pfam PF13493 Domain of unknown function (DUF4118) 453 559 3.1E-31 T 23-04-2016 IPR025201 Sensor protein KdpD, transmembrane domain RR42_RS00495 c58312728195893184d16afde1de1b61 977 PANTHER PTHR24423:SF562 16 209 2.7E-128 T 23-04-2016 RR42_RS00495 c58312728195893184d16afde1de1b61 977 PANTHER PTHR24423:SF562 715 950 2.7E-128 T 23-04-2016 RR42_RS00495 c58312728195893184d16afde1de1b61 977 PANTHER PTHR24423:SF562 263 321 2.7E-128 T 23-04-2016 RR42_RS00495 c58312728195893184d16afde1de1b61 977 Pfam PF00512 His Kinase A (phospho-acceptor) domain 718 783 2.2E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS00495 c58312728195893184d16afde1de1b61 977 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 31 242 9.4E-93 T 23-04-2016 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 RR42_RS00495 c58312728195893184d16afde1de1b61 977 Gene3D G3DSA:3.30.450.40 558 707 1.5E-4 T 23-04-2016 IPR029016 GAF domain-like RR42_RS00495 c58312728195893184d16afde1de1b61 977 Gene3D G3DSA:1.10.287.130 713 769 5.0E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS00495 c58312728195893184d16afde1de1b61 977 SUPERFAMILY SSF47384 712 784 1.14E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS00495 c58312728195893184d16afde1de1b61 977 PRINTS PR00344 Bacterial sensor protein C-terminal signature 924 937 9.9E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS00495 c58312728195893184d16afde1de1b61 977 PRINTS PR00344 Bacterial sensor protein C-terminal signature 883 893 9.9E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS00495 c58312728195893184d16afde1de1b61 977 PRINTS PR00344 Bacterial sensor protein C-terminal signature 865 879 9.9E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS00495 c58312728195893184d16afde1de1b61 977 PRINTS PR00344 Bacterial sensor protein C-terminal signature 898 916 9.9E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS00495 c58312728195893184d16afde1de1b61 977 Gene3D G3DSA:1.20.120.620 451 553 3.5E-38 T 23-04-2016 RR42_RS00495 c58312728195893184d16afde1de1b61 977 Gene3D G3DSA:3.30.565.10 770 939 1.4E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS00495 c58312728195893184d16afde1de1b61 977 Pfam PF13492 GAF domain 579 698 1.5E-12 T 23-04-2016 IPR003018 GAF domain GO:0005515 RR42_RS00495 c58312728195893184d16afde1de1b61 977 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 832 938 2.2E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS00495 c58312728195893184d16afde1de1b61 977 Gene3D G3DSA:3.40.50.620 258 356 6.2E-4 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS00495 c58312728195893184d16afde1de1b61 977 SMART SM00388 717 784 3.0E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS02155 c431b135a7ffb1e6594dcf23c8370da2 184 Hamap MF_00984 Single-stranded DNA-binding protein. 4 112 38.34 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RR42_RS02155 c431b135a7ffb1e6594dcf23c8370da2 184 PANTHER PTHR10302 3 184 1.2E-49 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RR42_RS02155 c431b135a7ffb1e6594dcf23c8370da2 184 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 184 1.2E-53 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RR42_RS02155 c431b135a7ffb1e6594dcf23c8370da2 184 Gene3D G3DSA:2.40.50.140 153 184 1.4E-59 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS02155 c431b135a7ffb1e6594dcf23c8370da2 184 Gene3D G3DSA:2.40.50.140 1 111 1.4E-59 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS02155 c431b135a7ffb1e6594dcf23c8370da2 184 Pfam PF00436 Single-strand binding protein family 4 108 7.9E-42 T 23-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 RR42_RS02155 c431b135a7ffb1e6594dcf23c8370da2 184 SUPERFAMILY SSF50249 3 184 2.43E-60 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS04400 8a3eb5ab420858ec209828efd8c64455 219 SUPERFAMILY SSF161098 12 199 7.72E-44 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS04400 8a3eb5ab420858ec209828efd8c64455 219 PANTHER PTHR30614 4 219 1.2E-94 T 23-04-2016 RR42_RS04400 8a3eb5ab420858ec209828efd8c64455 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 214 2.6E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS04400 8a3eb5ab420858ec209828efd8c64455 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 108 4.2E-31 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RR42_RS04400 8a3eb5ab420858ec209828efd8c64455 219 Gene3D G3DSA:1.10.3720.10 11 213 7.4E-47 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS04400 8a3eb5ab420858ec209828efd8c64455 219 PANTHER PTHR30614:SF18 4 219 1.2E-94 T 23-04-2016 RR42_RS23430 4d248617f6760c6db39ae4d127b42260 271 PANTHER PTHR11835:SF37 15 271 9.1E-161 T 23-04-2016 RR42_RS23430 4d248617f6760c6db39ae4d127b42260 271 PANTHER PTHR11835 15 271 9.1E-161 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RR42_RS23430 4d248617f6760c6db39ae4d127b42260 271 Gene3D G3DSA:3.40.718.10 14 269 1.0E-75 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RR42_RS23430 4d248617f6760c6db39ae4d127b42260 271 SUPERFAMILY SSF53659 10 269 1.56E-77 T 23-04-2016 RR42_RS23430 4d248617f6760c6db39ae4d127b42260 271 SMART SM01329 16 271 1.9E-64 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RR42_RS23430 4d248617f6760c6db39ae4d127b42260 271 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 16 268 3.7E-52 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RR42_RS19220 01808bd25d8e4890a247222e71f404e0 138 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.666 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RR42_RS19220 01808bd25d8e4890a247222e71f404e0 138 PANTHER PTHR12220 1 136 5.2E-73 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RR42_RS19220 01808bd25d8e4890a247222e71f404e0 138 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 23-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19220 01808bd25d8e4890a247222e71f404e0 138 PRINTS PR00060 Ribosomal protein L16 signature 24 36 6.0E-39 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RR42_RS19220 01808bd25d8e4890a247222e71f404e0 138 PRINTS PR00060 Ribosomal protein L16 signature 58 87 6.0E-39 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RR42_RS19220 01808bd25d8e4890a247222e71f404e0 138 PRINTS PR00060 Ribosomal protein L16 signature 88 117 6.0E-39 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RR42_RS19220 01808bd25d8e4890a247222e71f404e0 138 PRINTS PR00060 Ribosomal protein L16 signature 42 53 6.0E-39 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RR42_RS19220 01808bd25d8e4890a247222e71f404e0 138 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 8.8E-60 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RR42_RS19220 01808bd25d8e4890a247222e71f404e0 138 Gene3D G3DSA:3.90.1170.10 22 135 4.5E-52 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RR42_RS19220 01808bd25d8e4890a247222e71f404e0 138 SUPERFAMILY SSF54686 1 134 1.57E-53 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RR42_RS19220 01808bd25d8e4890a247222e71f404e0 138 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 3.9E-48 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RR42_RS04335 4f040776fab6d1ef3ab5ec59ec08bec6 347 PANTHER PTHR30006 1 342 8.6E-137 T 23-04-2016 RR42_RS04335 4f040776fab6d1ef3ab5ec59ec08bec6 347 Gene3D G3DSA:3.40.190.10 132 277 1.1E-55 T 23-04-2016 RR42_RS04335 4f040776fab6d1ef3ab5ec59ec08bec6 347 PANTHER PTHR30006:SF4 1 342 8.6E-137 T 23-04-2016 RR42_RS04335 4f040776fab6d1ef3ab5ec59ec08bec6 347 Pfam PF13343 Bacterial extracellular solute-binding protein 79 315 6.9E-28 T 23-04-2016 RR42_RS04335 4f040776fab6d1ef3ab5ec59ec08bec6 347 PIRSF PIRSF002825 2 347 2.4E-92 T 23-04-2016 IPR026045 Ferric binding protein RR42_RS04335 4f040776fab6d1ef3ab5ec59ec08bec6 347 Gene3D G3DSA:3.40.190.10 7 128 3.7E-29 T 23-04-2016 RR42_RS04335 4f040776fab6d1ef3ab5ec59ec08bec6 347 Gene3D G3DSA:3.40.190.10 278 326 3.7E-29 T 23-04-2016 RR42_RS04335 4f040776fab6d1ef3ab5ec59ec08bec6 347 SUPERFAMILY SSF53850 33 342 9.12E-86 T 23-04-2016 RR42_RS11260 e5b0ba0eff602dd485d790fce3bb0e62 302 SUPERFAMILY SSF51621 6 296 4.93E-102 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS11260 e5b0ba0eff602dd485d790fce3bb0e62 302 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 10 298 50.102 T 23-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 RR42_RS11260 e5b0ba0eff602dd485d790fce3bb0e62 302 Pfam PF13714 Phosphoenolpyruvate phosphomutase 16 260 2.6E-49 T 23-04-2016 RR42_RS11260 e5b0ba0eff602dd485d790fce3bb0e62 302 ProSitePatterns PS00161 Isocitrate lyase signature. 127 132 - T 23-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 RR42_RS11260 e5b0ba0eff602dd485d790fce3bb0e62 302 PANTHER PTHR21631 11 298 2.0E-155 T 23-04-2016 RR42_RS11260 e5b0ba0eff602dd485d790fce3bb0e62 302 PANTHER PTHR21631:SF4 11 298 2.0E-155 T 23-04-2016 RR42_RS11260 e5b0ba0eff602dd485d790fce3bb0e62 302 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 13 297 5.6E-130 T 23-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 RR42_RS11260 e5b0ba0eff602dd485d790fce3bb0e62 302 Gene3D G3DSA:3.20.20.60 11 293 2.6E-99 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS01770 8b0dad7d8bce0f6749e0ed3657a94f73 269 PANTHER PTHR32552:SF23 55 263 3.1E-96 T 23-04-2016 RR42_RS01770 8b0dad7d8bce0f6749e0ed3657a94f73 269 PANTHER PTHR32552 55 263 3.1E-96 T 23-04-2016 RR42_RS01770 8b0dad7d8bce0f6749e0ed3657a94f73 269 SUPERFAMILY SSF53098 104 259 7.28E-35 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS01770 8b0dad7d8bce0f6749e0ed3657a94f73 269 Gene3D G3DSA:3.30.420.10 102 257 1.5E-31 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS01770 8b0dad7d8bce0f6749e0ed3657a94f73 269 Pfam PF00665 Integrase core domain 107 220 1.6E-24 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RR42_RS08380 8b0dad7d8bce0f6749e0ed3657a94f73 269 PANTHER PTHR32552:SF23 55 263 3.1E-96 T 23-04-2016 RR42_RS08380 8b0dad7d8bce0f6749e0ed3657a94f73 269 PANTHER PTHR32552 55 263 3.1E-96 T 23-04-2016 RR42_RS08380 8b0dad7d8bce0f6749e0ed3657a94f73 269 SUPERFAMILY SSF53098 104 259 7.28E-35 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS08380 8b0dad7d8bce0f6749e0ed3657a94f73 269 Gene3D G3DSA:3.30.420.10 102 257 1.5E-31 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS08380 8b0dad7d8bce0f6749e0ed3657a94f73 269 Pfam PF00665 Integrase core domain 107 220 1.6E-24 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RR42_RS05190 8b0dad7d8bce0f6749e0ed3657a94f73 269 PANTHER PTHR32552:SF23 55 263 3.1E-96 T 23-04-2016 RR42_RS05190 8b0dad7d8bce0f6749e0ed3657a94f73 269 PANTHER PTHR32552 55 263 3.1E-96 T 23-04-2016 RR42_RS05190 8b0dad7d8bce0f6749e0ed3657a94f73 269 SUPERFAMILY SSF53098 104 259 7.28E-35 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS05190 8b0dad7d8bce0f6749e0ed3657a94f73 269 Gene3D G3DSA:3.30.420.10 102 257 1.5E-31 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS05190 8b0dad7d8bce0f6749e0ed3657a94f73 269 Pfam PF00665 Integrase core domain 107 220 1.6E-24 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RR42_RS01200 8b0dad7d8bce0f6749e0ed3657a94f73 269 PANTHER PTHR32552:SF23 55 263 3.1E-96 T 23-04-2016 RR42_RS01200 8b0dad7d8bce0f6749e0ed3657a94f73 269 PANTHER PTHR32552 55 263 3.1E-96 T 23-04-2016 RR42_RS01200 8b0dad7d8bce0f6749e0ed3657a94f73 269 SUPERFAMILY SSF53098 104 259 7.28E-35 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS01200 8b0dad7d8bce0f6749e0ed3657a94f73 269 Gene3D G3DSA:3.30.420.10 102 257 1.5E-31 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS01200 8b0dad7d8bce0f6749e0ed3657a94f73 269 Pfam PF00665 Integrase core domain 107 220 1.6E-24 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RR42_RS16105 8b0dad7d8bce0f6749e0ed3657a94f73 269 PANTHER PTHR32552:SF23 55 263 3.1E-96 T 23-04-2016 RR42_RS16105 8b0dad7d8bce0f6749e0ed3657a94f73 269 PANTHER PTHR32552 55 263 3.1E-96 T 23-04-2016 RR42_RS16105 8b0dad7d8bce0f6749e0ed3657a94f73 269 SUPERFAMILY SSF53098 104 259 7.28E-35 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS16105 8b0dad7d8bce0f6749e0ed3657a94f73 269 Gene3D G3DSA:3.30.420.10 102 257 1.5E-31 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS16105 8b0dad7d8bce0f6749e0ed3657a94f73 269 Pfam PF00665 Integrase core domain 107 220 1.6E-24 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RR42_RS13635 62bf68d84e5d2f10e33a5355ac4fcef3 326 PIRSF PIRSF017082 1 326 2.0E-70 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS13635 62bf68d84e5d2f10e33a5355ac4fcef3 326 SUPERFAMILY SSF53850 112 291 1.97E-13 T 23-04-2016 RR42_RS13635 62bf68d84e5d2f10e33a5355ac4fcef3 326 PANTHER PTHR30349:SF1 3 288 2.7E-67 T 23-04-2016 RR42_RS13635 62bf68d84e5d2f10e33a5355ac4fcef3 326 PANTHER PTHR30349 3 288 2.7E-67 T 23-04-2016 RR42_RS13635 62bf68d84e5d2f10e33a5355ac4fcef3 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 322 3.1E-76 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS10265 0290727a1862109e40c5700d31511672 692 Gene3D G3DSA:3.90.226.10 2 278 7.9E-55 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS10265 0290727a1862109e40c5700d31511672 692 SUPERFAMILY SSF48179 599 690 1.19E-21 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RR42_RS10265 0290727a1862109e40c5700d31511672 692 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 193 1.2E-34 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RR42_RS10265 0290727a1862109e40c5700d31511672 692 SUPERFAMILY SSF51735 293 471 6.75E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10265 0290727a1862109e40c5700d31511672 692 PANTHER PTHR23309 1 690 2.5E-284 T 23-04-2016 RR42_RS10265 0290727a1862109e40c5700d31511672 692 Gene3D G3DSA:1.10.1040.10 611 690 3.3E-13 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RR42_RS10265 0290727a1862109e40c5700d31511672 692 Gene3D G3DSA:1.10.1040.10 478 569 1.3E-20 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RR42_RS10265 0290727a1862109e40c5700d31511672 692 SUPERFAMILY SSF52096 9 287 1.26E-60 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS10265 0290727a1862109e40c5700d31511672 692 PANTHER PTHR23309:SF9 1 690 2.5E-284 T 23-04-2016 RR42_RS10265 0290727a1862109e40c5700d31511672 692 SUPERFAMILY SSF48179 475 617 7.4E-27 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RR42_RS10265 0290727a1862109e40c5700d31511672 692 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 604 688 4.0E-7 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RR42_RS10265 0290727a1862109e40c5700d31511672 692 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 476 568 1.0E-24 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RR42_RS10265 0290727a1862109e40c5700d31511672 692 Gene3D G3DSA:3.40.50.720 290 477 1.1E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10265 0290727a1862109e40c5700d31511672 692 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 295 471 1.9E-61 T 23-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RR42_RS19005 17e106c0d2f4690b247a3995566d55d6 368 Pfam PF01761 3-dehydroquinate synthase 67 324 3.9E-107 T 23-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 RR42_RS19005 17e106c0d2f4690b247a3995566d55d6 368 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 357 42.74 T 23-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 RR42_RS19005 17e106c0d2f4690b247a3995566d55d6 368 Gene3D G3DSA:3.40.50.1970 3 172 4.2E-70 T 23-04-2016 RR42_RS19005 17e106c0d2f4690b247a3995566d55d6 368 PIRSF PIRSF001455 3 360 2.1E-110 T 23-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 RR42_RS19005 17e106c0d2f4690b247a3995566d55d6 368 PANTHER PTHR21090 1 355 2.5E-191 T 23-04-2016 RR42_RS19005 17e106c0d2f4690b247a3995566d55d6 368 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 350 7.6E-121 T 23-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 RR42_RS19005 17e106c0d2f4690b247a3995566d55d6 368 SUPERFAMILY SSF56796 4 354 7.07E-118 T 23-04-2016 RR42_RS19005 17e106c0d2f4690b247a3995566d55d6 368 Gene3D G3DSA:1.20.1090.10 173 355 4.1E-64 T 23-04-2016 RR42_RS16550 1de9bd93410634f0e29bab845f7570a3 733 PRINTS PR00458 Haem peroxidase superfamily signature 82 96 3.5E-16 T 23-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RR42_RS16550 1de9bd93410634f0e29bab845f7570a3 733 PRINTS PR00458 Haem peroxidase superfamily signature 142 159 3.5E-16 T 23-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RR42_RS16550 1de9bd93410634f0e29bab845f7570a3 733 PRINTS PR00458 Haem peroxidase superfamily signature 257 272 3.5E-16 T 23-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RR42_RS16550 1de9bd93410634f0e29bab845f7570a3 733 PRINTS PR00458 Haem peroxidase superfamily signature 316 331 3.5E-16 T 23-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RR42_RS16550 1de9bd93410634f0e29bab845f7570a3 733 Gene3D G3DSA:1.10.520.10 430 587 2.4E-62 T 23-04-2016 RR42_RS16550 1de9bd93410634f0e29bab845f7570a3 733 Gene3D G3DSA:1.10.520.10 710 731 2.4E-62 T 23-04-2016 RR42_RS16550 1de9bd93410634f0e29bab845f7570a3 733 Gene3D G3DSA:1.10.520.10 237 249 1.5E-72 T 23-04-2016 RR42_RS16550 1de9bd93410634f0e29bab845f7570a3 733 Gene3D G3DSA:1.10.520.10 39 193 1.5E-72 T 23-04-2016 RR42_RS16550 1de9bd93410634f0e29bab845f7570a3 733 PANTHER PTHR30555:SF0 1 732 0.0 T 23-04-2016 RR42_RS16550 1de9bd93410634f0e29bab845f7570a3 733 Pfam PF00141 Peroxidase 61 393 2.3E-46 T 23-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RR42_RS16550 1de9bd93410634f0e29bab845f7570a3 733 Pfam PF00141 Peroxidase 400 705 6.3E-38 T 23-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RR42_RS16550 1de9bd93410634f0e29bab845f7570a3 733 SUPERFAMILY SSF48113 14 427 6.93E-151 T 23-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 RR42_RS16550 1de9bd93410634f0e29bab845f7570a3 733 Gene3D G3DSA:1.10.420.10 308 405 3.5E-45 T 23-04-2016 RR42_RS16550 1de9bd93410634f0e29bab845f7570a3 733 Gene3D G3DSA:1.10.420.10 250 272 3.5E-45 T 23-04-2016 RR42_RS16550 1de9bd93410634f0e29bab845f7570a3 733 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 257 267 - T 23-04-2016 IPR019793 Peroxidases heam-ligand binding site RR42_RS16550 1de9bd93410634f0e29bab845f7570a3 733 PANTHER PTHR30555 1 732 0.0 T 23-04-2016 RR42_RS16550 1de9bd93410634f0e29bab845f7570a3 733 SUPERFAMILY SSF48113 428 731 9.28E-110 T 23-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 RR42_RS16550 1de9bd93410634f0e29bab845f7570a3 733 Gene3D G3DSA:1.10.420.10 588 707 1.4E-42 T 23-04-2016 RR42_RS16550 1de9bd93410634f0e29bab845f7570a3 733 ProSitePatterns PS00436 Peroxidases active site signature. 82 93 - T 23-04-2016 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 RR42_RS16550 1de9bd93410634f0e29bab845f7570a3 733 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 4 732 0.0 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RR42_RS16550 1de9bd93410634f0e29bab845f7570a3 733 Hamap MF_01961 Catalase-peroxidase [katG]. 1 732 41.797 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RR42_RS16550 1de9bd93410634f0e29bab845f7570a3 733 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 18 40 1.2E-56 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RR42_RS16550 1de9bd93410634f0e29bab845f7570a3 733 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 1.2E-56 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RR42_RS16550 1de9bd93410634f0e29bab845f7570a3 733 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 265 288 1.2E-56 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RR42_RS16550 1de9bd93410634f0e29bab845f7570a3 733 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 44 57 1.2E-56 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RR42_RS16550 1de9bd93410634f0e29bab845f7570a3 733 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 59 84 1.2E-56 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RR42_RS07335 d4e322e8dc21914ddd8d831abc347078 406 Pfam PF07690 Major Facilitator Superfamily 17 259 6.7E-27 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS07335 d4e322e8dc21914ddd8d831abc347078 406 Gene3D G3DSA:1.20.1250.20 7 193 4.0E-29 T 23-04-2016 RR42_RS07335 d4e322e8dc21914ddd8d831abc347078 406 PANTHER PTHR11360 6 398 2.2E-75 T 23-04-2016 RR42_RS07335 d4e322e8dc21914ddd8d831abc347078 406 Gene3D G3DSA:1.20.1250.20 223 402 2.7E-20 T 23-04-2016 RR42_RS07335 d4e322e8dc21914ddd8d831abc347078 406 SUPERFAMILY SSF103473 6 401 9.02E-56 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS17355 d9404eed85235a9974972496d8e0211f 242 PANTHER PTHR10146 4 234 2.7E-109 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 RR42_RS17355 d9404eed85235a9974972496d8e0211f 242 SUPERFAMILY SSF51419 3 226 1.96E-82 T 23-04-2016 IPR029066 PLP-binding barrel RR42_RS17355 d9404eed85235a9974972496d8e0211f 242 Gene3D G3DSA:3.20.20.10 2 230 5.2E-98 T 23-04-2016 IPR029066 PLP-binding barrel RR42_RS17355 d9404eed85235a9974972496d8e0211f 242 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 78 92 - T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 RR42_RS17355 d9404eed85235a9974972496d8e0211f 242 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 228 4.9E-80 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 RR42_RS17355 d9404eed85235a9974972496d8e0211f 242 PIRSF PIRSF004848 1 234 5.1E-76 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 RR42_RS17355 d9404eed85235a9974972496d8e0211f 242 Pfam PF01168 Alanine racemase, N-terminal domain 7 228 2.2E-33 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RR42_RS02085 05b5161e4daed3555763d3e38b4b2547 491 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 489 1.9E-145 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RR42_RS02085 05b5161e4daed3555763d3e38b4b2547 491 PRINTS PR00045 Sigma-54 factor signature 203 220 4.9E-30 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RR42_RS02085 05b5161e4daed3555763d3e38b4b2547 491 PRINTS PR00045 Sigma-54 factor signature 407 418 4.9E-30 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RR42_RS02085 05b5161e4daed3555763d3e38b4b2547 491 PRINTS PR00045 Sigma-54 factor signature 391 403 4.9E-30 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RR42_RS02085 05b5161e4daed3555763d3e38b4b2547 491 PRINTS PR00045 Sigma-54 factor signature 465 483 4.9E-30 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RR42_RS02085 05b5161e4daed3555763d3e38b4b2547 491 PANTHER PTHR32248 1 491 1.7E-152 T 23-04-2016 RR42_RS02085 05b5161e4daed3555763d3e38b4b2547 491 Pfam PF04963 Sigma-54 factor, core binding domain 128 318 1.6E-58 T 23-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 RR42_RS02085 05b5161e4daed3555763d3e38b4b2547 491 Pfam PF04552 Sigma-54, DNA binding domain 334 489 7.8E-68 T 23-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding RR42_RS02085 05b5161e4daed3555763d3e38b4b2547 491 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 379 398 - T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RR42_RS02085 05b5161e4daed3555763d3e38b4b2547 491 PIRSF PIRSF000774 1 491 5.3E-160 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RR42_RS02085 05b5161e4daed3555763d3e38b4b2547 491 PANTHER PTHR32248:SF4 1 491 1.7E-152 T 23-04-2016 RR42_RS02085 05b5161e4daed3555763d3e38b4b2547 491 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 470 477 - T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RR42_RS02085 05b5161e4daed3555763d3e38b4b2547 491 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 48 8.3E-17 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RR42_RS04255 1f71af60f63a3d0bf3398618a3ae9d5c 195 SMART SM00260 33 182 0.0011 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RR42_RS04255 1f71af60f63a3d0bf3398618a3ae9d5c 195 SUPERFAMILY SSF50341 36 187 9.81E-18 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RR42_RS04255 1f71af60f63a3d0bf3398618a3ae9d5c 195 Pfam PF01584 CheW-like domain 38 184 4.0E-14 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RR42_RS12810 dc4cd0d4bd51c263bb1c0341f079f38e 606 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site RR42_RS12810 dc4cd0d4bd51c263bb1c0341f079f38e 606 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 600 1.1E-282 T 23-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 RR42_RS12810 dc4cd0d4bd51c263bb1c0341f079f38e 606 Gene3D G3DSA:3.40.50.300 4 205 1.6E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12810 dc4cd0d4bd51c263bb1c0341f079f38e 606 SUPERFAMILY SSF54980 303 388 9.35E-13 T 23-04-2016 IPR009022 Elongation factor G, III-V domain RR42_RS12810 dc4cd0d4bd51c263bb1c0341f079f38e 606 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 5.2E-55 T 23-04-2016 RR42_RS12810 dc4cd0d4bd51c263bb1c0341f079f38e 606 Pfam PF00679 Elongation factor G C-terminus 398 477 4.7E-21 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain RR42_RS12810 dc4cd0d4bd51c263bb1c0341f079f38e 606 SUPERFAMILY SSF50447 182 302 6.18E-20 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RR42_RS12810 dc4cd0d4bd51c263bb1c0341f079f38e 606 SUPERFAMILY SSF54980 399 514 3.55E-27 T 23-04-2016 IPR009022 Elongation factor G, III-V domain RR42_RS12810 dc4cd0d4bd51c263bb1c0341f079f38e 606 Gene3D G3DSA:3.30.70.870 305 399 4.0E-38 T 23-04-2016 RR42_RS12810 dc4cd0d4bd51c263bb1c0341f079f38e 606 SUPERFAMILY SSF52540 4 219 3.33E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12810 dc4cd0d4bd51c263bb1c0341f079f38e 606 Pfam PF03144 Elongation factor Tu domain 2 219 290 8.4E-8 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RR42_RS12810 dc4cd0d4bd51c263bb1c0341f079f38e 606 PRINTS PR00315 GTP-binding elongation factor signature 87 98 5.5E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS12810 dc4cd0d4bd51c263bb1c0341f079f38e 606 PRINTS PR00315 GTP-binding elongation factor signature 123 132 5.5E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS12810 dc4cd0d4bd51c263bb1c0341f079f38e 606 PRINTS PR00315 GTP-binding elongation factor signature 7 20 5.5E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS12810 dc4cd0d4bd51c263bb1c0341f079f38e 606 PRINTS PR00315 GTP-binding elongation factor signature 51 59 5.5E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS12810 dc4cd0d4bd51c263bb1c0341f079f38e 606 PRINTS PR00315 GTP-binding elongation factor signature 71 81 5.5E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS12810 dc4cd0d4bd51c263bb1c0341f079f38e 606 Gene3D G3DSA:2.40.50.250 484 578 1.8E-41 T 23-04-2016 RR42_RS12810 dc4cd0d4bd51c263bb1c0341f079f38e 606 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 139 2.2E-23 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RR42_RS12810 dc4cd0d4bd51c263bb1c0341f079f38e 606 Gene3D G3DSA:3.30.70.240 400 478 8.3E-31 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain RR42_RS12810 dc4cd0d4bd51c263bb1c0341f079f38e 606 PANTHER PTHR23115 5 594 9.7E-274 T 23-04-2016 RR42_RS12810 dc4cd0d4bd51c263bb1c0341f079f38e 606 PANTHER PTHR23115:SF14 5 594 9.7E-274 T 23-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 RR42_RS12810 dc4cd0d4bd51c263bb1c0341f079f38e 606 Gene3D G3DSA:2.40.30.10 206 304 6.8E-21 T 23-04-2016 RR42_RS11800 68bdabcce7baa22aead03665f519d8f4 260 SUPERFAMILY SSF55315 2 103 1.39E-12 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like RR42_RS11800 68bdabcce7baa22aead03665f519d8f4 260 Pfam PF00588 SpoU rRNA Methylase family 116 251 2.7E-31 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RR42_RS11800 68bdabcce7baa22aead03665f519d8f4 260 Gene3D G3DSA:3.40.1280.10 115 258 5.4E-43 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RR42_RS11800 68bdabcce7baa22aead03665f519d8f4 260 SUPERFAMILY SSF75217 113 258 9.16E-39 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases RR42_RS11800 68bdabcce7baa22aead03665f519d8f4 260 Gene3D G3DSA:3.30.1330.30 3 102 1.0E-10 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like RR42_RS11800 68bdabcce7baa22aead03665f519d8f4 260 PANTHER PTHR12029 25 258 1.3E-37 T 23-04-2016 RR42_RS12165 7163b5981adbe5f5db1306447c1de735 255 SUPERFAMILY SSF49584 181 248 9.42E-14 T 23-04-2016 IPR016148 Pili assembly chaperone, C-terminal RR42_RS12165 7163b5981adbe5f5db1306447c1de735 255 PRINTS PR00969 Pili chaperone signature 131 146 2.7E-22 T 23-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RR42_RS12165 7163b5981adbe5f5db1306447c1de735 255 PRINTS PR00969 Pili chaperone signature 79 100 2.7E-22 T 23-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RR42_RS12165 7163b5981adbe5f5db1306447c1de735 255 PRINTS PR00969 Pili chaperone signature 30 39 2.7E-22 T 23-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RR42_RS12165 7163b5981adbe5f5db1306447c1de735 255 PRINTS PR00969 Pili chaperone signature 107 124 2.7E-22 T 23-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RR42_RS12165 7163b5981adbe5f5db1306447c1de735 255 Gene3D G3DSA:2.60.40.360 29 149 2.4E-40 T 23-04-2016 IPR008962 PapD-like RR42_RS12165 7163b5981adbe5f5db1306447c1de735 255 PANTHER PTHR30251 1 163 5.5E-87 T 23-04-2016 RR42_RS12165 7163b5981adbe5f5db1306447c1de735 255 PANTHER PTHR30251 181 255 5.5E-87 T 23-04-2016 RR42_RS12165 7163b5981adbe5f5db1306447c1de735 255 PANTHER PTHR30251:SF2 1 163 5.5E-87 T 23-04-2016 RR42_RS12165 7163b5981adbe5f5db1306447c1de735 255 PANTHER PTHR30251:SF2 181 255 5.5E-87 T 23-04-2016 RR42_RS12165 7163b5981adbe5f5db1306447c1de735 255 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 183 246 5.9E-17 T 23-04-2016 IPR016148 Pili assembly chaperone, C-terminal RR42_RS12165 7163b5981adbe5f5db1306447c1de735 255 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 30 149 3.0E-40 T 23-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 RR42_RS12165 7163b5981adbe5f5db1306447c1de735 255 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 106 123 - T 23-04-2016 IPR018046 Pili assembly chaperone, conserved site RR42_RS12165 7163b5981adbe5f5db1306447c1de735 255 SUPERFAMILY SSF49354 24 148 6.8E-38 T 23-04-2016 IPR008962 PapD-like RR42_RS12165 7163b5981adbe5f5db1306447c1de735 255 Gene3D G3DSA:2.60.40.1070 151 251 9.5E-18 T 23-04-2016 IPR016148 Pili assembly chaperone, C-terminal RR42_RS18640 ab633f4378a847ee19f840ec841014ab 182 PANTHER PTHR38436 53 180 2.3E-30 T 23-04-2016 RR42_RS18640 ab633f4378a847ee19f840ec841014ab 182 Gene3D G3DSA:3.10.450.50 56 180 1.3E-32 T 23-04-2016 IPR032710 NTF2-like domain RR42_RS18640 ab633f4378a847ee19f840ec841014ab 182 Pfam PF07366 SnoaL-like polyketide cyclase 55 178 3.6E-38 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain RR42_RS18640 ab633f4378a847ee19f840ec841014ab 182 SUPERFAMILY SSF54427 56 180 4.97E-30 T 23-04-2016 IPR032710 NTF2-like domain RR42_RS12665 cb7a12c613142ff5931e503b9639a2bb 337 Gene3D G3DSA:3.20.20.70 5 250 1.2E-76 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS12665 cb7a12c613142ff5931e503b9639a2bb 337 Pfam PF01207 Dihydrouridine synthase (Dus) 10 314 9.1E-83 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RR42_RS12665 cb7a12c613142ff5931e503b9639a2bb 337 PIRSF PIRSF006621 1 325 6.6E-76 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RR42_RS12665 cb7a12c613142ff5931e503b9639a2bb 337 SUPERFAMILY SSF51395 7 310 9.16E-74 T 23-04-2016 RR42_RS12665 cb7a12c613142ff5931e503b9639a2bb 337 PANTHER PTHR11082 1 322 9.2E-146 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RR42_RS12665 cb7a12c613142ff5931e503b9639a2bb 337 PANTHER PTHR11082:SF29 1 322 9.2E-146 T 23-04-2016 RR42_RS12665 cb7a12c613142ff5931e503b9639a2bb 337 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 6 306 2.6E-136 T 23-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 RR42_RS12665 cb7a12c613142ff5931e503b9639a2bb 337 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 328 49.519 T 23-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 RR42_RS12665 cb7a12c613142ff5931e503b9639a2bb 337 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 89 107 - T 23-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 RR42_RS13665 cce116168045ca26a1ad066407b45fd2 268 SUPERFAMILY SSF51735 1 154 2.1E-19 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS13665 cce116168045ca26a1ad066407b45fd2 268 Gene3D G3DSA:3.30.360.10 125 238 1.6E-37 T 23-04-2016 RR42_RS13665 cce116168045ca26a1ad066407b45fd2 268 SUPERFAMILY SSF55347 125 238 1.63E-32 T 23-04-2016 RR42_RS13665 cce116168045ca26a1ad066407b45fd2 268 Hamap MF_01265 Probable L-aspartate dehydrogenase [nadX]. 1 268 36.864 T 23-04-2016 IPR020626 L-aspartate dehydrogenase, prokaryotic GO:0009435|GO:0033735|GO:0055114 KEGG: 00760+1.4.1.21|UniPathway: UPA00253 RR42_RS13665 cce116168045ca26a1ad066407b45fd2 268 Pfam PF01958 Domain of unknown function DUF108 169 256 4.0E-33 T 23-04-2016 IPR002811 Aspartate dehydrogenase GO:0006742|GO:0016491|GO:0019363|GO:0055114 KEGG: 00760+1.4.1.21|UniPathway: UPA00253 RR42_RS13665 cce116168045ca26a1ad066407b45fd2 268 Gene3D G3DSA:3.40.50.720 2 118 4.6E-10 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS13665 cce116168045ca26a1ad066407b45fd2 268 PANTHER PTHR31873 1 266 1.8E-72 T 23-04-2016 RR42_RS13665 cce116168045ca26a1ad066407b45fd2 268 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 8 120 1.7E-24 T 23-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 RR42_RS13665 cce116168045ca26a1ad066407b45fd2 268 PIRSF PIRSF005227 1 268 1.5E-85 T 23-04-2016 IPR011182 L-aspartate dehydrogenase GO:0009435|GO:0033735|GO:0055114 KEGG: 00760+1.4.1.21|UniPathway: UPA00253 RR42_RS31340 e8d41705942ceac2be35a461e4f67e21 313 Pfam PF13714 Phosphoenolpyruvate phosphomutase 63 307 2.9E-49 T 23-04-2016 RR42_RS31340 e8d41705942ceac2be35a461e4f67e21 313 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 60 313 1.8E-115 T 23-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 RR42_RS31340 e8d41705942ceac2be35a461e4f67e21 313 SUPERFAMILY SSF51621 52 313 2.6E-95 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS31340 e8d41705942ceac2be35a461e4f67e21 313 PANTHER PTHR21631 46 313 2.2E-140 T 23-04-2016 RR42_RS31340 e8d41705942ceac2be35a461e4f67e21 313 Gene3D G3DSA:3.20.20.60 58 313 1.2E-92 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS31340 e8d41705942ceac2be35a461e4f67e21 313 PANTHER PTHR21631:SF4 46 313 2.2E-140 T 23-04-2016 RR42_RS31340 e8d41705942ceac2be35a461e4f67e21 313 ProSitePatterns PS00161 Isocitrate lyase signature. 174 179 - T 23-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 RR42_RS18175 9a33e63048184f2ef336a22a6b4e63f6 397 PIRSF PIRSF029285 2 357 2.7E-141 T 23-04-2016 IPR014553 Predicted aminopeptidase RR42_RS18175 9a33e63048184f2ef336a22a6b4e63f6 397 Pfam PF10023 Putative aminopeptidase 28 350 3.9E-130 T 23-04-2016 IPR014553 Predicted aminopeptidase RR42_RS10810 0df0fc9bc35bbf96ac3db1f71717383b 310 PANTHER PTHR30465 15 310 4.6E-104 T 23-04-2016 RR42_RS10810 0df0fc9bc35bbf96ac3db1f71717383b 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 125 309 2.7E-35 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS10810 0df0fc9bc35bbf96ac3db1f71717383b 310 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 22 68 5.3E-11 T 23-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RR42_RS10810 0df0fc9bc35bbf96ac3db1f71717383b 310 SUPERFAMILY SSF161098 102 292 3.14E-31 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS10810 0df0fc9bc35bbf96ac3db1f71717383b 310 PANTHER PTHR30465:SF2 15 310 4.6E-104 T 23-04-2016 RR42_RS10810 0df0fc9bc35bbf96ac3db1f71717383b 310 Gene3D G3DSA:1.10.3720.10 98 306 8.5E-33 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS06475 7e9771a35dac3a4b45c44b826366b4da 632 SUPERFAMILY SSF69593 414 613 2.62E-32 T 23-04-2016 RR42_RS06475 7e9771a35dac3a4b45c44b826366b4da 632 SMART SM00563 461 577 5.8E-34 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RR42_RS06475 7e9771a35dac3a4b45c44b826366b4da 632 Gene3D G3DSA:1.20.1250.20 231 430 5.0E-12 T 23-04-2016 RR42_RS06475 7e9771a35dac3a4b45c44b826366b4da 632 Gene3D G3DSA:3.40.1130.10 441 574 8.6E-18 T 23-04-2016 RR42_RS06475 7e9771a35dac3a4b45c44b826366b4da 632 SUPERFAMILY SSF103473 6 430 1.03E-33 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS06475 7e9771a35dac3a4b45c44b826366b4da 632 PANTHER PTHR10434 351 632 3.2E-125 T 23-04-2016 RR42_RS06475 7e9771a35dac3a4b45c44b826366b4da 632 PANTHER PTHR10434:SF15 351 632 3.2E-125 T 23-04-2016 RR42_RS06475 7e9771a35dac3a4b45c44b826366b4da 632 Pfam PF01553 Acyltransferase 450 574 1.5E-26 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RR42_RS06475 7e9771a35dac3a4b45c44b826366b4da 632 Gene3D G3DSA:1.20.1250.20 19 198 2.5E-10 T 23-04-2016 RR42_RS06475 7e9771a35dac3a4b45c44b826366b4da 632 Pfam PF07690 Major Facilitator Superfamily 19 386 2.5E-20 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS05925 6749657ac02b80d5fc88045959fed1cd 371 Pfam PF00762 Ferrochelatase 16 343 1.1E-110 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RR42_RS05925 6749657ac02b80d5fc88045959fed1cd 371 TIGRFAM TIGR00109 hemH: ferrochelatase 14 344 2.3E-89 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RR42_RS05925 6749657ac02b80d5fc88045959fed1cd 371 Gene3D G3DSA:3.40.50.1400 15 224 2.4E-68 T 23-04-2016 RR42_RS05925 6749657ac02b80d5fc88045959fed1cd 371 SUPERFAMILY SSF53800 15 351 4.09E-104 T 23-04-2016 RR42_RS05925 6749657ac02b80d5fc88045959fed1cd 371 Gene3D G3DSA:3.40.50.1400 225 344 1.0E-29 T 23-04-2016 RR42_RS05925 6749657ac02b80d5fc88045959fed1cd 371 ProSitePatterns PS00534 Ferrochelatase signature. 213 231 - T 23-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RR42_RS05925 6749657ac02b80d5fc88045959fed1cd 371 PANTHER PTHR11108 13 345 2.2E-110 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RR42_RS05925 6749657ac02b80d5fc88045959fed1cd 371 Hamap MF_00323 Ferrochelatase [hemH]. 15 344 37.689 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RR42_RS16785 8a01205b055ca127ba447fbc096cc0bc 438 Pfam PF01566 Natural resistance-associated macrophage protein 43 409 1.4E-112 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RR42_RS16785 8a01205b055ca127ba447fbc096cc0bc 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 130 149 1.1E-53 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RR42_RS16785 8a01205b055ca127ba447fbc096cc0bc 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 380 399 1.1E-53 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RR42_RS16785 8a01205b055ca127ba447fbc096cc0bc 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 207 230 1.1E-53 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RR42_RS16785 8a01205b055ca127ba447fbc096cc0bc 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 320 339 1.1E-53 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RR42_RS16785 8a01205b055ca127ba447fbc096cc0bc 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 348 365 1.1E-53 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RR42_RS16785 8a01205b055ca127ba447fbc096cc0bc 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 102 128 1.1E-53 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RR42_RS16785 8a01205b055ca127ba447fbc096cc0bc 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 155 176 1.1E-53 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RR42_RS16785 8a01205b055ca127ba447fbc096cc0bc 438 PANTHER PTHR11706:SF33 24 436 7.4E-148 T 23-04-2016 RR42_RS16785 8a01205b055ca127ba447fbc096cc0bc 438 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 24 404 1.7E-98 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RR42_RS16785 8a01205b055ca127ba447fbc096cc0bc 438 PANTHER PTHR11706 24 436 7.4E-148 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RR42_RS10370 1421dd8cc1b931cb4d1b29d71e096c3a 246 SMART SM00382 30 223 1.8E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS10370 1421dd8cc1b931cb4d1b29d71e096c3a 246 Gene3D G3DSA:3.40.50.300 4 242 1.1E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS10370 1421dd8cc1b931cb4d1b29d71e096c3a 246 PANTHER PTHR24220 7 246 2.3E-75 T 23-04-2016 RR42_RS10370 1421dd8cc1b931cb4d1b29d71e096c3a 246 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS10370 1421dd8cc1b931cb4d1b29d71e096c3a 246 PANTHER PTHR24220:SF358 7 246 2.3E-75 T 23-04-2016 RR42_RS10370 1421dd8cc1b931cb4d1b29d71e096c3a 246 SUPERFAMILY SSF52540 5 244 9.09E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS10370 1421dd8cc1b931cb4d1b29d71e096c3a 246 Pfam PF00005 ABC transporter 22 175 1.1E-26 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS07755 2c91cce22517aa73a53c86afb9e1538a 735 Gene3D G3DSA:2.40.30.10 526 586 6.3E-10 T 23-04-2016 RR42_RS07755 2c91cce22517aa73a53c86afb9e1538a 735 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 547 554 1.8E-10 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS07755 2c91cce22517aa73a53c86afb9e1538a 735 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 605 624 1.8E-10 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS07755 2c91cce22517aa73a53c86afb9e1538a 735 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 530 540 1.8E-10 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS07755 2c91cce22517aa73a53c86afb9e1538a 735 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 640 651 1.8E-10 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS07755 2c91cce22517aa73a53c86afb9e1538a 735 SUPERFAMILY SSF52218 330 479 6.9E-35 T 23-04-2016 IPR029039 Flavoprotein-like domain RR42_RS07755 2c91cce22517aa73a53c86afb9e1538a 735 PANTHER PTHR19384 546 735 9.9E-50 T 23-04-2016 RR42_RS07755 2c91cce22517aa73a53c86afb9e1538a 735 Pfam PF03929 PepSY-associated TM region 3 316 2.9E-34 T 23-04-2016 IPR005625 PepSY-associated TM protein RR42_RS07755 2c91cce22517aa73a53c86afb9e1538a 735 PANTHER PTHR19384:SF76 546 735 9.9E-50 T 23-04-2016 RR42_RS07755 2c91cce22517aa73a53c86afb9e1538a 735 Gene3D G3DSA:3.40.50.360 322 472 6.3E-29 T 23-04-2016 IPR029039 Flavoprotein-like domain RR42_RS07755 2c91cce22517aa73a53c86afb9e1538a 735 SUPERFAMILY SSF52343 598 735 8.12E-32 T 23-04-2016 RR42_RS07755 2c91cce22517aa73a53c86afb9e1538a 735 Pfam PF00258 Flavodoxin 337 463 4.5E-14 T 23-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 RR42_RS07755 2c91cce22517aa73a53c86afb9e1538a 735 SUPERFAMILY SSF63380 520 597 2.94E-16 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RR42_RS07755 2c91cce22517aa73a53c86afb9e1538a 735 Pfam PF00175 Oxidoreductase NAD-binding domain 606 707 1.3E-14 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RR42_RS07755 2c91cce22517aa73a53c86afb9e1538a 735 Gene3D G3DSA:3.40.50.80 600 735 3.2E-34 T 23-04-2016 RR42_RS14080 f412a70329762be2324029fa187b966e 199 SUPERFAMILY SSF88946 3 110 2.35E-33 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14080 f412a70329762be2324029fa187b966e 199 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 191 1.1E-97 T 23-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14080 f412a70329762be2324029fa187b966e 199 PANTHER PTHR30173 1 195 1.4E-52 T 23-04-2016 RR42_RS14080 f412a70329762be2324029fa187b966e 199 Gene3D G3DSA:1.10.10.10 127 189 4.2E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS14080 f412a70329762be2324029fa187b966e 199 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 187 1.4E-34 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14080 f412a70329762be2324029fa187b966e 199 SUPERFAMILY SSF88659 124 187 7.1E-19 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14080 f412a70329762be2324029fa187b966e 199 PANTHER PTHR30173:SF1 1 195 1.4E-52 T 23-04-2016 RR42_RS14080 f412a70329762be2324029fa187b966e 199 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 23-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14080 f412a70329762be2324029fa187b966e 199 Pfam PF04542 Sigma-70 region 2 25 92 2.4E-19 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14080 f412a70329762be2324029fa187b966e 199 Gene3D G3DSA:1.10.1740.10 3 113 9.8E-39 T 23-04-2016 RR42_RS14080 f412a70329762be2324029fa187b966e 199 Pfam PF08281 Sigma-70, region 4 133 182 3.5E-19 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14560 2b2f3b43a9fa192d859fd29e0c568942 473 Pfam PF00155 Aminotransferase class I and II 150 463 5.9E-33 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RR42_RS14560 2b2f3b43a9fa192d859fd29e0c568942 473 SUPERFAMILY SSF46785 15 86 8.17E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS14560 2b2f3b43a9fa192d859fd29e0c568942 473 PANTHER PTHR11751 92 468 3.2E-98 T 23-04-2016 RR42_RS14560 2b2f3b43a9fa192d859fd29e0c568942 473 SUPERFAMILY SSF53383 121 468 1.77E-79 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS14560 2b2f3b43a9fa192d859fd29e0c568942 473 Gene3D G3DSA:1.10.10.10 14 84 4.5E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS14560 2b2f3b43a9fa192d859fd29e0c568942 473 Gene3D G3DSA:3.40.640.10 148 369 2.9E-66 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS14560 2b2f3b43a9fa192d859fd29e0c568942 473 SMART SM00345 23 82 3.1E-14 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS14560 2b2f3b43a9fa192d859fd29e0c568942 473 PANTHER PTHR11751:SF386 92 468 3.2E-98 T 23-04-2016 RR42_RS14560 2b2f3b43a9fa192d859fd29e0c568942 473 Pfam PF00392 Bacterial regulatory proteins, gntR family 28 82 8.5E-14 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS14560 2b2f3b43a9fa192d859fd29e0c568942 473 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 5.4E-5 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS14560 2b2f3b43a9fa192d859fd29e0c568942 473 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 5.4E-5 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS12490 1e9e642f53866e48c69a070a94a4a521 264 PANTHER PTHR24220:SF491 8 252 1.3E-107 T 23-04-2016 RR42_RS12490 1e9e642f53866e48c69a070a94a4a521 264 SMART SM00382 31 227 9.5E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS12490 1e9e642f53866e48c69a070a94a4a521 264 SUPERFAMILY SSF52540 5 248 5.67E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12490 1e9e642f53866e48c69a070a94a4a521 264 PANTHER PTHR24220 8 252 1.3E-107 T 23-04-2016 RR42_RS12490 1e9e642f53866e48c69a070a94a4a521 264 Gene3D G3DSA:3.40.50.300 5 248 2.6E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12490 1e9e642f53866e48c69a070a94a4a521 264 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 249 2.4E-5 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RR42_RS12490 1e9e642f53866e48c69a070a94a4a521 264 Pfam PF00005 ABC transporter 23 178 5.1E-25 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS08795 c3d0c49944bf924c2a1c85f2d86164c6 192 Gene3D G3DSA:3.40.50.300 2 162 2.0E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS08795 c3d0c49944bf924c2a1c85f2d86164c6 192 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 5 161 2.3E-41 T 23-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 RR42_RS08795 c3d0c49944bf924c2a1c85f2d86164c6 192 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 5 137 9.9E-44 T 23-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 RR42_RS08795 c3d0c49944bf924c2a1c85f2d86164c6 192 PANTHER PTHR40072 4 142 3.1E-14 T 23-04-2016 RR42_RS08795 c3d0c49944bf924c2a1c85f2d86164c6 192 SUPERFAMILY SSF52540 3 163 2.22E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11655 fd16d89c3f4393fbe733af0e95da362d 140 PANTHER PTHR11527 37 140 1.6E-25 T 23-04-2016 IPR031107 Small heat shock protein HSP20 RR42_RS11655 fd16d89c3f4393fbe733af0e95da362d 140 SUPERFAMILY SSF49764 23 139 2.83E-35 T 23-04-2016 IPR008978 HSP20-like chaperone RR42_RS11655 fd16d89c3f4393fbe733af0e95da362d 140 Gene3D G3DSA:2.60.40.790 23 139 5.9E-35 T 23-04-2016 IPR008978 HSP20-like chaperone RR42_RS11655 fd16d89c3f4393fbe733af0e95da362d 140 PANTHER PTHR11527:SF119 37 140 1.6E-25 T 23-04-2016 RR42_RS11655 fd16d89c3f4393fbe733af0e95da362d 140 Pfam PF00011 Hsp20/alpha crystallin family 39 137 2.7E-19 T 23-04-2016 IPR002068 Alpha crystallin/Hsp20 domain RR42_RS17265 8dbb58f634e93edc898617a628117965 630 PANTHER PTHR11236 142 495 4.0E-117 T 23-04-2016 RR42_RS17265 8dbb58f634e93edc898617a628117965 630 Gene3D G3DSA:3.60.120.10 102 412 2.3E-114 T 23-04-2016 IPR005801 ADC synthase GO:0009058 RR42_RS17265 8dbb58f634e93edc898617a628117965 630 Gene3D G3DSA:3.30.470.10 418 487 5.0E-10 T 23-04-2016 RR42_RS17265 8dbb58f634e93edc898617a628117965 630 PRINTS PR00095 Anthranilate synthase component I signature 334 348 2.2E-9 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RR42_RS17265 8dbb58f634e93edc898617a628117965 630 PRINTS PR00095 Anthranilate synthase component I signature 254 267 2.2E-9 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RR42_RS17265 8dbb58f634e93edc898617a628117965 630 PRINTS PR00095 Anthranilate synthase component I signature 240 253 2.2E-9 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RR42_RS17265 8dbb58f634e93edc898617a628117965 630 Pfam PF01063 Amino-transferase class IV 420 622 1.2E-39 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RR42_RS17265 8dbb58f634e93edc898617a628117965 630 Pfam PF00425 chorismate binding enzyme 139 406 1.6E-79 T 23-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal RR42_RS17265 8dbb58f634e93edc898617a628117965 630 PANTHER PTHR11236:SF18 142 495 4.0E-117 T 23-04-2016 RR42_RS17265 8dbb58f634e93edc898617a628117965 630 SUPERFAMILY SSF56752 360 622 1.83E-51 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RR42_RS17265 8dbb58f634e93edc898617a628117965 630 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 94 411 3.2E-99 T 23-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 RR42_RS17265 8dbb58f634e93edc898617a628117965 630 SUPERFAMILY SSF56322 101 412 6.67E-97 T 23-04-2016 IPR005801 ADC synthase GO:0009058 RR42_RS17265 8dbb58f634e93edc898617a628117965 630 Gene3D G3DSA:3.20.10.10 498 622 3.0E-26 T 23-04-2016 RR42_RS31955 8f0e4760973d55825a7144e581e87784 296 PANTHER PTHR35560 4 293 3.1E-56 T 23-04-2016 RR42_RS31955 8f0e4760973d55825a7144e581e87784 296 Gene3D G3DSA:3.40.50.1820 9 288 1.8E-42 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS31955 8f0e4760973d55825a7144e581e87784 296 SUPERFAMILY SSF53474 13 225 6.12E-8 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 ProSitePatterns PS00211 ABC transporters family signature. 1819 1833 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 ProSitePatterns PS00211 ABC transporters family signature. 1433 1447 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 ProSitePatterns PS00211 ABC transporters family signature. 862 876 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 Gene3D G3DSA:1.20.1580.10 1108 1143 2.0E-45 T 23-04-2016 RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 Gene3D G3DSA:1.20.1580.10 397 414 5.2E-41 T 23-04-2016 RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 Gene3D G3DSA:1.20.1580.10 1277 1310 2.0E-45 T 23-04-2016 RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 Gene3D G3DSA:1.20.1580.10 446 499 5.2E-41 T 23-04-2016 RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 Gene3D G3DSA:1.20.1580.10 94 120 5.2E-41 T 23-04-2016 RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 Gene3D G3DSA:1.20.1580.10 1352 1423 2.0E-45 T 23-04-2016 RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 Gene3D G3DSA:1.20.1580.10 252 285 5.2E-41 T 23-04-2016 RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 SUPERFAMILY SSF52540 1567 1615 6.3E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 Gene3D G3DSA:3.40.50.300 1563 1626 2.0E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 Gene3D G3DSA:3.40.50.300 2 38 2.5E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 Gene3D G3DSA:3.40.50.300 500 616 2.5E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 Gene3D G3DSA:3.40.50.300 1424 1544 1.1E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 Gene3D G3DSA:3.40.50.300 631 715 4.7E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 Gene3D G3DSA:3.40.50.300 1810 1935 2.0E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 Gene3D G3DSA:3.40.50.300 1009 1072 1.1E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 Gene3D G3DSA:3.40.50.300 853 982 4.7E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 SUPERFAMILY SSF52540 1376 1515 7.84E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 6 967 6.0E-274 T 23-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 SUPERFAMILY SSF52540 1668 1912 6.3E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 Gene3D G3DSA:3.30.1490.20 189 237 3.6E-4 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 SUPERFAMILY SSF52540 642 956 2.84E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 SUPERFAMILY SSF52540 6 154 8.79E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 SUPERFAMILY SSF52540 454 591 8.79E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 PANTHER PTHR32282:SF2 1437 1614 0.0 T 23-04-2016 RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 PANTHER PTHR32282:SF2 446 519 0.0 T 23-04-2016 RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 PANTHER PTHR32282:SF2 2 414 0.0 T 23-04-2016 RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 PANTHER PTHR32282:SF2 1664 1963 0.0 T 23-04-2016 RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 SUPERFAMILY SSF52540 1019 1218 7.84E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 Gene3D G3DSA:3.40.50.300 39 72 2.1E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 Gene3D G3DSA:3.40.50.300 121 154 2.1E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 Gene3D G3DSA:1.20.1580.10 717 852 1.5E-39 T 23-04-2016 RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 Gene3D G3DSA:1.20.1580.10 1683 1809 2.5E-50 T 23-04-2016 RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 PANTHER PTHR32282 1437 1614 0.0 T 23-04-2016 RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 PANTHER PTHR32282 446 519 0.0 T 23-04-2016 RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 PANTHER PTHR32282 2 414 0.0 T 23-04-2016 RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 PANTHER PTHR32282 1664 1963 0.0 T 23-04-2016 RR42_RS02265 ade006a2709ce5d8a59ac813fe8598c7 1963 Gene3D G3DSA:1.10.8.280 287 396 6.0E-18 T 23-04-2016 RR42_RS15400 e8813f400867441c2f21d785eca50617 397 Gene3D G3DSA:2.40.110.10 135 231 1.4E-30 T 23-04-2016 RR42_RS15400 e8813f400867441c2f21d785eca50617 397 SUPERFAMILY SSF56645 7 243 1.44E-76 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RR42_RS15400 e8813f400867441c2f21d785eca50617 397 PANTHER PTHR10909 1 396 3.2E-273 T 23-04-2016 RR42_RS15400 e8813f400867441c2f21d785eca50617 397 Gene3D G3DSA:1.20.140.10 232 392 7.6E-42 T 23-04-2016 RR42_RS15400 e8813f400867441c2f21d785eca50617 397 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 349 368 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RR42_RS15400 e8813f400867441c2f21d785eca50617 397 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 244 389 6.2E-26 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS15400 e8813f400867441c2f21d785eca50617 397 PANTHER PTHR10909:SF307 1 396 3.2E-273 T 23-04-2016 RR42_RS15400 e8813f400867441c2f21d785eca50617 397 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 136 231 3.4E-20 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RR42_RS15400 e8813f400867441c2f21d785eca50617 397 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 21 132 2.3E-33 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS15400 e8813f400867441c2f21d785eca50617 397 Gene3D G3DSA:1.10.540.10 5 134 5.7E-43 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS15400 e8813f400867441c2f21d785eca50617 397 SUPERFAMILY SSF47203 246 394 2.09E-41 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS13260 67c3d504fe8dd224860c37e07898477b 398 PANTHER PTHR24023:SF593 49 384 4.0E-37 T 23-04-2016 RR42_RS13260 67c3d504fe8dd224860c37e07898477b 398 SUPERFAMILY SSF89796 4 397 2.35E-131 T 23-04-2016 IPR023606 CoA-transferase family III domain RR42_RS13260 67c3d504fe8dd224860c37e07898477b 398 Gene3D G3DSA:3.30.1540.10 224 306 4.5E-26 T 23-04-2016 RR42_RS13260 67c3d504fe8dd224860c37e07898477b 398 Gene3D G3DSA:3.40.50.10540 3 217 9.1E-112 T 23-04-2016 IPR023606 CoA-transferase family III domain RR42_RS13260 67c3d504fe8dd224860c37e07898477b 398 Gene3D G3DSA:3.40.50.10540 307 397 9.1E-112 T 23-04-2016 IPR023606 CoA-transferase family III domain RR42_RS13260 67c3d504fe8dd224860c37e07898477b 398 Pfam PF02515 CoA-transferase family III 6 374 1.6E-126 T 23-04-2016 IPR003673 CoA-transferase family III GO:0003824 RR42_RS13260 67c3d504fe8dd224860c37e07898477b 398 PANTHER PTHR24023 49 384 4.0E-37 T 23-04-2016 RR42_RS17915 cf62ee2030ad8ebf929003c81906a60c 316 SMART SM00702 125 309 6.5E-47 T 23-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 RR42_RS17915 cf62ee2030ad8ebf929003c81906a60c 316 PANTHER PTHR10869 124 314 1.0E-73 T 23-04-2016 RR42_RS17915 cf62ee2030ad8ebf929003c81906a60c 316 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 205 309 1.8E-16 T 23-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 RR42_RS11195 bff7fb7fcdbcfcb18f2eeb99f7e03830 403 Gene3D G3DSA:1.10.3210.10 152 319 5.2E-21 T 23-04-2016 IPR006674 HD domain RR42_RS11195 bff7fb7fcdbcfcb18f2eeb99f7e03830 403 Pfam PF11871 Domain of unknown function (DUF3391) 2 129 1.1E-28 T 23-04-2016 IPR021812 Protein of unknown function DUF3391 RR42_RS11195 bff7fb7fcdbcfcb18f2eeb99f7e03830 403 SMART SM00471 157 293 1.0E-5 T 23-04-2016 IPR003607 HD/PDEase domain RR42_RS11195 bff7fb7fcdbcfcb18f2eeb99f7e03830 403 SUPERFAMILY SSF109604 154 322 1.78E-31 T 23-04-2016 RR42_RS11195 bff7fb7fcdbcfcb18f2eeb99f7e03830 403 Pfam PF13487 HD domain 212 274 2.8E-13 T 23-04-2016 RR42_RS10545 b0f8713d5f1d2a4202350cb4d0fb40ce 328 Pfam PF00107 Zinc-binding dehydrogenase 161 272 2.8E-11 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RR42_RS10545 b0f8713d5f1d2a4202350cb4d0fb40ce 328 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 5 326 4.4E-129 T 23-04-2016 IPR014188 Acrylyl-CoA reductase AcuI RR42_RS10545 b0f8713d5f1d2a4202350cb4d0fb40ce 328 Gene3D G3DSA:3.40.50.720 127 293 9.5E-73 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10545 b0f8713d5f1d2a4202350cb4d0fb40ce 328 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 90 7.2E-7 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RR42_RS10545 b0f8713d5f1d2a4202350cb4d0fb40ce 328 PANTHER PTHR11695 17 327 1.8E-139 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RR42_RS10545 b0f8713d5f1d2a4202350cb4d0fb40ce 328 PANTHER PTHR11695:SF13 17 327 1.8E-139 T 23-04-2016 IPR014188 Acrylyl-CoA reductase AcuI RR42_RS10545 b0f8713d5f1d2a4202350cb4d0fb40ce 328 SMART SM00829 12 324 3.3E-6 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RR42_RS10545 b0f8713d5f1d2a4202350cb4d0fb40ce 328 SUPERFAMILY SSF51735 119 289 1.05E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10545 b0f8713d5f1d2a4202350cb4d0fb40ce 328 Gene3D G3DSA:3.90.180.10 1 88 8.5E-10 T 23-04-2016 IPR011032 GroES-like RR42_RS10545 b0f8713d5f1d2a4202350cb4d0fb40ce 328 SUPERFAMILY SSF50129 3 146 2.04E-42 T 23-04-2016 IPR011032 GroES-like RR42_RS07310 3a9d4a52ac6f559a38c173c19e44fa57 87 Gene3D G3DSA:3.30.160.140 1 73 7.5E-16 T 23-04-2016 IPR009962 Protein of unknown function DUF1488 RR42_RS07310 3a9d4a52ac6f559a38c173c19e44fa57 87 Pfam PF07369 Protein of unknown function (DUF1488) 3 76 1.7E-18 T 23-04-2016 IPR009962 Protein of unknown function DUF1488 RR42_RS07310 3a9d4a52ac6f559a38c173c19e44fa57 87 SUPERFAMILY SSF160272 1 75 2.75E-16 T 23-04-2016 IPR009962 Protein of unknown function DUF1488 RR42_RS07615 ba026be779652c6d5b3c671780b0bf28 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 189 6.1E-4 T 23-04-2016 RR42_RS07615 ba026be779652c6d5b3c671780b0bf28 246 Gene3D G3DSA:3.40.50.720 2 245 1.6E-80 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS07615 ba026be779652c6d5b3c671780b0bf28 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 245 8.9E-125 T 23-04-2016 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|UniPathway: UPA00917 RR42_RS07615 ba026be779652c6d5b3c671780b0bf28 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 8.5E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS07615 ba026be779652c6d5b3c671780b0bf28 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 8.5E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS07615 ba026be779652c6d5b3c671780b0bf28 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 8.5E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS07615 ba026be779652c6d5b3c671780b0bf28 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 8.5E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS07615 ba026be779652c6d5b3c671780b0bf28 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 8.5E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS07615 ba026be779652c6d5b3c671780b0bf28 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 8.5E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS07615 ba026be779652c6d5b3c671780b0bf28 246 PANTHER PTHR24322:SF328 153 185 5.5E-54 T 23-04-2016 RR42_RS07615 ba026be779652c6d5b3c671780b0bf28 246 PANTHER PTHR24322:SF328 8 137 5.5E-54 T 23-04-2016 RR42_RS07615 ba026be779652c6d5b3c671780b0bf28 246 PANTHER PTHR24322 153 185 5.5E-54 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS07615 ba026be779652c6d5b3c671780b0bf28 246 PANTHER PTHR24322 8 137 5.5E-54 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS07615 ba026be779652c6d5b3c671780b0bf28 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RR42_RS07615 ba026be779652c6d5b3c671780b0bf28 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.0E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS07615 ba026be779652c6d5b3c671780b0bf28 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.0E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS07615 ba026be779652c6d5b3c671780b0bf28 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.0E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS07615 ba026be779652c6d5b3c671780b0bf28 246 Pfam PF00106 short chain dehydrogenase 5 197 1.1E-64 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS07615 ba026be779652c6d5b3c671780b0bf28 246 SUPERFAMILY SSF51735 4 245 5.14E-77 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS01445 3d8db39471ed384bfdcf5dda55616ca4 313 Pfam PF01171 PP-loop family 37 198 3.0E-14 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal RR42_RS01445 3d8db39471ed384bfdcf5dda55616ca4 313 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 5 266 55.673 T 23-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 RR42_RS01445 3d8db39471ed384bfdcf5dda55616ca4 313 Gene3D G3DSA:3.40.50.620 22 202 2.4E-22 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS01445 3d8db39471ed384bfdcf5dda55616ca4 313 PANTHER PTHR11807:SF16 9 261 1.4E-105 T 23-04-2016 RR42_RS01445 3d8db39471ed384bfdcf5dda55616ca4 313 SUPERFAMILY SSF52402 16 230 5.33E-54 T 23-04-2016 RR42_RS01445 3d8db39471ed384bfdcf5dda55616ca4 313 PANTHER PTHR11807 9 261 1.4E-105 T 23-04-2016 RR42_RS06175 39b84d469332cbf47f62b277d3d35aef 429 Gene3D G3DSA:3.20.20.120 128 426 1.0E-133 T 23-04-2016 IPR029065 Enolase C-terminal domain-like RR42_RS06175 39b84d469332cbf47f62b277d3d35aef 429 SUPERFAMILY SSF51604 139 428 5.38E-128 T 23-04-2016 IPR029065 Enolase C-terminal domain-like RR42_RS06175 39b84d469332cbf47f62b277d3d35aef 429 SUPERFAMILY SSF54826 4 136 1.38E-55 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RR42_RS06175 39b84d469332cbf47f62b277d3d35aef 429 Pfam PF03952 Enolase, N-terminal domain 4 133 1.5E-58 T 23-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RR42_RS06175 39b84d469332cbf47f62b277d3d35aef 429 PANTHER PTHR11902 1 429 2.6E-256 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS06175 39b84d469332cbf47f62b277d3d35aef 429 SMART SM01193 4 134 1.3E-94 T 23-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RR42_RS06175 39b84d469332cbf47f62b277d3d35aef 429 ProSitePatterns PS00164 Enolase signature. 336 349 - T 23-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS06175 39b84d469332cbf47f62b277d3d35aef 429 Gene3D G3DSA:3.30.390.10 4 126 1.4E-54 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RR42_RS06175 39b84d469332cbf47f62b277d3d35aef 429 Hamap MF_00318 Enolase [eno]. 2 413 44.729 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS06175 39b84d469332cbf47f62b277d3d35aef 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 427 2.6E-210 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS06175 39b84d469332cbf47f62b277d3d35aef 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 426 2.2E-133 T 23-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RR42_RS06175 39b84d469332cbf47f62b277d3d35aef 429 PIRSF PIRSF001400 1 427 7.9E-191 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS06175 39b84d469332cbf47f62b277d3d35aef 429 SMART SM01192 139 427 7.8E-221 T 23-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RR42_RS06175 39b84d469332cbf47f62b277d3d35aef 429 PRINTS PR00148 Enolase signature 107 123 3.9E-43 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS06175 39b84d469332cbf47f62b277d3d35aef 429 PRINTS PR00148 Enolase signature 161 174 3.9E-43 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS06175 39b84d469332cbf47f62b277d3d35aef 429 PRINTS PR00148 Enolase signature 37 51 3.9E-43 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS06175 39b84d469332cbf47f62b277d3d35aef 429 PRINTS PR00148 Enolase signature 365 382 3.9E-43 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS06175 39b84d469332cbf47f62b277d3d35aef 429 PRINTS PR00148 Enolase signature 336 350 3.9E-43 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS06175 39b84d469332cbf47f62b277d3d35aef 429 PRINTS PR00148 Enolase signature 313 324 3.9E-43 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS16535 a6e92433598981abf7802966a802f906 115 PANTHER PTHR36507:SF1 13 115 1.4E-23 T 23-04-2016 RR42_RS16535 a6e92433598981abf7802966a802f906 115 SUPERFAMILY SSF49503 19 114 1.27E-25 T 23-04-2016 IPR008972 Cupredoxin RR42_RS16535 a6e92433598981abf7802966a802f906 115 Pfam PF13473 Cupredoxin-like domain 19 114 5.5E-15 T 23-04-2016 IPR028096 EfeO-type cupredoxin-like domain RR42_RS16535 a6e92433598981abf7802966a802f906 115 PANTHER PTHR36507 13 115 1.4E-23 T 23-04-2016 RR42_RS16535 a6e92433598981abf7802966a802f906 115 Gene3D G3DSA:2.60.40.420 19 115 1.8E-26 T 23-04-2016 IPR008972 Cupredoxin RR42_RS03070 ebe6f568904172a64402f94d7be6005e 518 Gene3D G3DSA:1.10.287.130 278 346 2.9E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS03070 ebe6f568904172a64402f94d7be6005e 518 Pfam PF00512 His Kinase A (phospho-acceptor) domain 286 349 3.4E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS03070 ebe6f568904172a64402f94d7be6005e 518 SUPERFAMILY SSF55874 340 509 1.7E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS03070 ebe6f568904172a64402f94d7be6005e 518 PANTHER PTHR24423:SF474 226 489 9.3E-68 T 23-04-2016 RR42_RS03070 ebe6f568904172a64402f94d7be6005e 518 PANTHER PTHR24423:SF474 8 24 9.3E-68 T 23-04-2016 RR42_RS03070 ebe6f568904172a64402f94d7be6005e 518 Pfam PF08521 Two-component sensor kinase N-terminal 63 208 1.9E-45 T 23-04-2016 IPR013727 Two-component sensor kinase, N-terminal RR42_RS03070 ebe6f568904172a64402f94d7be6005e 518 SUPERFAMILY SSF47384 268 348 1.59E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS03070 ebe6f568904172a64402f94d7be6005e 518 SMART SM00387 396 513 1.1E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS03070 ebe6f568904172a64402f94d7be6005e 518 Pfam PF00672 HAMP domain 218 279 6.1E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS03070 ebe6f568904172a64402f94d7be6005e 518 Gene3D G3DSA:3.30.565.10 356 512 5.7E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS03070 ebe6f568904172a64402f94d7be6005e 518 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 400 510 1.8E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS03070 ebe6f568904172a64402f94d7be6005e 518 PANTHER PTHR24423 226 489 9.3E-68 T 23-04-2016 RR42_RS03070 ebe6f568904172a64402f94d7be6005e 518 PANTHER PTHR24423 8 24 9.3E-68 T 23-04-2016 RR42_RS03070 ebe6f568904172a64402f94d7be6005e 518 SMART SM00388 285 350 1.1E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS03070 ebe6f568904172a64402f94d7be6005e 518 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 449 1.6E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS03070 ebe6f568904172a64402f94d7be6005e 518 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 1.6E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS00315 58d11d2354625a4eb804eb532e75a21c 215 Pfam PF06902 Divergent 4Fe-4S mono-cluster 7 68 1.8E-19 T 23-04-2016 IPR010693 Divergent 4Fe-4S mono-cluster RR42_RS00315 58d11d2354625a4eb804eb532e75a21c 215 Gene3D G3DSA:3.30.70.20 12 68 8.1E-5 T 23-04-2016 RR42_RS00315 58d11d2354625a4eb804eb532e75a21c 215 SMART SM00704 176 209 8.1E-10 T 23-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 RR42_RS00315 58d11d2354625a4eb804eb532e75a21c 215 SMART SM00704 95 133 4.5E-4 T 23-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 RR42_RS00315 58d11d2354625a4eb804eb532e75a21c 215 Pfam PF09360 Iron-binding zinc finger CDGSH type 160 204 7.2E-16 T 23-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 RR42_RS00315 58d11d2354625a4eb804eb532e75a21c 215 Pfam PF09360 Iron-binding zinc finger CDGSH type 89 127 1.3E-10 T 23-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 RR42_RS11330 7d0fc34ce1bcd0318d23c8469651765f 477 Gene3D G3DSA:3.40.605.10 4 257 9.1E-87 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RR42_RS11330 7d0fc34ce1bcd0318d23c8469651765f 477 SUPERFAMILY SSF53720 4 471 2.49E-158 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RR42_RS11330 7d0fc34ce1bcd0318d23c8469651765f 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 244 251 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RR42_RS11330 7d0fc34ce1bcd0318d23c8469651765f 477 Pfam PF00171 Aldehyde dehydrogenase family 13 469 3.1E-163 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RR42_RS11330 7d0fc34ce1bcd0318d23c8469651765f 477 PANTHER PTHR11699 1 472 8.1E-233 T 23-04-2016 RR42_RS11330 7d0fc34ce1bcd0318d23c8469651765f 477 Gene3D G3DSA:3.40.309.10 258 445 1.3E-63 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RR42_RS11330 7d0fc34ce1bcd0318d23c8469651765f 477 PANTHER PTHR11699:SF212 1 472 8.1E-233 T 23-04-2016 RR42_RS18060 2b4752ab48af855812042735cf427676 302 Pfam PF03799 Cell division protein FtsQ 115 239 2.7E-22 T 23-04-2016 IPR005548 Cell division protein FtsQ/DivIB RR42_RS18060 2b4752ab48af855812042735cf427676 302 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 7 247 21.018 T 23-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 RR42_RS18060 2b4752ab48af855812042735cf427676 302 Pfam PF08478 POTRA domain, FtsQ-type 49 110 1.9E-14 T 23-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type RR42_RS18060 2b4752ab48af855812042735cf427676 302 PANTHER PTHR35851:SF1 4 264 9.2E-35 T 23-04-2016 RR42_RS18060 2b4752ab48af855812042735cf427676 302 PANTHER PTHR35851 4 264 9.2E-35 T 23-04-2016 RR42_RS06245 02f899ffa9d1b84839e16a0b54d2876a 192 SUPERFAMILY SSF53335 6 162 8.11E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS06245 02f899ffa9d1b84839e16a0b54d2876a 192 Gene3D G3DSA:3.40.50.150 7 162 2.1E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS06245 02f899ffa9d1b84839e16a0b54d2876a 192 Pfam PF13649 Methyltransferase domain 26 112 2.1E-8 T 23-04-2016 RR42_RS02470 345b73550486cce4ad2dce7aa94971e0 157 PANTHER PTHR22769:SF28 1 139 1.2E-27 T 23-04-2016 RR42_RS02470 345b73550486cce4ad2dce7aa94971e0 157 PRINTS PR01404 DATP pyrophosphohydrolase signature 126 139 2.4E-15 T 23-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 RR42_RS02470 345b73550486cce4ad2dce7aa94971e0 157 PRINTS PR01404 DATP pyrophosphohydrolase signature 19 40 2.4E-15 T 23-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 RR42_RS02470 345b73550486cce4ad2dce7aa94971e0 157 PRINTS PR01404 DATP pyrophosphohydrolase signature 69 88 2.4E-15 T 23-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 RR42_RS02470 345b73550486cce4ad2dce7aa94971e0 157 Gene3D G3DSA:3.90.79.10 4 141 1.4E-26 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RR42_RS02470 345b73550486cce4ad2dce7aa94971e0 157 PANTHER PTHR22769 1 139 1.2E-27 T 23-04-2016 RR42_RS02470 345b73550486cce4ad2dce7aa94971e0 157 SUPERFAMILY SSF55811 3 144 2.84E-25 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RR42_RS02470 345b73550486cce4ad2dce7aa94971e0 157 Pfam PF00293 NUDIX domain 7 135 3.0E-14 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RR42_RS10100 88b2d6b4326a8d269b2ee02f73d6a7e1 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 262 2.7E-15 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS10100 88b2d6b4326a8d269b2ee02f73d6a7e1 263 Gene3D G3DSA:1.10.3720.10 57 260 8.0E-22 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS10100 88b2d6b4326a8d269b2ee02f73d6a7e1 263 PANTHER PTHR30043 1 262 2.1E-68 T 23-04-2016 RR42_RS10100 88b2d6b4326a8d269b2ee02f73d6a7e1 263 SUPERFAMILY SSF161098 56 254 3.53E-28 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS10100 88b2d6b4326a8d269b2ee02f73d6a7e1 263 PANTHER PTHR30043:SF1 1 262 2.1E-68 T 23-04-2016 RR42_RS02945 0dea67f10480492325b351394247d89e 272 Pfam PF06833 Malonate decarboxylase gamma subunit (MdcE) 12 270 2.0E-85 T 23-04-2016 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal GO:0016874 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RR42_RS02945 0dea67f10480492325b351394247d89e 272 Gene3D G3DSA:3.90.226.10 27 186 2.0E-15 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS02945 0dea67f10480492325b351394247d89e 272 TIGRFAM TIGR03134 malonate_gamma: biotin-independent malonate decarboxylase, gamma subunit 9 270 6.0E-95 T 23-04-2016 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit GO:0044262 MetaCyc: PWY-6060 RR42_RS02945 0dea67f10480492325b351394247d89e 272 SUPERFAMILY SSF52096 25 242 2.72E-19 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS06490 02ab234d1d04ce7df6e386a1c903e986 408 Gene3D G3DSA:1.20.1250.20 207 394 4.8E-23 T 23-04-2016 RR42_RS06490 02ab234d1d04ce7df6e386a1c903e986 408 PIRSF PIRSF004925 11 403 3.6E-117 T 23-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter RR42_RS06490 02ab234d1d04ce7df6e386a1c903e986 408 Gene3D G3DSA:1.20.1250.20 21 193 1.8E-15 T 23-04-2016 RR42_RS06490 02ab234d1d04ce7df6e386a1c903e986 408 Pfam PF12832 MFS_1 like family 21 373 2.5E-64 T 23-04-2016 IPR024989 Major facilitator superfamily associated domain RR42_RS06490 02ab234d1d04ce7df6e386a1c903e986 408 SUPERFAMILY SSF103473 21 394 1.31E-44 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS06490 02ab234d1d04ce7df6e386a1c903e986 408 PANTHER PTHR23522:SF3 9 408 1.7E-76 T 23-04-2016 RR42_RS06490 02ab234d1d04ce7df6e386a1c903e986 408 PANTHER PTHR23522 9 408 1.7E-76 T 23-04-2016 RR42_RS08825 d07dc3f100cbc9a7fdb6253bf498f343 461 PANTHER PTHR23515:SF6 395 459 1.8E-188 T 23-04-2016 RR42_RS08825 d07dc3f100cbc9a7fdb6253bf498f343 461 PANTHER PTHR23515:SF6 1 371 1.8E-188 T 23-04-2016 RR42_RS08825 d07dc3f100cbc9a7fdb6253bf498f343 461 Pfam PF07690 Major Facilitator Superfamily 32 370 1.2E-12 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS08825 d07dc3f100cbc9a7fdb6253bf498f343 461 Gene3D G3DSA:1.20.1250.20 246 452 5.8E-13 T 23-04-2016 RR42_RS08825 d07dc3f100cbc9a7fdb6253bf498f343 461 TIGRFAM TIGR00886 2A0108: nitrite transporter 27 413 6.5E-105 T 23-04-2016 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 RR42_RS08825 d07dc3f100cbc9a7fdb6253bf498f343 461 PANTHER PTHR23515 395 459 1.8E-188 T 23-04-2016 RR42_RS08825 d07dc3f100cbc9a7fdb6253bf498f343 461 PANTHER PTHR23515 1 371 1.8E-188 T 23-04-2016 RR42_RS08825 d07dc3f100cbc9a7fdb6253bf498f343 461 SUPERFAMILY SSF103473 10 455 2.49E-37 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS08825 d07dc3f100cbc9a7fdb6253bf498f343 461 Gene3D G3DSA:1.20.1250.20 22 228 1.4E-14 T 23-04-2016 RR42_RS18545 074a85414f5699eee3c0b33d381d8366 310 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.1E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS18545 074a85414f5699eee3c0b33d381d8366 310 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.1E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS18545 074a85414f5699eee3c0b33d381d8366 310 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.1E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS18545 074a85414f5699eee3c0b33d381d8366 310 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.1E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS18545 074a85414f5699eee3c0b33d381d8366 310 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.1E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS18545 074a85414f5699eee3c0b33d381d8366 310 Gene3D G3DSA:3.40.50.720 3 256 4.8E-71 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS18545 074a85414f5699eee3c0b33d381d8366 310 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 252 5.4E-48 T 23-04-2016 RR42_RS18545 074a85414f5699eee3c0b33d381d8366 310 PANTHER PTHR24322:SF562 14 144 7.9E-49 T 23-04-2016 RR42_RS18545 074a85414f5699eee3c0b33d381d8366 310 PANTHER PTHR24322:SF562 160 194 7.9E-49 T 23-04-2016 RR42_RS18545 074a85414f5699eee3c0b33d381d8366 310 SUPERFAMILY SSF51735 9 254 1.01E-69 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS18545 074a85414f5699eee3c0b33d381d8366 310 PANTHER PTHR24322 14 144 7.9E-49 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS18545 074a85414f5699eee3c0b33d381d8366 310 PANTHER PTHR24322 160 194 7.9E-49 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS09495 43799a7a857d97ab8f5dc7ca1579d118 267 SMART SM00062 40 260 8.8E-45 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RR42_RS09495 43799a7a857d97ab8f5dc7ca1579d118 267 PANTHER PTHR18966 27 256 1.2E-36 T 23-04-2016 RR42_RS09495 43799a7a857d97ab8f5dc7ca1579d118 267 SUPERFAMILY SSF53850 32 260 3.51E-53 T 23-04-2016 RR42_RS09495 43799a7a857d97ab8f5dc7ca1579d118 267 PANTHER PTHR18966:SF231 27 256 1.2E-36 T 23-04-2016 RR42_RS09495 43799a7a857d97ab8f5dc7ca1579d118 267 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 258 1.5E-50 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RR42_RS09495 43799a7a857d97ab8f5dc7ca1579d118 267 Gene3D G3DSA:3.40.190.10 37 117 8.4E-33 T 23-04-2016 RR42_RS09495 43799a7a857d97ab8f5dc7ca1579d118 267 Gene3D G3DSA:3.40.190.10 219 260 8.4E-33 T 23-04-2016 RR42_RS09495 43799a7a857d97ab8f5dc7ca1579d118 267 Gene3D G3DSA:3.40.190.10 118 210 7.2E-13 T 23-04-2016 RR42_RS09495 43799a7a857d97ab8f5dc7ca1579d118 267 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 63 76 - T 23-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 RR42_RS06810 8879eb924eb815aa0e0aa0675ab4ed5f 108 Pfam PF16786 Recombination enhancement, RecA-dependent nuclease 6 65 1.0E-8 T 23-04-2016 IPR031875 Recombination enhancement, RecA-dependent nuclease RR42_RS20300 35ccc7a92103a749f1e7cd6db76a3a33 166 Gene3D G3DSA:1.10.1660.10 6 59 7.6E-27 T 23-04-2016 RR42_RS20300 35ccc7a92103a749f1e7cd6db76a3a33 166 PANTHER PTHR30204 1 131 1.1E-57 T 23-04-2016 RR42_RS20300 35ccc7a92103a749f1e7cd6db76a3a33 166 Pfam PF00376 MerR family regulatory protein 6 43 1.7E-18 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RR42_RS20300 35ccc7a92103a749f1e7cd6db76a3a33 166 SUPERFAMILY SSF46955 6 129 4.4E-40 T 23-04-2016 IPR009061 Putative DNA-binding domain RR42_RS20300 35ccc7a92103a749f1e7cd6db76a3a33 166 PANTHER PTHR30204:SF16 1 131 1.1E-57 T 23-04-2016 RR42_RS20300 35ccc7a92103a749f1e7cd6db76a3a33 166 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RR42_RS20300 35ccc7a92103a749f1e7cd6db76a3a33 166 Pfam PF09278 MerR, DNA binding 48 112 2.2E-23 T 23-04-2016 IPR015358 Transcription regulator MerR, DNA binding RR42_RS20300 35ccc7a92103a749f1e7cd6db76a3a33 166 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 6 130 9.4E-56 T 23-04-2016 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 RR42_RS20300 35ccc7a92103a749f1e7cd6db76a3a33 166 Gene3D G3DSA:1.10.1660.10 60 133 1.8E-31 T 23-04-2016 RR42_RS20300 35ccc7a92103a749f1e7cd6db76a3a33 166 SMART SM00422 6 74 1.6E-31 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RR42_RS20300 35ccc7a92103a749f1e7cd6db76a3a33 166 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 6 17 8.79E-12 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RR42_RS20300 35ccc7a92103a749f1e7cd6db76a3a33 166 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 17 30 8.79E-12 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RR42_RS20300 35ccc7a92103a749f1e7cd6db76a3a33 166 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 41 61 8.79E-12 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RR42_RS00905 de9e4de32626cdb42bd95ee17c04654f 229 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 150 199 3.6E-14 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS00905 de9e4de32626cdb42bd95ee17c04654f 229 SUPERFAMILY SSF56784 12 228 4.13E-51 T 23-04-2016 IPR023214 HAD-like domain RR42_RS00905 de9e4de32626cdb42bd95ee17c04654f 229 Gene3D G3DSA:3.40.50.1000 99 227 1.0E-41 T 23-04-2016 IPR023214 HAD-like domain RR42_RS00905 de9e4de32626cdb42bd95ee17c04654f 229 Gene3D G3DSA:3.40.50.1000 10 27 1.0E-41 T 23-04-2016 IPR023214 HAD-like domain RR42_RS00905 de9e4de32626cdb42bd95ee17c04654f 229 Gene3D G3DSA:1.10.150.240 28 94 3.5E-13 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RR42_RS00905 de9e4de32626cdb42bd95ee17c04654f 229 PANTHER PTHR18901 12 225 2.7E-55 T 23-04-2016 RR42_RS00905 de9e4de32626cdb42bd95ee17c04654f 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 16 199 4.7E-24 T 23-04-2016 IPR023214 HAD-like domain RR42_RS00905 de9e4de32626cdb42bd95ee17c04654f 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 13 24 4.1E-7 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS00905 de9e4de32626cdb42bd95ee17c04654f 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 144 160 4.1E-7 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS00905 de9e4de32626cdb42bd95ee17c04654f 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 108 121 4.1E-7 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS00905 de9e4de32626cdb42bd95ee17c04654f 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 162 182 4.1E-7 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS00905 de9e4de32626cdb42bd95ee17c04654f 229 PANTHER PTHR18901:SF9 12 225 2.7E-55 T 23-04-2016 RR42_RS00740 d1beb524393ea9f9c6b48d2e87c3ae34 318 PANTHER PTHR30349:SF16 2 286 8.8E-95 T 23-04-2016 RR42_RS00740 d1beb524393ea9f9c6b48d2e87c3ae34 318 PANTHER PTHR30349 2 286 8.8E-95 T 23-04-2016 RR42_RS00740 d1beb524393ea9f9c6b48d2e87c3ae34 318 SUPERFAMILY SSF53850 105 281 4.11E-13 T 23-04-2016 RR42_RS00740 d1beb524393ea9f9c6b48d2e87c3ae34 318 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 41 315 1.1E-94 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS00740 d1beb524393ea9f9c6b48d2e87c3ae34 318 PIRSF PIRSF017082 1 318 1.0E-76 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS03110 9a715815c0be2d27218baf685783d977 152 SUPERFAMILY SSF54523 12 137 1.94E-24 T 23-04-2016 RR42_RS03110 9a715815c0be2d27218baf685783d977 152 PRINTS PR00813 Bacterial general secretion pathway protein G signature 47 65 1.8E-9 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RR42_RS03110 9a715815c0be2d27218baf685783d977 152 PRINTS PR00813 Bacterial general secretion pathway protein G signature 11 36 1.8E-9 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RR42_RS03110 9a715815c0be2d27218baf685783d977 152 Pfam PF13633 Prokaryotic N-terminal methylation site 9 33 2.4E-12 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS03110 9a715815c0be2d27218baf685783d977 152 Gene3D G3DSA:3.30.700.10 12 132 2.5E-29 T 23-04-2016 RR42_RS03110 9a715815c0be2d27218baf685783d977 152 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 8.6E-11 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS03110 9a715815c0be2d27218baf685783d977 152 PANTHER PTHR30093 1 79 3.3E-22 T 23-04-2016 RR42_RS03110 9a715815c0be2d27218baf685783d977 152 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS09585 a2f596694e44cf597dc04631a514eb03 243 PANTHER PTHR24567:SF28 20 240 1.9E-57 T 23-04-2016 RR42_RS09585 a2f596694e44cf597dc04631a514eb03 243 Gene3D G3DSA:1.10.10.10 172 243 2.6E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS09585 a2f596694e44cf597dc04631a514eb03 243 Gene3D G3DSA:2.60.120.10 20 171 3.1E-21 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS09585 a2f596694e44cf597dc04631a514eb03 243 SMART SM00419 188 236 1.2E-15 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RR42_RS09585 a2f596694e44cf597dc04631a514eb03 243 Pfam PF13545 Crp-like helix-turn-helix domain 169 243 5.3E-21 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RR42_RS09585 a2f596694e44cf597dc04631a514eb03 243 PANTHER PTHR24567 20 240 1.9E-57 T 23-04-2016 RR42_RS09585 a2f596694e44cf597dc04631a514eb03 243 SUPERFAMILY SSF46785 167 242 6.59E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS09585 a2f596694e44cf597dc04631a514eb03 243 SUPERFAMILY SSF51206 24 163 1.83E-26 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like RR42_RS09585 a2f596694e44cf597dc04631a514eb03 243 Pfam PF00027 Cyclic nucleotide-binding domain 52 135 5.9E-13 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain RR42_RS09585 a2f596694e44cf597dc04631a514eb03 243 SMART SM00100 31 152 2.0E-7 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain RR42_RS09585 a2f596694e44cf597dc04631a514eb03 243 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 194 210 3.1E-11 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RR42_RS09585 a2f596694e44cf597dc04631a514eb03 243 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 210 225 3.1E-11 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RR42_RS02500 f5bad0cd9969964bd5ff98bc4dbebe11 196 SUPERFAMILY SSF48498 77 191 5.04E-20 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RR42_RS02500 f5bad0cd9969964bd5ff98bc4dbebe11 196 Gene3D G3DSA:1.10.357.10 57 194 1.1E-55 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS02500 f5bad0cd9969964bd5ff98bc4dbebe11 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 7.7E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS02500 f5bad0cd9969964bd5ff98bc4dbebe11 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 7.7E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS02500 f5bad0cd9969964bd5ff98bc4dbebe11 196 Gene3D G3DSA:1.10.10.60 2 56 1.2E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS02500 f5bad0cd9969964bd5ff98bc4dbebe11 196 SUPERFAMILY SSF46689 2 69 3.28E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS02500 f5bad0cd9969964bd5ff98bc4dbebe11 196 PANTHER PTHR30055 2 191 3.5E-23 T 23-04-2016 RR42_RS02500 f5bad0cd9969964bd5ff98bc4dbebe11 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 55 6.8E-10 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS10915 95a68f0566b03c2e1d3b2295141532e9 331 PIRSF PIRSF006487 3 303 5.8E-13 T 23-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RR42_RS10915 95a68f0566b03c2e1d3b2295141532e9 331 SUPERFAMILY SSF103025 6 246 3.77E-64 T 23-04-2016 RR42_RS10915 95a68f0566b03c2e1d3b2295141532e9 331 PANTHER PTHR22602 28 272 5.2E-46 T 23-04-2016 RR42_RS10915 95a68f0566b03c2e1d3b2295141532e9 331 Pfam PF01571 Aminomethyltransferase folate-binding domain 13 220 7.9E-14 T 23-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal RR42_RS10915 95a68f0566b03c2e1d3b2295141532e9 331 Gene3D G3DSA:3.30.70.1400 28 111 1.1E-27 T 23-04-2016 RR42_RS10915 95a68f0566b03c2e1d3b2295141532e9 331 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 191 255 9.5E-28 T 23-04-2016 IPR017703 YgfZ/GcvT conserved site RR42_RS10915 95a68f0566b03c2e1d3b2295141532e9 331 PANTHER PTHR22602:SF0 28 272 5.2E-46 T 23-04-2016 RR42_RS20745 43fb785f8cd0230b1f7befd8e5cfa6ad 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.7E-14 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS20745 43fb785f8cd0230b1f7befd8e5cfa6ad 309 PANTHER PTHR30126 1 303 4.1E-54 T 23-04-2016 RR42_RS20745 43fb785f8cd0230b1f7befd8e5cfa6ad 309 SUPERFAMILY SSF46785 1 84 1.56E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS20745 43fb785f8cd0230b1f7befd8e5cfa6ad 309 SUPERFAMILY SSF53850 92 306 3.44E-16 T 23-04-2016 RR42_RS20745 43fb785f8cd0230b1f7befd8e5cfa6ad 309 Gene3D G3DSA:3.40.190.10 81 212 1.5E-8 T 23-04-2016 RR42_RS20745 43fb785f8cd0230b1f7befd8e5cfa6ad 309 PANTHER PTHR30126:SF2 1 303 4.1E-54 T 23-04-2016 RR42_RS20745 43fb785f8cd0230b1f7befd8e5cfa6ad 309 Pfam PF03466 LysR substrate binding domain 89 306 6.3E-15 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS20745 43fb785f8cd0230b1f7befd8e5cfa6ad 309 Gene3D G3DSA:3.40.190.10 228 271 2.0E-5 T 23-04-2016 RR42_RS20745 43fb785f8cd0230b1f7befd8e5cfa6ad 309 Gene3D G3DSA:1.10.10.10 1 80 2.4E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS15840 3c6b01fb9c84c1fec0716ee1acc5cee5 354 PANTHER PTHR10366 3 352 2.7E-162 T 23-04-2016 RR42_RS15840 3c6b01fb9c84c1fec0716ee1acc5cee5 354 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 338 8.1E-148 T 23-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 RR42_RS15840 3c6b01fb9c84c1fec0716ee1acc5cee5 354 Gene3D G3DSA:3.90.25.10 194 341 3.3E-52 T 23-04-2016 RR42_RS15840 3c6b01fb9c84c1fec0716ee1acc5cee5 354 PANTHER PTHR10366:SF41 3 352 2.7E-162 T 23-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 RR42_RS15840 3c6b01fb9c84c1fec0716ee1acc5cee5 354 SUPERFAMILY SSF51735 3 344 9.28E-89 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS15840 3c6b01fb9c84c1fec0716ee1acc5cee5 354 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 325 1.4E-94 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS15840 3c6b01fb9c84c1fec0716ee1acc5cee5 354 Gene3D G3DSA:3.40.50.720 3 193 3.9E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS18050 23f1e5a658ccb0084479eee117796b82 399 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 172 1.1E-35 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RR42_RS18050 23f1e5a658ccb0084479eee117796b82 399 PANTHER PTHR30314:SF3 4 397 7.8E-159 T 23-04-2016 RR42_RS18050 23f1e5a658ccb0084479eee117796b82 399 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 23-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 RR42_RS18050 23f1e5a658ccb0084479eee117796b82 399 SMART SM00865 206 324 7.9E-53 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RR42_RS18050 23f1e5a658ccb0084479eee117796b82 399 PRINTS PR00423 Cell division protein FtsZ signature 97 117 3.1E-46 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RR42_RS18050 23f1e5a658ccb0084479eee117796b82 399 PRINTS PR00423 Cell division protein FtsZ signature 188 210 3.1E-46 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RR42_RS18050 23f1e5a658ccb0084479eee117796b82 399 PRINTS PR00423 Cell division protein FtsZ signature 211 232 3.1E-46 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RR42_RS18050 23f1e5a658ccb0084479eee117796b82 399 PRINTS PR00423 Cell division protein FtsZ signature 125 146 3.1E-46 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RR42_RS18050 23f1e5a658ccb0084479eee117796b82 399 SMART SM00864 15 204 6.9E-101 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RR42_RS18050 23f1e5a658ccb0084479eee117796b82 399 Gene3D G3DSA:3.40.50.1440 16 213 4.2E-83 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RR42_RS18050 23f1e5a658ccb0084479eee117796b82 399 PANTHER PTHR30314 4 397 7.8E-159 T 23-04-2016 RR42_RS18050 23f1e5a658ccb0084479eee117796b82 399 SUPERFAMILY SSF55307 203 318 1.63E-39 T 23-04-2016 IPR008280 Tubulin/FtsZ, C-terminal RR42_RS18050 23f1e5a658ccb0084479eee117796b82 399 SUPERFAMILY SSF52490 16 207 9.68E-61 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RR42_RS18050 23f1e5a658ccb0084479eee117796b82 399 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 11 384 34.703 T 23-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 RR42_RS18050 23f1e5a658ccb0084479eee117796b82 399 Gene3D G3DSA:3.30.1330.20 214 321 1.9E-44 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RR42_RS18050 23f1e5a658ccb0084479eee117796b82 399 Pfam PF12327 FtsZ family, C-terminal domain 221 315 4.0E-31 T 23-04-2016 IPR024757 Cell division protein FtsZ, C-terminal RR42_RS18050 23f1e5a658ccb0084479eee117796b82 399 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 325 1.0E-116 T 23-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 RR42_RS12895 86df4d4b26fe9d863378953b353dba88 308 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 37 298 1.9E-85 T 23-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 RR42_RS12895 86df4d4b26fe9d863378953b353dba88 308 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 133 205 1.8E-12 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS12895 86df4d4b26fe9d863378953b353dba88 308 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 218 293 1.9E-12 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS12895 86df4d4b26fe9d863378953b353dba88 308 SUPERFAMILY SSF46626 218 298 5.38E-21 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS12895 86df4d4b26fe9d863378953b353dba88 308 PANTHER PTHR33751:SF1 29 303 1.8E-79 T 23-04-2016 RR42_RS12895 86df4d4b26fe9d863378953b353dba88 308 SUPERFAMILY SSF46626 60 94 5.09E-31 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS12895 86df4d4b26fe9d863378953b353dba88 308 PANTHER PTHR33751 29 303 1.8E-79 T 23-04-2016 RR42_RS12895 86df4d4b26fe9d863378953b353dba88 308 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 42 87 1.0E-23 T 23-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 RR42_RS12895 86df4d4b26fe9d863378953b353dba88 308 PIRSF PIRSF000006 5 300 5.1E-105 T 23-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 RR42_RS12895 86df4d4b26fe9d863378953b353dba88 308 SUPERFAMILY SSF46626 122 211 5.09E-31 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS12895 86df4d4b26fe9d863378953b353dba88 308 Gene3D G3DSA:1.10.760.10 213 298 4.1E-23 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS12895 86df4d4b26fe9d863378953b353dba88 308 Gene3D G3DSA:1.10.760.10 126 210 5.0E-30 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS12895 86df4d4b26fe9d863378953b353dba88 308 Gene3D G3DSA:1.10.760.10 65 87 5.0E-30 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS22620 349d6412d183b7c84e472004135e894c 131 PANTHER PTHR22931:SF28 1 131 2.0E-42 T 23-04-2016 RR42_RS22620 349d6412d183b7c84e472004135e894c 131 Gene3D G3DSA:3.20.20.60 1 130 5.8E-43 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS22620 349d6412d183b7c84e472004135e894c 131 PANTHER PTHR22931 1 131 2.0E-42 T 23-04-2016 RR42_RS22620 349d6412d183b7c84e472004135e894c 131 SUPERFAMILY SSF51621 1 130 7.07E-43 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS22620 349d6412d183b7c84e472004135e894c 131 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 87 105 - T 23-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RR42_RS22620 349d6412d183b7c84e472004135e894c 131 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 1 130 9.1E-50 T 23-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RR42_RS22620 349d6412d183b7c84e472004135e894c 131 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 87 102 5.0E-12 T 23-04-2016 RR42_RS22620 349d6412d183b7c84e472004135e894c 131 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 104 119 5.0E-12 T 23-04-2016 RR42_RS04465 6166218e64a7803311d673d6d4e70808 371 Gene3D G3DSA:3.40.640.10 52 269 3.1E-71 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS04465 6166218e64a7803311d673d6d4e70808 371 Pfam PF00155 Aminotransferase class I and II 39 359 2.1E-52 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RR42_RS04465 6166218e64a7803311d673d6d4e70808 371 PANTHER PTHR11751 24 368 6.3E-98 T 23-04-2016 RR42_RS04465 6166218e64a7803311d673d6d4e70808 371 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 227 236 - T 23-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 RR42_RS04465 6166218e64a7803311d673d6d4e70808 371 Gene3D G3DSA:3.90.1150.10 270 371 5.5E-23 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS04465 6166218e64a7803311d673d6d4e70808 371 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 12 368 2.6E-107 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 RR42_RS04465 6166218e64a7803311d673d6d4e70808 371 PANTHER PTHR11751:SF347 24 368 6.3E-98 T 23-04-2016 RR42_RS04465 6166218e64a7803311d673d6d4e70808 371 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 8 370 62.735 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 RR42_RS04465 6166218e64a7803311d673d6d4e70808 371 SUPERFAMILY SSF53383 11 366 4.49E-81 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS02110 4cf8ed243aac23959b134e17ccd9ab88 659 Pfam PF02080 TrkA-C domain 589 655 1.2E-11 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RR42_RS02110 4cf8ed243aac23959b134e17ccd9ab88 659 PANTHER PTHR16254 8 567 2.5E-173 T 23-04-2016 RR42_RS02110 4cf8ed243aac23959b134e17ccd9ab88 659 Gene3D G3DSA:3.40.50.720 408 541 4.1E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS02110 4cf8ed243aac23959b134e17ccd9ab88 659 Gene3D G3DSA:3.30.70.1450 584 654 2.7E-14 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RR42_RS02110 4cf8ed243aac23959b134e17ccd9ab88 659 Pfam PF00999 Sodium/hydrogen exchanger family 8 376 5.9E-69 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RR42_RS02110 4cf8ed243aac23959b134e17ccd9ab88 659 SUPERFAMILY SSF51735 410 553 2.75E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS02110 4cf8ed243aac23959b134e17ccd9ab88 659 SUPERFAMILY SSF116726 578 654 7.32E-13 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RR42_RS02110 4cf8ed243aac23959b134e17ccd9ab88 659 Pfam PF02254 TrkA-N domain 414 526 1.0E-23 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RR42_RS02110 4cf8ed243aac23959b134e17ccd9ab88 659 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 287 1.6E-72 T 23-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 RR42_RS04985 96e45bd14a99a9993a145e6aa5b855f5 480 SUPERFAMILY SSF46785 3 73 6.14E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS04985 96e45bd14a99a9993a145e6aa5b855f5 480 Gene3D G3DSA:3.40.640.10 151 353 1.1E-56 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS04985 96e45bd14a99a9993a145e6aa5b855f5 480 Pfam PF00155 Aminotransferase class I and II 144 458 4.4E-25 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RR42_RS04985 96e45bd14a99a9993a145e6aa5b855f5 480 Gene3D G3DSA:1.10.10.10 3 70 8.6E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS04985 96e45bd14a99a9993a145e6aa5b855f5 480 PANTHER PTHR11751 91 469 1.2E-101 T 23-04-2016 RR42_RS04985 96e45bd14a99a9993a145e6aa5b855f5 480 PANTHER PTHR11751:SF314 91 469 1.2E-101 T 23-04-2016 RR42_RS04985 96e45bd14a99a9993a145e6aa5b855f5 480 SMART SM00345 10 69 5.0E-16 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS04985 96e45bd14a99a9993a145e6aa5b855f5 480 Gene3D G3DSA:3.90.1150.10 354 476 7.9E-6 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS04985 96e45bd14a99a9993a145e6aa5b855f5 480 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 69 3.7E-13 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS04985 96e45bd14a99a9993a145e6aa5b855f5 480 SUPERFAMILY SSF53383 113 476 4.52E-83 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS20815 8359d53b122ba09ec81ce919d5d02b66 145 SUPERFAMILY SSF54637 17 140 6.56E-30 T 23-04-2016 IPR029069 HotDog domain RR42_RS20815 8359d53b122ba09ec81ce919d5d02b66 145 PANTHER PTHR12418 7 144 3.5E-23 T 23-04-2016 RR42_RS20815 8359d53b122ba09ec81ce919d5d02b66 145 Gene3D G3DSA:3.10.129.10 12 142 2.4E-32 T 23-04-2016 IPR029069 HotDog domain RR42_RS20815 8359d53b122ba09ec81ce919d5d02b66 145 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 24 123 1.5E-18 T 23-04-2016 IPR003736 Phenylacetic acid degradation-related domain RR42_RS20815 8359d53b122ba09ec81ce919d5d02b66 145 Pfam PF03061 Thioesterase superfamily 53 124 7.8E-16 T 23-04-2016 IPR006683 Thioesterase domain RR42_RS11115 351cc4fcabe398b37db4dcd1a781a8ce 323 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 10 311 6.4E-66 T 23-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin RR42_RS11115 351cc4fcabe398b37db4dcd1a781a8ce 323 Gene3D G3DSA:3.30.1780.10 7 142 3.2E-38 T 23-04-2016 IPR023401 Ornithine cyclodeaminase, N-terminal RR42_RS11115 351cc4fcabe398b37db4dcd1a781a8ce 323 PIRSF PIRSF001439 1 322 8.4E-85 T 23-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin RR42_RS11115 351cc4fcabe398b37db4dcd1a781a8ce 323 Gene3D G3DSA:3.40.50.720 143 294 6.8E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS11115 351cc4fcabe398b37db4dcd1a781a8ce 323 PANTHER PTHR13812 6 323 1.3E-64 T 23-04-2016 RR42_RS11115 351cc4fcabe398b37db4dcd1a781a8ce 323 SUPERFAMILY SSF51735 7 321 8.16E-80 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS11115 351cc4fcabe398b37db4dcd1a781a8ce 323 PANTHER PTHR13812:SF19 6 323 1.3E-64 T 23-04-2016 RR42_RS17070 b9191daf2a11090e2f4633ac47f144da 963 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 23 877 3.6E-257 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RR42_RS17070 b9191daf2a11090e2f4633ac47f144da 963 Pfam PF06827 Zinc finger found in FPG and IleRS 925 950 5.4E-7 T 23-04-2016 IPR010663 Zinc finger, FPG/IleRS-type RR42_RS17070 b9191daf2a11090e2f4633ac47f144da 963 Gene3D G3DSA:1.10.730.10 676 859 9.7E-37 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS17070 b9191daf2a11090e2f4633ac47f144da 963 PANTHER PTHR11946:SF11 16 267 0.0 T 23-04-2016 RR42_RS17070 b9191daf2a11090e2f4633ac47f144da 963 PANTHER PTHR11946:SF11 290 910 0.0 T 23-04-2016 RR42_RS17070 b9191daf2a11090e2f4633ac47f144da 963 Gene3D G3DSA:3.40.50.620 21 205 5.1E-125 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS17070 b9191daf2a11090e2f4633ac47f144da 963 Gene3D G3DSA:3.40.50.620 421 671 5.1E-125 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS17070 b9191daf2a11090e2f4633ac47f144da 963 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 36 676 4.3E-204 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS17070 b9191daf2a11090e2f4633ac47f144da 963 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 66 77 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS17070 b9191daf2a11090e2f4633ac47f144da 963 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 246 269 5.2E-26 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RR42_RS17070 b9191daf2a11090e2f4633ac47f144da 963 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 596 605 5.2E-26 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RR42_RS17070 b9191daf2a11090e2f4633ac47f144da 963 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 416 431 5.2E-26 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RR42_RS17070 b9191daf2a11090e2f4633ac47f144da 963 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 59 70 5.2E-26 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RR42_RS17070 b9191daf2a11090e2f4633ac47f144da 963 SUPERFAMILY SSF47323 687 953 7.48E-69 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS17070 b9191daf2a11090e2f4633ac47f144da 963 Gene3D G3DSA:3.90.740.10 213 404 2.0E-49 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RR42_RS17070 b9191daf2a11090e2f4633ac47f144da 963 SUPERFAMILY SSF50677 209 418 1.57E-48 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RR42_RS17070 b9191daf2a11090e2f4633ac47f144da 963 Pfam PF08264 Anticodon-binding domain of tRNA 720 877 1.2E-22 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RR42_RS17070 b9191daf2a11090e2f4633ac47f144da 963 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 10 954 20.0 T 23-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 RR42_RS17070 b9191daf2a11090e2f4633ac47f144da 963 PANTHER PTHR11946 16 267 0.0 T 23-04-2016 RR42_RS17070 b9191daf2a11090e2f4633ac47f144da 963 PANTHER PTHR11946 290 910 0.0 T 23-04-2016 RR42_RS17070 b9191daf2a11090e2f4633ac47f144da 963 SUPERFAMILY SSF52374 20 209 1.97E-124 T 23-04-2016 RR42_RS17070 b9191daf2a11090e2f4633ac47f144da 963 SUPERFAMILY SSF52374 418 683 1.97E-124 T 23-04-2016 RR42_RS04600 da8da325f29181c114dd6ef1db9e7067 308 SUPERFAMILY SSF53850 91 295 1.07E-51 T 23-04-2016 RR42_RS04600 da8da325f29181c114dd6ef1db9e7067 308 SUPERFAMILY SSF46785 2 112 1.36E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS04600 da8da325f29181c114dd6ef1db9e7067 308 Gene3D G3DSA:3.40.190.10 93 177 1.5E-25 T 23-04-2016 RR42_RS04600 da8da325f29181c114dd6ef1db9e7067 308 PANTHER PTHR30537:SF5 1 308 5.9E-124 T 23-04-2016 RR42_RS04600 da8da325f29181c114dd6ef1db9e7067 308 PANTHER PTHR30537 1 308 5.9E-124 T 23-04-2016 RR42_RS04600 da8da325f29181c114dd6ef1db9e7067 308 Gene3D G3DSA:1.10.10.10 2 83 2.3E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS04600 da8da325f29181c114dd6ef1db9e7067 308 Gene3D G3DSA:3.40.190.10 178 258 1.8E-22 T 23-04-2016 RR42_RS04600 da8da325f29181c114dd6ef1db9e7067 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 5.9E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS04600 da8da325f29181c114dd6ef1db9e7067 308 Pfam PF03466 LysR substrate binding domain 89 291 4.3E-52 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS03005 9db8d2b9d7b7de0cf62a6840425e5528 254 Pfam PF00106 short chain dehydrogenase 8 203 1.3E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS03005 9db8d2b9d7b7de0cf62a6840425e5528 254 PANTHER PTHR24322:SF356 10 144 4.2E-41 T 23-04-2016 RR42_RS03005 9db8d2b9d7b7de0cf62a6840425e5528 254 PANTHER PTHR24322:SF356 160 196 4.2E-41 T 23-04-2016 RR42_RS03005 9db8d2b9d7b7de0cf62a6840425e5528 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 9.6E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS03005 9db8d2b9d7b7de0cf62a6840425e5528 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 9.6E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS03005 9db8d2b9d7b7de0cf62a6840425e5528 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 9.6E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS03005 9db8d2b9d7b7de0cf62a6840425e5528 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 9.6E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS03005 9db8d2b9d7b7de0cf62a6840425e5528 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 9.6E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS03005 9db8d2b9d7b7de0cf62a6840425e5528 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 9.6E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS03005 9db8d2b9d7b7de0cf62a6840425e5528 254 SUPERFAMILY SSF51735 1 251 2.22E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS03005 9db8d2b9d7b7de0cf62a6840425e5528 254 PANTHER PTHR24322 10 144 4.2E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS03005 9db8d2b9d7b7de0cf62a6840425e5528 254 PANTHER PTHR24322 160 196 4.2E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS03005 9db8d2b9d7b7de0cf62a6840425e5528 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 196 4.6E-4 T 23-04-2016 RR42_RS03005 9db8d2b9d7b7de0cf62a6840425e5528 254 Gene3D G3DSA:3.40.50.720 2 250 5.5E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS03005 9db8d2b9d7b7de0cf62a6840425e5528 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RR42_RS09240 a2306060a971e81196d7502da7d1568a 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 88 1.0E-13 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS09240 a2306060a971e81196d7502da7d1568a 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 56 72 1.0E-13 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS09240 a2306060a971e81196d7502da7d1568a 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 1.0E-13 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS09240 a2306060a971e81196d7502da7d1568a 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 108 1.0E-13 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS09240 a2306060a971e81196d7502da7d1568a 145 Gene3D G3DSA:1.10.10.10 6 143 2.9E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS09240 a2306060a971e81196d7502da7d1568a 145 Pfam PF01047 MarR family 39 97 1.3E-13 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS09240 a2306060a971e81196d7502da7d1568a 145 SUPERFAMILY SSF46785 3 144 1.97E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS09240 a2306060a971e81196d7502da7d1568a 145 PANTHER PTHR33164 9 142 2.7E-24 T 23-04-2016 RR42_RS09240 a2306060a971e81196d7502da7d1568a 145 SMART SM00347 32 132 4.0E-20 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS00230 cae928f6eebada32eb704064e4b7da9d 364 Pfam PF03747 ADP-ribosylglycohydrolase 8 317 3.5E-70 T 23-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 RR42_RS00230 cae928f6eebada32eb704064e4b7da9d 364 SUPERFAMILY SSF101478 124 336 2.09E-60 T 23-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 RR42_RS00230 cae928f6eebada32eb704064e4b7da9d 364 SUPERFAMILY SSF101478 3 97 2.09E-60 T 23-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 RR42_RS00230 cae928f6eebada32eb704064e4b7da9d 364 PANTHER PTHR16222 3 336 8.5E-54 T 23-04-2016 RR42_RS00230 cae928f6eebada32eb704064e4b7da9d 364 PANTHER PTHR16222:SF12 3 336 8.5E-54 T 23-04-2016 RR42_RS04545 cd9f0fce59da53cfdc9ce9ece8fad3ab 307 PRINTS PR01270 Histone deacetylase superfamily signature 234 244 7.4E-17 T 23-04-2016 IPR000286 Histone deacetylase superfamily RR42_RS04545 cd9f0fce59da53cfdc9ce9ece8fad3ab 307 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 7.4E-17 T 23-04-2016 IPR000286 Histone deacetylase superfamily RR42_RS04545 cd9f0fce59da53cfdc9ce9ece8fad3ab 307 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 7.4E-17 T 23-04-2016 IPR000286 Histone deacetylase superfamily RR42_RS04545 cd9f0fce59da53cfdc9ce9ece8fad3ab 307 SUPERFAMILY SSF52768 1 306 1.77E-104 T 23-04-2016 RR42_RS04545 cd9f0fce59da53cfdc9ce9ece8fad3ab 307 Pfam PF00850 Histone deacetylase domain 20 304 9.2E-84 T 23-04-2016 IPR023801 Histone deacetylase domain RR42_RS04545 cd9f0fce59da53cfdc9ce9ece8fad3ab 307 Gene3D G3DSA:3.40.800.20 3 306 6.3E-107 T 23-04-2016 IPR023801 Histone deacetylase domain RR42_RS04545 cd9f0fce59da53cfdc9ce9ece8fad3ab 307 PANTHER PTHR10625 8 307 4.6E-99 T 23-04-2016 IPR000286 Histone deacetylase superfamily RR42_RS08800 232b3f14d3d48d7c0ed95a68750ed6b5 248 Pfam PF00639 PPIC-type PPIASE domain 99 191 6.0E-17 T 23-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 RR42_RS08800 232b3f14d3d48d7c0ed95a68750ed6b5 248 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 131 151 - T 23-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site RR42_RS08800 232b3f14d3d48d7c0ed95a68750ed6b5 248 SUPERFAMILY SSF54534 89 194 2.42E-19 T 23-04-2016 RR42_RS08800 232b3f14d3d48d7c0ed95a68750ed6b5 248 Gene3D G3DSA:3.10.50.40 87 213 2.3E-23 T 23-04-2016 RR42_RS08800 232b3f14d3d48d7c0ed95a68750ed6b5 248 PANTHER PTHR10657 56 226 1.4E-20 T 23-04-2016 RR42_RS08800 232b3f14d3d48d7c0ed95a68750ed6b5 248 PANTHER PTHR10657:SF11 56 226 1.4E-20 T 23-04-2016 RR42_RS02345 70c487fb3b39f2cea1777085aed4ec46 193 PANTHER PTHR38588:SF1 2 144 8.0E-33 T 23-04-2016 RR42_RS02345 70c487fb3b39f2cea1777085aed4ec46 193 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 7 144 6.4E-42 T 23-04-2016 IPR010419 Carbon monoxide dehydrogenase subunit G RR42_RS02345 70c487fb3b39f2cea1777085aed4ec46 193 PANTHER PTHR38588 2 144 8.0E-33 T 23-04-2016 RR42_RS02345 70c487fb3b39f2cea1777085aed4ec46 193 SUPERFAMILY SSF55961 1 145 4.13E-41 T 23-04-2016 RR42_RS02345 70c487fb3b39f2cea1777085aed4ec46 193 Gene3D G3DSA:3.30.530.20 1 154 1.5E-60 T 23-04-2016 IPR023393 START-like domain RR42_RS12935 74e72435030b28313f4986f6dc5993d9 415 Gene3D G3DSA:2.40.50.100 2 96 4.1E-27 T 23-04-2016 RR42_RS12935 74e72435030b28313f4986f6dc5993d9 415 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 414 8.6E-169 T 23-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 RR42_RS12935 74e72435030b28313f4986f6dc5993d9 415 SUPERFAMILY SSF47005 107 147 2.35E-9 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RR42_RS12935 74e72435030b28313f4986f6dc5993d9 415 Pfam PF02817 e3 binding domain 110 144 8.0E-11 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RR42_RS12935 74e72435030b28313f4986f6dc5993d9 415 Pfam PF00364 Biotin-requiring enzyme 5 77 1.6E-21 T 23-04-2016 IPR000089 Biotin/lipoyl attachment RR42_RS12935 74e72435030b28313f4986f6dc5993d9 415 SUPERFAMILY SSF52777 185 414 3.34E-89 T 23-04-2016 RR42_RS12935 74e72435030b28313f4986f6dc5993d9 415 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RR42_RS12935 74e72435030b28313f4986f6dc5993d9 415 Gene3D G3DSA:4.10.320.10 109 155 1.1E-14 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RR42_RS12935 74e72435030b28313f4986f6dc5993d9 415 PANTHER PTHR23151:SF47 3 162 1.4E-214 T 23-04-2016 RR42_RS12935 74e72435030b28313f4986f6dc5993d9 415 PANTHER PTHR23151:SF47 179 415 1.4E-214 T 23-04-2016 RR42_RS12935 74e72435030b28313f4986f6dc5993d9 415 PANTHER PTHR23151 3 162 1.4E-214 T 23-04-2016 RR42_RS12935 74e72435030b28313f4986f6dc5993d9 415 PANTHER PTHR23151 179 415 1.4E-214 T 23-04-2016 RR42_RS12935 74e72435030b28313f4986f6dc5993d9 415 Gene3D G3DSA:3.30.559.10 182 413 6.5E-92 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain RR42_RS12935 74e72435030b28313f4986f6dc5993d9 415 SUPERFAMILY SSF51230 2 97 2.22E-25 T 23-04-2016 IPR011053 Single hybrid motif RR42_RS12935 74e72435030b28313f4986f6dc5993d9 415 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 185 413 1.9E-80 T 23-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 RR42_RS04075 85b1d6cd0a171d088eb63f660b50a696 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 2.1E-35 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RR42_RS04075 85b1d6cd0a171d088eb63f660b50a696 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 26.754 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RR42_RS04075 85b1d6cd0a171d088eb63f660b50a696 96 SMART SM00883 2 94 8.0E-57 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RR42_RS04075 85b1d6cd0a171d088eb63f660b50a696 96 Gene3D G3DSA:2.30.33.40 1 94 1.7E-38 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RR42_RS04075 85b1d6cd0a171d088eb63f660b50a696 96 PANTHER PTHR10772 1 94 1.9E-41 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RR42_RS04075 85b1d6cd0a171d088eb63f660b50a696 96 PRINTS PR00297 10kDa chaperonin signature 60 72 8.0E-34 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RR42_RS04075 85b1d6cd0a171d088eb63f660b50a696 96 PRINTS PR00297 10kDa chaperonin signature 81 94 8.0E-34 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RR42_RS04075 85b1d6cd0a171d088eb63f660b50a696 96 PRINTS PR00297 10kDa chaperonin signature 3 18 8.0E-34 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RR42_RS04075 85b1d6cd0a171d088eb63f660b50a696 96 PRINTS PR00297 10kDa chaperonin signature 25 46 8.0E-34 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RR42_RS04075 85b1d6cd0a171d088eb63f660b50a696 96 SUPERFAMILY SSF50129 1 95 2.12E-34 T 23-04-2016 IPR011032 GroES-like RR42_RS04075 85b1d6cd0a171d088eb63f660b50a696 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 23-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 SUPERFAMILY SSF55073 683 840 7.14E-48 T 23-04-2016 IPR029787 Nucleotide cyclase RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 Gene3D G3DSA:3.30.450.20 280 406 3.7E-27 T 23-04-2016 RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 SUPERFAMILY SSF55785 298 410 1.16E-25 T 23-04-2016 IPR000014 PAS domain RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 Gene3D G3DSA:3.30.70.270 680 842 8.9E-53 T 23-04-2016 RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 SMART SM00052 851 1098 1.9E-77 T 23-04-2016 IPR001633 EAL domain RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 Pfam PF00563 EAL domain 860 1093 3.2E-62 T 23-04-2016 IPR001633 EAL domain RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 SUPERFAMILY SSF55785 533 665 1.33E-17 T 23-04-2016 IPR000014 PAS domain RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 Gene3D G3DSA:3.30.450.20 534 665 2.2E-17 T 23-04-2016 RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 Pfam PF08448 PAS fold 554 668 2.0E-8 T 23-04-2016 IPR013656 PAS fold-4 RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 SMART SM00086 365 408 2.9E-9 T 23-04-2016 IPR001610 PAC motif RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 SMART SM00086 625 667 19.0 T 23-04-2016 IPR001610 PAC motif RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 SMART SM00086 494 536 1.9E-5 T 23-04-2016 IPR001610 PAC motif RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 SMART SM00267 667 839 1.1E-62 T 23-04-2016 IPR000160 GGDEF domain RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 SUPERFAMILY SSF141868 859 1102 1.16E-72 T 23-04-2016 IPR001633 EAL domain RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 Gene3D G3DSA:3.30.450.20 413 533 3.2E-24 T 23-04-2016 RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 PANTHER PTHR24423:SF477 1045 1060 1.1E-64 T 23-04-2016 RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 PANTHER PTHR24423:SF477 281 553 1.1E-64 T 23-04-2016 RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 290 415 2.3E-30 T 23-04-2016 IPR000014 PAS domain RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 545 674 4.7E-9 T 23-04-2016 IPR000014 PAS domain RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 674 838 4.9E-41 T 23-04-2016 IPR000160 GGDEF domain RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 Pfam PF00990 Diguanylate cyclase, GGDEF domain 678 835 7.3E-42 T 23-04-2016 IPR000160 GGDEF domain RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 Pfam PF05231 MASE1 13 275 6.0E-15 T 23-04-2016 IPR007895 MASE1 RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 PANTHER PTHR24423 1045 1060 1.1E-64 T 23-04-2016 RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 PANTHER PTHR24423 281 553 1.1E-64 T 23-04-2016 RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 Pfam PF08447 PAS fold 443 530 1.3E-16 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 Pfam PF08447 PAS fold 316 399 2.6E-13 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 SMART SM00091 292 358 5.5E-12 T 23-04-2016 IPR000014 PAS domain RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 SMART SM00091 420 488 22.0 T 23-04-2016 IPR000014 PAS domain RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 SMART SM00091 548 614 0.0029 T 23-04-2016 IPR000014 PAS domain RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 SUPERFAMILY SSF55785 405 534 5.76E-19 T 23-04-2016 IPR000014 PAS domain RR42_RS03995 e0a9cfce84f77ea0a36c46f1e061e6a0 1111 Gene3D G3DSA:3.20.20.450 854 1101 1.4E-78 T 23-04-2016 IPR001633 EAL domain RR42_RS10975 00cf7878f3d86c78b83c4c38ab27bd49 428 PANTHER PTHR11662:SF3 2 420 2.1E-149 T 23-04-2016 RR42_RS10975 00cf7878f3d86c78b83c4c38ab27bd49 428 Gene3D G3DSA:1.20.1250.20 11 214 5.1E-46 T 23-04-2016 RR42_RS10975 00cf7878f3d86c78b83c4c38ab27bd49 428 Gene3D G3DSA:1.20.1250.20 239 420 3.3E-20 T 23-04-2016 RR42_RS10975 00cf7878f3d86c78b83c4c38ab27bd49 428 Pfam PF07690 Major Facilitator Superfamily 21 387 5.4E-45 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS10975 00cf7878f3d86c78b83c4c38ab27bd49 428 SUPERFAMILY SSF103473 2 422 1.83E-84 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS10975 00cf7878f3d86c78b83c4c38ab27bd49 428 PANTHER PTHR11662 2 420 2.1E-149 T 23-04-2016 RR42_RS05385 b507c405d3608247ef9261e373d8b0fd 194 PANTHER PTHR31223 1 189 1.9E-90 T 23-04-2016 RR42_RS05385 b507c405d3608247ef9261e373d8b0fd 194 SUPERFAMILY SSF102405 2 178 1.68E-63 T 23-04-2016 RR42_RS05385 b507c405d3608247ef9261e373d8b0fd 194 Pfam PF03641 Possible lysine decarboxylase 46 176 1.1E-43 T 23-04-2016 IPR031100 LOG family RR42_RS05385 b507c405d3608247ef9261e373d8b0fd 194 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 178 1.2E-66 T 23-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RR42_RS05385 b507c405d3608247ef9261e373d8b0fd 194 PANTHER PTHR31223:SF0 1 189 1.9E-90 T 23-04-2016 RR42_RS05385 b507c405d3608247ef9261e373d8b0fd 194 Gene3D G3DSA:3.40.50.450 2 179 2.0E-76 T 23-04-2016 RR42_RS01025 8d3939c0224abb76928222f0b3219893 431 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 209 1.6E-56 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RR42_RS01025 8d3939c0224abb76928222f0b3219893 431 Gene3D G3DSA:3.30.1220.10 243 379 1.8E-17 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RR42_RS01025 8d3939c0224abb76928222f0b3219893 431 SMART SM00833 255 379 1.1E-51 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RR42_RS01025 8d3939c0224abb76928222f0b3219893 431 PANTHER PTHR13748:SF4 353 393 5.5E-191 T 23-04-2016 RR42_RS01025 8d3939c0224abb76928222f0b3219893 431 PANTHER PTHR13748:SF4 1 332 5.5E-191 T 23-04-2016 RR42_RS01025 8d3939c0224abb76928222f0b3219893 431 PANTHER PTHR13748 353 393 5.5E-191 T 23-04-2016 RR42_RS01025 8d3939c0224abb76928222f0b3219893 431 PANTHER PTHR13748 1 332 5.5E-191 T 23-04-2016 RR42_RS01025 8d3939c0224abb76928222f0b3219893 431 SUPERFAMILY SSF52540 3 299 3.9E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01025 8d3939c0224abb76928222f0b3219893 431 Gene3D G3DSA:3.40.50.300 3 228 1.6E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01025 8d3939c0224abb76928222f0b3219893 431 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 255 379 8.3E-30 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RR42_RS02370 997cd2db418f15297a4e21b97b549c87 160 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 60 2.7E-6 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS02370 997cd2db418f15297a4e21b97b549c87 160 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RR42_RS02370 997cd2db418f15297a4e21b97b549c87 160 Gene3D G3DSA:1.10.150.120 77 153 5.6E-36 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RR42_RS02370 997cd2db418f15297a4e21b97b549c87 160 PANTHER PTHR11908 1 148 1.3E-48 T 23-04-2016 RR42_RS02370 997cd2db418f15297a4e21b97b549c87 160 Pfam PF01799 [2Fe-2S] binding domain 75 147 2.9E-31 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RR42_RS02370 997cd2db418f15297a4e21b97b549c87 160 Gene3D G3DSA:3.10.20.30 4 76 4.8E-31 T 23-04-2016 IPR012675 Beta-grasp domain RR42_RS02370 997cd2db418f15297a4e21b97b549c87 160 SUPERFAMILY SSF47741 86 153 2.49E-32 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RR42_RS02370 997cd2db418f15297a4e21b97b549c87 160 SUPERFAMILY SSF54292 3 80 3.15E-25 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS17590 0b97f08da61995cf1b0f8b7bea813528 252 PANTHER PTHR30027:SF3 1 250 4.6E-74 T 23-04-2016 RR42_RS17590 0b97f08da61995cf1b0f8b7bea813528 252 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 12 250 3.9E-51 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RR42_RS17590 0b97f08da61995cf1b0f8b7bea813528 252 PIRSF PIRSF015601 1 251 1.0E-55 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RR42_RS17590 0b97f08da61995cf1b0f8b7bea813528 252 SUPERFAMILY SSF88697 2 67 3.48E-13 T 23-04-2016 IPR015947 PUA-like domain RR42_RS17590 0b97f08da61995cf1b0f8b7bea813528 252 Pfam PF04452 RNA methyltransferase 19 246 1.1E-65 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RR42_RS17590 0b97f08da61995cf1b0f8b7bea813528 252 Gene3D G3DSA:3.40.1280.10 3 250 1.2E-77 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RR42_RS17590 0b97f08da61995cf1b0f8b7bea813528 252 SUPERFAMILY SSF75217 72 250 1.36E-48 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases RR42_RS17590 0b97f08da61995cf1b0f8b7bea813528 252 PANTHER PTHR30027 1 250 4.6E-74 T 23-04-2016 RR42_RS12850 1d59462e561f8c72f7c17683832b4da8 491 SUPERFAMILY SSF54814 202 280 3.34E-27 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RR42_RS12850 1d59462e561f8c72f7c17683832b4da8 491 Pfam PF14520 Helix-hairpin-helix domain 432 487 4.3E-9 T 23-04-2016 RR42_RS12850 1d59462e561f8c72f7c17683832b4da8 491 Gene3D G3DSA:3.30.300.20 201 279 4.1E-31 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta RR42_RS12850 1d59462e561f8c72f7c17683832b4da8 491 SUPERFAMILY SSF47794 359 418 5.18E-16 T 23-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 RR42_RS12850 1d59462e561f8c72f7c17683832b4da8 491 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 6 344 3.2E-122 T 23-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 RR42_RS12850 1d59462e561f8c72f7c17683832b4da8 491 PANTHER PTHR22648 1 448 4.1E-158 T 23-04-2016 RR42_RS12850 1d59462e561f8c72f7c17683832b4da8 491 SUPERFAMILY SSF54814 281 344 2.29E-15 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RR42_RS12850 1d59462e561f8c72f7c17683832b4da8 491 Pfam PF08529 NusA N-terminal domain 4 127 3.7E-36 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RR42_RS12850 1d59462e561f8c72f7c17683832b4da8 491 Gene3D G3DSA:1.10.150.20 357 422 2.3E-23 T 23-04-2016 RR42_RS12850 1d59462e561f8c72f7c17683832b4da8 491 Gene3D G3DSA:1.10.150.20 428 490 1.1E-20 T 23-04-2016 RR42_RS12850 1d59462e561f8c72f7c17683832b4da8 491 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 412 29.154 T 23-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 RR42_RS12850 1d59462e561f8c72f7c17683832b4da8 491 SMART SM00316 136 202 8.6E-10 T 23-04-2016 IPR022967 RNA-binding domain, S1 RR42_RS12850 1d59462e561f8c72f7c17683832b4da8 491 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 367 416 2.9E-20 T 23-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication RR42_RS12850 1d59462e561f8c72f7c17683832b4da8 491 PANTHER PTHR22648:SF0 1 448 4.1E-158 T 23-04-2016 RR42_RS12850 1d59462e561f8c72f7c17683832b4da8 491 Gene3D G3DSA:3.30.300.20 280 348 1.9E-29 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta RR42_RS12850 1d59462e561f8c72f7c17683832b4da8 491 SMART SM00322 303 376 0.0019 T 23-04-2016 IPR004087 K Homology domain GO:0003676 RR42_RS12850 1d59462e561f8c72f7c17683832b4da8 491 SUPERFAMILY SSF50249 135 201 2.69E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS12850 1d59462e561f8c72f7c17683832b4da8 491 SUPERFAMILY SSF47794 429 490 1.24E-13 T 23-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 RR42_RS12850 1d59462e561f8c72f7c17683832b4da8 491 Gene3D G3DSA:2.40.50.140 139 200 4.7E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS12850 1d59462e561f8c72f7c17683832b4da8 491 Pfam PF00575 S1 RNA binding domain 139 198 2.3E-8 T 23-04-2016 IPR003029 S1 domain GO:0003676 RR42_RS12850 1d59462e561f8c72f7c17683832b4da8 491 SUPERFAMILY SSF69705 1 129 4.71E-39 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RR42_RS12850 1d59462e561f8c72f7c17683832b4da8 491 Pfam PF13184 NusA-like KH domain 232 299 3.8E-24 T 23-04-2016 IPR025249 KH domain, NusA-like GO:0003723 RR42_RS12850 1d59462e561f8c72f7c17683832b4da8 491 Gene3D G3DSA:3.30.1480.10 1 128 2.2E-43 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RR42_RS14320 62bb0d7f283da442ddcc6028c3f76f2a 401 PIRSF PIRSF001434 4 401 1.0E-126 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RR42_RS14320 62bb0d7f283da442ddcc6028c3f76f2a 401 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 13 399 4.9E-138 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RR42_RS14320 62bb0d7f283da442ddcc6028c3f76f2a 401 Gene3D G3DSA:3.40.640.10 12 260 2.2E-89 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS14320 62bb0d7f283da442ddcc6028c3f76f2a 401 PANTHER PTHR11808 7 400 2.5E-202 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RR42_RS14320 62bb0d7f283da442ddcc6028c3f76f2a 401 Gene3D G3DSA:3.90.1150.10 262 400 7.2E-47 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS14320 62bb0d7f283da442ddcc6028c3f76f2a 401 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 13 399 4.5E-182 T 23-04-2016 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 UniPathway: UPA00051 RR42_RS14320 62bb0d7f283da442ddcc6028c3f76f2a 401 SUPERFAMILY SSF53383 33 400 6.92E-118 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS14320 62bb0d7f283da442ddcc6028c3f76f2a 401 PANTHER PTHR11808:SF36 7 400 2.5E-202 T 23-04-2016 RR42_RS07850 e98ed85b00e51ecd16cdda9e42c22d15 268 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 118 125 - T 23-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 RR42_RS07850 e98ed85b00e51ecd16cdda9e42c22d15 268 PANTHER PTHR32125 17 263 3.5E-56 T 23-04-2016 RR42_RS07850 e98ed85b00e51ecd16cdda9e42c22d15 268 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 14 264 30.212 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 RR42_RS07850 e98ed85b00e51ecd16cdda9e42c22d15 268 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 17 261 3.5E-58 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 RR42_RS07850 e98ed85b00e51ecd16cdda9e42c22d15 268 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 17 262 1.1E-54 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 RR42_RS07850 e98ed85b00e51ecd16cdda9e42c22d15 268 PANTHER PTHR32125:SF4 17 263 3.5E-56 T 23-04-2016 RR42_RS07850 e98ed85b00e51ecd16cdda9e42c22d15 268 SUPERFAMILY SSF53448 16 262 4.51E-52 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RR42_RS07850 e98ed85b00e51ecd16cdda9e42c22d15 268 Gene3D G3DSA:3.90.550.10 16 262 9.5E-63 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RR42_RS12050 d1ee70b1fae35e0b913df0ad7fffce20 317 PANTHER PTHR33693 52 317 1.9E-76 T 23-04-2016 RR42_RS12050 d1ee70b1fae35e0b913df0ad7fffce20 317 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 143 304 9.7E-65 T 23-04-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain RR42_RS12050 d1ee70b1fae35e0b913df0ad7fffce20 317 Gene3D G3DSA:3.40.470.10 132 311 3.4E-73 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RR42_RS12050 d1ee70b1fae35e0b913df0ad7fffce20 317 PANTHER PTHR33693:SF1 52 317 1.9E-76 T 23-04-2016 RR42_RS12050 d1ee70b1fae35e0b913df0ad7fffce20 317 SMART SM00987 157 304 2.1E-45 T 23-04-2016 RR42_RS12050 d1ee70b1fae35e0b913df0ad7fffce20 317 SMART SM00986 157 304 2.1E-45 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RR42_RS12050 d1ee70b1fae35e0b913df0ad7fffce20 317 SUPERFAMILY SSF52141 132 308 6.21E-65 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RR42_RS12050 d1ee70b1fae35e0b913df0ad7fffce20 317 Pfam PF03167 Uracil DNA glycosylase superfamily 157 303 2.0E-46 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RR42_RS01400 9e74b5f8c8afd5d6d77a2417a81c9d45 183 PANTHER PTHR23407 3 182 7.1E-29 T 23-04-2016 RR42_RS01400 9e74b5f8c8afd5d6d77a2417a81c9d45 183 PIRSF PIRSF006806 2 182 1.6E-22 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RR42_RS01400 9e74b5f8c8afd5d6d77a2417a81c9d45 183 SUPERFAMILY SSF100950 3 183 1.34E-40 T 23-04-2016 RR42_RS01400 9e74b5f8c8afd5d6d77a2417a81c9d45 183 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 4 179 4.9E-22 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RR42_RS01400 9e74b5f8c8afd5d6d77a2417a81c9d45 183 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 3 179 1.8E-33 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RR42_RS01400 9e74b5f8c8afd5d6d77a2417a81c9d45 183 PANTHER PTHR23407:SF1 3 182 7.1E-29 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RR42_RS01400 9e74b5f8c8afd5d6d77a2417a81c9d45 183 Gene3D G3DSA:3.40.50.10420 3 182 7.8E-39 T 23-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RR42_RS00240 65f8210c4739d25e0c3f247e29da7570 111 PIRSF PIRSF029826 2 110 1.4E-39 T 23-04-2016 IPR011394 NTP Pyrophosphohydrolase MazG-related, RS21-C6 RR42_RS00240 65f8210c4739d25e0c3f247e29da7570 111 Gene3D G3DSA:1.10.287.1080 3 97 3.3E-24 T 23-04-2016 RR42_RS00240 65f8210c4739d25e0c3f247e29da7570 111 PANTHER PTHR14552 5 106 1.0E-33 T 23-04-2016 RR42_RS00240 65f8210c4739d25e0c3f247e29da7570 111 SUPERFAMILY SSF101386 1 107 3.2E-34 T 23-04-2016 RR42_RS00240 65f8210c4739d25e0c3f247e29da7570 111 Pfam PF12643 MazG-like family 34 107 6.5E-13 T 23-04-2016 IPR025984 MazG-like domain KEGG: 00240+3.6.1.12 RR42_RS13745 56574354fa8c7dbc085f1739cff6aae0 290 Gene3D G3DSA:3.40.190.10 210 246 9.4E-6 T 23-04-2016 RR42_RS13745 56574354fa8c7dbc085f1739cff6aae0 290 PANTHER PTHR30537:SF3 1 288 1.6E-49 T 23-04-2016 RR42_RS13745 56574354fa8c7dbc085f1739cff6aae0 290 SUPERFAMILY SSF53850 93 289 2.71E-28 T 23-04-2016 RR42_RS13745 56574354fa8c7dbc085f1739cff6aae0 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.6E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS13745 56574354fa8c7dbc085f1739cff6aae0 290 Pfam PF03466 LysR substrate binding domain 92 285 1.3E-26 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS13745 56574354fa8c7dbc085f1739cff6aae0 290 SUPERFAMILY SSF46785 5 115 7.62E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS13745 56574354fa8c7dbc085f1739cff6aae0 290 Gene3D G3DSA:1.10.10.10 7 90 3.1E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS13745 56574354fa8c7dbc085f1739cff6aae0 290 PANTHER PTHR30537 1 288 1.6E-49 T 23-04-2016 RR42_RS13745 56574354fa8c7dbc085f1739cff6aae0 290 Gene3D G3DSA:3.40.190.10 96 172 3.3E-13 T 23-04-2016 RR42_RS07980 3fa2a253871416d998a8e83b5fb923b6 443 Gene3D G3DSA:1.20.1250.20 243 438 7.5E-25 T 23-04-2016 RR42_RS07980 3fa2a253871416d998a8e83b5fb923b6 443 Gene3D G3DSA:1.20.1250.20 26 229 2.0E-46 T 23-04-2016 RR42_RS07980 3fa2a253871416d998a8e83b5fb923b6 443 SUPERFAMILY SSF103473 19 436 1.57E-84 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS07980 3fa2a253871416d998a8e83b5fb923b6 443 PANTHER PTHR11662:SF3 20 436 3.6E-143 T 23-04-2016 RR42_RS07980 3fa2a253871416d998a8e83b5fb923b6 443 Pfam PF07690 Major Facilitator Superfamily 38 400 9.5E-49 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS07980 3fa2a253871416d998a8e83b5fb923b6 443 PANTHER PTHR11662 20 436 3.6E-143 T 23-04-2016 RR42_RS09605 90836635b66ba0174a484780803424ef 278 PRINTS PR01438 Universal stress protein signature 256 278 7.1E-6 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS09605 90836635b66ba0174a484780803424ef 278 PRINTS PR01438 Universal stress protein signature 3 21 7.1E-6 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS09605 90836635b66ba0174a484780803424ef 278 PRINTS PR01438 Universal stress protein signature 238 250 7.1E-6 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS09605 90836635b66ba0174a484780803424ef 278 Gene3D G3DSA:3.40.50.620 143 278 4.9E-19 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS09605 90836635b66ba0174a484780803424ef 278 Gene3D G3DSA:3.40.50.620 1 142 2.1E-8 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS09605 90836635b66ba0174a484780803424ef 278 SUPERFAMILY SSF52402 1 146 1.84E-12 T 23-04-2016 RR42_RS09605 90836635b66ba0174a484780803424ef 278 SUPERFAMILY SSF52402 156 276 3.43E-19 T 23-04-2016 RR42_RS09605 90836635b66ba0174a484780803424ef 278 Pfam PF00582 Universal stress protein family 3 146 5.9E-7 T 23-04-2016 IPR006016 UspA GO:0006950 RR42_RS09605 90836635b66ba0174a484780803424ef 278 Pfam PF00582 Universal stress protein family 157 276 7.5E-10 T 23-04-2016 IPR006016 UspA GO:0006950 RR42_RS18855 656e334db85470d326209a73ece0291b 169 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 3 69 6.9E-19 T 23-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 RR42_RS18855 656e334db85470d326209a73ece0291b 169 PANTHER PTHR33162 1 69 3.1E-15 T 23-04-2016 RR42_RS18855 656e334db85470d326209a73ece0291b 169 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 163 15.859 T 23-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 RR42_RS18855 656e334db85470d326209a73ece0291b 169 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.4E-14 T 23-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 RR42_RS18855 656e334db85470d326209a73ece0291b 169 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.4E-14 T 23-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 RR42_RS18855 656e334db85470d326209a73ece0291b 169 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.4E-14 T 23-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 RR42_RS18855 656e334db85470d326209a73ece0291b 169 Pfam PF02416 mttA/Hcf106 family 4 34 8.1E-7 T 23-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 RR42_RS18855 656e334db85470d326209a73ece0291b 169 PANTHER PTHR33162:SF4 1 69 3.1E-15 T 23-04-2016 RR42_RS18575 8057326e06558a57496c3822b9f11205 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS18575 8057326e06558a57496c3822b9f11205 555 Pfam PF00005 ABC transporter 340 473 8.5E-24 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS18575 8057326e06558a57496c3822b9f11205 555 Pfam PF00005 ABC transporter 22 191 4.9E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS18575 8057326e06558a57496c3822b9f11205 555 Gene3D G3DSA:3.40.50.300 321 535 5.7E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18575 8057326e06558a57496c3822b9f11205 555 PANTHER PTHR19211:SF7 1 555 0.0 T 23-04-2016 RR42_RS18575 8057326e06558a57496c3822b9f11205 555 Gene3D G3DSA:3.40.50.300 141 288 3.0E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18575 8057326e06558a57496c3822b9f11205 555 Gene3D G3DSA:3.40.50.300 12 105 3.0E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18575 8057326e06558a57496c3822b9f11205 555 SUPERFAMILY SSF52540 301 523 5.25E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18575 8057326e06558a57496c3822b9f11205 555 SUPERFAMILY SSF52540 12 236 5.58E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18575 8057326e06558a57496c3822b9f11205 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 9.1E-295 T 23-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD RR42_RS18575 8057326e06558a57496c3822b9f11205 555 SMART SM00382 31 236 8.7E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS18575 8057326e06558a57496c3822b9f11205 555 SMART SM00382 348 526 1.7E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS18575 8057326e06558a57496c3822b9f11205 555 Pfam PF12848 ABC transporter 230 306 6.4E-12 T 23-04-2016 IPR032781 ABC-transporter extension domain RR42_RS18575 8057326e06558a57496c3822b9f11205 555 PANTHER PTHR19211 1 555 0.0 T 23-04-2016 RR42_RS05405 a53d57254e6a2aca4fc3eced6cdd4d74 338 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 86 298 2.5E-11 T 23-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type RR42_RS05405 a53d57254e6a2aca4fc3eced6cdd4d74 338 PANTHER PTHR34990 69 320 6.6E-125 T 23-04-2016 RR42_RS05405 a53d57254e6a2aca4fc3eced6cdd4d74 338 Gene3D G3DSA:3.60.21.10 267 319 1.6E-32 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS05405 a53d57254e6a2aca4fc3eced6cdd4d74 338 Gene3D G3DSA:3.60.21.10 84 222 1.6E-32 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS05405 a53d57254e6a2aca4fc3eced6cdd4d74 338 SUPERFAMILY SSF56300 260 325 5.12E-35 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS05405 a53d57254e6a2aca4fc3eced6cdd4d74 338 SUPERFAMILY SSF56300 84 201 5.12E-35 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS05405 a53d57254e6a2aca4fc3eced6cdd4d74 338 PANTHER PTHR34990:SF2 69 320 6.6E-125 T 23-04-2016 RR42_RS12285 9a6a973ab94644a943c853e45a46fa24 269 PANTHER PTHR30151 19 267 2.7E-151 T 23-04-2016 RR42_RS12285 9a6a973ab94644a943c853e45a46fa24 269 Gene3D G3DSA:1.10.3720.10 64 259 3.8E-29 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS12285 9a6a973ab94644a943c853e45a46fa24 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 257 1.4E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS12285 9a6a973ab94644a943c853e45a46fa24 269 SUPERFAMILY SSF161098 66 249 8.63E-36 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS12285 9a6a973ab94644a943c853e45a46fa24 269 PANTHER PTHR30151:SF22 19 267 2.7E-151 T 23-04-2016 RR42_RS15440 418e8a54f48bfd20d0ea9f413b86ddea 371 Pfam PF04143 Sulphur transport 30 358 3.0E-63 T 23-04-2016 IPR007272 Sulphur transport domain RR42_RS15440 418e8a54f48bfd20d0ea9f413b86ddea 371 PANTHER PTHR30574:SF1 3 358 5.0E-43 T 23-04-2016 RR42_RS15440 418e8a54f48bfd20d0ea9f413b86ddea 371 PANTHER PTHR30574 3 358 5.0E-43 T 23-04-2016 RR42_RS15290 ba1a09f483466e39f06f214d0da27213 129 PANTHER PTHR40943 8 127 5.0E-28 T 23-04-2016 RR42_RS15290 ba1a09f483466e39f06f214d0da27213 129 Gene3D G3DSA:2.60.120.10 21 122 3.1E-34 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS15290 ba1a09f483466e39f06f214d0da27213 129 SUPERFAMILY SSF51182 19 121 1.28E-21 T 23-04-2016 IPR011051 RmlC-like cupin domain RR42_RS15290 ba1a09f483466e39f06f214d0da27213 129 Pfam PF05899 Protein of unknown function (DUF861) 46 118 1.9E-20 T 23-04-2016 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 RR42_RS17065 47f05f8d3d5cb67feeb3ccfc84676ec5 335 SUPERFAMILY SSF52374 15 177 1.89E-37 T 23-04-2016 RR42_RS17065 47f05f8d3d5cb67feeb3ccfc84676ec5 335 Pfam PF01687 Riboflavin kinase 183 306 3.6E-35 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 RR42_RS17065 47f05f8d3d5cb67feeb3ccfc84676ec5 335 PANTHER PTHR22749:SF0 1 308 1.9E-115 T 23-04-2016 RR42_RS17065 47f05f8d3d5cb67feeb3ccfc84676ec5 335 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 17 74 8.0E-8 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RR42_RS17065 47f05f8d3d5cb67feeb3ccfc84676ec5 335 Pfam PF06574 FAD synthetase 11 165 2.0E-55 T 23-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 RR42_RS17065 47f05f8d3d5cb67feeb3ccfc84676ec5 335 Gene3D G3DSA:3.40.50.620 10 185 1.4E-66 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS17065 47f05f8d3d5cb67feeb3ccfc84676ec5 335 PANTHER PTHR22749 1 308 1.9E-115 T 23-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 RR42_RS17065 47f05f8d3d5cb67feeb3ccfc84676ec5 335 Gene3D G3DSA:2.40.30.30 187 307 9.9E-39 T 23-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 RR42_RS17065 47f05f8d3d5cb67feeb3ccfc84676ec5 335 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 17 306 2.6E-91 T 23-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 RR42_RS17065 47f05f8d3d5cb67feeb3ccfc84676ec5 335 PIRSF PIRSF004491 2 310 2.4E-99 T 23-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 RR42_RS17065 47f05f8d3d5cb67feeb3ccfc84676ec5 335 SMART SM00904 182 307 5.5E-55 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 RR42_RS17065 47f05f8d3d5cb67feeb3ccfc84676ec5 335 SUPERFAMILY SSF82114 173 307 6.54E-41 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 RR42_RS10135 78b7949b3dc360d927ec65ee993b1479 425 PRINTS PR00359 B-class P450 signature 374 385 2.2E-39 T 23-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RR42_RS10135 78b7949b3dc360d927ec65ee993b1479 425 PRINTS PR00359 B-class P450 signature 299 310 2.2E-39 T 23-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RR42_RS10135 78b7949b3dc360d927ec65ee993b1479 425 PRINTS PR00359 B-class P450 signature 316 343 2.2E-39 T 23-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RR42_RS10135 78b7949b3dc360d927ec65ee993b1479 425 PRINTS PR00359 B-class P450 signature 365 374 2.2E-39 T 23-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RR42_RS10135 78b7949b3dc360d927ec65ee993b1479 425 PRINTS PR00359 B-class P450 signature 344 359 2.2E-39 T 23-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RR42_RS10135 78b7949b3dc360d927ec65ee993b1479 425 PRINTS PR00359 B-class P450 signature 104 115 2.2E-39 T 23-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RR42_RS10135 78b7949b3dc360d927ec65ee993b1479 425 PRINTS PR00359 B-class P450 signature 150 166 2.2E-39 T 23-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RR42_RS10135 78b7949b3dc360d927ec65ee993b1479 425 PRINTS PR00359 B-class P450 signature 167 182 2.2E-39 T 23-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RR42_RS10135 78b7949b3dc360d927ec65ee993b1479 425 Pfam PF00067 Cytochrome P450 100 388 9.7E-22 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 RR42_RS10135 78b7949b3dc360d927ec65ee993b1479 425 SUPERFAMILY SSF48264 20 425 5.76E-89 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 RR42_RS10135 78b7949b3dc360d927ec65ee993b1479 425 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 367 376 - T 23-04-2016 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Reactome: REACT_13433 RR42_RS10135 78b7949b3dc360d927ec65ee993b1479 425 PANTHER PTHR11712 20 419 7.2E-85 T 23-04-2016 RR42_RS10135 78b7949b3dc360d927ec65ee993b1479 425 PRINTS PR00385 P450 superfamily signature 299 310 6.6E-5 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 RR42_RS10135 78b7949b3dc360d927ec65ee993b1479 425 PRINTS PR00385 P450 superfamily signature 365 374 6.6E-5 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 RR42_RS10135 78b7949b3dc360d927ec65ee993b1479 425 PRINTS PR00385 P450 superfamily signature 374 385 6.6E-5 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 RR42_RS10135 78b7949b3dc360d927ec65ee993b1479 425 PRINTS PR00385 P450 superfamily signature 264 281 6.6E-5 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 RR42_RS10135 78b7949b3dc360d927ec65ee993b1479 425 Gene3D G3DSA:1.10.630.10 18 423 6.8E-113 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 RR42_RS03750 9596735bb8b8ab24ac7330eef9464f1d 171 SUPERFAMILY SSF52833 15 160 1.68E-48 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS03750 9596735bb8b8ab24ac7330eef9464f1d 171 PANTHER PTHR10371 29 162 3.0E-46 T 23-04-2016 RR42_RS03750 9596735bb8b8ab24ac7330eef9464f1d 171 PIRSF PIRSF000216 2 169 8.8E-49 T 23-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 RR42_RS03750 9596735bb8b8ab24ac7330eef9464f1d 171 Gene3D G3DSA:3.40.30.10 81 159 8.9E-8 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS03750 9596735bb8b8ab24ac7330eef9464f1d 171 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 118 136 - T 23-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 RR42_RS03750 9596735bb8b8ab24ac7330eef9464f1d 171 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 18 160 3.9E-45 T 23-04-2016 RR42_RS08815 95650cef29e683646e4492b0277725b7 517 Gene3D G3DSA:3.30.70.20 165 195 2.4E-10 T 23-04-2016 RR42_RS08815 95650cef29e683646e4492b0277725b7 517 Gene3D G3DSA:3.30.70.20 10 26 2.4E-10 T 23-04-2016 RR42_RS08815 95650cef29e683646e4492b0277725b7 517 Gene3D G3DSA:3.30.70.20 236 358 1.4E-74 T 23-04-2016 RR42_RS08815 95650cef29e683646e4492b0277725b7 517 Gene3D G3DSA:3.30.70.20 436 465 1.4E-74 T 23-04-2016 RR42_RS08815 95650cef29e683646e4492b0277725b7 517 Gene3D G3DSA:1.10.3650.10 359 434 1.1E-29 T 23-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 RR42_RS08815 95650cef29e683646e4492b0277725b7 517 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 489 8.9E-288 T 23-04-2016 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 RR42_RS08815 95650cef29e683646e4492b0277725b7 517 PANTHER PTHR11938:SF8 1 31 6.3E-128 T 23-04-2016 RR42_RS08815 95650cef29e683646e4492b0277725b7 517 PANTHER PTHR11938:SF8 134 143 6.3E-128 T 23-04-2016 RR42_RS08815 95650cef29e683646e4492b0277725b7 517 PANTHER PTHR11938:SF8 170 300 6.3E-128 T 23-04-2016 RR42_RS08815 95650cef29e683646e4492b0277725b7 517 SUPERFAMILY SSF54862 1 492 3.14E-177 T 23-04-2016 RR42_RS08815 95650cef29e683646e4492b0277725b7 517 Pfam PF13247 4Fe-4S dicluster domain 175 271 6.9E-37 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RR42_RS08815 95650cef29e683646e4492b0277725b7 517 Gene3D G3DSA:3.30.70.20 196 235 4.8E-24 T 23-04-2016 RR42_RS08815 95650cef29e683646e4492b0277725b7 517 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 435 1.5E-29 T 23-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 RR42_RS08815 95650cef29e683646e4492b0277725b7 517 PANTHER PTHR11938 1 31 6.3E-128 T 23-04-2016 RR42_RS08815 95650cef29e683646e4492b0277725b7 517 PANTHER PTHR11938 134 143 6.3E-128 T 23-04-2016 RR42_RS08815 95650cef29e683646e4492b0277725b7 517 PANTHER PTHR11938 170 300 6.3E-128 T 23-04-2016 RR42_RS08510 cb855fdd8f00081c3c0feeee47a8ea5d 140 Gene3D G3DSA:1.10.260.40 6 69 2.0E-10 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS08510 cb855fdd8f00081c3c0feeee47a8ea5d 140 SUPERFAMILY SSF47413 5 66 5.35E-10 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS08510 cb855fdd8f00081c3c0feeee47a8ea5d 140 SMART SM00530 10 64 1.7E-4 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RR42_RS03300 3ccc962a18d8bd16d6c37130a8b7be51 496 PANTHER PTHR30203 1 487 8.0E-127 T 23-04-2016 RR42_RS03300 3ccc962a18d8bd16d6c37130a8b7be51 496 PANTHER PTHR30203:SF7 1 487 8.0E-127 T 23-04-2016 RR42_RS03300 3ccc962a18d8bd16d6c37130a8b7be51 496 Pfam PF02321 Outer membrane efflux protein 289 452 2.2E-23 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RR42_RS03300 3ccc962a18d8bd16d6c37130a8b7be51 496 Pfam PF02321 Outer membrane efflux protein 81 263 2.3E-29 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RR42_RS03300 3ccc962a18d8bd16d6c37130a8b7be51 496 SUPERFAMILY SSF56954 72 473 3.01E-109 T 23-04-2016 RR42_RS03300 3ccc962a18d8bd16d6c37130a8b7be51 496 SUPERFAMILY SSF56954 14 40 3.01E-109 T 23-04-2016 RR42_RS03300 3ccc962a18d8bd16d6c37130a8b7be51 496 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 20 472 1.3E-130 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RR42_RS03300 3ccc962a18d8bd16d6c37130a8b7be51 496 Gene3D G3DSA:1.20.1600.10 67 474 1.4E-110 T 23-04-2016 RR42_RS06250 a8c72e06acd1638cdd9417ed95f9110e 294 PANTHER PTHR12128 2 293 3.0E-136 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS06250 a8c72e06acd1638cdd9417ed95f9110e 294 SMART SM01130 3 291 6.2E-144 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS06250 a8c72e06acd1638cdd9417ed95f9110e 294 Pfam PF00701 Dihydrodipicolinate synthetase family 4 289 8.5E-103 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS06250 a8c72e06acd1638cdd9417ed95f9110e 294 Gene3D G3DSA:3.20.20.70 1 293 4.2E-121 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS06250 a8c72e06acd1638cdd9417ed95f9110e 294 PANTHER PTHR12128:SF34 2 293 3.0E-136 T 23-04-2016 RR42_RS06250 a8c72e06acd1638cdd9417ed95f9110e 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 23-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS06250 a8c72e06acd1638cdd9417ed95f9110e 294 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 3 289 67.145 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS06250 a8c72e06acd1638cdd9417ed95f9110e 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 1.2E-35 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS06250 a8c72e06acd1638cdd9417ed95f9110e 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 1.2E-35 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS06250 a8c72e06acd1638cdd9417ed95f9110e 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 1.2E-35 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS06250 a8c72e06acd1638cdd9417ed95f9110e 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 1.2E-35 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS06250 a8c72e06acd1638cdd9417ed95f9110e 294 PIRSF PIRSF001365 1 293 1.8E-95 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS06250 a8c72e06acd1638cdd9417ed95f9110e 294 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 6 288 1.1E-111 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS06250 a8c72e06acd1638cdd9417ed95f9110e 294 SUPERFAMILY SSF51569 2 293 8.9E-105 T 23-04-2016 RR42_RS06250 a8c72e06acd1638cdd9417ed95f9110e 294 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 40 57 - T 23-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS17925 9d4b92ff6a42f70fe02eeabcb9a23f85 573 Pfam PF04073 Aminoacyl-tRNA editing domain 257 380 3.9E-31 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RR42_RS17925 9d4b92ff6a42f70fe02eeabcb9a23f85 573 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 572 40.988 T 23-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RR42_RS17925 9d4b92ff6a42f70fe02eeabcb9a23f85 573 SUPERFAMILY SSF55826 218 391 3.14E-37 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RR42_RS17925 9d4b92ff6a42f70fe02eeabcb9a23f85 573 Gene3D G3DSA:3.30.930.10 12 234 7.5E-105 T 23-04-2016 RR42_RS17925 9d4b92ff6a42f70fe02eeabcb9a23f85 573 Gene3D G3DSA:3.30.930.10 390 472 7.5E-105 T 23-04-2016 RR42_RS17925 9d4b92ff6a42f70fe02eeabcb9a23f85 573 PANTHER PTHR11451:SF3 400 572 5.7E-148 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RR42_RS17925 9d4b92ff6a42f70fe02eeabcb9a23f85 573 PANTHER PTHR11451:SF3 4 244 5.7E-148 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RR42_RS17925 9d4b92ff6a42f70fe02eeabcb9a23f85 573 PIRSF PIRSF001535 1 573 1.4E-270 T 23-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RR42_RS17925 9d4b92ff6a42f70fe02eeabcb9a23f85 573 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.2E-18 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RR42_RS17925 9d4b92ff6a42f70fe02eeabcb9a23f85 573 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.2E-18 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RR42_RS17925 9d4b92ff6a42f70fe02eeabcb9a23f85 573 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.2E-18 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RR42_RS17925 9d4b92ff6a42f70fe02eeabcb9a23f85 573 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.2E-18 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RR42_RS17925 9d4b92ff6a42f70fe02eeabcb9a23f85 573 SUPERFAMILY SSF52954 465 572 4.42E-30 T 23-04-2016 IPR004154 Anticodon-binding RR42_RS17925 9d4b92ff6a42f70fe02eeabcb9a23f85 573 SUPERFAMILY SSF55681 10 237 2.19E-103 T 23-04-2016 RR42_RS17925 9d4b92ff6a42f70fe02eeabcb9a23f85 573 SUPERFAMILY SSF55681 408 479 2.19E-103 T 23-04-2016 RR42_RS17925 9d4b92ff6a42f70fe02eeabcb9a23f85 573 Gene3D G3DSA:3.40.50.800 473 571 2.4E-29 T 23-04-2016 IPR004154 Anticodon-binding RR42_RS17925 9d4b92ff6a42f70fe02eeabcb9a23f85 573 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 565 3.5E-225 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RR42_RS17925 9d4b92ff6a42f70fe02eeabcb9a23f85 573 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 460 6.6E-49 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS17925 9d4b92ff6a42f70fe02eeabcb9a23f85 573 PANTHER PTHR11451 400 572 5.7E-148 T 23-04-2016 RR42_RS17925 9d4b92ff6a42f70fe02eeabcb9a23f85 573 PANTHER PTHR11451 4 244 5.7E-148 T 23-04-2016 RR42_RS17925 9d4b92ff6a42f70fe02eeabcb9a23f85 573 Pfam PF03129 Anticodon binding domain 477 568 3.7E-17 T 23-04-2016 IPR004154 Anticodon-binding RR42_RS17925 9d4b92ff6a42f70fe02eeabcb9a23f85 573 Gene3D G3DSA:3.90.960.10 239 389 1.5E-34 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RR42_RS13425 3fa9bdd146f7c5c77586c4baa8353f6f 237 PANTHER PTHR37323:SF1 1 233 1.4E-70 T 23-04-2016 RR42_RS13425 3fa9bdd146f7c5c77586c4baa8353f6f 237 Gene3D G3DSA:3.40.630.30 3 202 4.7E-37 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS13425 3fa9bdd146f7c5c77586c4baa8353f6f 237 Pfam PF13444 Acetyltransferase (GNAT) domain 16 116 8.1E-35 T 23-04-2016 RR42_RS13425 3fa9bdd146f7c5c77586c4baa8353f6f 237 SUPERFAMILY SSF55729 2 206 1.18E-42 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS13425 3fa9bdd146f7c5c77586c4baa8353f6f 237 PANTHER PTHR37323 1 233 1.4E-70 T 23-04-2016 RR42_RS15170 0203d7d1f29766929990b3d7999cc5d3 576 Pfam PF03471 Transporter associated domain 494 566 4.2E-10 T 23-04-2016 IPR005170 Transporter-associated domain RR42_RS15170 0203d7d1f29766929990b3d7999cc5d3 576 Pfam PF00999 Sodium/hydrogen exchanger family 13 384 1.6E-45 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RR42_RS15170 0203d7d1f29766929990b3d7999cc5d3 576 PANTHER PTHR32507 1 576 1.9E-183 T 23-04-2016 RR42_RS15170 0203d7d1f29766929990b3d7999cc5d3 576 Gene3D G3DSA:3.30.465.10 496 565 8.1E-9 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RR42_RS15170 0203d7d1f29766929990b3d7999cc5d3 576 SMART SM01091 490 570 1.7E-9 T 23-04-2016 IPR005170 Transporter-associated domain RR42_RS15170 0203d7d1f29766929990b3d7999cc5d3 576 SUPERFAMILY SSF56176 494 567 8.18E-8 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RR42_RS15170 0203d7d1f29766929990b3d7999cc5d3 576 PANTHER PTHR32507:SF7 1 576 1.9E-183 T 23-04-2016 IPR030151 K(+)/H(+) antiporter NhaP GO:0005451|GO:0006813|GO:0016021 RR42_RS08850 92a0fd59de94a1ffec82d52d3ae787f8 591 Gene3D G3DSA:3.20.70.20 53 580 2.3E-192 T 23-04-2016 RR42_RS08850 92a0fd59de94a1ffec82d52d3ae787f8 591 PANTHER PTHR21075 14 580 1.7E-194 T 23-04-2016 RR42_RS08850 92a0fd59de94a1ffec82d52d3ae787f8 591 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 47 580 2.1E-134 T 23-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 RR42_RS08850 92a0fd59de94a1ffec82d52d3ae787f8 591 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 48 580 1.6E-169 T 23-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 RR42_RS08850 92a0fd59de94a1ffec82d52d3ae787f8 591 SUPERFAMILY SSF51998 48 580 3.02E-153 T 23-04-2016 RR42_RS34725 22894ea29a6543ccd301a240454227dd 200 Pfam PF04546 Sigma-70, non-essential region 3 146 6.9E-52 T 23-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS34725 22894ea29a6543ccd301a240454227dd 200 SUPERFAMILY SSF88946 15 200 6.28E-48 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS34725 22894ea29a6543ccd301a240454227dd 200 PANTHER PTHR30603 112 200 2.5E-17 T 23-04-2016 RR42_RS34725 22894ea29a6543ccd301a240454227dd 200 PANTHER PTHR30603:SF0 112 200 2.5E-17 T 23-04-2016 RR42_RS34725 22894ea29a6543ccd301a240454227dd 200 Gene3D G3DSA:1.10.601.10 5 200 7.0E-59 T 23-04-2016 RR42_RS15995 609c7f7215e997e133808cb0742ac788 723 Gene3D G3DSA:3.30.70.20 584 630 9.6E-13 T 23-04-2016 RR42_RS15995 609c7f7215e997e133808cb0742ac788 723 Pfam PF12838 4Fe-4S dicluster domain 340 386 1.8E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RR42_RS15995 609c7f7215e997e133808cb0742ac788 723 Gene3D G3DSA:3.30.70.20 252 273 4.2E-4 T 23-04-2016 RR42_RS15995 609c7f7215e997e133808cb0742ac788 723 Gene3D G3DSA:3.30.70.20 333 347 4.2E-4 T 23-04-2016 RR42_RS15995 609c7f7215e997e133808cb0742ac788 723 SUPERFAMILY SSF54862 214 393 9.06E-56 T 23-04-2016 RR42_RS15995 609c7f7215e997e133808cb0742ac788 723 SUPERFAMILY SSF54862 584 685 9.06E-56 T 23-04-2016 RR42_RS15995 609c7f7215e997e133808cb0742ac788 723 Gene3D G3DSA:3.30.70.20 214 251 5.1E-10 T 23-04-2016 RR42_RS15995 609c7f7215e997e133808cb0742ac788 723 Gene3D G3DSA:3.30.70.20 348 381 2.2E-14 T 23-04-2016 RR42_RS15995 609c7f7215e997e133808cb0742ac788 723 Pfam PF13187 4Fe-4S dicluster domain 591 638 3.2E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RR42_RS15995 609c7f7215e997e133808cb0742ac788 723 Pfam PF00037 4Fe-4S binding domain 214 235 1.3E-6 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RR42_RS15995 609c7f7215e997e133808cb0742ac788 723 PANTHER PTHR24960:SF43 268 407 3.1E-74 T 23-04-2016 RR42_RS15995 609c7f7215e997e133808cb0742ac788 723 PANTHER PTHR24960:SF43 584 715 3.1E-74 T 23-04-2016 RR42_RS15995 609c7f7215e997e133808cb0742ac788 723 Gene3D G3DSA:1.10.1060.10 631 667 3.4E-6 T 23-04-2016 RR42_RS15995 609c7f7215e997e133808cb0742ac788 723 Gene3D G3DSA:1.10.1060.10 382 408 4.6E-12 T 23-04-2016 RR42_RS15995 609c7f7215e997e133808cb0742ac788 723 Gene3D G3DSA:1.10.1060.10 520 521 4.6E-12 T 23-04-2016 RR42_RS15995 609c7f7215e997e133808cb0742ac788 723 PANTHER PTHR24960 268 407 3.1E-74 T 23-04-2016 RR42_RS15995 609c7f7215e997e133808cb0742ac788 723 PANTHER PTHR24960 584 715 3.1E-74 T 23-04-2016 RR42_RS15995 609c7f7215e997e133808cb0742ac788 723 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 372 383 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RR42_RS15995 609c7f7215e997e133808cb0742ac788 723 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 592 603 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RR42_RS15995 609c7f7215e997e133808cb0742ac788 723 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 219 230 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RR42_RS15995 609c7f7215e997e133808cb0742ac788 723 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 623 634 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RR42_RS04780 56ffbc9837ad2571ffcd47540f1a76f2 97 Pfam PF06803 Protein of unknown function (DUF1232) 35 68 4.2E-12 T 23-04-2016 IPR010652 Protein of unknown function DUF1232 UniPathway: UPA00143 RR42_RS35610 733e9edb17d28647233896291e58ea8e 242 ProSitePatterns PS00163 Fumarate lyases signature. 177 186 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 RR42_RS35610 733e9edb17d28647233896291e58ea8e 242 TIGRFAM TIGR00838 argH: argininosuccinate lyase 1 241 5.8E-119 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RR42_RS35610 733e9edb17d28647233896291e58ea8e 242 PANTHER PTHR11444:SF3 1 242 7.0E-141 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RR42_RS35610 733e9edb17d28647233896291e58ea8e 242 SUPERFAMILY SSF48557 1 241 5.81E-95 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 RR42_RS35610 733e9edb17d28647233896291e58ea8e 242 PRINTS PR00149 Fumarate lyase superfamily signature 49 67 5.6E-31 T 23-04-2016 IPR000362 Fumarate lyase family RR42_RS35610 733e9edb17d28647233896291e58ea8e 242 PRINTS PR00149 Fumarate lyase superfamily signature 4 22 5.6E-31 T 23-04-2016 IPR000362 Fumarate lyase family RR42_RS35610 733e9edb17d28647233896291e58ea8e 242 PRINTS PR00149 Fumarate lyase superfamily signature 177 193 5.6E-31 T 23-04-2016 IPR000362 Fumarate lyase family RR42_RS35610 733e9edb17d28647233896291e58ea8e 242 PRINTS PR00149 Fumarate lyase superfamily signature 133 160 5.6E-31 T 23-04-2016 IPR000362 Fumarate lyase family RR42_RS35610 733e9edb17d28647233896291e58ea8e 242 Gene3D G3DSA:1.20.200.10 9 241 2.4E-95 T 23-04-2016 RR42_RS35610 733e9edb17d28647233896291e58ea8e 242 PRINTS PR00145 Argininosuccinate lyase family signature 95 111 2.1E-70 T 23-04-2016 RR42_RS35610 733e9edb17d28647233896291e58ea8e 242 PRINTS PR00145 Argininosuccinate lyase family signature 3 25 2.1E-70 T 23-04-2016 RR42_RS35610 733e9edb17d28647233896291e58ea8e 242 PRINTS PR00145 Argininosuccinate lyase family signature 44 64 2.1E-70 T 23-04-2016 RR42_RS35610 733e9edb17d28647233896291e58ea8e 242 PRINTS PR00145 Argininosuccinate lyase family signature 133 157 2.1E-70 T 23-04-2016 RR42_RS35610 733e9edb17d28647233896291e58ea8e 242 PRINTS PR00145 Argininosuccinate lyase family signature 177 193 2.1E-70 T 23-04-2016 RR42_RS35610 733e9edb17d28647233896291e58ea8e 242 PRINTS PR00145 Argininosuccinate lyase family signature 212 231 2.1E-70 T 23-04-2016 RR42_RS35610 733e9edb17d28647233896291e58ea8e 242 Pfam PF00206 Lyase 2 202 7.3E-66 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal RR42_RS35610 733e9edb17d28647233896291e58ea8e 242 PANTHER PTHR11444 1 242 7.0E-141 T 23-04-2016 IPR000362 Fumarate lyase family RR42_RS03225 fcf43911a829f6227888003a71f2c325 165 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 9 158 5.6E-60 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RR42_RS03225 fcf43911a829f6227888003a71f2c325 165 PANTHER PTHR23046 6 161 6.4E-74 T 23-04-2016 RR42_RS03225 fcf43911a829f6227888003a71f2c325 165 PIRSF PIRSF001338 4 162 3.2E-61 T 23-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 RR42_RS03225 fcf43911a829f6227888003a71f2c325 165 PANTHER PTHR23046:SF2 6 161 6.4E-74 T 23-04-2016 RR42_RS03225 fcf43911a829f6227888003a71f2c325 165 Pfam PF00731 AIR carboxylase 9 156 2.5E-60 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RR42_RS03225 fcf43911a829f6227888003a71f2c325 165 SMART SM01001 7 158 1.2E-94 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RR42_RS03225 fcf43911a829f6227888003a71f2c325 165 Gene3D G3DSA:3.40.50.7700 3 159 1.8E-69 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RR42_RS03225 fcf43911a829f6227888003a71f2c325 165 SUPERFAMILY SSF52255 8 161 8.11E-62 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RR42_RS03225 fcf43911a829f6227888003a71f2c325 165 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 9 162 30.114 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RR42_RS13655 d989eb08f1aaf7dddd601e3d83d65f17 332 Gene3D G3DSA:3.10.180.10 161 295 3.3E-35 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS13655 d989eb08f1aaf7dddd601e3d83d65f17 332 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 165 278 2.9E-13 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RR42_RS13655 d989eb08f1aaf7dddd601e3d83d65f17 332 SUPERFAMILY SSF54593 2 292 9.77E-34 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS13655 d989eb08f1aaf7dddd601e3d83d65f17 332 Gene3D G3DSA:3.10.180.10 7 147 2.3E-11 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS07345 82b0bb2dd1b7e366b9548e42f46807ee 283 Gene3D G3DSA:3.40.192.10 7 138 3.2E-51 T 23-04-2016 RR42_RS07345 82b0bb2dd1b7e366b9548e42f46807ee 283 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 6.5E-42 T 23-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RR42_RS07345 82b0bb2dd1b7e366b9548e42f46807ee 283 Gene3D G3DSA:3.40.50.720 139 263 1.9E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS07345 82b0bb2dd1b7e366b9548e42f46807ee 283 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 281 4.8E-69 T 23-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RR42_RS07345 82b0bb2dd1b7e366b9548e42f46807ee 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 3.5E-83 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RR42_RS07345 82b0bb2dd1b7e366b9548e42f46807ee 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 3.5E-83 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RR42_RS07345 82b0bb2dd1b7e366b9548e42f46807ee 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 3.5E-83 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RR42_RS07345 82b0bb2dd1b7e366b9548e42f46807ee 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 3.5E-83 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RR42_RS07345 82b0bb2dd1b7e366b9548e42f46807ee 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 3.5E-83 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RR42_RS07345 82b0bb2dd1b7e366b9548e42f46807ee 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 3.5E-83 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RR42_RS07345 82b0bb2dd1b7e366b9548e42f46807ee 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 3.5E-83 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RR42_RS07345 82b0bb2dd1b7e366b9548e42f46807ee 283 PANTHER PTHR10025 1 283 1.5E-164 T 23-04-2016 RR42_RS07345 82b0bb2dd1b7e366b9548e42f46807ee 283 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 23-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RR42_RS07345 82b0bb2dd1b7e366b9548e42f46807ee 283 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 38.599 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RR42_RS07345 82b0bb2dd1b7e366b9548e42f46807ee 283 SUPERFAMILY SSF53223 1 121 1.82E-40 T 23-04-2016 RR42_RS07345 82b0bb2dd1b7e366b9548e42f46807ee 283 SUPERFAMILY SSF51735 122 280 2.55E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS07345 82b0bb2dd1b7e366b9548e42f46807ee 283 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 259 267 - T 23-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RR42_RS02855 34ef7002af27320cb35e499807b3e150 450 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 2 448 72.165 T 23-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 RR42_RS02855 34ef7002af27320cb35e499807b3e150 450 Pfam PF04055 Radical SAM superfamily 150 324 3.0E-28 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RR42_RS02855 34ef7002af27320cb35e499807b3e150 450 PANTHER PTHR11918 1 450 6.8E-194 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein RR42_RS02855 34ef7002af27320cb35e499807b3e150 450 Pfam PF00919 Uncharacterized protein family UPF0004 3 103 5.0E-30 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 RR42_RS02855 34ef7002af27320cb35e499807b3e150 450 Pfam PF01938 TRAM domain 380 447 2.1E-14 T 23-04-2016 IPR002792 TRAM domain RR42_RS02855 34ef7002af27320cb35e499807b3e150 450 SMART SM00729 146 363 5.1E-54 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RR42_RS02855 34ef7002af27320cb35e499807b3e150 450 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 150 170 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 RR42_RS02855 34ef7002af27320cb35e499807b3e150 450 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 3 447 1.2E-171 T 23-04-2016 RR42_RS02855 34ef7002af27320cb35e499807b3e150 450 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 444 1.1E-143 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 RR42_RS02855 34ef7002af27320cb35e499807b3e150 450 SUPERFAMILY SSF102114 128 372 8.89E-59 T 23-04-2016 RR42_RS02855 34ef7002af27320cb35e499807b3e150 450 Gene3D G3DSA:3.80.30.20 145 376 1.4E-77 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RR42_RS02855 34ef7002af27320cb35e499807b3e150 450 PANTHER PTHR11918:SF43 1 450 6.8E-194 T 23-04-2016 RR42_RS07420 c21e30ddbfafe827f4a54d24c6c2e773 248 SUPERFAMILY SSF46785 4 74 3.87E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS07420 c21e30ddbfafe827f4a54d24c6c2e773 248 SMART SM00345 12 71 3.0E-14 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS07420 c21e30ddbfafe827f4a54d24c6c2e773 248 Pfam PF07729 FCD domain 96 220 1.4E-22 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS07420 c21e30ddbfafe827f4a54d24c6c2e773 248 Gene3D G3DSA:1.10.10.10 3 74 1.5E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS07420 c21e30ddbfafe827f4a54d24c6c2e773 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 71 6.5E-17 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS07420 c21e30ddbfafe827f4a54d24c6c2e773 248 PANTHER PTHR11751 5 111 1.1E-21 T 23-04-2016 RR42_RS07420 c21e30ddbfafe827f4a54d24c6c2e773 248 SUPERFAMILY SSF48008 91 226 6.28E-27 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS07420 c21e30ddbfafe827f4a54d24c6c2e773 248 Gene3D G3DSA:1.20.120.530 88 226 6.7E-28 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS07420 c21e30ddbfafe827f4a54d24c6c2e773 248 SMART SM00895 95 221 5.8E-22 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS13960 22589deb9ee1fc0c72aa0127b89e77f3 367 PANTHER PTHR30106:SF2 32 362 6.2E-84 T 23-04-2016 RR42_RS13960 22589deb9ee1fc0c72aa0127b89e77f3 367 PANTHER PTHR30106 32 362 6.2E-84 T 23-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 RR42_RS13960 22589deb9ee1fc0c72aa0127b89e77f3 367 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 30 362 3.5E-75 T 23-04-2016 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 RR42_RS13960 22589deb9ee1fc0c72aa0127b89e77f3 367 Pfam PF03601 Conserved hypothetical protein 698 29 348 1.2E-78 T 23-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 RR42_RS10790 38df2ec33080d8636ffc46a830b96c7b 501 PANTHER PTHR30177 229 493 4.8E-76 T 23-04-2016 RR42_RS10790 38df2ec33080d8636ffc46a830b96c7b 501 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 322 479 5.6E-24 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS10790 38df2ec33080d8636ffc46a830b96c7b 501 Gene3D G3DSA:3.40.190.120 121 216 3.2E-30 T 23-04-2016 RR42_RS10790 38df2ec33080d8636ffc46a830b96c7b 501 PANTHER PTHR30177:SF4 229 493 4.8E-76 T 23-04-2016 RR42_RS10790 38df2ec33080d8636ffc46a830b96c7b 501 SUPERFAMILY SSF53850 20 275 6.51E-53 T 23-04-2016 RR42_RS10790 38df2ec33080d8636ffc46a830b96c7b 501 SUPERFAMILY SSF161098 301 479 3.27E-37 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS10790 38df2ec33080d8636ffc46a830b96c7b 501 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 20 274 1.1E-51 T 23-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 RR42_RS10790 38df2ec33080d8636ffc46a830b96c7b 501 Gene3D G3DSA:3.40.190.10 18 120 1.2E-36 T 23-04-2016 RR42_RS10790 38df2ec33080d8636ffc46a830b96c7b 501 Gene3D G3DSA:3.40.190.10 229 275 1.2E-36 T 23-04-2016 RR42_RS10790 38df2ec33080d8636ffc46a830b96c7b 501 Gene3D G3DSA:1.10.3720.10 299 480 6.8E-36 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS17420 4bb910bc0fb6d0686f697a1fcdde73a5 335 SMART SM00448 12 129 8.0E-8 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS17420 4bb910bc0fb6d0686f697a1fcdde73a5 335 PANTHER PTHR26402:SF509 266 281 4.5E-16 T 23-04-2016 RR42_RS17420 4bb910bc0fb6d0686f697a1fcdde73a5 335 PANTHER PTHR26402:SF509 12 143 4.5E-16 T 23-04-2016 RR42_RS17420 4bb910bc0fb6d0686f697a1fcdde73a5 335 Pfam PF00072 Response regulator receiver domain 14 124 1.0E-10 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS17420 4bb910bc0fb6d0686f697a1fcdde73a5 335 PANTHER PTHR26402 266 281 4.5E-16 T 23-04-2016 RR42_RS17420 4bb910bc0fb6d0686f697a1fcdde73a5 335 PANTHER PTHR26402 12 143 4.5E-16 T 23-04-2016 RR42_RS17420 4bb910bc0fb6d0686f697a1fcdde73a5 335 SUPERFAMILY SSF52172 11 154 3.84E-21 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS17420 4bb910bc0fb6d0686f697a1fcdde73a5 335 Gene3D G3DSA:3.40.50.2300 13 140 4.9E-20 T 23-04-2016 RR42_RS18455 6fb8b0bd693706042e72e3698fe88e7a 255 PANTHER PTHR21234:SF16 1 253 2.7E-31 T 23-04-2016 RR42_RS18455 6fb8b0bd693706042e72e3698fe88e7a 255 Pfam PF01048 Phosphorylase superfamily 3 251 3.8E-46 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RR42_RS18455 6fb8b0bd693706042e72e3698fe88e7a 255 SUPERFAMILY SSF53167 1 248 3.27E-56 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RR42_RS18455 6fb8b0bd693706042e72e3698fe88e7a 255 Gene3D G3DSA:3.40.50.1580 1 129 9.6E-60 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RR42_RS18455 6fb8b0bd693706042e72e3698fe88e7a 255 Gene3D G3DSA:3.40.50.1580 161 253 9.6E-60 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RR42_RS18455 6fb8b0bd693706042e72e3698fe88e7a 255 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 3 246 1.3E-34 T 23-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 RR42_RS18455 6fb8b0bd693706042e72e3698fe88e7a 255 PANTHER PTHR21234 1 253 2.7E-31 T 23-04-2016 IPR018017 Nucleoside phosphorylase RR42_RS11180 f97538e5085aebdd6fb73682f4485320 264 SUPERFAMILY SSF54534 125 222 7.85E-30 T 23-04-2016 RR42_RS11180 f97538e5085aebdd6fb73682f4485320 264 PANTHER PTHR10657 109 264 1.1E-40 T 23-04-2016 RR42_RS11180 f97538e5085aebdd6fb73682f4485320 264 Gene3D G3DSA:3.10.50.40 122 241 6.1E-43 T 23-04-2016 RR42_RS11180 f97538e5085aebdd6fb73682f4485320 264 Pfam PF13616 PPIC-type PPIASE domain 130 220 2.3E-22 T 23-04-2016 RR42_RS11180 f97538e5085aebdd6fb73682f4485320 264 SUPERFAMILY SSF109998 25 158 1.86E-20 T 23-04-2016 IPR027304 Trigger factor/SurA domain RR42_RS11180 f97538e5085aebdd6fb73682f4485320 264 PANTHER PTHR10657:SF11 109 264 1.1E-40 T 23-04-2016 RR42_RS06260 2aa949b58e4beef22b7e9f0d4c409206 262 PANTHER PTHR13754:SF15 2 261 2.7E-57 T 23-04-2016 RR42_RS06260 2aa949b58e4beef22b7e9f0d4c409206 262 Pfam PF12706 Beta-lactamase superfamily domain 27 220 1.0E-17 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS06260 2aa949b58e4beef22b7e9f0d4c409206 262 SUPERFAMILY SSF56281 2 233 3.67E-40 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS06260 2aa949b58e4beef22b7e9f0d4c409206 262 SMART SM00849 12 171 2.1E-4 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS06260 2aa949b58e4beef22b7e9f0d4c409206 262 Gene3D G3DSA:3.60.15.10 1 237 8.0E-36 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS06260 2aa949b58e4beef22b7e9f0d4c409206 262 PANTHER PTHR13754 2 261 2.7E-57 T 23-04-2016 RR42_RS37420 cf7bc64538c4d98e839d17584d31af22 245 Gene3D G3DSA:1.10.260.30 126 229 6.2E-38 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RR42_RS37420 cf7bc64538c4d98e839d17584d31af22 245 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 66 79 - T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RR42_RS37420 cf7bc64538c4d98e839d17584d31af22 245 Pfam PF00448 SRP54-type protein, GTPase domain 1 93 2.2E-30 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RR42_RS37420 cf7bc64538c4d98e839d17584d31af22 245 Pfam PF02978 Signal peptide binding domain 126 225 2.6E-32 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RR42_RS37420 cf7bc64538c4d98e839d17584d31af22 245 PANTHER PTHR11564:SF7 1 233 8.5E-131 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 RR42_RS37420 cf7bc64538c4d98e839d17584d31af22 245 SUPERFAMILY SSF47446 95 228 2.13E-44 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RR42_RS37420 cf7bc64538c4d98e839d17584d31af22 245 Gene3D G3DSA:3.40.50.300 2 94 7.3E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS37420 cf7bc64538c4d98e839d17584d31af22 245 SMART SM00962 1 93 4.5E-13 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RR42_RS37420 cf7bc64538c4d98e839d17584d31af22 245 PANTHER PTHR11564 1 233 8.5E-131 T 23-04-2016 RR42_RS37420 cf7bc64538c4d98e839d17584d31af22 245 SUPERFAMILY SSF52540 5 95 8.93E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS16995 7972284965df3754bbddd7787eda7897 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 23-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site RR42_RS16995 7972284965df3754bbddd7787eda7897 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 1.0E-67 T 23-04-2016 IPR001405 RadC protein RR42_RS16995 7972284965df3754bbddd7787eda7897 224 PANTHER PTHR30471:SF5 1 224 5.7E-105 T 23-04-2016 RR42_RS16995 7972284965df3754bbddd7787eda7897 224 SUPERFAMILY SSF102712 155 201 6.15E-5 T 23-04-2016 RR42_RS16995 7972284965df3754bbddd7787eda7897 224 Gene3D G3DSA:1.10.150.20 47 78 1.1E-4 T 23-04-2016 RR42_RS16995 7972284965df3754bbddd7787eda7897 224 PANTHER PTHR30471 1 224 5.7E-105 T 23-04-2016 RR42_RS16995 7972284965df3754bbddd7787eda7897 224 Pfam PF04002 RadC-like JAB domain 104 222 6.1E-42 T 23-04-2016 IPR025657 RadC-like JAB domain RR42_RS16995 7972284965df3754bbddd7787eda7897 224 Gene3D G3DSA:3.40.140.10 103 223 5.2E-46 T 23-04-2016 RR42_RS16995 7972284965df3754bbddd7787eda7897 224 SUPERFAMILY SSF47781 17 87 5.78E-10 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RR42_RS10620 23d7f300428f9a02dab9c9d1404c20f2 276 Gene3D G3DSA:3.20.20.140 7 274 2.2E-77 T 23-04-2016 RR42_RS10620 23d7f300428f9a02dab9c9d1404c20f2 276 Pfam PF04909 Amidohydrolase 13 273 2.9E-32 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RR42_RS10620 23d7f300428f9a02dab9c9d1404c20f2 276 PANTHER PTHR35563 10 275 8.7E-58 T 23-04-2016 RR42_RS10620 23d7f300428f9a02dab9c9d1404c20f2 276 PANTHER PTHR35563:SF1 10 275 8.7E-58 T 23-04-2016 RR42_RS10620 23d7f300428f9a02dab9c9d1404c20f2 276 SUPERFAMILY SSF51556 10 273 7.85E-64 T 23-04-2016 IPR032466 Metal-dependent hydrolase RR42_RS15950 b4497e74110de9240b20bef6d0e2fa0e 276 SUPERFAMILY SSF53927 16 266 8.42E-70 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RR42_RS15950 b4497e74110de9240b20bef6d0e2fa0e 276 PANTHER PTHR30592:SF2 12 265 7.1E-110 T 23-04-2016 RR42_RS15950 b4497e74110de9240b20bef6d0e2fa0e 276 PIRSF PIRSF015626 6 270 3.1E-76 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 RR42_RS15950 b4497e74110de9240b20bef6d0e2fa0e 276 Pfam PF02634 FdhD/NarQ family 34 266 2.8E-78 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 RR42_RS15950 b4497e74110de9240b20bef6d0e2fa0e 276 Gene3D G3DSA:3.40.140.10 131 268 4.9E-52 T 23-04-2016 RR42_RS15950 b4497e74110de9240b20bef6d0e2fa0e 276 PANTHER PTHR30592 12 265 7.1E-110 T 23-04-2016 RR42_RS15950 b4497e74110de9240b20bef6d0e2fa0e 276 Gene3D G3DSA:3.10.20.10 35 117 4.2E-17 T 23-04-2016 RR42_RS03610 a31b7bd05597f9c57a359418242af6f0 344 SUPERFAMILY SSF53474 36 337 5.77E-58 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS03610 a31b7bd05597f9c57a359418242af6f0 344 Pfam PF00561 alpha/beta hydrolase fold 78 192 1.4E-16 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS03610 a31b7bd05597f9c57a359418242af6f0 344 PANTHER PTHR10992:SF771 1 285 3.7E-74 T 23-04-2016 RR42_RS03610 a31b7bd05597f9c57a359418242af6f0 344 PANTHER PTHR10992:SF771 302 339 3.7E-74 T 23-04-2016 RR42_RS03610 a31b7bd05597f9c57a359418242af6f0 344 PANTHER PTHR10992 1 285 3.7E-74 T 23-04-2016 RR42_RS03610 a31b7bd05597f9c57a359418242af6f0 344 PANTHER PTHR10992 302 339 3.7E-74 T 23-04-2016 RR42_RS03610 a31b7bd05597f9c57a359418242af6f0 344 PRINTS PR00111 Alpha/beta hydrolase fold signature 144 157 1.8E-12 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS03610 a31b7bd05597f9c57a359418242af6f0 344 PRINTS PR00111 Alpha/beta hydrolase fold signature 267 281 1.8E-12 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS03610 a31b7bd05597f9c57a359418242af6f0 344 PRINTS PR00111 Alpha/beta hydrolase fold signature 158 171 1.8E-12 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS03610 a31b7bd05597f9c57a359418242af6f0 344 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 114 1.8E-12 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS03610 a31b7bd05597f9c57a359418242af6f0 344 PRINTS PR00412 Epoxide hydrolase signature 99 114 5.6E-5 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS03610 a31b7bd05597f9c57a359418242af6f0 344 PRINTS PR00412 Epoxide hydrolase signature 158 171 5.6E-5 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS03610 a31b7bd05597f9c57a359418242af6f0 344 PRINTS PR00412 Epoxide hydrolase signature 265 281 5.6E-5 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS03610 a31b7bd05597f9c57a359418242af6f0 344 PRINTS PR00412 Epoxide hydrolase signature 144 157 5.6E-5 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS03610 a31b7bd05597f9c57a359418242af6f0 344 Gene3D G3DSA:3.40.50.1820 37 337 7.6E-77 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS17720 4d96891e49b39fb283fabeafe1ce36d7 315 Gene3D G3DSA:3.40.1190.20 3 308 2.2E-57 T 23-04-2016 IPR029056 Ribokinase-like RR42_RS17720 4d96891e49b39fb283fabeafe1ce36d7 315 SUPERFAMILY SSF53613 4 301 3.59E-65 T 23-04-2016 IPR029056 Ribokinase-like RR42_RS17720 4d96891e49b39fb283fabeafe1ce36d7 315 PANTHER PTHR10584 1 307 3.4E-96 T 23-04-2016 RR42_RS17720 4d96891e49b39fb283fabeafe1ce36d7 315 Pfam PF00294 pfkB family carbohydrate kinase 32 297 3.3E-42 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB RR42_RS17720 4d96891e49b39fb283fabeafe1ce36d7 315 PANTHER PTHR10584:SF15 1 307 3.4E-96 T 23-04-2016 RR42_RS17720 4d96891e49b39fb283fabeafe1ce36d7 315 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RR42_RS06090 7167fa80baa117ec7c10567ea719aa2f 565 Pfam PF01368 DHH family 75 200 3.6E-10 T 23-04-2016 IPR001667 DDH domain RR42_RS06090 7167fa80baa117ec7c10567ea719aa2f 565 Pfam PF02272 DHHA1 domain 380 448 6.7E-14 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 RR42_RS06090 7167fa80baa117ec7c10567ea719aa2f 565 PANTHER PTHR30255:SF2 20 565 3.6E-193 T 23-04-2016 RR42_RS06090 7167fa80baa117ec7c10567ea719aa2f 565 PANTHER PTHR30255 20 565 3.6E-193 T 23-04-2016 RR42_RS06090 7167fa80baa117ec7c10567ea719aa2f 565 SUPERFAMILY SSF64182 48 464 4.06E-119 T 23-04-2016 RR42_RS06090 7167fa80baa117ec7c10567ea719aa2f 565 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 563 1.2E-144 T 23-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 RR42_RS05800 1685522d9a36a8a86dd0b50a0c063e12 328 PIRSF PIRSF017082 1 327 7.0E-78 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS05800 1685522d9a36a8a86dd0b50a0c063e12 328 PANTHER PTHR30349:SF1 1 291 3.3E-87 T 23-04-2016 RR42_RS05800 1685522d9a36a8a86dd0b50a0c063e12 328 PANTHER PTHR30349 1 291 3.3E-87 T 23-04-2016 RR42_RS05800 1685522d9a36a8a86dd0b50a0c063e12 328 SUPERFAMILY SSF53850 125 292 5.43E-6 T 23-04-2016 RR42_RS05800 1685522d9a36a8a86dd0b50a0c063e12 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 322 4.1E-83 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS18550 16895824c2b27a3d3566906fe7cc9393 310 SUPERFAMILY SSF46785 1 110 7.79E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS18550 16895824c2b27a3d3566906fe7cc9393 310 Gene3D G3DSA:1.10.10.10 1 85 1.0E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS18550 16895824c2b27a3d3566906fe7cc9393 310 Gene3D G3DSA:3.40.190.10 91 176 2.0E-20 T 23-04-2016 RR42_RS18550 16895824c2b27a3d3566906fe7cc9393 310 SUPERFAMILY SSF53850 89 295 1.01E-41 T 23-04-2016 RR42_RS18550 16895824c2b27a3d3566906fe7cc9393 310 Pfam PF03466 LysR substrate binding domain 88 292 1.1E-38 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS18550 16895824c2b27a3d3566906fe7cc9393 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 7.1E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS18550 16895824c2b27a3d3566906fe7cc9393 310 Gene3D G3DSA:3.40.190.10 177 259 4.4E-17 T 23-04-2016 RR42_RS18550 16895824c2b27a3d3566906fe7cc9393 310 PANTHER PTHR30537 1 293 6.4E-90 T 23-04-2016 RR42_RS18550 16895824c2b27a3d3566906fe7cc9393 310 PANTHER PTHR30537:SF5 1 293 6.4E-90 T 23-04-2016 RR42_RS11265 3eca83dc2a6f022ff9ce04d0bad32302 385 ProSitePatterns PS00480 Citrate synthase signature. 267 279 - T 23-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 RR42_RS11265 3eca83dc2a6f022ff9ce04d0bad32302 385 PANTHER PTHR11739 18 384 4.0E-147 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS11265 3eca83dc2a6f022ff9ce04d0bad32302 385 PIRSF PIRSF001369 11 385 2.3E-108 T 23-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 RR42_RS11265 3eca83dc2a6f022ff9ce04d0bad32302 385 Pfam PF00285 Citrate synthase, C-terminal domain 18 366 3.4E-109 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS11265 3eca83dc2a6f022ff9ce04d0bad32302 385 PANTHER PTHR11739:SF4 18 384 4.0E-147 T 23-04-2016 RR42_RS11265 3eca83dc2a6f022ff9ce04d0bad32302 385 SUPERFAMILY SSF48256 18 377 7.98E-120 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS11265 3eca83dc2a6f022ff9ce04d0bad32302 385 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 17 384 2.6E-153 T 23-04-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 RR42_RS11265 3eca83dc2a6f022ff9ce04d0bad32302 385 Gene3D G3DSA:1.10.580.10 23 245 1.8E-72 T 23-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 RR42_RS11265 3eca83dc2a6f022ff9ce04d0bad32302 385 Gene3D G3DSA:1.10.230.10 246 331 1.2E-27 T 23-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain RR42_RS11265 3eca83dc2a6f022ff9ce04d0bad32302 385 PRINTS PR00143 Citrate synthase signature 207 235 6.3E-36 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS11265 3eca83dc2a6f022ff9ce04d0bad32302 385 PRINTS PR00143 Citrate synthase signature 317 333 6.3E-36 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS11265 3eca83dc2a6f022ff9ce04d0bad32302 385 PRINTS PR00143 Citrate synthase signature 185 200 6.3E-36 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS11265 3eca83dc2a6f022ff9ce04d0bad32302 385 PRINTS PR00143 Citrate synthase signature 337 351 6.3E-36 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS11265 3eca83dc2a6f022ff9ce04d0bad32302 385 PRINTS PR00143 Citrate synthase signature 260 280 6.3E-36 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS11265 3eca83dc2a6f022ff9ce04d0bad32302 385 PRINTS PR00143 Citrate synthase signature 135 148 6.3E-36 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS07955 3f492ef13ec341e1c86770740a4a2741 415 PANTHER PTHR32494:SF6 8 414 5.7E-187 T 23-04-2016 RR42_RS07955 3f492ef13ec341e1c86770740a4a2741 415 Pfam PF01546 Peptidase family M20/M25/M40 83 411 1.4E-35 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RR42_RS07955 3f492ef13ec341e1c86770740a4a2741 415 SUPERFAMILY SSF55031 218 333 6.54E-28 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS07955 3f492ef13ec341e1c86770740a4a2741 415 Pfam PF07687 Peptidase dimerisation domain 218 315 3.5E-5 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS07955 3f492ef13ec341e1c86770740a4a2741 415 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 13 413 8.1E-132 T 23-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 RR42_RS07955 3f492ef13ec341e1c86770740a4a2741 415 Gene3D G3DSA:3.30.70.360 231 333 1.9E-38 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS07955 3f492ef13ec341e1c86770740a4a2741 415 PANTHER PTHR32494 8 414 5.7E-187 T 23-04-2016 RR42_RS07955 3f492ef13ec341e1c86770740a4a2741 415 Gene3D G3DSA:3.40.630.10 7 230 2.2E-114 T 23-04-2016 RR42_RS07955 3f492ef13ec341e1c86770740a4a2741 415 Gene3D G3DSA:3.40.630.10 356 414 2.2E-114 T 23-04-2016 RR42_RS07955 3f492ef13ec341e1c86770740a4a2741 415 PIRSF PIRSF001235 7 415 2.3E-136 T 23-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 RR42_RS07955 3f492ef13ec341e1c86770740a4a2741 415 SUPERFAMILY SSF53187 341 414 1.94E-97 T 23-04-2016 RR42_RS07955 3f492ef13ec341e1c86770740a4a2741 415 SUPERFAMILY SSF53187 4 228 1.94E-97 T 23-04-2016 RR42_RS11935 9a0ae8ac86a49602f3068e46f883ad38 275 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 274 57.108 T 23-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RR42_RS11935 9a0ae8ac86a49602f3068e46f883ad38 275 PANTHER PTHR19136 17 273 3.8E-127 T 23-04-2016 RR42_RS11935 9a0ae8ac86a49602f3068e46f883ad38 275 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 135 168 0.0019 T 23-04-2016 IPR001451 Hexapeptide repeat RR42_RS11935 9a0ae8ac86a49602f3068e46f883ad38 275 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 5 70 6.2E-25 T 23-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RR42_RS11935 9a0ae8ac86a49602f3068e46f883ad38 275 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 5 274 2.0E-146 T 23-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RR42_RS11935 9a0ae8ac86a49602f3068e46f883ad38 275 SUPERFAMILY SSF51161 4 258 3.6E-74 T 23-04-2016 IPR011004 Trimeric LpxA-like RR42_RS11935 9a0ae8ac86a49602f3068e46f883ad38 275 Gene3D G3DSA:2.160.10.10 91 257 2.3E-63 T 23-04-2016 RR42_RS11935 9a0ae8ac86a49602f3068e46f883ad38 275 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 177 211 1.1E-13 T 23-04-2016 IPR001451 Hexapeptide repeat RR42_RS11935 9a0ae8ac86a49602f3068e46f883ad38 275 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 136 164 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 RR42_RS11935 9a0ae8ac86a49602f3068e46f883ad38 275 PANTHER PTHR19136:SF52 17 273 3.8E-127 T 23-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RR42_RS11935 9a0ae8ac86a49602f3068e46f883ad38 275 Gene3D G3DSA:1.10.166.10 2 70 6.8E-30 T 23-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RR42_RS06025 fbd8aaeea6e5ad450cf38307d97b1621 405 PANTHER PTHR11601:SF34 7 405 1.8E-234 T 23-04-2016 RR42_RS06025 fbd8aaeea6e5ad450cf38307d97b1621 405 SUPERFAMILY SSF53383 7 391 9.97E-113 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS06025 fbd8aaeea6e5ad450cf38307d97b1621 405 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 198 217 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RR42_RS06025 fbd8aaeea6e5ad450cf38307d97b1621 405 Pfam PF00266 Aminotransferase class-V 8 369 9.8E-85 T 23-04-2016 IPR000192 Aminotransferase class V domain RR42_RS06025 fbd8aaeea6e5ad450cf38307d97b1621 405 Gene3D G3DSA:3.90.1150.10 255 375 3.3E-51 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS06025 fbd8aaeea6e5ad450cf38307d97b1621 405 PIRSF PIRSF005572 5 385 1.2E-135 T 23-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 RR42_RS06025 fbd8aaeea6e5ad450cf38307d97b1621 405 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 4 396 54.855 T 23-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 RR42_RS06025 fbd8aaeea6e5ad450cf38307d97b1621 405 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 6 405 7.5E-230 T 23-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 RR42_RS06025 fbd8aaeea6e5ad450cf38307d97b1621 405 PANTHER PTHR11601 7 405 1.8E-234 T 23-04-2016 RR42_RS06025 fbd8aaeea6e5ad450cf38307d97b1621 405 Gene3D G3DSA:3.40.640.10 20 254 5.0E-99 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS06215 e9dc431ea331d6eec927367b8d5bd969 297 Pfam PF12697 Alpha/beta hydrolase family 32 289 8.6E-21 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS06215 e9dc431ea331d6eec927367b8d5bd969 297 Gene3D G3DSA:3.40.50.1820 6 296 5.5E-62 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS06215 e9dc431ea331d6eec927367b8d5bd969 297 PRINTS PR00111 Alpha/beta hydrolase fold signature 119 132 1.4E-7 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS06215 e9dc431ea331d6eec927367b8d5bd969 297 PRINTS PR00111 Alpha/beta hydrolase fold signature 55 70 1.4E-7 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS06215 e9dc431ea331d6eec927367b8d5bd969 297 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 1.4E-7 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS06215 e9dc431ea331d6eec927367b8d5bd969 297 PANTHER PTHR10992 8 295 3.9E-37 T 23-04-2016 RR42_RS06215 e9dc431ea331d6eec927367b8d5bd969 297 SUPERFAMILY SSF53474 8 296 1.05E-52 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS06325 b7aad8a1dd1fca9ad1a2a353bf4d4dde 247 SUPERFAMILY SSF51161 2 169 1.32E-54 T 23-04-2016 IPR011004 Trimeric LpxA-like RR42_RS06325 b7aad8a1dd1fca9ad1a2a353bf4d4dde 247 Gene3D G3DSA:2.160.10.10 63 169 1.2E-36 T 23-04-2016 RR42_RS06325 b7aad8a1dd1fca9ad1a2a353bf4d4dde 247 PANTHER PTHR23416:SF55 1 229 1.2E-95 T 23-04-2016 RR42_RS06325 b7aad8a1dd1fca9ad1a2a353bf4d4dde 247 PANTHER PTHR23416 1 229 1.2E-95 T 23-04-2016 RR42_RS06325 b7aad8a1dd1fca9ad1a2a353bf4d4dde 247 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 8.7E-6 T 23-04-2016 IPR001451 Hexapeptide repeat RR42_RS06325 b7aad8a1dd1fca9ad1a2a353bf4d4dde 247 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 108 4.2E-6 T 23-04-2016 IPR001451 Hexapeptide repeat RR42_RS06325 b7aad8a1dd1fca9ad1a2a353bf4d4dde 247 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 167 1.1E-73 T 23-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 RR42_RS06325 b7aad8a1dd1fca9ad1a2a353bf4d4dde 247 Gene3D G3DSA:1.10.3130.10 1 62 3.7E-27 T 23-04-2016 RR42_RS06325 b7aad8a1dd1fca9ad1a2a353bf4d4dde 247 Pfam PF06426 Serine acetyltransferase, N-terminal 4 35 4.1E-5 T 23-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 RR42_RS29890 afb74dc17cc9c8e3c31fc849bc8351ee 293 Pfam PF12698 ABC-2 family transporter protein 2 278 5.9E-37 T 23-04-2016 RR42_RS29890 afb74dc17cc9c8e3c31fc849bc8351ee 293 PANTHER PTHR30294:SF12 1 276 6.8E-41 T 23-04-2016 RR42_RS29890 afb74dc17cc9c8e3c31fc849bc8351ee 293 PANTHER PTHR30294 1 276 6.8E-41 T 23-04-2016 RR42_RS33415 711aa9add5777d5881f44aa92205d5de 386 Gene3D G3DSA:3.30.470.20 225 386 3.3E-64 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RR42_RS33415 711aa9add5777d5881f44aa92205d5de 386 SUPERFAMILY SSF52440 38 155 2.16E-50 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RR42_RS33415 711aa9add5777d5881f44aa92205d5de 386 SUPERFAMILY SSF56059 153 386 2.3E-87 T 23-04-2016 RR42_RS33415 711aa9add5777d5881f44aa92205d5de 386 SUPERFAMILY SSF48108 1 29 3.01E-10 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS33415 711aa9add5777d5881f44aa92205d5de 386 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 153 358 1.8E-35 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RR42_RS33415 711aa9add5777d5881f44aa92205d5de 386 Gene3D G3DSA:3.30.1490.20 167 224 4.6E-26 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RR42_RS33415 711aa9add5777d5881f44aa92205d5de 386 PANTHER PTHR11405 1 386 6.7E-257 T 23-04-2016 RR42_RS33415 711aa9add5777d5881f44aa92205d5de 386 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 79 89 1.4E-27 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS33415 711aa9add5777d5881f44aa92205d5de 386 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 50 64 1.4E-27 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS33415 711aa9add5777d5881f44aa92205d5de 386 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 322 351 1.4E-27 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS33415 711aa9add5777d5881f44aa92205d5de 386 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 229 248 1.4E-27 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS33415 711aa9add5777d5881f44aa92205d5de 386 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 263 280 1.4E-27 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS33415 711aa9add5777d5881f44aa92205d5de 386 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 193 205 1.4E-27 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS33415 711aa9add5777d5881f44aa92205d5de 386 Gene3D G3DSA:3.40.50.20 1 142 2.1E-60 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RR42_RS33415 711aa9add5777d5881f44aa92205d5de 386 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 1 24 1.1E-7 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS33415 711aa9add5777d5881f44aa92205d5de 386 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 322 329 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RR42_RS33415 711aa9add5777d5881f44aa92205d5de 386 SMART SM01096 1 24 0.0067 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS33415 711aa9add5777d5881f44aa92205d5de 386 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 189 203 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RR42_RS17465 e0538fcbf39c9418ca1066503a694309 366 PANTHER PTHR11933 1 365 2.0E-180 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 RR42_RS17465 e0538fcbf39c9418ca1066503a694309 366 Gene3D G3DSA:2.30.30.280 218 286 2.8E-31 T 23-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 RR42_RS17465 e0538fcbf39c9418ca1066503a694309 366 Gene3D G3DSA:2.40.30.10 288 365 5.1E-27 T 23-04-2016 RR42_RS17465 e0538fcbf39c9418ca1066503a694309 366 SUPERFAMILY SSF52402 2 249 3.31E-56 T 23-04-2016 RR42_RS17465 e0538fcbf39c9418ca1066503a694309 366 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 5 365 1.7E-126 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 RR42_RS17465 e0538fcbf39c9418ca1066503a694309 366 Pfam PF03054 tRNA methyl transferase 5 365 2.3E-130 T 23-04-2016 RR42_RS17465 e0538fcbf39c9418ca1066503a694309 366 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 5 366 38.534 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 RR42_RS17465 e0538fcbf39c9418ca1066503a694309 366 Gene3D G3DSA:3.40.50.620 2 216 5.9E-94 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS17465 e0538fcbf39c9418ca1066503a694309 366 PANTHER PTHR11933:SF10 1 365 2.0E-180 T 23-04-2016 RR42_RS00765 dc80a9bd3240243441deaf25782f2cf2 130 Gene3D G3DSA:3.40.250.10 2 129 6.7E-34 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS00765 dc80a9bd3240243441deaf25782f2cf2 130 SUPERFAMILY SSF52821 2 129 1.57E-23 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS00765 dc80a9bd3240243441deaf25782f2cf2 130 SMART SM00450 5 113 8.8E-15 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS00765 dc80a9bd3240243441deaf25782f2cf2 130 Pfam PF00581 Rhodanese-like domain 6 105 4.9E-13 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS07900 715bbbd506f2e1be1b91aaf96e62fbea 424 PANTHER PTHR32494 11 418 7.6E-134 T 23-04-2016 RR42_RS07900 715bbbd506f2e1be1b91aaf96e62fbea 424 Gene3D G3DSA:3.30.70.360 238 335 1.4E-32 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS07900 715bbbd506f2e1be1b91aaf96e62fbea 424 Pfam PF07687 Peptidase dimerisation domain 225 323 1.9E-4 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS07900 715bbbd506f2e1be1b91aaf96e62fbea 424 Gene3D G3DSA:3.40.630.10 13 237 2.1E-94 T 23-04-2016 RR42_RS07900 715bbbd506f2e1be1b91aaf96e62fbea 424 Gene3D G3DSA:3.40.630.10 362 420 2.1E-94 T 23-04-2016 RR42_RS07900 715bbbd506f2e1be1b91aaf96e62fbea 424 SUPERFAMILY SSF55031 225 335 1.43E-25 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS07900 715bbbd506f2e1be1b91aaf96e62fbea 424 PIRSF PIRSF001235 12 423 2.2E-115 T 23-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 RR42_RS07900 715bbbd506f2e1be1b91aaf96e62fbea 424 SUPERFAMILY SSF53187 347 420 9.58E-76 T 23-04-2016 RR42_RS07900 715bbbd506f2e1be1b91aaf96e62fbea 424 SUPERFAMILY SSF53187 13 235 9.58E-76 T 23-04-2016 RR42_RS07900 715bbbd506f2e1be1b91aaf96e62fbea 424 Pfam PF01546 Peptidase family M20/M25/M40 85 418 6.9E-21 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RR42_RS07900 715bbbd506f2e1be1b91aaf96e62fbea 424 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 27 415 1.1E-102 T 23-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 RR42_RS04485 08eeecc3aa5d4ca7a1512fcf7d1b1420 220 Hamap MF_00238 Cytidylate kinase [cmk]. 5 219 31.812 T 23-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RR42_RS04485 08eeecc3aa5d4ca7a1512fcf7d1b1420 220 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 213 1.2E-70 T 23-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RR42_RS04485 08eeecc3aa5d4ca7a1512fcf7d1b1420 220 Gene3D G3DSA:3.40.50.300 6 215 4.7E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04485 08eeecc3aa5d4ca7a1512fcf7d1b1420 220 PANTHER PTHR21299 4 214 1.5E-63 T 23-04-2016 RR42_RS04485 08eeecc3aa5d4ca7a1512fcf7d1b1420 220 SUPERFAMILY SSF52540 6 216 1.93E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04485 08eeecc3aa5d4ca7a1512fcf7d1b1420 220 Pfam PF02224 Cytidylate kinase 7 213 1.0E-69 T 23-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RR42_RS18690 2dd4bb26f3189ad36e8903bf90dac422 368 PANTHER PTHR10245 1 271 1.8E-18 T 23-04-2016 RR42_RS18690 2dd4bb26f3189ad36e8903bf90dac422 368 Pfam PF01381 Helix-turn-helix 12 57 3.1E-10 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RR42_RS18690 2dd4bb26f3189ad36e8903bf90dac422 368 SUPERFAMILY SSF47413 7 67 2.95E-12 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS18690 2dd4bb26f3189ad36e8903bf90dac422 368 PANTHER PTHR10245:SF22 1 271 1.8E-18 T 23-04-2016 RR42_RS18690 2dd4bb26f3189ad36e8903bf90dac422 368 SMART SM00530 8 63 3.1E-7 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RR42_RS18690 2dd4bb26f3189ad36e8903bf90dac422 368 Pfam PF06114 Domain of unknown function (DUF955) 152 269 4.0E-20 T 23-04-2016 IPR010359 HTH domain, IrrE-type RR42_RS18690 2dd4bb26f3189ad36e8903bf90dac422 368 Gene3D G3DSA:1.10.260.40 7 58 4.4E-13 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS17360 832478d5f4667bdf111e77a04936dfb2 274 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 5 267 25.961 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RR42_RS17360 832478d5f4667bdf111e77a04936dfb2 274 Gene3D G3DSA:1.10.3730.10 164 267 1.9E-33 T 23-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RR42_RS17360 832478d5f4667bdf111e77a04936dfb2 274 PIRSF PIRSF000193 4 270 2.1E-70 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RR42_RS17360 832478d5f4667bdf111e77a04936dfb2 274 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 245 - T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RR42_RS17360 832478d5f4667bdf111e77a04936dfb2 274 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 8 267 8.8E-75 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RR42_RS17360 832478d5f4667bdf111e77a04936dfb2 274 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 267 1.1E-32 T 23-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RR42_RS17360 832478d5f4667bdf111e77a04936dfb2 274 SUPERFAMILY SSF48179 163 270 1.28E-32 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RR42_RS17360 832478d5f4667bdf111e77a04936dfb2 274 PANTHER PTHR11645 1 274 3.2E-91 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RR42_RS17360 832478d5f4667bdf111e77a04936dfb2 274 PANTHER PTHR11645:SF0 1 274 3.2E-91 T 23-04-2016 RR42_RS17360 832478d5f4667bdf111e77a04936dfb2 274 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 7 99 9.6E-16 T 23-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal RR42_RS17360 832478d5f4667bdf111e77a04936dfb2 274 Gene3D G3DSA:3.40.50.720 3 160 4.7E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS17360 832478d5f4667bdf111e77a04936dfb2 274 SUPERFAMILY SSF51735 7 160 1.07E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS12965 4e4ce8c6aa002056a64c93bde8a0505b 293 Gene3D G3DSA:1.10.3720.10 61 290 2.8E-57 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS12965 4e4ce8c6aa002056a64c93bde8a0505b 293 PANTHER PTHR32243 4 292 3.5E-107 T 23-04-2016 RR42_RS12965 4e4ce8c6aa002056a64c93bde8a0505b 293 PANTHER PTHR32243:SF13 4 292 3.5E-107 T 23-04-2016 RR42_RS12965 4e4ce8c6aa002056a64c93bde8a0505b 293 SUPERFAMILY SSF161098 55 281 5.36E-55 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS12965 4e4ce8c6aa002056a64c93bde8a0505b 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 292 2.5E-15 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS05270 254452edb79a3dd2cafcb9f17b17e428 117 PANTHER PTHR10395:SF7 1 117 1.6E-45 T 23-04-2016 RR42_RS05270 254452edb79a3dd2cafcb9f17b17e428 117 SUPERFAMILY SSF49472 1 117 6.02E-42 T 23-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily RR42_RS05270 254452edb79a3dd2cafcb9f17b17e428 117 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 23-04-2016 IPR023418 Transthyretin, thyroxine binding site RR42_RS05270 254452edb79a3dd2cafcb9f17b17e428 117 PRINTS PR00189 Transthyretin signature 3 23 1.6E-6 T 23-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase RR42_RS05270 254452edb79a3dd2cafcb9f17b17e428 117 PRINTS PR00189 Transthyretin signature 95 117 1.6E-6 T 23-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase RR42_RS05270 254452edb79a3dd2cafcb9f17b17e428 117 PANTHER PTHR10395 1 117 1.6E-45 T 23-04-2016 RR42_RS05270 254452edb79a3dd2cafcb9f17b17e428 117 Gene3D G3DSA:2.60.40.180 2 117 9.9E-38 T 23-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily RR42_RS05270 254452edb79a3dd2cafcb9f17b17e428 117 Pfam PF00576 HIUase/Transthyretin family 4 116 1.0E-35 T 23-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily RR42_RS05270 254452edb79a3dd2cafcb9f17b17e428 117 ProSitePatterns PS00769 Transthyretin signature 2. 100 112 - T 23-04-2016 IPR023419 Transthyretin, conserved site RR42_RS05270 254452edb79a3dd2cafcb9f17b17e428 117 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 117 1.4E-40 T 23-04-2016 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394 RR42_RS01825 8c43ff77965c36158e5f95d217ab592c 248 Gene3D G3DSA:3.40.50.1240 1 247 2.0E-97 T 23-04-2016 IPR029033 Histidine phosphatase superfamily RR42_RS01825 8c43ff77965c36158e5f95d217ab592c 248 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 246 1.3E-115 T 23-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 RR42_RS01825 8c43ff77965c36158e5f95d217ab592c 248 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 125 1.0E-28 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RR42_RS01825 8c43ff77965c36158e5f95d217ab592c 248 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 142 219 3.3E-5 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RR42_RS01825 8c43ff77965c36158e5f95d217ab592c 248 PANTHER PTHR11931 1 248 4.2E-157 T 23-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 RR42_RS01825 8c43ff77965c36158e5f95d217ab592c 248 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 23-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 RR42_RS01825 8c43ff77965c36158e5f95d217ab592c 248 SMART SM00855 3 189 2.4E-27 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RR42_RS01825 8c43ff77965c36158e5f95d217ab592c 248 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 44.954 T 23-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 RR42_RS01825 8c43ff77965c36158e5f95d217ab592c 248 SUPERFAMILY SSF53254 1 245 1.83E-78 T 23-04-2016 IPR029033 Histidine phosphatase superfamily RR42_RS08035 4e606dc71f8972cbcb49a4b695b38b87 594 SUPERFAMILY SSF53335 495 557 3.6E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS08035 4e606dc71f8972cbcb49a4b695b38b87 594 SUPERFAMILY SSF53335 7 314 3.6E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS08035 4e606dc71f8972cbcb49a4b695b38b87 594 Pfam PF00145 C-5 cytosine-specific DNA methylase 13 211 6.4E-7 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS08035 4e606dc71f8972cbcb49a4b695b38b87 594 Gene3D G3DSA:3.40.50.150 3 208 4.7E-17 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS08035 4e606dc71f8972cbcb49a4b695b38b87 594 Gene3D G3DSA:3.90.120.10 209 235 3.6E-7 T 23-04-2016 RR42_RS08035 4e606dc71f8972cbcb49a4b695b38b87 594 Gene3D G3DSA:3.90.120.10 437 546 3.6E-7 T 23-04-2016 RR42_RS18125 b10b6091d530eb7eac190b6f8c419e2b 207 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 46 206 3.0E-41 T 23-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 RR42_RS18125 b10b6091d530eb7eac190b6f8c419e2b 207 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 5 207 32.11 T 23-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 RR42_RS18125 b10b6091d530eb7eac190b6f8c419e2b 207 SUPERFAMILY SSF47240 43 180 4.33E-18 T 23-04-2016 IPR009078 Ferritin-like superfamily RR42_RS18125 b10b6091d530eb7eac190b6f8c419e2b 207 Gene3D G3DSA:1.20.1260.10 39 174 1.3E-10 T 23-04-2016 IPR012347 Ferritin-related RR42_RS18125 b10b6091d530eb7eac190b6f8c419e2b 207 PANTHER PTHR11237:SF3 1 207 1.7E-95 T 23-04-2016 RR42_RS18125 b10b6091d530eb7eac190b6f8c419e2b 207 PANTHER PTHR11237 1 207 1.7E-95 T 23-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 RR42_RS02570 f38a690b3145de24e2206be370e3d6e2 435 SMART SM00839 203 432 5.7E-102 T 23-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 RR42_RS02570 f38a690b3145de24e2206be370e3d6e2 435 PIRSF PIRSF000185 28 435 1.5E-165 T 23-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 RR42_RS02570 f38a690b3145de24e2206be370e3d6e2 435 SUPERFAMILY SSF53223 20 203 4.48E-68 T 23-04-2016 RR42_RS02570 f38a690b3145de24e2206be370e3d6e2 435 Gene3D G3DSA:3.40.50.720 201 434 6.1E-87 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS02570 f38a690b3145de24e2206be370e3d6e2 435 SUPERFAMILY SSF51735 201 434 3.71E-78 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS02570 f38a690b3145de24e2206be370e3d6e2 435 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 120 133 - T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RR42_RS02570 f38a690b3145de24e2206be370e3d6e2 435 PANTHER PTHR11606 50 433 1.7E-180 T 23-04-2016 RR42_RS02570 f38a690b3145de24e2206be370e3d6e2 435 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 201 432 1.0E-78 T 23-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 RR42_RS02570 f38a690b3145de24e2206be370e3d6e2 435 Gene3D G3DSA:3.40.192.10 59 199 8.2E-58 T 23-04-2016 RR42_RS02570 f38a690b3145de24e2206be370e3d6e2 435 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 234 254 1.2E-33 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RR42_RS02570 f38a690b3145de24e2206be370e3d6e2 435 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 360 371 1.2E-33 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RR42_RS02570 f38a690b3145de24e2206be370e3d6e2 435 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 112 126 1.2E-33 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RR42_RS02570 f38a690b3145de24e2206be370e3d6e2 435 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 192 214 1.2E-33 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RR42_RS02570 f38a690b3145de24e2206be370e3d6e2 435 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 55 183 5.9E-55 T 23-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 RR42_RS07805 3d1e222884b282b05ac1d810f4d9aa24 251 Gene3D G3DSA:3.40.190.10 117 203 1.3E-17 T 23-04-2016 RR42_RS07805 3d1e222884b282b05ac1d810f4d9aa24 251 SMART SM00062 26 250 3.9E-45 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RR42_RS07805 3d1e222884b282b05ac1d810f4d9aa24 251 PANTHER PTHR18966 23 247 9.5E-31 T 23-04-2016 RR42_RS07805 3d1e222884b282b05ac1d810f4d9aa24 251 PANTHER PTHR18966:SF191 23 247 9.5E-31 T 23-04-2016 RR42_RS07805 3d1e222884b282b05ac1d810f4d9aa24 251 SUPERFAMILY SSF53850 2 248 1.09E-54 T 23-04-2016 RR42_RS07805 3d1e222884b282b05ac1d810f4d9aa24 251 Gene3D G3DSA:3.40.190.10 210 248 2.7E-32 T 23-04-2016 RR42_RS07805 3d1e222884b282b05ac1d810f4d9aa24 251 Gene3D G3DSA:3.40.190.10 23 113 2.7E-32 T 23-04-2016 RR42_RS07805 3d1e222884b282b05ac1d810f4d9aa24 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 248 2.9E-52 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RR42_RS17765 cb038c8505aae9fd006dee997e4a5abd 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 322 2.0E-73 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS17765 cb038c8505aae9fd006dee997e4a5abd 326 SUPERFAMILY SSF53850 116 283 3.08E-13 T 23-04-2016 RR42_RS17765 cb038c8505aae9fd006dee997e4a5abd 326 PANTHER PTHR30349:SF1 8 297 4.3E-64 T 23-04-2016 RR42_RS17765 cb038c8505aae9fd006dee997e4a5abd 326 PANTHER PTHR30349 8 297 4.3E-64 T 23-04-2016 RR42_RS17765 cb038c8505aae9fd006dee997e4a5abd 326 PIRSF PIRSF017082 1 326 9.9E-70 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS12495 64b96ecb96dfe50c9bd931032e0b1781 394 Pfam PF13458 Periplasmic binding protein 27 365 4.5E-45 T 23-04-2016 IPR028081 Leucine-binding protein domain RR42_RS12495 64b96ecb96dfe50c9bd931032e0b1781 394 SUPERFAMILY SSF53822 27 390 1.09E-63 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RR42_RS12495 64b96ecb96dfe50c9bd931032e0b1781 394 Gene3D G3DSA:3.40.50.2300 162 302 1.9E-6 T 23-04-2016 RR42_RS12495 64b96ecb96dfe50c9bd931032e0b1781 394 PANTHER PTHR30483 10 394 3.7E-130 T 23-04-2016 RR42_RS12495 64b96ecb96dfe50c9bd931032e0b1781 394 Gene3D G3DSA:3.40.50.2300 303 355 2.0E-37 T 23-04-2016 RR42_RS12495 64b96ecb96dfe50c9bd931032e0b1781 394 Gene3D G3DSA:3.40.50.2300 24 152 2.0E-37 T 23-04-2016 RR42_RS12495 64b96ecb96dfe50c9bd931032e0b1781 394 PANTHER PTHR30483:SF9 10 394 3.7E-130 T 23-04-2016 RR42_RS01740 6efa73dd78076153cb3c7a6e99d07378 514 Gene3D G3DSA:3.30.230.10 10 178 3.8E-26 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RR42_RS01740 6efa73dd78076153cb3c7a6e99d07378 514 Gene3D G3DSA:3.40.50.300 204 403 5.9E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01740 6efa73dd78076153cb3c7a6e99d07378 514 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 133 4.7E-43 T 23-04-2016 RR42_RS01740 6efa73dd78076153cb3c7a6e99d07378 514 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 416 508 6.7E-32 T 23-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain RR42_RS01740 6efa73dd78076153cb3c7a6e99d07378 514 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 8 508 2.6E-182 T 23-04-2016 IPR004482 Mg chelatase-related protein RR42_RS01740 6efa73dd78076153cb3c7a6e99d07378 514 PANTHER PTHR32039:SF7 1 512 2.5E-238 T 23-04-2016 IPR004482 Mg chelatase-related protein RR42_RS01740 6efa73dd78076153cb3c7a6e99d07378 514 Pfam PF01078 Magnesium chelatase, subunit ChlI 204 409 1.5E-96 T 23-04-2016 IPR000523 Magnesium chelatase ChlI domain RR42_RS01740 6efa73dd78076153cb3c7a6e99d07378 514 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 303 317 1.8E-6 T 23-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 RR42_RS01740 6efa73dd78076153cb3c7a6e99d07378 514 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 223 238 1.8E-6 T 23-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 RR42_RS01740 6efa73dd78076153cb3c7a6e99d07378 514 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 355 367 1.8E-6 T 23-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 RR42_RS01740 6efa73dd78076153cb3c7a6e99d07378 514 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 331 344 1.8E-6 T 23-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 RR42_RS01740 6efa73dd78076153cb3c7a6e99d07378 514 SUPERFAMILY SSF54211 10 178 4.17E-30 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RR42_RS01740 6efa73dd78076153cb3c7a6e99d07378 514 SMART SM00382 224 406 1.3E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS01740 6efa73dd78076153cb3c7a6e99d07378 514 PANTHER PTHR32039 1 512 2.5E-238 T 23-04-2016 RR42_RS01740 6efa73dd78076153cb3c7a6e99d07378 514 SUPERFAMILY SSF52540 204 509 2.64E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07800 bfbf41689f95f48bb24b71ee4bc1ae91 280 SUPERFAMILY SSF55781 84 256 2.29E-44 T 23-04-2016 IPR029016 GAF domain-like RR42_RS07800 bfbf41689f95f48bb24b71ee4bc1ae91 280 SUPERFAMILY SSF46785 13 86 1.29E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS07800 bfbf41689f95f48bb24b71ee4bc1ae91 280 PANTHER PTHR30136 12 270 1.0E-57 T 23-04-2016 RR42_RS07800 bfbf41689f95f48bb24b71ee4bc1ae91 280 SMART SM00346 13 103 2.1E-22 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RR42_RS07800 bfbf41689f95f48bb24b71ee4bc1ae91 280 Pfam PF09339 IclR helix-turn-helix domain 16 66 7.1E-12 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RR42_RS07800 bfbf41689f95f48bb24b71ee4bc1ae91 280 Pfam PF01614 Bacterial transcriptional regulator 131 256 1.3E-26 T 23-04-2016 IPR014757 Transcription regulator IclR, C-terminal RR42_RS07800 bfbf41689f95f48bb24b71ee4bc1ae91 280 Gene3D G3DSA:1.10.10.10 7 84 8.1E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS07800 bfbf41689f95f48bb24b71ee4bc1ae91 280 Gene3D G3DSA:3.30.450.40 88 256 3.2E-48 T 23-04-2016 IPR029016 GAF domain-like RR42_RS00345 d3fca65a251bd47b6b1b9662af7960a1 303 Gene3D G3DSA:3.40.190.10 196 262 1.1E-4 T 23-04-2016 RR42_RS00345 d3fca65a251bd47b6b1b9662af7960a1 303 PANTHER PTHR30579:SF3 2 300 2.2E-62 T 23-04-2016 RR42_RS00345 d3fca65a251bd47b6b1b9662af7960a1 303 Gene3D G3DSA:1.10.10.10 11 89 8.1E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS00345 d3fca65a251bd47b6b1b9662af7960a1 303 Pfam PF03466 LysR substrate binding domain 93 299 2.4E-25 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS00345 d3fca65a251bd47b6b1b9662af7960a1 303 SUPERFAMILY SSF46785 9 117 1.72E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS00345 d3fca65a251bd47b6b1b9662af7960a1 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 4.5E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS00345 d3fca65a251bd47b6b1b9662af7960a1 303 PANTHER PTHR30579 2 300 2.2E-62 T 23-04-2016 RR42_RS00345 d3fca65a251bd47b6b1b9662af7960a1 303 SUPERFAMILY SSF53850 95 300 1.05E-28 T 23-04-2016 RR42_RS00345 d3fca65a251bd47b6b1b9662af7960a1 303 Gene3D G3DSA:3.40.190.10 98 195 1.2E-11 T 23-04-2016 RR42_RS09935 a81f7f8856d5f986cc0f00f97c3089ea 324 SUPERFAMILY SSF51004 14 308 1.02E-42 T 23-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain RR42_RS09935 a81f7f8856d5f986cc0f00f97c3089ea 324 PANTHER PTHR13833 151 310 3.6E-12 T 23-04-2016 RR42_RS09935 a81f7f8856d5f986cc0f00f97c3089ea 324 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 201 238 2.4E-7 T 23-04-2016 IPR011964 YVTN beta-propeller repeat RR42_RS09935 a81f7f8856d5f986cc0f00f97c3089ea 324 Gene3D G3DSA:2.130.10.10 19 313 1.7E-37 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RR42_RS15280 18844dd9a25760b80a93220d4bb6e08a 571 SUPERFAMILY SSF56801 26 559 1.16E-151 T 23-04-2016 RR42_RS15280 18844dd9a25760b80a93220d4bb6e08a 571 Gene3D G3DSA:2.30.38.10 378 455 1.2E-23 T 23-04-2016 RR42_RS15280 18844dd9a25760b80a93220d4bb6e08a 571 ProSitePatterns PS00455 Putative AMP-binding domain signature. 215 226 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS15280 18844dd9a25760b80a93220d4bb6e08a 571 Gene3D G3DSA:3.30.300.30 461 565 8.3E-30 T 23-04-2016 RR42_RS15280 18844dd9a25760b80a93220d4bb6e08a 571 Pfam PF13193 AMP-binding enzyme C-terminal domain 473 550 4.6E-21 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RR42_RS15280 18844dd9a25760b80a93220d4bb6e08a 571 Gene3D G3DSA:3.40.50.980 221 377 1.5E-46 T 23-04-2016 RR42_RS15280 18844dd9a25760b80a93220d4bb6e08a 571 Pfam PF00501 AMP-binding enzyme 36 463 2.9E-106 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS15280 18844dd9a25760b80a93220d4bb6e08a 571 PANTHER PTHR24096 184 558 1.2E-160 T 23-04-2016 RR42_RS15280 18844dd9a25760b80a93220d4bb6e08a 571 PANTHER PTHR24096 22 165 1.2E-160 T 23-04-2016 RR42_RS15280 18844dd9a25760b80a93220d4bb6e08a 571 Gene3D G3DSA:3.40.50.980 36 220 1.0E-37 T 23-04-2016 RR42_RS00640 eb074f3df48263334b6dece4c9f7101f 216 Pfam PF02682 Allophanate hydrolase subunit 1 6 200 1.2E-72 T 23-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D RR42_RS00640 eb074f3df48263334b6dece4c9f7101f 216 Gene3D G3DSA:3.30.1360.40 6 76 5.0E-12 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain RR42_RS00640 eb074f3df48263334b6dece4c9f7101f 216 SUPERFAMILY SSF50891 87 210 1.29E-46 T 23-04-2016 IPR029000 Cyclophilin-like domain RR42_RS00640 eb074f3df48263334b6dece4c9f7101f 216 Gene3D G3DSA:2.40.100.10 87 210 1.1E-51 T 23-04-2016 IPR029000 Cyclophilin-like domain RR42_RS00640 eb074f3df48263334b6dece4c9f7101f 216 SMART SM00796 4 201 2.8E-103 T 23-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D RR42_RS00640 eb074f3df48263334b6dece4c9f7101f 216 PANTHER PTHR34698:SF2 1 210 6.6E-88 T 23-04-2016 RR42_RS00640 eb074f3df48263334b6dece4c9f7101f 216 SUPERFAMILY SSF160467 7 91 2.35E-11 T 23-04-2016 RR42_RS00640 eb074f3df48263334b6dece4c9f7101f 216 PANTHER PTHR34698 1 210 6.6E-88 T 23-04-2016 RR42_RS00640 eb074f3df48263334b6dece4c9f7101f 216 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 210 2.5E-77 T 23-04-2016 IPR010016 KipI family RR42_RS22425 6e23ddd8c3f85e49b192f50bd481f156 222 PANTHER PTHR32089 1 222 1.5E-22 T 23-04-2016 RR42_RS22425 6e23ddd8c3f85e49b192f50bd481f156 222 Pfam PF00672 HAMP domain 98 156 1.4E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS22425 6e23ddd8c3f85e49b192f50bd481f156 222 PANTHER PTHR32089:SF64 1 222 1.5E-22 T 23-04-2016 RR42_RS17350 4e659400fd977e0e8bc74eb7fae211e5 347 Gene3D G3DSA:3.40.50.300 100 343 4.0E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17350 4e659400fd977e0e8bc74eb7fae211e5 347 SUPERFAMILY SSF52540 5 336 1.0E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17350 4e659400fd977e0e8bc74eb7fae211e5 347 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 343 7.9E-150 T 23-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 RR42_RS17350 4e659400fd977e0e8bc74eb7fae211e5 347 PANTHER PTHR30486:SF6 1 345 2.4E-181 T 23-04-2016 RR42_RS17350 4e659400fd977e0e8bc74eb7fae211e5 347 PANTHER PTHR30486 1 345 2.4E-181 T 23-04-2016 RR42_RS17350 4e659400fd977e0e8bc74eb7fae211e5 347 SMART SM00382 122 247 0.0028 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS17350 4e659400fd977e0e8bc74eb7fae211e5 347 Pfam PF00437 Type II/IV secretion system protein 12 266 3.0E-46 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RR42_RS17350 4e659400fd977e0e8bc74eb7fae211e5 347 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RR42_RS19315 0dc48c2ced5d68ef7981603c23cc1f6f 1414 Gene3D G3DSA:2.40.50.100 988 1024 8.5E-7 T 23-04-2016 RR42_RS19315 0dc48c2ced5d68ef7981603c23cc1f6f 1414 Gene3D G3DSA:2.40.50.100 1163 1215 2.0E-4 T 23-04-2016 RR42_RS19315 0dc48c2ced5d68ef7981603c23cc1f6f 1414 Pfam PF04998 RNA polymerase Rpb1, domain 5 772 1322 4.2E-77 T 23-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19315 0dc48c2ced5d68ef7981603c23cc1f6f 1414 SUPERFAMILY SSF64484 16 950 0.0 T 23-04-2016 RR42_RS19315 0dc48c2ced5d68ef7981603c23cc1f6f 1414 SUPERFAMILY SSF64484 1140 1370 0.0 T 23-04-2016 RR42_RS19315 0dc48c2ced5d68ef7981603c23cc1f6f 1414 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1382 10.406 T 23-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RR42_RS19315 0dc48c2ced5d68ef7981603c23cc1f6f 1414 Gene3D G3DSA:2.40.40.20 418 490 1.6E-36 T 23-04-2016 RR42_RS19315 0dc48c2ced5d68ef7981603c23cc1f6f 1414 Gene3D G3DSA:2.40.40.20 350 377 1.6E-36 T 23-04-2016 RR42_RS19315 0dc48c2ced5d68ef7981603c23cc1f6f 1414 Pfam PF05000 RNA polymerase Rpb1, domain 4 679 769 1.3E-18 T 23-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19315 0dc48c2ced5d68ef7981603c23cc1f6f 1414 PANTHER PTHR19376 1183 1268 0.0 T 23-04-2016 RR42_RS19315 0dc48c2ced5d68ef7981603c23cc1f6f 1414 PANTHER PTHR19376 1309 1395 0.0 T 23-04-2016 RR42_RS19315 0dc48c2ced5d68ef7981603c23cc1f6f 1414 PANTHER PTHR19376 576 949 0.0 T 23-04-2016 RR42_RS19315 0dc48c2ced5d68ef7981603c23cc1f6f 1414 PANTHER PTHR19376 4 552 0.0 T 23-04-2016 RR42_RS19315 0dc48c2ced5d68ef7981603c23cc1f6f 1414 PANTHER PTHR19376 968 1164 0.0 T 23-04-2016 RR42_RS19315 0dc48c2ced5d68ef7981603c23cc1f6f 1414 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 594 32.182 T 23-04-2016 RR42_RS19315 0dc48c2ced5d68ef7981603c23cc1f6f 1414 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 343 4.2E-87 T 23-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19315 0dc48c2ced5d68ef7981603c23cc1f6f 1414 SMART SM00663 236 515 4.2E-173 T 23-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19315 0dc48c2ced5d68ef7981603c23cc1f6f 1414 PANTHER PTHR19376:SF32 1183 1268 0.0 T 23-04-2016 RR42_RS19315 0dc48c2ced5d68ef7981603c23cc1f6f 1414 PANTHER PTHR19376:SF32 1309 1395 0.0 T 23-04-2016 RR42_RS19315 0dc48c2ced5d68ef7981603c23cc1f6f 1414 PANTHER PTHR19376:SF32 576 949 0.0 T 23-04-2016 RR42_RS19315 0dc48c2ced5d68ef7981603c23cc1f6f 1414 PANTHER PTHR19376:SF32 4 552 0.0 T 23-04-2016 RR42_RS19315 0dc48c2ced5d68ef7981603c23cc1f6f 1414 PANTHER PTHR19376:SF32 968 1164 0.0 T 23-04-2016 RR42_RS19315 0dc48c2ced5d68ef7981603c23cc1f6f 1414 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1026 0.0 T 23-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RR42_RS19315 0dc48c2ced5d68ef7981603c23cc1f6f 1414 Pfam PF00623 RNA polymerase Rpb1, domain 2 345 386 1.3E-7 T 23-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19315 0dc48c2ced5d68ef7981603c23cc1f6f 1414 Pfam PF00623 RNA polymerase Rpb1, domain 2 391 486 6.9E-28 T 23-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS19315 0dc48c2ced5d68ef7981603c23cc1f6f 1414 Pfam PF04983 RNA polymerase Rpb1, domain 3 490 650 4.9E-21 T 23-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RR42_RS02080 3a1c5990914a6ae78b6304ceb7930c79 116 Gene3D G3DSA:3.30.160.100 1 100 3.0E-33 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RR42_RS02080 3a1c5990914a6ae78b6304ceb7930c79 116 SUPERFAMILY SSF69754 1 106 6.15E-33 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RR42_RS02080 3a1c5990914a6ae78b6304ceb7930c79 116 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 103 3.9E-30 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RR42_RS02080 3a1c5990914a6ae78b6304ceb7930c79 116 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 97 6.2E-26 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RR42_RS02080 3a1c5990914a6ae78b6304ceb7930c79 116 PANTHER PTHR33231 1 104 1.7E-32 T 23-04-2016 RR42_RS03275 1581b22d0eacb32272fcc6a1c594163d 156 PANTHER PTHR42641 2 130 2.4E-36 T 23-04-2016 RR42_RS03275 1581b22d0eacb32272fcc6a1c594163d 156 PANTHER PTHR42641:SF2 2 130 2.4E-36 T 23-04-2016 RR42_RS03275 1581b22d0eacb32272fcc6a1c594163d 156 Pfam PF05232 Chlorhexidine efflux transporter 2 64 8.3E-24 T 23-04-2016 IPR007896 Chlorhexidine efflux transporter RR42_RS03275 1581b22d0eacb32272fcc6a1c594163d 156 Pfam PF05232 Chlorhexidine efflux transporter 73 134 5.7E-24 T 23-04-2016 IPR007896 Chlorhexidine efflux transporter RR42_RS16920 a783bb6b1889892f577e21dee20faa73 526 PANTHER PTHR10362:SF7 1 507 1.5E-235 T 23-04-2016 RR42_RS16920 a783bb6b1889892f577e21dee20faa73 526 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 15 509 1.0E-209 T 23-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RR42_RS16920 a783bb6b1889892f577e21dee20faa73 526 SUPERFAMILY SSF48557 7 507 7.14E-191 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 RR42_RS16920 a783bb6b1889892f577e21dee20faa73 526 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 13 513 43.886 T 23-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RR42_RS16920 a783bb6b1889892f577e21dee20faa73 526 Pfam PF00221 Aromatic amino acid lyase 22 479 6.2E-185 T 23-04-2016 IPR001106 Aromatic amino acid lyase RR42_RS16920 a783bb6b1889892f577e21dee20faa73 526 Gene3D G3DSA:1.20.200.10 208 507 1.6E-127 T 23-04-2016 RR42_RS16920 a783bb6b1889892f577e21dee20faa73 526 Gene3D G3DSA:1.10.275.10 4 207 9.4E-73 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal RR42_RS16920 a783bb6b1889892f577e21dee20faa73 526 PANTHER PTHR10362 1 507 1.5E-235 T 23-04-2016 RR42_RS16920 a783bb6b1889892f577e21dee20faa73 526 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 149 164 - T 23-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 RR42_RS11210 c0b8c64f1b93a45a90b957c454366539 484 PIRSF PIRSF012702 1 484 7.5E-171 T 23-04-2016 IPR009197 Microcystin LR degradation protein MlrC RR42_RS11210 c0b8c64f1b93a45a90b957c454366539 484 Pfam PF07364 Metallopeptidase family M81 2 288 1.4E-93 T 23-04-2016 IPR015995 Microcystin LR degradation protein MlrC, N-terminal RR42_RS11210 c0b8c64f1b93a45a90b957c454366539 484 Pfam PF07171 MlrC C-terminus 297 471 1.1E-52 T 23-04-2016 IPR010799 Microcystin LR degradation protein MlrC, C-terminal RR42_RS00455 26c0cc3260a17a15e5e5ccf7cd4a5d9a 271 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 9.3E-105 T 23-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 RR42_RS00455 26c0cc3260a17a15e5e5ccf7cd4a5d9a 271 Gene3D G3DSA:3.40.50.300 1 248 2.2E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS00455 26c0cc3260a17a15e5e5ccf7cd4a5d9a 271 PIRSF PIRSF003092 1 271 2.7E-89 T 23-04-2016 IPR025501 ATP binding protein MinD RR42_RS00455 26c0cc3260a17a15e5e5ccf7cd4a5d9a 271 PANTHER PTHR13696 1 258 3.7E-84 T 23-04-2016 RR42_RS00455 26c0cc3260a17a15e5e5ccf7cd4a5d9a 271 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 217 1.6E-27 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RR42_RS00455 26c0cc3260a17a15e5e5ccf7cd4a5d9a 271 PANTHER PTHR13696:SF1 1 258 3.7E-84 T 23-04-2016 RR42_RS00455 26c0cc3260a17a15e5e5ccf7cd4a5d9a 271 SUPERFAMILY SSF52540 1 269 2.8E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12400 fdb4a9aaf56130d6efbcf61ce979cd3a 916 SUPERFAMILY SSF47384 650 718 6.08E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS12400 fdb4a9aaf56130d6efbcf61ce979cd3a 916 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 783 897 3.8E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS12400 fdb4a9aaf56130d6efbcf61ce979cd3a 916 Gene3D G3DSA:3.30.565.10 741 897 6.8E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS12400 fdb4a9aaf56130d6efbcf61ce979cd3a 916 SMART SM00387 780 900 1.4E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS12400 fdb4a9aaf56130d6efbcf61ce979cd3a 916 PRINTS PR00344 Bacterial sensor protein C-terminal signature 856 874 3.1E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS12400 fdb4a9aaf56130d6efbcf61ce979cd3a 916 PRINTS PR00344 Bacterial sensor protein C-terminal signature 884 897 3.1E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS12400 fdb4a9aaf56130d6efbcf61ce979cd3a 916 PRINTS PR00344 Bacterial sensor protein C-terminal signature 843 853 3.1E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS12400 fdb4a9aaf56130d6efbcf61ce979cd3a 916 PRINTS PR00344 Bacterial sensor protein C-terminal signature 825 839 3.1E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS12400 fdb4a9aaf56130d6efbcf61ce979cd3a 916 Pfam PF00512 His Kinase A (phospho-acceptor) domain 654 731 2.3E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS12400 fdb4a9aaf56130d6efbcf61ce979cd3a 916 SUPERFAMILY SSF55874 730 902 3.67E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS12400 fdb4a9aaf56130d6efbcf61ce979cd3a 916 PANTHER PTHR24423:SF445 638 682 9.7E-54 T 23-04-2016 RR42_RS12400 fdb4a9aaf56130d6efbcf61ce979cd3a 916 PANTHER PTHR24423:SF445 704 898 9.7E-54 T 23-04-2016 RR42_RS12400 fdb4a9aaf56130d6efbcf61ce979cd3a 916 PANTHER PTHR24423 638 682 9.7E-54 T 23-04-2016 RR42_RS12400 fdb4a9aaf56130d6efbcf61ce979cd3a 916 PANTHER PTHR24423 704 898 9.7E-54 T 23-04-2016 RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 Pfam PF00204 DNA gyrase B 267 405 1.2E-32 T 23-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 SMART SM00433 36 657 2.1E-180 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 Gene3D G3DSA:3.40.50.670 418 642 3.3E-76 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 SUPERFAMILY SSF55874 7 222 1.83E-58 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 ProSitePatterns PS00177 DNA topoisomerase II signature. 436 444 - T 23-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 589 653 6.9E-24 T 23-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 PANTHER PTHR10169:SF45 6 663 0.0 T 23-04-2016 RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 Gene3D G3DSA:3.30.565.10 18 222 1.9E-68 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 PANTHER PTHR10169 6 663 0.0 T 23-04-2016 RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 SMART SM00387 30 180 7.3E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 SUPERFAMILY SSF54211 263 407 3.6E-35 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 SUPERFAMILY SSF56719 408 658 2.22E-74 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 Pfam PF01751 Toprim domain 433 538 1.5E-11 T 23-04-2016 IPR006171 Toprim domain RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 5 661 43.731 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 36 178 5.7E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 Gene3D G3DSA:3.30.230.10 265 407 2.6E-37 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 PRINTS PR00418 DNA topoisomerase II family signature 34 49 5.7E-60 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 PRINTS PR00418 DNA topoisomerase II family signature 286 299 5.7E-60 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 PRINTS PR00418 DNA topoisomerase II family signature 541 553 5.7E-60 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 PRINTS PR00418 DNA topoisomerase II family signature 69 82 5.7E-60 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 PRINTS PR00418 DNA topoisomerase II family signature 434 448 5.7E-60 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 PRINTS PR00418 DNA topoisomerase II family signature 521 538 5.7E-60 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 PRINTS PR00418 DNA topoisomerase II family signature 503 519 5.7E-60 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 PRINTS PR00418 DNA topoisomerase II family signature 115 129 5.7E-60 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 PRINTS PR00418 DNA topoisomerase II family signature 593 609 5.7E-60 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 PRINTS PR01098 Topoisomerase IV subunit B signature 259 282 7.7E-28 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 PRINTS PR01098 Topoisomerase IV subunit B signature 331 346 7.7E-28 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 PRINTS PR01098 Topoisomerase IV subunit B signature 382 407 7.7E-28 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 PRINTS PR01098 Topoisomerase IV subunit B signature 29 42 7.7E-28 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 PRINTS PR01098 Topoisomerase IV subunit B signature 358 381 7.7E-28 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 PRINTS PR01098 Topoisomerase IV subunit B signature 314 330 7.7E-28 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RR42_RS14675 3fc759cdfde2ef402981740a2455de20 663 PRINTS PR01098 Topoisomerase IV subunit B signature 468 489 7.7E-28 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RR42_RS17890 f4d6d4b81d9b6380eacb87995bf53bf1 464 SMART SM00963 1 86 2.7E-27 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RR42_RS17890 f4d6d4b81d9b6380eacb87995bf53bf1 464 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 438 4.3E-172 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 RR42_RS17890 f4d6d4b81d9b6380eacb87995bf53bf1 464 Gene3D G3DSA:3.40.50.300 102 305 5.1E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17890 f4d6d4b81d9b6380eacb87995bf53bf1 464 Pfam PF00448 SRP54-type protein, GTPase domain 109 304 3.6E-72 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RR42_RS17890 f4d6d4b81d9b6380eacb87995bf53bf1 464 SMART SM00382 107 309 5.8E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS17890 f4d6d4b81d9b6380eacb87995bf53bf1 464 SUPERFAMILY SSF47446 336 439 1.8E-34 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RR42_RS17890 f4d6d4b81d9b6380eacb87995bf53bf1 464 Gene3D G3DSA:1.10.260.30 337 440 2.2E-37 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RR42_RS17890 f4d6d4b81d9b6380eacb87995bf53bf1 464 SMART SM00962 108 304 1.7E-119 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RR42_RS17890 f4d6d4b81d9b6380eacb87995bf53bf1 464 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 448 33.155 T 23-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 RR42_RS17890 f4d6d4b81d9b6380eacb87995bf53bf1 464 PANTHER PTHR11564:SF7 1 444 3.5E-245 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 RR42_RS17890 f4d6d4b81d9b6380eacb87995bf53bf1 464 Gene3D G3DSA:1.20.120.140 2 89 1.1E-30 T 23-04-2016 RR42_RS17890 f4d6d4b81d9b6380eacb87995bf53bf1 464 SUPERFAMILY SSF52540 42 366 8.39E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17890 f4d6d4b81d9b6380eacb87995bf53bf1 464 Pfam PF02978 Signal peptide binding domain 337 436 9.2E-32 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RR42_RS17890 f4d6d4b81d9b6380eacb87995bf53bf1 464 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.3E-16 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RR42_RS17890 f4d6d4b81d9b6380eacb87995bf53bf1 464 PANTHER PTHR11564 1 444 3.5E-245 T 23-04-2016 RR42_RS17890 f4d6d4b81d9b6380eacb87995bf53bf1 464 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 277 290 - T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RR42_RS11435 17cd375f4ca9d87abe595a579c6b9448 297 SUPERFAMILY SSF53850 41 290 3.78E-27 T 23-04-2016 RR42_RS11435 17cd375f4ca9d87abe595a579c6b9448 297 SMART SM00062 50 294 3.0E-4 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RR42_RS11435 17cd375f4ca9d87abe595a579c6b9448 297 Gene3D G3DSA:3.40.190.10 28 97 2.4E-9 T 23-04-2016 RR42_RS11435 17cd375f4ca9d87abe595a579c6b9448 297 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 144 291 4.9E-15 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RR42_RS11435 17cd375f4ca9d87abe595a579c6b9448 297 Gene3D G3DSA:3.40.190.10 159 225 2.4E-6 T 23-04-2016 RR42_RS11435 17cd375f4ca9d87abe595a579c6b9448 297 Gene3D G3DSA:3.40.190.10 226 290 1.0E-6 T 23-04-2016 RR42_RS10235 ac20b86637d1894ff0d9a59800279a6b 639 PANTHER PTHR24096:SF170 32 617 3.7E-171 T 23-04-2016 RR42_RS10235 ac20b86637d1894ff0d9a59800279a6b 639 Pfam PF00501 AMP-binding enzyme 57 479 7.0E-75 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS10235 ac20b86637d1894ff0d9a59800279a6b 639 Gene3D G3DSA:3.40.50.980 229 394 1.8E-33 T 23-04-2016 RR42_RS10235 ac20b86637d1894ff0d9a59800279a6b 639 Gene3D G3DSA:3.40.50.980 47 228 7.9E-20 T 23-04-2016 RR42_RS10235 ac20b86637d1894ff0d9a59800279a6b 639 Gene3D G3DSA:2.30.38.10 395 473 1.7E-18 T 23-04-2016 RR42_RS10235 ac20b86637d1894ff0d9a59800279a6b 639 ProSitePatterns PS00455 Putative AMP-binding domain signature. 225 236 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS10235 ac20b86637d1894ff0d9a59800279a6b 639 PANTHER PTHR24096 32 617 3.7E-171 T 23-04-2016 RR42_RS10235 ac20b86637d1894ff0d9a59800279a6b 639 Pfam PF13193 AMP-binding enzyme C-terminal domain 489 564 1.3E-17 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RR42_RS10235 ac20b86637d1894ff0d9a59800279a6b 639 SUPERFAMILY SSF56801 38 576 8.5E-124 T 23-04-2016 RR42_RS10235 ac20b86637d1894ff0d9a59800279a6b 639 Gene3D G3DSA:3.30.300.30 476 576 3.6E-28 T 23-04-2016 RR42_RS15140 5c1e240022da80bd53e80b992ff89b5f 478 SUPERFAMILY SSF141322 395 461 1.1E-11 T 23-04-2016 RR42_RS15140 5c1e240022da80bd53e80b992ff89b5f 478 Gene3D G3DSA:3.90.226.10 199 229 6.5E-16 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS15140 5c1e240022da80bd53e80b992ff89b5f 478 Gene3D G3DSA:3.90.226.10 44 144 6.5E-16 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS15140 5c1e240022da80bd53e80b992ff89b5f 478 Gene3D G3DSA:2.40.50.140 406 459 4.9E-8 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS15140 5c1e240022da80bd53e80b992ff89b5f 478 PANTHER PTHR33507:SF1 33 463 4.7E-140 T 23-04-2016 RR42_RS15140 5c1e240022da80bd53e80b992ff89b5f 478 PANTHER PTHR33507 33 463 4.7E-140 T 23-04-2016 RR42_RS15140 5c1e240022da80bd53e80b992ff89b5f 478 Pfam PF01957 NfeD-like C-terminal, partner-binding 325 459 5.0E-33 T 23-04-2016 IPR002810 NfeD-like, C-terminal domain RR42_RS15140 5c1e240022da80bd53e80b992ff89b5f 478 SUPERFAMILY SSF52096 40 223 5.97E-25 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS02000 c70adace71859530c1472d3e93961e87 86 Gene3D G3DSA:3.30.70.20 4 69 4.0E-18 T 23-04-2016 RR42_RS02000 c70adace71859530c1472d3e93961e87 86 SUPERFAMILY SSF54862 5 76 1.48E-18 T 23-04-2016 RR42_RS02000 c70adace71859530c1472d3e93961e87 86 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RR42_RS02000 c70adace71859530c1472d3e93961e87 86 Pfam PF12838 4Fe-4S dicluster domain 9 57 9.3E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RR42_RS02000 c70adace71859530c1472d3e93961e87 86 PANTHER PTHR24960:SF38 1 81 3.5E-27 T 23-04-2016 RR42_RS02000 c70adace71859530c1472d3e93961e87 86 PANTHER PTHR24960 1 81 3.5E-27 T 23-04-2016 RR42_RS15085 8c3827b3804757e573f83f5561b2b4d9 325 PANTHER PTHR30349:SF16 9 295 5.0E-88 T 23-04-2016 RR42_RS15085 8c3827b3804757e573f83f5561b2b4d9 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 321 3.9E-91 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS15085 8c3827b3804757e573f83f5561b2b4d9 325 PANTHER PTHR30349 9 295 5.0E-88 T 23-04-2016 RR42_RS15085 8c3827b3804757e573f83f5561b2b4d9 325 PIRSF PIRSF017082 1 324 8.9E-83 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS15085 8c3827b3804757e573f83f5561b2b4d9 325 SUPERFAMILY SSF53850 115 279 2.41E-11 T 23-04-2016 RR42_RS18905 b800c964ad72dc4a1333c2c7faefd0e4 197 Gene3D G3DSA:3.30.230.40 1 88 3.3E-39 T 23-04-2016 RR42_RS18905 b800c964ad72dc4a1333c2c7faefd0e4 197 PANTHER PTHR23133:SF2 1 195 1.2E-103 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RR42_RS18905 b800c964ad72dc4a1333c2c7faefd0e4 197 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 23-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RR42_RS18905 b800c964ad72dc4a1333c2c7faefd0e4 197 SUPERFAMILY SSF54211 1 86 7.21E-34 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RR42_RS18905 b800c964ad72dc4a1333c2c7faefd0e4 197 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 32 174 1.2E-62 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RR42_RS18905 b800c964ad72dc4a1333c2c7faefd0e4 197 Gene3D G3DSA:3.30.230.40 90 195 1.0E-29 T 23-04-2016 RR42_RS18905 b800c964ad72dc4a1333c2c7faefd0e4 197 PANTHER PTHR23133 1 195 1.2E-103 T 23-04-2016 RR42_RS18905 b800c964ad72dc4a1333c2c7faefd0e4 197 SUPERFAMILY SSF54211 88 178 1.13E-33 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RR42_RS18905 b800c964ad72dc4a1333c2c7faefd0e4 197 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 23-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RR42_RS18905 b800c964ad72dc4a1333c2c7faefd0e4 197 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 195 42.437 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RR42_RS20035 3e4ce903a6f6ad8a67bbfb0757992a20 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 372 5.9E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS20035 3e4ce903a6f6ad8a67bbfb0757992a20 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 319 333 5.9E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS20035 3e4ce903a6f6ad8a67bbfb0757992a20 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 391 5.9E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS20035 3e4ce903a6f6ad8a67bbfb0757992a20 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 337 347 5.9E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS20035 3e4ce903a6f6ad8a67bbfb0757992a20 393 SMART SM00388 188 246 4.5E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS20035 3e4ce903a6f6ad8a67bbfb0757992a20 393 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 288 392 1.2E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS20035 3e4ce903a6f6ad8a67bbfb0757992a20 393 Gene3D G3DSA:1.10.287.130 178 232 4.2E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS20035 3e4ce903a6f6ad8a67bbfb0757992a20 393 PANTHER PTHR24423 129 393 5.7E-56 T 23-04-2016 RR42_RS20035 3e4ce903a6f6ad8a67bbfb0757992a20 393 SMART SM00387 285 393 8.9E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS20035 3e4ce903a6f6ad8a67bbfb0757992a20 393 SUPERFAMILY SSF47384 172 243 6.47E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS20035 3e4ce903a6f6ad8a67bbfb0757992a20 393 Pfam PF00512 His Kinase A (phospho-acceptor) domain 189 229 4.9E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS20035 3e4ce903a6f6ad8a67bbfb0757992a20 393 Pfam PF00672 HAMP domain 118 183 1.1E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS20035 3e4ce903a6f6ad8a67bbfb0757992a20 393 Gene3D G3DSA:3.30.565.10 233 392 1.1E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS20035 3e4ce903a6f6ad8a67bbfb0757992a20 393 SMART SM00304 134 187 4.5E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS20035 3e4ce903a6f6ad8a67bbfb0757992a20 393 SUPERFAMILY SSF55874 243 392 9.69E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS02130 2333b12e7fc9dd3087b7695649ed1bc7 561 Pfam PF02690 Na+/Pi-cotransporter 13 148 7.9E-35 T 23-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 RR42_RS02130 2333b12e7fc9dd3087b7695649ed1bc7 561 Pfam PF02690 Na+/Pi-cotransporter 159 253 1.3E-12 T 23-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 RR42_RS02130 2333b12e7fc9dd3087b7695649ed1bc7 561 Pfam PF01895 PhoU domain 340 424 3.5E-12 T 23-04-2016 IPR026022 PhoU domain RR42_RS02130 2333b12e7fc9dd3087b7695649ed1bc7 561 Gene3D G3DSA:1.20.58.220 330 427 7.0E-14 T 23-04-2016 RR42_RS02130 2333b12e7fc9dd3087b7695649ed1bc7 561 Gene3D G3DSA:1.20.58.220 443 519 1.0E-6 T 23-04-2016 RR42_RS02130 2333b12e7fc9dd3087b7695649ed1bc7 561 PANTHER PTHR10010 1 446 2.4E-32 T 23-04-2016 RR42_RS02130 2333b12e7fc9dd3087b7695649ed1bc7 561 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 306 1.9E-81 T 23-04-2016 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 RR42_RS02130 2333b12e7fc9dd3087b7695649ed1bc7 561 SUPERFAMILY SSF109755 320 532 2.51E-35 T 23-04-2016 RR42_RS02130 2333b12e7fc9dd3087b7695649ed1bc7 561 PANTHER PTHR10010:SF26 1 446 2.4E-32 T 23-04-2016 RR42_RS13185 4ac5c6ced8cdc644d95fcf6246e8296b 392 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 110 391 6.7E-136 T 23-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS13185 4ac5c6ced8cdc644d95fcf6246e8296b 392 SUPERFAMILY SSF88659 229 305 6.54E-10 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS13185 4ac5c6ced8cdc644d95fcf6246e8296b 392 Pfam PF00140 Sigma-70 factor, region 1.2 118 150 1.5E-5 T 23-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS13185 4ac5c6ced8cdc644d95fcf6246e8296b 392 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 351 377 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS13185 4ac5c6ced8cdc644d95fcf6246e8296b 392 Gene3D G3DSA:1.10.601.10 112 225 2.2E-52 T 23-04-2016 RR42_RS13185 4ac5c6ced8cdc644d95fcf6246e8296b 392 Pfam PF04539 Sigma-70 region 3 236 312 1.4E-12 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS13185 4ac5c6ced8cdc644d95fcf6246e8296b 392 SUPERFAMILY SSF88946 118 226 2.75E-43 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS13185 4ac5c6ced8cdc644d95fcf6246e8296b 392 Pfam PF04542 Sigma-70 region 2 156 225 7.9E-20 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS13185 4ac5c6ced8cdc644d95fcf6246e8296b 392 Pfam PF04545 Sigma-70, region 4 326 378 1.0E-16 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS13185 4ac5c6ced8cdc644d95fcf6246e8296b 392 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 152 380 1.8E-35 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS13185 4ac5c6ced8cdc644d95fcf6246e8296b 392 PANTHER PTHR30603 69 387 4.4E-112 T 23-04-2016 RR42_RS13185 4ac5c6ced8cdc644d95fcf6246e8296b 392 PANTHER PTHR30603:SF15 69 387 4.4E-112 T 23-04-2016 RR42_RS13185 4ac5c6ced8cdc644d95fcf6246e8296b 392 PRINTS PR00046 Major sigma-70 factor signature 204 212 5.6E-24 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS13185 4ac5c6ced8cdc644d95fcf6246e8296b 392 PRINTS PR00046 Major sigma-70 factor signature 351 366 5.6E-24 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS13185 4ac5c6ced8cdc644d95fcf6246e8296b 392 PRINTS PR00046 Major sigma-70 factor signature 180 193 5.6E-24 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS13185 4ac5c6ced8cdc644d95fcf6246e8296b 392 PRINTS PR00046 Major sigma-70 factor signature 366 377 5.6E-24 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS13185 4ac5c6ced8cdc644d95fcf6246e8296b 392 PRINTS PR00046 Major sigma-70 factor signature 330 342 5.6E-24 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS13185 4ac5c6ced8cdc644d95fcf6246e8296b 392 Gene3D G3DSA:1.10.10.10 229 280 1.8E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS13185 4ac5c6ced8cdc644d95fcf6246e8296b 392 Gene3D G3DSA:1.10.10.10 322 387 4.8E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS13185 4ac5c6ced8cdc644d95fcf6246e8296b 392 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 180 193 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS13185 4ac5c6ced8cdc644d95fcf6246e8296b 392 SUPERFAMILY SSF88659 289 386 1.39E-25 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS13185 4ac5c6ced8cdc644d95fcf6246e8296b 392 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 77 392 38.008 T 23-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS19905 d5a1bd3ad8b6c36593c4c31e71013eea 125 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 11 121 6.6E-39 T 23-04-2016 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 RR42_RS19905 d5a1bd3ad8b6c36593c4c31e71013eea 125 Gene3D G3DSA:3.60.90.10 11 121 2.3E-38 T 23-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 RR42_RS19905 d5a1bd3ad8b6c36593c4c31e71013eea 125 SUPERFAMILY SSF56276 11 121 2.12E-33 T 23-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 RR42_RS19905 d5a1bd3ad8b6c36593c4c31e71013eea 125 PANTHER PTHR33866 2 121 9.4E-34 T 23-04-2016 RR42_RS19905 d5a1bd3ad8b6c36593c4c31e71013eea 125 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 9 125 26.797 T 23-04-2016 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 RR42_RS19905 d5a1bd3ad8b6c36593c4c31e71013eea 125 PANTHER PTHR33866:SF2 2 121 9.4E-34 T 23-04-2016 RR42_RS19905 d5a1bd3ad8b6c36593c4c31e71013eea 125 Pfam PF02675 S-adenosylmethionine decarboxylase 15 121 3.8E-35 T 23-04-2016 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 RR42_RS00205 8c624168d725e42d209e3ce78a536fc9 261 Pfam PF00005 ABC transporter 22 185 1.8E-23 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS00205 8c624168d725e42d209e3ce78a536fc9 261 Gene3D G3DSA:3.40.50.300 3 256 3.4E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS00205 8c624168d725e42d209e3ce78a536fc9 261 PANTHER PTHR24220 8 113 8.5E-87 T 23-04-2016 RR42_RS00205 8c624168d725e42d209e3ce78a536fc9 261 PANTHER PTHR24220 129 260 8.5E-87 T 23-04-2016 RR42_RS00205 8c624168d725e42d209e3ce78a536fc9 261 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 235 257 1.1E-6 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RR42_RS00205 8c624168d725e42d209e3ce78a536fc9 261 SMART SM00382 31 234 5.1E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS00205 8c624168d725e42d209e3ce78a536fc9 261 SUPERFAMILY SSF52540 5 257 7.67E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS00205 8c624168d725e42d209e3ce78a536fc9 261 PANTHER PTHR24220:SF358 8 113 8.5E-87 T 23-04-2016 RR42_RS00205 8c624168d725e42d209e3ce78a536fc9 261 PANTHER PTHR24220:SF358 129 260 8.5E-87 T 23-04-2016 RR42_RS05195 b102cf0080a63cfc4697b9510e1abd58 338 PANTHER PTHR11556 4 337 1.2E-159 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 RR42_RS05195 b102cf0080a63cfc4697b9510e1abd58 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 205 232 1.1E-73 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RR42_RS05195 b102cf0080a63cfc4697b9510e1abd58 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 29 56 1.1E-73 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RR42_RS05195 b102cf0080a63cfc4697b9510e1abd58 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 179 202 1.1E-73 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RR42_RS05195 b102cf0080a63cfc4697b9510e1abd58 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 1.1E-73 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RR42_RS05195 b102cf0080a63cfc4697b9510e1abd58 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 148 171 1.1E-73 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RR42_RS05195 b102cf0080a63cfc4697b9510e1abd58 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 66 92 1.1E-73 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RR42_RS05195 b102cf0080a63cfc4697b9510e1abd58 338 Gene3D G3DSA:3.30.540.10 4 194 1.4E-76 T 23-04-2016 RR42_RS05195 b102cf0080a63cfc4697b9510e1abd58 338 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 333 47.773 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 RR42_RS05195 b102cf0080a63cfc4697b9510e1abd58 338 PIRSF PIRSF500210 1 336 3.5E-130 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RR42_RS05195 b102cf0080a63cfc4697b9510e1abd58 338 Gene3D G3DSA:3.40.190.80 196 333 1.3E-59 T 23-04-2016 RR42_RS05195 b102cf0080a63cfc4697b9510e1abd58 338 PIRSF PIRSF000904 1 337 1.0E-128 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 RR42_RS05195 b102cf0080a63cfc4697b9510e1abd58 338 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 5 193 8.2E-63 T 23-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RR42_RS05195 b102cf0080a63cfc4697b9510e1abd58 338 SUPERFAMILY SSF56655 2 331 1.04E-118 T 23-04-2016 RR42_RS20360 0167ed59f7cc604a68b3f42c7df2db4b 159 PANTHER PTHR30154:SF28 1 157 5.3E-52 T 23-04-2016 RR42_RS20360 0167ed59f7cc604a68b3f42c7df2db4b 159 Pfam PF13404 AsnC-type helix-turn-helix domain 6 47 6.9E-14 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS20360 0167ed59f7cc604a68b3f42c7df2db4b 159 SUPERFAMILY SSF54909 66 155 2.41E-19 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RR42_RS20360 0167ed59f7cc604a68b3f42c7df2db4b 159 Gene3D G3DSA:1.10.10.10 1 57 7.3E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS20360 0167ed59f7cc604a68b3f42c7df2db4b 159 SUPERFAMILY SSF46785 5 65 1.18E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS20360 0167ed59f7cc604a68b3f42c7df2db4b 159 Gene3D G3DSA:3.30.70.920 59 143 4.9E-26 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RR42_RS20360 0167ed59f7cc604a68b3f42c7df2db4b 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 3.5E-10 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS20360 0167ed59f7cc604a68b3f42c7df2db4b 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 3.5E-10 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS20360 0167ed59f7cc604a68b3f42c7df2db4b 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 3.5E-10 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS20360 0167ed59f7cc604a68b3f42c7df2db4b 159 Pfam PF01037 Lrp/AsnC ligand binding domain 74 144 2.0E-20 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RR42_RS20360 0167ed59f7cc604a68b3f42c7df2db4b 159 SMART SM00344 6 115 1.6E-31 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RR42_RS20360 0167ed59f7cc604a68b3f42c7df2db4b 159 PANTHER PTHR30154 1 157 5.3E-52 T 23-04-2016 RR42_RS17750 69646aeda0bf9031923e96bfbf39fded 444 PANTHER PTHR23508 17 430 5.6E-148 T 23-04-2016 RR42_RS17750 69646aeda0bf9031923e96bfbf39fded 444 SUPERFAMILY SSF103473 20 429 5.1E-67 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS17750 69646aeda0bf9031923e96bfbf39fded 444 ProSitePatterns PS00216 Sugar transport proteins signature 1. 84 100 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RR42_RS17750 69646aeda0bf9031923e96bfbf39fded 444 ProSitePatterns PS00216 Sugar transport proteins signature 1. 301 318 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RR42_RS17750 69646aeda0bf9031923e96bfbf39fded 444 ProSitePatterns PS00217 Sugar transport proteins signature 2. 134 159 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RR42_RS17750 69646aeda0bf9031923e96bfbf39fded 444 Pfam PF07690 Major Facilitator Superfamily 34 388 9.3E-31 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS17750 69646aeda0bf9031923e96bfbf39fded 444 Gene3D G3DSA:1.20.1250.20 21 227 1.1E-25 T 23-04-2016 RR42_RS17750 69646aeda0bf9031923e96bfbf39fded 444 Gene3D G3DSA:1.20.1250.20 245 427 1.1E-19 T 23-04-2016 RR42_RS17750 69646aeda0bf9031923e96bfbf39fded 444 PANTHER PTHR23508:SF11 17 430 5.6E-148 T 23-04-2016 RR42_RS16935 a792469bb9fdc69aafaa8f41898e96fc 290 PANTHER PTHR30151 41 287 3.6E-92 T 23-04-2016 RR42_RS16935 a792469bb9fdc69aafaa8f41898e96fc 290 SUPERFAMILY SSF161098 92 273 1.16E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS16935 a792469bb9fdc69aafaa8f41898e96fc 290 Gene3D G3DSA:1.10.3720.10 87 283 6.1E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS16935 a792469bb9fdc69aafaa8f41898e96fc 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 283 7.2E-23 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS16935 a792469bb9fdc69aafaa8f41898e96fc 290 PANTHER PTHR30151:SF0 41 287 3.6E-92 T 23-04-2016 RR42_RS10230 e79512e52733eb6e0afa33baa73b482b 603 PANTHER PTHR10909 5 484 2.0E-148 T 23-04-2016 RR42_RS10230 e79512e52733eb6e0afa33baa73b482b 603 SUPERFAMILY SSF47203 300 479 4.51E-41 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS10230 e79512e52733eb6e0afa33baa73b482b 603 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 160 274 8.9E-17 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RR42_RS10230 e79512e52733eb6e0afa33baa73b482b 603 Gene3D G3DSA:1.10.540.10 34 156 1.6E-10 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS10230 e79512e52733eb6e0afa33baa73b482b 603 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 34 154 1.6E-7 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS10230 e79512e52733eb6e0afa33baa73b482b 603 Gene3D G3DSA:2.40.110.10 158 274 1.3E-24 T 23-04-2016 RR42_RS10230 e79512e52733eb6e0afa33baa73b482b 603 PANTHER PTHR10909:SF296 5 484 2.0E-148 T 23-04-2016 RR42_RS10230 e79512e52733eb6e0afa33baa73b482b 603 SUPERFAMILY SSF56645 33 275 5.37E-50 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RR42_RS10230 e79512e52733eb6e0afa33baa73b482b 603 Gene3D G3DSA:1.20.140.10 296 464 8.3E-39 T 23-04-2016 RR42_RS10230 e79512e52733eb6e0afa33baa73b482b 603 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 296 459 3.1E-21 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS10230 e79512e52733eb6e0afa33baa73b482b 603 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 475 599 1.7E-28 T 23-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RR42_RS04165 7b8df062de42b0cf965c9742a6ab111d 400 Pfam PF09594 Protein of unknown function (DUF2029) 104 326 5.5E-30 T 23-04-2016 IPR018584 Glycosyltransferase family 87 GO:0016758 RR42_RS20525 5c4867990c0b5c94a638fcbd8ae35618 222 PANTHER PTHR26402:SF151 6 212 1.1E-65 T 23-04-2016 RR42_RS20525 5c4867990c0b5c94a638fcbd8ae35618 222 SMART SM00448 6 123 2.0E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS20525 5c4867990c0b5c94a638fcbd8ae35618 222 PANTHER PTHR26402 6 212 1.1E-65 T 23-04-2016 RR42_RS20525 5c4867990c0b5c94a638fcbd8ae35618 222 SMART SM00421 151 208 3.6E-23 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS20525 5c4867990c0b5c94a638fcbd8ae35618 222 Gene3D G3DSA:1.10.10.10 157 212 1.9E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS20525 5c4867990c0b5c94a638fcbd8ae35618 222 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS20525 5c4867990c0b5c94a638fcbd8ae35618 222 Pfam PF00072 Response regulator receiver domain 8 123 4.3E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS20525 5c4867990c0b5c94a638fcbd8ae35618 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 1.4E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS20525 5c4867990c0b5c94a638fcbd8ae35618 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 1.4E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS20525 5c4867990c0b5c94a638fcbd8ae35618 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 1.4E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS20525 5c4867990c0b5c94a638fcbd8ae35618 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 208 1.3E-16 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS20525 5c4867990c0b5c94a638fcbd8ae35618 222 Gene3D G3DSA:3.40.50.2300 4 156 1.3E-34 T 23-04-2016 RR42_RS20525 5c4867990c0b5c94a638fcbd8ae35618 222 SUPERFAMILY SSF46894 137 212 2.89E-20 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS20525 5c4867990c0b5c94a638fcbd8ae35618 222 SUPERFAMILY SSF52172 5 139 7.97E-31 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS18070 f24b5bb425e2644cd357825ecb39d7ad 479 Gene3D G3DSA:3.90.190.20 316 472 3.4E-52 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RR42_RS18070 f24b5bb425e2644cd357825ecb39d7ad 479 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 7 466 3.5E-163 T 23-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS18070 f24b5bb425e2644cd357825ecb39d7ad 479 PANTHER PTHR23135 1 465 1.1E-192 T 23-04-2016 RR42_RS18070 f24b5bb425e2644cd357825ecb39d7ad 479 SUPERFAMILY SSF53244 313 469 1.12E-42 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RR42_RS18070 f24b5bb425e2644cd357825ecb39d7ad 479 Gene3D G3DSA:3.40.50.720 6 92 1.0E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS18070 f24b5bb425e2644cd357825ecb39d7ad 479 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 5 476 42.939 T 23-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS18070 f24b5bb425e2644cd357825ecb39d7ad 479 Pfam PF01225 Mur ligase family, catalytic domain 8 105 2.5E-26 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS18070 f24b5bb425e2644cd357825ecb39d7ad 479 Gene3D G3DSA:3.40.1190.10 94 315 1.2E-81 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS18070 f24b5bb425e2644cd357825ecb39d7ad 479 Pfam PF08245 Mur ligase middle domain 110 294 1.3E-27 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS18070 f24b5bb425e2644cd357825ecb39d7ad 479 SUPERFAMILY SSF53623 91 312 2.49E-70 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS18070 f24b5bb425e2644cd357825ecb39d7ad 479 SUPERFAMILY SSF51984 6 92 9.29E-29 T 23-04-2016 RR42_RS18070 f24b5bb425e2644cd357825ecb39d7ad 479 PANTHER PTHR23135:SF5 1 465 1.1E-192 T 23-04-2016 RR42_RS18070 f24b5bb425e2644cd357825ecb39d7ad 479 Pfam PF02875 Mur ligase family, glutamate ligase domain 315 414 1.3E-17 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RR42_RS05700 294aae4339a4faff6aca4207b750fcf2 129 SMART SM00530 12 67 4.2E-14 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RR42_RS05700 294aae4339a4faff6aca4207b750fcf2 129 Pfam PF01381 Helix-turn-helix 13 66 5.8E-16 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RR42_RS05700 294aae4339a4faff6aca4207b750fcf2 129 SUPERFAMILY SSF47413 4 72 4.02E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS05700 294aae4339a4faff6aca4207b750fcf2 129 Gene3D G3DSA:1.10.260.40 6 73 1.5E-19 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS02095 9db87aee6de13bfc18fd9a28c18614ab 214 Gene3D G3DSA:2.60.450.10 35 186 1.2E-33 T 23-04-2016 RR42_RS02095 9db87aee6de13bfc18fd9a28c18614ab 214 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 35 189 3.3E-36 T 23-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 RR42_RS02095 9db87aee6de13bfc18fd9a28c18614ab 214 Pfam PF03968 OstA-like protein 46 163 5.4E-27 T 23-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal RR42_RS02095 9db87aee6de13bfc18fd9a28c18614ab 214 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 16 190 25.669 T 23-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 RR42_RS02095 9db87aee6de13bfc18fd9a28c18614ab 214 PANTHER PTHR36504 9 208 3.2E-17 T 23-04-2016 RR42_RS03235 8f3e4dbd2d357327f1f1679afe82e4f5 328 Gene3D G3DSA:3.90.870.10 4 202 6.9E-72 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RR42_RS03235 8f3e4dbd2d357327f1f1679afe82e4f5 328 SUPERFAMILY SSF55821 8 208 1.86E-57 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RR42_RS03235 8f3e4dbd2d357327f1f1679afe82e4f5 328 PIRSF PIRSF004930 1 327 1.8E-96 T 23-04-2016 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 RR42_RS03235 8f3e4dbd2d357327f1f1679afe82e4f5 328 Pfam PF01300 Telomere recombination 16 197 3.4E-52 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 RR42_RS03235 8f3e4dbd2d357327f1f1679afe82e4f5 328 PANTHER PTHR17490 3 328 1.2E-76 T 23-04-2016 RR42_RS03235 8f3e4dbd2d357327f1f1679afe82e4f5 328 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 5 208 9.6E-52 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 RR42_RS03235 8f3e4dbd2d357327f1f1679afe82e4f5 328 Pfam PF03481 Putative GTP-binding controlling metal-binding 199 324 3.6E-18 T 23-04-2016 IPR005145 Putative GTP-binding controlling metal-binding domain RR42_RS19255 a9897eaa2c4ab88f9572e74551c81821 216 PANTHER PTHR11229 4 215 2.0E-105 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19255 a9897eaa2c4ab88f9572e74551c81821 216 SUPERFAMILY SSF50447 2 214 1.85E-76 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RR42_RS19255 a9897eaa2c4ab88f9572e74551c81821 216 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 210 38.526 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19255 a9897eaa2c4ab88f9572e74551c81821 216 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 206 4.4E-84 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19255 a9897eaa2c4ab88f9572e74551c81821 216 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 23-04-2016 IPR019926 Ribosomal protein L3, conserved site RR42_RS19255 a9897eaa2c4ab88f9572e74551c81821 216 Pfam PF00297 Ribosomal protein L3 65 185 6.6E-16 T 23-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19255 a9897eaa2c4ab88f9572e74551c81821 216 Gene3D G3DSA:4.10.960.10 81 160 4.5E-27 T 23-04-2016 RR42_RS19255 a9897eaa2c4ab88f9572e74551c81821 216 Gene3D G3DSA:2.40.30.10 161 213 1.1E-8 T 23-04-2016 RR42_RS19255 a9897eaa2c4ab88f9572e74551c81821 216 Gene3D G3DSA:2.40.30.10 4 33 1.1E-8 T 23-04-2016 RR42_RS00785 2db13d92e31b825795629eaa6694b0bc 210 Gene3D G3DSA:1.10.10.10 120 209 7.3E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS00785 2db13d92e31b825795629eaa6694b0bc 210 SMART SM00448 2 115 2.9E-32 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS00785 2db13d92e31b825795629eaa6694b0bc 210 Pfam PF00072 Response regulator receiver domain 4 116 1.8E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS00785 2db13d92e31b825795629eaa6694b0bc 210 SMART SM00421 146 203 1.9E-18 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS00785 2db13d92e31b825795629eaa6694b0bc 210 Gene3D G3DSA:3.40.50.2300 1 119 1.0E-37 T 23-04-2016 RR42_RS00785 2db13d92e31b825795629eaa6694b0bc 210 SUPERFAMILY SSF52172 1 133 5.69E-36 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS00785 2db13d92e31b825795629eaa6694b0bc 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS00785 2db13d92e31b825795629eaa6694b0bc 210 PANTHER PTHR26402 2 209 3.8E-67 T 23-04-2016 RR42_RS00785 2db13d92e31b825795629eaa6694b0bc 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 6.6E-15 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS00785 2db13d92e31b825795629eaa6694b0bc 210 SUPERFAMILY SSF46894 142 209 2.75E-18 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS00785 2db13d92e31b825795629eaa6694b0bc 210 PANTHER PTHR26402:SF151 2 209 3.8E-67 T 23-04-2016 RR42_RS00785 2db13d92e31b825795629eaa6694b0bc 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 5.172591E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS00785 2db13d92e31b825795629eaa6694b0bc 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 5.172591E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS00785 2db13d92e31b825795629eaa6694b0bc 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 5.172591E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS18365 1248b15237aa6d57c15555c3ed89f47d 363 PANTHER PTHR23305:SF12 1 363 1.3E-203 T 23-04-2016 RR42_RS18365 1248b15237aa6d57c15555c3ed89f47d 363 Gene3D G3DSA:3.40.50.300 4 130 1.8E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18365 1248b15237aa6d57c15555c3ed89f47d 363 Gene3D G3DSA:3.40.50.300 201 265 1.8E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18365 1248b15237aa6d57c15555c3ed89f47d 363 PIRSF PIRSF006641 1 363 9.7E-153 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RR42_RS18365 1248b15237aa6d57c15555c3ed89f47d 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 1.5E-156 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RR42_RS18365 1248b15237aa6d57c15555c3ed89f47d 363 Gene3D G3DSA:1.10.150.300 131 200 1.8E-25 T 23-04-2016 IPR023192 TGS-like domain RR42_RS18365 1248b15237aa6d57c15555c3ed89f47d 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 4.9E-22 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RR42_RS18365 1248b15237aa6d57c15555c3ed89f47d 363 PANTHER PTHR23305 1 363 1.3E-203 T 23-04-2016 RR42_RS18365 1248b15237aa6d57c15555c3ed89f47d 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.3E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RR42_RS18365 1248b15237aa6d57c15555c3ed89f47d 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.3E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RR42_RS18365 1248b15237aa6d57c15555c3ed89f47d 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.3E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RR42_RS18365 1248b15237aa6d57c15555c3ed89f47d 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.3E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RR42_RS18365 1248b15237aa6d57c15555c3ed89f47d 363 SUPERFAMILY SSF52540 3 301 2.68E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18365 1248b15237aa6d57c15555c3ed89f47d 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 44.314 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RR42_RS18365 1248b15237aa6d57c15555c3ed89f47d 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.5E-39 T 23-04-2016 IPR013029 Domain of unknown function DUF933 RR42_RS18365 1248b15237aa6d57c15555c3ed89f47d 363 SUPERFAMILY SSF81271 279 359 6.98E-36 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RR42_RS18365 1248b15237aa6d57c15555c3ed89f47d 363 Gene3D G3DSA:3.10.20.30 266 363 3.2E-49 T 23-04-2016 IPR012675 Beta-grasp domain RR42_RS03135 da7248e3c7a038b9a04fa24d6390ab25 199 SUPERFAMILY SSF55486 17 195 7.45E-21 T 23-04-2016 RR42_RS03135 da7248e3c7a038b9a04fa24d6390ab25 199 Pfam PF14521 Lysine-specific metallo-endopeptidase 45 194 3.2E-19 T 23-04-2016 IPR029463 Lysine-specific metallo-endopeptidase GO:0004222 RR42_RS03135 da7248e3c7a038b9a04fa24d6390ab25 199 Gene3D G3DSA:3.40.390.10 13 194 1.6E-34 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RR42_RS03135 da7248e3c7a038b9a04fa24d6390ab25 199 SMART SM01351 42 195 3.8E-52 T 23-04-2016 IPR029463 Lysine-specific metallo-endopeptidase GO:0004222 RR42_RS12730 e0887cb4d0889d4556a68c4280309c17 480 SUPERFAMILY SSF56954 9 464 1.31E-97 T 23-04-2016 RR42_RS12730 e0887cb4d0889d4556a68c4280309c17 480 PANTHER PTHR30203:SF3 43 480 3.5E-82 T 23-04-2016 RR42_RS12730 e0887cb4d0889d4556a68c4280309c17 480 PANTHER PTHR30203 43 480 3.5E-82 T 23-04-2016 RR42_RS12730 e0887cb4d0889d4556a68c4280309c17 480 Gene3D G3DSA:1.20.1600.10 58 464 1.4E-97 T 23-04-2016 RR42_RS12730 e0887cb4d0889d4556a68c4280309c17 480 Pfam PF02321 Outer membrane efflux protein 71 253 1.4E-29 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RR42_RS12730 e0887cb4d0889d4556a68c4280309c17 480 Pfam PF02321 Outer membrane efflux protein 279 459 4.2E-25 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RR42_RS12730 e0887cb4d0889d4556a68c4280309c17 480 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 19 461 1.4E-94 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RR42_RS31625 d7858f2ed22422fb9c0f865d6f4fb1b5 248 Pfam PF02566 OsmC-like protein 17 111 5.6E-10 T 23-04-2016 IPR003718 OsmC/Ohr family RR42_RS31625 d7858f2ed22422fb9c0f865d6f4fb1b5 248 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 144 241 6.4E-22 T 23-04-2016 IPR003776 YcaO-like domain RR42_RS31625 d7858f2ed22422fb9c0f865d6f4fb1b5 248 Gene3D G3DSA:3.30.300.20 4 112 6.0E-25 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta RR42_RS31625 d7858f2ed22422fb9c0f865d6f4fb1b5 248 SUPERFAMILY SSF82784 3 110 1.13E-17 T 23-04-2016 IPR003718 OsmC/Ohr family RR42_RS31625 d7858f2ed22422fb9c0f865d6f4fb1b5 248 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 190 246 2.1E-7 T 23-04-2016 IPR003776 YcaO-like domain RR42_RS31625 d7858f2ed22422fb9c0f865d6f4fb1b5 248 PANTHER PTHR39624 7 127 1.2E-16 T 23-04-2016 RR42_RS14770 42e71161e7c5837f12bbe1ed8f964469 216 SUPERFAMILY SSF53098 17 192 6.51E-46 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS14770 42e71161e7c5837f12bbe1ed8f964469 216 SMART SM00479 20 193 1.6E-20 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RR42_RS14770 42e71161e7c5837f12bbe1ed8f964469 216 Gene3D G3DSA:3.30.420.10 17 192 2.6E-73 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS14770 42e71161e7c5837f12bbe1ed8f964469 216 PANTHER PTHR11046:SF1 14 195 9.1E-106 T 23-04-2016 RR42_RS14770 42e71161e7c5837f12bbe1ed8f964469 216 PANTHER PTHR11046 14 195 9.1E-106 T 23-04-2016 RR42_RS14770 42e71161e7c5837f12bbe1ed8f964469 216 Pfam PF00929 Exonuclease 22 183 4.9E-33 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RR42_RS14770 42e71161e7c5837f12bbe1ed8f964469 216 Hamap MF_00045 Oligoribonuclease [orn]. 16 194 43.541 T 23-04-2016 IPR022894 Oligoribonuclease GO:0016788 RR42_RS18830 6ee413be71f5136c741fdd1e43914f33 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 5.6E-11 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RR42_RS18830 6ee413be71f5136c741fdd1e43914f33 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 103 112 5.6E-11 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RR42_RS18830 6ee413be71f5136c741fdd1e43914f33 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 94 102 5.6E-11 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RR42_RS18830 6ee413be71f5136c741fdd1e43914f33 143 PANTHER PTHR30266:SF2 1 142 4.8E-46 T 23-04-2016 RR42_RS18830 6ee413be71f5136c741fdd1e43914f33 143 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 142 25.495 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RR42_RS18830 6ee413be71f5136c741fdd1e43914f33 143 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 140 1.8E-38 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RR42_RS18830 6ee413be71f5136c741fdd1e43914f33 143 SUPERFAMILY SSF81330 12 135 4.18E-35 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RR42_RS18830 6ee413be71f5136c741fdd1e43914f33 143 PANTHER PTHR30266 1 142 4.8E-46 T 23-04-2016 RR42_RS18830 6ee413be71f5136c741fdd1e43914f33 143 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 23-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site RR42_RS18830 6ee413be71f5136c741fdd1e43914f33 143 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 139 2.1E-42 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RR42_RS19285 5d43d9aba72cd3c6369477972bb14339 102 PANTHER PTHR11700 1 102 2.4E-50 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RR42_RS19285 5d43d9aba72cd3c6369477972bb14339 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 23-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19285 5d43d9aba72cd3c6369477972bb14339 102 SUPERFAMILY SSF54999 5 102 4.19E-38 T 23-04-2016 IPR027486 Ribosomal protein S10 domain RR42_RS19285 5d43d9aba72cd3c6369477972bb14339 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 102 4.4E-46 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RR42_RS19285 5d43d9aba72cd3c6369477972bb14339 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 4.9E-18 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RR42_RS19285 5d43d9aba72cd3c6369477972bb14339 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 4.9E-18 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RR42_RS19285 5d43d9aba72cd3c6369477972bb14339 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 4.9E-18 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RR42_RS19285 5d43d9aba72cd3c6369477972bb14339 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.729 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RR42_RS19285 5d43d9aba72cd3c6369477972bb14339 102 SMART SM01403 7 101 6.0E-57 T 23-04-2016 IPR027486 Ribosomal protein S10 domain RR42_RS19285 5d43d9aba72cd3c6369477972bb14339 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 9.6E-36 T 23-04-2016 IPR027486 Ribosomal protein S10 domain RR42_RS19285 5d43d9aba72cd3c6369477972bb14339 102 Gene3D G3DSA:3.30.70.600 3 102 5.4E-44 T 23-04-2016 IPR027486 Ribosomal protein S10 domain RR42_RS20410 df519737603fd31507b93a00d7c70c13 296 SUPERFAMILY SSF103481 185 280 1.11E-8 T 23-04-2016 RR42_RS20410 df519737603fd31507b93a00d7c70c13 296 PANTHER PTHR22911:SF41 3 295 7.9E-118 T 23-04-2016 RR42_RS20410 df519737603fd31507b93a00d7c70c13 296 Pfam PF00892 EamA-like transporter family 3 139 2.0E-17 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS20410 df519737603fd31507b93a00d7c70c13 296 SUPERFAMILY SSF103481 37 140 1.44E-13 T 23-04-2016 RR42_RS20410 df519737603fd31507b93a00d7c70c13 296 TIGRFAM TIGR00688 rarD: protein RarD 3 255 1.4E-65 T 23-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 RR42_RS20410 df519737603fd31507b93a00d7c70c13 296 PANTHER PTHR22911 3 295 7.9E-118 T 23-04-2016 RR42_RS13035 904dfe466cde53c9bb22eb61f6820a2a 478 Gene3D G3DSA:3.40.630.30 333 477 2.5E-34 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS13035 904dfe466cde53c9bb22eb61f6820a2a 478 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 44 478 212.204 T 23-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 RR42_RS13035 904dfe466cde53c9bb22eb61f6820a2a 478 Pfam PF00696 Amino acid kinase family 66 297 3.2E-29 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RR42_RS13035 904dfe466cde53c9bb22eb61f6820a2a 478 Pfam PF00583 Acetyltransferase (GNAT) family 377 449 1.6E-7 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RR42_RS13035 904dfe466cde53c9bb22eb61f6820a2a 478 PANTHER PTHR30602 48 478 3.0E-160 T 23-04-2016 RR42_RS13035 904dfe466cde53c9bb22eb61f6820a2a 478 SUPERFAMILY SSF55729 333 455 2.44E-18 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS13035 904dfe466cde53c9bb22eb61f6820a2a 478 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 49 478 2.1E-203 T 23-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 RR42_RS13035 904dfe466cde53c9bb22eb61f6820a2a 478 Gene3D G3DSA:3.40.1160.10 64 326 3.5E-65 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RR42_RS13035 904dfe466cde53c9bb22eb61f6820a2a 478 SUPERFAMILY SSF53633 46 328 6.15E-69 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RR42_RS13035 904dfe466cde53c9bb22eb61f6820a2a 478 PIRSF PIRSF000423 41 478 1.3E-185 T 23-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 RR42_RS01275 fd40ca8161c03ee7e7f7c46f6cdd3a5b 470 PIRSF PIRSF036492 1 470 1.8E-154 T 23-04-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 RR42_RS01275 fd40ca8161c03ee7e7f7c46f6cdd3a5b 470 PANTHER PTHR11699 3 470 1.0E-162 T 23-04-2016 RR42_RS01275 fd40ca8161c03ee7e7f7c46f6cdd3a5b 470 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 241 252 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RR42_RS01275 fd40ca8161c03ee7e7f7c46f6cdd3a5b 470 SUPERFAMILY SSF53720 6 443 6.28E-116 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RR42_RS01275 fd40ca8161c03ee7e7f7c46f6cdd3a5b 470 Gene3D G3DSA:3.40.309.10 227 418 2.0E-55 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RR42_RS01275 fd40ca8161c03ee7e7f7c46f6cdd3a5b 470 Gene3D G3DSA:3.40.605.10 6 226 1.5E-52 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RR42_RS01275 fd40ca8161c03ee7e7f7c46f6cdd3a5b 470 Pfam PF00171 Aldehyde dehydrogenase family 7 439 1.8E-87 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RR42_RS01275 fd40ca8161c03ee7e7f7c46f6cdd3a5b 470 PANTHER PTHR11699:SF15 3 470 1.0E-162 T 23-04-2016 RR42_RS01275 fd40ca8161c03ee7e7f7c46f6cdd3a5b 470 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 213 220 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RR42_RS09635 ea3c9457315d7657665d65586f4fd5f7 258 Pfam PF03988 Repeat of Unknown Function (DUF347) 198 247 7.1E-11 T 23-04-2016 IPR007136 Protein of unknown function DUF347 RR42_RS09635 ea3c9457315d7657665d65586f4fd5f7 258 Pfam PF03988 Repeat of Unknown Function (DUF347) 78 125 1.9E-13 T 23-04-2016 IPR007136 Protein of unknown function DUF347 RR42_RS09635 ea3c9457315d7657665d65586f4fd5f7 258 Pfam PF03988 Repeat of Unknown Function (DUF347) 144 194 5.0E-17 T 23-04-2016 IPR007136 Protein of unknown function DUF347 RR42_RS09635 ea3c9457315d7657665d65586f4fd5f7 258 Pfam PF03988 Repeat of Unknown Function (DUF347) 23 73 1.0E-19 T 23-04-2016 IPR007136 Protein of unknown function DUF347 RR42_RS04440 8efdc434a551f3a81779eecb93a12e5b 219 PRINTS PR01021 OMPA domain signature 134 149 1.9E-19 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RR42_RS04440 8efdc434a551f3a81779eecb93a12e5b 219 PRINTS PR01021 OMPA domain signature 149 165 1.9E-19 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RR42_RS04440 8efdc434a551f3a81779eecb93a12e5b 219 PRINTS PR01021 OMPA domain signature 104 126 1.9E-19 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RR42_RS04440 8efdc434a551f3a81779eecb93a12e5b 219 SUPERFAMILY SSF103088 92 212 5.36E-32 T 23-04-2016 IPR006665 OmpA-like domain RR42_RS04440 8efdc434a551f3a81779eecb93a12e5b 219 PANTHER PTHR30128 69 218 7.5E-28 T 23-04-2016 RR42_RS04440 8efdc434a551f3a81779eecb93a12e5b 219 Pfam PF00691 OmpA family 103 188 3.8E-19 T 23-04-2016 IPR006665 OmpA-like domain RR42_RS04440 8efdc434a551f3a81779eecb93a12e5b 219 Gene3D G3DSA:3.30.1330.60 89 213 2.9E-36 T 23-04-2016 IPR006665 OmpA-like domain RR42_RS00190 3269756c8801aaf95498fab1a3ad50ac 393 Gene3D G3DSA:3.40.50.2300 33 232 1.4E-41 T 23-04-2016 RR42_RS00190 3269756c8801aaf95498fab1a3ad50ac 393 Pfam PF13458 Periplasmic binding protein 34 360 5.4E-44 T 23-04-2016 IPR028081 Leucine-binding protein domain RR42_RS00190 3269756c8801aaf95498fab1a3ad50ac 393 PANTHER PTHR30483 1 379 1.8E-57 T 23-04-2016 RR42_RS00190 3269756c8801aaf95498fab1a3ad50ac 393 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 34 50 4.8E-7 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RR42_RS00190 3269756c8801aaf95498fab1a3ad50ac 393 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 263 281 4.8E-7 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RR42_RS00190 3269756c8801aaf95498fab1a3ad50ac 393 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 74 92 4.8E-7 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RR42_RS00190 3269756c8801aaf95498fab1a3ad50ac 393 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 340 355 4.8E-7 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RR42_RS00190 3269756c8801aaf95498fab1a3ad50ac 393 SUPERFAMILY SSF53822 32 378 6.73E-70 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RR42_RS00190 3269756c8801aaf95498fab1a3ad50ac 393 PANTHER PTHR30483:SF6 1 379 1.8E-57 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RR42_RS05615 2e77083279e991f267838c534432d36f 433 Gene3D G3DSA:1.20.1250.20 218 413 2.6E-17 T 23-04-2016 RR42_RS05615 2e77083279e991f267838c534432d36f 433 PANTHER PTHR11662:SF277 7 414 4.2E-85 T 23-04-2016 RR42_RS05615 2e77083279e991f267838c534432d36f 433 Gene3D G3DSA:1.20.1250.20 13 196 7.6E-26 T 23-04-2016 RR42_RS05615 2e77083279e991f267838c534432d36f 433 Pfam PF07690 Major Facilitator Superfamily 22 317 6.8E-32 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS05615 2e77083279e991f267838c534432d36f 433 PANTHER PTHR11662 7 414 4.2E-85 T 23-04-2016 RR42_RS05615 2e77083279e991f267838c534432d36f 433 SUPERFAMILY SSF103473 9 414 3.01E-58 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS18355 3a00cceaad23692c881f3a3124c6f694 249 SUPERFAMILY SSF54423 41 94 8.44E-12 T 23-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal RR42_RS18355 3a00cceaad23692c881f3a3124c6f694 249 Pfam PF13098 Thioredoxin-like domain 123 243 3.9E-29 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS18355 3a00cceaad23692c881f3a3124c6f694 249 Pfam PF10411 Disulfide bond isomerase protein N-terminus 40 93 9.3E-20 T 23-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal RR42_RS18355 3a00cceaad23692c881f3a3124c6f694 249 SUPERFAMILY SSF52833 103 245 3.58E-35 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS18355 3a00cceaad23692c881f3a3124c6f694 249 PANTHER PTHR35272 8 244 4.7E-37 T 23-04-2016 RR42_RS18355 3a00cceaad23692c881f3a3124c6f694 249 Gene3D G3DSA:3.10.450.70 37 98 3.4E-17 T 23-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal RR42_RS18355 3a00cceaad23692c881f3a3124c6f694 249 Gene3D G3DSA:3.40.30.10 119 246 9.0E-38 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS18355 3a00cceaad23692c881f3a3124c6f694 249 ProSitePatterns PS00194 Thioredoxin family active site. 130 148 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RR42_RS01670 be3e0e2879ff02b494e6f54183621be7 397 Gene3D G3DSA:3.40.50.150 186 395 1.2E-57 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS01670 be3e0e2879ff02b494e6f54183621be7 397 SUPERFAMILY SSF88697 1 71 7.46E-20 T 23-04-2016 IPR015947 PUA-like domain RR42_RS01670 be3e0e2879ff02b494e6f54183621be7 397 SUPERFAMILY SSF53335 78 393 6.08E-67 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS01670 be3e0e2879ff02b494e6f54183621be7 397 Gene3D G3DSA:3.30.750.80 73 180 3.3E-36 T 23-04-2016 RR42_RS01670 be3e0e2879ff02b494e6f54183621be7 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 174 352 4.8E-29 T 23-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 RR42_RS01670 be3e0e2879ff02b494e6f54183621be7 397 PANTHER PTHR11061 3 397 4.5E-105 T 23-04-2016 RR42_RS01670 be3e0e2879ff02b494e6f54183621be7 397 Gene3D G3DSA:2.30.130.10 1 71 7.7E-28 T 23-04-2016 IPR015947 PUA-like domain RR42_RS01670 be3e0e2879ff02b494e6f54183621be7 397 SMART SM00359 2 87 2.0E-16 T 23-04-2016 IPR002478 PUA domain GO:0003723 RR42_RS01670 be3e0e2879ff02b494e6f54183621be7 397 PANTHER PTHR11061:SF12 3 397 4.5E-105 T 23-04-2016 RR42_RS03210 b3fc2352bd712b991bdf54ca60e91348 478 PANTHER PTHR11817 1 477 2.5E-227 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS03210 b3fc2352bd712b991bdf54ca60e91348 478 ProSitePatterns PS00110 Pyruvate kinase active site signature. 217 229 - T 23-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS03210 b3fc2352bd712b991bdf54ca60e91348 478 PANTHER PTHR11817:SF17 1 477 2.5E-227 T 23-04-2016 RR42_RS03210 b3fc2352bd712b991bdf54ca60e91348 478 Pfam PF00224 Pyruvate kinase, barrel domain 3 342 9.9E-114 T 23-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS03210 b3fc2352bd712b991bdf54ca60e91348 478 Gene3D G3DSA:3.20.20.60 3 73 9.2E-94 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS03210 b3fc2352bd712b991bdf54ca60e91348 478 Gene3D G3DSA:3.20.20.60 168 330 9.2E-94 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS03210 b3fc2352bd712b991bdf54ca60e91348 478 Gene3D G3DSA:2.40.33.10 74 167 1.6E-25 T 23-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS03210 b3fc2352bd712b991bdf54ca60e91348 478 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 476 4.2E-153 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS03210 b3fc2352bd712b991bdf54ca60e91348 478 Pfam PF02887 Pyruvate kinase, alpha/beta domain 362 474 7.4E-29 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS03210 b3fc2352bd712b991bdf54ca60e91348 478 SUPERFAMILY SSF50800 71 164 4.01E-24 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain RR42_RS03210 b3fc2352bd712b991bdf54ca60e91348 478 Gene3D G3DSA:3.40.1380.20 331 476 7.3E-40 T 23-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS03210 b3fc2352bd712b991bdf54ca60e91348 478 PRINTS PR01050 Pyruvate kinase family signature 317 333 4.8E-46 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS03210 b3fc2352bd712b991bdf54ca60e91348 478 PRINTS PR01050 Pyruvate kinase family signature 248 272 4.8E-46 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS03210 b3fc2352bd712b991bdf54ca60e91348 478 PRINTS PR01050 Pyruvate kinase family signature 273 297 4.8E-46 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS03210 b3fc2352bd712b991bdf54ca60e91348 478 PRINTS PR01050 Pyruvate kinase family signature 298 316 4.8E-46 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS03210 b3fc2352bd712b991bdf54ca60e91348 478 PRINTS PR01050 Pyruvate kinase family signature 60 76 4.8E-46 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS03210 b3fc2352bd712b991bdf54ca60e91348 478 PRINTS PR01050 Pyruvate kinase family signature 185 199 4.8E-46 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS03210 b3fc2352bd712b991bdf54ca60e91348 478 SUPERFAMILY SSF52935 327 477 6.54E-39 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS03210 b3fc2352bd712b991bdf54ca60e91348 478 SUPERFAMILY SSF51621 166 342 4.89E-89 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS03210 b3fc2352bd712b991bdf54ca60e91348 478 SUPERFAMILY SSF51621 2 76 4.89E-89 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS11105 deb2a0c4b62e77cd3ef24674d5a27ee0 430 PANTHER PTHR11958:SF26 1 402 2.8E-148 T 23-04-2016 IPR033380 Glutamate-aspartate symport protein GltP/GltT GO:0015293|GO:0015810|GO:0015813|GO:0016021 RR42_RS11105 deb2a0c4b62e77cd3ef24674d5a27ee0 430 PANTHER PTHR11958 1 402 2.8E-148 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS11105 deb2a0c4b62e77cd3ef24674d5a27ee0 430 Gene3D G3DSA:1.10.3860.10 2 398 6.0E-110 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS11105 deb2a0c4b62e77cd3ef24674d5a27ee0 430 PRINTS PR00173 Glutamate-aspartate symporter signature 138 160 1.1E-41 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS11105 deb2a0c4b62e77cd3ef24674d5a27ee0 430 PRINTS PR00173 Glutamate-aspartate symporter signature 41 61 1.1E-41 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS11105 deb2a0c4b62e77cd3ef24674d5a27ee0 430 PRINTS PR00173 Glutamate-aspartate symporter signature 321 340 1.1E-41 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS11105 deb2a0c4b62e77cd3ef24674d5a27ee0 430 PRINTS PR00173 Glutamate-aspartate symporter signature 186 205 1.1E-41 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS11105 deb2a0c4b62e77cd3ef24674d5a27ee0 430 PRINTS PR00173 Glutamate-aspartate symporter signature 71 96 1.1E-41 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS11105 deb2a0c4b62e77cd3ef24674d5a27ee0 430 PRINTS PR00173 Glutamate-aspartate symporter signature 286 312 1.1E-41 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS11105 deb2a0c4b62e77cd3ef24674d5a27ee0 430 PRINTS PR00173 Glutamate-aspartate symporter signature 348 368 1.1E-41 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS11105 deb2a0c4b62e77cd3ef24674d5a27ee0 430 Pfam PF00375 Sodium:dicarboxylate symporter family 2 394 3.7E-108 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS11105 deb2a0c4b62e77cd3ef24674d5a27ee0 430 SUPERFAMILY SSF118215 2 395 2.22E-109 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS06300 c5aa753d7ac88ba893b3d6fc163763bc 491 PANTHER PTHR11751 100 491 6.6E-112 T 23-04-2016 RR42_RS06300 c5aa753d7ac88ba893b3d6fc163763bc 491 SMART SM00345 25 83 5.8E-5 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS06300 c5aa753d7ac88ba893b3d6fc163763bc 491 SUPERFAMILY SSF46785 20 91 2.33E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS06300 c5aa753d7ac88ba893b3d6fc163763bc 491 Gene3D G3DSA:1.10.10.10 22 85 4.8E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS06300 c5aa753d7ac88ba893b3d6fc163763bc 491 Gene3D G3DSA:3.40.640.10 156 372 2.6E-50 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS06300 c5aa753d7ac88ba893b3d6fc163763bc 491 Pfam PF00155 Aminotransferase class I and II 149 449 3.5E-25 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RR42_RS06300 c5aa753d7ac88ba893b3d6fc163763bc 491 PANTHER PTHR11751:SF10 100 491 6.6E-112 T 23-04-2016 RR42_RS06300 c5aa753d7ac88ba893b3d6fc163763bc 491 SUPERFAMILY SSF53383 108 485 1.97E-84 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS06300 c5aa753d7ac88ba893b3d6fc163763bc 491 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 75 7.7E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS18265 e6bffb826589c944578696cb85835c98 433 Pfam PF14535 AMP-binding enzyme C-terminal domain 338 431 1.2E-24 T 23-04-2016 IPR028154 AMP-dependent ligase, C-terminal RR42_RS18265 e6bffb826589c944578696cb85835c98 433 PIRSF PIRSF006444 2 433 3.3E-201 T 23-04-2016 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716|UniPathway: UPA00930 RR42_RS18265 e6bffb826589c944578696cb85835c98 433 PANTHER PTHR24095 61 357 1.2E-178 T 23-04-2016 RR42_RS18265 e6bffb826589c944578696cb85835c98 433 Gene3D G3DSA:3.40.50.980 87 251 1.1E-13 T 23-04-2016 RR42_RS18265 e6bffb826589c944578696cb85835c98 433 Gene3D G3DSA:3.30.300.30 328 432 7.8E-35 T 23-04-2016 RR42_RS18265 e6bffb826589c944578696cb85835c98 433 Pfam PF00501 AMP-binding enzyme 83 291 1.3E-16 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS18265 e6bffb826589c944578696cb85835c98 433 TIGRFAM TIGR02155 PA_CoA_ligase: phenylacetate-CoA ligase 13 431 2.1E-206 T 23-04-2016 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716|UniPathway: UPA00930 RR42_RS18265 e6bffb826589c944578696cb85835c98 433 SUPERFAMILY SSF56801 23 387 7.46E-63 T 23-04-2016 RR42_RS18265 e6bffb826589c944578696cb85835c98 433 PANTHER PTHR24095:SF175 61 357 1.2E-178 T 23-04-2016 RR42_RS01885 89e9be7805c8be4cc67941e20d938109 204 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 37 180 4.2E-50 T 23-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 RR42_RS01885 89e9be7805c8be4cc67941e20d938109 204 PIRSF PIRSF005413 3 196 1.4E-64 T 23-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 RR42_RS01885 89e9be7805c8be4cc67941e20d938109 204 Gene3D G3DSA:2.60.370.10 63 186 2.2E-49 T 23-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain RR42_RS01885 89e9be7805c8be4cc67941e20d938109 204 SUPERFAMILY SSF110111 63 182 2.09E-45 T 23-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain RR42_RS01885 89e9be7805c8be4cc67941e20d938109 204 PANTHER PTHR21320 1 181 2.6E-43 T 23-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 RR42_RS01885 89e9be7805c8be4cc67941e20d938109 204 PANTHER PTHR21320:SF3 1 181 2.6E-43 T 23-04-2016 RR42_RS00590 ac3cb8e35ac4406f0e4c839b60e27703 501 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 14 492 94.574 T 23-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RR42_RS00590 ac3cb8e35ac4406f0e4c839b60e27703 501 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 16 492 2.3E-175 T 23-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RR42_RS00590 ac3cb8e35ac4406f0e4c839b60e27703 501 SUPERFAMILY SSF75304 9 498 9.03E-162 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RR42_RS00590 ac3cb8e35ac4406f0e4c839b60e27703 501 PANTHER PTHR11895 10 498 7.7E-219 T 23-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RR42_RS00590 ac3cb8e35ac4406f0e4c839b60e27703 501 Gene3D G3DSA:3.90.1300.10 9 498 3.1E-184 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RR42_RS00590 ac3cb8e35ac4406f0e4c839b60e27703 501 PANTHER PTHR11895:SF7 10 498 7.7E-219 T 23-04-2016 RR42_RS00590 ac3cb8e35ac4406f0e4c839b60e27703 501 Pfam PF01425 Amidase 27 481 1.2E-152 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RR42_RS00590 ac3cb8e35ac4406f0e4c839b60e27703 501 ProSitePatterns PS00571 Amidases signature. 153 184 - T 23-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RR42_RS07815 c12664814742f02e7e075ae12d0de6da 243 PANTHER PTHR24220:SF550 3 241 4.8E-136 T 23-04-2016 RR42_RS07815 c12664814742f02e7e075ae12d0de6da 243 Gene3D G3DSA:3.40.50.300 1 236 5.2E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07815 c12664814742f02e7e075ae12d0de6da 243 SUPERFAMILY SSF52540 1 235 6.51E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07815 c12664814742f02e7e075ae12d0de6da 243 SMART SM00382 26 213 4.3E-18 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS07815 c12664814742f02e7e075ae12d0de6da 243 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS07815 c12664814742f02e7e075ae12d0de6da 243 PIRSF PIRSF039085 1 241 1.5E-115 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RR42_RS07815 c12664814742f02e7e075ae12d0de6da 243 Pfam PF00005 ABC transporter 17 165 6.3E-36 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS07815 c12664814742f02e7e075ae12d0de6da 243 PANTHER PTHR24220 3 241 4.8E-136 T 23-04-2016 RR42_RS06385 fca19ae91e046e28a1e5379437ddc678 370 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 348 3.2E-87 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RR42_RS06385 fca19ae91e046e28a1e5379437ddc678 370 PANTHER PTHR22893 5 368 7.7E-169 T 23-04-2016 RR42_RS06385 fca19ae91e046e28a1e5379437ddc678 370 Gene3D G3DSA:3.20.20.70 3 368 1.8E-132 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS06385 fca19ae91e046e28a1e5379437ddc678 370 PANTHER PTHR22893:SF14 5 368 7.7E-169 T 23-04-2016 RR42_RS06385 fca19ae91e046e28a1e5379437ddc678 370 SUPERFAMILY SSF51395 3 369 4.89E-123 T 23-04-2016 RR42_RS01510 3aafd1079aa38b7a1303c27b5cd5f401 147 SUPERFAMILY SSF55729 4 117 7.26E-23 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS01510 3aafd1079aa38b7a1303c27b5cd5f401 147 Gene3D G3DSA:3.40.630.30 4 137 7.9E-19 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS01510 3aafd1079aa38b7a1303c27b5cd5f401 147 Pfam PF00583 Acetyltransferase (GNAT) family 43 113 1.0E-8 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RR42_RS01510 3aafd1079aa38b7a1303c27b5cd5f401 147 PANTHER PTHR23091 1 117 8.9E-14 T 23-04-2016 RR42_RS13045 36c1ef68a77976d4653e1cdb9eb1652f 228 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 53 222 1.9E-58 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RR42_RS13045 36c1ef68a77976d4653e1cdb9eb1652f 228 PANTHER PTHR11934:SF11 1 224 2.0E-112 T 23-04-2016 RR42_RS13045 36c1ef68a77976d4653e1cdb9eb1652f 228 Gene3D G3DSA:3.30.70.260 145 205 2.6E-27 T 23-04-2016 RR42_RS13045 36c1ef68a77976d4653e1cdb9eb1652f 228 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 226 33.453 T 23-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RR42_RS13045 36c1ef68a77976d4653e1cdb9eb1652f 228 Gene3D G3DSA:3.40.50.1360 4 144 2.7E-54 T 23-04-2016 RR42_RS13045 36c1ef68a77976d4653e1cdb9eb1652f 228 PANTHER PTHR11934 1 224 2.0E-112 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RR42_RS13045 36c1ef68a77976d4653e1cdb9eb1652f 228 SUPERFAMILY SSF100950 1 150 2.26E-42 T 23-04-2016 RR42_RS13045 36c1ef68a77976d4653e1cdb9eb1652f 228 SUPERFAMILY SSF75445 130 207 7.19E-23 T 23-04-2016 RR42_RS13045 36c1ef68a77976d4653e1cdb9eb1652f 228 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 12 224 1.3E-67 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RR42_RS18480 ba3819c081efb44d28ce1a873e9b0b3c 305 Gene3D G3DSA:3.40.50.150 106 296 3.5E-65 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS18480 ba3819c081efb44d28ce1a873e9b0b3c 305 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 23 297 42.541 T 23-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 RR42_RS18480 ba3819c081efb44d28ce1a873e9b0b3c 305 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 202 208 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RR42_RS18480 ba3819c081efb44d28ce1a873e9b0b3c 305 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 31 295 2.8E-70 T 23-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 RR42_RS18480 ba3819c081efb44d28ce1a873e9b0b3c 305 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 43 293 6.4E-86 T 23-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 RR42_RS18480 ba3819c081efb44d28ce1a873e9b0b3c 305 Gene3D G3DSA:1.10.8.10 30 104 1.3E-22 T 23-04-2016 RR42_RS18480 ba3819c081efb44d28ce1a873e9b0b3c 305 SUPERFAMILY SSF53335 28 295 2.13E-56 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS18480 ba3819c081efb44d28ce1a873e9b0b3c 305 PANTHER PTHR18895 17 291 4.7E-89 T 23-04-2016 RR42_RS18480 ba3819c081efb44d28ce1a873e9b0b3c 305 Pfam PF13847 Methyltransferase domain 133 262 7.2E-17 T 23-04-2016 IPR025714 Methyltransferase domain RR42_RS18480 ba3819c081efb44d28ce1a873e9b0b3c 305 PANTHER PTHR18895:SF64 17 291 4.7E-89 T 23-04-2016 RR42_RS14840 9ec448762eeaf75ff12c620846f7f875 264 PANTHER PTHR30136 9 264 7.3E-71 T 23-04-2016 RR42_RS14840 9ec448762eeaf75ff12c620846f7f875 264 Gene3D G3DSA:3.30.450.40 86 262 1.3E-51 T 23-04-2016 IPR029016 GAF domain-like RR42_RS14840 9ec448762eeaf75ff12c620846f7f875 264 SMART SM00346 18 106 1.8E-25 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RR42_RS14840 9ec448762eeaf75ff12c620846f7f875 264 SUPERFAMILY SSF55781 83 261 7.85E-47 T 23-04-2016 IPR029016 GAF domain-like RR42_RS14840 9ec448762eeaf75ff12c620846f7f875 264 Gene3D G3DSA:1.10.10.10 12 85 6.8E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS14840 9ec448762eeaf75ff12c620846f7f875 264 Pfam PF01614 Bacterial transcriptional regulator 134 258 6.5E-26 T 23-04-2016 IPR014757 Transcription regulator IclR, C-terminal RR42_RS14840 9ec448762eeaf75ff12c620846f7f875 264 SUPERFAMILY SSF46785 19 90 1.39E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS14840 9ec448762eeaf75ff12c620846f7f875 264 PANTHER PTHR30136:SF10 9 264 7.3E-71 T 23-04-2016 RR42_RS14840 9ec448762eeaf75ff12c620846f7f875 264 Pfam PF09339 IclR helix-turn-helix domain 20 71 2.0E-14 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RR42_RS19415 b283663e99060eb3f077b3a01de0e640 415 PANTHER PTHR35793 3 415 1.5E-186 T 23-04-2016 RR42_RS19415 b283663e99060eb3f077b3a01de0e640 415 Pfam PF07670 Nucleoside recognition 51 155 1.1E-7 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 RR42_RS19415 b283663e99060eb3f077b3a01de0e640 415 PIRSF PIRSF036542 2 415 6.2E-184 T 23-04-2016 IPR011415 Predicted bifunctional spore maturation protein, fused SpmA/SpmB RR42_RS19415 b283663e99060eb3f077b3a01de0e640 415 PANTHER PTHR35793:SF2 3 415 1.5E-186 T 23-04-2016 RR42_RS19215 2b0da575dfc9492419b9cd631261de55 64 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 23-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19215 2b0da575dfc9492419b9cd631261de55 64 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 4.9E-21 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19215 2b0da575dfc9492419b9cd631261de55 64 PANTHER PTHR10916 1 61 3.9E-22 T 23-04-2016 RR42_RS19215 2b0da575dfc9492419b9cd631261de55 64 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 17.572 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19215 2b0da575dfc9492419b9cd631261de55 64 Gene3D G3DSA:1.10.287.310 1 61 5.9E-26 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19215 2b0da575dfc9492419b9cd631261de55 64 SUPERFAMILY SSF46561 1 62 1.14E-20 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19215 2b0da575dfc9492419b9cd631261de55 64 Pfam PF00831 Ribosomal L29 protein 4 60 4.4E-23 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19215 2b0da575dfc9492419b9cd631261de55 64 PANTHER PTHR10916:SF0 1 61 3.9E-22 T 23-04-2016 RR42_RS15460 c15f5d99d1d0ad9792d7d8c9bd87dfee 442 SUPERFAMILY SSF69304 168 439 1.19E-54 T 23-04-2016 RR42_RS15460 c15f5d99d1d0ad9792d7d8c9bd87dfee 442 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 34 438 1.6E-154 T 23-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 RR42_RS15460 c15f5d99d1d0ad9792d7d8c9bd87dfee 442 Gene3D G3DSA:2.130.10.10 164 439 9.1E-74 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RR42_RS15460 c15f5d99d1d0ad9792d7d8c9bd87dfee 442 Pfam PF04052 TolB amino-terminal domain 41 140 9.3E-28 T 23-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 RR42_RS15460 c15f5d99d1d0ad9792d7d8c9bd87dfee 442 Hamap MF_00671 Protein TolB [tolB]. 23 437 34.379 T 23-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 RR42_RS15460 c15f5d99d1d0ad9792d7d8c9bd87dfee 442 PANTHER PTHR11731:SF123 172 439 3.6E-71 T 23-04-2016 RR42_RS15460 c15f5d99d1d0ad9792d7d8c9bd87dfee 442 PANTHER PTHR11731:SF123 4 135 3.6E-71 T 23-04-2016 RR42_RS15460 c15f5d99d1d0ad9792d7d8c9bd87dfee 442 Gene3D G3DSA:3.40.50.10070 40 163 8.9E-45 T 23-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 RR42_RS15460 c15f5d99d1d0ad9792d7d8c9bd87dfee 442 PANTHER PTHR11731 172 439 3.6E-71 T 23-04-2016 RR42_RS15460 c15f5d99d1d0ad9792d7d8c9bd87dfee 442 PANTHER PTHR11731 4 135 3.6E-71 T 23-04-2016 RR42_RS15460 c15f5d99d1d0ad9792d7d8c9bd87dfee 442 SUPERFAMILY SSF52964 46 173 3.27E-35 T 23-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 RR42_RS15460 c15f5d99d1d0ad9792d7d8c9bd87dfee 442 Pfam PF07676 WD40-like Beta Propeller Repeat 206 237 3.1E-6 T 23-04-2016 IPR011659 WD40-like Beta Propeller RR42_RS15460 c15f5d99d1d0ad9792d7d8c9bd87dfee 442 Pfam PF07676 WD40-like Beta Propeller Repeat 337 366 2.8E-4 T 23-04-2016 IPR011659 WD40-like Beta Propeller RR42_RS15460 c15f5d99d1d0ad9792d7d8c9bd87dfee 442 Pfam PF07676 WD40-like Beta Propeller Repeat 246 281 2.3E-10 T 23-04-2016 IPR011659 WD40-like Beta Propeller RR42_RS15460 c15f5d99d1d0ad9792d7d8c9bd87dfee 442 Pfam PF07676 WD40-like Beta Propeller Repeat 289 325 5.6E-12 T 23-04-2016 IPR011659 WD40-like Beta Propeller RR42_RS15460 c15f5d99d1d0ad9792d7d8c9bd87dfee 442 Pfam PF07676 WD40-like Beta Propeller Repeat 385 409 0.0078 T 23-04-2016 IPR011659 WD40-like Beta Propeller RR42_RS10260 34f117bb12bf0cb65d49b506b2314119 391 Gene3D G3DSA:3.40.47.10 146 184 1.1E-57 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS10260 34f117bb12bf0cb65d49b506b2314119 391 Gene3D G3DSA:3.40.47.10 275 390 1.1E-57 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS10260 34f117bb12bf0cb65d49b506b2314119 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 23-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 RR42_RS10260 34f117bb12bf0cb65d49b506b2314119 391 Gene3D G3DSA:3.40.47.10 185 272 2.8E-54 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS10260 34f117bb12bf0cb65d49b506b2314119 391 Gene3D G3DSA:3.40.47.10 4 125 2.8E-54 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS10260 34f117bb12bf0cb65d49b506b2314119 391 SUPERFAMILY SSF53901 1 265 2.51E-65 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS10260 34f117bb12bf0cb65d49b506b2314119 391 PANTHER PTHR18919:SF14 1 391 4.4E-208 T 23-04-2016 RR42_RS10260 34f117bb12bf0cb65d49b506b2314119 391 PIRSF PIRSF000429 1 391 2.7E-113 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RR42_RS10260 34f117bb12bf0cb65d49b506b2314119 391 Pfam PF00108 Thiolase, N-terminal domain 5 260 2.6E-56 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RR42_RS10260 34f117bb12bf0cb65d49b506b2314119 391 Pfam PF02803 Thiolase, C-terminal domain 269 389 1.6E-41 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RR42_RS10260 34f117bb12bf0cb65d49b506b2314119 391 SUPERFAMILY SSF53901 269 390 5.76E-40 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS10260 34f117bb12bf0cb65d49b506b2314119 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 23-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RR42_RS10260 34f117bb12bf0cb65d49b506b2314119 391 PANTHER PTHR18919 1 391 4.4E-208 T 23-04-2016 RR42_RS10260 34f117bb12bf0cb65d49b506b2314119 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 1.0E-118 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RR42_RS18950 a84a929724946acf30f6ec699527fadc 207 PANTHER PTHR36573 1 201 2.4E-31 T 23-04-2016 RR42_RS18950 a84a929724946acf30f6ec699527fadc 207 Pfam PF05494 MlaC protein 35 196 1.1E-50 T 23-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC RR42_RS18950 a84a929724946acf30f6ec699527fadc 207 Gene3D G3DSA:1.10.10.640 73 113 2.0E-29 T 23-04-2016 IPR023094 Toluene tolerance protein, alpha-helical RR42_RS18950 a84a929724946acf30f6ec699527fadc 207 Gene3D G3DSA:1.10.10.640 171 206 2.0E-29 T 23-04-2016 IPR023094 Toluene tolerance protein, alpha-helical RR42_RS18950 a84a929724946acf30f6ec699527fadc 207 PIRSF PIRSF004649 1 207 1.3E-49 T 23-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC RR42_RS18950 a84a929724946acf30f6ec699527fadc 207 Gene3D G3DSA:3.10.450.50 28 72 4.2E-33 T 23-04-2016 IPR032710 NTF2-like domain RR42_RS18950 a84a929724946acf30f6ec699527fadc 207 Gene3D G3DSA:3.10.450.50 116 170 4.2E-33 T 23-04-2016 IPR032710 NTF2-like domain RR42_RS09715 4c1525d3e8de4598328935dddfe29385 221 Gene3D G3DSA:3.40.50.2300 6 127 1.5E-20 T 23-04-2016 RR42_RS09715 4c1525d3e8de4598328935dddfe29385 221 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS09715 4c1525d3e8de4598328935dddfe29385 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 6.6E-6 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS09715 4c1525d3e8de4598328935dddfe29385 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 6.6E-6 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS09715 4c1525d3e8de4598328935dddfe29385 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 6.6E-6 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS09715 4c1525d3e8de4598328935dddfe29385 221 SMART SM00448 6 122 6.1E-10 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS09715 4c1525d3e8de4598328935dddfe29385 221 Gene3D G3DSA:1.10.10.10 128 205 3.7E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS09715 4c1525d3e8de4598328935dddfe29385 221 PANTHER PTHR26402:SF510 6 211 4.0E-44 T 23-04-2016 RR42_RS09715 4c1525d3e8de4598328935dddfe29385 221 Pfam PF00072 Response regulator receiver domain 8 122 2.2E-16 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS09715 4c1525d3e8de4598328935dddfe29385 221 SUPERFAMILY SSF52172 6 137 2.28E-21 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS09715 4c1525d3e8de4598328935dddfe29385 221 SUPERFAMILY SSF46894 141 205 7.48E-14 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS09715 4c1525d3e8de4598328935dddfe29385 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 205 4.1E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS09715 4c1525d3e8de4598328935dddfe29385 221 SMART SM00421 149 206 1.2E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS09715 4c1525d3e8de4598328935dddfe29385 221 PANTHER PTHR26402 6 211 4.0E-44 T 23-04-2016 RR42_RS02290 02736c72fee4da9cdb381ff9973bd79e 337 SUPERFAMILY SSF52540 17 241 3.09E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02290 02736c72fee4da9cdb381ff9973bd79e 337 SMART SM00382 44 223 2.9E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS02290 02736c72fee4da9cdb381ff9973bd79e 337 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS02290 02736c72fee4da9cdb381ff9973bd79e 337 PANTHER PTHR24220:SF0 21 258 3.5E-101 T 23-04-2016 RR42_RS02290 02736c72fee4da9cdb381ff9973bd79e 337 Gene3D G3DSA:3.40.50.300 17 239 3.8E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02290 02736c72fee4da9cdb381ff9973bd79e 337 Pfam PF00005 ABC transporter 36 177 1.4E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS02290 02736c72fee4da9cdb381ff9973bd79e 337 PANTHER PTHR24220 21 258 3.5E-101 T 23-04-2016 RR42_RS05465 52535cb40064c88362b2855f5a268bef 512 Pfam PF08502 LeuA allosteric (dimerisation) domain 371 500 1.4E-36 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RR42_RS05465 52535cb40064c88362b2855f5a268bef 512 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 498 1.1E-212 T 23-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RR42_RS05465 52535cb40064c88362b2855f5a268bef 512 SMART SM00917 371 501 2.2E-41 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RR42_RS05465 52535cb40064c88362b2855f5a268bef 512 SUPERFAMILY SSF110921 391 500 5.62E-28 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RR42_RS05465 52535cb40064c88362b2855f5a268bef 512 Pfam PF00682 HMGL-like 5 274 8.8E-99 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RR42_RS05465 52535cb40064c88362b2855f5a268bef 512 Gene3D G3DSA:3.20.20.70 1 348 4.3E-145 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS05465 52535cb40064c88362b2855f5a268bef 512 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 510 42.494 T 23-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RR42_RS05465 52535cb40064c88362b2855f5a268bef 512 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 23-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RR42_RS05465 52535cb40064c88362b2855f5a268bef 512 PANTHER PTHR10277 1 509 3.6E-240 T 23-04-2016 RR42_RS05465 52535cb40064c88362b2855f5a268bef 512 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 23-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RR42_RS05465 52535cb40064c88362b2855f5a268bef 512 PANTHER PTHR10277:SF9 1 509 3.6E-240 T 23-04-2016 RR42_RS05465 52535cb40064c88362b2855f5a268bef 512 SUPERFAMILY SSF51569 1 292 1.83E-96 T 23-04-2016 RR42_RS03285 40a6618d29664c956c6f848cf4f07b11 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 79 322 4.9E-20 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS03285 40a6618d29664c956c6f848cf4f07b11 325 SUPERFAMILY SSF53850 91 278 6.25E-11 T 23-04-2016 RR42_RS03285 40a6618d29664c956c6f848cf4f07b11 325 PANTHER PTHR30349 30 286 4.4E-132 T 23-04-2016 RR42_RS03285 40a6618d29664c956c6f848cf4f07b11 325 PANTHER PTHR30349:SF29 30 286 4.4E-132 T 23-04-2016 RR42_RS03285 40a6618d29664c956c6f848cf4f07b11 325 Gene3D G3DSA:3.40.190.10 123 225 3.5E-6 T 23-04-2016 RR42_RS03285 40a6618d29664c956c6f848cf4f07b11 325 PIRSF PIRSF017082 1 325 4.0E-73 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS02090 9d343bd3e68cf82ecc8ff12f95459930 261 PANTHER PTHR24220 21 258 3.0E-132 T 23-04-2016 RR42_RS02090 9d343bd3e68cf82ecc8ff12f95459930 261 SUPERFAMILY SSF52540 20 257 7.82E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02090 9d343bd3e68cf82ecc8ff12f95459930 261 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS02090 9d343bd3e68cf82ecc8ff12f95459930 261 Pfam PF00005 ABC transporter 35 186 4.9E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS02090 9d343bd3e68cf82ecc8ff12f95459930 261 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 19 261 2.0E-116 T 23-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 RR42_RS02090 9d343bd3e68cf82ecc8ff12f95459930 261 PANTHER PTHR24220:SF497 21 258 3.0E-132 T 23-04-2016 RR42_RS02090 9d343bd3e68cf82ecc8ff12f95459930 261 SMART SM00382 44 260 1.0E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS02090 9d343bd3e68cf82ecc8ff12f95459930 261 Gene3D G3DSA:3.40.50.300 18 254 7.5E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02090 9d343bd3e68cf82ecc8ff12f95459930 261 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 235 256 1.8E-5 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RR42_RS05005 fdfb41ba1598019bc506ec7bd1622f5e 422 PANTHER PTHR10617:SF103 13 315 1.4E-58 T 23-04-2016 RR42_RS05005 fdfb41ba1598019bc506ec7bd1622f5e 422 PANTHER PTHR10617:SF103 347 414 1.4E-58 T 23-04-2016 RR42_RS05005 fdfb41ba1598019bc506ec7bd1622f5e 422 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 33 414 1.2E-166 T 23-04-2016 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 RR42_RS05005 fdfb41ba1598019bc506ec7bd1622f5e 422 SUPERFAMILY SSF51905 12 200 3.24E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS05005 fdfb41ba1598019bc506ec7bd1622f5e 422 SUPERFAMILY SSF51905 354 409 3.24E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS05005 fdfb41ba1598019bc506ec7bd1622f5e 422 Pfam PF03486 HI0933-like protein 12 408 4.1E-115 T 23-04-2016 RR42_RS05005 fdfb41ba1598019bc506ec7bd1622f5e 422 PANTHER PTHR10617 13 315 1.4E-58 T 23-04-2016 RR42_RS05005 fdfb41ba1598019bc506ec7bd1622f5e 422 PANTHER PTHR10617 347 414 1.4E-58 T 23-04-2016 RR42_RS05005 fdfb41ba1598019bc506ec7bd1622f5e 422 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 13 407 3.0E-87 T 23-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like RR42_RS05005 fdfb41ba1598019bc506ec7bd1622f5e 422 Gene3D G3DSA:3.50.50.60 356 407 8.1E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS05005 fdfb41ba1598019bc506ec7bd1622f5e 422 Gene3D G3DSA:3.50.50.60 12 198 8.1E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS05005 fdfb41ba1598019bc506ec7bd1622f5e 422 SUPERFAMILY SSF160996 201 353 8.63E-10 T 23-04-2016 RR42_RS05005 fdfb41ba1598019bc506ec7bd1622f5e 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 1.1E-7 T 23-04-2016 RR42_RS05005 fdfb41ba1598019bc506ec7bd1622f5e 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 12 34 1.1E-7 T 23-04-2016 RR42_RS11585 1f4a59120a1b309472a1cd44a1fe252a 208 Pfam PF00156 Phosphoribosyl transferase domain 7 193 3.7E-35 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RR42_RS11585 1f4a59120a1b309472a1cd44a1fe252a 208 SUPERFAMILY SSF53271 1 206 2.25E-47 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS11585 1f4a59120a1b309472a1cd44a1fe252a 208 Gene3D G3DSA:3.40.50.2020 3 202 6.8E-37 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS11585 1f4a59120a1b309472a1cd44a1fe252a 208 PANTHER PTHR31299 1 207 7.3E-62 T 23-04-2016 RR42_RS10425 78bc1c6156d899785c293000de5140a9 345 Gene3D G3DSA:1.20.1250.20 1 126 1.5E-26 T 23-04-2016 RR42_RS10425 78bc1c6156d899785c293000de5140a9 345 SUPERFAMILY SSF103473 1 338 7.72E-62 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS10425 78bc1c6156d899785c293000de5140a9 345 Pfam PF07690 Major Facilitator Superfamily 1 275 7.6E-31 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS10425 78bc1c6156d899785c293000de5140a9 345 Gene3D G3DSA:1.20.1250.20 149 335 3.9E-21 T 23-04-2016 RR42_RS10425 78bc1c6156d899785c293000de5140a9 345 PANTHER PTHR11662 1 342 1.4E-91 T 23-04-2016 RR42_RS10425 78bc1c6156d899785c293000de5140a9 345 PANTHER PTHR11662:SF3 1 342 1.4E-91 T 23-04-2016 RR42_RS17835 944aa0358071855534d0e49bca0742cb 782 Gene3D G3DSA:3.10.20.30 679 779 1.9E-23 T 23-04-2016 IPR012675 Beta-grasp domain RR42_RS17835 944aa0358071855534d0e49bca0742cb 782 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 381 390 - T 23-04-2016 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Reactome: REACT_13433 RR42_RS17835 944aa0358071855534d0e49bca0742cb 782 SUPERFAMILY SSF63380 469 564 6.24E-27 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RR42_RS17835 944aa0358071855534d0e49bca0742cb 782 Pfam PF00970 Oxidoreductase FAD-binding domain 472 566 2.4E-5 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain RR42_RS17835 944aa0358071855534d0e49bca0742cb 782 Pfam PF00175 Oxidoreductase NAD-binding domain 577 666 4.4E-5 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RR42_RS17835 944aa0358071855534d0e49bca0742cb 782 Gene3D G3DSA:1.10.630.10 22 442 1.2E-107 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 RR42_RS17835 944aa0358071855534d0e49bca0742cb 782 Pfam PF00067 Cytochrome P450 312 408 2.6E-17 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 RR42_RS17835 944aa0358071855534d0e49bca0742cb 782 PANTHER PTHR11712 38 452 2.0E-63 T 23-04-2016 RR42_RS17835 944aa0358071855534d0e49bca0742cb 782 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 702 773 1.7E-12 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS17835 944aa0358071855534d0e49bca0742cb 782 SUPERFAMILY SSF52343 565 680 3.93E-26 T 23-04-2016 RR42_RS17835 944aa0358071855534d0e49bca0742cb 782 PRINTS PR00359 B-class P450 signature 357 372 1.8E-32 T 23-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RR42_RS17835 944aa0358071855534d0e49bca0742cb 782 PRINTS PR00359 B-class P450 signature 123 134 1.8E-32 T 23-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RR42_RS17835 944aa0358071855534d0e49bca0742cb 782 PRINTS PR00359 B-class P450 signature 186 201 1.8E-32 T 23-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RR42_RS17835 944aa0358071855534d0e49bca0742cb 782 PRINTS PR00359 B-class P450 signature 388 399 1.8E-32 T 23-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RR42_RS17835 944aa0358071855534d0e49bca0742cb 782 PRINTS PR00359 B-class P450 signature 379 388 1.8E-32 T 23-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RR42_RS17835 944aa0358071855534d0e49bca0742cb 782 PRINTS PR00359 B-class P450 signature 312 323 1.8E-32 T 23-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RR42_RS17835 944aa0358071855534d0e49bca0742cb 782 PRINTS PR00359 B-class P450 signature 329 356 1.8E-32 T 23-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RR42_RS17835 944aa0358071855534d0e49bca0742cb 782 PRINTS PR00359 B-class P450 signature 169 185 1.8E-32 T 23-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RR42_RS17835 944aa0358071855534d0e49bca0742cb 782 SUPERFAMILY SSF54292 672 782 3.93E-26 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS17835 944aa0358071855534d0e49bca0742cb 782 SUPERFAMILY SSF48264 25 440 5.63E-86 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 RR42_RS17835 944aa0358071855534d0e49bca0742cb 782 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 731 739 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RR42_RS17835 944aa0358071855534d0e49bca0742cb 782 Gene3D G3DSA:3.40.50.80 567 678 1.3E-24 T 23-04-2016 RR42_RS17835 944aa0358071855534d0e49bca0742cb 782 Gene3D G3DSA:2.40.30.10 469 565 4.4E-33 T 23-04-2016 RR42_RS17175 c7df1e06a2abfec807db80c886412c0b 307 Gene3D G3DSA:3.40.50.1370 144 290 7.5E-56 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RR42_RS17175 c7df1e06a2abfec807db80c886412c0b 307 SUPERFAMILY SSF53671 4 303 1.27E-103 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RR42_RS17175 c7df1e06a2abfec807db80c886412c0b 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 9.2E-29 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RR42_RS17175 c7df1e06a2abfec807db80c886412c0b 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 220 230 9.2E-29 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RR42_RS17175 c7df1e06a2abfec807db80c886412c0b 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 9.2E-29 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RR42_RS17175 c7df1e06a2abfec807db80c886412c0b 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 282 293 9.2E-29 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RR42_RS17175 c7df1e06a2abfec807db80c886412c0b 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 9.2E-29 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RR42_RS17175 c7df1e06a2abfec807db80c886412c0b 307 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 5.0E-49 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 RR42_RS17175 c7df1e06a2abfec807db80c886412c0b 307 PANTHER PTHR11405 7 303 1.4E-131 T 23-04-2016 RR42_RS17175 c7df1e06a2abfec807db80c886412c0b 307 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RR42_RS17175 c7df1e06a2abfec807db80c886412c0b 307 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 303 1.7E-106 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RR42_RS17175 c7df1e06a2abfec807db80c886412c0b 307 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 154 301 1.3E-48 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 RR42_RS17175 c7df1e06a2abfec807db80c886412c0b 307 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 304 76.225 T 23-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RR42_RS17175 c7df1e06a2abfec807db80c886412c0b 307 Gene3D G3DSA:3.40.50.1370 5 143 3.1E-56 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RR42_RS17175 c7df1e06a2abfec807db80c886412c0b 307 PANTHER PTHR11405:SF1 7 303 1.4E-131 T 23-04-2016 RR42_RS17175 c7df1e06a2abfec807db80c886412c0b 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 256 265 2.0E-26 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RR42_RS17175 c7df1e06a2abfec807db80c886412c0b 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 2.0E-26 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RR42_RS17175 c7df1e06a2abfec807db80c886412c0b 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 291 2.0E-26 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RR42_RS17175 c7df1e06a2abfec807db80c886412c0b 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 2.0E-26 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RR42_RS14050 1db0c01b1447e7f5439f6e21d68c595d 299 Pfam PF10502 Signal peptidase, peptidase S26 248 286 5.6E-8 T 23-04-2016 IPR019533 Peptidase S26 RR42_RS14050 1db0c01b1447e7f5439f6e21d68c595d 299 ProSitePatterns PS00501 Signal peptidases I serine active site. 102 109 - T 23-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 RR42_RS14050 1db0c01b1447e7f5439f6e21d68c595d 299 Pfam PF00717 Peptidase S24-like 99 181 1.6E-21 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B RR42_RS14050 1db0c01b1447e7f5439f6e21d68c595d 299 ProSitePatterns PS00761 Signal peptidases I signature 3. 254 267 - T 23-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 RR42_RS14050 1db0c01b1447e7f5439f6e21d68c595d 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 157 169 3.1E-25 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RR42_RS14050 1db0c01b1447e7f5439f6e21d68c595d 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 93 109 3.1E-25 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RR42_RS14050 1db0c01b1447e7f5439f6e21d68c595d 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 249 268 3.1E-25 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RR42_RS14050 1db0c01b1447e7f5439f6e21d68c595d 299 SUPERFAMILY SSF51306 91 295 1.41E-68 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RR42_RS14050 1db0c01b1447e7f5439f6e21d68c595d 299 ProSitePatterns PS00760 Signal peptidases I lysine active site. 159 171 - T 23-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 RR42_RS14050 1db0c01b1447e7f5439f6e21d68c595d 299 Gene3D G3DSA:2.10.109.10 249 295 3.3E-56 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RR42_RS14050 1db0c01b1447e7f5439f6e21d68c595d 299 Gene3D G3DSA:2.10.109.10 89 167 3.3E-56 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RR42_RS14050 1db0c01b1447e7f5439f6e21d68c595d 299 PANTHER PTHR12383 234 295 1.3E-85 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RR42_RS14050 1db0c01b1447e7f5439f6e21d68c595d 299 PANTHER PTHR12383 1 203 1.3E-85 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RR42_RS14050 1db0c01b1447e7f5439f6e21d68c595d 299 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 79 287 7.8E-52 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RR42_RS14050 1db0c01b1447e7f5439f6e21d68c595d 299 PANTHER PTHR12383:SF27 234 295 1.3E-85 T 23-04-2016 RR42_RS14050 1db0c01b1447e7f5439f6e21d68c595d 299 PANTHER PTHR12383:SF27 1 203 1.3E-85 T 23-04-2016 RR42_RS17425 7b3d6149771862bc16fb339c3abcc6f6 377 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 268 368 2.4E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS17425 7b3d6149771862bc16fb339c3abcc6f6 377 Gene3D G3DSA:3.30.565.10 199 368 4.0E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS17425 7b3d6149771862bc16fb339c3abcc6f6 377 PANTHER PTHR24423 114 366 4.4E-22 T 23-04-2016 RR42_RS17425 7b3d6149771862bc16fb339c3abcc6f6 377 Gene3D G3DSA:3.40.50.2300 9 135 6.4E-25 T 23-04-2016 RR42_RS17425 7b3d6149771862bc16fb339c3abcc6f6 377 Gene3D G3DSA:1.10.287.130 141 198 2.2E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS17425 7b3d6149771862bc16fb339c3abcc6f6 377 SUPERFAMILY SSF52172 7 146 4.98E-25 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS17425 7b3d6149771862bc16fb339c3abcc6f6 377 SUPERFAMILY SSF47384 132 209 4.9E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS17425 7b3d6149771862bc16fb339c3abcc6f6 377 Pfam PF00512 His Kinase A (phospho-acceptor) domain 144 208 1.1E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS17425 7b3d6149771862bc16fb339c3abcc6f6 377 SMART SM00387 260 369 8.4E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS17425 7b3d6149771862bc16fb339c3abcc6f6 377 SMART SM00448 9 122 6.9E-14 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS17425 7b3d6149771862bc16fb339c3abcc6f6 377 SMART SM00388 141 213 5.8E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS17425 7b3d6149771862bc16fb339c3abcc6f6 377 SUPERFAMILY SSF55874 232 367 2.1E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS17425 7b3d6149771862bc16fb339c3abcc6f6 377 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 347 4.7E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS17425 7b3d6149771862bc16fb339c3abcc6f6 377 PRINTS PR00344 Bacterial sensor protein C-terminal signature 298 312 4.7E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS17425 7b3d6149771862bc16fb339c3abcc6f6 377 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 366 4.7E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS17425 7b3d6149771862bc16fb339c3abcc6f6 377 Pfam PF00072 Response regulator receiver domain 11 122 1.7E-14 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS00985 f442bc1cbd14390386a49563100c2bc0 204 Gene3D G3DSA:3.40.630.30 3 175 8.4E-35 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS00985 f442bc1cbd14390386a49563100c2bc0 204 PANTHER PTHR13256:SF29 11 198 3.4E-30 T 23-04-2016 RR42_RS00985 f442bc1cbd14390386a49563100c2bc0 204 Pfam PF13302 Acetyltransferase (GNAT) domain 10 150 3.1E-19 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RR42_RS00985 f442bc1cbd14390386a49563100c2bc0 204 SUPERFAMILY SSF55729 3 174 3.61E-33 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS00985 f442bc1cbd14390386a49563100c2bc0 204 PANTHER PTHR13256 11 198 3.4E-30 T 23-04-2016 RR42_RS18465 288c5145d27f4085d36005023e23cbe0 434 SUPERFAMILY SSF51735 169 324 3.21E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS18465 288c5145d27f4085d36005023e23cbe0 434 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 178 316 2.0E-44 T 23-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RR42_RS18465 288c5145d27f4085d36005023e23cbe0 434 SUPERFAMILY SSF69075 328 428 3.79E-28 T 23-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RR42_RS18465 288c5145d27f4085d36005023e23cbe0 434 PANTHER PTHR21089:SF3 283 370 5.5E-110 T 23-04-2016 RR42_RS18465 288c5145d27f4085d36005023e23cbe0 434 PANTHER PTHR21089:SF3 76 267 5.5E-110 T 23-04-2016 RR42_RS18465 288c5145d27f4085d36005023e23cbe0 434 PANTHER PTHR21089 283 370 5.5E-110 T 23-04-2016 RR42_RS18465 288c5145d27f4085d36005023e23cbe0 434 PANTHER PTHR21089 76 267 5.5E-110 T 23-04-2016 RR42_RS18465 288c5145d27f4085d36005023e23cbe0 434 SUPERFAMILY SSF69742 1 164 3.53E-45 T 23-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RR42_RS18465 288c5145d27f4085d36005023e23cbe0 434 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 331 426 8.6E-27 T 23-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RR42_RS18465 288c5145d27f4085d36005023e23cbe0 434 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 162 1.8E-47 T 23-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RR42_RS18465 288c5145d27f4085d36005023e23cbe0 434 PIRSF PIRSF000445 1 434 4.4E-144 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RR42_RS18465 288c5145d27f4085d36005023e23cbe0 434 Gene3D G3DSA:3.40.50.720 189 370 5.1E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS18465 288c5145d27f4085d36005023e23cbe0 434 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 420 1.2E-123 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RR42_RS18465 288c5145d27f4085d36005023e23cbe0 434 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 105 128 - T 23-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RR42_RS18465 288c5145d27f4085d36005023e23cbe0 434 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 429 29.172 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RR42_RS03915 a238d259700d286583761304b98a5bb1 761 SMART SM01008 225 326 5.8E-18 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RR42_RS03915 a238d259700d286583761304b98a5bb1 761 PIRSF PIRSF036389 7 761 6.5E-216 T 23-04-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related RR42_RS03915 a238d259700d286583761304b98a5bb1 761 SUPERFAMILY SSF56003 29 257 1.29E-35 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS03915 a238d259700d286583761304b98a5bb1 761 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 352 602 2.4E-30 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS03915 a238d259700d286583761304b98a5bb1 761 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 629 708 1.2E-12 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS03915 a238d259700d286583761304b98a5bb1 761 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 60 201 7.8E-10 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS03915 a238d259700d286583761304b98a5bb1 761 PANTHER PTHR11908:SF2 137 750 6.6E-138 T 23-04-2016 RR42_RS03915 a238d259700d286583761304b98a5bb1 761 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 225 322 9.1E-8 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RR42_RS03915 a238d259700d286583761304b98a5bb1 761 Gene3D G3DSA:3.30.365.10 557 756 6.4E-39 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS03915 a238d259700d286583761304b98a5bb1 761 PANTHER PTHR11908 137 750 6.6E-138 T 23-04-2016 RR42_RS03915 a238d259700d286583761304b98a5bb1 761 SUPERFAMILY SSF56003 353 754 2.09E-104 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS03915 a238d259700d286583761304b98a5bb1 761 Gene3D G3DSA:3.30.365.10 353 467 4.2E-26 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS03915 a238d259700d286583761304b98a5bb1 761 Gene3D G3DSA:3.90.1170.50 194 323 3.6E-24 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RR42_RS03915 a238d259700d286583761304b98a5bb1 761 Gene3D G3DSA:3.30.365.10 60 192 3.5E-28 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS03915 a238d259700d286583761304b98a5bb1 761 SUPERFAMILY SSF54665 226 323 9.77E-15 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RR42_RS17780 f85aaf9a41e829f43dbadb2cb446cc9f 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 6.2E-21 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS17780 f85aaf9a41e829f43dbadb2cb446cc9f 296 SUPERFAMILY SSF53850 83 294 2.71E-19 T 23-04-2016 RR42_RS17780 f85aaf9a41e829f43dbadb2cb446cc9f 296 SUPERFAMILY SSF46785 4 105 1.91E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS17780 f85aaf9a41e829f43dbadb2cb446cc9f 296 Pfam PF03466 LysR substrate binding domain 90 293 6.6E-19 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS17780 f85aaf9a41e829f43dbadb2cb446cc9f 296 PANTHER PTHR30579 1 296 6.4E-43 T 23-04-2016 RR42_RS17780 f85aaf9a41e829f43dbadb2cb446cc9f 296 Gene3D G3DSA:3.40.190.10 200 248 2.6E-6 T 23-04-2016 RR42_RS17780 f85aaf9a41e829f43dbadb2cb446cc9f 296 Gene3D G3DSA:3.40.190.10 88 199 1.5E-11 T 23-04-2016 RR42_RS17780 f85aaf9a41e829f43dbadb2cb446cc9f 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.0E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS17780 f85aaf9a41e829f43dbadb2cb446cc9f 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.0E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS17780 f85aaf9a41e829f43dbadb2cb446cc9f 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.0E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS17780 f85aaf9a41e829f43dbadb2cb446cc9f 296 Gene3D G3DSA:1.10.10.10 4 87 1.2E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS20215 fd8fdd7402775faeaa9300d5eba70555 646 Pfam PF13932 GidA associated domain 403 626 4.5E-72 T 23-04-2016 IPR026904 GidA associated domain 3 RR42_RS20215 fd8fdd7402775faeaa9300d5eba70555 646 PANTHER PTHR11806:SF0 1 644 0.0 T 23-04-2016 RR42_RS20215 fd8fdd7402775faeaa9300d5eba70555 646 PANTHER PTHR11806 1 644 0.0 T 23-04-2016 RR42_RS20215 fd8fdd7402775faeaa9300d5eba70555 646 SUPERFAMILY SSF51905 6 66 4.23E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS20215 fd8fdd7402775faeaa9300d5eba70555 646 SUPERFAMILY SSF51905 97 262 4.23E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS20215 fd8fdd7402775faeaa9300d5eba70555 646 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 634 42.387 T 23-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 RR42_RS20215 fd8fdd7402775faeaa9300d5eba70555 646 Pfam PF01134 Glucose inhibited division protein A 8 399 1.5E-164 T 23-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 RR42_RS20215 fd8fdd7402775faeaa9300d5eba70555 646 SMART SM01228 556 627 2.5E-42 T 23-04-2016 RR42_RS20215 fd8fdd7402775faeaa9300d5eba70555 646 Gene3D G3DSA:3.50.50.60 6 233 6.4E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS20215 fd8fdd7402775faeaa9300d5eba70555 646 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 274 288 - T 23-04-2016 IPR020595 MnmG-related, conserved site RR42_RS20215 fd8fdd7402775faeaa9300d5eba70555 646 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 632 2.2E-270 T 23-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 RR42_RS20215 fd8fdd7402775faeaa9300d5eba70555 646 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 369 392 - T 23-04-2016 IPR020595 MnmG-related, conserved site RR42_RS07760 1b188de67bb4f9e6c51f169533d4e625 327 PANTHER PTHR30040:SF3 1 327 5.3E-96 T 23-04-2016 RR42_RS07760 1b188de67bb4f9e6c51f169533d4e625 327 Pfam PF02424 ApbE family 24 307 1.0E-71 T 23-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 RR42_RS07760 1b188de67bb4f9e6c51f169533d4e625 327 PIRSF PIRSF006268 4 321 4.2E-78 T 23-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 RR42_RS07760 1b188de67bb4f9e6c51f169533d4e625 327 PANTHER PTHR30040 1 327 5.3E-96 T 23-04-2016 RR42_RS07760 1b188de67bb4f9e6c51f169533d4e625 327 SUPERFAMILY SSF143631 16 322 8.5E-86 T 23-04-2016 IPR003374 ApbE-like domain RR42_RS19225 7939a86d99d8a6823d11d320fa840f90 268 Pfam PF07650 KH domain 38 110 5.3E-21 T 23-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 RR42_RS19225 7939a86d99d8a6823d11d320fa840f90 268 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.352 T 23-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 RR42_RS19225 7939a86d99d8a6823d11d320fa840f90 268 PANTHER PTHR11760 2 244 8.7E-126 T 23-04-2016 RR42_RS19225 7939a86d99d8a6823d11d320fa840f90 268 SMART SM00322 60 125 4.0E-8 T 23-04-2016 IPR004087 K Homology domain GO:0003676 RR42_RS19225 7939a86d99d8a6823d11d320fa840f90 268 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 23-04-2016 IPR018280 Ribosomal protein S3, conserved site RR42_RS19225 7939a86d99d8a6823d11d320fa840f90 268 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 5.1E-40 T 23-04-2016 RR42_RS19225 7939a86d99d8a6823d11d320fa840f90 268 SUPERFAMILY SSF54821 108 206 5.23E-39 T 23-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 RR42_RS19225 7939a86d99d8a6823d11d320fa840f90 268 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.1E-91 T 23-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 RR42_RS19225 7939a86d99d8a6823d11d320fa840f90 268 Gene3D G3DSA:3.30.300.20 17 107 1.8E-30 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta RR42_RS19225 7939a86d99d8a6823d11d320fa840f90 268 SUPERFAMILY SSF54814 2 106 6.8E-36 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RR42_RS19225 7939a86d99d8a6823d11d320fa840f90 268 PANTHER PTHR11760:SF19 2 244 8.7E-126 T 23-04-2016 RR42_RS19225 7939a86d99d8a6823d11d320fa840f90 268 Gene3D G3DSA:3.30.1140.32 108 206 4.0E-45 T 23-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 RR42_RS15555 c60b0f774f9d858bbcb8740f901596cb 372 Gene3D G3DSA:3.40.140.10 5 134 9.7E-34 T 23-04-2016 RR42_RS15555 c60b0f774f9d858bbcb8740f901596cb 372 SUPERFAMILY SSF53597 151 367 8.39E-59 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain RR42_RS15555 c60b0f774f9d858bbcb8740f901596cb 372 PANTHER PTHR11079 1 226 1.4E-60 T 23-04-2016 RR42_RS15555 c60b0f774f9d858bbcb8740f901596cb 372 Gene3D G3DSA:3.40.430.10 135 368 4.0E-74 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain RR42_RS15555 c60b0f774f9d858bbcb8740f901596cb 372 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 10 364 3.8E-113 T 23-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 RR42_RS15555 c60b0f774f9d858bbcb8740f901596cb 372 PANTHER PTHR11079:SF10 1 226 1.4E-60 T 23-04-2016 RR42_RS15555 c60b0f774f9d858bbcb8740f901596cb 372 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 94 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RR42_RS15555 c60b0f774f9d858bbcb8740f901596cb 372 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 152 366 4.6E-54 T 23-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 RR42_RS15555 c60b0f774f9d858bbcb8740f901596cb 372 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 105 1.8E-18 T 23-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 RR42_RS15555 c60b0f774f9d858bbcb8740f901596cb 372 PIRSF PIRSF006769 1 371 1.7E-121 T 23-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 RR42_RS15555 c60b0f774f9d858bbcb8740f901596cb 372 Pfam PF01872 RibD C-terminal domain 153 346 7.2E-46 T 23-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 RR42_RS15555 c60b0f774f9d858bbcb8740f901596cb 372 SUPERFAMILY SSF53927 6 150 3.51E-46 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RR42_RS05390 29f53cee6bdb882f5766a562f699506f 232 Gene3D G3DSA:1.10.357.10 5 185 3.8E-29 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS05390 29f53cee6bdb882f5766a562f699506f 232 Pfam PF13972 Bacterial transcriptional repressor 66 212 3.9E-46 T 23-04-2016 IPR025722 Bacterial transcriptional repressor TetR RR42_RS05390 29f53cee6bdb882f5766a562f699506f 232 PANTHER PTHR30055:SF30 2 171 3.2E-41 T 23-04-2016 RR42_RS05390 29f53cee6bdb882f5766a562f699506f 232 PANTHER PTHR30055 2 171 3.2E-41 T 23-04-2016 RR42_RS05390 29f53cee6bdb882f5766a562f699506f 232 SUPERFAMILY SSF46689 4 76 2.82E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS05390 29f53cee6bdb882f5766a562f699506f 232 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 3.5E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS05390 29f53cee6bdb882f5766a562f699506f 232 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 4.93E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS05390 29f53cee6bdb882f5766a562f699506f 232 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 4.93E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS19695 bc69805881537cca2fca837f5f412530 109 Pfam PF00034 Cytochrome c 23 103 6.2E-7 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS19695 bc69805881537cca2fca837f5f412530 109 PRINTS PR00606 Class ID cytochrome C signature 29 42 3.3E-22 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RR42_RS19695 bc69805881537cca2fca837f5f412530 109 PRINTS PR00606 Class ID cytochrome C signature 82 92 3.3E-22 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RR42_RS19695 bc69805881537cca2fca837f5f412530 109 PRINTS PR00606 Class ID cytochrome C signature 44 57 3.3E-22 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RR42_RS19695 bc69805881537cca2fca837f5f412530 109 PRINTS PR00606 Class ID cytochrome C signature 94 104 3.3E-22 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RR42_RS19695 bc69805881537cca2fca837f5f412530 109 PRINTS PR00606 Class ID cytochrome C signature 67 80 3.3E-22 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RR42_RS19695 bc69805881537cca2fca837f5f412530 109 Gene3D G3DSA:1.10.760.10 25 103 1.1E-31 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS19695 bc69805881537cca2fca837f5f412530 109 SUPERFAMILY SSF46626 26 103 3.75E-18 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS06285 3524b1a2d60bb22e6b4abc90edc3318d 880 Gene3D G3DSA:3.40.1170.10 1 111 4.7E-47 T 23-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 RR42_RS06285 3524b1a2d60bb22e6b4abc90edc3318d 880 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 682 698 - T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RR42_RS06285 3524b1a2d60bb22e6b4abc90edc3318d 880 Pfam PF00488 MutS domain V 605 790 6.3E-82 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RR42_RS06285 3524b1a2d60bb22e6b4abc90edc3318d 880 SUPERFAMILY SSF48334 259 556 3.53E-86 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RR42_RS06285 3524b1a2d60bb22e6b4abc90edc3318d 880 Gene3D G3DSA:1.10.1420.10 257 459 9.2E-49 T 23-04-2016 RR42_RS06285 3524b1a2d60bb22e6b4abc90edc3318d 880 Pfam PF05188 MutS domain II 120 244 4.4E-20 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RR42_RS06285 3524b1a2d60bb22e6b4abc90edc3318d 880 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 1 870 0.0 T 23-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 RR42_RS06285 3524b1a2d60bb22e6b4abc90edc3318d 880 Pfam PF05192 MutS domain III 261 550 1.1E-36 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RR42_RS06285 3524b1a2d60bb22e6b4abc90edc3318d 880 Pfam PF01624 MutS domain I 1 110 6.9E-40 T 23-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 RR42_RS06285 3524b1a2d60bb22e6b4abc90edc3318d 880 SMART SM00533 275 582 2.8E-91 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RR42_RS06285 3524b1a2d60bb22e6b4abc90edc3318d 880 Pfam PF05190 MutS family domain IV 419 510 1.4E-29 T 23-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 RR42_RS06285 3524b1a2d60bb22e6b4abc90edc3318d 880 SUPERFAMILY SSF53150 108 272 2.22E-34 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RR42_RS06285 3524b1a2d60bb22e6b4abc90edc3318d 880 SUPERFAMILY SSF55271 1 106 2.75E-40 T 23-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 RR42_RS06285 3524b1a2d60bb22e6b4abc90edc3318d 880 PANTHER PTHR11361:SF86 1 877 0.0 T 23-04-2016 RR42_RS06285 3524b1a2d60bb22e6b4abc90edc3318d 880 PANTHER PTHR11361 1 877 0.0 T 23-04-2016 RR42_RS06285 3524b1a2d60bb22e6b4abc90edc3318d 880 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 865 24.213 T 23-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 RR42_RS06285 3524b1a2d60bb22e6b4abc90edc3318d 880 SMART SM00534 601 788 1.2E-111 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RR42_RS06285 3524b1a2d60bb22e6b4abc90edc3318d 880 Gene3D G3DSA:3.30.420.110 118 246 1.5E-33 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RR42_RS06285 3524b1a2d60bb22e6b4abc90edc3318d 880 Gene3D G3DSA:3.40.50.300 560 792 4.2E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS06285 3524b1a2d60bb22e6b4abc90edc3318d 880 SUPERFAMILY SSF52540 558 792 2.73E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS35695 1627c943d42c9341244a17f0744e60b1 227 Gene3D G3DSA:3.30.70.20 157 220 1.0E-16 T 23-04-2016 RR42_RS35695 1627c943d42c9341244a17f0744e60b1 227 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 199 210 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RR42_RS35695 1627c943d42c9341244a17f0744e60b1 227 Pfam PF13187 4Fe-4S dicluster domain 167 214 1.2E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RR42_RS35695 1627c943d42c9341244a17f0744e60b1 227 SUPERFAMILY SSF54862 134 220 9.33E-20 T 23-04-2016 RR42_RS35695 1627c943d42c9341244a17f0744e60b1 227 PANTHER PTHR24960:SF43 144 218 5.4E-25 T 23-04-2016 RR42_RS35695 1627c943d42c9341244a17f0744e60b1 227 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 168 179 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RR42_RS35695 1627c943d42c9341244a17f0744e60b1 227 PANTHER PTHR24960 144 218 5.4E-25 T 23-04-2016 RR42_RS01610 ecfd4cefba50091a4322c022aeb863e9 284 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 183 207 - T 23-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RR42_RS01610 ecfd4cefba50091a4322c022aeb863e9 284 SUPERFAMILY SSF48179 185 284 4.0E-32 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RR42_RS01610 ecfd4cefba50091a4322c022aeb863e9 284 Gene3D G3DSA:1.10.1040.10 188 283 1.2E-34 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RR42_RS01610 ecfd4cefba50091a4322c022aeb863e9 284 PIRSF PIRSF000105 1 284 4.9E-84 T 23-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 RR42_RS01610 ecfd4cefba50091a4322c022aeb863e9 284 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 183 3.7E-63 T 23-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RR42_RS01610 ecfd4cefba50091a4322c022aeb863e9 284 Gene3D G3DSA:3.40.50.720 3 187 5.0E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS01610 ecfd4cefba50091a4322c022aeb863e9 284 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 282 2.4E-33 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RR42_RS01610 ecfd4cefba50091a4322c022aeb863e9 284 SUPERFAMILY SSF51735 2 184 2.9E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS01610 ecfd4cefba50091a4322c022aeb863e9 284 PANTHER PTHR23309 1 284 9.5E-134 T 23-04-2016 RR42_RS03865 1a1c024c76e88b32215dda957968c092 313 Gene3D G3DSA:3.40.50.720 116 283 1.9E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS03865 1a1c024c76e88b32215dda957968c092 313 Gene3D G3DSA:3.40.50.720 10 115 1.4E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS03865 1a1c024c76e88b32215dda957968c092 313 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 281 3.3E-49 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RR42_RS03865 1a1c024c76e88b32215dda957968c092 313 SUPERFAMILY SSF51735 101 282 8.63E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS03865 1a1c024c76e88b32215dda957968c092 313 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 18 312 4.0E-24 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RR42_RS03865 1a1c024c76e88b32215dda957968c092 313 PANTHER PTHR10996 9 312 9.7E-109 T 23-04-2016 RR42_RS03865 1a1c024c76e88b32215dda957968c092 313 PANTHER PTHR10996:SF152 9 312 9.7E-109 T 23-04-2016 RR42_RS03865 1a1c024c76e88b32215dda957968c092 313 SUPERFAMILY SSF52283 7 136 1.49E-30 T 23-04-2016 RR42_RS02320 edfcef42950c456100cd9d92a895aab4 261 SUPERFAMILY SSF56784 12 238 1.36E-37 T 23-04-2016 IPR023214 HAD-like domain RR42_RS02320 edfcef42950c456100cd9d92a895aab4 261 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 13 205 1.2E-20 T 23-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 RR42_RS02320 edfcef42950c456100cd9d92a895aab4 261 Gene3D G3DSA:3.40.50.1000 11 86 1.1E-40 T 23-04-2016 IPR023214 HAD-like domain RR42_RS02320 edfcef42950c456100cd9d92a895aab4 261 Gene3D G3DSA:3.40.50.1000 159 242 1.1E-40 T 23-04-2016 IPR023214 HAD-like domain RR42_RS02320 edfcef42950c456100cd9d92a895aab4 261 PANTHER PTHR10788:SF42 5 208 3.6E-40 T 23-04-2016 RR42_RS02320 edfcef42950c456100cd9d92a895aab4 261 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 11 235 8.4E-41 T 23-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 RR42_RS02320 edfcef42950c456100cd9d92a895aab4 261 Pfam PF02358 Trehalose-phosphatase 14 218 1.1E-38 T 23-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 RR42_RS02320 edfcef42950c456100cd9d92a895aab4 261 PANTHER PTHR10788 5 208 3.6E-40 T 23-04-2016 RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 PANTHER PTHR32063:SF21 1 497 0.0 T 23-04-2016 RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 PANTHER PTHR32063:SF21 519 1041 0.0 T 23-04-2016 RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 2.7E-66 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 2.7E-66 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 2.7E-66 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 2.7E-66 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.7E-66 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 PRINTS PR00702 Acriflavin resistance protein family signature 635 649 2.7E-66 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 2.7E-66 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.7E-66 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 Gene3D G3DSA:3.30.70.1430 41 141 1.6E-26 T 23-04-2016 RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 SUPERFAMILY SSF82714 734 817 6.67E-18 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 SUPERFAMILY SSF82714 184 267 2.09E-18 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 Pfam PF00873 AcrB/AcrD/AcrF family 4 1037 3.4E-300 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 SUPERFAMILY SSF82866 815 1039 1.83E-42 T 23-04-2016 RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 SUPERFAMILY SSF82866 291 490 1.96E-46 T 23-04-2016 RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 Gene3D G3DSA:3.30.70.1430 585 674 8.9E-7 T 23-04-2016 RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 SUPERFAMILY SSF82693 41 134 2.09E-20 T 23-04-2016 RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 Gene3D G3DSA:1.20.1640.10 287 493 3.1E-57 T 23-04-2016 RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 PANTHER PTHR32063 1 497 0.0 T 23-04-2016 RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 PANTHER PTHR32063 519 1041 0.0 T 23-04-2016 RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 Gene3D G3DSA:3.30.2090.10 184 268 3.9E-19 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 SUPERFAMILY SSF82693 136 182 6.28E-20 T 23-04-2016 RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 SUPERFAMILY SSF82693 269 325 6.28E-20 T 23-04-2016 RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 SUPERFAMILY SSF82693 582 677 4.71E-12 T 23-04-2016 RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 Gene3D G3DSA:3.30.2090.10 734 815 1.0E-20 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS20555 7aa1e18b4407336f08671fdad55565fb 1065 Gene3D G3DSA:1.10.3850.10 823 1039 1.3E-50 T 23-04-2016 RR42_RS20840 39bbbfe3d20dd22234a1fba7b228f580 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 23-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS20840 39bbbfe3d20dd22234a1fba7b228f580 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 1.0E-15 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS20840 39bbbfe3d20dd22234a1fba7b228f580 44 Pfam PF00468 Ribosomal protein L34 1 44 8.5E-23 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS20840 39bbbfe3d20dd22234a1fba7b228f580 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 3.4E-24 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS20840 39bbbfe3d20dd22234a1fba7b228f580 44 PANTHER PTHR14503 1 44 8.5E-19 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS20840 39bbbfe3d20dd22234a1fba7b228f580 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.729 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS09990 76736e6f7ddfebcb32b0f87d4cb1ea22 452 PANTHER PTHR10799 196 448 2.6E-30 T 23-04-2016 RR42_RS09990 76736e6f7ddfebcb32b0f87d4cb1ea22 452 SMART SM00267 277 449 2.7E-57 T 23-04-2016 IPR000160 GGDEF domain RR42_RS09990 76736e6f7ddfebcb32b0f87d4cb1ea22 452 SUPERFAMILY SSF55073 293 448 1.26E-45 T 23-04-2016 IPR029787 Nucleotide cyclase RR42_RS09990 76736e6f7ddfebcb32b0f87d4cb1ea22 452 Pfam PF00990 Diguanylate cyclase, GGDEF domain 289 445 2.5E-47 T 23-04-2016 IPR000160 GGDEF domain RR42_RS09990 76736e6f7ddfebcb32b0f87d4cb1ea22 452 Pfam PF17158 Membrane-associated sensor, integral membrane domain 41 274 4.0E-34 T 23-04-2016 IPR033424 Membrane-associated sensor domain RR42_RS09990 76736e6f7ddfebcb32b0f87d4cb1ea22 452 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 286 449 1.6E-49 T 23-04-2016 IPR000160 GGDEF domain RR42_RS09990 76736e6f7ddfebcb32b0f87d4cb1ea22 452 PANTHER PTHR10799:SF750 196 448 2.6E-30 T 23-04-2016 RR42_RS09990 76736e6f7ddfebcb32b0f87d4cb1ea22 452 Gene3D G3DSA:3.30.70.270 290 450 1.9E-52 T 23-04-2016 RR42_RS07555 0261845da4bbf845d7120326dc5c6de5 632 Pfam PF02705 K+ potassium transporter 21 553 1.2E-215 T 23-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 RR42_RS07555 0261845da4bbf845d7120326dc5c6de5 632 PANTHER PTHR30540:SF7 19 558 5.7E-242 T 23-04-2016 RR42_RS07555 0261845da4bbf845d7120326dc5c6de5 632 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 12 632 34.779 T 23-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup RR42_RS07555 0261845da4bbf845d7120326dc5c6de5 632 PANTHER PTHR30540 19 558 5.7E-242 T 23-04-2016 RR42_RS08985 f383e7b1df73d8c738e30aaad3997489 550 Pfam PF00990 Diguanylate cyclase, GGDEF domain 388 546 9.4E-43 T 23-04-2016 IPR000160 GGDEF domain RR42_RS08985 f383e7b1df73d8c738e30aaad3997489 550 SMART SM00091 128 196 1.6E-4 T 23-04-2016 IPR000014 PAS domain RR42_RS08985 f383e7b1df73d8c738e30aaad3997489 550 SMART SM00091 258 330 45.0 T 23-04-2016 IPR000014 PAS domain RR42_RS08985 f383e7b1df73d8c738e30aaad3997489 550 SUPERFAMILY SSF55785 137 245 3.14E-20 T 23-04-2016 IPR000014 PAS domain RR42_RS08985 f383e7b1df73d8c738e30aaad3997489 550 SUPERFAMILY SSF55073 393 548 1.14E-45 T 23-04-2016 IPR029787 Nucleotide cyclase RR42_RS08985 f383e7b1df73d8c738e30aaad3997489 550 SUPERFAMILY SSF55785 284 386 5.64E-13 T 23-04-2016 IPR000014 PAS domain RR42_RS08985 f383e7b1df73d8c738e30aaad3997489 550 SMART SM00086 203 246 1.4E-6 T 23-04-2016 IPR001610 PAC motif RR42_RS08985 f383e7b1df73d8c738e30aaad3997489 550 SMART SM00086 336 377 0.51 T 23-04-2016 IPR001610 PAC motif RR42_RS08985 f383e7b1df73d8c738e30aaad3997489 550 PANTHER PTHR10799:SF750 348 547 1.9E-23 T 23-04-2016 RR42_RS08985 f383e7b1df73d8c738e30aaad3997489 550 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 124 253 1.4E-10 T 23-04-2016 IPR000014 PAS domain RR42_RS08985 f383e7b1df73d8c738e30aaad3997489 550 SUPERFAMILY SSF55781 36 116 7.19E-7 T 23-04-2016 IPR029016 GAF domain-like RR42_RS08985 f383e7b1df73d8c738e30aaad3997489 550 Pfam PF08447 PAS fold 151 239 5.8E-24 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 RR42_RS08985 f383e7b1df73d8c738e30aaad3997489 550 Pfam PF08447 PAS fold 286 366 3.4E-9 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 RR42_RS08985 f383e7b1df73d8c738e30aaad3997489 550 PANTHER PTHR10799 348 547 1.9E-23 T 23-04-2016 RR42_RS08985 f383e7b1df73d8c738e30aaad3997489 550 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 384 548 1.9E-46 T 23-04-2016 IPR000160 GGDEF domain RR42_RS08985 f383e7b1df73d8c738e30aaad3997489 550 SMART SM00267 377 550 2.6E-52 T 23-04-2016 IPR000160 GGDEF domain RR42_RS08985 f383e7b1df73d8c738e30aaad3997489 550 Gene3D G3DSA:3.30.70.270 390 548 1.4E-48 T 23-04-2016 RR42_RS08985 f383e7b1df73d8c738e30aaad3997489 550 Gene3D G3DSA:3.30.450.20 117 261 1.7E-38 T 23-04-2016 RR42_RS08985 f383e7b1df73d8c738e30aaad3997489 550 Gene3D G3DSA:3.30.450.20 286 386 2.5E-21 T 23-04-2016 RR42_RS03425 07827d100deca58e4bc178f856d58099 302 PANTHER PTHR30419 1 289 2.2E-94 T 23-04-2016 RR42_RS03425 07827d100deca58e4bc178f856d58099 302 SUPERFAMILY SSF53850 91 292 4.15E-43 T 23-04-2016 RR42_RS03425 07827d100deca58e4bc178f856d58099 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.8E-23 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS03425 07827d100deca58e4bc178f856d58099 302 Pfam PF03466 LysR substrate binding domain 90 290 5.9E-44 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS03425 07827d100deca58e4bc178f856d58099 302 Gene3D G3DSA:1.10.10.10 4 88 7.6E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS03425 07827d100deca58e4bc178f856d58099 302 Gene3D G3DSA:3.40.190.10 92 177 6.3E-18 T 23-04-2016 RR42_RS03425 07827d100deca58e4bc178f856d58099 302 Gene3D G3DSA:3.40.190.10 178 262 2.7E-24 T 23-04-2016 RR42_RS03425 07827d100deca58e4bc178f856d58099 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.2E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS03425 07827d100deca58e4bc178f856d58099 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.2E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS03425 07827d100deca58e4bc178f856d58099 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.2E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS03425 07827d100deca58e4bc178f856d58099 302 SUPERFAMILY SSF46785 4 89 9.92E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS03425 07827d100deca58e4bc178f856d58099 302 PANTHER PTHR30419:SF3 1 289 2.2E-94 T 23-04-2016 RR42_RS17640 62ae88a243d4492efa4f45337ab9eebf 233 PANTHER PTHR30400:SF0 2 231 5.2E-66 T 23-04-2016 RR42_RS17640 62ae88a243d4492efa4f45337ab9eebf 233 PANTHER PTHR30400 2 231 5.2E-66 T 23-04-2016 RR42_RS17640 62ae88a243d4492efa4f45337ab9eebf 233 Pfam PF00912 Transglycosylase 56 226 7.5E-51 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 RR42_RS17640 62ae88a243d4492efa4f45337ab9eebf 233 Gene3D G3DSA:1.10.3810.10 57 226 3.1E-62 T 23-04-2016 RR42_RS17640 62ae88a243d4492efa4f45337ab9eebf 233 SUPERFAMILY SSF53955 55 210 1.74E-54 T 23-04-2016 IPR023346 Lysozyme-like domain RR42_RS17640 62ae88a243d4492efa4f45337ab9eebf 233 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 7 231 2.9E-97 T 23-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 RR42_RS17640 62ae88a243d4492efa4f45337ab9eebf 233 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 3 232 38.643 T 23-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 RR42_RS09785 41a68613de5e592c929e32db9d5d1040 378 Pfam PF12704 MacB-like periplasmic core domain 23 227 5.3E-8 T 23-04-2016 IPR025857 MacB-like periplasmic core domain RR42_RS09785 41a68613de5e592c929e32db9d5d1040 378 Pfam PF02687 FtsX-like permease family 258 372 7.4E-10 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RR42_RS09785 41a68613de5e592c929e32db9d5d1040 378 PANTHER PTHR30489 4 378 2.9E-26 T 23-04-2016 RR42_RS04025 f1e48ea50dba459631697694a87fa6e7 124 PRINTS PR01166 Cytochrome c oxidase subunit II signature 68 88 3.4E-7 T 23-04-2016 RR42_RS04025 f1e48ea50dba459631697694a87fa6e7 124 PRINTS PR01166 Cytochrome c oxidase subunit II signature 44 65 3.4E-7 T 23-04-2016 RR42_RS04025 f1e48ea50dba459631697694a87fa6e7 124 PRINTS PR01166 Cytochrome c oxidase subunit II signature 106 123 3.4E-7 T 23-04-2016 RR42_RS04025 f1e48ea50dba459631697694a87fa6e7 124 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 45 122 2.1E-11 T 23-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 RR42_RS04025 f1e48ea50dba459631697694a87fa6e7 124 PANTHER PTHR22888 45 123 2.6E-16 T 23-04-2016 RR42_RS04025 f1e48ea50dba459631697694a87fa6e7 124 SUPERFAMILY SSF49503 32 123 1.5E-22 T 23-04-2016 IPR008972 Cupredoxin RR42_RS04025 f1e48ea50dba459631697694a87fa6e7 124 Gene3D G3DSA:2.60.40.420 33 123 1.6E-22 T 23-04-2016 IPR008972 Cupredoxin RR42_RS04560 39c3fc8dd8873b1df010505c1f4ec7a6 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 215 1.4E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS04560 39c3fc8dd8873b1df010505c1f4ec7a6 217 Gene3D G3DSA:1.10.3720.10 7 215 5.6E-45 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS04560 39c3fc8dd8873b1df010505c1f4ec7a6 217 SUPERFAMILY SSF161098 8 210 1.22E-47 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS04560 39c3fc8dd8873b1df010505c1f4ec7a6 217 PANTHER PTHR30450:SF1 1 217 3.4E-116 T 23-04-2016 RR42_RS04560 39c3fc8dd8873b1df010505c1f4ec7a6 217 PANTHER PTHR30450 1 217 3.4E-116 T 23-04-2016 RR42_RS02715 6518488bc2ea0ccaf96d39189771bced 181 PANTHER PTHR30194 1 169 5.8E-63 T 23-04-2016 RR42_RS02715 6518488bc2ea0ccaf96d39189771bced 181 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 23-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 RR42_RS02715 6518488bc2ea0ccaf96d39189771bced 181 SUPERFAMILY SSF53098 1 156 6.83E-53 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS02715 6518488bc2ea0ccaf96d39189771bced 181 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 154 2.5E-51 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RR42_RS02715 6518488bc2ea0ccaf96d39189771bced 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 2.0E-33 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RR42_RS02715 6518488bc2ea0ccaf96d39189771bced 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 2.0E-33 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RR42_RS02715 6518488bc2ea0ccaf96d39189771bced 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 2.0E-33 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RR42_RS02715 6518488bc2ea0ccaf96d39189771bced 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 2.0E-33 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RR42_RS02715 6518488bc2ea0ccaf96d39189771bced 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 2.0E-33 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RR42_RS02715 6518488bc2ea0ccaf96d39189771bced 181 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 150 5.8E-50 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RR42_RS02715 6518488bc2ea0ccaf96d39189771bced 181 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 153 46.516 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RR42_RS02715 6518488bc2ea0ccaf96d39189771bced 181 Gene3D G3DSA:3.30.420.10 1 155 9.0E-64 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS02350 56dfb75aa5a21ef83b2b2040c48c5e16 431 PIRSF PIRSF010256 12 400 9.7E-126 T 23-04-2016 IPR011195 Uncharacterised conserved protein UCP010256 RR42_RS02350 56dfb75aa5a21ef83b2b2040c48c5e16 431 SUPERFAMILY SSF53300 228 356 6.68E-19 T 23-04-2016 IPR002035 von Willebrand factor, type A RR42_RS02350 56dfb75aa5a21ef83b2b2040c48c5e16 431 PANTHER PTHR39338 8 405 9.0E-77 T 23-04-2016 RR42_RS02350 56dfb75aa5a21ef83b2b2040c48c5e16 431 PANTHER PTHR39338:SF1 8 405 9.0E-77 T 23-04-2016 RR42_RS02350 56dfb75aa5a21ef83b2b2040c48c5e16 431 Gene3D G3DSA:3.40.50.410 229 335 5.5E-8 T 23-04-2016 IPR002035 von Willebrand factor, type A RR42_RS02350 56dfb75aa5a21ef83b2b2040c48c5e16 431 Pfam PF05762 VWA domain containing CoxE-like protein 170 390 1.1E-74 T 23-04-2016 IPR008912 Uncharacterised protein family CoxE-like RR42_RS02350 56dfb75aa5a21ef83b2b2040c48c5e16 431 SMART SM00327 226 393 8.7E-5 T 23-04-2016 IPR002035 von Willebrand factor, type A RR42_RS11740 54f77144d393dab055abbd030572e2a1 539 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 5 199 1.5E-70 T 23-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 RR42_RS11740 54f77144d393dab055abbd030572e2a1 539 PANTHER PTHR11922 1 536 1.3E-271 T 23-04-2016 RR42_RS11740 54f77144d393dab055abbd030572e2a1 539 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 209 539 6.1E-140 T 23-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 RR42_RS11740 54f77144d393dab055abbd030572e2a1 539 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 2 539 54.285 T 23-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 RR42_RS11740 54f77144d393dab055abbd030572e2a1 539 PANTHER PTHR11922:SF2 1 536 1.3E-271 T 23-04-2016 RR42_RS11740 54f77144d393dab055abbd030572e2a1 539 Gene3D G3DSA:3.30.300.10 396 539 5.9E-50 T 23-04-2016 RR42_RS11740 54f77144d393dab055abbd030572e2a1 539 Gene3D G3DSA:3.40.50.620 219 394 6.3E-58 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS11740 54f77144d393dab055abbd030572e2a1 539 Pfam PF00958 GMP synthase C terminal domain 453 538 2.4E-40 T 23-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 RR42_RS11740 54f77144d393dab055abbd030572e2a1 539 Pfam PF00117 Glutamine amidotransferase class-I 7 195 5.1E-34 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RR42_RS11740 54f77144d393dab055abbd030572e2a1 539 SUPERFAMILY SSF52402 192 414 3.53E-58 T 23-04-2016 RR42_RS11740 54f77144d393dab055abbd030572e2a1 539 Pfam PF02540 NAD synthase 211 249 7.9E-7 T 23-04-2016 IPR022310 NAD/GMP synthase RR42_RS11740 54f77144d393dab055abbd030572e2a1 539 SUPERFAMILY SSF54810 400 539 3.53E-44 T 23-04-2016 RR42_RS11740 54f77144d393dab055abbd030572e2a1 539 Gene3D G3DSA:3.40.50.880 2 218 5.9E-57 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RR42_RS11740 54f77144d393dab055abbd030572e2a1 539 SUPERFAMILY SSF52317 1 232 3.12E-55 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RR42_RS20330 c299a5fe0ea163bc7e71716fa05f3f9b 202 Gene3D G3DSA:3.40.190.10 83 165 2.0E-8 T 23-04-2016 RR42_RS20330 c299a5fe0ea163bc7e71716fa05f3f9b 202 PANTHER PTHR30537:SF5 3 198 8.9E-63 T 23-04-2016 RR42_RS20330 c299a5fe0ea163bc7e71716fa05f3f9b 202 PANTHER PTHR30537 3 198 8.9E-63 T 23-04-2016 RR42_RS20330 c299a5fe0ea163bc7e71716fa05f3f9b 202 SUPERFAMILY SSF53850 5 198 1.12E-42 T 23-04-2016 RR42_RS20330 c299a5fe0ea163bc7e71716fa05f3f9b 202 Pfam PF03466 LysR substrate binding domain 5 197 1.4E-41 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS20330 c299a5fe0ea163bc7e71716fa05f3f9b 202 Gene3D G3DSA:3.40.190.10 6 82 1.0E-21 T 23-04-2016 RR42_RS18710 c90df01c08f51ae5393160c568b6d381 332 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 22 178 4.0E-46 T 23-04-2016 IPR017482 Putative phage-type endonuclease RR42_RS18710 c90df01c08f51ae5393160c568b6d381 332 Pfam PF09588 YqaJ-like viral recombinase domain 28 168 5.0E-38 T 23-04-2016 IPR019080 YqaJ viral recombinase RR42_RS18710 c90df01c08f51ae5393160c568b6d381 332 SUPERFAMILY SSF52980 26 214 2.95E-36 T 23-04-2016 IPR011335 Restriction endonuclease type II-like RR42_RS18710 c90df01c08f51ae5393160c568b6d381 332 Gene3D G3DSA:3.90.320.10 25 210 3.8E-31 T 23-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 RR42_RS09980 68a51747bf52fe7a9314d20c8cbbd3be 1112 PANTHER PTHR10799 693 942 5.6E-91 T 23-04-2016 RR42_RS09980 68a51747bf52fe7a9314d20c8cbbd3be 1112 SUPERFAMILY SSF141868 847 1098 1.7E-94 T 23-04-2016 IPR001633 EAL domain RR42_RS09980 68a51747bf52fe7a9314d20c8cbbd3be 1112 Pfam PF13185 GAF domain 520 656 1.3E-6 T 23-04-2016 IPR003018 GAF domain GO:0005515 RR42_RS09980 68a51747bf52fe7a9314d20c8cbbd3be 1112 Gene3D G3DSA:3.30.450.40 512 668 3.2E-10 T 23-04-2016 IPR029016 GAF domain-like RR42_RS09980 68a51747bf52fe7a9314d20c8cbbd3be 1112 Gene3D G3DSA:3.30.450.20 379 497 6.2E-13 T 23-04-2016 RR42_RS09980 68a51747bf52fe7a9314d20c8cbbd3be 1112 Gene3D G3DSA:3.20.20.450 846 1095 1.1E-103 T 23-04-2016 IPR001633 EAL domain RR42_RS09980 68a51747bf52fe7a9314d20c8cbbd3be 1112 Pfam PF03924 CHASE domain 85 271 4.2E-40 T 23-04-2016 IPR006189 CHASE domain RR42_RS09980 68a51747bf52fe7a9314d20c8cbbd3be 1112 SUPERFAMILY SSF55073 676 832 1.02E-46 T 23-04-2016 IPR029787 Nucleotide cyclase RR42_RS09980 68a51747bf52fe7a9314d20c8cbbd3be 1112 Gene3D G3DSA:3.30.70.270 672 837 8.2E-56 T 23-04-2016 RR42_RS09980 68a51747bf52fe7a9314d20c8cbbd3be 1112 SMART SM00052 842 1088 1.9E-125 T 23-04-2016 IPR001633 EAL domain RR42_RS09980 68a51747bf52fe7a9314d20c8cbbd3be 1112 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 669 830 8.1E-42 T 23-04-2016 IPR000160 GGDEF domain RR42_RS09980 68a51747bf52fe7a9314d20c8cbbd3be 1112 SMART SM01079 82 284 1.7E-50 T 23-04-2016 IPR006189 CHASE domain RR42_RS09980 68a51747bf52fe7a9314d20c8cbbd3be 1112 Pfam PF00990 Diguanylate cyclase, GGDEF domain 671 827 2.4E-47 T 23-04-2016 IPR000160 GGDEF domain RR42_RS09980 68a51747bf52fe7a9314d20c8cbbd3be 1112 PANTHER PTHR10799:SF774 693 942 5.6E-91 T 23-04-2016 RR42_RS09980 68a51747bf52fe7a9314d20c8cbbd3be 1112 SMART SM00267 660 832 4.1E-57 T 23-04-2016 IPR000160 GGDEF domain RR42_RS09980 68a51747bf52fe7a9314d20c8cbbd3be 1112 SUPERFAMILY SSF55781 523 668 5.64E-10 T 23-04-2016 IPR029016 GAF domain-like RR42_RS09980 68a51747bf52fe7a9314d20c8cbbd3be 1112 SUPERFAMILY SSF55785 379 497 1.92E-11 T 23-04-2016 IPR000014 PAS domain RR42_RS09980 68a51747bf52fe7a9314d20c8cbbd3be 1112 Pfam PF00563 EAL domain 850 1083 6.4E-75 T 23-04-2016 IPR001633 EAL domain RR42_RS02380 7fb9536c04597d254800c9d3428c950e 1324 Pfam PF01565 FAD binding domain 193 338 1.2E-22 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RR42_RS02380 7fb9536c04597d254800c9d3428c950e 1324 SUPERFAMILY SSF55103 697 818 4.47E-38 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RR42_RS02380 7fb9536c04597d254800c9d3428c950e 1324 SUPERFAMILY SSF55103 429 559 4.47E-38 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RR42_RS02380 7fb9536c04597d254800c9d3428c950e 1324 Pfam PF02913 FAD linked oxidases, C-terminal domain 728 815 2.7E-17 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RR42_RS02380 7fb9536c04597d254800c9d3428c950e 1324 Pfam PF02913 FAD linked oxidases, C-terminal domain 461 576 4.2E-4 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RR42_RS02380 7fb9536c04597d254800c9d3428c950e 1324 SUPERFAMILY SSF46548 825 947 6.54E-14 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RR42_RS02380 7fb9536c04597d254800c9d3428c950e 1324 Pfam PF13183 4Fe-4S dicluster domain 851 930 2.4E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RR42_RS02380 7fb9536c04597d254800c9d3428c950e 1324 PANTHER PTHR11748 385 483 1.0E-31 T 23-04-2016 RR42_RS02380 7fb9536c04597d254800c9d3428c950e 1324 PANTHER PTHR11748 162 341 1.0E-31 T 23-04-2016 RR42_RS02380 7fb9536c04597d254800c9d3428c950e 1324 PANTHER PTHR11748 563 863 1.0E-31 T 23-04-2016 RR42_RS02380 7fb9536c04597d254800c9d3428c950e 1324 Gene3D G3DSA:3.30.43.10 153 309 6.4E-31 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RR42_RS02380 7fb9536c04597d254800c9d3428c950e 1324 PANTHER PTHR11748:SF35 385 483 1.0E-31 T 23-04-2016 RR42_RS02380 7fb9536c04597d254800c9d3428c950e 1324 PANTHER PTHR11748:SF35 162 341 1.0E-31 T 23-04-2016 RR42_RS02380 7fb9536c04597d254800c9d3428c950e 1324 PANTHER PTHR11748:SF35 563 863 1.0E-31 T 23-04-2016 RR42_RS02380 7fb9536c04597d254800c9d3428c950e 1324 SUPERFAMILY SSF56176 158 424 3.03E-54 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RR42_RS02380 7fb9536c04597d254800c9d3428c950e 1324 Pfam PF12447 Protein of unknown function (DUF3683) 19 143 1.5E-52 T 23-04-2016 IPR022153 Protein of unknown function DUF3683 RR42_RS02380 7fb9536c04597d254800c9d3428c950e 1324 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 916 927 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RR42_RS02380 7fb9536c04597d254800c9d3428c950e 1324 Pfam PF02754 Cysteine-rich domain 1061 1150 1.7E-6 T 23-04-2016 IPR004017 Cysteine-rich domain RR42_RS02380 7fb9536c04597d254800c9d3428c950e 1324 Pfam PF02754 Cysteine-rich domain 1186 1277 4.5E-5 T 23-04-2016 IPR004017 Cysteine-rich domain RR42_RS02380 7fb9536c04597d254800c9d3428c950e 1324 Pfam PF11880 Domain of unknown function (DUF3400) 1280 1324 5.7E-25 T 23-04-2016 IPR021817 Protein of unknown function DUF3400 RR42_RS02380 7fb9536c04597d254800c9d3428c950e 1324 Gene3D G3DSA:1.10.1060.10 847 949 4.0E-14 T 23-04-2016 RR42_RS14735 e1722dbeaf1efacad70c15e61146f6e4 232 Pfam PF03741 Integral membrane protein TerC family 18 188 2.4E-42 T 23-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 RR42_RS14735 e1722dbeaf1efacad70c15e61146f6e4 232 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 15 188 3.1E-67 T 23-04-2016 IPR022301 Integral membrane protein YjbE RR42_RS14735 e1722dbeaf1efacad70c15e61146f6e4 232 PANTHER PTHR30060 1 227 1.3E-42 T 23-04-2016 RR42_RS00925 cf5306196cf0aed161f0c7bc21e3c661 495 PIRSF PIRSF000521 44 471 5.0E-24 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RR42_RS00925 cf5306196cf0aed161f0c7bc21e3c661 495 PANTHER PTHR11986:SF8 23 476 8.7E-153 T 23-04-2016 RR42_RS00925 cf5306196cf0aed161f0c7bc21e3c661 495 SUPERFAMILY SSF53383 26 469 2.95E-111 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS00925 cf5306196cf0aed161f0c7bc21e3c661 495 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 29 458 6.3E-145 T 23-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 RR42_RS00925 cf5306196cf0aed161f0c7bc21e3c661 495 PANTHER PTHR11986 23 476 8.7E-153 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RR42_RS00925 cf5306196cf0aed161f0c7bc21e3c661 495 Pfam PF00202 Aminotransferase class-III 43 467 1.6E-105 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RR42_RS00925 cf5306196cf0aed161f0c7bc21e3c661 495 Gene3D G3DSA:3.90.1150.10 373 471 6.3E-40 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS00925 cf5306196cf0aed161f0c7bc21e3c661 495 Gene3D G3DSA:3.90.1150.10 22 79 6.3E-40 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS00925 cf5306196cf0aed161f0c7bc21e3c661 495 Gene3D G3DSA:3.40.640.10 80 370 5.8E-83 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS15600 1a46a982c21e2c06af824b57a96ecade 218 Pfam PF13410 Glutathione S-transferase, C-terminal domain 129 203 2.9E-7 T 23-04-2016 RR42_RS15600 1a46a982c21e2c06af824b57a96ecade 218 SUPERFAMILY SSF47616 85 205 1.56E-20 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS15600 1a46a982c21e2c06af824b57a96ecade 218 Gene3D G3DSA:1.20.1050.10 97 208 4.6E-40 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS15600 1a46a982c21e2c06af824b57a96ecade 218 PANTHER PTHR11260 1 199 3.8E-55 T 23-04-2016 RR42_RS15600 1a46a982c21e2c06af824b57a96ecade 218 PANTHER PTHR11260:SF144 1 199 3.8E-55 T 23-04-2016 RR42_RS15600 1a46a982c21e2c06af824b57a96ecade 218 Pfam PF13417 Glutathione S-transferase, N-terminal domain 12 81 1.3E-8 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RR42_RS15600 1a46a982c21e2c06af824b57a96ecade 218 SUPERFAMILY SSF52833 6 87 4.94E-16 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS15600 1a46a982c21e2c06af824b57a96ecade 218 Gene3D G3DSA:3.40.30.10 5 96 2.4E-14 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS14030 79c059bf34a372e31d3f8df9f2d2b51c 292 Hamap MF_00201 DNA repair protein RecO [recO]. 57 289 23.151 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RR42_RS14030 79c059bf34a372e31d3f8df9f2d2b51c 292 PANTHER PTHR33991 57 289 4.0E-50 T 23-04-2016 RR42_RS14030 79c059bf34a372e31d3f8df9f2d2b51c 292 Pfam PF11967 Recombination protein O N terminal 60 133 3.3E-23 T 23-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal RR42_RS14030 79c059bf34a372e31d3f8df9f2d2b51c 292 SUPERFAMILY SSF50249 58 132 9.08E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS14030 79c059bf34a372e31d3f8df9f2d2b51c 292 TIGRFAM TIGR00613 reco: DNA repair protein RecO 61 234 5.7E-32 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RR42_RS14030 79c059bf34a372e31d3f8df9f2d2b51c 292 SUPERFAMILY SSF57863 142 270 6.02E-10 T 23-04-2016 RR42_RS14030 79c059bf34a372e31d3f8df9f2d2b51c 292 Gene3D G3DSA:2.40.50.140 57 132 1.5E-9 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS14030 79c059bf34a372e31d3f8df9f2d2b51c 292 Pfam PF02565 Recombination protein O C terminal 140 283 6.6E-22 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RR42_RS10785 d2d3127e3b804b1949288e4a9e6b876b 471 PANTHER PTHR11751:SF314 86 465 1.0E-166 T 23-04-2016 RR42_RS10785 d2d3127e3b804b1949288e4a9e6b876b 471 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 2.9E-14 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS10785 d2d3127e3b804b1949288e4a9e6b876b 471 Gene3D G3DSA:3.90.1150.10 350 465 1.2E-5 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS10785 d2d3127e3b804b1949288e4a9e6b876b 471 PANTHER PTHR11751 86 465 1.0E-166 T 23-04-2016 RR42_RS10785 d2d3127e3b804b1949288e4a9e6b876b 471 Gene3D G3DSA:1.10.10.10 1 68 2.2E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS10785 d2d3127e3b804b1949288e4a9e6b876b 471 SUPERFAMILY SSF53383 97 467 5.24E-94 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS10785 d2d3127e3b804b1949288e4a9e6b876b 471 Pfam PF00155 Aminotransferase class I and II 148 459 1.9E-25 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RR42_RS10785 d2d3127e3b804b1949288e4a9e6b876b 471 SMART SM00345 7 66 6.8E-14 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS10785 d2d3127e3b804b1949288e4a9e6b876b 471 Gene3D G3DSA:3.40.640.10 145 349 7.1E-70 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS10785 d2d3127e3b804b1949288e4a9e6b876b 471 SUPERFAMILY SSF46785 2 75 5.13E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS15775 94d97b442eda37a9d5d78014b5a4792d 349 Gene3D G3DSA:3.90.1210.10 292 348 1.3E-20 T 23-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal RR42_RS15775 94d97b442eda37a9d5d78014b5a4792d 349 PANTHER PTHR23416 3 301 2.1E-95 T 23-04-2016 RR42_RS15775 94d97b442eda37a9d5d78014b5a4792d 349 Gene3D G3DSA:3.20.20.70 3 274 5.2E-106 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS15775 94d97b442eda37a9d5d78014b5a4792d 349 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 16 343 4.5E-150 T 23-04-2016 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 RR42_RS15775 94d97b442eda37a9d5d78014b5a4792d 349 SUPERFAMILY SSF51269 286 348 5.36E-18 T 23-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal RR42_RS15775 94d97b442eda37a9d5d78014b5a4792d 349 Pfam PF03102 NeuB family 36 276 1.2E-87 T 23-04-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 RR42_RS15775 94d97b442eda37a9d5d78014b5a4792d 349 SUPERFAMILY SSF51569 2 301 7.33E-90 T 23-04-2016 RR42_RS15775 94d97b442eda37a9d5d78014b5a4792d 349 PANTHER PTHR23416:SF62 3 301 2.1E-95 T 23-04-2016 RR42_RS15775 94d97b442eda37a9d5d78014b5a4792d 349 SMART SM00858 291 349 1.8E-11 T 23-04-2016 IPR013974 SAF domain RR42_RS15775 94d97b442eda37a9d5d78014b5a4792d 349 Pfam PF08666 SAF domain 292 348 1.1E-11 T 23-04-2016 IPR013974 SAF domain RR42_RS12725 756665038cb70f6a1207f677208da4ae 865 SUPERFAMILY SSF49879 128 235 4.21E-18 T 23-04-2016 IPR008984 SMAD/FHA domain GO:0005515 RR42_RS12725 756665038cb70f6a1207f677208da4ae 865 Gene3D G3DSA:2.60.200.20 136 233 1.6E-17 T 23-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RR42_RS12725 756665038cb70f6a1207f677208da4ae 865 Pfam PF00498 FHA domain 44 109 8.0E-14 T 23-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RR42_RS12725 756665038cb70f6a1207f677208da4ae 865 Pfam PF00498 FHA domain 176 226 1.5E-11 T 23-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RR42_RS12725 756665038cb70f6a1207f677208da4ae 865 PANTHER PTHR15715 21 123 1.1E-14 T 23-04-2016 RR42_RS12725 756665038cb70f6a1207f677208da4ae 865 SMART SM00240 40 93 1.6E-6 T 23-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RR42_RS12725 756665038cb70f6a1207f677208da4ae 865 SMART SM00240 154 210 5.6E-8 T 23-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RR42_RS12725 756665038cb70f6a1207f677208da4ae 865 Gene3D G3DSA:2.60.200.20 23 116 1.6E-18 T 23-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RR42_RS12725 756665038cb70f6a1207f677208da4ae 865 SUPERFAMILY SSF49879 30 118 8.42E-18 T 23-04-2016 IPR008984 SMAD/FHA domain GO:0005515 RR42_RS01340 86144a2f20114114922d2909ccf70950 340 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 65 335 1.8E-79 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS01340 86144a2f20114114922d2909ccf70950 340 PIRSF PIRSF017082 9 339 4.1E-81 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS01340 86144a2f20114114922d2909ccf70950 340 PANTHER PTHR30349:SF16 11 297 6.1E-86 T 23-04-2016 RR42_RS01340 86144a2f20114114922d2909ccf70950 340 PANTHER PTHR30349 11 297 6.1E-86 T 23-04-2016 RR42_RS01340 86144a2f20114114922d2909ccf70950 340 SUPERFAMILY SSF53850 128 288 4.34E-12 T 23-04-2016 RR42_RS04430 359a3333e1f46bc882f815f482a0c790 223 PANTHER PTHR18901 6 220 3.1E-89 T 23-04-2016 RR42_RS04430 359a3333e1f46bc882f815f482a0c790 223 PANTHER PTHR18901:SF24 6 220 3.1E-89 T 23-04-2016 RR42_RS04430 359a3333e1f46bc882f815f482a0c790 223 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 186 2.4E-33 T 23-04-2016 IPR023214 HAD-like domain RR42_RS04430 359a3333e1f46bc882f815f482a0c790 223 Gene3D G3DSA:3.40.50.1000 83 217 3.7E-43 T 23-04-2016 IPR023214 HAD-like domain RR42_RS04430 359a3333e1f46bc882f815f482a0c790 223 Gene3D G3DSA:3.40.50.1000 1 20 3.7E-43 T 23-04-2016 IPR023214 HAD-like domain RR42_RS04430 359a3333e1f46bc882f815f482a0c790 223 Gene3D G3DSA:1.10.150.240 21 82 2.1E-10 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RR42_RS04430 359a3333e1f46bc882f815f482a0c790 223 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 93 181 1.3E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS04430 359a3333e1f46bc882f815f482a0c790 223 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 93 185 9.7E-10 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS04430 359a3333e1f46bc882f815f482a0c790 223 SUPERFAMILY SSF56784 4 217 1.63E-61 T 23-04-2016 IPR023214 HAD-like domain RR42_RS04430 359a3333e1f46bc882f815f482a0c790 223 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 7 217 6.3E-59 T 23-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 RR42_RS15830 b2a64fa396c6c6fc440b0ab081827f39 183 PANTHER PTHR21047 8 182 6.0E-70 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 RR42_RS15830 b2a64fa396c6c6fc440b0ab081827f39 183 Gene3D G3DSA:2.60.120.10 4 180 4.6E-77 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS15830 b2a64fa396c6c6fc440b0ab081827f39 183 SUPERFAMILY SSF51182 3 180 2.77E-72 T 23-04-2016 IPR011051 RmlC-like cupin domain RR42_RS15830 b2a64fa396c6c6fc440b0ab081827f39 183 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 8 177 6.4E-70 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 RR42_RS15830 b2a64fa396c6c6fc440b0ab081827f39 183 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 6 180 1.3E-76 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 RR42_RS15830 b2a64fa396c6c6fc440b0ab081827f39 183 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 3 183 3.0E-65 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 RR42_RS11515 24f3335158e13f29812a5dec4ef0f89d 336 TIGRFAM TIGR03866 PQQ_ABC_repeats: PQQ-dependent catabolism-associated beta-propeller protein 33 334 4.5E-98 T 23-04-2016 IPR022456 PQQ-dependent catabolism-associated beta-propeller protein RR42_RS11515 24f3335158e13f29812a5dec4ef0f89d 336 SUPERFAMILY SSF50974 16 334 4.97E-72 T 23-04-2016 IPR011045 Nitrous oxide reductase, N-terminal RR42_RS11515 24f3335158e13f29812a5dec4ef0f89d 336 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 160 199 3.1E-11 T 23-04-2016 IPR011964 YVTN beta-propeller repeat RR42_RS11515 24f3335158e13f29812a5dec4ef0f89d 336 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 295 335 2.4E-10 T 23-04-2016 IPR011964 YVTN beta-propeller repeat RR42_RS11515 24f3335158e13f29812a5dec4ef0f89d 336 PANTHER PTHR13833 69 335 6.3E-33 T 23-04-2016 RR42_RS11515 24f3335158e13f29812a5dec4ef0f89d 336 Pfam PF10282 Lactonase, 7-bladed beta-propeller 157 314 2.3E-9 T 23-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 RR42_RS11515 24f3335158e13f29812a5dec4ef0f89d 336 Gene3D G3DSA:2.130.10.10 34 334 1.4E-73 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RR42_RS13610 eb3c1972881b447582f7af7737092802 273 Pfam PF09339 IclR helix-turn-helix domain 19 68 1.2E-14 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RR42_RS13610 eb3c1972881b447582f7af7737092802 273 Gene3D G3DSA:1.10.10.10 11 85 6.4E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS13610 eb3c1972881b447582f7af7737092802 273 PANTHER PTHR30136 6 272 3.9E-95 T 23-04-2016 RR42_RS13610 eb3c1972881b447582f7af7737092802 273 SUPERFAMILY SSF46785 16 89 4.56E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS13610 eb3c1972881b447582f7af7737092802 273 SMART SM00346 16 106 3.0E-24 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RR42_RS13610 eb3c1972881b447582f7af7737092802 273 SUPERFAMILY SSF55781 82 263 6.28E-45 T 23-04-2016 IPR029016 GAF domain-like RR42_RS13610 eb3c1972881b447582f7af7737092802 273 PANTHER PTHR30136:SF10 6 272 3.9E-95 T 23-04-2016 RR42_RS13610 eb3c1972881b447582f7af7737092802 273 Gene3D G3DSA:3.30.450.40 86 265 4.1E-49 T 23-04-2016 IPR029016 GAF domain-like RR42_RS13610 eb3c1972881b447582f7af7737092802 273 Pfam PF01614 Bacterial transcriptional regulator 137 258 1.7E-23 T 23-04-2016 IPR014757 Transcription regulator IclR, C-terminal RR42_RS12430 53bdcfb7325b95135d483f1893b128a7 300 Gene3D G3DSA:1.10.10.10 4 88 3.4E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS12430 53bdcfb7325b95135d483f1893b128a7 300 Gene3D G3DSA:3.40.190.10 93 179 3.5E-14 T 23-04-2016 RR42_RS12430 53bdcfb7325b95135d483f1893b128a7 300 PANTHER PTHR30419 1 299 4.4E-66 T 23-04-2016 RR42_RS12430 53bdcfb7325b95135d483f1893b128a7 300 SUPERFAMILY SSF46785 4 89 2.25E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS12430 53bdcfb7325b95135d483f1893b128a7 300 SUPERFAMILY SSF53850 91 299 5.31E-36 T 23-04-2016 RR42_RS12430 53bdcfb7325b95135d483f1893b128a7 300 PANTHER PTHR30419:SF2 1 299 4.4E-66 T 23-04-2016 RR42_RS12430 53bdcfb7325b95135d483f1893b128a7 300 Pfam PF03466 LysR substrate binding domain 91 298 4.0E-29 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS12430 53bdcfb7325b95135d483f1893b128a7 300 Gene3D G3DSA:3.40.190.10 180 267 6.8E-15 T 23-04-2016 RR42_RS12430 53bdcfb7325b95135d483f1893b128a7 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 5.3E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS11535 85a5b5e94101767bb6068057f63d258e 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 421 3.1E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS11535 85a5b5e94101767bb6068057f63d258e 471 SUPERFAMILY SSF55874 354 436 3.16E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS11535 85a5b5e94101767bb6068057f63d258e 471 SMART SM00304 177 229 3.6E-5 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS11535 85a5b5e94101767bb6068057f63d258e 471 Pfam PF07730 Histidine kinase 245 309 1.6E-11 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RR42_RS11535 85a5b5e94101767bb6068057f63d258e 471 Gene3D G3DSA:3.30.565.10 359 409 8.3E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS11535 85a5b5e94101767bb6068057f63d258e 471 PANTHER PTHR24421 1 77 1.0E-29 T 23-04-2016 RR42_RS11535 85a5b5e94101767bb6068057f63d258e 471 PANTHER PTHR24421 240 468 1.0E-29 T 23-04-2016 RR42_RS06045 b65ecdd0d9034a2cfd29ce11cd63e206 172 Pfam PF07743 HSCB C-terminal oligomerisation domain 89 162 3.3E-18 T 23-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 RR42_RS06045 b65ecdd0d9034a2cfd29ce11cd63e206 172 PANTHER PTHR14021 4 160 6.0E-46 T 23-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 RR42_RS06045 b65ecdd0d9034a2cfd29ce11cd63e206 172 Gene3D G3DSA:1.20.1280.20 83 170 3.1E-25 T 23-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 RR42_RS06045 b65ecdd0d9034a2cfd29ce11cd63e206 172 SUPERFAMILY SSF46565 4 76 3.93E-17 T 23-04-2016 IPR001623 DnaJ domain RR42_RS06045 b65ecdd0d9034a2cfd29ce11cd63e206 172 SMART SM00271 3 68 7.1E-4 T 23-04-2016 IPR001623 DnaJ domain RR42_RS06045 b65ecdd0d9034a2cfd29ce11cd63e206 172 PANTHER PTHR14021:SF15 4 160 6.0E-46 T 23-04-2016 RR42_RS06045 b65ecdd0d9034a2cfd29ce11cd63e206 172 SUPERFAMILY SSF47144 79 170 7.06E-24 T 23-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 RR42_RS06045 b65ecdd0d9034a2cfd29ce11cd63e206 172 Gene3D G3DSA:1.10.287.110 2 74 1.2E-25 T 23-04-2016 IPR001623 DnaJ domain RR42_RS06045 b65ecdd0d9034a2cfd29ce11cd63e206 172 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 15 169 1.3E-30 T 23-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 RR42_RS06045 b65ecdd0d9034a2cfd29ce11cd63e206 172 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 3 171 23.073 T 23-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 RR42_RS04185 d83c4120d0e67343ac478a054b9e681f 458 SUPERFAMILY SSF46689 355 444 6.27E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS04185 d83c4120d0e67343ac478a054b9e681f 458 Gene3D G3DSA:3.40.50.300 142 316 1.6E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04185 d83c4120d0e67343ac478a054b9e681f 458 Gene3D G3DSA:1.10.8.60 317 391 2.0E-21 T 23-04-2016 RR42_RS04185 d83c4120d0e67343ac478a054b9e681f 458 SUPERFAMILY SSF52540 144 385 1.7E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04185 d83c4120d0e67343ac478a054b9e681f 458 Gene3D G3DSA:1.10.10.60 394 444 2.6E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS04185 d83c4120d0e67343ac478a054b9e681f 458 SUPERFAMILY SSF52172 21 188 2.01E-6 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS04185 d83c4120d0e67343ac478a054b9e681f 458 SMART SM00382 164 307 2.6E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS04185 d83c4120d0e67343ac478a054b9e681f 458 Pfam PF00158 Sigma-54 interaction domain 144 310 6.2E-67 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RR42_RS04185 d83c4120d0e67343ac478a054b9e681f 458 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RR42_RS04185 d83c4120d0e67343ac478a054b9e681f 458 PANTHER PTHR32071 138 455 7.4E-138 T 23-04-2016 RR42_RS04185 d83c4120d0e67343ac478a054b9e681f 458 Pfam PF02954 Bacterial regulatory protein, Fis family 403 441 3.1E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS04185 d83c4120d0e67343ac478a054b9e681f 458 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RR42_RS04020 961d7f1cc495bf3d56ee66026cb65d57 293 SUPERFAMILY SSF56300 35 277 6.94E-43 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS04020 961d7f1cc495bf3d56ee66026cb65d57 293 Gene3D G3DSA:3.60.21.10 33 277 2.7E-32 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS04020 961d7f1cc495bf3d56ee66026cb65d57 293 PANTHER PTHR22953 22 225 1.1E-16 T 23-04-2016 RR42_RS04020 961d7f1cc495bf3d56ee66026cb65d57 293 Pfam PF00149 Calcineurin-like phosphoesterase 38 226 5.9E-11 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RR42_RS17080 6141722ac986b76040c1f8ebe5abc4c7 398 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 185 366 4.2E-66 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 RR42_RS17080 6141722ac986b76040c1f8ebe5abc4c7 398 Gene3D G3DSA:3.40.50.1950 2 185 1.0E-65 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 RR42_RS17080 6141722ac986b76040c1f8ebe5abc4c7 398 SUPERFAMILY SSF102645 177 394 1.44E-71 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 RR42_RS17080 6141722ac986b76040c1f8ebe5abc4c7 398 PANTHER PTHR14359 1 394 1.3E-168 T 23-04-2016 RR42_RS17080 6141722ac986b76040c1f8ebe5abc4c7 398 Pfam PF02441 Flavoprotein 6 134 2.2E-35 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 RR42_RS17080 6141722ac986b76040c1f8ebe5abc4c7 398 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 390 1.3E-126 T 23-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 RR42_RS17080 6141722ac986b76040c1f8ebe5abc4c7 398 Gene3D G3DSA:3.40.50.10300 186 395 5.9E-82 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 RR42_RS17080 6141722ac986b76040c1f8ebe5abc4c7 398 PANTHER PTHR14359:SF20 1 394 1.3E-168 T 23-04-2016 RR42_RS17080 6141722ac986b76040c1f8ebe5abc4c7 398 SUPERFAMILY SSF52507 3 181 2.22E-59 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 RR42_RS09580 3eac992739f71181c79625316be0d15d 93 Gene3D G3DSA:3.30.160.140 3 75 1.4E-8 T 23-04-2016 IPR009962 Protein of unknown function DUF1488 RR42_RS09580 3eac992739f71181c79625316be0d15d 93 SUPERFAMILY SSF160272 3 91 3.53E-15 T 23-04-2016 IPR009962 Protein of unknown function DUF1488 RR42_RS09580 3eac992739f71181c79625316be0d15d 93 Pfam PF07369 Protein of unknown function (DUF1488) 5 82 2.9E-21 T 23-04-2016 IPR009962 Protein of unknown function DUF1488 RR42_RS11560 4c188a610e423baa09d397bf4954f87d 734 SUPERFAMILY SSF82784 1 127 4.32E-19 T 23-04-2016 IPR003718 OsmC/Ohr family RR42_RS11560 4c188a610e423baa09d397bf4954f87d 734 PANTHER PTHR39624 10 142 7.5E-17 T 23-04-2016 RR42_RS11560 4c188a610e423baa09d397bf4954f87d 734 Pfam PF02566 OsmC-like protein 32 126 3.8E-9 T 23-04-2016 IPR003718 OsmC/Ohr family RR42_RS11560 4c188a610e423baa09d397bf4954f87d 734 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 159 551 7.5E-94 T 23-04-2016 IPR003776 YcaO-like domain RR42_RS11560 4c188a610e423baa09d397bf4954f87d 734 Gene3D G3DSA:3.30.300.20 1 127 4.9E-29 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta RR42_RS11560 4c188a610e423baa09d397bf4954f87d 734 TIGRFAM TIGR03549 TIGR03549: YcaO domain protein 2 727 0.0 T 23-04-2016 IPR019938 YcaO domain protein RR42_RS11560 4c188a610e423baa09d397bf4954f87d 734 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 205 540 9.8E-70 T 23-04-2016 IPR003776 YcaO-like domain RR42_RS04715 6d23d1ea5c0ae344de1eb301da234923 252 PANTHER PTHR21043 1 106 1.1E-33 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RR42_RS04715 6d23d1ea5c0ae344de1eb301da234923 252 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 3.6E-33 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RR42_RS04715 6d23d1ea5c0ae344de1eb301da234923 252 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 23.194 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RR42_RS04715 6d23d1ea5c0ae344de1eb301da234923 252 SUPERFAMILY SSF81301 1 109 1.24E-35 T 23-04-2016 RR42_RS04715 6d23d1ea5c0ae344de1eb301da234923 252 Pfam PF02410 Ribosomal silencing factor during starvation 9 104 1.6E-25 T 23-04-2016 RR42_RS04715 6d23d1ea5c0ae344de1eb301da234923 252 Gene3D G3DSA:3.30.460.10 2 107 9.4E-37 T 23-04-2016 RR42_RS03115 861fbb9a4860c3560d0d39ad1a64e933 626 Pfam PF04932 O-Antigen ligase 214 396 2.6E-18 T 23-04-2016 IPR007016 O-antigen ligase-related RR42_RS03115 861fbb9a4860c3560d0d39ad1a64e933 626 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 426 593 1.4E-40 T 23-04-2016 IPR021797 Virulence factor membrane-bound polymerase, C-terminal RR42_RS03115 861fbb9a4860c3560d0d39ad1a64e933 626 Pfam PF15864 Protein glycosylation ligase 177 201 2.2E-8 T 23-04-2016 IPR031726 Protein glycosylation ligase domain RR42_RS01655 bce66dbb259f688c8eaff3a252e22f2f 416 Gene3D G3DSA:3.30.300.30 319 403 3.9E-11 T 23-04-2016 RR42_RS01655 bce66dbb259f688c8eaff3a252e22f2f 416 PANTHER PTHR36932:SF1 6 346 6.5E-69 T 23-04-2016 RR42_RS01655 bce66dbb259f688c8eaff3a252e22f2f 416 Pfam PF00501 AMP-binding enzyme 120 275 3.1E-13 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS01655 bce66dbb259f688c8eaff3a252e22f2f 416 SUPERFAMILY SSF56801 104 409 7.98E-35 T 23-04-2016 RR42_RS01655 bce66dbb259f688c8eaff3a252e22f2f 416 PANTHER PTHR36932 6 346 6.5E-69 T 23-04-2016 RR42_RS01655 bce66dbb259f688c8eaff3a252e22f2f 416 Gene3D G3DSA:3.40.50.980 116 238 2.5E-8 T 23-04-2016 RR42_RS02185 eb58595b86ab731f8efe3eaf5906f976 575 Pfam PF02910 Fumarate reductase flavoprotein C-term 446 567 2.1E-22 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RR42_RS02185 eb58595b86ab731f8efe3eaf5906f976 575 PIRSF PIRSF000171 1 567 8.7E-40 T 23-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit RR42_RS02185 eb58595b86ab731f8efe3eaf5906f976 575 SUPERFAMILY SSF51905 3 250 2.52E-56 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS02185 eb58595b86ab731f8efe3eaf5906f976 575 SUPERFAMILY SSF51905 357 423 2.52E-56 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS02185 eb58595b86ab731f8efe3eaf5906f976 575 Gene3D G3DSA:3.90.700.10 239 349 4.7E-30 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RR42_RS02185 eb58595b86ab731f8efe3eaf5906f976 575 Gene3D G3DSA:3.50.50.60 2 238 5.4E-81 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS02185 eb58595b86ab731f8efe3eaf5906f976 575 Gene3D G3DSA:3.50.50.60 350 412 5.4E-81 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS02185 eb58595b86ab731f8efe3eaf5906f976 575 Gene3D G3DSA:1.20.58.100 441 532 1.4E-24 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RR42_RS02185 eb58595b86ab731f8efe3eaf5906f976 575 Pfam PF00890 FAD binding domain 10 392 1.0E-73 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RR42_RS02185 eb58595b86ab731f8efe3eaf5906f976 575 SUPERFAMILY SSF46977 444 568 1.96E-31 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RR42_RS02185 eb58595b86ab731f8efe3eaf5906f976 575 SUPERFAMILY SSF56425 233 354 4.64E-32 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RR42_RS02185 eb58595b86ab731f8efe3eaf5906f976 575 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 2.6E-5 T 23-04-2016 RR42_RS02185 eb58595b86ab731f8efe3eaf5906f976 575 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 378 2.6E-5 T 23-04-2016 RR42_RS02185 eb58595b86ab731f8efe3eaf5906f976 575 PANTHER PTHR11632 3 536 2.4E-145 T 23-04-2016 RR42_RS15345 3c25cbe6087d07c0d1da90db91f4b532 517 SUPERFAMILY SSF56801 18 513 5.23E-139 T 23-04-2016 RR42_RS15345 3c25cbe6087d07c0d1da90db91f4b532 517 Gene3D G3DSA:2.30.38.10 338 409 1.5E-20 T 23-04-2016 RR42_RS15345 3c25cbe6087d07c0d1da90db91f4b532 517 Gene3D G3DSA:3.30.300.30 410 512 2.0E-30 T 23-04-2016 RR42_RS15345 3c25cbe6087d07c0d1da90db91f4b532 517 Pfam PF13193 AMP-binding enzyme C-terminal domain 424 502 1.2E-18 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RR42_RS15345 3c25cbe6087d07c0d1da90db91f4b532 517 PANTHER PTHR24096 16 509 2.1E-142 T 23-04-2016 RR42_RS15345 3c25cbe6087d07c0d1da90db91f4b532 517 PANTHER PTHR24096:SF240 16 509 2.1E-142 T 23-04-2016 RR42_RS15345 3c25cbe6087d07c0d1da90db91f4b532 517 Pfam PF00501 AMP-binding enzyme 25 415 7.2E-88 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS15345 3c25cbe6087d07c0d1da90db91f4b532 517 ProSitePatterns PS00455 Putative AMP-binding domain signature. 172 183 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS15345 3c25cbe6087d07c0d1da90db91f4b532 517 Gene3D G3DSA:3.40.50.980 21 178 3.2E-27 T 23-04-2016 RR42_RS15345 3c25cbe6087d07c0d1da90db91f4b532 517 Gene3D G3DSA:3.40.50.980 179 330 8.3E-39 T 23-04-2016 RR42_RS05355 1d280977eef9ef2ae3bb870ef6a8a679 365 Gene3D G3DSA:3.40.190.10 263 312 8.6E-4 T 23-04-2016 RR42_RS05355 1d280977eef9ef2ae3bb870ef6a8a679 365 SUPERFAMILY SSF46785 4 137 1.56E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS05355 1d280977eef9ef2ae3bb870ef6a8a679 365 SUPERFAMILY SSF53850 195 340 3.56E-9 T 23-04-2016 RR42_RS05355 1d280977eef9ef2ae3bb870ef6a8a679 365 Pfam PF12727 PBP superfamily domain 134 316 7.2E-46 T 23-04-2016 IPR024370 PBP domain RR42_RS05355 1d280977eef9ef2ae3bb870ef6a8a679 365 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 81 1.0E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS05355 1d280977eef9ef2ae3bb870ef6a8a679 365 Gene3D G3DSA:1.10.10.10 3 120 2.0E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS05355 1d280977eef9ef2ae3bb870ef6a8a679 365 PANTHER PTHR38431 118 351 6.1E-25 T 23-04-2016 RR42_RS20690 3f8d7cebdb3d9f92744a1b33e89d5224 295 Pfam PF07608 Protein of unknown function (DUF1571) 93 295 2.6E-52 T 23-04-2016 IPR011465 Protein of unknown function DUF1571 RR42_RS03710 6dda36ae78addc2fbc93aef73fefb24e 212 SUPERFAMILY SSF81342 18 212 5.26E-38 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RR42_RS03710 6dda36ae78addc2fbc93aef73fefb24e 212 Pfam PF01292 Prokaryotic cytochrome b561 24 208 1.1E-28 T 23-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RR42_RS03710 6dda36ae78addc2fbc93aef73fefb24e 212 PANTHER PTHR30485:SF1 5 212 6.2E-52 T 23-04-2016 RR42_RS03710 6dda36ae78addc2fbc93aef73fefb24e 212 Gene3D G3DSA:1.20.950.20 22 212 6.1E-47 T 23-04-2016 RR42_RS03710 6dda36ae78addc2fbc93aef73fefb24e 212 PANTHER PTHR30485 5 212 6.2E-52 T 23-04-2016 RR42_RS03710 6dda36ae78addc2fbc93aef73fefb24e 212 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 25 48 1.2E-6 T 23-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 RR42_RS03710 6dda36ae78addc2fbc93aef73fefb24e 212 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 177 199 1.2E-6 T 23-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 RR42_RS19275 d2a14ea280c503a8aee5622bf8a1c2a5 409 Pfam PF01738 Dienelactone hydrolase family 14 227 2.8E-44 T 23-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 RR42_RS19275 d2a14ea280c503a8aee5622bf8a1c2a5 409 PANTHER PTHR32083 202 407 9.0E-73 T 23-04-2016 RR42_RS19275 d2a14ea280c503a8aee5622bf8a1c2a5 409 PANTHER PTHR32083:SF28 202 407 9.0E-73 T 23-04-2016 RR42_RS19275 d2a14ea280c503a8aee5622bf8a1c2a5 409 SUPERFAMILY SSF53474 2 227 1.85E-44 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS19275 d2a14ea280c503a8aee5622bf8a1c2a5 409 Gene3D G3DSA:3.10.450.50 248 377 2.5E-15 T 23-04-2016 IPR032710 NTF2-like domain RR42_RS19275 d2a14ea280c503a8aee5622bf8a1c2a5 409 SUPERFAMILY SSF54427 236 379 1.93E-24 T 23-04-2016 IPR032710 NTF2-like domain RR42_RS19275 d2a14ea280c503a8aee5622bf8a1c2a5 409 Gene3D G3DSA:3.40.50.1820 3 227 8.9E-51 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS11085 d4a50fb94d07149092ee6c511bb6480e 392 PANTHER PTHR18919 1 392 5.2E-217 T 23-04-2016 RR42_RS11085 d4a50fb94d07149092ee6c511bb6480e 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 23-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 RR42_RS11085 d4a50fb94d07149092ee6c511bb6480e 392 Gene3D G3DSA:3.40.47.10 143 184 2.9E-62 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS11085 d4a50fb94d07149092ee6c511bb6480e 392 Gene3D G3DSA:3.40.47.10 276 391 2.9E-62 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS11085 d4a50fb94d07149092ee6c511bb6480e 392 Gene3D G3DSA:3.40.47.10 4 125 2.6E-58 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS11085 d4a50fb94d07149092ee6c511bb6480e 392 Gene3D G3DSA:3.40.47.10 185 274 2.6E-58 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS11085 d4a50fb94d07149092ee6c511bb6480e 392 SUPERFAMILY SSF53901 1 265 4.01E-70 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS11085 d4a50fb94d07149092ee6c511bb6480e 392 SUPERFAMILY SSF53901 271 391 8.07E-42 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS11085 d4a50fb94d07149092ee6c511bb6480e 392 Pfam PF02803 Thiolase, C-terminal domain 270 390 6.0E-45 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RR42_RS11085 d4a50fb94d07149092ee6c511bb6480e 392 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 23-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RR42_RS11085 d4a50fb94d07149092ee6c511bb6480e 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 7.0E-126 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RR42_RS11085 d4a50fb94d07149092ee6c511bb6480e 392 Pfam PF00108 Thiolase, N-terminal domain 5 260 4.3E-63 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RR42_RS11085 d4a50fb94d07149092ee6c511bb6480e 392 PIRSF PIRSF000429 1 392 5.6E-118 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RR42_RS11085 d4a50fb94d07149092ee6c511bb6480e 392 PANTHER PTHR18919:SF14 1 392 5.2E-217 T 23-04-2016 RR42_RS25880 eacfd4f9e346f10251a5a4302063cba3 274 SUPERFAMILY SSF55486 1 92 3.37E-26 T 23-04-2016 RR42_RS25880 eacfd4f9e346f10251a5a4302063cba3 274 Gene3D G3DSA:1.10.390.10 3 93 1.3E-21 T 23-04-2016 RR42_RS25880 eacfd4f9e346f10251a5a4302063cba3 274 PANTHER PTHR11533 263 274 1.5E-105 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 RR42_RS25880 eacfd4f9e346f10251a5a4302063cba3 274 PANTHER PTHR11533:SF152 263 274 1.5E-105 T 23-04-2016 RR42_RS25880 eacfd4f9e346f10251a5a4302063cba3 274 PANTHER PTHR11533 1 239 1.5E-105 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 RR42_RS25880 eacfd4f9e346f10251a5a4302063cba3 274 PANTHER PTHR11533:SF152 1 239 1.5E-105 T 23-04-2016 RR42_RS25880 eacfd4f9e346f10251a5a4302063cba3 274 Pfam PF11940 Domain of unknown function (DUF3458) 101 274 1.0E-53 T 23-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal RR42_RS25880 eacfd4f9e346f10251a5a4302063cba3 274 Gene3D G3DSA:1.25.50.10 200 274 1.7E-24 T 23-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal RR42_RS12350 a303a0108f34efa0213dc1da58f7665f 113 SUPERFAMILY SSF57783 3 36 3.06E-11 T 23-04-2016 RR42_RS12350 a303a0108f34efa0213dc1da58f7665f 113 Gene3D G3DSA:2.20.25.10 1 41 2.0E-17 T 23-04-2016 RR42_RS12350 a303a0108f34efa0213dc1da58f7665f 113 SUPERFAMILY SSF82057 43 113 7.32E-25 T 23-04-2016 RR42_RS12350 a303a0108f34efa0213dc1da58f7665f 113 Pfam PF08274 PhnA Zinc-Ribbon 3 32 7.3E-12 T 23-04-2016 IPR013987 PhnA protein, N-terminal RR42_RS12350 a303a0108f34efa0213dc1da58f7665f 113 PANTHER PTHR30305 2 113 4.7E-56 T 23-04-2016 RR42_RS12350 a303a0108f34efa0213dc1da58f7665f 113 Pfam PF03831 PhnA domain 47 113 5.5E-29 T 23-04-2016 IPR013988 PhnA protein, C-terminal RR42_RS12350 a303a0108f34efa0213dc1da58f7665f 113 Gene3D G3DSA:2.30.30.40 45 113 2.7E-32 T 23-04-2016 RR42_RS12350 a303a0108f34efa0213dc1da58f7665f 113 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 113 1.9E-41 T 23-04-2016 IPR004624 PhnA protein RR42_RS02690 4837136e88ed8e49c55e87e694f582f8 241 PANTHER PTHR34300 16 238 4.3E-52 T 23-04-2016 RR42_RS02690 4837136e88ed8e49c55e87e694f582f8 241 PANTHER PTHR34300:SF2 16 238 4.3E-52 T 23-04-2016 RR42_RS02690 4837136e88ed8e49c55e87e694f582f8 241 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 23 221 4.3E-31 T 23-04-2016 IPR003744 Protein of unknown function DUF165 RR42_RS02690 4837136e88ed8e49c55e87e694f582f8 241 Pfam PF02592 Putative vitamin uptake transporter 55 214 8.3E-48 T 23-04-2016 IPR003744 Protein of unknown function DUF165 RR42_RS05245 f4da600313e3c525f8f1eba6d099401a 361 SUPERFAMILY SSF56935 26 361 5.8E-73 T 23-04-2016 RR42_RS05245 f4da600313e3c525f8f1eba6d099401a 361 Pfam PF13609 Gram-negative porin 12 343 8.1E-56 T 23-04-2016 RR42_RS05245 f4da600313e3c525f8f1eba6d099401a 361 Gene3D G3DSA:2.40.160.10 26 361 1.3E-77 T 23-04-2016 IPR023614 Porin domain RR42_RS15250 dd9c3a288864d27813212b6ff520f75a 182 PANTHER PTHR38784:SF1 1 182 1.0E-79 T 23-04-2016 RR42_RS15250 dd9c3a288864d27813212b6ff520f75a 182 SMART SM01322 1 176 5.0E-114 T 23-04-2016 IPR009822 YaeQ RR42_RS15250 dd9c3a288864d27813212b6ff520f75a 182 Pfam PF07152 YaeQ protein 1 173 1.4E-74 T 23-04-2016 IPR009822 YaeQ RR42_RS15250 dd9c3a288864d27813212b6ff520f75a 182 Gene3D G3DSA:3.10.640.10 1 179 2.1E-79 T 23-04-2016 RR42_RS15250 dd9c3a288864d27813212b6ff520f75a 182 PIRSF PIRSF011484 1 180 1.4E-70 T 23-04-2016 IPR009822 YaeQ RR42_RS15250 dd9c3a288864d27813212b6ff520f75a 182 SUPERFAMILY SSF52980 4 178 2.39E-70 T 23-04-2016 IPR011335 Restriction endonuclease type II-like RR42_RS15250 dd9c3a288864d27813212b6ff520f75a 182 PANTHER PTHR38784 1 182 1.0E-79 T 23-04-2016 RR42_RS19100 27faa6e929bf7af7e0d4e9d9d98b437a 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 272 287 6.6E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS19100 27faa6e929bf7af7e0d4e9d9d98b437a 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 155 174 6.6E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS19100 27faa6e929bf7af7e0d4e9d9d98b437a 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 302 321 6.6E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS19100 27faa6e929bf7af7e0d4e9d9d98b437a 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 124 138 6.6E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS19100 27faa6e929bf7af7e0d4e9d9d98b437a 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 193 212 6.6E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS19100 27faa6e929bf7af7e0d4e9d9d98b437a 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 247 263 6.6E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS19100 27faa6e929bf7af7e0d4e9d9d98b437a 330 SUPERFAMILY SSF51569 3 329 3.08E-144 T 23-04-2016 RR42_RS19100 27faa6e929bf7af7e0d4e9d9d98b437a 330 SMART SM01004 4 328 7.6E-243 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS19100 27faa6e929bf7af7e0d4e9d9d98b437a 330 PANTHER PTHR11458 4 330 5.5E-180 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS19100 27faa6e929bf7af7e0d4e9d9d98b437a 330 PIRSF PIRSF001415 1 330 6.5E-147 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS19100 27faa6e929bf7af7e0d4e9d9d98b437a 330 Gene3D G3DSA:3.20.20.70 3 329 3.9E-150 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS19100 27faa6e929bf7af7e0d4e9d9d98b437a 330 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 247 259 - T 23-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS19100 27faa6e929bf7af7e0d4e9d9d98b437a 330 Pfam PF00490 Delta-aminolevulinic acid dehydratase 7 326 6.0E-140 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS05315 76a3b549521d510c7be0861ff6e9443c 366 PANTHER PTHR19353:SF24 35 324 2.8E-26 T 23-04-2016 RR42_RS05315 76a3b549521d510c7be0861ff6e9443c 366 PANTHER PTHR19353 35 324 2.8E-26 T 23-04-2016 RR42_RS05315 76a3b549521d510c7be0861ff6e9443c 366 Pfam PF00487 Fatty acid desaturase 62 326 2.7E-31 T 23-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 RR42_RS06360 672825e23ff17bd3a3e942de6ef48ad6 323 PANTHER PTHR22855:SF42 1 318 6.3E-123 T 23-04-2016 RR42_RS06360 672825e23ff17bd3a3e942de6ef48ad6 323 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 6.4E-149 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RR42_RS06360 672825e23ff17bd3a3e942de6ef48ad6 323 SUPERFAMILY SSF52096 5 316 4.46E-100 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS06360 672825e23ff17bd3a3e942de6ef48ad6 323 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 49.325 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RR42_RS06360 672825e23ff17bd3a3e942de6ef48ad6 323 PANTHER PTHR22855 1 318 6.3E-123 T 23-04-2016 RR42_RS06360 672825e23ff17bd3a3e942de6ef48ad6 323 Gene3D G3DSA:3.90.226.10 57 284 1.8E-47 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS06360 672825e23ff17bd3a3e942de6ef48ad6 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 1.76E-45 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RR42_RS06360 672825e23ff17bd3a3e942de6ef48ad6 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 1.76E-45 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RR42_RS06360 672825e23ff17bd3a3e942de6ef48ad6 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 1.76E-45 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RR42_RS06360 672825e23ff17bd3a3e942de6ef48ad6 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 1.76E-45 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RR42_RS06360 672825e23ff17bd3a3e942de6ef48ad6 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 1.76E-45 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RR42_RS06360 672825e23ff17bd3a3e942de6ef48ad6 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 1.76E-45 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RR42_RS06360 672825e23ff17bd3a3e942de6ef48ad6 323 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 2.4E-66 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RR42_RS09405 f15fa1b06165c32d74c2350ef9a58bb1 357 SUPERFAMILY SSF51735 148 315 1.6E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS09405 f15fa1b06165c32d74c2350ef9a58bb1 357 SUPERFAMILY SSF50129 1 180 2.28E-50 T 23-04-2016 IPR011032 GroES-like RR42_RS09405 f15fa1b06165c32d74c2350ef9a58bb1 357 Gene3D G3DSA:3.90.180.10 1 175 1.0E-54 T 23-04-2016 IPR011032 GroES-like RR42_RS09405 f15fa1b06165c32d74c2350ef9a58bb1 357 Pfam PF00107 Zinc-binding dehydrogenase 184 310 3.8E-31 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RR42_RS09405 f15fa1b06165c32d74c2350ef9a58bb1 357 SMART SM00829 8 349 5.2E-5 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RR42_RS09405 f15fa1b06165c32d74c2350ef9a58bb1 357 PANTHER PTHR11695:SF38 12 351 2.7E-125 T 23-04-2016 RR42_RS09405 f15fa1b06165c32d74c2350ef9a58bb1 357 Gene3D G3DSA:3.40.50.720 176 295 1.0E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS09405 f15fa1b06165c32d74c2350ef9a58bb1 357 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 70 84 - T 23-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 RR42_RS09405 f15fa1b06165c32d74c2350ef9a58bb1 357 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 143 9.4E-33 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RR42_RS09405 f15fa1b06165c32d74c2350ef9a58bb1 357 PANTHER PTHR11695 12 351 2.7E-125 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RR42_RS14020 d860f19f7f3bbede9cfa7a63ce421d87 147 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 129 24.524 T 23-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RR42_RS14020 d860f19f7f3bbede9cfa7a63ce421d87 147 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 127 3.0E-21 T 23-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RR42_RS14020 d860f19f7f3bbede9cfa7a63ce421d87 147 Gene3D G3DSA:3.90.470.20 2 128 8.7E-33 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RR42_RS14020 d860f19f7f3bbede9cfa7a63ce421d87 147 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 106 4.0E-45 T 23-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RR42_RS14020 d860f19f7f3bbede9cfa7a63ce421d87 147 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 128 9.3E-25 T 23-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RR42_RS14020 d860f19f7f3bbede9cfa7a63ce421d87 147 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 103 1.5E-17 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RR42_RS14020 d860f19f7f3bbede9cfa7a63ce421d87 147 SUPERFAMILY SSF56214 2 128 7.19E-28 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RR42_RS02900 375ef8e2f60140fc08eee2b025fbe27f 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 7.2E-20 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS02900 375ef8e2f60140fc08eee2b025fbe27f 313 Gene3D G3DSA:1.10.10.10 5 83 1.9E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS02900 375ef8e2f60140fc08eee2b025fbe27f 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 4.7E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS02900 375ef8e2f60140fc08eee2b025fbe27f 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 4.7E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS02900 375ef8e2f60140fc08eee2b025fbe27f 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 4.7E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS02900 375ef8e2f60140fc08eee2b025fbe27f 313 Gene3D G3DSA:3.40.190.10 184 261 4.2E-5 T 23-04-2016 RR42_RS02900 375ef8e2f60140fc08eee2b025fbe27f 313 Pfam PF03466 LysR substrate binding domain 92 294 2.4E-33 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS02900 375ef8e2f60140fc08eee2b025fbe27f 313 PANTHER PTHR30537:SF26 1 312 7.7E-90 T 23-04-2016 RR42_RS02900 375ef8e2f60140fc08eee2b025fbe27f 313 SUPERFAMILY SSF53850 94 298 7.06E-35 T 23-04-2016 RR42_RS02900 375ef8e2f60140fc08eee2b025fbe27f 313 Gene3D G3DSA:3.40.190.10 98 183 2.1E-27 T 23-04-2016 RR42_RS02900 375ef8e2f60140fc08eee2b025fbe27f 313 PANTHER PTHR30537 1 312 7.7E-90 T 23-04-2016 RR42_RS02900 375ef8e2f60140fc08eee2b025fbe27f 313 SUPERFAMILY SSF46785 6 82 8.6E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 SUPERFAMILY SSF52374 436 688 2.82E-146 T 23-04-2016 RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 SUPERFAMILY SSF52374 7 231 2.82E-146 T 23-04-2016 RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 SUPERFAMILY SSF47323 683 877 1.16E-30 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 PRINTS PR00985 Leucyl-tRNA synthetase signature 220 239 2.4E-49 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 PRINTS PR00985 Leucyl-tRNA synthetase signature 159 175 2.4E-49 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 PRINTS PR00985 Leucyl-tRNA synthetase signature 133 150 2.4E-49 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 PRINTS PR00985 Leucyl-tRNA synthetase signature 507 525 2.4E-49 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 PRINTS PR00985 Leucyl-tRNA synthetase signature 191 204 2.4E-49 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 PRINTS PR00985 Leucyl-tRNA synthetase signature 577 587 2.4E-49 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 PRINTS PR00985 Leucyl-tRNA synthetase signature 544 566 2.4E-49 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 8 878 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 Gene3D G3DSA:3.90.740.10 243 443 3.2E-41 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 SUPERFAMILY SSF50677 234 434 6.59E-49 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 PANTHER PTHR11946:SF7 639 878 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 PANTHER PTHR11946:SF7 1 212 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 PANTHER PTHR11946:SF7 253 594 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 Pfam PF09334 tRNA synthetases class I (M) 44 177 4.1E-19 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 Pfam PF08264 Anticodon-binding domain of tRNA 719 837 3.8E-13 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 Gene3D G3DSA:1.10.730.10 669 814 4.3E-38 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 PANTHER PTHR11946 639 878 0.0 T 23-04-2016 RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 PANTHER PTHR11946 1 212 0.0 T 23-04-2016 RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 PANTHER PTHR11946 253 594 0.0 T 23-04-2016 RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 48 59 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 Gene3D G3DSA:3.40.50.620 4 231 7.6E-149 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 Gene3D G3DSA:3.40.50.620 639 668 7.6E-149 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 Gene3D G3DSA:3.40.50.620 444 593 7.6E-149 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 878 22.737 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 226 422 9.4E-65 T 23-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 639 679 4.1E-7 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS17545 81c254e7b99f25e80255bf14df6d6505 878 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 438 592 4.0E-8 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS19835 8cc85087a49cb3292e42f0d7e184f20e 437 Gene3D G3DSA:1.20.1250.20 254 431 7.5E-17 T 23-04-2016 RR42_RS19835 8cc85087a49cb3292e42f0d7e184f20e 437 Gene3D G3DSA:1.20.1250.20 30 232 6.6E-23 T 23-04-2016 RR42_RS19835 8cc85087a49cb3292e42f0d7e184f20e 437 PANTHER PTHR23508 29 434 1.7E-109 T 23-04-2016 RR42_RS19835 8cc85087a49cb3292e42f0d7e184f20e 437 Pfam PF07690 Major Facilitator Superfamily 36 387 2.1E-22 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS19835 8cc85087a49cb3292e42f0d7e184f20e 437 PANTHER PTHR23508:SF13 29 434 1.7E-109 T 23-04-2016 RR42_RS19835 8cc85087a49cb3292e42f0d7e184f20e 437 SUPERFAMILY SSF103473 28 431 2.88E-59 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS18930 98117f6fec5ece10df7db65b9df744d4 85 PANTHER PTHR12735 1 80 1.3E-18 T 23-04-2016 RR42_RS18930 98117f6fec5ece10df7db65b9df744d4 85 Gene3D G3DSA:3.30.300.90 2 80 1.0E-29 T 23-04-2016 IPR002634 BolA protein RR42_RS18930 98117f6fec5ece10df7db65b9df744d4 85 SUPERFAMILY SSF82657 2 79 2.62E-28 T 23-04-2016 IPR002634 BolA protein RR42_RS18930 98117f6fec5ece10df7db65b9df744d4 85 PIRSF PIRSF003113 1 85 2.1E-23 T 23-04-2016 IPR002634 BolA protein RR42_RS18930 98117f6fec5ece10df7db65b9df744d4 85 Pfam PF01722 BolA-like protein 18 75 1.3E-19 T 23-04-2016 IPR002634 BolA protein RR42_RS06615 5ef734708f368a42cf62064cebc50984 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.2E-38 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RR42_RS06615 5ef734708f368a42cf62064cebc50984 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.2E-38 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RR42_RS06615 5ef734708f368a42cf62064cebc50984 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.2E-38 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RR42_RS06615 5ef734708f368a42cf62064cebc50984 118 SUPERFAMILY SSF74731 2 115 1.44E-49 T 23-04-2016 RR42_RS06615 5ef734708f368a42cf62064cebc50984 118 PANTHER PTHR10986 2 115 3.5E-62 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RR42_RS06615 5ef734708f368a42cf62064cebc50984 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 8.6E-50 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RR42_RS06615 5ef734708f368a42cf62064cebc50984 118 Gene3D G3DSA:1.10.1900.20 55 117 3.1E-30 T 23-04-2016 RR42_RS06615 5ef734708f368a42cf62064cebc50984 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RR42_RS06615 5ef734708f368a42cf62064cebc50984 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.885 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RR42_RS06615 5ef734708f368a42cf62064cebc50984 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 3.0E-22 T 23-04-2016 RR42_RS06615 5ef734708f368a42cf62064cebc50984 118 Pfam PF00453 Ribosomal protein L20 3 109 3.3E-49 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RR42_RS35680 a4324330a1f4ff2d868ba1503c1569ad 637 Pfam PF01568 Molydopterin dinucleotide binding domain 509 635 9.5E-18 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RR42_RS35680 a4324330a1f4ff2d868ba1503c1569ad 637 SUPERFAMILY SSF53706 2 284 4.58E-77 T 23-04-2016 RR42_RS35680 a4324330a1f4ff2d868ba1503c1569ad 637 PANTHER PTHR11615 1 47 2.1E-140 T 23-04-2016 RR42_RS35680 a4324330a1f4ff2d868ba1503c1569ad 637 PANTHER PTHR11615 66 169 2.1E-140 T 23-04-2016 RR42_RS35680 a4324330a1f4ff2d868ba1503c1569ad 637 PANTHER PTHR11615 185 277 2.1E-140 T 23-04-2016 RR42_RS35680 a4324330a1f4ff2d868ba1503c1569ad 637 PANTHER PTHR11615 417 637 2.1E-140 T 23-04-2016 RR42_RS35680 a4324330a1f4ff2d868ba1503c1569ad 637 PANTHER PTHR11615:SF140 66 169 2.1E-140 T 23-04-2016 RR42_RS35680 a4324330a1f4ff2d868ba1503c1569ad 637 PANTHER PTHR11615:SF140 185 277 2.1E-140 T 23-04-2016 RR42_RS35680 a4324330a1f4ff2d868ba1503c1569ad 637 PANTHER PTHR11615:SF140 417 637 2.1E-140 T 23-04-2016 RR42_RS35680 a4324330a1f4ff2d868ba1503c1569ad 637 PANTHER PTHR11615:SF140 1 47 2.1E-140 T 23-04-2016 RR42_RS35680 a4324330a1f4ff2d868ba1503c1569ad 637 Gene3D G3DSA:2.40.40.20 326 359 2.1E-49 T 23-04-2016 RR42_RS35680 a4324330a1f4ff2d868ba1503c1569ad 637 Gene3D G3DSA:2.40.40.20 455 466 2.1E-49 T 23-04-2016 RR42_RS35680 a4324330a1f4ff2d868ba1503c1569ad 637 Gene3D G3DSA:2.40.40.20 503 637 2.1E-49 T 23-04-2016 RR42_RS35680 a4324330a1f4ff2d868ba1503c1569ad 637 Pfam PF00384 Molybdopterin oxidoreductase 1 238 2.5E-15 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RR42_RS35680 a4324330a1f4ff2d868ba1503c1569ad 637 SUPERFAMILY SSF50692 473 637 1.49E-36 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain RR42_RS35680 a4324330a1f4ff2d868ba1503c1569ad 637 Gene3D G3DSA:3.40.50.740 111 249 6.5E-31 T 23-04-2016 RR42_RS35680 a4324330a1f4ff2d868ba1503c1569ad 637 Gene3D G3DSA:3.40.228.10 1 110 3.6E-22 T 23-04-2016 RR42_RS09910 fa909636c3deb88b0ca3b3016c60bd77 267 Gene3D G3DSA:3.50.30.50 3 262 1.9E-61 T 23-04-2016 RR42_RS09910 fa909636c3deb88b0ca3b3016c60bd77 267 PANTHER PTHR31118 1 33 8.2E-37 T 23-04-2016 RR42_RS09910 fa909636c3deb88b0ca3b3016c60bd77 267 PANTHER PTHR31118 53 267 8.2E-37 T 23-04-2016 RR42_RS09910 fa909636c3deb88b0ca3b3016c60bd77 267 SUPERFAMILY SSF102198 3 260 2.62E-57 T 23-04-2016 RR42_RS09910 fa909636c3deb88b0ca3b3016c60bd77 267 Pfam PF04199 Putative cyclase 6 190 1.3E-35 T 23-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 RR42_RS17715 dbb3c034c7d4c70cb4185526998b24a8 166 Pfam PF08534 Redoxin 19 162 1.9E-26 T 23-04-2016 IPR013740 Redoxin GO:0016491 RR42_RS17715 dbb3c034c7d4c70cb4185526998b24a8 166 Gene3D G3DSA:3.40.30.10 3 166 2.3E-45 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS17715 dbb3c034c7d4c70cb4185526998b24a8 166 PANTHER PTHR10681 3 166 1.6E-45 T 23-04-2016 RR42_RS17715 dbb3c034c7d4c70cb4185526998b24a8 166 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 23-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 RR42_RS17715 dbb3c034c7d4c70cb4185526998b24a8 166 PANTHER PTHR10681:SF81 3 166 1.6E-45 T 23-04-2016 RR42_RS17715 dbb3c034c7d4c70cb4185526998b24a8 166 SUPERFAMILY SSF52833 1 163 7.33E-43 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS17715 dbb3c034c7d4c70cb4185526998b24a8 166 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 166 38.45 T 23-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 RR42_RS00035 c4aa473fc16202626158f9ff3e92289f 195 PANTHER PTHR10169 1 53 2.0E-23 T 23-04-2016 RR42_RS00035 c4aa473fc16202626158f9ff3e92289f 195 SUPERFAMILY SSF56719 1 60 1.7E-17 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RR42_RS00035 c4aa473fc16202626158f9ff3e92289f 195 PRINTS PR00418 DNA topoisomerase II family signature 5 22 2.6E-12 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00035 c4aa473fc16202626158f9ff3e92289f 195 PRINTS PR00418 DNA topoisomerase II family signature 25 37 2.6E-12 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS00035 c4aa473fc16202626158f9ff3e92289f 195 Gene3D G3DSA:3.40.50.670 1 58 1.8E-21 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS22440 cde86410456eaacd090fd2173e8a5ca9 254 ProSitePatterns PS00455 Putative AMP-binding domain signature. 78 89 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS22440 cde86410456eaacd090fd2173e8a5ca9 254 Gene3D G3DSA:3.40.50.980 72 184 1.9E-19 T 23-04-2016 RR42_RS22440 cde86410456eaacd090fd2173e8a5ca9 254 Pfam PF00501 AMP-binding enzyme 52 228 1.3E-26 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS22440 cde86410456eaacd090fd2173e8a5ca9 254 PANTHER PTHR24096 1 254 2.7E-70 T 23-04-2016 RR42_RS22440 cde86410456eaacd090fd2173e8a5ca9 254 PANTHER PTHR24096:SF151 1 254 2.7E-70 T 23-04-2016 RR42_RS22440 cde86410456eaacd090fd2173e8a5ca9 254 SUPERFAMILY SSF56801 10 185 8.9E-31 T 23-04-2016 RR42_RS22440 cde86410456eaacd090fd2173e8a5ca9 254 SUPERFAMILY SSF56801 239 254 8.9E-31 T 23-04-2016 RR42_RS22440 cde86410456eaacd090fd2173e8a5ca9 254 PRINTS PR00154 AMP-binding signature 85 93 6.3E-5 T 23-04-2016 IPR020459 AMP-binding RR42_RS22440 cde86410456eaacd090fd2173e8a5ca9 254 PRINTS PR00154 AMP-binding signature 73 84 6.3E-5 T 23-04-2016 IPR020459 AMP-binding RR42_RS26790 544082ad8c1bf3a0ad6f4281c5e4227d 402 Gene3D G3DSA:3.40.50.980 148 302 5.1E-28 T 23-04-2016 RR42_RS26790 544082ad8c1bf3a0ad6f4281c5e4227d 402 Gene3D G3DSA:3.40.50.980 5 147 3.5E-34 T 23-04-2016 RR42_RS26790 544082ad8c1bf3a0ad6f4281c5e4227d 402 ProSitePatterns PS00455 Putative AMP-binding domain signature. 142 153 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS26790 544082ad8c1bf3a0ad6f4281c5e4227d 402 PANTHER PTHR24095 5 402 2.9E-96 T 23-04-2016 RR42_RS26790 544082ad8c1bf3a0ad6f4281c5e4227d 402 PANTHER PTHR24095:SF117 5 402 2.9E-96 T 23-04-2016 RR42_RS26790 544082ad8c1bf3a0ad6f4281c5e4227d 402 Gene3D G3DSA:2.30.38.10 315 400 1.1E-20 T 23-04-2016 RR42_RS26790 544082ad8c1bf3a0ad6f4281c5e4227d 402 Pfam PF00501 AMP-binding enzyme 4 402 7.8E-77 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS26790 544082ad8c1bf3a0ad6f4281c5e4227d 402 SUPERFAMILY SSF56801 4 402 1.44E-96 T 23-04-2016 RR42_RS11320 934cb1f0e27434932203c6e45c93453e 237 Pfam PF03475 3-alpha domain 182 224 7.2E-13 T 23-04-2016 IPR005163 3-alpha domain RR42_RS11320 934cb1f0e27434932203c6e45c93453e 237 PANTHER PTHR30212 26 236 1.1E-77 T 23-04-2016 RR42_RS11320 934cb1f0e27434932203c6e45c93453e 237 Gene3D G3DSA:2.40.33.20 8 236 7.9E-91 T 23-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like RR42_RS11320 934cb1f0e27434932203c6e45c93453e 237 PANTHER PTHR30212:SF2 26 236 1.1E-77 T 23-04-2016 RR42_RS11320 934cb1f0e27434932203c6e45c93453e 237 SUPERFAMILY SSF50800 10 236 2.2E-77 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain RR42_RS11320 934cb1f0e27434932203c6e45c93453e 237 Pfam PF03473 MOSC domain 53 172 1.7E-27 T 23-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 RR42_RS16210 3702d8e769e8507fbef404faa7679321 557 Pfam PF00920 Dehydratase family 35 554 3.4E-204 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RR42_RS16210 3702d8e769e8507fbef404faa7679321 557 PANTHER PTHR21000 4 557 0.0 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RR42_RS16210 3702d8e769e8507fbef404faa7679321 557 SUPERFAMILY SSF52016 380 557 7.85E-57 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RR42_RS16210 3702d8e769e8507fbef404faa7679321 557 SUPERFAMILY SSF143975 3 378 4.97E-133 T 23-04-2016 RR42_RS16210 3702d8e769e8507fbef404faa7679321 557 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 465 476 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RR42_RS16210 3702d8e769e8507fbef404faa7679321 557 PANTHER PTHR21000:SF5 4 557 0.0 T 23-04-2016 RR42_RS16210 3702d8e769e8507fbef404faa7679321 557 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 123 133 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RR42_RS16210 3702d8e769e8507fbef404faa7679321 557 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 5 557 43.664 T 23-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RR42_RS16210 3702d8e769e8507fbef404faa7679321 557 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 557 8.8E-226 T 23-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RR42_RS07735 397ea0d677ec238f6a3b0cadaba37ae7 451 SUPERFAMILY SSF55874 300 428 1.05E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS07735 397ea0d677ec238f6a3b0cadaba37ae7 451 PANTHER PTHR24423 169 425 1.6E-42 T 23-04-2016 RR42_RS07735 397ea0d677ec238f6a3b0cadaba37ae7 451 PANTHER PTHR24423 1 11 1.6E-42 T 23-04-2016 RR42_RS07735 397ea0d677ec238f6a3b0cadaba37ae7 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 426 1.4E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS07735 397ea0d677ec238f6a3b0cadaba37ae7 451 SMART SM00388 228 293 3.9E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS07735 397ea0d677ec238f6a3b0cadaba37ae7 451 Gene3D G3DSA:1.10.287.130 220 289 4.2E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS07735 397ea0d677ec238f6a3b0cadaba37ae7 451 SMART SM00387 336 444 1.1E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS07735 397ea0d677ec238f6a3b0cadaba37ae7 451 Pfam PF00512 His Kinase A (phospho-acceptor) domain 230 293 2.3E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS07735 397ea0d677ec238f6a3b0cadaba37ae7 451 SUPERFAMILY SSF47384 211 294 1.26E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS07735 397ea0d677ec238f6a3b0cadaba37ae7 451 Gene3D G3DSA:3.30.565.10 299 427 1.2E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS07735 397ea0d677ec238f6a3b0cadaba37ae7 451 Pfam PF00672 HAMP domain 157 223 1.2E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS01030 646b6b02c680820ef5d08fe5063b125c 139 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 17 138 27.646 T 23-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 RR42_RS01030 646b6b02c680820ef5d08fe5063b125c 139 SUPERFAMILY SSF109635 5 98 7.98E-30 T 23-04-2016 RR42_RS01030 646b6b02c680820ef5d08fe5063b125c 139 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 102 126 - T 23-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site RR42_RS01030 646b6b02c680820ef5d08fe5063b125c 139 SUPERFAMILY SSF57716 99 137 3.28E-8 T 23-04-2016 RR42_RS01030 646b6b02c680820ef5d08fe5063b125c 139 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 21 128 1.8E-43 T 23-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 RR42_RS01030 646b6b02c680820ef5d08fe5063b125c 139 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 97 131 1.0E-10 T 23-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 RR42_RS01030 646b6b02c680820ef5d08fe5063b125c 139 PANTHER PTHR33823:SF2 17 135 1.6E-37 T 23-04-2016 RR42_RS01030 646b6b02c680820ef5d08fe5063b125c 139 PANTHER PTHR33823 17 135 1.6E-37 T 23-04-2016 RR42_RS14555 0f1d06083b8643168ffc52fcf9b9e05e 637 PANTHER PTHR11528:SF44 6 636 0.0 T 23-04-2016 RR42_RS14555 0f1d06083b8643168ffc52fcf9b9e05e 637 Pfam PF00183 Hsp90 protein 222 636 2.8E-127 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RR42_RS14555 0f1d06083b8643168ffc52fcf9b9e05e 637 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 183 1.2E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS14555 0f1d06083b8643168ffc52fcf9b9e05e 637 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 26 35 - T 23-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 RR42_RS14555 0f1d06083b8643168ffc52fcf9b9e05e 637 Gene3D G3DSA:3.30.565.10 6 242 2.6E-83 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS14555 0f1d06083b8643168ffc52fcf9b9e05e 637 SMART SM00387 28 185 9.2E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS14555 0f1d06083b8643168ffc52fcf9b9e05e 637 PIRSF PIRSF002583 1 637 6.7E-213 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RR42_RS14555 0f1d06083b8643168ffc52fcf9b9e05e 637 SUPERFAMILY SSF55874 5 216 2.1E-66 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS14555 0f1d06083b8643168ffc52fcf9b9e05e 637 PANTHER PTHR11528 6 636 0.0 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RR42_RS14555 0f1d06083b8643168ffc52fcf9b9e05e 637 SUPERFAMILY SSF110942 521 636 2.09E-33 T 23-04-2016 RR42_RS14555 0f1d06083b8643168ffc52fcf9b9e05e 637 SUPERFAMILY SSF54211 235 494 3.19E-95 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RR42_RS14555 0f1d06083b8643168ffc52fcf9b9e05e 637 PRINTS PR00775 90kDa heat shock protein signature 191 209 8.3E-62 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RR42_RS14555 0f1d06083b8643168ffc52fcf9b9e05e 637 PRINTS PR00775 90kDa heat shock protein signature 6 26 8.3E-62 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RR42_RS14555 0f1d06083b8643168ffc52fcf9b9e05e 637 PRINTS PR00775 90kDa heat shock protein signature 27 49 8.3E-62 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RR42_RS14555 0f1d06083b8643168ffc52fcf9b9e05e 637 PRINTS PR00775 90kDa heat shock protein signature 173 190 8.3E-62 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RR42_RS14555 0f1d06083b8643168ffc52fcf9b9e05e 637 PRINTS PR00775 90kDa heat shock protein signature 76 93 8.3E-62 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RR42_RS14555 0f1d06083b8643168ffc52fcf9b9e05e 637 PRINTS PR00775 90kDa heat shock protein signature 121 143 8.3E-62 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RR42_RS14555 0f1d06083b8643168ffc52fcf9b9e05e 637 PRINTS PR00775 90kDa heat shock protein signature 94 111 8.3E-62 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RR42_RS14555 0f1d06083b8643168ffc52fcf9b9e05e 637 Hamap MF_00505 Chaperone protein HtpG [htpG]. 3 637 32.323 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RR42_RS18600 6bae88ed3d740f134aa8a2020420b69d 299 PANTHER PTHR30193 8 299 1.0E-103 T 23-04-2016 RR42_RS18600 6bae88ed3d740f134aa8a2020420b69d 299 Gene3D G3DSA:1.10.3720.10 62 287 5.9E-56 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS18600 6bae88ed3d740f134aa8a2020420b69d 299 Gene3D G3DSA:1.20.58.370 6 42 2.3E-4 T 23-04-2016 RR42_RS18600 6bae88ed3d740f134aa8a2020420b69d 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 283 1.7E-14 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS18600 6bae88ed3d740f134aa8a2020420b69d 299 PANTHER PTHR30193:SF2 8 299 1.0E-103 T 23-04-2016 RR42_RS18600 6bae88ed3d740f134aa8a2020420b69d 299 SUPERFAMILY SSF161098 54 282 1.83E-55 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS03355 5722b94efdc79ec6ac2b8b334d65f4f5 419 Gene3D G3DSA:3.30.420.40 232 375 7.9E-21 T 23-04-2016 RR42_RS03355 5722b94efdc79ec6ac2b8b334d65f4f5 419 PANTHER PTHR18964 65 393 1.8E-25 T 23-04-2016 RR42_RS03355 5722b94efdc79ec6ac2b8b334d65f4f5 419 SUPERFAMILY SSF53067 90 394 2.53E-36 T 23-04-2016 RR42_RS03355 5722b94efdc79ec6ac2b8b334d65f4f5 419 Gene3D G3DSA:3.30.420.40 85 231 1.9E-32 T 23-04-2016 RR42_RS03355 5722b94efdc79ec6ac2b8b334d65f4f5 419 Gene3D G3DSA:1.10.10.10 15 84 1.5E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS03355 5722b94efdc79ec6ac2b8b334d65f4f5 419 Pfam PF00480 ROK family 90 391 2.9E-20 T 23-04-2016 IPR000600 ROK family RR42_RS03355 5722b94efdc79ec6ac2b8b334d65f4f5 419 SUPERFAMILY SSF46785 15 79 8.4E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS03355 5722b94efdc79ec6ac2b8b334d65f4f5 419 PANTHER PTHR18964:SF108 65 393 1.8E-25 T 23-04-2016 RR42_RS03400 56a5889b6a3e013a23f15077dbc2f405 297 Pfam PF03547 Membrane transport protein 150 293 1.6E-6 T 23-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 RR42_RS03400 56a5889b6a3e013a23f15077dbc2f405 297 PANTHER PTHR31752:SF13 118 295 1.6E-34 T 23-04-2016 RR42_RS03400 56a5889b6a3e013a23f15077dbc2f405 297 PANTHER PTHR31752:SF13 63 75 1.6E-34 T 23-04-2016 RR42_RS03400 56a5889b6a3e013a23f15077dbc2f405 297 PANTHER PTHR31752 118 295 1.6E-34 T 23-04-2016 RR42_RS03400 56a5889b6a3e013a23f15077dbc2f405 297 PANTHER PTHR31752 63 75 1.6E-34 T 23-04-2016 RR42_RS11395 3b3aa6e8f937d8fd598f73af51d25f57 301 Gene3D G3DSA:3.40.190.10 178 257 9.3E-20 T 23-04-2016 RR42_RS11395 3b3aa6e8f937d8fd598f73af51d25f57 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.7E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS11395 3b3aa6e8f937d8fd598f73af51d25f57 301 Gene3D G3DSA:1.10.10.10 2 84 3.2E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS11395 3b3aa6e8f937d8fd598f73af51d25f57 301 PANTHER PTHR30537:SF20 1 294 5.6E-155 T 23-04-2016 RR42_RS11395 3b3aa6e8f937d8fd598f73af51d25f57 301 PANTHER PTHR30537 1 294 5.6E-155 T 23-04-2016 RR42_RS11395 3b3aa6e8f937d8fd598f73af51d25f57 301 Pfam PF03466 LysR substrate binding domain 89 292 3.5E-42 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS11395 3b3aa6e8f937d8fd598f73af51d25f57 301 Gene3D G3DSA:3.40.190.10 93 177 4.0E-27 T 23-04-2016 RR42_RS11395 3b3aa6e8f937d8fd598f73af51d25f57 301 SUPERFAMILY SSF53850 91 297 6.05E-43 T 23-04-2016 RR42_RS11395 3b3aa6e8f937d8fd598f73af51d25f57 301 SUPERFAMILY SSF46785 3 113 1.4E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS15465 f1326d06b42194385ca2fca35f16dcc6 384 Pfam PF13103 TonB C terminal 299 380 8.6E-22 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 RR42_RS15465 f1326d06b42194385ca2fca35f16dcc6 384 Gene3D G3DSA:3.30.1150.10 279 384 5.7E-29 T 23-04-2016 RR42_RS15465 f1326d06b42194385ca2fca35f16dcc6 384 TIGRFAM TIGR02794 tolA_full: protein TolA 18 382 4.4E-56 T 23-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 RR42_RS15465 f1326d06b42194385ca2fca35f16dcc6 384 SUPERFAMILY SSF74653 294 383 4.71E-18 T 23-04-2016 RR42_RS15465 f1326d06b42194385ca2fca35f16dcc6 384 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 324 382 1.2E-10 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 RR42_RS04460 378c4da1596de1d2025a9854d694f256 379 PANTHER PTHR21022 27 379 6.3E-126 T 23-04-2016 RR42_RS04460 378c4da1596de1d2025a9854d694f256 379 PIRSF PIRSF001500 21 379 3.2E-144 T 23-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 RR42_RS04460 378c4da1596de1d2025a9854d694f256 379 Pfam PF01817 Chorismate mutase type II 32 109 1.4E-23 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RR42_RS04460 378c4da1596de1d2025a9854d694f256 379 SMART SM00830 32 111 4.8E-32 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RR42_RS04460 378c4da1596de1d2025a9854d694f256 379 Pfam PF01842 ACT domain 301 363 3.4E-7 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RR42_RS04460 378c4da1596de1d2025a9854d694f256 379 Pfam PF00800 Prephenate dehydratase 113 288 1.6E-63 T 23-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 RR42_RS04460 378c4da1596de1d2025a9854d694f256 379 PANTHER PTHR21022:SF0 27 379 6.3E-126 T 23-04-2016 RR42_RS04460 378c4da1596de1d2025a9854d694f256 379 SUPERFAMILY SSF55021 282 377 1.33E-26 T 23-04-2016 RR42_RS04460 378c4da1596de1d2025a9854d694f256 379 Gene3D G3DSA:3.40.190.10 197 275 1.9E-25 T 23-04-2016 RR42_RS04460 378c4da1596de1d2025a9854d694f256 379 Gene3D G3DSA:3.30.70.260 292 377 3.2E-29 T 23-04-2016 RR42_RS04460 378c4da1596de1d2025a9854d694f256 379 Gene3D G3DSA:1.20.59.10 26 109 7.1E-24 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RR42_RS04460 378c4da1596de1d2025a9854d694f256 379 SUPERFAMILY SSF48600 27 113 1.39E-21 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RR42_RS04460 378c4da1596de1d2025a9854d694f256 379 SUPERFAMILY SSF53850 112 295 1.41E-58 T 23-04-2016 RR42_RS04460 378c4da1596de1d2025a9854d694f256 379 TIGRFAM TIGR01807 CM_P2: chorismate mutase 28 101 4.2E-27 T 23-04-2016 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 RR42_RS04460 378c4da1596de1d2025a9854d694f256 379 Gene3D G3DSA:3.40.190.10 110 196 1.1E-33 T 23-04-2016 RR42_RS11040 5f207ff346e895de05028a2c34eb82ce 311 Gene3D G3DSA:3.40.30.10 3 91 7.8E-12 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS11040 5f207ff346e895de05028a2c34eb82ce 311 SUPERFAMILY SSF52833 3 101 5.61E-15 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS11040 5f207ff346e895de05028a2c34eb82ce 311 Pfam PF13410 Glutathione S-transferase, C-terminal domain 152 215 2.2E-7 T 23-04-2016 RR42_RS11040 5f207ff346e895de05028a2c34eb82ce 311 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 78 1.0E-11 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RR42_RS11040 5f207ff346e895de05028a2c34eb82ce 311 Gene3D G3DSA:1.20.1050.10 92 219 1.4E-13 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS11040 5f207ff346e895de05028a2c34eb82ce 311 PANTHER PTHR11260:SF192 1 131 2.0E-31 T 23-04-2016 RR42_RS11040 5f207ff346e895de05028a2c34eb82ce 311 PANTHER PTHR11260:SF192 157 216 2.0E-31 T 23-04-2016 RR42_RS11040 5f207ff346e895de05028a2c34eb82ce 311 SUPERFAMILY SSF47616 96 218 1.71E-11 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS11040 5f207ff346e895de05028a2c34eb82ce 311 PANTHER PTHR11260 1 131 2.0E-31 T 23-04-2016 RR42_RS11040 5f207ff346e895de05028a2c34eb82ce 311 PANTHER PTHR11260 157 216 2.0E-31 T 23-04-2016 RR42_RS12255 538d6bc08b1a40f3f78c9d8c77e4f29d 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 287 3.0E-16 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS12255 538d6bc08b1a40f3f78c9d8c77e4f29d 313 Gene3D G3DSA:1.10.3720.10 34 292 7.3E-53 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS12255 538d6bc08b1a40f3f78c9d8c77e4f29d 313 PANTHER PTHR30406:SF1 20 295 1.1E-166 T 23-04-2016 RR42_RS12255 538d6bc08b1a40f3f78c9d8c77e4f29d 313 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 30 287 4.8E-100 T 23-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 RR42_RS12255 538d6bc08b1a40f3f78c9d8c77e4f29d 313 SUPERFAMILY SSF161098 29 279 3.27E-55 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS12255 538d6bc08b1a40f3f78c9d8c77e4f29d 313 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 30 288 1.3E-128 T 23-04-2016 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 RR42_RS12255 538d6bc08b1a40f3f78c9d8c77e4f29d 313 PANTHER PTHR30406 20 295 1.1E-166 T 23-04-2016 RR42_RS14895 0d78a715db1da2a95c40ed31eb8c0635 473 SMART SM00228 270 352 2.0E-8 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS14895 0d78a715db1da2a95c40ed31eb8c0635 473 SMART SM00228 378 454 4.4E-8 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS14895 0d78a715db1da2a95c40ed31eb8c0635 473 PRINTS PR00834 HtrA/DegQ protease family signature 202 219 1.3E-45 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS14895 0d78a715db1da2a95c40ed31eb8c0635 473 PRINTS PR00834 HtrA/DegQ protease family signature 107 119 1.3E-45 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS14895 0d78a715db1da2a95c40ed31eb8c0635 473 PRINTS PR00834 HtrA/DegQ protease family signature 224 241 1.3E-45 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS14895 0d78a715db1da2a95c40ed31eb8c0635 473 PRINTS PR00834 HtrA/DegQ protease family signature 310 322 1.3E-45 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS14895 0d78a715db1da2a95c40ed31eb8c0635 473 PRINTS PR00834 HtrA/DegQ protease family signature 128 148 1.3E-45 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS14895 0d78a715db1da2a95c40ed31eb8c0635 473 PRINTS PR00834 HtrA/DegQ protease family signature 168 192 1.3E-45 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS14895 0d78a715db1da2a95c40ed31eb8c0635 473 Gene3D G3DSA:2.40.10.10 52 161 1.9E-30 T 23-04-2016 RR42_RS14895 0d78a715db1da2a95c40ed31eb8c0635 473 Gene3D G3DSA:2.30.42.10 272 367 1.4E-20 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS14895 0d78a715db1da2a95c40ed31eb8c0635 473 SUPERFAMILY SSF50494 31 279 3.26E-59 T 23-04-2016 IPR009003 Peptidase S1, PA clan RR42_RS14895 0d78a715db1da2a95c40ed31eb8c0635 473 SUPERFAMILY SSF50156 375 463 1.58E-12 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS14895 0d78a715db1da2a95c40ed31eb8c0635 473 PANTHER PTHR22939 55 350 4.4E-99 T 23-04-2016 RR42_RS14895 0d78a715db1da2a95c40ed31eb8c0635 473 PANTHER PTHR22939 425 437 4.4E-99 T 23-04-2016 RR42_RS14895 0d78a715db1da2a95c40ed31eb8c0635 473 Gene3D G3DSA:2.40.10.10 162 271 1.2E-40 T 23-04-2016 RR42_RS14895 0d78a715db1da2a95c40ed31eb8c0635 473 PANTHER PTHR22939:SF98 55 350 4.4E-99 T 23-04-2016 RR42_RS14895 0d78a715db1da2a95c40ed31eb8c0635 473 PANTHER PTHR22939:SF98 425 437 4.4E-99 T 23-04-2016 RR42_RS14895 0d78a715db1da2a95c40ed31eb8c0635 473 Pfam PF13180 PDZ domain 271 355 5.0E-8 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS14895 0d78a715db1da2a95c40ed31eb8c0635 473 Pfam PF13365 Trypsin-like peptidase domain 98 231 4.9E-30 T 23-04-2016 RR42_RS14895 0d78a715db1da2a95c40ed31eb8c0635 473 Gene3D G3DSA:2.30.42.10 397 461 3.0E-14 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS14895 0d78a715db1da2a95c40ed31eb8c0635 473 SUPERFAMILY SSF50156 241 365 5.93E-18 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS05810 5efff7df7d4daa7828a451adffc52fbe 186 Gene3D G3DSA:1.10.1740.10 3 112 2.5E-28 T 23-04-2016 RR42_RS05810 5efff7df7d4daa7828a451adffc52fbe 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 175 3.7E-32 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS05810 5efff7df7d4daa7828a451adffc52fbe 186 Pfam PF08281 Sigma-70, region 4 122 172 3.1E-13 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS05810 5efff7df7d4daa7828a451adffc52fbe 186 Gene3D G3DSA:1.10.10.10 114 176 1.1E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS05810 5efff7df7d4daa7828a451adffc52fbe 186 SUPERFAMILY SSF88946 3 102 2.98E-26 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS05810 5efff7df7d4daa7828a451adffc52fbe 186 Pfam PF04542 Sigma-70 region 2 26 92 1.3E-21 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS05810 5efff7df7d4daa7828a451adffc52fbe 186 PANTHER PTHR30173 1 176 8.0E-40 T 23-04-2016 RR42_RS05810 5efff7df7d4daa7828a451adffc52fbe 186 SUPERFAMILY SSF88659 109 176 5.42E-14 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS02165 af16348d99884d93cfae800ef065c997 312 Gene3D G3DSA:1.10.10.10 1 80 1.7E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS02165 af16348d99884d93cfae800ef065c997 312 SUPERFAMILY SSF53850 87 300 2.17E-30 T 23-04-2016 RR42_RS02165 af16348d99884d93cfae800ef065c997 312 PANTHER PTHR30293 1 312 8.6E-102 T 23-04-2016 RR42_RS02165 af16348d99884d93cfae800ef065c997 312 Gene3D G3DSA:3.40.190.10 191 259 2.9E-15 T 23-04-2016 RR42_RS02165 af16348d99884d93cfae800ef065c997 312 Pfam PF03466 LysR substrate binding domain 86 268 1.5E-31 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS02165 af16348d99884d93cfae800ef065c997 312 SUPERFAMILY SSF46785 1 105 2.72E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS02165 af16348d99884d93cfae800ef065c997 312 Gene3D G3DSA:3.40.190.10 87 190 1.8E-21 T 23-04-2016 RR42_RS02165 af16348d99884d93cfae800ef065c997 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.3E-20 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS02165 af16348d99884d93cfae800ef065c997 312 PANTHER PTHR30293:SF0 1 312 8.6E-102 T 23-04-2016 RR42_RS12820 4bd87defe3ff183621400a03307ea799 506 PANTHER PTHR30203:SF6 6 504 1.7E-125 T 23-04-2016 RR42_RS12820 4bd87defe3ff183621400a03307ea799 506 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 30 486 3.1E-150 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RR42_RS12820 4bd87defe3ff183621400a03307ea799 506 Pfam PF02321 Outer membrane efflux protein 308 484 6.4E-24 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RR42_RS12820 4bd87defe3ff183621400a03307ea799 506 Pfam PF02321 Outer membrane efflux protein 85 275 3.6E-22 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RR42_RS12820 4bd87defe3ff183621400a03307ea799 506 PANTHER PTHR30203 6 504 1.7E-125 T 23-04-2016 RR42_RS12820 4bd87defe3ff183621400a03307ea799 506 Gene3D G3DSA:2.20.200.10 336 371 1.1E-22 T 23-04-2016 RR42_RS12820 4bd87defe3ff183621400a03307ea799 506 Gene3D G3DSA:2.20.200.10 119 162 1.1E-22 T 23-04-2016 RR42_RS12820 4bd87defe3ff183621400a03307ea799 506 Gene3D G3DSA:1.20.1600.10 70 109 3.3E-87 T 23-04-2016 RR42_RS12820 4bd87defe3ff183621400a03307ea799 506 Gene3D G3DSA:1.20.1600.10 373 486 3.3E-87 T 23-04-2016 RR42_RS12820 4bd87defe3ff183621400a03307ea799 506 Gene3D G3DSA:1.20.1600.10 163 335 3.3E-87 T 23-04-2016 RR42_RS12820 4bd87defe3ff183621400a03307ea799 506 SUPERFAMILY SSF56954 74 488 6.93E-97 T 23-04-2016 RR42_RS12820 4bd87defe3ff183621400a03307ea799 506 SUPERFAMILY SSF56954 20 39 6.93E-97 T 23-04-2016 RR42_RS04510 597078431c31d781e985fab7cd01f273 457 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 325 436 3.7E-29 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RR42_RS04510 597078431c31d781e985fab7cd01f273 457 Gene3D G3DSA:3.40.50.720 1 211 1.6E-78 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS04510 597078431c31d781e985fab7cd01f273 457 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 433 6.5E-129 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RR42_RS04510 597078431c31d781e985fab7cd01f273 457 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 184 1.9E-66 T 23-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 RR42_RS04510 597078431c31d781e985fab7cd01f273 457 PIRSF PIRSF000124 1 452 4.1E-146 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RR42_RS04510 597078431c31d781e985fab7cd01f273 457 SMART SM00984 325 437 6.6E-46 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RR42_RS04510 597078431c31d781e985fab7cd01f273 457 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 209 301 1.9E-36 T 23-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 RR42_RS04510 597078431c31d781e985fab7cd01f273 457 SUPERFAMILY SSF51735 1 199 1.48E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS04510 597078431c31d781e985fab7cd01f273 457 SUPERFAMILY SSF48179 209 306 1.6E-31 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RR42_RS04510 597078431c31d781e985fab7cd01f273 457 PIRSF PIRSF500134 1 455 1.9E-184 T 23-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 RR42_RS04510 597078431c31d781e985fab7cd01f273 457 Gene3D G3DSA:1.20.5.100 212 239 5.5E-17 T 23-04-2016 RR42_RS04510 597078431c31d781e985fab7cd01f273 457 SUPERFAMILY SSF52413 310 447 8.37E-38 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RR42_RS04510 597078431c31d781e985fab7cd01f273 457 Gene3D G3DSA:3.40.50.720 240 454 6.0E-72 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS04510 597078431c31d781e985fab7cd01f273 457 PANTHER PTHR11374:SF18 1 457 1.2E-244 T 23-04-2016 RR42_RS04510 597078431c31d781e985fab7cd01f273 457 PANTHER PTHR11374 1 457 1.2E-244 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RR42_RS12455 be1fd58c31fa13cd351feebe307a7d56 862 SMART SM01086 768 857 5.9E-37 T 23-04-2016 IPR019489 Clp ATPase, C-terminal RR42_RS12455 be1fd58c31fa13cd351feebe307a7d56 862 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 768 847 1.6E-25 T 23-04-2016 IPR019489 Clp ATPase, C-terminal RR42_RS12455 be1fd58c31fa13cd351feebe307a7d56 862 Gene3D G3DSA:3.40.50.300 158 341 4.5E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12455 be1fd58c31fa13cd351feebe307a7d56 862 PANTHER PTHR11638:SF18 1 857 0.0 T 23-04-2016 RR42_RS12455 be1fd58c31fa13cd351feebe307a7d56 862 SUPERFAMILY SSF52540 158 548 2.77E-96 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12455 be1fd58c31fa13cd351feebe307a7d56 862 Gene3D G3DSA:1.10.8.60 342 427 4.2E-37 T 23-04-2016 RR42_RS12455 be1fd58c31fa13cd351feebe307a7d56 862 Gene3D G3DSA:1.10.8.60 779 857 1.1E-29 T 23-04-2016 RR42_RS12455 be1fd58c31fa13cd351feebe307a7d56 862 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 857 0.0 T 23-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 RR42_RS12455 be1fd58c31fa13cd351feebe307a7d56 862 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 202 334 3.6E-13 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RR42_RS12455 be1fd58c31fa13cd351feebe307a7d56 862 Gene3D G3DSA:1.10.1780.10 1 146 1.1E-42 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 RR42_RS12455 be1fd58c31fa13cd351feebe307a7d56 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 678 696 1.3E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 RR42_RS12455 be1fd58c31fa13cd351feebe307a7d56 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 604 622 1.3E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 RR42_RS12455 be1fd58c31fa13cd351feebe307a7d56 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 711 725 1.3E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 RR42_RS12455 be1fd58c31fa13cd351feebe307a7d56 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 649 667 1.3E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 RR42_RS12455 be1fd58c31fa13cd351feebe307a7d56 862 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 634 652 - T 23-04-2016 IPR028299 ClpA/B, conserved site 2 RR42_RS12455 be1fd58c31fa13cd351feebe307a7d56 862 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 762 1.5E-55 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RR42_RS12455 be1fd58c31fa13cd351feebe307a7d56 862 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 144 3.1E-11 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 RR42_RS12455 be1fd58c31fa13cd351feebe307a7d56 862 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 4.6E-13 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 RR42_RS12455 be1fd58c31fa13cd351feebe307a7d56 862 SUPERFAMILY SSF52540 549 855 1.1E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12455 be1fd58c31fa13cd351feebe307a7d56 862 SUPERFAMILY SSF81923 4 140 4.02E-37 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 RR42_RS12455 be1fd58c31fa13cd351feebe307a7d56 862 SMART SM00382 600 742 2.5E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS12455 be1fd58c31fa13cd351feebe307a7d56 862 SMART SM00382 197 342 1.3E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS12455 be1fd58c31fa13cd351feebe307a7d56 862 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 293 305 - T 23-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 RR42_RS12455 be1fd58c31fa13cd351feebe307a7d56 862 PANTHER PTHR11638 1 857 0.0 T 23-04-2016 RR42_RS12455 be1fd58c31fa13cd351feebe307a7d56 862 Gene3D G3DSA:3.40.50.300 555 778 1.3E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18055 bffb1ce8989b1f65395a3a6adaaea83c 410 Pfam PF14450 Cell division protein FtsA 10 193 8.4E-12 T 23-04-2016 RR42_RS18055 bffb1ce8989b1f65395a3a6adaaea83c 410 Pfam PF14450 Cell division protein FtsA 206 373 1.9E-25 T 23-04-2016 RR42_RS18055 bffb1ce8989b1f65395a3a6adaaea83c 410 SUPERFAMILY SSF53067 197 376 3.64E-48 T 23-04-2016 RR42_RS18055 bffb1ce8989b1f65395a3a6adaaea83c 410 Gene3D G3DSA:3.30.420.40 3 82 1.6E-26 T 23-04-2016 RR42_RS18055 bffb1ce8989b1f65395a3a6adaaea83c 410 Gene3D G3DSA:3.30.420.40 157 208 1.6E-26 T 23-04-2016 RR42_RS18055 bffb1ce8989b1f65395a3a6adaaea83c 410 PANTHER PTHR32432 1 407 1.2E-156 T 23-04-2016 RR42_RS18055 bffb1ce8989b1f65395a3a6adaaea83c 410 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 376 2.2E-147 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 RR42_RS18055 bffb1ce8989b1f65395a3a6adaaea83c 410 Hamap MF_02033 Cell division protein FtsA [ftsA]. 5 410 31.432 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 RR42_RS18055 bffb1ce8989b1f65395a3a6adaaea83c 410 SMART SM00842 9 195 2.1E-108 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 RR42_RS18055 bffb1ce8989b1f65395a3a6adaaea83c 410 PANTHER PTHR32432:SF4 1 407 1.2E-156 T 23-04-2016 RR42_RS18055 bffb1ce8989b1f65395a3a6adaaea83c 410 Pfam PF02491 SHS2 domain inserted in FTSA 84 161 6.4E-33 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 RR42_RS18055 bffb1ce8989b1f65395a3a6adaaea83c 410 Gene3D G3DSA:3.30.1490.110 85 156 1.0E-18 T 23-04-2016 RR42_RS18055 bffb1ce8989b1f65395a3a6adaaea83c 410 Gene3D G3DSA:3.30.420.40 297 351 1.8E-32 T 23-04-2016 RR42_RS18055 bffb1ce8989b1f65395a3a6adaaea83c 410 Gene3D G3DSA:3.30.420.40 209 233 1.8E-32 T 23-04-2016 RR42_RS18055 bffb1ce8989b1f65395a3a6adaaea83c 410 PIRSF PIRSF003101 1 410 7.5E-152 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 RR42_RS18055 bffb1ce8989b1f65395a3a6adaaea83c 410 Gene3D G3DSA:3.90.640.10 234 296 6.6E-19 T 23-04-2016 RR42_RS18055 bffb1ce8989b1f65395a3a6adaaea83c 410 SUPERFAMILY SSF53067 7 196 6.31E-64 T 23-04-2016 RR42_RS15710 1f8e8fd8d3e26d9c219a6ec0d91add24 416 Pfam PF01943 Polysaccharide biosynthesis protein 8 268 6.4E-7 T 23-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 RR42_RS07925 99ac7b46f9ad59b73e8156ac6aba4574 396 SUPERFAMILY SSF75304 8 395 5.1E-86 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RR42_RS07925 99ac7b46f9ad59b73e8156ac6aba4574 396 Gene3D G3DSA:3.90.1300.10 20 394 1.8E-86 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RR42_RS07925 99ac7b46f9ad59b73e8156ac6aba4574 396 ProSitePatterns PS00571 Amidases signature. 110 141 - T 23-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RR42_RS07925 99ac7b46f9ad59b73e8156ac6aba4574 396 PANTHER PTHR11895 21 396 5.8E-84 T 23-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RR42_RS07925 99ac7b46f9ad59b73e8156ac6aba4574 396 Pfam PF01425 Amidase 283 384 1.8E-6 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RR42_RS07925 99ac7b46f9ad59b73e8156ac6aba4574 396 Pfam PF01425 Amidase 21 199 5.1E-52 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RR42_RS01415 aeebf6b5049be75a958fd4e8fd439cc0 229 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 80 1.8E-14 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RR42_RS01415 aeebf6b5049be75a958fd4e8fd439cc0 229 PANTHER PTHR11260 7 196 1.8E-56 T 23-04-2016 RR42_RS01415 aeebf6b5049be75a958fd4e8fd439cc0 229 SUPERFAMILY SSF52833 2 85 4.19E-19 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS01415 aeebf6b5049be75a958fd4e8fd439cc0 229 Gene3D G3DSA:3.40.30.10 9 94 6.2E-20 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS01415 aeebf6b5049be75a958fd4e8fd439cc0 229 SUPERFAMILY SSF47616 81 201 7.11E-18 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS01415 aeebf6b5049be75a958fd4e8fd439cc0 229 PANTHER PTHR11260:SF144 7 196 1.8E-56 T 23-04-2016 RR42_RS01415 aeebf6b5049be75a958fd4e8fd439cc0 229 Gene3D G3DSA:1.20.1050.10 95 206 2.7E-46 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS01415 aeebf6b5049be75a958fd4e8fd439cc0 229 Pfam PF13410 Glutathione S-transferase, C-terminal domain 127 200 2.1E-6 T 23-04-2016 RR42_RS17220 15cd36fa16c4e1e28555fee49f448989 350 Gene3D G3DSA:3.30.1330.10 27 175 3.4E-64 T 23-04-2016 IPR016188 PurM-like, N-terminal domain RR42_RS17220 15cd36fa16c4e1e28555fee49f448989 350 Pfam PF00586 AIR synthase related protein, N-terminal domain 65 169 2.3E-15 T 23-04-2016 IPR016188 PurM-like, N-terminal domain RR42_RS17220 15cd36fa16c4e1e28555fee49f448989 350 SUPERFAMILY SSF56042 176 346 3.44E-61 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RR42_RS17220 15cd36fa16c4e1e28555fee49f448989 350 SUPERFAMILY SSF55326 12 175 2.24E-53 T 23-04-2016 RR42_RS17220 15cd36fa16c4e1e28555fee49f448989 350 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 12 348 47.024 T 23-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RR42_RS17220 15cd36fa16c4e1e28555fee49f448989 350 Pfam PF02769 AIR synthase related protein, C-terminal domain 182 344 2.7E-38 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RR42_RS17220 15cd36fa16c4e1e28555fee49f448989 350 Gene3D G3DSA:3.90.650.10 177 347 4.0E-68 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RR42_RS17220 15cd36fa16c4e1e28555fee49f448989 350 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 12 339 1.1E-139 T 23-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RR42_RS17220 15cd36fa16c4e1e28555fee49f448989 350 PANTHER PTHR10520 12 349 8.7E-209 T 23-04-2016 RR42_RS17650 23e897776f10bf753ee6aec4ec140a73 289 SUPERFAMILY SSF74653 157 281 3.27E-13 T 23-04-2016 RR42_RS17650 23e897776f10bf753ee6aec4ec140a73 289 Gene3D G3DSA:3.30.1150.10 160 281 1.4E-11 T 23-04-2016 RR42_RS07475 7e9b8781543c1fc25330c8a2cf7fa70d 246 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 211 1.3E-68 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 RR42_RS07475 7e9b8781543c1fc25330c8a2cf7fa70d 246 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 40 221 1.1E-52 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 RR42_RS07475 7e9b8781543c1fc25330c8a2cf7fa70d 246 PANTHER PTHR30098 23 226 1.3E-61 T 23-04-2016 RR42_RS07475 7e9b8781543c1fc25330c8a2cf7fa70d 246 SUPERFAMILY SSF55729 2 229 2.38E-81 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS07475 7e9b8781543c1fc25330c8a2cf7fa70d 246 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 246 95.731 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 RR42_RS15815 46df8989ce459b96f896e880d5b260d5 316 Pfam PF16363 GDP-mannose 4,6 dehydratase 11 307 6.8E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS15815 46df8989ce459b96f896e880d5b260d5 316 PANTHER PTHR10366:SF323 9 313 3.2E-172 T 23-04-2016 RR42_RS15815 46df8989ce459b96f896e880d5b260d5 316 PANTHER PTHR10366 9 313 3.2E-172 T 23-04-2016 RR42_RS15815 46df8989ce459b96f896e880d5b260d5 316 SUPERFAMILY SSF51735 4 314 4.57E-87 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS15815 46df8989ce459b96f896e880d5b260d5 316 Gene3D G3DSA:3.40.50.720 3 175 1.5E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS15815 46df8989ce459b96f896e880d5b260d5 316 Gene3D G3DSA:3.90.25.10 176 314 3.5E-55 T 23-04-2016 RR42_RS00535 7d626a6d442b56ddc25c2873f08fba1e 1180 Pfam PF01841 Transglutaminase-like superfamily 130 246 2.1E-19 T 23-04-2016 IPR002931 Transglutaminase-like RR42_RS00535 7d626a6d442b56ddc25c2873f08fba1e 1180 PANTHER PTHR33490:SF1 5 509 3.7E-236 T 23-04-2016 RR42_RS00535 7d626a6d442b56ddc25c2873f08fba1e 1180 Gene3D G3DSA:3.90.260.10 174 250 1.8E-8 T 23-04-2016 IPR002931 Transglutaminase-like RR42_RS00535 7d626a6d442b56ddc25c2873f08fba1e 1180 Pfam PF09899 Putative amidoligase enzyme (DUF2126) 276 1178 0.0 T 23-04-2016 IPR018667 Domain of unknown function DUF2126 RR42_RS00535 7d626a6d442b56ddc25c2873f08fba1e 1180 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 6 84 5.2E-30 T 23-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal RR42_RS00535 7d626a6d442b56ddc25c2873f08fba1e 1180 SMART SM00460 172 248 1.4E-16 T 23-04-2016 IPR002931 Transglutaminase-like RR42_RS00535 7d626a6d442b56ddc25c2873f08fba1e 1180 SUPERFAMILY SSF54001 8 337 4.91E-77 T 23-04-2016 RR42_RS00535 7d626a6d442b56ddc25c2873f08fba1e 1180 PANTHER PTHR33490 5 509 3.7E-236 T 23-04-2016 RR42_RS01795 101bf1853bccef789ac472b98497690b 591 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 129 1.5E-29 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RR42_RS01795 101bf1853bccef789ac472b98497690b 591 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 585 6.8E-160 T 23-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 RR42_RS01795 101bf1853bccef789ac472b98497690b 591 Gene3D G3DSA:1.10.274.10 27 135 6.6E-34 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RR42_RS01795 101bf1853bccef789ac472b98497690b 591 Gene3D G3DSA:3.50.30.10 136 269 1.3E-43 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RR42_RS01795 101bf1853bccef789ac472b98497690b 591 PANTHER PTHR22931 34 573 3.4E-152 T 23-04-2016 RR42_RS01795 101bf1853bccef789ac472b98497690b 591 SUPERFAMILY SSF52009 128 259 1.7E-31 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RR42_RS01795 101bf1853bccef789ac472b98497690b 591 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 198 209 - T 23-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 RR42_RS01795 101bf1853bccef789ac472b98497690b 591 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 470 485 9.6E-24 T 23-04-2016 RR42_RS01795 101bf1853bccef789ac472b98497690b 591 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 487 502 9.6E-24 T 23-04-2016 RR42_RS01795 101bf1853bccef789ac472b98497690b 591 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 523 535 9.6E-24 T 23-04-2016 RR42_RS01795 101bf1853bccef789ac472b98497690b 591 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 307 326 9.6E-24 T 23-04-2016 RR42_RS01795 101bf1853bccef789ac472b98497690b 591 PANTHER PTHR22931:SF28 34 573 3.4E-152 T 23-04-2016 RR42_RS01795 101bf1853bccef789ac472b98497690b 591 Pfam PF00391 PEP-utilising enzyme, mobile domain 168 239 1.9E-23 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RR42_RS01795 101bf1853bccef789ac472b98497690b 591 Gene3D G3DSA:3.20.20.60 270 587 4.0E-100 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS01795 101bf1853bccef789ac472b98497690b 591 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 470 488 - T 23-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RR42_RS01795 101bf1853bccef789ac472b98497690b 591 SUPERFAMILY SSF47831 28 146 1.83E-30 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RR42_RS01795 101bf1853bccef789ac472b98497690b 591 SUPERFAMILY SSF51621 263 572 9.42E-100 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS01795 101bf1853bccef789ac472b98497690b 591 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 265 564 1.1E-110 T 23-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RR42_RS01795 101bf1853bccef789ac472b98497690b 591 PIRSF PIRSF000732 1 591 6.3E-210 T 23-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 RR42_RS09340 44d47360c6cb610557eef38434985358 210 Pfam PF01810 LysE type translocator 17 207 1.5E-29 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RR42_RS09340 44d47360c6cb610557eef38434985358 210 PANTHER PTHR30086:SF7 2 210 7.4E-95 T 23-04-2016 RR42_RS09340 44d47360c6cb610557eef38434985358 210 PIRSF PIRSF006324 1 209 4.6E-42 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RR42_RS09340 44d47360c6cb610557eef38434985358 210 PANTHER PTHR30086 2 210 7.4E-95 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RR42_RS00135 1c93013adc64d4c73111f2ede80c5115 816 SUPERFAMILY SSF51126 18 272 1.04E-31 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor RR42_RS00135 1c93013adc64d4c73111f2ede80c5115 816 PANTHER PTHR32093:SF41 9 123 6.1E-12 T 23-04-2016 RR42_RS00135 1c93013adc64d4c73111f2ede80c5115 816 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 44 120 1.8E-19 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal RR42_RS00135 1c93013adc64d4c73111f2ede80c5115 816 SMART SM00912 26 126 1.4E-10 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal RR42_RS00135 1c93013adc64d4c73111f2ede80c5115 816 Gene3D G3DSA:2.160.20.10 17 305 6.4E-53 T 23-04-2016 IPR012334 Pectin lyase fold RR42_RS00135 1c93013adc64d4c73111f2ede80c5115 816 Pfam PF05860 haemagglutination activity domain 11 123 8.5E-25 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal RR42_RS00135 1c93013adc64d4c73111f2ede80c5115 816 PANTHER PTHR32093 9 123 6.1E-12 T 23-04-2016 RR42_RS18215 25be12cd56f4ca5d5be49d6dd3d60064 397 Pfam PF07687 Peptidase dimerisation domain 185 264 3.7E-8 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS18215 25be12cd56f4ca5d5be49d6dd3d60064 397 Pfam PF01546 Peptidase family M20/M25/M40 73 357 7.2E-37 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RR42_RS18215 25be12cd56f4ca5d5be49d6dd3d60064 397 SUPERFAMILY SSF53187 298 394 7.18E-90 T 23-04-2016 RR42_RS18215 25be12cd56f4ca5d5be49d6dd3d60064 397 SUPERFAMILY SSF53187 3 197 7.18E-90 T 23-04-2016 RR42_RS18215 25be12cd56f4ca5d5be49d6dd3d60064 397 SUPERFAMILY SSF55031 183 296 2.22E-31 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS18215 25be12cd56f4ca5d5be49d6dd3d60064 397 Gene3D G3DSA:3.30.70.360 181 297 9.9E-42 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS18215 25be12cd56f4ca5d5be49d6dd3d60064 397 PANTHER PTHR11014 1 397 1.5E-157 T 23-04-2016 RR42_RS18215 25be12cd56f4ca5d5be49d6dd3d60064 397 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 15 382 1.9E-108 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 RR42_RS18215 25be12cd56f4ca5d5be49d6dd3d60064 397 PIRSF PIRSF005962 2 397 3.5E-130 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 RR42_RS18215 25be12cd56f4ca5d5be49d6dd3d60064 397 PANTHER PTHR11014:SF63 1 397 1.5E-157 T 23-04-2016 RR42_RS18215 25be12cd56f4ca5d5be49d6dd3d60064 397 Gene3D G3DSA:3.40.630.10 5 178 1.7E-103 T 23-04-2016 RR42_RS18215 25be12cd56f4ca5d5be49d6dd3d60064 397 Gene3D G3DSA:3.40.630.10 298 395 1.7E-103 T 23-04-2016 RR42_RS08900 50afa1f87308723062f575aafda5b44e 639 Gene3D G3DSA:3.30.565.10 490 617 9.6E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS08900 50afa1f87308723062f575aafda5b44e 639 SUPERFAMILY SSF55874 492 616 1.02E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS08900 50afa1f87308723062f575aafda5b44e 639 SUPERFAMILY SSF158472 181 229 1.44E-8 T 23-04-2016 RR42_RS08900 50afa1f87308723062f575aafda5b44e 639 Pfam PF00672 HAMP domain 163 227 1.8E-10 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS08900 50afa1f87308723062f575aafda5b44e 639 SMART SM00304 179 231 2.1E-12 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS08900 50afa1f87308723062f575aafda5b44e 639 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 527 618 2.3E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS08900 50afa1f87308723062f575aafda5b44e 639 SMART SM00387 524 619 2.7E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS08900 50afa1f87308723062f575aafda5b44e 639 PIRSF PIRSF003167 1 629 2.2E-164 T 23-04-2016 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 RR42_RS08900 50afa1f87308723062f575aafda5b44e 639 Gene3D G3DSA:3.30.450.40 244 406 5.1E-18 T 23-04-2016 IPR029016 GAF domain-like RR42_RS08900 50afa1f87308723062f575aafda5b44e 639 Pfam PF13185 GAF domain 265 403 1.6E-6 T 23-04-2016 IPR003018 GAF domain GO:0005515 RR42_RS08900 50afa1f87308723062f575aafda5b44e 639 PANTHER PTHR24421:SF25 414 632 4.1E-51 T 23-04-2016 RR42_RS08900 50afa1f87308723062f575aafda5b44e 639 PANTHER PTHR24421:SF25 41 290 4.1E-51 T 23-04-2016 RR42_RS08900 50afa1f87308723062f575aafda5b44e 639 Pfam PF07730 Histidine kinase 419 485 4.1E-15 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RR42_RS08900 50afa1f87308723062f575aafda5b44e 639 PANTHER PTHR24421 414 632 4.1E-51 T 23-04-2016 RR42_RS08900 50afa1f87308723062f575aafda5b44e 639 PANTHER PTHR24421 41 290 4.1E-51 T 23-04-2016 RR42_RS08900 50afa1f87308723062f575aafda5b44e 639 SUPERFAMILY SSF55781 239 403 7.2E-17 T 23-04-2016 IPR029016 GAF domain-like RR42_RS08900 50afa1f87308723062f575aafda5b44e 639 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 32 121 8.5E-21 T 23-04-2016 IPR029095 NarX-like, N-terminal RR42_RS25095 b6e4d61122806ab3b1f87b719aa97014 296 Pfam PF16193 AAA C-terminal domain 75 150 1.2E-21 T 23-04-2016 IPR032423 AAA ATPase, C-terminal domain RR42_RS25095 b6e4d61122806ab3b1f87b719aa97014 296 PANTHER PTHR13779 1 295 4.9E-131 T 23-04-2016 RR42_RS25095 b6e4d61122806ab3b1f87b719aa97014 296 Gene3D G3DSA:1.10.8.60 43 106 4.0E-9 T 23-04-2016 RR42_RS25095 b6e4d61122806ab3b1f87b719aa97014 296 Gene3D G3DSA:3.40.50.300 1 42 2.2E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS25095 b6e4d61122806ab3b1f87b719aa97014 296 Pfam PF12002 MgsA AAA+ ATPase C terminal 151 295 4.5E-60 T 23-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal RR42_RS25095 b6e4d61122806ab3b1f87b719aa97014 296 Gene3D G3DSA:1.20.272.10 132 230 2.1E-43 T 23-04-2016 RR42_RS25095 b6e4d61122806ab3b1f87b719aa97014 296 PANTHER PTHR13779:SF7 1 295 4.9E-131 T 23-04-2016 RR42_RS25095 b6e4d61122806ab3b1f87b719aa97014 296 SUPERFAMILY SSF48019 135 294 2.04E-66 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 RR42_RS25095 b6e4d61122806ab3b1f87b719aa97014 296 Gene3D G3DSA:1.10.3710.10 232 295 1.7E-22 T 23-04-2016 RR42_RS25095 b6e4d61122806ab3b1f87b719aa97014 296 SUPERFAMILY SSF52540 1 119 2.97E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS08740 c800e0ad9a1cddefcca61bbcb12a5e97 887 SUPERFAMILY SSF52540 388 625 3.01E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS08740 c800e0ad9a1cddefcca61bbcb12a5e97 887 Gene3D G3DSA:3.40.50.300 704 862 1.5E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS08740 c800e0ad9a1cddefcca61bbcb12a5e97 887 Pfam PF00176 SNF2 family N-terminal domain 432 694 3.7E-49 T 23-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 RR42_RS08740 c800e0ad9a1cddefcca61bbcb12a5e97 887 SMART SM00487 409 604 3.8E-23 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RR42_RS08740 c800e0ad9a1cddefcca61bbcb12a5e97 887 Gene3D G3DSA:3.40.50.300 407 586 4.5E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS08740 c800e0ad9a1cddefcca61bbcb12a5e97 887 SUPERFAMILY SSF52540 628 881 3.82E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS08740 c800e0ad9a1cddefcca61bbcb12a5e97 887 PANTHER PTHR10799 408 876 2.7E-140 T 23-04-2016 RR42_RS08740 c800e0ad9a1cddefcca61bbcb12a5e97 887 Pfam PF00271 Helicase conserved C-terminal domain 714 822 1.8E-15 T 23-04-2016 IPR001650 Helicase, C-terminal RR42_RS08740 c800e0ad9a1cddefcca61bbcb12a5e97 887 Pfam PF12419 SNF2 Helicase protein 231 361 3.8E-27 T 23-04-2016 IPR022138 Helicase SWF/SNF-related RR42_RS08740 c800e0ad9a1cddefcca61bbcb12a5e97 887 SMART SM00490 738 822 5.0E-19 T 23-04-2016 IPR001650 Helicase, C-terminal RR42_RS03010 e5b649235c60f7cd7fe08b9d206ba8b5 392 Gene3D G3DSA:3.40.47.10 150 187 6.0E-53 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS03010 e5b649235c60f7cd7fe08b9d206ba8b5 392 Gene3D G3DSA:3.40.47.10 276 391 6.0E-53 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS03010 e5b649235c60f7cd7fe08b9d206ba8b5 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 4.5E-128 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RR42_RS03010 e5b649235c60f7cd7fe08b9d206ba8b5 392 Gene3D G3DSA:3.40.47.10 4 126 5.8E-64 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS03010 e5b649235c60f7cd7fe08b9d206ba8b5 392 Gene3D G3DSA:3.40.47.10 188 275 5.8E-64 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS03010 e5b649235c60f7cd7fe08b9d206ba8b5 392 PIRSF PIRSF000429 1 392 2.2E-113 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RR42_RS03010 e5b649235c60f7cd7fe08b9d206ba8b5 392 Pfam PF02803 Thiolase, C-terminal domain 271 391 1.1E-37 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RR42_RS03010 e5b649235c60f7cd7fe08b9d206ba8b5 392 Pfam PF00108 Thiolase, N-terminal domain 5 261 2.5E-65 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RR42_RS03010 e5b649235c60f7cd7fe08b9d206ba8b5 392 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 23-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RR42_RS03010 e5b649235c60f7cd7fe08b9d206ba8b5 392 PANTHER PTHR18919 1 392 4.8E-181 T 23-04-2016 RR42_RS03010 e5b649235c60f7cd7fe08b9d206ba8b5 392 PANTHER PTHR18919:SF71 1 392 4.8E-181 T 23-04-2016 RR42_RS03010 e5b649235c60f7cd7fe08b9d206ba8b5 392 SUPERFAMILY SSF53901 272 391 2.42E-37 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS03010 e5b649235c60f7cd7fe08b9d206ba8b5 392 SUPERFAMILY SSF53901 1 266 2.76E-68 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS15005 0c2e9f1933f8487dd45ab5fb908f905f 636 ProSitePatterns PS00801 Transketolase signature 1. 31 50 - T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RR42_RS15005 0c2e9f1933f8487dd45ab5fb908f905f 636 Pfam PF02780 Transketolase, C-terminal domain 506 616 1.1E-25 T 23-04-2016 IPR033248 Transketolase, C-terminal domain RR42_RS15005 0c2e9f1933f8487dd45ab5fb908f905f 636 Gene3D G3DSA:3.40.50.970 20 197 2.5E-80 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS15005 0c2e9f1933f8487dd45ab5fb908f905f 636 Gene3D G3DSA:3.40.50.970 238 334 2.5E-80 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS15005 0c2e9f1933f8487dd45ab5fb908f905f 636 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 5 625 46.469 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RR42_RS15005 0c2e9f1933f8487dd45ab5fb908f905f 636 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 23-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RR42_RS15005 0c2e9f1933f8487dd45ab5fb908f905f 636 Pfam PF02779 Transketolase, pyrimidine binding domain 320 479 1.1E-39 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RR42_RS15005 0c2e9f1933f8487dd45ab5fb908f905f 636 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 6 282 1.2E-118 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RR42_RS15005 0c2e9f1933f8487dd45ab5fb908f905f 636 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 7 622 8.6E-262 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RR42_RS15005 0c2e9f1933f8487dd45ab5fb908f905f 636 PANTHER PTHR11624:SF20 237 636 0.0 T 23-04-2016 RR42_RS15005 0c2e9f1933f8487dd45ab5fb908f905f 636 PANTHER PTHR11624:SF20 19 214 0.0 T 23-04-2016 RR42_RS15005 0c2e9f1933f8487dd45ab5fb908f905f 636 SUPERFAMILY SSF52518 4 195 1.48E-84 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS15005 0c2e9f1933f8487dd45ab5fb908f905f 636 SUPERFAMILY SSF52518 239 381 1.48E-84 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS15005 0c2e9f1933f8487dd45ab5fb908f905f 636 SMART SM00861 319 483 2.6E-70 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RR42_RS15005 0c2e9f1933f8487dd45ab5fb908f905f 636 Gene3D G3DSA:3.40.50.920 495 623 1.6E-35 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RR42_RS15005 0c2e9f1933f8487dd45ab5fb908f905f 636 SUPERFAMILY SSF52518 316 503 4.71E-58 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS15005 0c2e9f1933f8487dd45ab5fb908f905f 636 Gene3D G3DSA:3.40.50.970 335 482 2.8E-38 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS15005 0c2e9f1933f8487dd45ab5fb908f905f 636 SUPERFAMILY SSF52922 492 625 9.95E-32 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RR42_RS15005 0c2e9f1933f8487dd45ab5fb908f905f 636 PANTHER PTHR11624 237 636 0.0 T 23-04-2016 IPR033247 Transketolase family RR42_RS15005 0c2e9f1933f8487dd45ab5fb908f905f 636 PANTHER PTHR11624 19 214 0.0 T 23-04-2016 IPR033247 Transketolase family RR42_RS19785 c948c4229d4a55289eadca38a346262d 421 PANTHER PTHR32494:SF5 12 421 1.0E-146 T 23-04-2016 RR42_RS19785 c948c4229d4a55289eadca38a346262d 421 SUPERFAMILY SSF53187 13 228 6.81E-76 T 23-04-2016 RR42_RS19785 c948c4229d4a55289eadca38a346262d 421 SUPERFAMILY SSF53187 340 415 6.81E-76 T 23-04-2016 RR42_RS19785 c948c4229d4a55289eadca38a346262d 421 Gene3D G3DSA:3.40.630.10 11 230 5.0E-97 T 23-04-2016 RR42_RS19785 c948c4229d4a55289eadca38a346262d 421 Gene3D G3DSA:3.40.630.10 355 416 5.0E-97 T 23-04-2016 RR42_RS19785 c948c4229d4a55289eadca38a346262d 421 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 30 408 4.5E-110 T 23-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 RR42_RS19785 c948c4229d4a55289eadca38a346262d 421 Pfam PF01546 Peptidase family M20/M25/M40 82 411 7.9E-25 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RR42_RS19785 c948c4229d4a55289eadca38a346262d 421 PANTHER PTHR32494 12 421 1.0E-146 T 23-04-2016 RR42_RS19785 c948c4229d4a55289eadca38a346262d 421 Gene3D G3DSA:3.30.70.360 231 330 2.1E-31 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS19785 c948c4229d4a55289eadca38a346262d 421 SUPERFAMILY SSF55031 218 328 1.34E-24 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS19785 c948c4229d4a55289eadca38a346262d 421 PIRSF PIRSF001235 8 418 2.5E-124 T 23-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 RR42_RS37770 3741d556fde7b2d23b0e0c1f4f96275d 234 SUPERFAMILY SSF53474 7 216 3.45E-26 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS37770 3741d556fde7b2d23b0e0c1f4f96275d 234 Pfam PF12697 Alpha/beta hydrolase family 30 160 9.6E-11 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS37770 3741d556fde7b2d23b0e0c1f4f96275d 234 PANTHER PTHR10992 15 210 8.8E-14 T 23-04-2016 RR42_RS37770 3741d556fde7b2d23b0e0c1f4f96275d 234 Gene3D G3DSA:3.40.50.1820 7 211 2.1E-22 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS16140 46cf4f182661c11f983a122b329ad0db 646 Gene3D G3DSA:2.40.170.20 191 644 5.2E-84 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RR42_RS16140 46cf4f182661c11f983a122b329ad0db 646 Gene3D G3DSA:2.170.130.10 56 190 1.1E-35 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RR42_RS16140 46cf4f182661c11f983a122b329ad0db 646 PANTHER PTHR32552 1 645 2.6E-48 T 23-04-2016 RR42_RS16140 46cf4f182661c11f983a122b329ad0db 646 Pfam PF00593 TonB dependent receptor 426 642 1.8E-27 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RR42_RS16140 46cf4f182661c11f983a122b329ad0db 646 Pfam PF07715 TonB-dependent Receptor Plug Domain 85 185 1.9E-25 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RR42_RS16140 46cf4f182661c11f983a122b329ad0db 646 SUPERFAMILY SSF56935 68 643 6.02E-109 T 23-04-2016 RR42_RS04515 a497a4139f2d0c7d593c063c7f159e3d 315 PANTHER PTHR10584 1 306 2.2E-112 T 23-04-2016 RR42_RS04515 a497a4139f2d0c7d593c063c7f159e3d 315 Gene3D G3DSA:3.40.1190.20 15 310 7.9E-65 T 23-04-2016 IPR029056 Ribokinase-like RR42_RS04515 a497a4139f2d0c7d593c063c7f159e3d 315 Pfam PF00294 pfkB family carbohydrate kinase 15 303 5.2E-45 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB RR42_RS04515 a497a4139f2d0c7d593c063c7f159e3d 315 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 9 311 1.3E-122 T 23-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 RR42_RS04515 a497a4139f2d0c7d593c063c7f159e3d 315 SUPERFAMILY SSF53613 15 310 1.87E-57 T 23-04-2016 IPR029056 Ribokinase-like RR42_RS04515 a497a4139f2d0c7d593c063c7f159e3d 315 PANTHER PTHR10584:SF159 1 306 2.2E-112 T 23-04-2016 RR42_RS09775 4c6064549a35c4c0a45d1c8314da9b19 140 SUPERFAMILY SSF49764 21 139 2.59E-36 T 23-04-2016 IPR008978 HSP20-like chaperone RR42_RS09775 4c6064549a35c4c0a45d1c8314da9b19 140 Pfam PF00011 Hsp20/alpha crystallin family 39 137 2.8E-20 T 23-04-2016 IPR002068 Alpha crystallin/Hsp20 domain RR42_RS09775 4c6064549a35c4c0a45d1c8314da9b19 140 Gene3D G3DSA:2.60.40.790 23 139 1.3E-35 T 23-04-2016 IPR008978 HSP20-like chaperone RR42_RS09775 4c6064549a35c4c0a45d1c8314da9b19 140 PANTHER PTHR11527 38 140 7.8E-26 T 23-04-2016 IPR031107 Small heat shock protein HSP20 RR42_RS09775 4c6064549a35c4c0a45d1c8314da9b19 140 PANTHER PTHR11527:SF118 38 140 7.8E-26 T 23-04-2016 RR42_RS04675 ec7fab3f97376a954d5bbeca4d8d95d5 195 Gene3D G3DSA:1.20.1290.10 67 188 3.7E-36 T 23-04-2016 IPR029032 AhpD-like RR42_RS04675 ec7fab3f97376a954d5bbeca4d8d95d5 195 PANTHER PTHR35446 4 195 2.4E-99 T 23-04-2016 RR42_RS04675 ec7fab3f97376a954d5bbeca4d8d95d5 195 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 8 184 8.4E-70 T 23-04-2016 IPR010195 Uncharacterised peroxidase-related RR42_RS04675 ec7fab3f97376a954d5bbeca4d8d95d5 195 Pfam PF02627 Carboxymuconolactone decarboxylase family 47 132 3.4E-14 T 23-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RR42_RS04675 ec7fab3f97376a954d5bbeca4d8d95d5 195 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 65 113 8.6E-13 T 23-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RR42_RS04675 ec7fab3f97376a954d5bbeca4d8d95d5 195 Gene3D G3DSA:1.20.5.810 15 66 3.8E-31 T 23-04-2016 RR42_RS04675 ec7fab3f97376a954d5bbeca4d8d95d5 195 PANTHER PTHR35446:SF2 4 195 2.4E-99 T 23-04-2016 RR42_RS04675 ec7fab3f97376a954d5bbeca4d8d95d5 195 SUPERFAMILY SSF69118 7 192 3.01E-58 T 23-04-2016 IPR029032 AhpD-like RR42_RS19505 183334c05f52be21f7a96e6fa166276e 469 Pfam PF05134 Type II secretion system (T2SS), protein L 5 303 2.1E-41 T 23-04-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain RR42_RS19505 183334c05f52be21f7a96e6fa166276e 469 Pfam PF12693 GspL periplasmic domain 310 466 1.0E-20 T 23-04-2016 IPR025691 GspL periplasmic domain RR42_RS19505 183334c05f52be21f7a96e6fa166276e 469 SUPERFAMILY SSF53067 2 168 4.14E-20 T 23-04-2016 RR42_RS11035 c5eb39a33bfd033aadebffccba0d5e4a 300 Gene3D G3DSA:3.40.50.720 6 257 1.1E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS11035 c5eb39a33bfd033aadebffccba0d5e4a 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 5.2E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11035 c5eb39a33bfd033aadebffccba0d5e4a 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 5.2E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11035 c5eb39a33bfd033aadebffccba0d5e4a 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 5.2E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11035 c5eb39a33bfd033aadebffccba0d5e4a 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 6.9E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11035 c5eb39a33bfd033aadebffccba0d5e4a 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.9E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11035 c5eb39a33bfd033aadebffccba0d5e4a 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 6.9E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11035 c5eb39a33bfd033aadebffccba0d5e4a 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 6.9E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11035 c5eb39a33bfd033aadebffccba0d5e4a 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 6.9E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11035 c5eb39a33bfd033aadebffccba0d5e4a 300 Pfam PF00106 short chain dehydrogenase 7 205 3.2E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11035 c5eb39a33bfd033aadebffccba0d5e4a 300 SUPERFAMILY SSF51735 1 262 3.94E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS11035 c5eb39a33bfd033aadebffccba0d5e4a 300 PANTHER PTHR24322 161 195 6.3E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11035 c5eb39a33bfd033aadebffccba0d5e4a 300 PANTHER PTHR24322 11 145 6.3E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10720 6b5380c17be9ce38a39e62f6af9ce196 645 SMART SM00882 1 245 1.3E-69 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RR42_RS10720 6b5380c17be9ce38a39e62f6af9ce196 645 SMART SM00882 283 491 0.0012 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RR42_RS10720 6b5380c17be9ce38a39e62f6af9ce196 645 SUPERFAMILY SSF100950 1 257 1.79E-86 T 23-04-2016 RR42_RS10720 6b5380c17be9ce38a39e62f6af9ce196 645 PANTHER PTHR13707 1 511 6.6E-235 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RR42_RS10720 6b5380c17be9ce38a39e62f6af9ce196 645 SUPERFAMILY SSF100950 277 520 3.91E-75 T 23-04-2016 RR42_RS10720 6b5380c17be9ce38a39e62f6af9ce196 645 Gene3D G3DSA:3.40.1080.10 1 244 2.9E-69 T 23-04-2016 RR42_RS10720 6b5380c17be9ce38a39e62f6af9ce196 645 Pfam PF01144 Coenzyme A transferase 1 245 8.7E-35 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RR42_RS10720 6b5380c17be9ce38a39e62f6af9ce196 645 Gene3D G3DSA:3.40.810.20 281 503 5.9E-62 T 23-04-2016 RR42_RS10720 6b5380c17be9ce38a39e62f6af9ce196 645 PANTHER PTHR13707:SF38 1 511 6.6E-235 T 23-04-2016 RR42_RS09175 62604784f161855a7e80f5d5ef1f7edf 403 SUPERFAMILY SSF46458 2 142 2.83E-36 T 23-04-2016 IPR009050 Globin-like RR42_RS09175 62604784f161855a7e80f5d5ef1f7edf 403 Pfam PF00042 Globin 9 102 1.6E-7 T 23-04-2016 IPR000971 Globin GO:0019825|GO:0020037 RR42_RS09175 62604784f161855a7e80f5d5ef1f7edf 403 SUPERFAMILY SSF52343 261 396 4.45E-31 T 23-04-2016 RR42_RS09175 62604784f161855a7e80f5d5ef1f7edf 403 SUPERFAMILY SSF63380 148 257 2.72E-26 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RR42_RS09175 62604784f161855a7e80f5d5ef1f7edf 403 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 182 192 9.3E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS09175 62604784f161855a7e80f5d5ef1f7edf 403 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 202 209 9.3E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS09175 62604784f161855a7e80f5d5ef1f7edf 403 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 232 241 9.3E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS09175 62604784f161855a7e80f5d5ef1f7edf 403 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 268 287 9.3E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS09175 62604784f161855a7e80f5d5ef1f7edf 403 PANTHER PTHR22924 1 398 2.1E-102 T 23-04-2016 RR42_RS09175 62604784f161855a7e80f5d5ef1f7edf 403 Gene3D G3DSA:1.10.490.10 2 142 2.4E-47 T 23-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 RR42_RS09175 62604784f161855a7e80f5d5ef1f7edf 403 Pfam PF00970 Oxidoreductase FAD-binding domain 154 257 4.9E-8 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain RR42_RS09175 62604784f161855a7e80f5d5ef1f7edf 403 PANTHER PTHR22924:SF49 1 398 2.1E-102 T 23-04-2016 RR42_RS09175 62604784f161855a7e80f5d5ef1f7edf 403 Pfam PF00175 Oxidoreductase NAD-binding domain 269 375 3.2E-9 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RR42_RS09175 62604784f161855a7e80f5d5ef1f7edf 403 Gene3D G3DSA:3.40.50.80 262 397 2.5E-29 T 23-04-2016 RR42_RS09175 62604784f161855a7e80f5d5ef1f7edf 403 Gene3D G3DSA:2.40.30.10 152 258 2.8E-30 T 23-04-2016 RR42_RS13190 704a777fa30c79c049016d76cfae5f7e 284 Gene3D G3DSA:3.10.350.10 59 104 3.2E-15 T 23-04-2016 IPR018392 LysM domain RR42_RS13190 704a777fa30c79c049016d76cfae5f7e 284 Pfam PF01551 Peptidase family M23 184 277 4.6E-30 T 23-04-2016 IPR016047 Peptidase M23 RR42_RS13190 704a777fa30c79c049016d76cfae5f7e 284 Pfam PF01476 LysM domain 61 103 2.7E-9 T 23-04-2016 IPR018392 LysM domain RR42_RS13190 704a777fa30c79c049016d76cfae5f7e 284 SMART SM00257 60 104 1.2E-9 T 23-04-2016 IPR018392 LysM domain RR42_RS13190 704a777fa30c79c049016d76cfae5f7e 284 Gene3D G3DSA:2.70.70.10 155 282 5.8E-40 T 23-04-2016 RR42_RS13190 704a777fa30c79c049016d76cfae5f7e 284 SUPERFAMILY SSF51261 60 281 6.28E-46 T 23-04-2016 IPR011055 Duplicated hybrid motif RR42_RS13190 704a777fa30c79c049016d76cfae5f7e 284 PANTHER PTHR21666 170 284 2.2E-40 T 23-04-2016 RR42_RS37780 8ebe9eba6a3cde7f859043b1ef05b1fe 256 SMART SM00062 20 245 6.5E-47 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RR42_RS37780 8ebe9eba6a3cde7f859043b1ef05b1fe 256 PANTHER PTHR18966 20 245 6.7E-31 T 23-04-2016 RR42_RS37780 8ebe9eba6a3cde7f859043b1ef05b1fe 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 21 243 2.7E-49 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RR42_RS37780 8ebe9eba6a3cde7f859043b1ef05b1fe 256 Gene3D G3DSA:3.40.190.10 98 201 5.5E-20 T 23-04-2016 RR42_RS37780 8ebe9eba6a3cde7f859043b1ef05b1fe 256 PANTHER PTHR18966:SF208 20 245 6.7E-31 T 23-04-2016 RR42_RS37780 8ebe9eba6a3cde7f859043b1ef05b1fe 256 Gene3D G3DSA:3.40.190.10 204 245 5.3E-30 T 23-04-2016 RR42_RS37780 8ebe9eba6a3cde7f859043b1ef05b1fe 256 Gene3D G3DSA:3.40.190.10 20 97 5.3E-30 T 23-04-2016 RR42_RS37780 8ebe9eba6a3cde7f859043b1ef05b1fe 256 SUPERFAMILY SSF53850 20 246 1.52E-50 T 23-04-2016 RR42_RS02700 6aa7c2333b57b49ca465f9716bf7247f 351 SUPERFAMILY SSF52540 33 263 1.71E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02700 6aa7c2333b57b49ca465f9716bf7247f 351 PANTHER PTHR13779 25 343 3.7E-183 T 23-04-2016 RR42_RS02700 6aa7c2333b57b49ca465f9716bf7247f 351 SUPERFAMILY SSF46785 269 343 7.26E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS02700 6aa7c2333b57b49ca465f9716bf7247f 351 SMART SM00382 64 191 1.8E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS02700 6aa7c2333b57b49ca465f9716bf7247f 351 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 266 339 1.9E-32 T 23-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 RR42_RS02700 6aa7c2333b57b49ca465f9716bf7247f 351 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 23 248 2.3E-117 T 23-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 RR42_RS02700 6aa7c2333b57b49ca465f9716bf7247f 351 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 270 343 3.0E-33 T 23-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 RR42_RS02700 6aa7c2333b57b49ca465f9716bf7247f 351 Gene3D G3DSA:3.40.50.300 33 189 5.6E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02700 6aa7c2333b57b49ca465f9716bf7247f 351 Gene3D G3DSA:1.10.8.60 196 267 4.0E-33 T 23-04-2016 RR42_RS02700 6aa7c2333b57b49ca465f9716bf7247f 351 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 37 339 5.4E-147 T 23-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 RR42_RS02700 6aa7c2333b57b49ca465f9716bf7247f 351 PANTHER PTHR13779:SF25 25 343 3.7E-183 T 23-04-2016 RR42_RS02700 6aa7c2333b57b49ca465f9716bf7247f 351 Gene3D G3DSA:1.10.10.10 270 340 1.8E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS02700 6aa7c2333b57b49ca465f9716bf7247f 351 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 351 182.042 T 23-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 RR42_RS19330 88b693348917e08320fad596b05fc0a5 182 PANTHER PTHR11560 3 180 2.7E-47 T 23-04-2016 RR42_RS19330 88b693348917e08320fad596b05fc0a5 182 SUPERFAMILY SSF160369 4 159 5.75E-50 T 23-04-2016 RR42_RS19330 88b693348917e08320fad596b05fc0a5 182 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 160 27.326 T 23-04-2016 IPR022973 Ribosomal protein L10 RR42_RS19330 88b693348917e08320fad596b05fc0a5 182 Pfam PF00466 Ribosomal protein L10 5 100 2.7E-22 T 23-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 RR42_RS06605 0a013bc61bbc61c1878201e32ff7d94c 156 SUPERFAMILY SSF54364 1 62 2.48E-22 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 RR42_RS06605 0a013bc61bbc61c1878201e32ff7d94c 156 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 2 155 4.8E-63 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 RR42_RS06605 0a013bc61bbc61c1878201e32ff7d94c 156 PANTHER PTHR10938 1 156 7.4E-59 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 RR42_RS06605 0a013bc61bbc61c1878201e32ff7d94c 156 Gene3D G3DSA:3.30.110.10 64 156 2.4E-42 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 RR42_RS06605 0a013bc61bbc61c1878201e32ff7d94c 156 ProSitePatterns PS00938 Initiation factor 3 signature. 43 56 - T 23-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 RR42_RS06605 0a013bc61bbc61c1878201e32ff7d94c 156 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 2 60 3.6E-24 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 RR42_RS06605 0a013bc61bbc61c1878201e32ff7d94c 156 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 68 153 7.9E-40 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 RR42_RS06605 0a013bc61bbc61c1878201e32ff7d94c 156 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 155 26.365 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 RR42_RS06605 0a013bc61bbc61c1878201e32ff7d94c 156 Gene3D G3DSA:3.10.20.80 2 62 1.3E-26 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 RR42_RS06605 0a013bc61bbc61c1878201e32ff7d94c 156 SUPERFAMILY SSF55200 67 156 3.27E-35 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 RR42_RS00260 29ca60f31220000050db60f62b182a79 214 SUPERFAMILY SSF161098 12 213 3.4E-38 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS00260 29ca60f31220000050db60f62b182a79 214 PANTHER PTHR30614 4 213 6.3E-71 T 23-04-2016 RR42_RS00260 29ca60f31220000050db60f62b182a79 214 PANTHER PTHR30614:SF8 4 213 6.3E-71 T 23-04-2016 RR42_RS00260 29ca60f31220000050db60f62b182a79 214 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 212 4.2E-14 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS00260 29ca60f31220000050db60f62b182a79 214 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 106 8.2E-23 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RR42_RS00260 29ca60f31220000050db60f62b182a79 214 Gene3D G3DSA:1.10.3720.10 12 213 8.1E-38 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS03475 7b8180769b04817f33f3a76a62205ce3 461 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 20 452 28.208 T 23-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 RR42_RS03475 7b8180769b04817f33f3a76a62205ce3 461 PANTHER PTHR30008 13 449 1.3E-151 T 23-04-2016 RR42_RS03475 7b8180769b04817f33f3a76a62205ce3 461 PANTHER PTHR30008:SF0 13 449 1.3E-151 T 23-04-2016 RR42_RS03475 7b8180769b04817f33f3a76a62205ce3 461 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 25 450 7.2E-142 T 23-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 RR42_RS03475 7b8180769b04817f33f3a76a62205ce3 461 Pfam PF13742 OB-fold nucleic acid binding domain 24 115 5.3E-29 T 23-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 RR42_RS03475 7b8180769b04817f33f3a76a62205ce3 461 Pfam PF02601 Exonuclease VII, large subunit 139 449 1.5E-96 T 23-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 RR42_RS29260 4fb89312996e697c8e03dc2dc97c52fb 436 PANTHER PTHR11365:SF2 2 436 3.2E-192 T 23-04-2016 RR42_RS29260 4fb89312996e697c8e03dc2dc97c52fb 436 Pfam PF02538 Hydantoinase B/oxoprolinase 153 435 2.7E-111 T 23-04-2016 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 RR42_RS29260 4fb89312996e697c8e03dc2dc97c52fb 436 PANTHER PTHR11365 2 436 3.2E-192 T 23-04-2016 RR42_RS19945 b61a77806f727fe717fbb8b94b9ddc3d 346 PANTHER PTHR11019 88 338 3.8E-85 T 23-04-2016 RR42_RS19945 b61a77806f727fe717fbb8b94b9ddc3d 346 Pfam PF01965 DJ-1/PfpI family 13 191 5.6E-22 T 23-04-2016 IPR002818 DJ-1/PfpI RR42_RS19945 b61a77806f727fe717fbb8b94b9ddc3d 346 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 237 276 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RR42_RS19945 b61a77806f727fe717fbb8b94b9ddc3d 346 SUPERFAMILY SSF46689 231 280 2.11E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS19945 b61a77806f727fe717fbb8b94b9ddc3d 346 PANTHER PTHR11019:SF58 88 338 3.8E-85 T 23-04-2016 RR42_RS19945 b61a77806f727fe717fbb8b94b9ddc3d 346 Gene3D G3DSA:3.40.50.880 15 235 1.7E-53 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RR42_RS19945 b61a77806f727fe717fbb8b94b9ddc3d 346 Gene3D G3DSA:1.10.10.60 284 334 2.6E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS19945 b61a77806f727fe717fbb8b94b9ddc3d 346 Pfam PF12833 Helix-turn-helix domain 253 331 3.0E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RR42_RS19945 b61a77806f727fe717fbb8b94b9ddc3d 346 SUPERFAMILY SSF46689 283 334 1.43E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS19945 b61a77806f727fe717fbb8b94b9ddc3d 346 Gene3D G3DSA:1.10.10.60 236 283 2.8E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS19945 b61a77806f727fe717fbb8b94b9ddc3d 346 SMART SM00342 247 330 6.4E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RR42_RS19945 b61a77806f727fe717fbb8b94b9ddc3d 346 SUPERFAMILY SSF52317 12 212 1.96E-44 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RR42_RS01380 26983cf3639a9c67197318e6f26b515b 117 PANTHER PTHR37309:SF1 1 115 7.0E-30 T 23-04-2016 RR42_RS01380 26983cf3639a9c67197318e6f26b515b 117 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 1 104 7.0E-30 T 23-04-2016 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV RR42_RS01380 26983cf3639a9c67197318e6f26b515b 117 PANTHER PTHR37309 1 115 7.0E-30 T 23-04-2016 RR42_RS10085 ae86731e8866c12709071432a8403e9f 1015 SUPERFAMILY SSF56801 27 648 4.84E-101 T 23-04-2016 RR42_RS10085 ae86731e8866c12709071432a8403e9f 1015 ProSitePatterns PS00455 Putative AMP-binding domain signature. 270 281 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS10085 ae86731e8866c12709071432a8403e9f 1015 Gene3D G3DSA:3.40.50.980 97 275 3.4E-24 T 23-04-2016 RR42_RS10085 ae86731e8866c12709071432a8403e9f 1015 SMART SM00824 Thioesterase 779 1012 5.0E-4 T 23-04-2016 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 RR42_RS10085 ae86731e8866c12709071432a8403e9f 1015 SUPERFAMILY SSF47336 669 740 5.1E-14 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RR42_RS10085 ae86731e8866c12709071432a8403e9f 1015 SUPERFAMILY SSF53474 739 1010 1.28E-54 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS10085 ae86731e8866c12709071432a8403e9f 1015 ProSitePatterns PS00012 Phosphopantetheine attachment site. 698 713 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site RR42_RS10085 ae86731e8866c12709071432a8403e9f 1015 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 6 651 2.0E-178 T 23-04-2016 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16 RR42_RS10085 ae86731e8866c12709071432a8403e9f 1015 PANTHER PTHR24095 671 739 6.7E-265 T 23-04-2016 RR42_RS10085 ae86731e8866c12709071432a8403e9f 1015 PANTHER PTHR24095 10 651 6.7E-265 T 23-04-2016 RR42_RS10085 ae86731e8866c12709071432a8403e9f 1015 Pfam PF00975 Thioesterase domain 761 862 2.1E-21 T 23-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 RR42_RS10085 ae86731e8866c12709071432a8403e9f 1015 PANTHER PTHR24095:SF46 671 739 6.7E-265 T 23-04-2016 RR42_RS10085 ae86731e8866c12709071432a8403e9f 1015 PANTHER PTHR24095:SF46 10 651 6.7E-265 T 23-04-2016 RR42_RS10085 ae86731e8866c12709071432a8403e9f 1015 Gene3D G3DSA:3.40.50.980 276 430 2.3E-16 T 23-04-2016 RR42_RS10085 ae86731e8866c12709071432a8403e9f 1015 Gene3D G3DSA:3.40.50.1820 945 1013 3.2E-45 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS10085 ae86731e8866c12709071432a8403e9f 1015 Gene3D G3DSA:3.40.50.1820 746 864 3.2E-45 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS10085 ae86731e8866c12709071432a8403e9f 1015 Pfam PF00501 AMP-binding enzyme 98 523 6.9E-39 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS10085 ae86731e8866c12709071432a8403e9f 1015 Pfam PF00550 Phosphopantetheine attachment site 677 739 1.3E-8 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RR42_RS10085 ae86731e8866c12709071432a8403e9f 1015 Gene3D G3DSA:1.10.1200.10 681 742 2.3E-19 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RR42_RS10085 ae86731e8866c12709071432a8403e9f 1015 Gene3D G3DSA:3.30.300.30 520 680 4.8E-21 T 23-04-2016 RR42_RS17665 3d58c04f7cd3b486f993febea22da343 213 Pfam PF04345 Chorismate lyase 21 186 1.6E-22 T 23-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 RR42_RS17665 3d58c04f7cd3b486f993febea22da343 213 Gene3D G3DSA:3.40.1410.10 9 186 1.6E-45 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RR42_RS17665 3d58c04f7cd3b486f993febea22da343 213 SUPERFAMILY SSF64288 10 185 1.1E-41 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RR42_RS17665 3d58c04f7cd3b486f993febea22da343 213 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 9 188 25.026 T 23-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 RR42_RS17665 3d58c04f7cd3b486f993febea22da343 213 PANTHER PTHR38683 23 194 3.3E-23 T 23-04-2016 RR42_RS20065 42f9dcc8f9bb9ad8d003ab965dc26aef 126 PANTHER PTHR11715 1 122 8.0E-62 T 23-04-2016 IPR002930 Glycine cleavage system H-protein RR42_RS20065 42f9dcc8f9bb9ad8d003ab965dc26aef 126 Gene3D G3DSA:2.40.50.100 6 123 1.1E-46 T 23-04-2016 RR42_RS20065 42f9dcc8f9bb9ad8d003ab965dc26aef 126 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 48 77 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RR42_RS20065 42f9dcc8f9bb9ad8d003ab965dc26aef 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 123 1.4E-47 T 23-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 RR42_RS20065 42f9dcc8f9bb9ad8d003ab965dc26aef 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 125 29.84 T 23-04-2016 IPR002930 Glycine cleavage system H-protein RR42_RS20065 42f9dcc8f9bb9ad8d003ab965dc26aef 126 Pfam PF01597 Glycine cleavage H-protein 7 123 1.2E-43 T 23-04-2016 IPR002930 Glycine cleavage system H-protein RR42_RS20065 42f9dcc8f9bb9ad8d003ab965dc26aef 126 SUPERFAMILY SSF51230 2 124 1.7E-41 T 23-04-2016 IPR011053 Single hybrid motif RR42_RS10865 b838352833b2409ff35f5e2ac76c08a3 318 Gene3D G3DSA:3.40.190.10 177 262 3.8E-20 T 23-04-2016 RR42_RS10865 b838352833b2409ff35f5e2ac76c08a3 318 SUPERFAMILY SSF46785 2 111 7.57E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS10865 b838352833b2409ff35f5e2ac76c08a3 318 SUPERFAMILY SSF53850 88 297 2.17E-47 T 23-04-2016 RR42_RS10865 b838352833b2409ff35f5e2ac76c08a3 318 Gene3D G3DSA:1.10.10.10 3 87 4.0E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS10865 b838352833b2409ff35f5e2ac76c08a3 318 Pfam PF03466 LysR substrate binding domain 88 292 6.2E-44 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS10865 b838352833b2409ff35f5e2ac76c08a3 318 Gene3D G3DSA:3.40.190.10 92 176 8.6E-22 T 23-04-2016 RR42_RS10865 b838352833b2409ff35f5e2ac76c08a3 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.5E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS10865 b838352833b2409ff35f5e2ac76c08a3 318 PANTHER PTHR30537 1 311 2.7E-103 T 23-04-2016 RR42_RS09180 3ecf8c38d6051ac3456e669b4e4d1911 174 Gene3D G3DSA:1.10.10.10 1 135 2.1E-46 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS09180 3ecf8c38d6051ac3456e669b4e4d1911 174 SUPERFAMILY SSF46785 2 133 2.09E-38 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS09180 3ecf8c38d6051ac3456e669b4e4d1911 174 Pfam PF02082 Transcriptional regulator 1 81 9.8E-24 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type RR42_RS09180 3ecf8c38d6051ac3456e669b4e4d1911 174 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 2.3E-34 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type RR42_RS09180 3ecf8c38d6051ac3456e669b4e4d1911 174 PANTHER PTHR33221:SF4 2 132 7.7E-57 T 23-04-2016 RR42_RS09180 3ecf8c38d6051ac3456e669b4e4d1911 174 PANTHER PTHR33221 2 132 7.7E-57 T 23-04-2016 RR42_RS10825 b90f37c590bfb520c9e730363005d3d8 524 Gene3D G3DSA:3.40.190.10 171 301 1.4E-33 T 23-04-2016 RR42_RS10825 b90f37c590bfb520c9e730363005d3d8 524 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 434 4.6E-87 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain RR42_RS10825 b90f37c590bfb520c9e730363005d3d8 524 PANTHER PTHR30290 291 505 1.0E-109 T 23-04-2016 RR42_RS10825 b90f37c590bfb520c9e730363005d3d8 524 PANTHER PTHR30290 25 274 1.0E-109 T 23-04-2016 RR42_RS10825 b90f37c590bfb520c9e730363005d3d8 524 PIRSF PIRSF002741 18 519 5.0E-99 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RR42_RS10825 b90f37c590bfb520c9e730363005d3d8 524 Gene3D G3DSA:3.10.105.10 302 494 3.7E-56 T 23-04-2016 RR42_RS10825 b90f37c590bfb520c9e730363005d3d8 524 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 23-04-2016 IPR023765 Solute-binding protein family 5, conserved site RR42_RS10825 b90f37c590bfb520c9e730363005d3d8 524 SUPERFAMILY SSF53850 21 508 4.89E-126 T 23-04-2016 RR42_RS10825 b90f37c590bfb520c9e730363005d3d8 524 Gene3D G3DSA:3.90.76.10 36 170 2.4E-34 T 23-04-2016 RR42_RS20375 092f90d5421a308a865148302f078fd0 234 SUPERFAMILY SSF52172 1 123 1.1E-37 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS20375 092f90d5421a308a865148302f078fd0 234 Gene3D G3DSA:3.40.50.2300 1 121 8.8E-38 T 23-04-2016 RR42_RS20375 092f90d5421a308a865148302f078fd0 234 SMART SM00862 148 228 7.4E-22 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS20375 092f90d5421a308a865148302f078fd0 234 PANTHER PTHR26402 1 229 1.4E-73 T 23-04-2016 RR42_RS20375 092f90d5421a308a865148302f078fd0 234 Pfam PF00072 Response regulator receiver domain 3 112 1.4E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS20375 092f90d5421a308a865148302f078fd0 234 Gene3D G3DSA:1.10.10.10 126 229 1.7E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS20375 092f90d5421a308a865148302f078fd0 234 SUPERFAMILY SSF46894 127 229 4.54E-20 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS20375 092f90d5421a308a865148302f078fd0 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 228 1.0E-18 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS20375 092f90d5421a308a865148302f078fd0 234 PANTHER PTHR26402:SF578 1 229 1.4E-73 T 23-04-2016 RR42_RS20375 092f90d5421a308a865148302f078fd0 234 SMART SM00448 1 112 9.4E-35 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS13765 e24482190e637571b280393bad832cc0 576 SUPERFAMILY SSF53850 64 517 2.88E-63 T 23-04-2016 RR42_RS13765 e24482190e637571b280393bad832cc0 576 Pfam PF13416 Bacterial extracellular solute-binding protein 84 431 8.4E-13 T 23-04-2016 RR42_RS13765 e24482190e637571b280393bad832cc0 576 Gene3D G3DSA:3.40.190.10 203 443 2.8E-40 T 23-04-2016 RR42_RS13765 e24482190e637571b280393bad832cc0 576 PIRSF PIRSF035859 2 575 7.9E-302 T 23-04-2016 IPR014597 ABC transporter, periplasmic substrate-binding protein GO:0005215 RR42_RS13765 e24482190e637571b280393bad832cc0 576 PANTHER PTHR30061 84 537 3.7E-20 T 23-04-2016 RR42_RS13765 e24482190e637571b280393bad832cc0 576 Gene3D G3DSA:3.40.190.10 80 202 3.9E-15 T 23-04-2016 RR42_RS12230 59ae39b6e0c12ced13e652255e2eccf5 396 SMART SM00387 261 359 6.8E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS12230 59ae39b6e0c12ced13e652255e2eccf5 396 Gene3D G3DSA:3.30.565.10 218 358 2.6E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS12230 59ae39b6e0c12ced13e652255e2eccf5 396 Pfam PF06580 Histidine kinase 167 246 6.0E-23 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 RR42_RS12230 59ae39b6e0c12ced13e652255e2eccf5 396 SUPERFAMILY SSF55874 223 356 4.24E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS12230 59ae39b6e0c12ced13e652255e2eccf5 396 PANTHER PTHR34220 31 363 4.2E-63 T 23-04-2016 RR42_RS01060 1e174783e674b4555c68c839198e6c94 178 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 6 177 41.276 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 RR42_RS01060 1e174783e674b4555c68c839198e6c94 178 SUPERFAMILY SSF56235 3 177 1.71E-58 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RR42_RS01060 1e174783e674b4555c68c839198e6c94 178 PANTHER PTHR32194 1 178 1.9E-118 T 23-04-2016 RR42_RS01060 1e174783e674b4555c68c839198e6c94 178 PIRSF PIRSF039093 1 178 3.3E-85 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 RR42_RS01060 1e174783e674b4555c68c839198e6c94 178 Pfam PF00227 Proteasome subunit 5 176 3.3E-23 T 23-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 RR42_RS01060 1e174783e674b4555c68c839198e6c94 178 Gene3D G3DSA:3.60.20.10 7 178 2.5E-82 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RR42_RS01060 1e174783e674b4555c68c839198e6c94 178 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 7 177 1.4E-83 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 RR42_RS17960 294983a149b86f98df4f2d150ca29b2c 309 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 190 202 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RR42_RS17960 294983a149b86f98df4f2d150ca29b2c 309 PANTHER PTHR12001:SF47 1 309 1.1E-117 T 23-04-2016 RR42_RS17960 294983a149b86f98df4f2d150ca29b2c 309 Pfam PF00348 Polyprenyl synthetase 18 248 1.7E-77 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RR42_RS17960 294983a149b86f98df4f2d150ca29b2c 309 SUPERFAMILY SSF48576 3 308 1.36E-98 T 23-04-2016 IPR008949 Isoprenoid synthase domain RR42_RS17960 294983a149b86f98df4f2d150ca29b2c 309 PANTHER PTHR12001 1 309 1.1E-117 T 23-04-2016 IPR017446 Polyprenyl synthetase-related RR42_RS17960 294983a149b86f98df4f2d150ca29b2c 309 Gene3D G3DSA:1.10.600.10 2 308 1.1E-101 T 23-04-2016 IPR008949 Isoprenoid synthase domain RR42_RS17960 294983a149b86f98df4f2d150ca29b2c 309 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 68 82 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RR42_RS12800 f4ba241abf5fe0ae8160c668f48910ba 520 Gene3D G3DSA:1.10.287.950 285 490 7.6E-60 T 23-04-2016 RR42_RS12800 f4ba241abf5fe0ae8160c668f48910ba 520 SMART SM00304 212 270 0.0019 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS12800 f4ba241abf5fe0ae8160c668f48910ba 520 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 427 3.5E-57 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RR42_RS12800 f4ba241abf5fe0ae8160c668f48910ba 520 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 3.5E-57 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RR42_RS12800 f4ba241abf5fe0ae8160c668f48910ba 520 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 292 321 3.5E-57 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RR42_RS12800 f4ba241abf5fe0ae8160c668f48910ba 520 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 446 475 3.5E-57 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RR42_RS12800 f4ba241abf5fe0ae8160c668f48910ba 520 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 369 396 3.5E-57 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RR42_RS12800 f4ba241abf5fe0ae8160c668f48910ba 520 Pfam PF02203 Tar ligand binding domain homologue 1 172 1.3E-45 T 23-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RR42_RS12800 f4ba241abf5fe0ae8160c668f48910ba 520 SUPERFAMILY SSF58104 247 519 5.89E-68 T 23-04-2016 RR42_RS12800 f4ba241abf5fe0ae8160c668f48910ba 520 SUPERFAMILY SSF47170 28 147 2.33E-6 T 23-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RR42_RS12800 f4ba241abf5fe0ae8160c668f48910ba 520 PANTHER PTHR32089:SF63 182 520 1.0E-139 T 23-04-2016 RR42_RS12800 f4ba241abf5fe0ae8160c668f48910ba 520 Pfam PF00672 HAMP domain 193 266 8.0E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS12800 f4ba241abf5fe0ae8160c668f48910ba 520 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 330 517 6.3E-58 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RR42_RS12800 f4ba241abf5fe0ae8160c668f48910ba 520 PANTHER PTHR32089 182 520 1.0E-139 T 23-04-2016 RR42_RS12800 f4ba241abf5fe0ae8160c668f48910ba 520 SMART SM00283 271 518 1.1E-78 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RR42_RS09525 90670e2c439b0c1f25c36ad94ac4521b 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 385 8.1E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS09525 90670e2c439b0c1f25c36ad94ac4521b 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 423 8.1E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS09525 90670e2c439b0c1f25c36ad94ac4521b 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 442 8.1E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS09525 90670e2c439b0c1f25c36ad94ac4521b 448 Gene3D G3DSA:1.10.287.130 226 293 7.7E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS09525 90670e2c439b0c1f25c36ad94ac4521b 448 SUPERFAMILY SSF55874 299 446 6.94E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS09525 90670e2c439b0c1f25c36ad94ac4521b 448 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 293 1.3E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS09525 90670e2c439b0c1f25c36ad94ac4521b 448 Pfam PF00672 HAMP domain 164 232 1.3E-14 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS09525 90670e2c439b0c1f25c36ad94ac4521b 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 340 444 1.6E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS09525 90670e2c439b0c1f25c36ad94ac4521b 448 SUPERFAMILY SSF158472 184 232 4.71E-7 T 23-04-2016 RR42_RS09525 90670e2c439b0c1f25c36ad94ac4521b 448 PANTHER PTHR24423 1 7 3.8E-49 T 23-04-2016 RR42_RS09525 90670e2c439b0c1f25c36ad94ac4521b 448 PANTHER PTHR24423 177 446 3.8E-49 T 23-04-2016 RR42_RS09525 90670e2c439b0c1f25c36ad94ac4521b 448 SMART SM00304 183 235 7.1E-12 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS09525 90670e2c439b0c1f25c36ad94ac4521b 448 SUPERFAMILY SSF47384 221 293 3.53E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS09525 90670e2c439b0c1f25c36ad94ac4521b 448 SMART SM00387 336 445 2.5E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS09525 90670e2c439b0c1f25c36ad94ac4521b 448 Gene3D G3DSA:3.30.565.10 305 446 3.7E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS00220 cecee5961c806729b4b32b126dcdca4b 430 PIRSF PIRSF001235 18 430 2.6E-113 T 23-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 RR42_RS00220 cecee5961c806729b4b32b126dcdca4b 430 SUPERFAMILY SSF55031 228 343 1.92E-23 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS00220 cecee5961c806729b4b32b126dcdca4b 430 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 23 425 2.0E-104 T 23-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 RR42_RS00220 cecee5961c806729b4b32b126dcdca4b 430 Pfam PF01546 Peptidase family M20/M25/M40 91 424 3.6E-28 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RR42_RS00220 cecee5961c806729b4b32b126dcdca4b 430 Gene3D G3DSA:3.40.630.10 19 239 3.0E-100 T 23-04-2016 RR42_RS00220 cecee5961c806729b4b32b126dcdca4b 430 Gene3D G3DSA:3.40.630.10 370 429 3.0E-100 T 23-04-2016 RR42_RS00220 cecee5961c806729b4b32b126dcdca4b 430 PANTHER PTHR32494 19 430 1.2E-133 T 23-04-2016 RR42_RS00220 cecee5961c806729b4b32b126dcdca4b 430 SUPERFAMILY SSF53187 19 237 6.0E-79 T 23-04-2016 RR42_RS00220 cecee5961c806729b4b32b126dcdca4b 430 SUPERFAMILY SSF53187 355 429 6.0E-79 T 23-04-2016 RR42_RS00220 cecee5961c806729b4b32b126dcdca4b 430 Pfam PF07687 Peptidase dimerisation domain 226 325 2.8E-8 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS00220 cecee5961c806729b4b32b126dcdca4b 430 Gene3D G3DSA:3.30.70.360 240 333 2.0E-31 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS10850 8dd980b5fb2547c36e974bd1baf15ab4 1209 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 5 116 1.4E-5 T 23-04-2016 IPR025199 DNA translocase FtsK, 4TM region RR42_RS10850 8dd980b5fb2547c36e974bd1baf15ab4 1209 Pfam PF01580 FtsK/SpoIIIE family 828 1037 2.4E-67 T 23-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 RR42_RS10850 8dd980b5fb2547c36e974bd1baf15ab4 1209 PANTHER PTHR22683:SF41 718 1205 8.1E-253 T 23-04-2016 RR42_RS10850 8dd980b5fb2547c36e974bd1baf15ab4 1209 SMART SM00843 1142 1207 1.2E-32 T 23-04-2016 IPR018541 FtsK gamma domain RR42_RS10850 8dd980b5fb2547c36e974bd1baf15ab4 1209 SUPERFAMILY SSF46785 1144 1205 4.22E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS10850 8dd980b5fb2547c36e974bd1baf15ab4 1209 SUPERFAMILY SSF52540 813 1110 4.12E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS10850 8dd980b5fb2547c36e974bd1baf15ab4 1209 Gene3D G3DSA:3.40.50.300 801 1104 1.3E-94 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS10850 8dd980b5fb2547c36e974bd1baf15ab4 1209 SMART SM00382 863 1058 1.5E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS10850 8dd980b5fb2547c36e974bd1baf15ab4 1209 PANTHER PTHR22683 718 1205 8.1E-253 T 23-04-2016 RR42_RS10850 8dd980b5fb2547c36e974bd1baf15ab4 1209 Pfam PF09397 Ftsk gamma domain 1144 1204 7.2E-24 T 23-04-2016 IPR018541 FtsK gamma domain RR42_RS16820 be0aef07fbff5296f0acd975f8a6cb90 519 ProSitePatterns PS00455 Putative AMP-binding domain signature. 163 174 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS16820 be0aef07fbff5296f0acd975f8a6cb90 519 Gene3D G3DSA:2.30.38.10 336 407 1.9E-28 T 23-04-2016 RR42_RS16820 be0aef07fbff5296f0acd975f8a6cb90 519 Pfam PF13193 AMP-binding enzyme C-terminal domain 425 500 1.6E-18 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RR42_RS16820 be0aef07fbff5296f0acd975f8a6cb90 519 Gene3D G3DSA:3.40.50.980 169 321 6.7E-43 T 23-04-2016 RR42_RS16820 be0aef07fbff5296f0acd975f8a6cb90 519 PANTHER PTHR24096 3 508 7.8E-160 T 23-04-2016 RR42_RS16820 be0aef07fbff5296f0acd975f8a6cb90 519 SUPERFAMILY SSF56801 2 513 1.19E-149 T 23-04-2016 RR42_RS16820 be0aef07fbff5296f0acd975f8a6cb90 519 Gene3D G3DSA:3.30.300.30 411 511 8.0E-29 T 23-04-2016 RR42_RS16820 be0aef07fbff5296f0acd975f8a6cb90 519 Gene3D G3DSA:3.40.50.980 3 168 1.4E-35 T 23-04-2016 RR42_RS16820 be0aef07fbff5296f0acd975f8a6cb90 519 Pfam PF00501 AMP-binding enzyme 8 416 4.6E-100 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS12985 7a92e5f2e18b633b2af098d411b7e3d3 383 Gene3D G3DSA:3.30.565.10 226 382 1.9E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS12985 7a92e5f2e18b633b2af098d411b7e3d3 383 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 265 382 1.7E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS12985 7a92e5f2e18b633b2af098d411b7e3d3 383 Gene3D G3DSA:3.30.450.20 39 127 1.9E-10 T 23-04-2016 RR42_RS12985 7a92e5f2e18b633b2af098d411b7e3d3 383 Pfam PF00512 His Kinase A (phospho-acceptor) domain 161 220 3.3E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS12985 7a92e5f2e18b633b2af098d411b7e3d3 383 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 330 3.9E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS12985 7a92e5f2e18b633b2af098d411b7e3d3 383 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 363 3.9E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS12985 7a92e5f2e18b633b2af098d411b7e3d3 383 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 344 3.9E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS12985 7a92e5f2e18b633b2af098d411b7e3d3 383 SMART SM00388 159 224 2.9E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS12985 7a92e5f2e18b633b2af098d411b7e3d3 383 SUPERFAMILY SSF55874 228 381 7.73E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS12985 7a92e5f2e18b633b2af098d411b7e3d3 383 Gene3D G3DSA:1.10.287.130 151 217 3.5E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS12985 7a92e5f2e18b633b2af098d411b7e3d3 383 PANTHER PTHR24423:SF488 39 382 8.4E-85 T 23-04-2016 RR42_RS12985 7a92e5f2e18b633b2af098d411b7e3d3 383 SMART SM00387 264 383 5.0E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS12985 7a92e5f2e18b633b2af098d411b7e3d3 383 SUPERFAMILY SSF47384 151 220 3.73E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS12985 7a92e5f2e18b633b2af098d411b7e3d3 383 PANTHER PTHR24423 39 382 8.4E-85 T 23-04-2016 RR42_RS10830 40c6875d6c2ce8856b5349d020b93a97 432 PANTHER PTHR10824 1 421 4.9E-67 T 23-04-2016 RR42_RS10830 40c6875d6c2ce8856b5349d020b93a97 432 Pfam PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal 197 426 1.9E-55 T 23-04-2016 IPR014940 BAAT/Acyl-CoA thioester hydrolase C-terminal RR42_RS10830 40c6875d6c2ce8856b5349d020b93a97 432 SUPERFAMILY SSF53474 63 291 1.79E-31 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS10830 40c6875d6c2ce8856b5349d020b93a97 432 SUPERFAMILY SSF53474 411 423 1.79E-31 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS10830 40c6875d6c2ce8856b5349d020b93a97 432 SUPERFAMILY SSF53474 324 382 1.79E-31 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS10830 40c6875d6c2ce8856b5349d020b93a97 432 PIRSF PIRSF016521 1 432 2.6E-104 T 23-04-2016 IPR016662 Acyl-CoA thioesterase, long chain GO:0006637|GO:0016790 RR42_RS10830 40c6875d6c2ce8856b5349d020b93a97 432 Pfam PF04775 Acyl-CoA thioester hydrolase/BAAT N-terminal region 14 134 3.9E-32 T 23-04-2016 IPR006862 Acyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferase RR42_RS10830 40c6875d6c2ce8856b5349d020b93a97 432 Gene3D G3DSA:3.40.50.1820 136 254 6.7E-26 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS10830 40c6875d6c2ce8856b5349d020b93a97 432 Gene3D G3DSA:3.40.50.1820 298 423 6.7E-26 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS10830 40c6875d6c2ce8856b5349d020b93a97 432 PANTHER PTHR10824:SF4 1 421 4.9E-67 T 23-04-2016 RR42_RS00500 c0f6cde8bc28413c8016f06d2e22fa88 231 Gene3D G3DSA:3.40.50.2300 7 129 2.0E-36 T 23-04-2016 RR42_RS00500 c0f6cde8bc28413c8016f06d2e22fa88 231 SMART SM00862 153 229 7.6E-24 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS00500 c0f6cde8bc28413c8016f06d2e22fa88 231 SMART SM00448 7 117 8.5E-38 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS00500 c0f6cde8bc28413c8016f06d2e22fa88 231 Pfam PF00072 Response regulator receiver domain 9 118 2.6E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS00500 c0f6cde8bc28413c8016f06d2e22fa88 231 SUPERFAMILY SSF52172 7 188 8.2E-39 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS00500 c0f6cde8bc28413c8016f06d2e22fa88 231 PANTHER PTHR26402 7 229 9.3E-99 T 23-04-2016 RR42_RS00500 c0f6cde8bc28413c8016f06d2e22fa88 231 Gene3D G3DSA:1.10.10.10 131 230 6.0E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS00500 c0f6cde8bc28413c8016f06d2e22fa88 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 229 8.8E-22 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS00500 c0f6cde8bc28413c8016f06d2e22fa88 231 PANTHER PTHR26402:SF399 7 229 9.3E-99 T 23-04-2016 RR42_RS05600 f43d51f6a22e86fa27c3f89d0f858518 372 SUPERFAMILY SSF47203 219 363 2.42E-34 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS05600 f43d51f6a22e86fa27c3f89d0f858518 372 PANTHER PTHR10909:SF341 1 356 6.5E-72 T 23-04-2016 RR42_RS05600 f43d51f6a22e86fa27c3f89d0f858518 372 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 119 206 6.3E-9 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RR42_RS05600 f43d51f6a22e86fa27c3f89d0f858518 372 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 97 1.2E-10 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS05600 f43d51f6a22e86fa27c3f89d0f858518 372 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 221 349 1.8E-23 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS05600 f43d51f6a22e86fa27c3f89d0f858518 372 PANTHER PTHR10909 1 356 6.5E-72 T 23-04-2016 RR42_RS05600 f43d51f6a22e86fa27c3f89d0f858518 372 Gene3D G3DSA:2.40.110.10 118 203 6.8E-10 T 23-04-2016 RR42_RS05600 f43d51f6a22e86fa27c3f89d0f858518 372 Gene3D G3DSA:1.20.140.10 204 360 1.5E-33 T 23-04-2016 RR42_RS05600 f43d51f6a22e86fa27c3f89d0f858518 372 SUPERFAMILY SSF56645 1 210 2.36E-36 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RR42_RS05600 f43d51f6a22e86fa27c3f89d0f858518 372 Gene3D G3DSA:1.10.540.10 1 100 6.0E-14 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS14640 ca9e80f8571794f89ce0865240a29c68 510 PANTHER PTHR10362 6 496 2.7E-251 T 23-04-2016 RR42_RS14640 ca9e80f8571794f89ce0865240a29c68 510 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 23-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 RR42_RS14640 ca9e80f8571794f89ce0865240a29c68 510 Pfam PF00221 Aromatic amino acid lyase 11 470 4.2E-186 T 23-04-2016 IPR001106 Aromatic amino acid lyase RR42_RS14640 ca9e80f8571794f89ce0865240a29c68 510 SUPERFAMILY SSF48557 5 506 6.04E-191 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 RR42_RS14640 ca9e80f8571794f89ce0865240a29c68 510 Gene3D G3DSA:1.10.275.10 3 197 6.7E-75 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal RR42_RS14640 ca9e80f8571794f89ce0865240a29c68 510 Gene3D G3DSA:1.20.200.10 198 502 8.3E-128 T 23-04-2016 RR42_RS14640 ca9e80f8571794f89ce0865240a29c68 510 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 508 1.7E-222 T 23-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RR42_RS14640 ca9e80f8571794f89ce0865240a29c68 510 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 45.025 T 23-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RR42_RS18105 ef2c54ddefea26b92950819f131aa58f 599 PANTHER PTHR30627 22 599 1.9E-206 T 23-04-2016 RR42_RS18105 ef2c54ddefea26b92950819f131aa58f 599 Pfam PF00905 Penicillin binding protein transpeptidase domain 271 564 3.5E-66 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RR42_RS18105 ef2c54ddefea26b92950819f131aa58f 599 PANTHER PTHR30627:SF1 22 599 1.9E-206 T 23-04-2016 RR42_RS18105 ef2c54ddefea26b92950819f131aa58f 599 Pfam PF03717 Penicillin-binding Protein dimerisation domain 81 229 1.4E-20 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RR42_RS18105 ef2c54ddefea26b92950819f131aa58f 599 Gene3D G3DSA:3.40.710.10 252 575 1.8E-77 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS18105 ef2c54ddefea26b92950819f131aa58f 599 SUPERFAMILY SSF56601 245 574 6.63E-84 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS18105 ef2c54ddefea26b92950819f131aa58f 599 SUPERFAMILY SSF56519 77 241 4.97E-44 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RR42_RS18105 ef2c54ddefea26b92950819f131aa58f 599 Gene3D G3DSA:3.90.1310.10 152 251 1.1E-27 T 23-04-2016 RR42_RS26000 f14d01e414dba405502c5e9659e4b7da 253 SUPERFAMILY SSF51556 73 252 1.87E-39 T 23-04-2016 IPR032466 Metal-dependent hydrolase RR42_RS26000 f14d01e414dba405502c5e9659e4b7da 253 Gene3D G3DSA:3.20.20.140 75 252 2.6E-49 T 23-04-2016 RR42_RS26000 f14d01e414dba405502c5e9659e4b7da 253 PANTHER PTHR11409:SF41 65 253 5.8E-87 T 23-04-2016 RR42_RS26000 f14d01e414dba405502c5e9659e4b7da 253 Pfam PF00962 Adenosine/AMP deaminase 78 252 1.5E-26 T 23-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 RR42_RS26000 f14d01e414dba405502c5e9659e4b7da 253 PANTHER PTHR11409 65 253 5.8E-87 T 23-04-2016 RR42_RS04235 5457bf743f1ffc5a551ba0edf9f9b5cc 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 275 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RR42_RS04235 5457bf743f1ffc5a551ba0edf9f9b5cc 429 Gene3D G3DSA:3.90.1150.10 2 69 6.9E-41 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS04235 5457bf743f1ffc5a551ba0edf9f9b5cc 429 Gene3D G3DSA:3.90.1150.10 324 427 6.9E-41 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS04235 5457bf743f1ffc5a551ba0edf9f9b5cc 429 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 429 100.678 T 23-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 RR42_RS04235 5457bf743f1ffc5a551ba0edf9f9b5cc 429 Gene3D G3DSA:3.40.640.10 70 321 8.0E-79 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS04235 5457bf743f1ffc5a551ba0edf9f9b5cc 429 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 427 1.4E-181 T 23-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 RR42_RS04235 5457bf743f1ffc5a551ba0edf9f9b5cc 429 Pfam PF00202 Aminotransferase class-III 32 401 1.8E-78 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RR42_RS04235 5457bf743f1ffc5a551ba0edf9f9b5cc 429 PANTHER PTHR11986:SF5 1 427 3.7E-209 T 23-04-2016 RR42_RS04235 5457bf743f1ffc5a551ba0edf9f9b5cc 429 SUPERFAMILY SSF53383 2 427 6.12E-127 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS04235 5457bf743f1ffc5a551ba0edf9f9b5cc 429 PANTHER PTHR11986 1 427 3.7E-209 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RR42_RS14385 156ca2d34f31c1ae177d87dc68598cf7 355 SMART SM01329 2 351 2.6E-201 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RR42_RS14385 156ca2d34f31c1ae177d87dc68598cf7 355 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 242 261 - T 23-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RR42_RS14385 156ca2d34f31c1ae177d87dc68598cf7 355 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 1 355 50.238 T 23-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 RR42_RS14385 156ca2d34f31c1ae177d87dc68598cf7 355 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 2 351 1.9E-129 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RR42_RS14385 156ca2d34f31c1ae177d87dc68598cf7 355 PANTHER PTHR11835:SF35 1 355 5.8E-193 T 23-04-2016 RR42_RS14385 156ca2d34f31c1ae177d87dc68598cf7 355 PANTHER PTHR11835 1 355 5.8E-193 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RR42_RS14385 156ca2d34f31c1ae177d87dc68598cf7 355 Gene3D G3DSA:3.40.718.10 2 355 4.2E-125 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RR42_RS14385 156ca2d34f31c1ae177d87dc68598cf7 355 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 2 349 1.5E-146 T 23-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 RR42_RS14385 156ca2d34f31c1ae177d87dc68598cf7 355 SUPERFAMILY SSF53659 2 355 8.46E-119 T 23-04-2016 RR42_RS13680 3f20f17475fa579e0adc997318e2728c 276 SUPERFAMILY SSF46785 16 89 1.32E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS13680 3f20f17475fa579e0adc997318e2728c 276 PANTHER PTHR30136:SF10 7 272 1.2E-94 T 23-04-2016 RR42_RS13680 3f20f17475fa579e0adc997318e2728c 276 SMART SM00346 16 106 7.8E-25 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RR42_RS13680 3f20f17475fa579e0adc997318e2728c 276 Pfam PF01614 Bacterial transcriptional regulator 136 258 7.1E-24 T 23-04-2016 IPR014757 Transcription regulator IclR, C-terminal RR42_RS13680 3f20f17475fa579e0adc997318e2728c 276 SUPERFAMILY SSF55781 82 263 2.09E-44 T 23-04-2016 IPR029016 GAF domain-like RR42_RS13680 3f20f17475fa579e0adc997318e2728c 276 Gene3D G3DSA:3.30.450.40 86 266 1.2E-49 T 23-04-2016 IPR029016 GAF domain-like RR42_RS13680 3f20f17475fa579e0adc997318e2728c 276 Pfam PF09339 IclR helix-turn-helix domain 19 68 1.1E-14 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RR42_RS13680 3f20f17475fa579e0adc997318e2728c 276 Gene3D G3DSA:1.10.10.10 9 85 3.9E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS13680 3f20f17475fa579e0adc997318e2728c 276 PANTHER PTHR30136 7 272 1.2E-94 T 23-04-2016 RR42_RS04530 dd4cc58a84aff84090bb636e83675680 438 PANTHER PTHR11119 12 425 2.1E-176 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RR42_RS04530 dd4cc58a84aff84090bb636e83675680 438 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 348 368 - T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 RR42_RS04530 dd4cc58a84aff84090bb636e83675680 438 PANTHER PTHR11119:SF49 12 425 2.1E-176 T 23-04-2016 RR42_RS04530 dd4cc58a84aff84090bb636e83675680 438 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 26 421 2.3E-99 T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 RR42_RS04530 dd4cc58a84aff84090bb636e83675680 438 Pfam PF00860 Permease family 30 401 1.3E-86 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RR42_RS19130 46fee01d10aead5087b5da2ef68b4865 207 SMART SM01390 3 96 3.8E-46 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 RR42_RS19130 46fee01d10aead5087b5da2ef68b4865 207 ProSitePatterns PS00632 Ribosomal protein S4 signature. 95 119 - T 23-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 RR42_RS19130 46fee01d10aead5087b5da2ef68b4865 207 Gene3D G3DSA:1.10.1050.10 2 99 2.3E-41 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 RR42_RS19130 46fee01d10aead5087b5da2ef68b4865 207 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 207 35.128 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 RR42_RS19130 46fee01d10aead5087b5da2ef68b4865 207 PANTHER PTHR11831:SF4 1 207 9.8E-88 T 23-04-2016 RR42_RS19130 46fee01d10aead5087b5da2ef68b4865 207 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 96 9.9E-31 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 RR42_RS19130 46fee01d10aead5087b5da2ef68b4865 207 SUPERFAMILY SSF55174 2 207 1.44E-66 T 23-04-2016 RR42_RS19130 46fee01d10aead5087b5da2ef68b4865 207 PANTHER PTHR11831 1 207 9.8E-88 T 23-04-2016 IPR022801 Ribosomal protein S4/S9 RR42_RS19130 46fee01d10aead5087b5da2ef68b4865 207 Gene3D G3DSA:3.10.290.10 100 198 2.7E-32 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RR42_RS19130 46fee01d10aead5087b5da2ef68b4865 207 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 207 5.5E-79 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 RR42_RS19130 46fee01d10aead5087b5da2ef68b4865 207 SMART SM00363 97 161 2.9E-15 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RR42_RS19130 46fee01d10aead5087b5da2ef68b4865 207 Pfam PF01479 S4 domain 98 144 3.5E-16 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RR42_RS11155 b1aacffda82116337959ef85e4d0ecf6 541 SUPERFAMILY SSF56801 7 536 6.15E-131 T 23-04-2016 RR42_RS11155 b1aacffda82116337959ef85e4d0ecf6 541 Gene3D G3DSA:3.40.50.980 192 339 4.6E-31 T 23-04-2016 RR42_RS11155 b1aacffda82116337959ef85e4d0ecf6 541 Gene3D G3DSA:2.30.38.10 360 433 8.9E-18 T 23-04-2016 RR42_RS11155 b1aacffda82116337959ef85e4d0ecf6 541 PANTHER PTHR24096 3 537 5.1E-245 T 23-04-2016 RR42_RS11155 b1aacffda82116337959ef85e4d0ecf6 541 Pfam PF13193 AMP-binding enzyme C-terminal domain 449 523 1.1E-11 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RR42_RS11155 b1aacffda82116337959ef85e4d0ecf6 541 Pfam PF00501 AMP-binding enzyme 21 439 7.6E-83 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS11155 b1aacffda82116337959ef85e4d0ecf6 541 ProSitePatterns PS00455 Putative AMP-binding domain signature. 184 195 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS11155 b1aacffda82116337959ef85e4d0ecf6 541 Gene3D G3DSA:3.30.300.30 434 532 1.3E-23 T 23-04-2016 RR42_RS11155 b1aacffda82116337959ef85e4d0ecf6 541 PANTHER PTHR24096:SF53 3 537 5.1E-245 T 23-04-2016 RR42_RS11155 b1aacffda82116337959ef85e4d0ecf6 541 Gene3D G3DSA:3.40.50.980 14 191 2.7E-28 T 23-04-2016 RR42_RS17170 10d94f7da4a3d21381bb1f7c5a39471c 409 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 405 51.144 T 23-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RR42_RS17170 10d94f7da4a3d21381bb1f7c5a39471c 409 PANTHER PTHR11587:SF2 1 409 1.9E-224 T 23-04-2016 RR42_RS17170 10d94f7da4a3d21381bb1f7c5a39471c 409 SUPERFAMILY SSF52402 5 169 1.41E-45 T 23-04-2016 RR42_RS17170 10d94f7da4a3d21381bb1f7c5a39471c 409 Gene3D G3DSA:3.40.50.620 5 163 4.1E-64 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS17170 10d94f7da4a3d21381bb1f7c5a39471c 409 Pfam PF00764 Arginosuccinate synthase 8 400 1.8E-150 T 23-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RR42_RS17170 10d94f7da4a3d21381bb1f7c5a39471c 409 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 401 4.8E-141 T 23-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RR42_RS17170 10d94f7da4a3d21381bb1f7c5a39471c 409 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 23-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RR42_RS17170 10d94f7da4a3d21381bb1f7c5a39471c 409 PANTHER PTHR11587 1 409 1.9E-224 T 23-04-2016 RR42_RS17170 10d94f7da4a3d21381bb1f7c5a39471c 409 SUPERFAMILY SSF69864 180 403 1.44E-91 T 23-04-2016 RR42_RS17170 10d94f7da4a3d21381bb1f7c5a39471c 409 Gene3D G3DSA:1.20.5.470 372 404 9.8E-7 T 23-04-2016 RR42_RS17170 10d94f7da4a3d21381bb1f7c5a39471c 409 Gene3D G3DSA:3.90.1260.10 164 362 8.6E-93 T 23-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RR42_RS17170 10d94f7da4a3d21381bb1f7c5a39471c 409 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 120 131 - T 23-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RR42_RS01580 28fb190f95bcd6f152ac3463cc15f885 505 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 13 489 2.0E-215 T 23-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 RR42_RS01580 28fb190f95bcd6f152ac3463cc15f885 505 Pfam PF00171 Aldehyde dehydrogenase family 24 485 4.3E-147 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RR42_RS01580 28fb190f95bcd6f152ac3463cc15f885 505 Gene3D G3DSA:3.40.309.10 269 450 7.3E-69 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RR42_RS01580 28fb190f95bcd6f152ac3463cc15f885 505 PANTHER PTHR11699 1 493 2.1E-290 T 23-04-2016 RR42_RS01580 28fb190f95bcd6f152ac3463cc15f885 505 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RR42_RS01580 28fb190f95bcd6f152ac3463cc15f885 505 PANTHER PTHR11699:SF188 1 493 2.1E-290 T 23-04-2016 RR42_RS01580 28fb190f95bcd6f152ac3463cc15f885 505 SUPERFAMILY SSF53720 10 490 2.49E-155 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RR42_RS01580 28fb190f95bcd6f152ac3463cc15f885 505 Gene3D G3DSA:3.40.605.10 12 268 1.2E-91 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RR42_RS05850 dfe78e90fa2d168d40cf1b336e4c8d51 115 PANTHER PTHR33751:SF3 24 106 6.2E-17 T 23-04-2016 RR42_RS05850 dfe78e90fa2d168d40cf1b336e4c8d51 115 SUPERFAMILY SSF46626 5 105 3.34E-20 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS05850 dfe78e90fa2d168d40cf1b336e4c8d51 115 Gene3D G3DSA:1.10.760.10 25 105 4.3E-24 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS05850 dfe78e90fa2d168d40cf1b336e4c8d51 115 Pfam PF00034 Cytochrome c 35 104 2.3E-4 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS05850 dfe78e90fa2d168d40cf1b336e4c8d51 115 PANTHER PTHR33751 24 106 6.2E-17 T 23-04-2016 RR42_RS07835 c2fb197a363711fa31b040059c1bfa7b 434 Gene3D G3DSA:1.20.1250.20 245 422 3.3E-26 T 23-04-2016 RR42_RS07835 c2fb197a363711fa31b040059c1bfa7b 434 Gene3D G3DSA:1.20.1250.20 27 229 5.2E-23 T 23-04-2016 RR42_RS07835 c2fb197a363711fa31b040059c1bfa7b 434 PANTHER PTHR23508 27 423 1.4E-139 T 23-04-2016 RR42_RS07835 c2fb197a363711fa31b040059c1bfa7b 434 SUPERFAMILY SSF103473 23 423 3.4E-65 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS07835 c2fb197a363711fa31b040059c1bfa7b 434 Pfam PF07690 Major Facilitator Superfamily 288 423 7.2E-10 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS07835 c2fb197a363711fa31b040059c1bfa7b 434 PANTHER PTHR23508:SF11 27 423 1.4E-139 T 23-04-2016 RR42_RS07835 c2fb197a363711fa31b040059c1bfa7b 434 Pfam PF00083 Sugar (and other) transporter 30 234 8.4E-21 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RR42_RS36355 ee4c1982431efbe020fe66bcc704e6bb 77 SUPERFAMILY SSF55347 3 68 1.08E-8 T 23-04-2016 RR42_RS36355 ee4c1982431efbe020fe66bcc704e6bb 77 Gene3D G3DSA:3.30.360.10 3 70 1.0E-9 T 23-04-2016 RR42_RS08930 df02e407620c454f8d66271295371b6e 247 Pfam PF02665 Nitrate reductase gamma subunit 6 227 1.0E-81 T 23-04-2016 IPR023234 NarG-like domain RR42_RS08930 df02e407620c454f8d66271295371b6e 247 SUPERFAMILY SSF103501 5 227 1.83E-66 T 23-04-2016 IPR023234 NarG-like domain RR42_RS08930 df02e407620c454f8d66271295371b6e 247 PANTHER PTHR30598 5 246 4.1E-90 T 23-04-2016 RR42_RS08930 df02e407620c454f8d66271295371b6e 247 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 5 228 1.9E-84 T 23-04-2016 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 RR42_RS08930 df02e407620c454f8d66271295371b6e 247 PANTHER PTHR30598:SF4 5 246 4.1E-90 T 23-04-2016 RR42_RS08930 df02e407620c454f8d66271295371b6e 247 Gene3D G3DSA:1.20.950.20 4 214 1.1E-64 T 23-04-2016 RR42_RS14400 f4ea6110a964483424bb4021e8d5420e 469 Gene3D G3DSA:3.30.499.10 7 157 3.2E-20 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14400 f4ea6110a964483424bb4021e8d5420e 469 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 467 6.6E-240 T 23-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14400 f4ea6110a964483424bb4021e8d5420e 469 Gene3D G3DSA:3.40.1060.10 167 279 3.3E-40 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14400 f4ea6110a964483424bb4021e8d5420e 469 Pfam PF00330 Aconitase family (aconitate hydratase) 7 460 2.3E-155 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14400 f4ea6110a964483424bb4021e8d5420e 469 PRINTS PR00415 Aconitase family signature 209 222 1.7E-48 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14400 f4ea6110a964483424bb4021e8d5420e 469 PRINTS PR00415 Aconitase family signature 82 95 1.7E-48 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14400 f4ea6110a964483424bb4021e8d5420e 469 PRINTS PR00415 Aconitase family signature 195 208 1.7E-48 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14400 f4ea6110a964483424bb4021e8d5420e 469 PRINTS PR00415 Aconitase family signature 119 132 1.7E-48 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14400 f4ea6110a964483424bb4021e8d5420e 469 PRINTS PR00415 Aconitase family signature 343 354 1.7E-48 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14400 f4ea6110a964483424bb4021e8d5420e 469 PRINTS PR00415 Aconitase family signature 286 300 1.7E-48 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14400 f4ea6110a964483424bb4021e8d5420e 469 PRINTS PR00415 Aconitase family signature 133 148 1.7E-48 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14400 f4ea6110a964483424bb4021e8d5420e 469 PRINTS PR00415 Aconitase family signature 108 116 1.7E-48 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14400 f4ea6110a964483424bb4021e8d5420e 469 PRINTS PR00415 Aconitase family signature 402 415 1.7E-48 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14400 f4ea6110a964483424bb4021e8d5420e 469 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 469 60.715 T 23-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14400 f4ea6110a964483424bb4021e8d5420e 469 PANTHER PTHR11670 1 307 6.0E-294 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14400 f4ea6110a964483424bb4021e8d5420e 469 PANTHER PTHR11670 327 468 6.0E-294 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14400 f4ea6110a964483424bb4021e8d5420e 469 ProSitePatterns PS01244 Aconitase family signature 2. 402 415 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14400 f4ea6110a964483424bb4021e8d5420e 469 Gene3D G3DSA:3.30.499.10 293 303 5.3E-61 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14400 f4ea6110a964483424bb4021e8d5420e 469 Gene3D G3DSA:3.30.499.10 335 468 5.3E-61 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14400 f4ea6110a964483424bb4021e8d5420e 469 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14400 f4ea6110a964483424bb4021e8d5420e 469 PANTHER PTHR11670:SF38 1 307 6.0E-294 T 23-04-2016 RR42_RS14400 f4ea6110a964483424bb4021e8d5420e 469 PANTHER PTHR11670:SF38 327 468 6.0E-294 T 23-04-2016 RR42_RS14400 f4ea6110a964483424bb4021e8d5420e 469 SUPERFAMILY SSF53732 2 468 3.27E-164 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS09290 11a37df3de4ed1e8d0a3ae6c7780646d 66 Gene3D G3DSA:2.20.28.10 13 65 3.6E-26 T 23-04-2016 IPR004039 Rubredoxin-type fold RR42_RS09290 11a37df3de4ed1e8d0a3ae6c7780646d 66 ProSitePatterns PS00202 Rubredoxin signature. 45 55 - T 23-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 RR42_RS09290 11a37df3de4ed1e8d0a3ae6c7780646d 66 PRINTS PR00163 Rubredoxin signature 45 61 4.2E-9 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 RR42_RS09290 11a37df3de4ed1e8d0a3ae6c7780646d 66 PRINTS PR00163 Rubredoxin signature 15 31 4.2E-9 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 RR42_RS09290 11a37df3de4ed1e8d0a3ae6c7780646d 66 Pfam PF00301 Rubredoxin 15 61 6.5E-24 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 RR42_RS09290 11a37df3de4ed1e8d0a3ae6c7780646d 66 SUPERFAMILY SSF57802 13 65 2.19E-23 T 23-04-2016 RR42_RS03925 1d2f4ab3e4e915c6b24b4575692a016f 402 Gene3D G3DSA:3.50.50.60 11 109 3.6E-18 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS03925 1d2f4ab3e4e915c6b24b4575692a016f 402 PANTHER PTHR22912 10 378 2.4E-99 T 23-04-2016 RR42_RS03925 1d2f4ab3e4e915c6b24b4575692a016f 402 SUPERFAMILY SSF51905 10 193 1.86E-31 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS03925 1d2f4ab3e4e915c6b24b4575692a016f 402 SUPERFAMILY SSF51971 142 309 7.18E-27 T 23-04-2016 RR42_RS03925 1d2f4ab3e4e915c6b24b4575692a016f 402 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 289 9.7E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS03925 1d2f4ab3e4e915c6b24b4575692a016f 402 PANTHER PTHR22912:SF130 10 378 2.4E-99 T 23-04-2016 RR42_RS03925 1d2f4ab3e4e915c6b24b4575692a016f 402 Gene3D G3DSA:3.50.50.60 110 309 2.4E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS03925 1d2f4ab3e4e915c6b24b4575692a016f 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 151 169 2.0E-20 T 23-04-2016 RR42_RS03925 1d2f4ab3e4e915c6b24b4575692a016f 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 2.0E-20 T 23-04-2016 RR42_RS03925 1d2f4ab3e4e915c6b24b4575692a016f 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.0E-20 T 23-04-2016 RR42_RS03925 1d2f4ab3e4e915c6b24b4575692a016f 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 2.0E-20 T 23-04-2016 RR42_RS03925 1d2f4ab3e4e915c6b24b4575692a016f 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 2.0E-20 T 23-04-2016 RR42_RS03925 1d2f4ab3e4e915c6b24b4575692a016f 402 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 2.7E-13 T 23-04-2016 RR42_RS03925 1d2f4ab3e4e915c6b24b4575692a016f 402 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 2.7E-13 T 23-04-2016 RR42_RS03925 1d2f4ab3e4e915c6b24b4575692a016f 402 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 151 176 2.7E-13 T 23-04-2016 RR42_RS03925 1d2f4ab3e4e915c6b24b4575692a016f 402 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 237 251 2.7E-13 T 23-04-2016 RR42_RS03130 3038472ee9ceb484fd7a9e0773755797 138 SUPERFAMILY SSF103088 27 126 1.03E-5 T 23-04-2016 IPR006665 OmpA-like domain RR42_RS16850 3553d06df5fbaa98c49d5c63a0555e4c 301 Pfam PF00498 FHA domain 217 263 4.4E-9 T 23-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RR42_RS16850 3553d06df5fbaa98c49d5c63a0555e4c 301 Gene3D G3DSA:3.30.70.1230 4 182 2.5E-29 T 23-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 RR42_RS16850 3553d06df5fbaa98c49d5c63a0555e4c 301 Gene3D G3DSA:2.60.200.20 213 288 1.8E-12 T 23-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RR42_RS16850 3553d06df5fbaa98c49d5c63a0555e4c 301 SMART SM00044 1 163 4.5E-4 T 23-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 RR42_RS16850 3553d06df5fbaa98c49d5c63a0555e4c 301 SUPERFAMILY SSF49879 213 288 1.11E-14 T 23-04-2016 IPR008984 SMAD/FHA domain GO:0005515 RR42_RS16850 3553d06df5fbaa98c49d5c63a0555e4c 301 PANTHER PTHR11920 251 268 3.3E-16 T 23-04-2016 RR42_RS16850 3553d06df5fbaa98c49d5c63a0555e4c 301 PANTHER PTHR11920 15 181 3.3E-16 T 23-04-2016 RR42_RS16850 3553d06df5fbaa98c49d5c63a0555e4c 301 SUPERFAMILY SSF55073 6 182 6.28E-42 T 23-04-2016 IPR029787 Nucleotide cyclase RR42_RS16850 3553d06df5fbaa98c49d5c63a0555e4c 301 PANTHER PTHR11920:SF341 251 268 3.3E-16 T 23-04-2016 RR42_RS16850 3553d06df5fbaa98c49d5c63a0555e4c 301 PANTHER PTHR11920:SF341 15 181 3.3E-16 T 23-04-2016 RR42_RS16850 3553d06df5fbaa98c49d5c63a0555e4c 301 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 10 169 3.4E-20 T 23-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 RR42_RS00975 fc6d0d4f96302ab5643570f9e8504c1e 310 Pfam PF00753 Metallo-beta-lactamase superfamily 19 207 2.6E-26 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS00975 fc6d0d4f96302ab5643570f9e8504c1e 310 SMART SM00849 23 207 4.5E-27 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS00975 fc6d0d4f96302ab5643570f9e8504c1e 310 Gene3D G3DSA:3.60.15.10 12 229 2.3E-44 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS00975 fc6d0d4f96302ab5643570f9e8504c1e 310 PANTHER PTHR11935 12 220 1.2E-32 T 23-04-2016 RR42_RS00975 fc6d0d4f96302ab5643570f9e8504c1e 310 SUPERFAMILY SSF56281 14 228 1.49E-47 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS15195 5630064c391810793e1b1159bef9f8c8 541 Pfam PF01019 Gamma-glutamyltranspeptidase 36 536 2.3E-155 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RR42_RS15195 5630064c391810793e1b1159bef9f8c8 541 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 22 520 1.7E-109 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RR42_RS15195 5630064c391810793e1b1159bef9f8c8 541 SUPERFAMILY SSF56235 6 541 1.23E-176 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RR42_RS15195 5630064c391810793e1b1159bef9f8c8 541 PANTHER PTHR11686:SF8 9 541 3.7E-230 T 23-04-2016 RR42_RS15195 5630064c391810793e1b1159bef9f8c8 541 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 357 375 7.7E-43 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RR42_RS15195 5630064c391810793e1b1159bef9f8c8 541 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 263 282 7.7E-43 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RR42_RS15195 5630064c391810793e1b1159bef9f8c8 541 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 234 250 7.7E-43 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RR42_RS15195 5630064c391810793e1b1159bef9f8c8 541 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 43 68 7.7E-43 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RR42_RS15195 5630064c391810793e1b1159bef9f8c8 541 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 436 453 7.7E-43 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RR42_RS15195 5630064c391810793e1b1159bef9f8c8 541 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 118 136 7.7E-43 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RR42_RS15195 5630064c391810793e1b1159bef9f8c8 541 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 412 427 7.7E-43 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RR42_RS15195 5630064c391810793e1b1159bef9f8c8 541 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 381 399 7.7E-43 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RR42_RS15195 5630064c391810793e1b1159bef9f8c8 541 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 136 155 7.7E-43 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RR42_RS15195 5630064c391810793e1b1159bef9f8c8 541 PANTHER PTHR11686 9 541 3.7E-230 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RR42_RS19205 cda992b582b249284a777536eb002460 122 SUPERFAMILY SSF50193 1 122 1.44E-49 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RR42_RS19205 cda992b582b249284a777536eb002460 122 PANTHER PTHR11761:SF3 1 122 4.2E-71 T 23-04-2016 RR42_RS19205 cda992b582b249284a777536eb002460 122 PANTHER PTHR11761 1 122 4.2E-71 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RR42_RS19205 cda992b582b249284a777536eb002460 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 9.2E-57 T 23-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 RR42_RS19205 cda992b582b249284a777536eb002460 122 Gene3D G3DSA:2.40.150.20 1 122 6.3E-54 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RR42_RS19205 cda992b582b249284a777536eb002460 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.803 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RR42_RS19205 cda992b582b249284a777536eb002460 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 2.5E-53 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RR42_RS19205 cda992b582b249284a777536eb002460 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 23-04-2016 IPR019972 Ribosomal protein L14P, conserved site RR42_RS19205 cda992b582b249284a777536eb002460 122 SMART SM01374 1 122 2.2E-83 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RR42_RS07895 6db9fe5ec30c14a416873b5ebffc0547 298 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 17 269 1.2E-44 T 23-04-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region RR42_RS07895 6db9fe5ec30c14a416873b5ebffc0547 298 SUPERFAMILY SSF63829 7 286 2.62E-54 T 23-04-2016 RR42_RS07895 6db9fe5ec30c14a416873b5ebffc0547 298 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 210 227 3.5E-5 T 23-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) RR42_RS07895 6db9fe5ec30c14a416873b5ebffc0547 298 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 90 111 3.5E-5 T 23-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) RR42_RS07895 6db9fe5ec30c14a416873b5ebffc0547 298 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 251 269 3.5E-5 T 23-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) RR42_RS07895 6db9fe5ec30c14a416873b5ebffc0547 298 PANTHER PTHR10907:SF47 1 297 1.7E-41 T 23-04-2016 RR42_RS07895 6db9fe5ec30c14a416873b5ebffc0547 298 PANTHER PTHR10907 1 297 1.7E-41 T 23-04-2016 RR42_RS07895 6db9fe5ec30c14a416873b5ebffc0547 298 Gene3D G3DSA:2.120.10.30 4 297 1.7E-60 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like RR42_RS04240 e26d84792c8f6655ea7ae2e56f3bc0fd 56 ProSitePatterns PS00202 Rubredoxin signature. 35 45 - T 23-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 RR42_RS04240 e26d84792c8f6655ea7ae2e56f3bc0fd 56 Pfam PF00301 Rubredoxin 6 51 1.2E-22 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 RR42_RS04240 e26d84792c8f6655ea7ae2e56f3bc0fd 56 SUPERFAMILY SSF57802 2 54 3.7E-23 T 23-04-2016 RR42_RS04240 e26d84792c8f6655ea7ae2e56f3bc0fd 56 PRINTS PR00163 Rubredoxin signature 5 21 2.3E-8 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 RR42_RS04240 e26d84792c8f6655ea7ae2e56f3bc0fd 56 PRINTS PR00163 Rubredoxin signature 35 51 2.3E-8 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 RR42_RS04240 e26d84792c8f6655ea7ae2e56f3bc0fd 56 Gene3D G3DSA:2.20.28.10 2 54 4.1E-26 T 23-04-2016 IPR004039 Rubredoxin-type fold RR42_RS04240 e26d84792c8f6655ea7ae2e56f3bc0fd 56 PIRSF PIRSF000071 1 56 5.7E-26 T 23-04-2016 IPR024922 Rubredoxin GO:0005506|GO:0009055 RR42_RS12030 5e0796a0660358b7b7b18800f1616564 453 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 446 2.1E-194 T 23-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 RR42_RS12030 5e0796a0660358b7b7b18800f1616564 453 SUPERFAMILY SSF52540 65 282 1.35E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12030 5e0796a0660358b7b7b18800f1616564 453 PANTHER PTHR32472 2 450 3.0E-206 T 23-04-2016 RR42_RS12030 5e0796a0660358b7b7b18800f1616564 453 SMART SM00382 86 239 1.7E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS12030 5e0796a0660358b7b7b18800f1616564 453 Pfam PF13481 AAA domain 59 217 1.8E-17 T 23-04-2016 RR42_RS12030 5e0796a0660358b7b7b18800f1616564 453 PRINTS PR01874 DNA repair protein radA signature 208 236 5.2E-95 T 23-04-2016 RR42_RS12030 5e0796a0660358b7b7b18800f1616564 453 PRINTS PR01874 DNA repair protein radA signature 78 106 5.2E-95 T 23-04-2016 RR42_RS12030 5e0796a0660358b7b7b18800f1616564 453 PRINTS PR01874 DNA repair protein radA signature 317 340 5.2E-95 T 23-04-2016 RR42_RS12030 5e0796a0660358b7b7b18800f1616564 453 PRINTS PR01874 DNA repair protein radA signature 10 34 5.2E-95 T 23-04-2016 RR42_RS12030 5e0796a0660358b7b7b18800f1616564 453 PRINTS PR01874 DNA repair protein radA signature 169 193 5.2E-95 T 23-04-2016 RR42_RS12030 5e0796a0660358b7b7b18800f1616564 453 PRINTS PR01874 DNA repair protein radA signature 243 269 5.2E-95 T 23-04-2016 RR42_RS12030 5e0796a0660358b7b7b18800f1616564 453 PRINTS PR01874 DNA repair protein radA signature 119 136 5.2E-95 T 23-04-2016 RR42_RS12030 5e0796a0660358b7b7b18800f1616564 453 SUPERFAMILY SSF54211 250 264 5.31E-40 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RR42_RS12030 5e0796a0660358b7b7b18800f1616564 453 SUPERFAMILY SSF54211 298 450 5.31E-40 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RR42_RS12030 5e0796a0660358b7b7b18800f1616564 453 Gene3D G3DSA:3.30.230.10 279 448 4.3E-32 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RR42_RS12030 5e0796a0660358b7b7b18800f1616564 453 Gene3D G3DSA:3.40.50.300 55 270 1.2E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS00775 050f05bd06792d02d2d8765062b70701 915 Pfam PF00809 Pterin binding enzyme 31 269 1.5E-59 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 RR42_RS00775 050f05bd06792d02d2d8765062b70701 915 Gene3D G3DSA:3.40.50.280 429 583 3.8E-62 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RR42_RS00775 050f05bd06792d02d2d8765062b70701 915 Gene3D G3DSA:3.10.196.10 645 915 1.1E-97 T 23-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RR42_RS00775 050f05bd06792d02d2d8765062b70701 915 Gene3D G3DSA:3.20.20.20 35 307 6.9E-117 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 RR42_RS00775 050f05bd06792d02d2d8765062b70701 915 TIGRFAM TIGR02082 metH: methionine synthase 9 885 0.0 T 23-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RR42_RS00775 050f05bd06792d02d2d8765062b70701 915 Pfam PF02310 B12 binding domain 432 525 6.5E-17 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RR42_RS00775 050f05bd06792d02d2d8765062b70701 915 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 625 901 4.2E-119 T 23-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RR42_RS00775 050f05bd06792d02d2d8765062b70701 915 Gene3D G3DSA:1.10.1240.10 330 414 1.1E-32 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RR42_RS00775 050f05bd06792d02d2d8765062b70701 915 SUPERFAMILY SSF56507 589 915 2.62E-121 T 23-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RR42_RS00775 050f05bd06792d02d2d8765062b70701 915 PIRSF PIRSF000381 2 888 0.0 T 23-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RR42_RS00775 050f05bd06792d02d2d8765062b70701 915 Gene3D G3DSA:3.20.20.330 9 34 3.3E-4 T 23-04-2016 IPR003726 Homocysteine-binding domain RR42_RS00775 050f05bd06792d02d2d8765062b70701 915 SMART SM01018 330 417 3.4E-38 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RR42_RS00775 050f05bd06792d02d2d8765062b70701 915 Pfam PF02607 B12 binding domain 332 409 1.8E-24 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RR42_RS00775 050f05bd06792d02d2d8765062b70701 915 SUPERFAMILY SSF52242 426 582 1.15E-42 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RR42_RS00775 050f05bd06792d02d2d8765062b70701 915 SUPERFAMILY SSF51717 27 301 3.27E-91 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 RR42_RS00775 050f05bd06792d02d2d8765062b70701 915 SUPERFAMILY SSF47644 330 416 4.84E-24 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RR42_RS20820 6d7e2d613ead7336603e7db7b157f35b 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 121 6.0E-10 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RR42_RS20820 6d7e2d613ead7336603e7db7b157f35b 128 SUPERFAMILY SSF54593 2 127 7.79E-25 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS20820 6d7e2d613ead7336603e7db7b157f35b 128 PANTHER PTHR35006 1 128 4.0E-44 T 23-04-2016 RR42_RS20820 6d7e2d613ead7336603e7db7b157f35b 128 Gene3D G3DSA:3.10.180.10 1 125 5.9E-34 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS04315 a45691ff4ecf7dae03c1f5e1d3ecba0b 315 Gene3D G3DSA:3.50.50.60 2 116 5.6E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS04315 a45691ff4ecf7dae03c1f5e1d3ecba0b 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 1.2E-41 T 23-04-2016 RR42_RS04315 a45691ff4ecf7dae03c1f5e1d3ecba0b 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.2E-41 T 23-04-2016 RR42_RS04315 a45691ff4ecf7dae03c1f5e1d3ecba0b 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 1.2E-41 T 23-04-2016 RR42_RS04315 a45691ff4ecf7dae03c1f5e1d3ecba0b 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 1.2E-41 T 23-04-2016 RR42_RS04315 a45691ff4ecf7dae03c1f5e1d3ecba0b 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 1.2E-41 T 23-04-2016 RR42_RS04315 a45691ff4ecf7dae03c1f5e1d3ecba0b 315 Gene3D G3DSA:3.50.50.60 232 311 3.0E-9 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS04315 a45691ff4ecf7dae03c1f5e1d3ecba0b 315 SUPERFAMILY SSF51905 1 309 1.73E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS04315 a45691ff4ecf7dae03c1f5e1d3ecba0b 315 Gene3D G3DSA:3.50.50.60 117 231 4.0E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS04315 a45691ff4ecf7dae03c1f5e1d3ecba0b 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 166 4.2E-79 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RR42_RS04315 a45691ff4ecf7dae03c1f5e1d3ecba0b 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 4.2E-79 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RR42_RS04315 a45691ff4ecf7dae03c1f5e1d3ecba0b 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 274 292 4.2E-79 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RR42_RS04315 a45691ff4ecf7dae03c1f5e1d3ecba0b 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 60 70 4.2E-79 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RR42_RS04315 a45691ff4ecf7dae03c1f5e1d3ecba0b 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 236 257 4.2E-79 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RR42_RS04315 a45691ff4ecf7dae03c1f5e1d3ecba0b 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 197 213 4.2E-79 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RR42_RS04315 a45691ff4ecf7dae03c1f5e1d3ecba0b 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 105 113 4.2E-79 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RR42_RS04315 a45691ff4ecf7dae03c1f5e1d3ecba0b 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 39 54 4.2E-79 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RR42_RS04315 a45691ff4ecf7dae03c1f5e1d3ecba0b 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 127 139 4.2E-79 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RR42_RS04315 a45691ff4ecf7dae03c1f5e1d3ecba0b 315 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 134 154 - T 23-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 RR42_RS04315 a45691ff4ecf7dae03c1f5e1d3ecba0b 315 PANTHER PTHR22912:SF48 1 312 3.4E-157 T 23-04-2016 RR42_RS04315 a45691ff4ecf7dae03c1f5e1d3ecba0b 315 PANTHER PTHR22912 1 312 3.4E-157 T 23-04-2016 RR42_RS04315 a45691ff4ecf7dae03c1f5e1d3ecba0b 315 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 299 1.0E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS04315 a45691ff4ecf7dae03c1f5e1d3ecba0b 315 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 6 311 3.0E-120 T 23-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 RR42_RS16120 0aff23893085aad93cfd6906437fb32a 346 PANTHER PTHR21712 6 342 3.3E-116 T 23-04-2016 RR42_RS16120 0aff23893085aad93cfd6906437fb32a 346 Gene3D G3DSA:3.40.50.10210 68 323 1.4E-109 T 23-04-2016 RR42_RS16120 0aff23893085aad93cfd6906437fb32a 346 Gene3D G3DSA:1.10.1610.10 3 67 2.3E-31 T 23-04-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 RR42_RS16120 0aff23893085aad93cfd6906437fb32a 346 PANTHER PTHR21712:SF4 6 342 3.3E-116 T 23-04-2016 RR42_RS16120 0aff23893085aad93cfd6906437fb32a 346 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 10 341 2.3E-136 T 23-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 RR42_RS16120 0aff23893085aad93cfd6906437fb32a 346 Pfam PF02277 Phosphoribosyltransferase 6 341 6.2E-133 T 23-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 RR42_RS16120 0aff23893085aad93cfd6906437fb32a 346 SUPERFAMILY SSF52733 4 342 1.44E-119 T 23-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 RR42_RS16120 0aff23893085aad93cfd6906437fb32a 346 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 8 343 36.678 T 23-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 RR42_RS09065 3b4acbe8b60d565668d817693fe606a9 320 Pfam PF00892 EamA-like transporter family 171 300 6.2E-10 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS09065 3b4acbe8b60d565668d817693fe606a9 320 Pfam PF00892 EamA-like transporter family 44 162 3.1E-6 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS09065 3b4acbe8b60d565668d817693fe606a9 320 PANTHER PTHR22911 4 296 5.2E-58 T 23-04-2016 RR42_RS09065 3b4acbe8b60d565668d817693fe606a9 320 PANTHER PTHR22911:SF70 4 296 5.2E-58 T 23-04-2016 RR42_RS09065 3b4acbe8b60d565668d817693fe606a9 320 SUPERFAMILY SSF103481 66 166 4.05E-13 T 23-04-2016 RR42_RS09065 3b4acbe8b60d565668d817693fe606a9 320 SUPERFAMILY SSF103481 212 305 1.24E-12 T 23-04-2016 RR42_RS14275 95afc8db981383db7bbd647b942cbf22 65 Gene3D G3DSA:2.40.50.140 1 65 2.5E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS14275 95afc8db981383db7bbd647b942cbf22 65 PRINTS PR00050 Cold shock protein signature 38 56 6.9E-8 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RR42_RS14275 95afc8db981383db7bbd647b942cbf22 65 PRINTS PR00050 Cold shock protein signature 4 19 6.9E-8 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RR42_RS14275 95afc8db981383db7bbd647b942cbf22 65 PIRSF PIRSF002599 1 65 5.3E-20 T 23-04-2016 IPR012156 Cold shock, CspA GO:0003676 RR42_RS14275 95afc8db981383db7bbd647b942cbf22 65 SMART SM00357 3 65 3.1E-21 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 RR42_RS14275 95afc8db981383db7bbd647b942cbf22 65 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 23-04-2016 IPR019844 Cold-shock conserved site RR42_RS14275 95afc8db981383db7bbd647b942cbf22 65 SUPERFAMILY SSF50249 1 64 2.14E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS14275 95afc8db981383db7bbd647b942cbf22 65 PANTHER PTHR11544 1 65 1.8E-18 T 23-04-2016 RR42_RS14275 95afc8db981383db7bbd647b942cbf22 65 Pfam PF00313 'Cold-shock' DNA-binding domain 3 64 3.1E-24 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RR42_RS06580 5777334dfc813e6461dd46c03215e9d2 120 PANTHER PTHR11803 14 119 4.5E-30 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family RR42_RS06580 5777334dfc813e6461dd46c03215e9d2 120 SUPERFAMILY SSF55298 13 119 1.73E-25 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RR42_RS06580 5777334dfc813e6461dd46c03215e9d2 120 Pfam PF01042 Endoribonuclease L-PSP 14 118 7.0E-20 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family RR42_RS06580 5777334dfc813e6461dd46c03215e9d2 120 PANTHER PTHR11803:SF17 14 119 4.5E-30 T 23-04-2016 RR42_RS06580 5777334dfc813e6461dd46c03215e9d2 120 Gene3D G3DSA:3.30.1330.40 15 118 7.4E-22 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RR42_RS01385 f56c60dc7b0dfe7e643ac953a603ef3d 276 PANTHER PTHR21091:SF31 133 265 7.6E-43 T 23-04-2016 RR42_RS01385 f56c60dc7b0dfe7e643ac953a603ef3d 276 Pfam PF02219 Methylenetetrahydrofolate reductase 4 274 8.3E-95 T 23-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 RR42_RS01385 f56c60dc7b0dfe7e643ac953a603ef3d 276 Gene3D G3DSA:3.20.20.220 3 276 2.3E-112 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like RR42_RS01385 f56c60dc7b0dfe7e643ac953a603ef3d 276 SUPERFAMILY SSF51730 4 275 6.28E-102 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like RR42_RS01385 f56c60dc7b0dfe7e643ac953a603ef3d 276 PANTHER PTHR21091 133 265 7.6E-43 T 23-04-2016 RR42_RS01385 f56c60dc7b0dfe7e643ac953a603ef3d 276 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 6 275 4.9E-105 T 23-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 RR42_RS12330 d336228ee95c4007052327debebc9ad0 209 Pfam PF00043 Glutathione S-transferase, C-terminal domain 112 197 2.4E-6 T 23-04-2016 IPR004046 Glutathione S-transferase, C-terminal RR42_RS12330 d336228ee95c4007052327debebc9ad0 209 Gene3D G3DSA:1.20.1050.10 81 205 4.5E-28 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS12330 d336228ee95c4007052327debebc9ad0 209 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 6.3E-14 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RR42_RS12330 d336228ee95c4007052327debebc9ad0 209 PANTHER PTHR11260:SF157 1 207 1.4E-71 T 23-04-2016 RR42_RS12330 d336228ee95c4007052327debebc9ad0 209 PANTHER PTHR11260 1 207 1.4E-71 T 23-04-2016 RR42_RS12330 d336228ee95c4007052327debebc9ad0 209 SUPERFAMILY SSF52833 1 85 6.28E-24 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS12330 d336228ee95c4007052327debebc9ad0 209 SUPERFAMILY SSF47616 82 205 2.09E-25 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS12330 d336228ee95c4007052327debebc9ad0 209 Gene3D G3DSA:3.40.30.10 1 79 1.1E-24 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS17845 ed009f5aa150885bef5b86c76228f2a1 307 Pfam PF00892 EamA-like transporter family 11 138 8.0E-13 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS17845 ed009f5aa150885bef5b86c76228f2a1 307 Pfam PF00892 EamA-like transporter family 148 289 5.7E-16 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS17845 ed009f5aa150885bef5b86c76228f2a1 307 SUPERFAMILY SSF103481 197 293 1.83E-14 T 23-04-2016 RR42_RS17845 ed009f5aa150885bef5b86c76228f2a1 307 PANTHER PTHR12715 5 292 3.9E-47 T 23-04-2016 RR42_RS17845 ed009f5aa150885bef5b86c76228f2a1 307 SUPERFAMILY SSF103481 44 142 1.03E-8 T 23-04-2016 RR42_RS10900 c01bb60b4149f96b16df9218bf1a44b2 335 SUPERFAMILY SSF52540 4 217 2.13E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS10900 c01bb60b4149f96b16df9218bf1a44b2 335 Pfam PF13177 DNA polymerase III, delta subunit 17 181 2.9E-40 T 23-04-2016 RR42_RS10900 c01bb60b4149f96b16df9218bf1a44b2 335 Gene3D G3DSA:3.40.50.300 4 182 6.2E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS10900 c01bb60b4149f96b16df9218bf1a44b2 335 PANTHER PTHR11669:SF8 17 84 3.7E-49 T 23-04-2016 RR42_RS10900 c01bb60b4149f96b16df9218bf1a44b2 335 PANTHER PTHR11669:SF8 105 227 3.7E-49 T 23-04-2016 RR42_RS10900 c01bb60b4149f96b16df9218bf1a44b2 335 PANTHER PTHR11669 17 84 3.7E-49 T 23-04-2016 RR42_RS10900 c01bb60b4149f96b16df9218bf1a44b2 335 PANTHER PTHR11669 105 227 3.7E-49 T 23-04-2016 RR42_RS10900 c01bb60b4149f96b16df9218bf1a44b2 335 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 17 212 4.1E-61 T 23-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS18820 b05091b2c991c3efa37608bbb5d45a1c 467 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 292 440 1.9E-41 T 23-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 RR42_RS18820 b05091b2c991c3efa37608bbb5d45a1c 467 SUPERFAMILY SSF81342 21 294 3.61E-94 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RR42_RS18820 b05091b2c991c3efa37608bbb5d45a1c 467 PANTHER PTHR19271:SF9 367 452 6.4E-222 T 23-04-2016 RR42_RS18820 b05091b2c991c3efa37608bbb5d45a1c 467 PANTHER PTHR19271:SF9 9 320 6.4E-222 T 23-04-2016 RR42_RS18820 b05091b2c991c3efa37608bbb5d45a1c 467 Gene3D G3DSA:1.20.810.10 14 321 5.1E-156 T 23-04-2016 IPR027387 Cytochrome b/b6-like domain RR42_RS18820 b05091b2c991c3efa37608bbb5d45a1c 467 Gene3D G3DSA:1.20.810.10 368 460 5.1E-156 T 23-04-2016 IPR027387 Cytochrome b/b6-like domain RR42_RS18820 b05091b2c991c3efa37608bbb5d45a1c 467 Pfam PF00033 Cytochrome b/b6/petB 32 226 4.9E-63 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RR42_RS18820 b05091b2c991c3efa37608bbb5d45a1c 467 PIRSF PIRSF038885 4 466 2.5E-147 T 23-04-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 RR42_RS18820 b05091b2c991c3efa37608bbb5d45a1c 467 SUPERFAMILY SSF81648 295 317 1.96E-23 T 23-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 RR42_RS18820 b05091b2c991c3efa37608bbb5d45a1c 467 SUPERFAMILY SSF81648 364 454 1.96E-23 T 23-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 RR42_RS18820 b05091b2c991c3efa37608bbb5d45a1c 467 PANTHER PTHR19271 367 452 6.4E-222 T 23-04-2016 RR42_RS18820 b05091b2c991c3efa37608bbb5d45a1c 467 PANTHER PTHR19271 9 320 6.4E-222 T 23-04-2016 RR42_RS04250 f2336463c14c0b18f275055e1f211971 122 PANTHER PTHR26402 4 121 5.2E-41 T 23-04-2016 RR42_RS04250 f2336463c14c0b18f275055e1f211971 122 SUPERFAMILY SSF52172 5 121 6.83E-38 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS04250 f2336463c14c0b18f275055e1f211971 122 Pfam PF00072 Response regulator receiver domain 6 117 1.0E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS04250 f2336463c14c0b18f275055e1f211971 122 Gene3D G3DSA:3.40.50.2300 5 121 8.8E-39 T 23-04-2016 RR42_RS04250 f2336463c14c0b18f275055e1f211971 122 SMART SM00448 4 117 2.3E-38 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS00235 fb2aa69529a7633bb582f60c112663c4 423 PANTHER PTHR38442 6 421 1.8E-117 T 23-04-2016 RR42_RS00235 fb2aa69529a7633bb582f60c112663c4 423 Pfam PF04286 Protein of unknown function (DUF445) 44 417 5.3E-93 T 23-04-2016 IPR007383 Protein of unknown function DUF445 RR42_RS14620 40aff82aeff03ead5e4770b2c8881a82 125 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 38 83 2.5E-13 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RR42_RS14620 40aff82aeff03ead5e4770b2c8881a82 125 SUPERFAMILY SSF143120 36 100 3.92E-14 T 23-04-2016 RR42_RS14620 40aff82aeff03ead5e4770b2c8881a82 125 Gene3D G3DSA:3.40.1620.10 36 83 1.1E-14 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RR42_RS14620 40aff82aeff03ead5e4770b2c8881a82 125 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 36 83 5.2E-16 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RR42_RS11005 06c9a615cf1829a58bac1d94a396d2b0 382 PANTHER PTHR11496 8 382 6.7E-95 T 23-04-2016 RR42_RS11005 06c9a615cf1829a58bac1d94a396d2b0 382 Gene3D G3DSA:3.40.50.1970 5 183 5.7E-52 T 23-04-2016 RR42_RS11005 06c9a615cf1829a58bac1d94a396d2b0 382 Gene3D G3DSA:1.20.1090.10 184 382 8.6E-56 T 23-04-2016 RR42_RS11005 06c9a615cf1829a58bac1d94a396d2b0 382 PANTHER PTHR11496:SF75 8 382 6.7E-95 T 23-04-2016 RR42_RS11005 06c9a615cf1829a58bac1d94a396d2b0 382 SUPERFAMILY SSF56796 4 380 2.88E-110 T 23-04-2016 RR42_RS11005 06c9a615cf1829a58bac1d94a396d2b0 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 23-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 RR42_RS11005 06c9a615cf1829a58bac1d94a396d2b0 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 373 1.7E-105 T 23-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 RR42_RS13885 4e343d7ccf2a016d1d5e177b6e45b080 303 SUPERFAMILY SSF103481 183 286 2.35E-15 T 23-04-2016 RR42_RS13885 4e343d7ccf2a016d1d5e177b6e45b080 303 PANTHER PTHR12715 1 283 2.6E-54 T 23-04-2016 RR42_RS13885 4e343d7ccf2a016d1d5e177b6e45b080 303 SUPERFAMILY SSF103481 26 127 1.96E-17 T 23-04-2016 RR42_RS13885 4e343d7ccf2a016d1d5e177b6e45b080 303 PANTHER PTHR12715:SF11 1 283 2.6E-54 T 23-04-2016 RR42_RS13885 4e343d7ccf2a016d1d5e177b6e45b080 303 Pfam PF00892 EamA-like transporter family 146 282 5.1E-18 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS13885 4e343d7ccf2a016d1d5e177b6e45b080 303 Pfam PF00892 EamA-like transporter family 4 124 1.4E-18 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS20295 c1f0f082d4db0eca1c91bc7384e594d3 311 SUPERFAMILY SSF53474 36 307 2.72E-38 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS20295 c1f0f082d4db0eca1c91bc7384e594d3 311 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 100 8.5E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS20295 c1f0f082d4db0eca1c91bc7384e594d3 311 PRINTS PR00111 Alpha/beta hydrolase fold signature 133 146 8.5E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS20295 c1f0f082d4db0eca1c91bc7384e594d3 311 PRINTS PR00111 Alpha/beta hydrolase fold signature 243 257 8.5E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS20295 c1f0f082d4db0eca1c91bc7384e594d3 311 PANTHER PTHR11614 37 309 2.2E-65 T 23-04-2016 RR42_RS20295 c1f0f082d4db0eca1c91bc7384e594d3 311 PANTHER PTHR11614:SF87 37 309 2.2E-65 T 23-04-2016 RR42_RS20295 c1f0f082d4db0eca1c91bc7384e594d3 311 Gene3D G3DSA:3.40.50.1820 37 306 3.9E-41 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS20295 c1f0f082d4db0eca1c91bc7384e594d3 311 Pfam PF12146 Serine aminopeptidase, S33 56 287 1.4E-68 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 RR42_RS02160 ef14084f90096d3d26555ccfbd98a27c 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 321 3.4E-88 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS02160 ef14084f90096d3d26555ccfbd98a27c 327 PANTHER PTHR30349:SF16 4 311 4.1E-94 T 23-04-2016 RR42_RS02160 ef14084f90096d3d26555ccfbd98a27c 327 PANTHER PTHR30349 4 311 4.1E-94 T 23-04-2016 RR42_RS02160 ef14084f90096d3d26555ccfbd98a27c 327 PIRSF PIRSF017082 1 327 1.9E-82 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS02160 ef14084f90096d3d26555ccfbd98a27c 327 SUPERFAMILY SSF53850 114 290 4.22E-14 T 23-04-2016 RR42_RS07580 2cc75cd2bbd3eb6ce64f93047857414d 710 Gene3D G3DSA:3.40.50.300 443 453 4.1E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07580 2cc75cd2bbd3eb6ce64f93047857414d 710 Gene3D G3DSA:3.40.50.300 216 281 4.1E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07580 2cc75cd2bbd3eb6ce64f93047857414d 710 Gene3D G3DSA:3.40.50.300 46 144 4.1E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07580 2cc75cd2bbd3eb6ce64f93047857414d 710 SUPERFAMILY SSF52540 510 663 1.22E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07580 2cc75cd2bbd3eb6ce64f93047857414d 710 Pfam PF13307 Helicase C-terminal domain 512 674 9.2E-32 T 23-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 RR42_RS07580 2cc75cd2bbd3eb6ce64f93047857414d 710 Gene3D G3DSA:3.40.50.300 507 657 4.3E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07580 2cc75cd2bbd3eb6ce64f93047857414d 710 PANTHER PTHR11472:SF37 30 679 2.7E-178 T 23-04-2016 RR42_RS07580 2cc75cd2bbd3eb6ce64f93047857414d 710 SUPERFAMILY SSF52540 213 270 2.87E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07580 2cc75cd2bbd3eb6ce64f93047857414d 710 SUPERFAMILY SSF52540 620 656 2.87E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07580 2cc75cd2bbd3eb6ce64f93047857414d 710 SUPERFAMILY SSF52540 32 136 2.87E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07580 2cc75cd2bbd3eb6ce64f93047857414d 710 Pfam PF00270 DEAD/DEAH box helicase 60 261 1.0E-5 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RR42_RS07580 2cc75cd2bbd3eb6ce64f93047857414d 710 PANTHER PTHR11472 30 679 2.7E-178 T 23-04-2016 RR42_RS07580 2cc75cd2bbd3eb6ce64f93047857414d 710 SMART SM00491 531 661 1.8E-41 T 23-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 RR42_RS00945 e5fddc6f053fbadf4969274ced04b455 262 Gene3D G3DSA:3.30.470.20 24 82 6.2E-26 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RR42_RS00945 e5fddc6f053fbadf4969274ced04b455 262 Pfam PF00364 Biotin-requiring enzyme 191 255 1.2E-14 T 23-04-2016 IPR000089 Biotin/lipoyl attachment RR42_RS00945 e5fddc6f053fbadf4969274ced04b455 262 SUPERFAMILY SSF56059 7 82 7.95E-20 T 23-04-2016 RR42_RS00945 e5fddc6f053fbadf4969274ced04b455 262 Gene3D G3DSA:2.40.50.100 188 257 1.4E-21 T 23-04-2016 RR42_RS00945 e5fddc6f053fbadf4969274ced04b455 262 SUPERFAMILY SSF51230 182 257 3.8E-18 T 23-04-2016 IPR011053 Single hybrid motif RR42_RS00945 e5fddc6f053fbadf4969274ced04b455 262 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 4 82 2.3E-27 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RR42_RS00945 e5fddc6f053fbadf4969274ced04b455 262 PANTHER PTHR18866 7 82 2.1E-50 T 23-04-2016 RR42_RS09925 d5f02a74c63f451288fdaa99b9f62c53 84 Gene3D G3DSA:1.10.1220.10 9 47 2.7E-7 T 23-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 RR42_RS09925 d5f02a74c63f451288fdaa99b9f62c53 84 SUPERFAMILY SSF47598 2 69 2.37E-21 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RR42_RS20755 5ea34216b28a20e0142092fcbeae7339 323 Gene3D G3DSA:3.40.630.10 32 158 1.1E-6 T 23-04-2016 RR42_RS20755 5ea34216b28a20e0142092fcbeae7339 323 SUPERFAMILY SSF53187 7 320 1.74E-53 T 23-04-2016 RR42_RS20755 5ea34216b28a20e0142092fcbeae7339 323 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 41 240 4.5E-14 T 23-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 RR42_RS01820 0f2389ade2150e4959c17724287d4122 529 SMART SM00228 100 171 3.4E-17 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS01820 0f2389ade2150e4959c17724287d4122 529 Pfam PF13180 PDZ domain 100 179 1.4E-15 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS01820 0f2389ade2150e4959c17724287d4122 529 SUPERFAMILY SSF52096 36 118 2.32E-75 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS01820 0f2389ade2150e4959c17724287d4122 529 SUPERFAMILY SSF52096 193 386 2.32E-75 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS01820 0f2389ade2150e4959c17724287d4122 529 PANTHER PTHR32060 53 275 4.9E-113 T 23-04-2016 RR42_RS01820 0f2389ade2150e4959c17724287d4122 529 PANTHER PTHR32060 292 451 4.9E-113 T 23-04-2016 RR42_RS01820 0f2389ade2150e4959c17724287d4122 529 Pfam PF03572 Peptidase family S41 200 381 1.2E-51 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 RR42_RS01820 0f2389ade2150e4959c17724287d4122 529 SUPERFAMILY SSF50156 94 183 6.6E-20 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS01820 0f2389ade2150e4959c17724287d4122 529 SMART SM00245 173 382 6.0E-60 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 RR42_RS01820 0f2389ade2150e4959c17724287d4122 529 Gene3D G3DSA:3.30.750.44 53 106 4.2E-10 T 23-04-2016 RR42_RS01820 0f2389ade2150e4959c17724287d4122 529 Gene3D G3DSA:2.30.42.10 107 182 1.1E-28 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS01820 0f2389ade2150e4959c17724287d4122 529 Gene3D G3DSA:3.90.226.10 183 384 4.4E-65 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS01820 0f2389ade2150e4959c17724287d4122 529 Gene3D G3DSA:3.90.226.10 449 476 4.4E-65 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS01820 0f2389ade2150e4959c17724287d4122 529 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 53 384 3.6E-97 T 23-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 RR42_RS02620 8a1725cad161360b2252e719d5c13f22 140 PANTHER PTHR34352 1 140 2.6E-44 T 23-04-2016 RR42_RS02620 8a1725cad161360b2252e719d5c13f22 140 Gene3D G3DSA:2.20.25.10 1 36 3.8E-15 T 23-04-2016 RR42_RS02620 8a1725cad161360b2252e719d5c13f22 140 SUPERFAMILY SSF82784 1 139 4.71E-38 T 23-04-2016 IPR003718 OsmC/Ohr family RR42_RS02620 8a1725cad161360b2252e719d5c13f22 140 Gene3D G3DSA:3.30.300.20 41 138 5.7E-43 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta RR42_RS02620 8a1725cad161360b2252e719d5c13f22 140 Pfam PF02566 OsmC-like protein 35 133 9.3E-16 T 23-04-2016 IPR003718 OsmC/Ohr family RR42_RS10000 4e0452c285000e9db6985172d1268243 304 Pfam PF03466 LysR substrate binding domain 91 293 1.5E-34 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS10000 4e0452c285000e9db6985172d1268243 304 SUPERFAMILY SSF46785 5 115 5.75E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS10000 4e0452c285000e9db6985172d1268243 304 Gene3D G3DSA:1.10.10.10 6 87 2.1E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS10000 4e0452c285000e9db6985172d1268243 304 PANTHER PTHR30419 1 293 2.5E-98 T 23-04-2016 RR42_RS10000 4e0452c285000e9db6985172d1268243 304 Gene3D G3DSA:3.40.190.10 93 178 3.9E-18 T 23-04-2016 RR42_RS10000 4e0452c285000e9db6985172d1268243 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.9E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS10000 4e0452c285000e9db6985172d1268243 304 Gene3D G3DSA:3.40.190.10 179 254 4.2E-13 T 23-04-2016 RR42_RS10000 4e0452c285000e9db6985172d1268243 304 PANTHER PTHR30419:SF2 1 293 2.5E-98 T 23-04-2016 RR42_RS10000 4e0452c285000e9db6985172d1268243 304 SUPERFAMILY SSF53850 91 299 1.54E-37 T 23-04-2016 RR42_RS11055 7919fed0d35ae5c4f565782654fa8750 336 PANTHER PTHR11695 23 334 7.4E-120 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RR42_RS11055 7919fed0d35ae5c4f565782654fa8750 336 PANTHER PTHR11695:SF528 23 334 7.4E-120 T 23-04-2016 RR42_RS11055 7919fed0d35ae5c4f565782654fa8750 336 SUPERFAMILY SSF51735 123 301 1.29E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS11055 7919fed0d35ae5c4f565782654fa8750 336 SMART SM00829 18 333 2.4E-6 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RR42_RS11055 7919fed0d35ae5c4f565782654fa8750 336 Gene3D G3DSA:3.90.180.10 2 140 3.6E-55 T 23-04-2016 IPR011032 GroES-like RR42_RS11055 7919fed0d35ae5c4f565782654fa8750 336 Pfam PF16884 N-terminal domain of oxidoreductase 6 113 1.1E-41 T 23-04-2016 RR42_RS11055 7919fed0d35ae5c4f565782654fa8750 336 Gene3D G3DSA:3.40.50.720 141 303 1.2E-64 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS11055 7919fed0d35ae5c4f565782654fa8750 336 SUPERFAMILY SSF50129 2 163 1.23E-43 T 23-04-2016 IPR011032 GroES-like RR42_RS11055 7919fed0d35ae5c4f565782654fa8750 336 Pfam PF00107 Zinc-binding dehydrogenase 158 293 1.0E-22 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RR42_RS16175 5253ed0d20d09d5bb06d0c2ce0319ec4 260 PANTHER PTHR11941 9 257 1.8E-58 T 23-04-2016 RR42_RS16175 5253ed0d20d09d5bb06d0c2ce0319ec4 260 SUPERFAMILY SSF52096 2 259 6.34E-66 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS16175 5253ed0d20d09d5bb06d0c2ce0319ec4 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 259 9.4E-41 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RR42_RS16175 5253ed0d20d09d5bb06d0c2ce0319ec4 260 Gene3D G3DSA:3.90.226.10 4 257 4.6E-60 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS02905 57f8a5c3de255eac7eacf627137597e2 318 PIRSF PIRSF017082 1 317 1.1E-76 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS02905 57f8a5c3de255eac7eacf627137597e2 318 PANTHER PTHR30349 3 310 9.4E-95 T 23-04-2016 RR42_RS02905 57f8a5c3de255eac7eacf627137597e2 318 PANTHER PTHR30349:SF16 3 310 9.4E-95 T 23-04-2016 RR42_RS02905 57f8a5c3de255eac7eacf627137597e2 318 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 36 311 1.4E-85 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS02905 57f8a5c3de255eac7eacf627137597e2 318 SUPERFAMILY SSF53850 104 280 7.97E-13 T 23-04-2016 RR42_RS05480 9c4675746d1df5f04eeaf688276ec09d 90 ProSitePatterns PS00362 Ribosomal protein S15 signature. 40 70 - T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS05480 9c4675746d1df5f04eeaf688276ec09d 90 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 89 3.0E-29 T 23-04-2016 RR42_RS05480 9c4675746d1df5f04eeaf688276ec09d 90 SUPERFAMILY SSF47060 8 90 1.65E-34 T 23-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 RR42_RS05480 9c4675746d1df5f04eeaf688276ec09d 90 Gene3D G3DSA:1.10.287.10 8 90 1.3E-38 T 23-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 RR42_RS05480 9c4675746d1df5f04eeaf688276ec09d 90 Pfam PF00312 Ribosomal protein S15 9 89 4.0E-38 T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS05480 9c4675746d1df5f04eeaf688276ec09d 90 PANTHER PTHR23321 9 89 1.5E-40 T 23-04-2016 RR42_RS05480 9c4675746d1df5f04eeaf688276ec09d 90 SMART SM01387 9 89 4.5E-53 T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS05480 9c4675746d1df5f04eeaf688276ec09d 90 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 1 90 22.424 T 23-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 RR42_RS05480 9c4675746d1df5f04eeaf688276ec09d 90 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 8 90 7.9E-40 T 23-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 RR42_RS10950 a3f9b9d78833dfe45d5af4cefbf39c73 141 Gene3D G3DSA:3.40.630.30 15 138 3.5E-36 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS10950 a3f9b9d78833dfe45d5af4cefbf39c73 141 SUPERFAMILY SSF55729 2 139 4.79E-39 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS10950 a3f9b9d78833dfe45d5af4cefbf39c73 141 PANTHER PTHR13355:SF8 20 141 3.6E-37 T 23-04-2016 RR42_RS10950 a3f9b9d78833dfe45d5af4cefbf39c73 141 Pfam PF13673 Acetyltransferase (GNAT) domain 23 139 4.4E-22 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RR42_RS10950 a3f9b9d78833dfe45d5af4cefbf39c73 141 PANTHER PTHR13355 20 141 3.6E-37 T 23-04-2016 RR42_RS10680 e59b51c58aa18ddfc83c7dd9c2e61bdb 138 PANTHER PTHR35006 4 131 2.1E-20 T 23-04-2016 RR42_RS10680 e59b51c58aa18ddfc83c7dd9c2e61bdb 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 129 3.3E-7 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RR42_RS10680 e59b51c58aa18ddfc83c7dd9c2e61bdb 138 Gene3D G3DSA:3.10.180.10 3 131 3.6E-19 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS10680 e59b51c58aa18ddfc83c7dd9c2e61bdb 138 SUPERFAMILY SSF54593 5 132 7.92E-18 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS05830 b1132468a97e344a3e0c8efbcdee6792 374 PANTHER PTHR15535:SF21 218 307 3.3E-21 T 23-04-2016 RR42_RS05830 b1132468a97e344a3e0c8efbcdee6792 374 PANTHER PTHR15535 218 307 3.3E-21 T 23-04-2016 RR42_RS05830 b1132468a97e344a3e0c8efbcdee6792 374 Pfam PF07394 Protein of unknown function (DUF1501) 16 346 3.1E-36 T 23-04-2016 IPR010869 Protein of unknown function DUF1501 RR42_RS16050 d0cbfae1d2d792708d1940b2a86f762e 293 Hamap MF_01805 Segregation and condensation protein A [scpA]. 56 290 21.215 T 23-04-2016 IPR003768 Segregation and condensation protein A RR42_RS16050 d0cbfae1d2d792708d1940b2a86f762e 293 PANTHER PTHR33969 40 288 1.1E-72 T 23-04-2016 RR42_RS16050 d0cbfae1d2d792708d1940b2a86f762e 293 Pfam PF02616 Segregation and condensation protein ScpA 73 288 6.9E-34 T 23-04-2016 IPR003768 Segregation and condensation protein A RR42_RS16050 d0cbfae1d2d792708d1940b2a86f762e 293 PANTHER PTHR33969:SF2 40 288 1.1E-72 T 23-04-2016 RR42_RS01490 fdeed9f7b948646ea439e89fd27489f7 477 SUPERFAMILY SSF109604 10 277 1.88E-40 T 23-04-2016 RR42_RS01490 fdeed9f7b948646ea439e89fd27489f7 477 Gene3D G3DSA:1.10.3150.10 9 276 7.7E-52 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD RR42_RS01490 fdeed9f7b948646ea439e89fd27489f7 477 PANTHER PTHR33525 37 293 1.1E-22 T 23-04-2016 RR42_RS01490 fdeed9f7b948646ea439e89fd27489f7 477 PANTHER PTHR33525:SF3 37 293 1.1E-22 T 23-04-2016 RR42_RS01490 fdeed9f7b948646ea439e89fd27489f7 477 Pfam PF08668 HDOD domain 35 212 2.0E-30 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD RR42_RS01490 fdeed9f7b948646ea439e89fd27489f7 477 Gene3D G3DSA:3.30.450.40 307 439 6.4E-6 T 23-04-2016 IPR029016 GAF domain-like RR42_RS01490 fdeed9f7b948646ea439e89fd27489f7 477 SUPERFAMILY SSF55781 307 440 1.47E-6 T 23-04-2016 IPR029016 GAF domain-like RR42_RS11780 076736a4b37f925c48158cecb0e2a3f4 310 SUPERFAMILY SSF117892 54 188 6.93E-40 T 23-04-2016 IPR001107 Band 7 domain RR42_RS11780 076736a4b37f925c48158cecb0e2a3f4 310 SMART SM00244 23 181 1.2E-58 T 23-04-2016 IPR001107 Band 7 domain RR42_RS11780 076736a4b37f925c48158cecb0e2a3f4 310 PRINTS PR00721 Stomatin signature 30 52 6.2E-31 T 23-04-2016 IPR001972 Stomatin family GO:0016020 RR42_RS11780 076736a4b37f925c48158cecb0e2a3f4 310 PRINTS PR00721 Stomatin signature 78 99 6.2E-31 T 23-04-2016 IPR001972 Stomatin family GO:0016020 RR42_RS11780 076736a4b37f925c48158cecb0e2a3f4 310 PRINTS PR00721 Stomatin signature 113 130 6.2E-31 T 23-04-2016 IPR001972 Stomatin family GO:0016020 RR42_RS11780 076736a4b37f925c48158cecb0e2a3f4 310 PRINTS PR00721 Stomatin signature 176 197 6.2E-31 T 23-04-2016 IPR001972 Stomatin family GO:0016020 RR42_RS11780 076736a4b37f925c48158cecb0e2a3f4 310 PRINTS PR00721 Stomatin signature 133 156 6.2E-31 T 23-04-2016 IPR001972 Stomatin family GO:0016020 RR42_RS11780 076736a4b37f925c48158cecb0e2a3f4 310 PRINTS PR00721 Stomatin signature 157 175 6.2E-31 T 23-04-2016 IPR001972 Stomatin family GO:0016020 RR42_RS11780 076736a4b37f925c48158cecb0e2a3f4 310 PANTHER PTHR10264 11 304 2.8E-136 T 23-04-2016 IPR001972 Stomatin family GO:0016020 RR42_RS11780 076736a4b37f925c48158cecb0e2a3f4 310 Pfam PF01145 SPFH domain / Band 7 family 27 197 3.2E-31 T 23-04-2016 IPR001107 Band 7 domain RR42_RS11780 076736a4b37f925c48158cecb0e2a3f4 310 Pfam PF16200 C-terminal region of band_7 246 306 1.7E-26 T 23-04-2016 IPR032435 Band 7, C-terminal extension RR42_RS11780 076736a4b37f925c48158cecb0e2a3f4 310 PANTHER PTHR10264:SF27 11 304 2.8E-136 T 23-04-2016 RR42_RS11910 95ffbadb09f6e14fa30f53b28944f585 461 SMART SM00771 307 436 1.9E-30 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RR42_RS11910 95ffbadb09f6e14fa30f53b28944f585 461 SUPERFAMILY SSF64383 307 443 9.15E-22 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RR42_RS11910 95ffbadb09f6e14fa30f53b28944f585 461 Gene3D G3DSA:3.30.1400.10 306 442 2.7E-21 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RR42_RS11910 95ffbadb09f6e14fa30f53b28944f585 461 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 311 429 4.6E-11 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RR42_RS11910 95ffbadb09f6e14fa30f53b28944f585 461 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 313 436 3.0E-7 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RR42_RS19045 b3044251203669ea03f195b6a3c18905 111 Hamap MF_00142 Protein CyaY [cyaY]. 4 110 25.254 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RR42_RS19045 b3044251203669ea03f195b6a3c18905 111 SUPERFAMILY SSF55387 2 107 4.53E-31 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RR42_RS19045 b3044251203669ea03f195b6a3c18905 111 Pfam PF01491 Frataxin-like domain 4 106 4.2E-24 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RR42_RS19045 b3044251203669ea03f195b6a3c18905 111 PANTHER PTHR16821 1 110 1.3E-19 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RR42_RS19045 b3044251203669ea03f195b6a3c18905 111 ProSitePatterns PS01344 Frataxin family signature. 55 69 - T 23-04-2016 IPR020895 Frataxin conserved site RR42_RS19045 b3044251203669ea03f195b6a3c18905 111 SMART SM01219 4 111 1.9E-45 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RR42_RS19045 b3044251203669ea03f195b6a3c18905 111 Gene3D G3DSA:3.30.920.10 3 110 3.8E-27 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RR42_RS19045 b3044251203669ea03f195b6a3c18905 111 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 6 109 8.0E-35 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RR42_RS13040 d05a82b4db38e1c4a5d3ca762cd13ea8 91 PIRSF PIRSF029827 1 90 1.1E-40 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 RR42_RS13040 d05a82b4db38e1c4a5d3ca762cd13ea8 91 Gene3D G3DSA:1.10.3880.10 1 89 1.2E-41 T 23-04-2016 RR42_RS13040 d05a82b4db38e1c4a5d3ca762cd13ea8 91 PANTHER PTHR36965:SF1 2 91 8.4E-41 T 23-04-2016 RR42_RS13040 d05a82b4db38e1c4a5d3ca762cd13ea8 91 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 75 8.0E-27 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 RR42_RS13040 d05a82b4db38e1c4a5d3ca762cd13ea8 91 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.363 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 RR42_RS13040 d05a82b4db38e1c4a5d3ca762cd13ea8 91 SUPERFAMILY SSF111148 1 89 7.72E-40 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 RR42_RS13040 d05a82b4db38e1c4a5d3ca762cd13ea8 91 PANTHER PTHR36965 2 91 8.4E-41 T 23-04-2016 RR42_RS13040 d05a82b4db38e1c4a5d3ca762cd13ea8 91 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.3E-43 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 RR42_RS02390 55047f01352428a648c5feee6a4c6489 627 Gene3D G3DSA:1.20.1560.10 31 362 3.7E-20 T 23-04-2016 RR42_RS02390 55047f01352428a648c5feee6a4c6489 627 SUPERFAMILY SSF52540 418 597 3.58E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02390 55047f01352428a648c5feee6a4c6489 627 PANTHER PTHR11384:SF3 21 597 3.4E-196 T 23-04-2016 RR42_RS02390 55047f01352428a648c5feee6a4c6489 627 PANTHER PTHR11384 21 597 3.4E-196 T 23-04-2016 RR42_RS02390 55047f01352428a648c5feee6a4c6489 627 ProSitePatterns PS00211 ABC transporters family signature. 528 542 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS02390 55047f01352428a648c5feee6a4c6489 627 SMART SM00382 430 603 1.6E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS02390 55047f01352428a648c5feee6a4c6489 627 SUPERFAMILY SSF90123 30 361 4.32E-30 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RR42_RS02390 55047f01352428a648c5feee6a4c6489 627 Gene3D G3DSA:3.40.50.300 419 589 8.0E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02390 55047f01352428a648c5feee6a4c6489 627 Pfam PF00005 ABC transporter 424 556 1.1E-15 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS02390 55047f01352428a648c5feee6a4c6489 627 Pfam PF06472 ABC transporter transmembrane region 2 28 314 5.2E-65 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RR42_RS13135 6671a116cad65ff718df15bc9736ab22 462 Gene3D G3DSA:3.30.930.10 31 211 4.7E-92 T 23-04-2016 RR42_RS13135 6671a116cad65ff718df15bc9736ab22 462 Gene3D G3DSA:3.30.930.10 247 349 4.7E-92 T 23-04-2016 RR42_RS13135 6671a116cad65ff718df15bc9736ab22 462 Gene3D G3DSA:3.40.50.800 351 454 1.7E-29 T 23-04-2016 IPR004154 Anticodon-binding RR42_RS13135 6671a116cad65ff718df15bc9736ab22 462 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 29 455 32.434 T 23-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 RR42_RS13135 6671a116cad65ff718df15bc9736ab22 462 Pfam PF13393 Histidyl-tRNA synthetase 36 338 4.9E-48 T 23-04-2016 RR42_RS13135 6671a116cad65ff718df15bc9736ab22 462 SUPERFAMILY SSF52954 354 455 1.59E-18 T 23-04-2016 IPR004154 Anticodon-binding RR42_RS13135 6671a116cad65ff718df15bc9736ab22 462 SUPERFAMILY SSF55681 32 345 8.96E-98 T 23-04-2016 RR42_RS13135 6671a116cad65ff718df15bc9736ab22 462 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 33 436 1.6E-152 T 23-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 RR42_RS13135 6671a116cad65ff718df15bc9736ab22 462 Pfam PF03129 Anticodon binding domain 359 454 7.7E-10 T 23-04-2016 IPR004154 Anticodon-binding RR42_RS13135 6671a116cad65ff718df15bc9736ab22 462 PIRSF PIRSF001549 28 450 1.6E-113 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 RR42_RS13135 6671a116cad65ff718df15bc9736ab22 462 PANTHER PTHR11476:SF9 29 461 2.5E-196 T 23-04-2016 RR42_RS13135 6671a116cad65ff718df15bc9736ab22 462 PANTHER PTHR11476 29 461 2.5E-196 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 RR42_RS00320 0a8d662b0e569c9abf64919767a3ae86 149 SUPERFAMILY SSF54631 13 143 3.92E-31 T 23-04-2016 RR42_RS00320 0a8d662b0e569c9abf64919767a3ae86 149 Pfam PF00571 CBS domain 13 60 1.8E-8 T 23-04-2016 IPR000644 CBS domain RR42_RS00320 0a8d662b0e569c9abf64919767a3ae86 149 Pfam PF00571 CBS domain 73 124 6.7E-11 T 23-04-2016 IPR000644 CBS domain RR42_RS00320 0a8d662b0e569c9abf64919767a3ae86 149 PANTHER PTHR11911:SF68 13 143 5.2E-31 T 23-04-2016 RR42_RS00320 0a8d662b0e569c9abf64919767a3ae86 149 Gene3D G3DSA:3.10.580.10 13 128 2.3E-30 T 23-04-2016 RR42_RS00320 0a8d662b0e569c9abf64919767a3ae86 149 SMART SM00116 15 62 4.8E-5 T 23-04-2016 IPR000644 CBS domain RR42_RS00320 0a8d662b0e569c9abf64919767a3ae86 149 SMART SM00116 80 127 4.1E-6 T 23-04-2016 IPR000644 CBS domain RR42_RS00320 0a8d662b0e569c9abf64919767a3ae86 149 PANTHER PTHR11911 13 143 5.2E-31 T 23-04-2016 RR42_RS16025 fd3d055f1ec490ebcb68e2689b59bf0a 596 PANTHER PTHR11814:SF112 18 199 3.3E-203 T 23-04-2016 RR42_RS16025 fd3d055f1ec490ebcb68e2689b59bf0a 596 PANTHER PTHR11814 220 582 3.3E-203 T 23-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 RR42_RS16025 fd3d055f1ec490ebcb68e2689b59bf0a 596 PANTHER PTHR11814:SF112 220 582 3.3E-203 T 23-04-2016 RR42_RS16025 fd3d055f1ec490ebcb68e2689b59bf0a 596 Gene3D G3DSA:3.30.750.24 476 580 2.2E-13 T 23-04-2016 IPR002645 STAS domain RR42_RS16025 fd3d055f1ec490ebcb68e2689b59bf0a 596 SUPERFAMILY SSF52091 476 581 3.14E-13 T 23-04-2016 IPR002645 STAS domain RR42_RS16025 fd3d055f1ec490ebcb68e2689b59bf0a 596 Pfam PF00916 Sulfate permease family 26 401 8.6E-87 T 23-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 RR42_RS16025 fd3d055f1ec490ebcb68e2689b59bf0a 596 PANTHER PTHR11814 18 199 3.3E-203 T 23-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 RR42_RS16025 fd3d055f1ec490ebcb68e2689b59bf0a 596 Pfam PF01740 STAS domain 478 578 3.4E-11 T 23-04-2016 IPR002645 STAS domain RR42_RS16405 da9e6b30132f8b569e41de57f10fbe5f 179 Pfam PF04115 Ureidoglycolate lyase 63 151 2.3E-27 T 23-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 RR42_RS16405 da9e6b30132f8b569e41de57f10fbe5f 179 SUPERFAMILY SSF51182 10 157 1.69E-34 T 23-04-2016 IPR011051 RmlC-like cupin domain RR42_RS16405 da9e6b30132f8b569e41de57f10fbe5f 179 PANTHER PTHR21221 1 152 1.4E-21 T 23-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 RR42_RS16405 da9e6b30132f8b569e41de57f10fbe5f 179 Gene3D G3DSA:2.60.120.480 10 165 6.0E-37 T 23-04-2016 IPR024060 Ureidoglycolate lyase domain GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 RR42_RS09930 81f32979488c5554d0315cf8405e7bdf 138 PANTHER PTHR33653 1 137 9.2E-32 T 23-04-2016 RR42_RS09930 81f32979488c5554d0315cf8405e7bdf 138 PANTHER PTHR33653:SF1 1 137 9.2E-32 T 23-04-2016 RR42_RS09930 81f32979488c5554d0315cf8405e7bdf 138 Pfam PF01850 PIN domain 2 122 4.8E-17 T 23-04-2016 IPR002716 PIN domain RR42_RS09930 81f32979488c5554d0315cf8405e7bdf 138 Gene3D G3DSA:3.40.50.1010 1 126 5.8E-18 T 23-04-2016 IPR029060 PIN domain-like RR42_RS09930 81f32979488c5554d0315cf8405e7bdf 138 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 135 13.002 T 23-04-2016 IPR022907 VapC family GO:0004540 RR42_RS09930 81f32979488c5554d0315cf8405e7bdf 138 SUPERFAMILY SSF88723 1 136 9.81E-31 T 23-04-2016 IPR029060 PIN domain-like RR42_RS14490 deb892982076234bfb4b650198bc5848 901 Pfam PF00694 Aconitase C-terminal domain 693 825 1.0E-40 T 23-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14490 deb892982076234bfb4b650198bc5848 901 Gene3D G3DSA:3.30.499.10 367 576 8.2E-64 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14490 deb892982076234bfb4b650198bc5848 901 PRINTS PR00415 Aconitase family signature 370 384 8.5E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14490 deb892982076234bfb4b650198bc5848 901 PRINTS PR00415 Aconitase family signature 494 507 8.5E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14490 deb892982076234bfb4b650198bc5848 901 PRINTS PR00415 Aconitase family signature 214 229 8.5E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14490 deb892982076234bfb4b650198bc5848 901 PRINTS PR00415 Aconitase family signature 147 160 8.5E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14490 deb892982076234bfb4b650198bc5848 901 PRINTS PR00415 Aconitase family signature 200 213 8.5E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14490 deb892982076234bfb4b650198bc5848 901 PRINTS PR00415 Aconitase family signature 276 289 8.5E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14490 deb892982076234bfb4b650198bc5848 901 PRINTS PR00415 Aconitase family signature 171 179 8.5E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14490 deb892982076234bfb4b650198bc5848 901 PRINTS PR00415 Aconitase family signature 290 303 8.5E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14490 deb892982076234bfb4b650198bc5848 901 PRINTS PR00415 Aconitase family signature 432 443 8.5E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14490 deb892982076234bfb4b650198bc5848 901 SUPERFAMILY SSF52016 636 899 9.22E-79 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RR42_RS14490 deb892982076234bfb4b650198bc5848 901 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 20 899 0.0 T 23-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 RR42_RS14490 deb892982076234bfb4b650198bc5848 901 Gene3D G3DSA:3.40.1060.10 247 365 1.3E-34 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14490 deb892982076234bfb4b650198bc5848 901 Gene3D G3DSA:3.30.499.10 23 246 5.4E-77 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14490 deb892982076234bfb4b650198bc5848 901 ProSitePatterns PS00450 Aconitase family signature 1. 428 444 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14490 deb892982076234bfb4b650198bc5848 901 ProSitePatterns PS01244 Aconitase family signature 2. 494 507 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14490 deb892982076234bfb4b650198bc5848 901 SUPERFAMILY SSF53732 19 625 3.27E-214 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14490 deb892982076234bfb4b650198bc5848 901 Pfam PF00330 Aconitase family (aconitate hydratase) 75 563 8.4E-177 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14490 deb892982076234bfb4b650198bc5848 901 PANTHER PTHR11670 668 713 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14490 deb892982076234bfb4b650198bc5848 901 PANTHER PTHR11670 758 901 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14490 deb892982076234bfb4b650198bc5848 901 PANTHER PTHR11670 1 391 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14490 deb892982076234bfb4b650198bc5848 901 PANTHER PTHR11670 417 651 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS14490 deb892982076234bfb4b650198bc5848 901 Gene3D G3DSA:3.20.19.10 637 899 8.4E-79 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RR42_RS14490 deb892982076234bfb4b650198bc5848 901 PANTHER PTHR11670:SF1 668 713 0.0 T 23-04-2016 RR42_RS14490 deb892982076234bfb4b650198bc5848 901 PANTHER PTHR11670:SF1 758 901 0.0 T 23-04-2016 RR42_RS14490 deb892982076234bfb4b650198bc5848 901 PANTHER PTHR11670:SF1 1 391 0.0 T 23-04-2016 RR42_RS14490 deb892982076234bfb4b650198bc5848 901 PANTHER PTHR11670:SF1 417 651 0.0 T 23-04-2016 RR42_RS07545 0fbd85265199b2975358f8f4ed8f887d 282 Pfam PF00005 ABC transporter 30 183 3.3E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS07545 0fbd85265199b2975358f8f4ed8f887d 282 SMART SM00382 37 231 2.9E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS07545 0fbd85265199b2975358f8f4ed8f887d 282 PANTHER PTHR24220:SF358 14 257 3.0E-92 T 23-04-2016 RR42_RS07545 0fbd85265199b2975358f8f4ed8f887d 282 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 232 253 2.1E-7 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RR42_RS07545 0fbd85265199b2975358f8f4ed8f887d 282 SUPERFAMILY SSF52540 11 253 8.59E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07545 0fbd85265199b2975358f8f4ed8f887d 282 Gene3D G3DSA:3.40.50.300 11 251 1.3E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07545 0fbd85265199b2975358f8f4ed8f887d 282 PANTHER PTHR24220 14 257 3.0E-92 T 23-04-2016 RR42_RS19120 0c2f5d7142c0d202435f56662676f4f0 131 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19120 0c2f5d7142c0d202435f56662676f4f0 131 SUPERFAMILY SSF64263 1 119 1.96E-52 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19120 0c2f5d7142c0d202435f56662676f4f0 131 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 5.8E-48 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19120 0c2f5d7142c0d202435f56662676f4f0 131 Pfam PF01196 Ribosomal protein L17 20 116 3.3E-37 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19120 0c2f5d7142c0d202435f56662676f4f0 131 Gene3D G3DSA:3.90.1030.10 1 117 5.9E-52 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19120 0c2f5d7142c0d202435f56662676f4f0 131 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.463 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19120 0c2f5d7142c0d202435f56662676f4f0 131 PANTHER PTHR14413 1 119 6.4E-66 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS17920 4d665c3916377e59695d1880a8ccd565 248 Gene3D G3DSA:1.10.530.10 100 202 5.6E-25 T 23-04-2016 RR42_RS17920 4d665c3916377e59695d1880a8ccd565 248 Pfam PF01464 Transglycosylase SLT domain 100 191 4.0E-16 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 RR42_RS17920 4d665c3916377e59695d1880a8ccd565 248 SUPERFAMILY SSF53955 93 207 9.7E-29 T 23-04-2016 IPR023346 Lysozyme-like domain RR42_RS17920 4d665c3916377e59695d1880a8ccd565 248 PANTHER PTHR21666 79 191 1.8E-15 T 23-04-2016 RR42_RS17185 abaf7ee132aedfba9818ddc405e1381c 88 Pfam PF01649 Ribosomal protein S20 2 84 1.1E-23 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS17185 abaf7ee132aedfba9818ddc405e1381c 88 SUPERFAMILY SSF46992 3 86 3.4E-26 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS17185 abaf7ee132aedfba9818ddc405e1381c 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 4.5E-24 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS17185 abaf7ee132aedfba9818ddc405e1381c 88 Gene3D G3DSA:1.20.58.110 1 86 9.2E-27 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS17185 abaf7ee132aedfba9818ddc405e1381c 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.31 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS17185 abaf7ee132aedfba9818ddc405e1381c 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 20 88 2.0E-19 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS17185 abaf7ee132aedfba9818ddc405e1381c 88 PANTHER PTHR33398 1 88 8.7E-27 T 23-04-2016 RR42_RS19930 cf9e48e1da182cabbf01b9b5a05d372d 572 SUPERFAMILY SSF51905 536 571 6.09E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS19930 cf9e48e1da182cabbf01b9b5a05d372d 572 SUPERFAMILY SSF51905 74 418 6.09E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS19930 cf9e48e1da182cabbf01b9b5a05d372d 572 PANTHER PTHR10742 47 571 9.1E-45 T 23-04-2016 RR42_RS19930 cf9e48e1da182cabbf01b9b5a05d372d 572 Pfam PF13450 NAD(P)-binding Rossmann-like domain 78 146 5.7E-9 T 23-04-2016 RR42_RS19930 cf9e48e1da182cabbf01b9b5a05d372d 572 PANTHER PTHR10742:SF224 47 571 9.1E-45 T 23-04-2016 RR42_RS19930 cf9e48e1da182cabbf01b9b5a05d372d 572 Gene3D G3DSA:3.50.50.60 295 401 2.2E-17 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS19930 cf9e48e1da182cabbf01b9b5a05d372d 572 Gene3D G3DSA:3.50.50.60 74 182 2.2E-17 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS13810 85824dd88d7096e9d4f8a606ff5ce772 520 Gene3D G3DSA:3.30.420.40 261 510 5.4E-100 T 23-04-2016 RR42_RS13810 85824dd88d7096e9d4f8a606ff5ce772 520 PIRSF PIRSF000538 10 514 1.2E-173 T 23-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RR42_RS13810 85824dd88d7096e9d4f8a606ff5ce772 520 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 13 258 1.7E-79 T 23-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RR42_RS13810 85824dd88d7096e9d4f8a606ff5ce772 520 SUPERFAMILY SSF53067 261 509 6.61E-83 T 23-04-2016 RR42_RS13810 85824dd88d7096e9d4f8a606ff5ce772 520 PANTHER PTHR10196:SF9 11 517 2.2E-244 T 23-04-2016 RR42_RS13810 85824dd88d7096e9d4f8a606ff5ce772 520 SUPERFAMILY SSF53067 12 261 9.97E-96 T 23-04-2016 RR42_RS13810 85824dd88d7096e9d4f8a606ff5ce772 520 Hamap MF_00186 Glycerol kinase [glpK]. 10 509 56.999 T 23-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RR42_RS13810 85824dd88d7096e9d4f8a606ff5ce772 520 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 267 462 1.2E-60 T 23-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RR42_RS13810 85824dd88d7096e9d4f8a606ff5ce772 520 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 11 508 4.0E-216 T 23-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RR42_RS13810 85824dd88d7096e9d4f8a606ff5ce772 520 Gene3D G3DSA:3.30.420.40 11 259 6.5E-101 T 23-04-2016 RR42_RS13810 85824dd88d7096e9d4f8a606ff5ce772 520 PANTHER PTHR10196 11 517 2.2E-244 T 23-04-2016 RR42_RS13810 85824dd88d7096e9d4f8a606ff5ce772 520 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 142 154 - T 23-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RR42_RS13810 85824dd88d7096e9d4f8a606ff5ce772 520 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 374 394 - T 23-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RR42_RS14405 850158adc8e8ed8aa664c95b38ccf000 233 Gene3D G3DSA:3.40.50.300 1 228 1.2E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14405 850158adc8e8ed8aa664c95b38ccf000 233 PIRSF PIRSF039137 1 233 7.7E-107 T 23-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 RR42_RS14405 850158adc8e8ed8aa664c95b38ccf000 233 PANTHER PTHR24220:SF568 3 232 9.9E-134 T 23-04-2016 RR42_RS14405 850158adc8e8ed8aa664c95b38ccf000 233 SMART SM00382 26 227 6.7E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS14405 850158adc8e8ed8aa664c95b38ccf000 233 Pfam PF00005 ABC transporter 17 161 1.7E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS14405 850158adc8e8ed8aa664c95b38ccf000 233 SUPERFAMILY SSF52540 2 228 1.25E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14405 850158adc8e8ed8aa664c95b38ccf000 233 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS14405 850158adc8e8ed8aa664c95b38ccf000 233 PANTHER PTHR24220 3 232 9.9E-134 T 23-04-2016 RR42_RS07460 f926d18d7d9750e428b89285d4bfbc21 352 Pfam PF00248 Aldo/keto reductase family 15 343 1.1E-69 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain RR42_RS07460 f926d18d7d9750e428b89285d4bfbc21 352 SUPERFAMILY SSF51430 1 348 7.33E-101 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain RR42_RS07460 f926d18d7d9750e428b89285d4bfbc21 352 PANTHER PTHR11732:SF112 1 131 5.7E-138 T 23-04-2016 RR42_RS07460 f926d18d7d9750e428b89285d4bfbc21 352 PANTHER PTHR11732:SF112 269 351 5.7E-138 T 23-04-2016 RR42_RS07460 f926d18d7d9750e428b89285d4bfbc21 352 PANTHER PTHR11732:SF112 149 252 5.7E-138 T 23-04-2016 RR42_RS07460 f926d18d7d9750e428b89285d4bfbc21 352 Gene3D G3DSA:3.20.20.100 1 349 4.2E-101 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain RR42_RS07460 f926d18d7d9750e428b89285d4bfbc21 352 PANTHER PTHR11732 1 131 5.7E-138 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta RR42_RS07460 f926d18d7d9750e428b89285d4bfbc21 352 PANTHER PTHR11732 269 351 5.7E-138 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta RR42_RS07460 f926d18d7d9750e428b89285d4bfbc21 352 PANTHER PTHR11732 149 252 5.7E-138 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta RR42_RS07450 2274bf9c45b6b10f70e2d688fec0705f 298 PANTHER PTHR32196 1 295 1.3E-129 T 23-04-2016 RR42_RS07450 2274bf9c45b6b10f70e2d688fec0705f 298 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 258 3.0E-32 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RR42_RS07450 2274bf9c45b6b10f70e2d688fec0705f 298 PANTHER PTHR32196:SF27 1 295 1.3E-129 T 23-04-2016 RR42_RS15045 de5bced003636f69e02fe44e33d357a9 442 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 346 1.1E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS15045 de5bced003636f69e02fe44e33d357a9 442 Gene3D G3DSA:3.50.50.60 8 121 1.0E-18 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS15045 de5bced003636f69e02fe44e33d357a9 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 302 324 7.3E-11 T 23-04-2016 RR42_RS15045 de5bced003636f69e02fe44e33d357a9 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 7.3E-11 T 23-04-2016 RR42_RS15045 de5bced003636f69e02fe44e33d357a9 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 179 197 7.3E-11 T 23-04-2016 RR42_RS15045 de5bced003636f69e02fe44e33d357a9 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 117 135 7.3E-11 T 23-04-2016 RR42_RS15045 de5bced003636f69e02fe44e33d357a9 442 PANTHER PTHR10632 8 362 3.1E-20 T 23-04-2016 RR42_RS15045 de5bced003636f69e02fe44e33d357a9 442 SUPERFAMILY SSF51905 6 328 2.89E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS15045 de5bced003636f69e02fe44e33d357a9 442 Gene3D G3DSA:3.50.50.60 122 348 1.7E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS15045 de5bced003636f69e02fe44e33d357a9 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 7.5E-8 T 23-04-2016 RR42_RS15045 de5bced003636f69e02fe44e33d357a9 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 179 204 7.5E-8 T 23-04-2016 RR42_RS15045 de5bced003636f69e02fe44e33d357a9 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 317 324 7.5E-8 T 23-04-2016 RR42_RS15045 de5bced003636f69e02fe44e33d357a9 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 7.5E-8 T 23-04-2016 RR42_RS16055 dfdd721a234781f74c657dd9a0eaa794 282 Pfam PF02569 Pantoate-beta-alanine ligase 3 280 8.2E-97 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 RR42_RS16055 dfdd721a234781f74c657dd9a0eaa794 282 Gene3D G3DSA:3.40.50.620 1 169 1.4E-71 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS16055 dfdd721a234781f74c657dd9a0eaa794 282 SUPERFAMILY SSF52374 1 282 1.06E-95 T 23-04-2016 RR42_RS16055 dfdd721a234781f74c657dd9a0eaa794 282 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 19 76 5.0E-8 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RR42_RS16055 dfdd721a234781f74c657dd9a0eaa794 282 Gene3D G3DSA:3.30.1300.10 172 282 2.6E-29 T 23-04-2016 RR42_RS16055 dfdd721a234781f74c657dd9a0eaa794 282 PANTHER PTHR21299 1 282 1.6E-111 T 23-04-2016 RR42_RS16055 dfdd721a234781f74c657dd9a0eaa794 282 Hamap MF_00158 Pantothenate synthetase [panC]. 2 282 37.278 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 RR42_RS16055 dfdd721a234781f74c657dd9a0eaa794 282 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 3.7E-87 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 RR42_RS16055 dfdd721a234781f74c657dd9a0eaa794 282 PANTHER PTHR21299:SF1 1 282 1.6E-111 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 RR42_RS09520 c8c1a350a16af96151920b8dfca1cd28 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 1.4E-19 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS09520 c8c1a350a16af96151920b8dfca1cd28 237 PANTHER PTHR26402:SF292 5 235 1.7E-83 T 23-04-2016 RR42_RS09520 c8c1a350a16af96151920b8dfca1cd28 237 Gene3D G3DSA:3.40.50.2300 5 134 2.0E-37 T 23-04-2016 RR42_RS09520 c8c1a350a16af96151920b8dfca1cd28 237 Pfam PF00072 Response regulator receiver domain 7 117 3.4E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS09520 c8c1a350a16af96151920b8dfca1cd28 237 PANTHER PTHR26402 5 235 1.7E-83 T 23-04-2016 RR42_RS09520 c8c1a350a16af96151920b8dfca1cd28 237 SMART SM00862 155 231 3.9E-19 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS09520 c8c1a350a16af96151920b8dfca1cd28 237 Gene3D G3DSA:1.10.10.10 135 233 1.4E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS09520 c8c1a350a16af96151920b8dfca1cd28 237 SUPERFAMILY SSF46894 131 232 3.97E-24 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS09520 c8c1a350a16af96151920b8dfca1cd28 237 SMART SM00448 5 116 2.7E-38 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS09520 c8c1a350a16af96151920b8dfca1cd28 237 SUPERFAMILY SSF52172 6 127 1.71E-37 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS19190 86970382534ad830b0496ff873f70a71 101 SUPERFAMILY SSF57716 2 101 8.55E-37 T 23-04-2016 RR42_RS19190 86970382534ad830b0496ff873f70a71 101 Gene3D G3DSA:4.10.830.10 41 101 5.5E-29 T 23-04-2016 RR42_RS19190 86970382534ad830b0496ff873f70a71 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 2.9E-25 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19190 86970382534ad830b0496ff873f70a71 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 27.425 T 23-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid RR42_RS19190 86970382534ad830b0496ff873f70a71 101 PANTHER PTHR19836 2 101 2.5E-52 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19470 24865bbfd0df589f1902ba1d3893762a 190 ProSitePatterns PS00018 EF-hand calcium-binding domain. 81 93 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site RR42_RS19470 24865bbfd0df589f1902ba1d3893762a 190 ProSitePatterns PS00018 EF-hand calcium-binding domain. 147 159 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site RR42_RS19470 24865bbfd0df589f1902ba1d3893762a 190 ProSitePatterns PS00018 EF-hand calcium-binding domain. 120 132 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site RR42_RS19470 24865bbfd0df589f1902ba1d3893762a 190 Pfam PF13202 EF hand 140 159 5.8E-5 T 23-04-2016 IPR002048 EF-hand domain GO:0005509 RR42_RS19470 24865bbfd0df589f1902ba1d3893762a 190 Pfam PF13202 EF hand 56 72 4.9E-5 T 23-04-2016 IPR002048 EF-hand domain GO:0005509 RR42_RS19470 24865bbfd0df589f1902ba1d3893762a 190 SMART SM00054 140 166 2.6 T 23-04-2016 IPR002048 EF-hand domain GO:0005509 RR42_RS19470 24865bbfd0df589f1902ba1d3893762a 190 SMART SM00054 111 139 0.02 T 23-04-2016 IPR002048 EF-hand domain GO:0005509 RR42_RS19470 24865bbfd0df589f1902ba1d3893762a 190 SMART SM00054 72 100 0.032 T 23-04-2016 IPR002048 EF-hand domain GO:0005509 RR42_RS19470 24865bbfd0df589f1902ba1d3893762a 190 Pfam PF13499 EF-hand domain pair 76 134 4.0E-9 T 23-04-2016 IPR002048 EF-hand domain GO:0005509 RR42_RS19470 24865bbfd0df589f1902ba1d3893762a 190 SUPERFAMILY SSF47473 55 167 3.82E-26 T 23-04-2016 IPR011992 EF-hand domain pair RR42_RS19470 24865bbfd0df589f1902ba1d3893762a 190 PANTHER PTHR10891 56 165 4.7E-14 T 23-04-2016 RR42_RS19470 24865bbfd0df589f1902ba1d3893762a 190 Gene3D G3DSA:1.10.238.10 55 172 2.7E-26 T 23-04-2016 IPR011992 EF-hand domain pair RR42_RS00710 9e9f501a7445a193bb20fa5145ca1b99 162 Gene3D G3DSA:3.40.50.620 28 143 1.7E-31 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS00710 9e9f501a7445a193bb20fa5145ca1b99 162 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 22 159 1.5E-59 T 23-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 RR42_RS00710 9e9f501a7445a193bb20fa5145ca1b99 162 PANTHER PTHR10739 12 160 1.9E-36 T 23-04-2016 RR42_RS00710 9e9f501a7445a193bb20fa5145ca1b99 162 SUPERFAMILY SSF52374 27 154 2.97E-21 T 23-04-2016 RR42_RS00710 9e9f501a7445a193bb20fa5145ca1b99 162 Pfam PF01467 Cytidylyltransferase-like 31 130 2.7E-15 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RR42_RS00710 9e9f501a7445a193bb20fa5145ca1b99 162 PANTHER PTHR10739:SF26 12 160 1.9E-36 T 23-04-2016 RR42_RS00710 9e9f501a7445a193bb20fa5145ca1b99 162 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 29 94 1.9E-12 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RR42_RS13315 66b78e71572bb02c1d05f1d7a9261147 420 SUPERFAMILY SSF52540 90 371 5.12E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13315 66b78e71572bb02c1d05f1d7a9261147 420 SUPERFAMILY SSF68912 1 46 5.89E-11 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RR42_RS13315 66b78e71572bb02c1d05f1d7a9261147 420 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 4.3E-31 T 23-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 RR42_RS13315 66b78e71572bb02c1d05f1d7a9261147 420 SMART SM00959 5 47 1.0E-15 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RR42_RS13315 66b78e71572bb02c1d05f1d7a9261147 420 SMART SM00382 170 349 5.5E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS13315 66b78e71572bb02c1d05f1d7a9261147 420 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 3.0E-207 T 23-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 RR42_RS13315 66b78e71572bb02c1d05f1d7a9261147 420 PANTHER PTHR15184:SF34 21 141 5.6E-182 T 23-04-2016 RR42_RS13315 66b78e71572bb02c1d05f1d7a9261147 420 PANTHER PTHR15184:SF34 160 418 5.6E-182 T 23-04-2016 RR42_RS13315 66b78e71572bb02c1d05f1d7a9261147 420 SMART SM00357 52 118 1.3E-17 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 RR42_RS13315 66b78e71572bb02c1d05f1d7a9261147 420 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 240.269 T 23-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 RR42_RS13315 66b78e71572bb02c1d05f1d7a9261147 420 Gene3D G3DSA:1.10.720.10 1 47 1.7E-19 T 23-04-2016 RR42_RS13315 66b78e71572bb02c1d05f1d7a9261147 420 SUPERFAMILY SSF50249 49 125 3.6E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS13315 66b78e71572bb02c1d05f1d7a9261147 420 Pfam PF07498 Rho termination factor, N-terminal domain 5 46 1.8E-14 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RR42_RS13315 66b78e71572bb02c1d05f1d7a9261147 420 Gene3D G3DSA:3.40.50.300 130 418 9.5E-105 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13315 66b78e71572bb02c1d05f1d7a9261147 420 Gene3D G3DSA:2.40.50.140 49 117 7.4E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS13315 66b78e71572bb02c1d05f1d7a9261147 420 PANTHER PTHR15184 21 141 5.6E-182 T 23-04-2016 RR42_RS13315 66b78e71572bb02c1d05f1d7a9261147 420 PANTHER PTHR15184 160 418 5.6E-182 T 23-04-2016 RR42_RS13315 66b78e71572bb02c1d05f1d7a9261147 420 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 4.8E-22 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RR42_RS01285 503981505995d49d34b43d7a948e9f47 553 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 291 446 1.4E-35 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS01285 503981505995d49d34b43d7a948e9f47 553 SUPERFAMILY SSF56645 53 298 8.25E-31 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RR42_RS01285 503981505995d49d34b43d7a948e9f47 553 SUPERFAMILY SSF47203 296 450 8.22E-43 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS01285 503981505995d49d34b43d7a948e9f47 553 Gene3D G3DSA:1.20.140.10 283 452 2.3E-41 T 23-04-2016 RR42_RS01285 503981505995d49d34b43d7a948e9f47 553 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 405 424 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RR42_RS01285 503981505995d49d34b43d7a948e9f47 553 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 180 280 2.4E-16 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RR42_RS01285 503981505995d49d34b43d7a948e9f47 553 Gene3D G3DSA:2.40.110.10 180 282 9.1E-19 T 23-04-2016 RR42_RS01285 503981505995d49d34b43d7a948e9f47 553 PANTHER PTHR10909 31 466 6.9E-169 T 23-04-2016 RR42_RS01285 503981505995d49d34b43d7a948e9f47 553 PANTHER PTHR10909:SF289 31 466 6.9E-169 T 23-04-2016 RR42_RS04730 1e4d25aff1be0f69cadbdb570064a5ce 422 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 420 2.0E-169 T 23-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RR42_RS04730 1e4d25aff1be0f69cadbdb570064a5ce 422 SUPERFAMILY SSF52440 1 101 1.06E-34 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RR42_RS04730 1e4d25aff1be0f69cadbdb570064a5ce 422 PANTHER PTHR10520 1 422 8.5E-258 T 23-04-2016 RR42_RS04730 1e4d25aff1be0f69cadbdb570064a5ce 422 SUPERFAMILY SSF56059 102 324 2.12E-63 T 23-04-2016 RR42_RS04730 1e4d25aff1be0f69cadbdb570064a5ce 422 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 9.1E-36 T 23-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RR42_RS04730 1e4d25aff1be0f69cadbdb570064a5ce 422 Gene3D G3DSA:3.40.50.20 2 93 4.3E-36 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RR42_RS04730 1e4d25aff1be0f69cadbdb570064a5ce 422 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 420 42.974 T 23-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RR42_RS04730 1e4d25aff1be0f69cadbdb570064a5ce 422 SMART SM01209 101 294 1.4E-134 T 23-04-2016 RR42_RS04730 1e4d25aff1be0f69cadbdb570064a5ce 422 Gene3D G3DSA:3.90.600.10 329 420 4.2E-34 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RR42_RS04730 1e4d25aff1be0f69cadbdb570064a5ce 422 SUPERFAMILY SSF51246 327 420 1.1E-30 T 23-04-2016 IPR011054 Rudiment single hybrid motif RR42_RS04730 1e4d25aff1be0f69cadbdb570064a5ce 422 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 418 6.1E-29 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RR42_RS04730 1e4d25aff1be0f69cadbdb570064a5ce 422 Gene3D G3DSA:3.30.470.20 189 326 5.1E-60 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RR42_RS04730 1e4d25aff1be0f69cadbdb570064a5ce 422 Gene3D G3DSA:3.30.1490.20 119 188 1.4E-33 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RR42_RS04730 1e4d25aff1be0f69cadbdb570064a5ce 422 SMART SM01210 328 420 5.8E-52 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RR42_RS04730 1e4d25aff1be0f69cadbdb570064a5ce 422 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 294 3.6E-75 T 23-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RR42_RS06410 ae031ec2bb07dacd83f144944536afce 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 305 320 1.7E-14 T 23-04-2016 RR42_RS06410 ae031ec2bb07dacd83f144944536afce 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 143 158 1.7E-14 T 23-04-2016 RR42_RS06410 ae031ec2bb07dacd83f144944536afce 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 1.7E-14 T 23-04-2016 RR42_RS06410 ae031ec2bb07dacd83f144944536afce 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 320 336 1.7E-14 T 23-04-2016 RR42_RS06410 ae031ec2bb07dacd83f144944536afce 407 SUPERFAMILY SSF54373 168 298 5.1E-37 T 23-04-2016 RR42_RS06410 ae031ec2bb07dacd83f144944536afce 407 Pfam PF01494 FAD binding domain 10 161 2.3E-5 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 RR42_RS06410 ae031ec2bb07dacd83f144944536afce 407 Pfam PF01494 FAD binding domain 302 367 1.9E-8 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 RR42_RS06410 ae031ec2bb07dacd83f144944536afce 407 SUPERFAMILY SSF51905 9 164 9.5E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS06410 ae031ec2bb07dacd83f144944536afce 407 SUPERFAMILY SSF51905 292 378 9.5E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS06410 ae031ec2bb07dacd83f144944536afce 407 PANTHER PTHR13789 1 183 9.6E-44 T 23-04-2016 RR42_RS06410 ae031ec2bb07dacd83f144944536afce 407 PANTHER PTHR13789 200 376 9.6E-44 T 23-04-2016 RR42_RS06410 ae031ec2bb07dacd83f144944536afce 407 Gene3D G3DSA:3.50.50.60 293 372 1.6E-26 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS06410 ae031ec2bb07dacd83f144944536afce 407 Gene3D G3DSA:3.50.50.60 8 169 1.6E-26 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS05540 953373de9d384c9d09252d60ee634cd4 792 Gene3D G3DSA:3.40.50.740 520 652 8.1E-51 T 23-04-2016 RR42_RS05540 953373de9d384c9d09252d60ee634cd4 792 Gene3D G3DSA:3.40.50.740 273 412 8.1E-51 T 23-04-2016 RR42_RS05540 953373de9d384c9d09252d60ee634cd4 792 Pfam PF00384 Molybdopterin oxidoreductase 535 628 1.1E-14 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RR42_RS05540 953373de9d384c9d09252d60ee634cd4 792 Pfam PF00384 Molybdopterin oxidoreductase 273 411 2.8E-19 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RR42_RS05540 953373de9d384c9d09252d60ee634cd4 792 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 122 2.1E-17 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 RR42_RS05540 953373de9d384c9d09252d60ee634cd4 792 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 628 2.0E-212 T 23-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 RR42_RS05540 953373de9d384c9d09252d60ee634cd4 792 SUPERFAMILY SSF54862 75 211 1.34E-36 T 23-04-2016 RR42_RS05540 953373de9d384c9d09252d60ee634cd4 792 SMART SM00929 83 123 1.6E-21 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 RR42_RS05540 953373de9d384c9d09252d60ee634cd4 792 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 23-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 RR42_RS05540 953373de9d384c9d09252d60ee634cd4 792 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 23-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 RR42_RS05540 953373de9d384c9d09252d60ee634cd4 792 PANTHER PTHR11615:SF115 441 664 1.7E-166 T 23-04-2016 RR42_RS05540 953373de9d384c9d09252d60ee634cd4 792 PANTHER PTHR11615:SF115 3 400 1.7E-166 T 23-04-2016 RR42_RS05540 953373de9d384c9d09252d60ee634cd4 792 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 1 76 1.8E-18 T 23-04-2016 RR42_RS05540 953373de9d384c9d09252d60ee634cd4 792 SUPERFAMILY SSF54292 1 74 4.18E-20 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS05540 953373de9d384c9d09252d60ee634cd4 792 Pfam PF01568 Molydopterin dinucleotide binding domain 699 776 1.4E-5 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RR42_RS05540 953373de9d384c9d09252d60ee634cd4 792 SUPERFAMILY SSF53706 214 653 3.99E-93 T 23-04-2016 RR42_RS05540 953373de9d384c9d09252d60ee634cd4 792 SUPERFAMILY SSF50692 704 773 9.27E-5 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain RR42_RS05540 953373de9d384c9d09252d60ee634cd4 792 PANTHER PTHR11615 441 664 1.7E-166 T 23-04-2016 RR42_RS05540 953373de9d384c9d09252d60ee634cd4 792 PANTHER PTHR11615 3 400 1.7E-166 T 23-04-2016 RR42_RS05540 953373de9d384c9d09252d60ee634cd4 792 Gene3D G3DSA:2.40.40.20 697 756 3.5E-4 T 23-04-2016 RR42_RS05540 953373de9d384c9d09252d60ee634cd4 792 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 146 156 - T 23-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 RR42_RS05540 953373de9d384c9d09252d60ee634cd4 792 Gene3D G3DSA:3.10.20.30 2 60 1.7E-7 T 23-04-2016 IPR012675 Beta-grasp domain RR42_RS09390 0c76f3bc8dbb10264396bc102bb8923e 900 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 851 867 4.6E-6 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS09390 0c76f3bc8dbb10264396bc102bb8923e 900 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 837 851 4.6E-6 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS09390 0c76f3bc8dbb10264396bc102bb8923e 900 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 867 879 4.6E-6 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS09390 0c76f3bc8dbb10264396bc102bb8923e 900 SMART SM00421 834 891 9.5E-16 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS09390 0c76f3bc8dbb10264396bc102bb8923e 900 Pfam PF00196 Bacterial regulatory proteins, luxR family 835 891 1.9E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS09390 0c76f3bc8dbb10264396bc102bb8923e 900 Gene3D G3DSA:1.10.10.10 832 896 5.1E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS09390 0c76f3bc8dbb10264396bc102bb8923e 900 SUPERFAMILY SSF46894 830 897 2.93E-16 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS09390 0c76f3bc8dbb10264396bc102bb8923e 900 SUPERFAMILY SSF52540 132 243 6.51E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS09390 0c76f3bc8dbb10264396bc102bb8923e 900 SUPERFAMILY SSF52540 47 102 6.51E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS09390 0c76f3bc8dbb10264396bc102bb8923e 900 SMART SM00382 43 212 0.0079 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS09390 0c76f3bc8dbb10264396bc102bb8923e 900 Gene3D G3DSA:3.40.50.300 51 207 3.1E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS09390 0c76f3bc8dbb10264396bc102bb8923e 900 Gene3D G3DSA:1.25.40.10 454 799 6.3E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS18840 9116ed59d9edc4b0a9c55f2ff4cd6259 397 Gene3D G3DSA:2.40.10.10 61 177 1.1E-39 T 23-04-2016 RR42_RS18840 9116ed59d9edc4b0a9c55f2ff4cd6259 397 SUPERFAMILY SSF50156 248 371 1.58E-25 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS18840 9116ed59d9edc4b0a9c55f2ff4cd6259 397 PANTHER PTHR22939 62 91 5.3E-133 T 23-04-2016 RR42_RS18840 9116ed59d9edc4b0a9c55f2ff4cd6259 397 PANTHER PTHR22939 107 384 5.3E-133 T 23-04-2016 RR42_RS18840 9116ed59d9edc4b0a9c55f2ff4cd6259 397 Gene3D G3DSA:2.30.42.10 291 385 2.1E-29 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS18840 9116ed59d9edc4b0a9c55f2ff4cd6259 397 PRINTS PR00834 HtrA/DegQ protease family signature 329 341 2.6E-56 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS18840 9116ed59d9edc4b0a9c55f2ff4cd6259 397 PRINTS PR00834 HtrA/DegQ protease family signature 186 210 2.6E-56 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS18840 9116ed59d9edc4b0a9c55f2ff4cd6259 397 PRINTS PR00834 HtrA/DegQ protease family signature 243 260 2.6E-56 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS18840 9116ed59d9edc4b0a9c55f2ff4cd6259 397 PRINTS PR00834 HtrA/DegQ protease family signature 146 166 2.6E-56 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS18840 9116ed59d9edc4b0a9c55f2ff4cd6259 397 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 2.6E-56 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS18840 9116ed59d9edc4b0a9c55f2ff4cd6259 397 PRINTS PR00834 HtrA/DegQ protease family signature 125 137 2.6E-56 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS18840 9116ed59d9edc4b0a9c55f2ff4cd6259 397 SMART SM00228 289 371 2.0E-14 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS18840 9116ed59d9edc4b0a9c55f2ff4cd6259 397 SUPERFAMILY SSF50494 62 285 1.12E-65 T 23-04-2016 IPR009003 Peptidase S1, PA clan RR42_RS18840 9116ed59d9edc4b0a9c55f2ff4cd6259 397 Gene3D G3DSA:2.40.10.10 178 290 7.2E-43 T 23-04-2016 RR42_RS18840 9116ed59d9edc4b0a9c55f2ff4cd6259 397 PANTHER PTHR22939:SF93 62 91 5.3E-133 T 23-04-2016 RR42_RS18840 9116ed59d9edc4b0a9c55f2ff4cd6259 397 PANTHER PTHR22939:SF93 107 384 5.3E-133 T 23-04-2016 RR42_RS18840 9116ed59d9edc4b0a9c55f2ff4cd6259 397 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 62 383 8.9E-133 T 23-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 RR42_RS18840 9116ed59d9edc4b0a9c55f2ff4cd6259 397 Pfam PF13180 PDZ domain 289 378 1.3E-16 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS18840 9116ed59d9edc4b0a9c55f2ff4cd6259 397 Pfam PF13365 Trypsin-like peptidase domain 116 250 4.5E-34 T 23-04-2016 RR42_RS13910 bb7736ec6cc582d7322db152d1e843d6 270 SUPERFAMILY SSF53681 5 106 5.56E-35 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS13910 bb7736ec6cc582d7322db152d1e843d6 270 Hamap MF_00258 Glutamate racemase [murI]. 4 255 35.638 T 23-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS13910 bb7736ec6cc582d7322db152d1e843d6 270 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 179 189 - T 23-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS13910 bb7736ec6cc582d7322db152d1e843d6 270 PANTHER PTHR21198 2 263 2.5E-85 T 23-04-2016 RR42_RS13910 bb7736ec6cc582d7322db152d1e843d6 270 PANTHER PTHR21198:SF2 2 263 2.5E-85 T 23-04-2016 RR42_RS13910 bb7736ec6cc582d7322db152d1e843d6 270 Pfam PF01177 Asp/Glu/Hydantoin racemase 6 214 3.5E-38 T 23-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS13910 bb7736ec6cc582d7322db152d1e843d6 270 Gene3D G3DSA:3.40.50.1860 3 172 6.9E-52 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS13910 bb7736ec6cc582d7322db152d1e843d6 270 TIGRFAM TIGR00067 glut_race: glutamate racemase 6 245 9.9E-64 T 23-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS13910 bb7736ec6cc582d7322db152d1e843d6 270 SUPERFAMILY SSF53681 108 259 1.8E-32 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS17550 79a13c2f0d8ddf88ab3279dc19e96659 265 Gene3D G3DSA:3.40.50.720 1 161 1.0E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS17550 79a13c2f0d8ddf88ab3279dc19e96659 265 SUPERFAMILY SSF55347 125 234 2.83E-37 T 23-04-2016 RR42_RS17550 79a13c2f0d8ddf88ab3279dc19e96659 265 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 263 34.099 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS17550 79a13c2f0d8ddf88ab3279dc19e96659 265 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 126 262 2.3E-44 T 23-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS17550 79a13c2f0d8ddf88ab3279dc19e96659 265 SUPERFAMILY SSF51735 234 264 1.34E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS17550 79a13c2f0d8ddf88ab3279dc19e96659 265 SUPERFAMILY SSF51735 1 124 1.34E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS17550 79a13c2f0d8ddf88ab3279dc19e96659 265 PIRSF PIRSF000161 1 265 9.4E-83 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS17550 79a13c2f0d8ddf88ab3279dc19e96659 265 PANTHER PTHR20836:SF0 1 264 8.8E-92 T 23-04-2016 RR42_RS17550 79a13c2f0d8ddf88ab3279dc19e96659 265 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 123 7.6E-35 T 23-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS17550 79a13c2f0d8ddf88ab3279dc19e96659 265 PANTHER PTHR20836 1 264 8.8E-92 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS17550 79a13c2f0d8ddf88ab3279dc19e96659 265 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 148 165 - T 23-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS17550 79a13c2f0d8ddf88ab3279dc19e96659 265 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 263 1.4E-95 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS09600 7e37e111a9debe69bcc7b05a75a8c37f 214 Gene3D G3DSA:3.40.50.2300 2 119 1.5E-34 T 23-04-2016 RR42_RS09600 7e37e111a9debe69bcc7b05a75a8c37f 214 PANTHER PTHR26402 2 207 3.6E-64 T 23-04-2016 RR42_RS09600 7e37e111a9debe69bcc7b05a75a8c37f 214 SUPERFAMILY SSF46894 140 209 6.12E-17 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS09600 7e37e111a9debe69bcc7b05a75a8c37f 214 PANTHER PTHR26402:SF458 2 207 3.6E-64 T 23-04-2016 RR42_RS09600 7e37e111a9debe69bcc7b05a75a8c37f 214 SMART SM00448 2 115 9.0E-33 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS09600 7e37e111a9debe69bcc7b05a75a8c37f 214 SUPERFAMILY SSF52172 1 128 8.25E-34 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS09600 7e37e111a9debe69bcc7b05a75a8c37f 214 SMART SM00421 146 203 2.3E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS09600 7e37e111a9debe69bcc7b05a75a8c37f 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 8.1E-15 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS09600 7e37e111a9debe69bcc7b05a75a8c37f 214 Pfam PF00072 Response regulator receiver domain 4 115 2.3E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS09600 7e37e111a9debe69bcc7b05a75a8c37f 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 6.3E-8 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS09600 7e37e111a9debe69bcc7b05a75a8c37f 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 6.3E-8 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS09600 7e37e111a9debe69bcc7b05a75a8c37f 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 6.3E-8 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS09600 7e37e111a9debe69bcc7b05a75a8c37f 214 Gene3D G3DSA:1.10.10.10 120 209 1.5E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS18305 307e8a55cd246502b0eec401100c8a21 342 PANTHER PTHR11922:SF5 1 340 5.7E-114 T 23-04-2016 RR42_RS18305 307e8a55cd246502b0eec401100c8a21 342 Gene3D G3DSA:1.20.970.10 6 72 4.2E-27 T 23-04-2016 RR42_RS18305 307e8a55cd246502b0eec401100c8a21 342 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 337 37.436 T 23-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 RR42_RS18305 307e8a55cd246502b0eec401100c8a21 342 SUPERFAMILY SSF52418 78 340 1.57E-98 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RR42_RS18305 307e8a55cd246502b0eec401100c8a21 342 Pfam PF00591 Glycosyl transferase family, a/b domain 77 327 5.1E-94 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RR42_RS18305 307e8a55cd246502b0eec401100c8a21 342 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 10 336 2.4E-127 T 23-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 RR42_RS18305 307e8a55cd246502b0eec401100c8a21 342 PANTHER PTHR11922 1 340 5.7E-114 T 23-04-2016 RR42_RS18305 307e8a55cd246502b0eec401100c8a21 342 SUPERFAMILY SSF47648 4 71 8.5E-17 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain RR42_RS18305 307e8a55cd246502b0eec401100c8a21 342 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 68 1.8E-12 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain RR42_RS18305 307e8a55cd246502b0eec401100c8a21 342 Gene3D G3DSA:3.40.1030.10 76 340 2.9E-108 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RR42_RS18675 9d051682a54612367227050a1b2ad22c 1110 Pfam PF04851 Type III restriction enzyme, res subunit 298 496 8.3E-18 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RR42_RS18675 9d051682a54612367227050a1b2ad22c 1110 PANTHER PTHR30195 449 639 5.7E-192 T 23-04-2016 RR42_RS18675 9d051682a54612367227050a1b2ad22c 1110 PANTHER PTHR30195 673 994 5.7E-192 T 23-04-2016 RR42_RS18675 9d051682a54612367227050a1b2ad22c 1110 PANTHER PTHR30195 19 428 5.7E-192 T 23-04-2016 RR42_RS18675 9d051682a54612367227050a1b2ad22c 1110 Gene3D G3DSA:3.40.50.300 295 509 3.0E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18675 9d051682a54612367227050a1b2ad22c 1110 SUPERFAMILY SSF52540 456 532 5.98E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18675 9d051682a54612367227050a1b2ad22c 1110 SUPERFAMILY SSF52540 403 414 5.98E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18675 9d051682a54612367227050a1b2ad22c 1110 SUPERFAMILY SSF52540 683 773 5.98E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18675 9d051682a54612367227050a1b2ad22c 1110 SUPERFAMILY SSF52540 586 622 5.98E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18675 9d051682a54612367227050a1b2ad22c 1110 SUPERFAMILY SSF52540 451 522 6.84E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18675 9d051682a54612367227050a1b2ad22c 1110 SUPERFAMILY SSF52540 248 417 6.84E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18675 9d051682a54612367227050a1b2ad22c 1110 PANTHER PTHR30195:SF15 449 639 5.7E-192 T 23-04-2016 RR42_RS18675 9d051682a54612367227050a1b2ad22c 1110 PANTHER PTHR30195:SF15 673 994 5.7E-192 T 23-04-2016 RR42_RS18675 9d051682a54612367227050a1b2ad22c 1110 PANTHER PTHR30195:SF15 19 428 5.7E-192 T 23-04-2016 RR42_RS18675 9d051682a54612367227050a1b2ad22c 1110 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 7 790 1.2E-122 T 23-04-2016 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 RR42_RS18675 9d051682a54612367227050a1b2ad22c 1110 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 8 224 1.1E-31 T 23-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 RR42_RS18675 9d051682a54612367227050a1b2ad22c 1110 SMART SM00487 294 532 6.2E-8 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RR42_RS13620 4bed8f53e096e8755b873483a1513acf 158 PANTHER PTHR11908:SF66 2 146 5.5E-44 T 23-04-2016 RR42_RS13620 4bed8f53e096e8755b873483a1513acf 158 PANTHER PTHR11908 2 146 5.5E-44 T 23-04-2016 RR42_RS13620 4bed8f53e096e8755b873483a1513acf 158 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 62 1.6E-7 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS13620 4bed8f53e096e8755b873483a1513acf 158 SUPERFAMILY SSF54292 3 91 9.57E-27 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS13620 4bed8f53e096e8755b873483a1513acf 158 Gene3D G3DSA:3.10.20.30 3 77 3.4E-29 T 23-04-2016 IPR012675 Beta-grasp domain RR42_RS13620 4bed8f53e096e8755b873483a1513acf 158 Pfam PF01799 [2Fe-2S] binding domain 76 148 3.1E-29 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RR42_RS13620 4bed8f53e096e8755b873483a1513acf 158 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 42 50 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RR42_RS13620 4bed8f53e096e8755b873483a1513acf 158 SUPERFAMILY SSF47741 87 156 2.75E-31 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RR42_RS13620 4bed8f53e096e8755b873483a1513acf 158 Gene3D G3DSA:1.10.150.120 78 157 3.9E-34 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RR42_RS15475 98ebd14ab25d907a059c58d661d01ef2 227 Pfam PF01618 MotA/TolQ/ExbB proton channel family 84 212 1.1E-41 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RR42_RS15475 98ebd14ab25d907a059c58d661d01ef2 227 PANTHER PTHR30625 8 225 1.1E-67 T 23-04-2016 RR42_RS15475 98ebd14ab25d907a059c58d661d01ef2 227 PANTHER PTHR30625:SF3 8 225 1.1E-67 T 23-04-2016 RR42_RS15475 98ebd14ab25d907a059c58d661d01ef2 227 TIGRFAM TIGR02796 tolQ: protein TolQ 11 224 7.6E-87 T 23-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 RR42_RS10665 4ca192c4c291fd658b6956e79f3aa56f 384 SUPERFAMILY SSF51230 1 94 1.28E-22 T 23-04-2016 IPR011053 Single hybrid motif RR42_RS10665 4ca192c4c291fd658b6956e79f3aa56f 384 Pfam PF02817 e3 binding domain 116 149 3.2E-6 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RR42_RS10665 4ca192c4c291fd658b6956e79f3aa56f 384 Gene3D G3DSA:3.30.559.10 164 382 1.5E-52 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain RR42_RS10665 4ca192c4c291fd658b6956e79f3aa56f 384 Pfam PF00364 Biotin-requiring enzyme 3 74 8.3E-16 T 23-04-2016 IPR000089 Biotin/lipoyl attachment RR42_RS10665 4ca192c4c291fd658b6956e79f3aa56f 384 PANTHER PTHR23151:SF9 1 382 7.7E-76 T 23-04-2016 RR42_RS10665 4ca192c4c291fd658b6956e79f3aa56f 384 SUPERFAMILY SSF52777 164 382 1.16E-54 T 23-04-2016 RR42_RS10665 4ca192c4c291fd658b6956e79f3aa56f 384 Gene3D G3DSA:2.40.50.100 1 93 4.0E-23 T 23-04-2016 RR42_RS10665 4ca192c4c291fd658b6956e79f3aa56f 384 SUPERFAMILY SSF47005 109 153 1.7E-7 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RR42_RS10665 4ca192c4c291fd658b6956e79f3aa56f 384 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 164 382 2.2E-56 T 23-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 RR42_RS10665 4ca192c4c291fd658b6956e79f3aa56f 384 PANTHER PTHR23151 1 382 7.7E-76 T 23-04-2016 RR42_RS10665 4ca192c4c291fd658b6956e79f3aa56f 384 Gene3D G3DSA:4.10.320.10 113 160 5.0E-10 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RR42_RS06470 2698087e9f3acf0480ef78a2313b820d 148 PANTHER PTHR11911 1 140 2.4E-26 T 23-04-2016 RR42_RS06470 2698087e9f3acf0480ef78a2313b820d 148 SUPERFAMILY SSF54631 1 143 8.21E-29 T 23-04-2016 RR42_RS06470 2698087e9f3acf0480ef78a2313b820d 148 Gene3D G3DSA:3.10.580.10 1 127 2.0E-27 T 23-04-2016 RR42_RS06470 2698087e9f3acf0480ef78a2313b820d 148 Pfam PF00571 CBS domain 73 125 2.2E-8 T 23-04-2016 IPR000644 CBS domain RR42_RS06470 2698087e9f3acf0480ef78a2313b820d 148 Pfam PF00571 CBS domain 15 59 2.1E-7 T 23-04-2016 IPR000644 CBS domain RR42_RS06470 2698087e9f3acf0480ef78a2313b820d 148 SMART SM00116 78 125 0.008 T 23-04-2016 IPR000644 CBS domain RR42_RS06470 2698087e9f3acf0480ef78a2313b820d 148 SMART SM00116 13 60 4.8E-8 T 23-04-2016 IPR000644 CBS domain RR42_RS19815 b16bb99e5b31a671d876f6f3295ddb57 272 Gene3D G3DSA:3.90.226.10 3 269 7.6E-70 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS19815 b16bb99e5b31a671d876f6f3295ddb57 272 SUPERFAMILY SSF52096 6 269 1.41E-71 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS19815 b16bb99e5b31a671d876f6f3295ddb57 272 PANTHER PTHR11941 1 268 8.4E-113 T 23-04-2016 RR42_RS19815 b16bb99e5b31a671d876f6f3295ddb57 272 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 114 134 - T 23-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RR42_RS19815 b16bb99e5b31a671d876f6f3295ddb57 272 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 269 1.8E-37 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RR42_RS19815 b16bb99e5b31a671d876f6f3295ddb57 272 PANTHER PTHR11941:SF65 1 268 8.4E-113 T 23-04-2016 RR42_RS06780 6ec782ea191fcc2e18b3ddc11b73ee04 438 Gene3D G3DSA:3.40.50.150 7 192 2.0E-80 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS06780 6ec782ea191fcc2e18b3ddc11b73ee04 438 Gene3D G3DSA:3.40.50.150 225 247 2.0E-80 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS06780 6ec782ea191fcc2e18b3ddc11b73ee04 438 Gene3D G3DSA:3.40.50.150 340 417 2.0E-80 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS06780 6ec782ea191fcc2e18b3ddc11b73ee04 438 Pfam PF01555 DNA methylase 24 409 6.9E-30 T 23-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 RR42_RS06780 6ec782ea191fcc2e18b3ddc11b73ee04 438 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 27 33 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RR42_RS06780 6ec782ea191fcc2e18b3ddc11b73ee04 438 PANTHER PTHR13370 352 414 6.9E-18 T 23-04-2016 RR42_RS06780 6ec782ea191fcc2e18b3ddc11b73ee04 438 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 352 369 1.2E-21 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RR42_RS06780 6ec782ea191fcc2e18b3ddc11b73ee04 438 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 394 414 1.2E-21 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RR42_RS06780 6ec782ea191fcc2e18b3ddc11b73ee04 438 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 23 37 1.2E-21 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RR42_RS06780 6ec782ea191fcc2e18b3ddc11b73ee04 438 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 371 389 1.2E-21 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RR42_RS06780 6ec782ea191fcc2e18b3ddc11b73ee04 438 SUPERFAMILY SSF53335 6 37 3.51E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS06780 6ec782ea191fcc2e18b3ddc11b73ee04 438 SUPERFAMILY SSF53335 333 414 3.51E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS06780 6ec782ea191fcc2e18b3ddc11b73ee04 438 SUPERFAMILY SSF53335 65 163 3.51E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS06500 e5ff9a0557b95b866956b2c78e614a54 232 SMART SM00345 14 73 6.7E-24 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS06500 e5ff9a0557b95b866956b2c78e614a54 232 Pfam PF07729 FCD domain 96 220 1.0E-24 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS06500 e5ff9a0557b95b866956b2c78e614a54 232 SMART SM00895 96 222 9.7E-26 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS06500 e5ff9a0557b95b866956b2c78e614a54 232 SUPERFAMILY SSF48008 95 227 4.18E-27 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS06500 e5ff9a0557b95b866956b2c78e614a54 232 Gene3D G3DSA:1.20.120.530 95 227 3.9E-30 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS06500 e5ff9a0557b95b866956b2c78e614a54 232 SUPERFAMILY SSF46785 6 77 2.45E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS06500 e5ff9a0557b95b866956b2c78e614a54 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 1.2E-21 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS06500 e5ff9a0557b95b866956b2c78e614a54 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 1.0E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS06500 e5ff9a0557b95b866956b2c78e614a54 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 1.0E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS06500 e5ff9a0557b95b866956b2c78e614a54 232 PANTHER PTHR11751 13 112 2.7E-26 T 23-04-2016 RR42_RS06500 e5ff9a0557b95b866956b2c78e614a54 232 Gene3D G3DSA:1.10.10.10 6 76 2.0E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS12460 afda00aecd4bcf9c34454368556aa186 309 Pfam PF01575 MaoC like domain 2 92 2.5E-15 T 23-04-2016 IPR002539 MaoC-like domain RR42_RS12460 afda00aecd4bcf9c34454368556aa186 309 SUPERFAMILY SSF54637 4 106 4.98E-22 T 23-04-2016 IPR029069 HotDog domain RR42_RS12460 afda00aecd4bcf9c34454368556aa186 309 Gene3D G3DSA:3.10.129.10 3 111 5.1E-25 T 23-04-2016 IPR029069 HotDog domain RR42_RS12460 afda00aecd4bcf9c34454368556aa186 309 Gene3D G3DSA:3.10.129.10 169 297 2.3E-27 T 23-04-2016 IPR029069 HotDog domain RR42_RS12460 afda00aecd4bcf9c34454368556aa186 309 SUPERFAMILY SSF54637 170 298 3.18E-25 T 23-04-2016 IPR029069 HotDog domain RR42_RS12460 afda00aecd4bcf9c34454368556aa186 309 PANTHER PTHR13078 168 298 5.7E-20 T 23-04-2016 RR42_RS13110 cb0afe0d4dedb329b35a0ac8c473f191 415 Pfam PF16360 GTP-binding GTPase Middle Region 117 196 4.1E-25 T 23-04-2016 IPR032305 GTP-binding protein, middle domain RR42_RS13110 cb0afe0d4dedb329b35a0ac8c473f191 415 Gene3D G3DSA:3.40.50.300 201 368 3.1E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13110 cb0afe0d4dedb329b35a0ac8c473f191 415 Hamap MF_00900 GTPase HflX [hflX]. 30 403 45.81 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 RR42_RS13110 cb0afe0d4dedb329b35a0ac8c473f191 415 SUPERFAMILY SSF52540 202 371 7.32E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13110 cb0afe0d4dedb329b35a0ac8c473f191 415 PANTHER PTHR10229 13 366 3.9E-153 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 RR42_RS13110 cb0afe0d4dedb329b35a0ac8c473f191 415 PANTHER PTHR10229:SF0 13 366 3.9E-153 T 23-04-2016 RR42_RS13110 cb0afe0d4dedb329b35a0ac8c473f191 415 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 13 366 1.4E-146 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 RR42_RS13110 cb0afe0d4dedb329b35a0ac8c473f191 415 Pfam PF13167 GTP-binding GTPase N-terminal 28 114 5.5E-31 T 23-04-2016 IPR025121 GTPase HflX, N-terminal RR42_RS13110 cb0afe0d4dedb329b35a0ac8c473f191 415 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 204 224 1.3E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RR42_RS13110 cb0afe0d4dedb329b35a0ac8c473f191 415 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 271 289 1.3E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RR42_RS13110 cb0afe0d4dedb329b35a0ac8c473f191 415 Pfam PF01926 50S ribosome-binding GTPase 204 322 2.7E-22 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RR42_RS13110 cb0afe0d4dedb329b35a0ac8c473f191 415 PIRSF PIRSF006809 4 374 7.6E-141 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 RR42_RS08970 9a5621ad9b1d906f25c57871e154cc10 126 Gene3D G3DSA:1.10.260.40 66 125 6.8E-16 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS08970 9a5621ad9b1d906f25c57871e154cc10 126 SMART SM00530 65 120 2.0E-11 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RR42_RS08970 9a5621ad9b1d906f25c57871e154cc10 126 SUPERFAMILY SSF47413 66 124 5.9E-14 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS08970 9a5621ad9b1d906f25c57871e154cc10 126 Pfam PF13560 Helix-turn-helix domain 67 118 6.3E-12 T 23-04-2016 RR42_RS00545 c3c7c713cc9316e8774500c07ca88748 308 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 19 97 4.4E-20 T 23-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal RR42_RS00545 c3c7c713cc9316e8774500c07ca88748 308 SMART SM00460 193 263 4.4E-19 T 23-04-2016 IPR002931 Transglutaminase-like RR42_RS00545 c3c7c713cc9316e8774500c07ca88748 308 SUPERFAMILY SSF54001 132 298 6.03E-41 T 23-04-2016 RR42_RS00545 c3c7c713cc9316e8774500c07ca88748 308 Pfam PF01841 Transglutaminase-like superfamily 166 261 3.5E-20 T 23-04-2016 IPR002931 Transglutaminase-like RR42_RS00545 c3c7c713cc9316e8774500c07ca88748 308 PANTHER PTHR33490 21 308 2.1E-65 T 23-04-2016 RR42_RS00545 c3c7c713cc9316e8774500c07ca88748 308 Gene3D G3DSA:3.90.260.10 172 268 1.8E-14 T 23-04-2016 IPR002931 Transglutaminase-like RR42_RS00545 c3c7c713cc9316e8774500c07ca88748 308 PANTHER PTHR33490:SF6 21 308 2.1E-65 T 23-04-2016 RR42_RS19925 912203007522739037337f29dbc1df9f 503 PANTHER PTHR11558 227 501 3.4E-80 T 23-04-2016 RR42_RS19925 912203007522739037337f29dbc1df9f 503 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 285 298 - T 23-04-2016 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 RR42_RS19925 912203007522739037337f29dbc1df9f 503 SUPERFAMILY SSF53335 206 476 1.89E-67 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS19925 912203007522739037337f29dbc1df9f 503 Gene3D G3DSA:3.40.50.150 260 476 1.9E-66 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS19925 912203007522739037337f29dbc1df9f 503 PANTHER PTHR11558:SF26 227 501 3.4E-80 T 23-04-2016 RR42_RS19925 912203007522739037337f29dbc1df9f 503 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 218 481 24.024 T 23-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 RR42_RS19925 912203007522739037337f29dbc1df9f 503 Pfam PF01564 Spermine/spermidine synthase 227 441 4.4E-41 T 23-04-2016 RR42_RS16560 1e643491a4f57a4f6834c25276d111db 403 Pfam PF02515 CoA-transferase family III 11 380 6.0E-112 T 23-04-2016 IPR003673 CoA-transferase family III GO:0003824 RR42_RS16560 1e643491a4f57a4f6834c25276d111db 403 PANTHER PTHR24023 59 391 1.3E-16 T 23-04-2016 RR42_RS16560 1e643491a4f57a4f6834c25276d111db 403 PANTHER PTHR24023:SF577 59 391 1.3E-16 T 23-04-2016 RR42_RS16560 1e643491a4f57a4f6834c25276d111db 403 Gene3D G3DSA:3.40.50.10540 313 403 8.3E-94 T 23-04-2016 IPR023606 CoA-transferase family III domain RR42_RS16560 1e643491a4f57a4f6834c25276d111db 403 Gene3D G3DSA:3.40.50.10540 8 223 8.3E-94 T 23-04-2016 IPR023606 CoA-transferase family III domain RR42_RS16560 1e643491a4f57a4f6834c25276d111db 403 Gene3D G3DSA:3.30.1540.10 229 312 1.0E-29 T 23-04-2016 RR42_RS16560 1e643491a4f57a4f6834c25276d111db 403 SUPERFAMILY SSF89796 9 403 4.97E-120 T 23-04-2016 IPR023606 CoA-transferase family III domain RR42_RS00340 e2bf6a9d105ccac97e329986c1671cfe 208 Pfam PF00043 Glutathione S-transferase, C-terminal domain 107 194 5.3E-15 T 23-04-2016 IPR004046 Glutathione S-transferase, C-terminal RR42_RS00340 e2bf6a9d105ccac97e329986c1671cfe 208 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 82 7.3E-8 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RR42_RS00340 e2bf6a9d105ccac97e329986c1671cfe 208 PANTHER PTHR11260 1 200 7.9E-60 T 23-04-2016 RR42_RS00340 e2bf6a9d105ccac97e329986c1671cfe 208 Gene3D G3DSA:1.20.1050.10 92 193 1.9E-31 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS00340 e2bf6a9d105ccac97e329986c1671cfe 208 PANTHER PTHR11260:SF154 1 200 7.9E-60 T 23-04-2016 RR42_RS00340 e2bf6a9d105ccac97e329986c1671cfe 208 SUPERFAMILY SSF52833 1 88 1.83E-14 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS00340 e2bf6a9d105ccac97e329986c1671cfe 208 Gene3D G3DSA:3.40.30.10 1 91 2.3E-22 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS00340 e2bf6a9d105ccac97e329986c1671cfe 208 SUPERFAMILY SSF47616 85 200 6.4E-25 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS13220 4de706b762f9984056ce890753a308f0 484 PANTHER PTHR24423:SF474 1 8 6.3E-70 T 23-04-2016 RR42_RS13220 4de706b762f9984056ce890753a308f0 484 PANTHER PTHR24423:SF474 182 458 6.3E-70 T 23-04-2016 RR42_RS13220 4de706b762f9984056ce890753a308f0 484 SMART SM00388 241 306 7.2E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS13220 4de706b762f9984056ce890753a308f0 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 458 5.6E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS13220 4de706b762f9984056ce890753a308f0 484 SUPERFAMILY SSF47384 224 305 1.28E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS13220 4de706b762f9984056ce890753a308f0 484 Gene3D G3DSA:1.10.287.130 233 302 7.3E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS13220 4de706b762f9984056ce890753a308f0 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 2.1E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS13220 4de706b762f9984056ce890753a308f0 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 2.1E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS13220 4de706b762f9984056ce890753a308f0 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 2.1E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS13220 4de706b762f9984056ce890753a308f0 484 Pfam PF08521 Two-component sensor kinase N-terminal 18 164 2.7E-42 T 23-04-2016 IPR013727 Two-component sensor kinase, N-terminal RR42_RS13220 4de706b762f9984056ce890753a308f0 484 SUPERFAMILY SSF55874 296 459 8.12E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS13220 4de706b762f9984056ce890753a308f0 484 Pfam PF00512 His Kinase A (phospho-acceptor) domain 242 304 9.1E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS13220 4de706b762f9984056ce890753a308f0 484 Gene3D G3DSA:3.30.565.10 315 461 1.3E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS13220 4de706b762f9984056ce890753a308f0 484 PANTHER PTHR24423 1 8 6.3E-70 T 23-04-2016 RR42_RS13220 4de706b762f9984056ce890753a308f0 484 PANTHER PTHR24423 182 458 6.3E-70 T 23-04-2016 RR42_RS13220 4de706b762f9984056ce890753a308f0 484 SMART SM00387 352 462 4.3E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS13220 4de706b762f9984056ce890753a308f0 484 Pfam PF00672 HAMP domain 175 237 5.0E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS09205 0873672a91cad9cc11c2a9758e4342c9 200 PANTHER PTHR10422 20 156 6.3E-28 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS09205 0873672a91cad9cc11c2a9758e4342c9 200 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 12 147 1.2E-38 T 23-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO RR42_RS09205 0873672a91cad9cc11c2a9758e4342c9 200 PANTHER PTHR10422:SF23 20 156 6.3E-28 T 23-04-2016 RR42_RS09205 0873672a91cad9cc11c2a9758e4342c9 200 SUPERFAMILY SSF46626 14 184 1.95E-20 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS09205 0873672a91cad9cc11c2a9758e4342c9 200 Gene3D G3DSA:1.10.760.10 14 184 4.8E-19 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS16775 52b61bd30c6bac1056ae10f4a6d5504a 378 PANTHER PTHR11695 19 54 1.5E-50 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RR42_RS16775 52b61bd30c6bac1056ae10f4a6d5504a 378 PANTHER PTHR11695 86 261 1.5E-50 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RR42_RS16775 52b61bd30c6bac1056ae10f4a6d5504a 378 PANTHER PTHR11695:SF28 19 54 1.5E-50 T 23-04-2016 RR42_RS16775 52b61bd30c6bac1056ae10f4a6d5504a 378 PANTHER PTHR11695:SF28 86 261 1.5E-50 T 23-04-2016 RR42_RS16775 52b61bd30c6bac1056ae10f4a6d5504a 378 Gene3D G3DSA:3.40.50.720 179 260 4.2E-7 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS16775 52b61bd30c6bac1056ae10f4a6d5504a 378 Gene3D G3DSA:3.90.180.10 19 178 1.2E-25 T 23-04-2016 IPR011032 GroES-like RR42_RS16775 52b61bd30c6bac1056ae10f4a6d5504a 378 SUPERFAMILY SSF50129 13 60 1.48E-23 T 23-04-2016 IPR011032 GroES-like RR42_RS16775 52b61bd30c6bac1056ae10f4a6d5504a 378 SUPERFAMILY SSF50129 87 184 1.48E-23 T 23-04-2016 IPR011032 GroES-like RR42_RS16775 52b61bd30c6bac1056ae10f4a6d5504a 378 SMART SM00829 15 370 0.0017 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RR42_RS16775 52b61bd30c6bac1056ae10f4a6d5504a 378 SUPERFAMILY SSF51735 148 258 4.28E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS04005 4d1bc4a2d72234509a978d6674c7fcb4 747 SMART SM01008 227 310 4.0E-12 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RR42_RS04005 4d1bc4a2d72234509a978d6674c7fcb4 747 Gene3D G3DSA:3.30.365.10 578 744 5.3E-30 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS04005 4d1bc4a2d72234509a978d6674c7fcb4 747 Gene3D G3DSA:3.90.1170.50 210 308 6.0E-19 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RR42_RS04005 4d1bc4a2d72234509a978d6674c7fcb4 747 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 617 699 3.1E-8 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS04005 4d1bc4a2d72234509a978d6674c7fcb4 747 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 63 233 1.0E-11 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS04005 4d1bc4a2d72234509a978d6674c7fcb4 747 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 339 576 1.9E-20 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS04005 4d1bc4a2d72234509a978d6674c7fcb4 747 Gene3D G3DSA:3.30.365.10 65 209 3.2E-30 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS04005 4d1bc4a2d72234509a978d6674c7fcb4 747 Gene3D G3DSA:3.30.365.10 408 577 4.1E-27 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS04005 4d1bc4a2d72234509a978d6674c7fcb4 747 SUPERFAMILY SSF56003 340 744 2.49E-104 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS04005 4d1bc4a2d72234509a978d6674c7fcb4 747 SUPERFAMILY SSF56003 38 260 1.95E-37 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS04005 4d1bc4a2d72234509a978d6674c7fcb4 747 PANTHER PTHR11908:SF79 148 740 6.4E-169 T 23-04-2016 RR42_RS04005 4d1bc4a2d72234509a978d6674c7fcb4 747 PIRSF PIRSF036389 16 747 3.2E-216 T 23-04-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related RR42_RS04005 4d1bc4a2d72234509a978d6674c7fcb4 747 PANTHER PTHR11908 148 740 6.4E-169 T 23-04-2016 RR42_RS15305 987192aa348f80d70bd278ad52d8028d 284 Pfam PF00899 ThiF family 29 278 3.0E-34 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RR42_RS15305 987192aa348f80d70bd278ad52d8028d 284 PANTHER PTHR10953 239 270 3.0E-88 T 23-04-2016 RR42_RS15305 987192aa348f80d70bd278ad52d8028d 284 PANTHER PTHR10953:SF159 20 173 3.0E-88 T 23-04-2016 RR42_RS15305 987192aa348f80d70bd278ad52d8028d 284 PANTHER PTHR10953:SF159 239 270 3.0E-88 T 23-04-2016 RR42_RS15305 987192aa348f80d70bd278ad52d8028d 284 PANTHER PTHR10953:SF159 206 223 3.0E-88 T 23-04-2016 RR42_RS15305 987192aa348f80d70bd278ad52d8028d 284 SUPERFAMILY SSF69572 15 276 9.94E-59 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RR42_RS15305 987192aa348f80d70bd278ad52d8028d 284 Gene3D G3DSA:3.40.50.720 11 276 7.6E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS15305 987192aa348f80d70bd278ad52d8028d 284 PANTHER PTHR10953 20 173 3.0E-88 T 23-04-2016 RR42_RS15305 987192aa348f80d70bd278ad52d8028d 284 PANTHER PTHR10953 206 223 3.0E-88 T 23-04-2016 RR42_RS00510 d5c9463f162420bf52c2655899848855 219 Gene3D G3DSA:1.10.10.10 121 214 1.3E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS00510 d5c9463f162420bf52c2655899848855 219 SUPERFAMILY SSF52172 3 121 2.99E-25 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS00510 d5c9463f162420bf52c2655899848855 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 138 212 3.0E-9 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS00510 d5c9463f162420bf52c2655899848855 219 Pfam PF00072 Response regulator receiver domain 6 106 9.2E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS00510 d5c9463f162420bf52c2655899848855 219 PANTHER PTHR26402:SF292 2 218 9.4E-37 T 23-04-2016 RR42_RS00510 d5c9463f162420bf52c2655899848855 219 Gene3D G3DSA:3.40.50.2300 4 119 3.1E-25 T 23-04-2016 RR42_RS00510 d5c9463f162420bf52c2655899848855 219 PANTHER PTHR26402 2 218 9.4E-37 T 23-04-2016 RR42_RS00510 d5c9463f162420bf52c2655899848855 219 SMART SM00448 2 111 1.4E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS00510 d5c9463f162420bf52c2655899848855 219 SUPERFAMILY SSF46894 118 214 3.12E-12 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS00510 d5c9463f162420bf52c2655899848855 219 SMART SM00862 136 212 1.5E-7 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS17980 30bba1bb2448746e76b4b4a442dfd71f 584 SUPERFAMILY SSF160246 2 134 3.4E-23 T 23-04-2016 RR42_RS17980 30bba1bb2448746e76b4b4a442dfd71f 584 PANTHER PTHR30258 2 258 9.1E-203 T 23-04-2016 RR42_RS17980 30bba1bb2448746e76b4b4a442dfd71f 584 PANTHER PTHR30258 280 584 9.1E-203 T 23-04-2016 RR42_RS17980 30bba1bb2448746e76b4b4a442dfd71f 584 Pfam PF00437 Type II/IV secretion system protein 189 474 1.2E-82 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RR42_RS17980 30bba1bb2448746e76b4b4a442dfd71f 584 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 402 416 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RR42_RS17980 30bba1bb2448746e76b4b4a442dfd71f 584 SUPERFAMILY SSF52540 173 580 6.32E-94 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17980 30bba1bb2448746e76b4b4a442dfd71f 584 Gene3D G3DSA:3.40.50.300 313 582 3.5E-97 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17980 30bba1bb2448746e76b4b4a442dfd71f 584 PANTHER PTHR30258:SF1 2 258 9.1E-203 T 23-04-2016 RR42_RS17980 30bba1bb2448746e76b4b4a442dfd71f 584 PANTHER PTHR30258:SF1 280 584 9.1E-203 T 23-04-2016 RR42_RS17980 30bba1bb2448746e76b4b4a442dfd71f 584 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 37 139 1.0E-9 T 23-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 RR42_RS17980 30bba1bb2448746e76b4b4a442dfd71f 584 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 3 583 2.4E-227 T 23-04-2016 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 RR42_RS17980 30bba1bb2448746e76b4b4a442dfd71f 584 Gene3D G3DSA:3.30.450.90 169 307 1.6E-47 T 23-04-2016 RR42_RS12315 9c928867d7f35b11e4d5d668a5d90ff5 297 PANTHER PTHR30537:SF5 1 295 8.7E-99 T 23-04-2016 RR42_RS12315 9c928867d7f35b11e4d5d668a5d90ff5 297 Gene3D G3DSA:3.40.190.10 88 164 1.8E-4 T 23-04-2016 RR42_RS12315 9c928867d7f35b11e4d5d668a5d90ff5 297 SUPERFAMILY SSF46785 5 111 1.02E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS12315 9c928867d7f35b11e4d5d668a5d90ff5 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 2.1E-21 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS12315 9c928867d7f35b11e4d5d668a5d90ff5 297 PANTHER PTHR30537 1 295 8.7E-99 T 23-04-2016 RR42_RS12315 9c928867d7f35b11e4d5d668a5d90ff5 297 Gene3D G3DSA:3.40.190.10 165 260 8.8E-20 T 23-04-2016 RR42_RS12315 9c928867d7f35b11e4d5d668a5d90ff5 297 Pfam PF03466 LysR substrate binding domain 89 292 9.3E-43 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS12315 9c928867d7f35b11e4d5d668a5d90ff5 297 Gene3D G3DSA:1.10.10.10 4 85 2.6E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS12315 9c928867d7f35b11e4d5d668a5d90ff5 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.7E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS12315 9c928867d7f35b11e4d5d668a5d90ff5 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.7E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS12315 9c928867d7f35b11e4d5d668a5d90ff5 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.7E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS12315 9c928867d7f35b11e4d5d668a5d90ff5 297 SUPERFAMILY SSF53850 90 295 5.79E-44 T 23-04-2016 RR42_RS16010 3c7c16194adeade3392c2eb054dc755b 362 ProSitePatterns PS01215 Mrp family signature. 203 219 - T 23-04-2016 IPR000808 Mrp, conserved site GO:0005524 RR42_RS16010 3c7c16194adeade3392c2eb054dc755b 362 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 97 339 1.9E-103 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein RR42_RS16010 3c7c16194adeade3392c2eb054dc755b 362 Pfam PF01883 Domain of unknown function DUF59 6 76 1.0E-23 T 23-04-2016 IPR002744 Domain of unknown function DUF59 RR42_RS16010 3c7c16194adeade3392c2eb054dc755b 362 Gene3D G3DSA:3.40.50.300 94 339 1.1E-107 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS16010 3c7c16194adeade3392c2eb054dc755b 362 PANTHER PTHR23264 1 355 2.8E-164 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein RR42_RS16010 3c7c16194adeade3392c2eb054dc755b 362 PANTHER PTHR23264:SF19 1 355 2.8E-164 T 23-04-2016 RR42_RS16010 3c7c16194adeade3392c2eb054dc755b 362 Hamap MF_02040 Iron-sulfur cluster carrier protein. 92 340 37.842 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein RR42_RS16010 3c7c16194adeade3392c2eb054dc755b 362 SUPERFAMILY SSF117916 3 85 2.58E-19 T 23-04-2016 RR42_RS16010 3c7c16194adeade3392c2eb054dc755b 362 SUPERFAMILY SSF52540 90 324 1.49E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03495 ee4147287131b6b3e0019edcccf4125e 626 PIRSF PIRSF028304 1 626 6.9E-164 T 23-04-2016 IPR010272 Type VI secretion system, TssF-like RR42_RS03495 ee4147287131b6b3e0019edcccf4125e 626 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 6 623 3.5E-207 T 23-04-2016 IPR010272 Type VI secretion system, TssF-like RR42_RS03495 ee4147287131b6b3e0019edcccf4125e 626 PANTHER PTHR35370:SF2 2 626 0.0 T 23-04-2016 RR42_RS03495 ee4147287131b6b3e0019edcccf4125e 626 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 624 4.0E-190 T 23-04-2016 IPR010272 Type VI secretion system, TssF-like RR42_RS03495 ee4147287131b6b3e0019edcccf4125e 626 PANTHER PTHR35370 2 626 0.0 T 23-04-2016 RR42_RS02300 08e703b21ea693c4f28c5c1fe9188b59 240 SUPERFAMILY SSF46689 25 95 3.18E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS02300 08e703b21ea693c4f28c5c1fe9188b59 240 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 44 2.9E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS02300 08e703b21ea693c4f28c5c1fe9188b59 240 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 52 75 2.9E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS02300 08e703b21ea693c4f28c5c1fe9188b59 240 SUPERFAMILY SSF48498 98 219 5.72E-11 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RR42_RS02300 08e703b21ea693c4f28c5c1fe9188b59 240 Gene3D G3DSA:1.10.357.10 11 219 2.2E-37 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS02300 08e703b21ea693c4f28c5c1fe9188b59 240 PANTHER PTHR30328 3 181 5.0E-23 T 23-04-2016 RR42_RS02300 08e703b21ea693c4f28c5c1fe9188b59 240 Pfam PF00440 Bacterial regulatory proteins, tetR family 31 77 1.4E-14 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS10390 9e0cb52c80f9d98f1de3c0ed47996cc7 402 PANTHER PTHR22946 137 349 1.8E-15 T 23-04-2016 RR42_RS10390 9e0cb52c80f9d98f1de3c0ed47996cc7 402 Gene3D G3DSA:1.20.1440.110 57 123 1.3E-7 T 23-04-2016 RR42_RS10390 9e0cb52c80f9d98f1de3c0ed47996cc7 402 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 64 264 4.0E-12 T 23-04-2016 IPR010520 UPF0255 family RR42_RS10390 9e0cb52c80f9d98f1de3c0ed47996cc7 402 PANTHER PTHR22946:SF0 137 349 1.8E-15 T 23-04-2016 RR42_RS10390 9e0cb52c80f9d98f1de3c0ed47996cc7 402 SUPERFAMILY SSF53474 35 366 8.96E-57 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS10390 9e0cb52c80f9d98f1de3c0ed47996cc7 402 Gene3D G3DSA:3.40.50.1820 124 353 5.1E-39 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS11770 b4db48bd909ea9b66b1934314f3fea0f 145 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 11 134 6.9E-31 T 23-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain RR42_RS11770 b4db48bd909ea9b66b1934314f3fea0f 145 Gene3D G3DSA:3.30.530.20 1 143 1.3E-44 T 23-04-2016 IPR023393 START-like domain RR42_RS11770 b4db48bd909ea9b66b1934314f3fea0f 145 PANTHER PTHR12901 1 144 2.0E-47 T 23-04-2016 RR42_RS11770 b4db48bd909ea9b66b1934314f3fea0f 145 PANTHER PTHR12901:SF7 1 144 2.0E-47 T 23-04-2016 RR42_RS11770 b4db48bd909ea9b66b1934314f3fea0f 145 SUPERFAMILY SSF55961 1 143 6.98E-34 T 23-04-2016 RR42_RS05170 87eaa1f9215a2dcf4f3001317a102c45 366 SUPERFAMILY SSF56935 26 366 3.97E-51 T 23-04-2016 RR42_RS05170 87eaa1f9215a2dcf4f3001317a102c45 366 Gene3D G3DSA:2.40.160.10 27 366 1.1E-61 T 23-04-2016 IPR023614 Porin domain RR42_RS05170 87eaa1f9215a2dcf4f3001317a102c45 366 PRINTS PR00184 Neisseria sp. porin signature 94 113 1.8E-6 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RR42_RS05170 87eaa1f9215a2dcf4f3001317a102c45 366 PRINTS PR00184 Neisseria sp. porin signature 307 331 1.8E-6 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RR42_RS05170 87eaa1f9215a2dcf4f3001317a102c45 366 PRINTS PR00184 Neisseria sp. porin signature 57 82 1.8E-6 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RR42_RS05170 87eaa1f9215a2dcf4f3001317a102c45 366 Pfam PF13609 Gram-negative porin 9 329 3.7E-38 T 23-04-2016 RR42_RS18895 6c4f203d01bf6d86b18b3acaf01a44ef 217 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 215 33.852 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 RR42_RS18895 6c4f203d01bf6d86b18b3acaf01a44ef 217 SUPERFAMILY SSF52317 2 215 5.43E-54 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RR42_RS18895 6c4f203d01bf6d86b18b3acaf01a44ef 217 Gene3D G3DSA:3.40.50.880 1 215 2.3E-78 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RR42_RS18895 6c4f203d01bf6d86b18b3acaf01a44ef 217 PANTHER PTHR21235 4 215 2.1E-77 T 23-04-2016 RR42_RS18895 6c4f203d01bf6d86b18b3acaf01a44ef 217 Pfam PF00117 Glutamine amidotransferase class-I 6 203 3.5E-16 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RR42_RS18895 6c4f203d01bf6d86b18b3acaf01a44ef 217 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 214 1.3E-59 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 RR42_RS18895 6c4f203d01bf6d86b18b3acaf01a44ef 217 PIRSF PIRSF000495 2 217 2.3E-64 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 RR42_RS18895 6c4f203d01bf6d86b18b3acaf01a44ef 217 PANTHER PTHR21235:SF1 4 215 2.1E-77 T 23-04-2016 RR42_RS00250 48339864977b9b62fce7a724a596ffc5 348 SUPERFAMILY SSF46785 27 98 2.8E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS00250 48339864977b9b62fce7a724a596ffc5 348 Pfam PF07729 FCD domain 197 322 1.2E-11 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS00250 48339864977b9b62fce7a724a596ffc5 348 SUPERFAMILY SSF48008 194 329 1.83E-16 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS00250 48339864977b9b62fce7a724a596ffc5 348 Gene3D G3DSA:1.20.120.530 190 331 6.0E-19 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS00250 48339864977b9b62fce7a724a596ffc5 348 SMART SM00345 129 187 0.04 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS00250 48339864977b9b62fce7a724a596ffc5 348 SMART SM00345 36 94 3.8E-7 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS00250 48339864977b9b62fce7a724a596ffc5 348 PANTHER PTHR11751 191 213 2.5E-13 T 23-04-2016 RR42_RS00250 48339864977b9b62fce7a724a596ffc5 348 PANTHER PTHR11751 30 96 2.5E-13 T 23-04-2016 RR42_RS00250 48339864977b9b62fce7a724a596ffc5 348 Gene3D G3DSA:1.10.10.10 21 93 2.2E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS00250 48339864977b9b62fce7a724a596ffc5 348 Gene3D G3DSA:1.10.10.10 117 187 8.9E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS00250 48339864977b9b62fce7a724a596ffc5 348 SUPERFAMILY SSF46785 126 191 3.85E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS00250 48339864977b9b62fce7a724a596ffc5 348 SMART SM00895 197 323 4.4E-9 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS00250 48339864977b9b62fce7a724a596ffc5 348 Pfam PF00392 Bacterial regulatory proteins, gntR family 129 180 2.0E-5 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS00250 48339864977b9b62fce7a724a596ffc5 348 Pfam PF00392 Bacterial regulatory proteins, gntR family 33 92 1.6E-13 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS25755 4814b81091e88c0e8c6d525ad9944dcf 285 SMART SM00382 26 223 2.1E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS25755 4814b81091e88c0e8c6d525ad9944dcf 285 Gene3D G3DSA:3.40.50.300 1 266 5.2E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS25755 4814b81091e88c0e8c6d525ad9944dcf 285 SUPERFAMILY SSF52540 2 92 5.18E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS25755 4814b81091e88c0e8c6d525ad9944dcf 285 SUPERFAMILY SSF52540 119 249 5.18E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS25755 4814b81091e88c0e8c6d525ad9944dcf 285 Pfam PF12848 ABC transporter 217 285 2.0E-23 T 23-04-2016 IPR032781 ABC-transporter extension domain RR42_RS25755 4814b81091e88c0e8c6d525ad9944dcf 285 PANTHER PTHR19211:SF49 1 285 1.3E-143 T 23-04-2016 RR42_RS25755 4814b81091e88c0e8c6d525ad9944dcf 285 Pfam PF00005 ABC transporter 17 178 6.3E-22 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS25755 4814b81091e88c0e8c6d525ad9944dcf 285 PANTHER PTHR19211 1 285 1.3E-143 T 23-04-2016 RR42_RS25755 4814b81091e88c0e8c6d525ad9944dcf 285 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS07625 b187ee2844679e7ae87fc21e3e5dd6f4 326 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 9 314 49.633 T 23-04-2016 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 RR42_RS07625 b187ee2844679e7ae87fc21e3e5dd6f4 326 Gene3D G3DSA:3.20.20.70 3 238 8.8E-60 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS07625 b187ee2844679e7ae87fc21e3e5dd6f4 326 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 93 111 - T 23-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 RR42_RS07625 b187ee2844679e7ae87fc21e3e5dd6f4 326 Pfam PF01207 Dihydrouridine synthase (Dus) 6 277 7.9E-64 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RR42_RS07625 b187ee2844679e7ae87fc21e3e5dd6f4 326 SUPERFAMILY SSF51395 3 315 2.93E-62 T 23-04-2016 RR42_RS07625 b187ee2844679e7ae87fc21e3e5dd6f4 326 PIRSF PIRSF006621 1 325 1.7E-81 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RR42_RS07625 b187ee2844679e7ae87fc21e3e5dd6f4 326 PANTHER PTHR11082 1 314 2.7E-111 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RR42_RS07625 b187ee2844679e7ae87fc21e3e5dd6f4 326 PANTHER PTHR11082:SF26 1 314 2.7E-111 T 23-04-2016 RR42_RS10625 129fe7901f17e8ac1d4a1eb57e3496ad 452 SUPERFAMILY SSF54826 15 144 1.2E-33 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RR42_RS10625 129fe7901f17e8ac1d4a1eb57e3496ad 452 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 48 144 2.3E-5 T 23-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RR42_RS10625 129fe7901f17e8ac1d4a1eb57e3496ad 452 SUPERFAMILY SSF51604 146 422 3.7E-80 T 23-04-2016 IPR029065 Enolase C-terminal domain-like RR42_RS10625 129fe7901f17e8ac1d4a1eb57e3496ad 452 Gene3D G3DSA:3.30.390.10 42 129 1.8E-10 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RR42_RS10625 129fe7901f17e8ac1d4a1eb57e3496ad 452 PANTHER PTHR13794 180 437 1.4E-278 T 23-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 RR42_RS10625 129fe7901f17e8ac1d4a1eb57e3496ad 452 PANTHER PTHR13794 14 159 1.4E-278 T 23-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 RR42_RS10625 129fe7901f17e8ac1d4a1eb57e3496ad 452 SMART SM00922 192 292 1.6E-13 T 23-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RR42_RS10625 129fe7901f17e8ac1d4a1eb57e3496ad 452 PANTHER PTHR13794:SF47 180 437 1.4E-278 T 23-04-2016 RR42_RS10625 129fe7901f17e8ac1d4a1eb57e3496ad 452 PANTHER PTHR13794:SF47 14 159 1.4E-278 T 23-04-2016 RR42_RS10625 129fe7901f17e8ac1d4a1eb57e3496ad 452 Gene3D G3DSA:3.20.20.120 130 404 1.8E-101 T 23-04-2016 IPR029065 Enolase C-terminal domain-like RR42_RS10625 129fe7901f17e8ac1d4a1eb57e3496ad 452 TIGRFAM TIGR03247 glucar-dehydr: glucarate dehydratase 14 452 1.3E-258 T 23-04-2016 IPR017653 Glucarate dehydratase GO:0000287|GO:0008872|GO:0019394 KEGG: 00053+4.2.1.40|MetaCyc: PWY-6499|UniPathway: UPA00564 RR42_RS10625 129fe7901f17e8ac1d4a1eb57e3496ad 452 Pfam PF13378 Enolase C-terminal domain-like 196 411 1.5E-35 T 23-04-2016 IPR029065 Enolase C-terminal domain-like RR42_RS15445 8536d039fb96559052dd141df7ecf33f 227 PIRSF PIRSF006293 1 227 3.7E-77 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 RR42_RS15445 8536d039fb96559052dd141df7ecf33f 227 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 5 208 8.4E-59 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 RR42_RS15445 8536d039fb96559052dd141df7ecf33f 227 SUPERFAMILY SSF52402 2 223 5.51E-66 T 23-04-2016 RR42_RS15445 8536d039fb96559052dd141df7ecf33f 227 Pfam PF06508 Queuosine biosynthesis protein QueC 4 215 1.2E-76 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 RR42_RS15445 8536d039fb96559052dd141df7ecf33f 227 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 3 221 55.063 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 RR42_RS15445 8536d039fb96559052dd141df7ecf33f 227 Gene3D G3DSA:3.40.50.620 2 224 1.0E-76 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS15445 8536d039fb96559052dd141df7ecf33f 227 PANTHER PTHR11587 2 223 2.0E-104 T 23-04-2016 RR42_RS15445 8536d039fb96559052dd141df7ecf33f 227 PANTHER PTHR11587:SF3 2 223 2.0E-104 T 23-04-2016 RR42_RS15645 8e59c066a5d7e8b084645ecae6003ab5 263 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 74 4.3E-18 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS15645 8e59c066a5d7e8b084645ecae6003ab5 263 SUPERFAMILY SSF48498 97 217 1.51E-20 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RR42_RS15645 8e59c066a5d7e8b084645ecae6003ab5 263 Pfam PF16859 Bacterial transcriptional repressor C-terminal 97 189 3.1E-10 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RR42_RS15645 8e59c066a5d7e8b084645ecae6003ab5 263 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 51 74 4.2E-12 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS15645 8e59c066a5d7e8b084645ecae6003ab5 263 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 43 4.2E-12 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS15645 8e59c066a5d7e8b084645ecae6003ab5 263 Gene3D G3DSA:1.10.357.10 17 231 2.1E-44 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS15645 8e59c066a5d7e8b084645ecae6003ab5 263 SUPERFAMILY SSF46689 17 93 1.33E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS15645 8e59c066a5d7e8b084645ecae6003ab5 263 PANTHER PTHR30055 13 255 1.3E-28 T 23-04-2016 RR42_RS14150 6194f4f3028b103a0bd50a175f98e60c 219 PANTHER PTHR18901 1 215 2.4E-43 T 23-04-2016 RR42_RS14150 6194f4f3028b103a0bd50a175f98e60c 219 PANTHER PTHR18901:SF40 1 215 2.4E-43 T 23-04-2016 RR42_RS14150 6194f4f3028b103a0bd50a175f98e60c 219 Gene3D G3DSA:1.10.150.240 20 75 6.7E-8 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RR42_RS14150 6194f4f3028b103a0bd50a175f98e60c 219 Gene3D G3DSA:3.40.50.1000 76 216 3.3E-41 T 23-04-2016 IPR023214 HAD-like domain RR42_RS14150 6194f4f3028b103a0bd50a175f98e60c 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 186 1.7E-32 T 23-04-2016 IPR023214 HAD-like domain RR42_RS14150 6194f4f3028b103a0bd50a175f98e60c 219 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 93 180 4.1E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS14150 6194f4f3028b103a0bd50a175f98e60c 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 77 186 6.3E-10 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS14150 6194f4f3028b103a0bd50a175f98e60c 219 SUPERFAMILY SSF56784 7 215 2.03E-57 T 23-04-2016 IPR023214 HAD-like domain RR42_RS18020 3adb28dfd083ddff4c442c7ec0836a11 409 PANTHER PTHR23100 18 409 5.2E-177 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RR42_RS18020 3adb28dfd083ddff4c442c7ec0836a11 409 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 409 165.52 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RR42_RS18020 3adb28dfd083ddff4c442c7ec0836a11 409 PANTHER PTHR23100:SF0 18 409 5.2E-177 T 23-04-2016 RR42_RS18020 3adb28dfd083ddff4c442c7ec0836a11 409 SUPERFAMILY SSF56266 16 406 7.59E-142 T 23-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RR42_RS18020 3adb28dfd083ddff4c442c7ec0836a11 409 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 15 409 1.7E-129 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RR42_RS18020 3adb28dfd083ddff4c442c7ec0836a11 409 Pfam PF01960 ArgJ family 23 409 3.5E-148 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RR42_RS18020 3adb28dfd083ddff4c442c7ec0836a11 409 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 24 407 0.0 T 23-04-2016 RR42_RS18020 3adb28dfd083ddff4c442c7ec0836a11 409 Gene3D G3DSA:3.60.70.12 11 280 4.1E-101 T 23-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RR42_RS02385 f4de02839b643d3e705526443fdb61ba 144 Pfam PF01230 HIT domain 22 101 3.1E-12 T 23-04-2016 IPR001310 Histidine triad (HIT) protein RR42_RS02385 f4de02839b643d3e705526443fdb61ba 144 PIRSF PIRSF000714 4 143 9.2E-39 T 23-04-2016 IPR026026 Histidine triad hydrolase, Hint-type RR42_RS02385 f4de02839b643d3e705526443fdb61ba 144 PANTHER PTHR23089:SF13 22 119 1.5E-18 T 23-04-2016 RR42_RS02385 f4de02839b643d3e705526443fdb61ba 144 Gene3D G3DSA:3.30.428.10 5 138 9.2E-41 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 RR42_RS02385 f4de02839b643d3e705526443fdb61ba 144 SUPERFAMILY SSF54197 4 138 1.7E-38 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 RR42_RS02385 f4de02839b643d3e705526443fdb61ba 144 PANTHER PTHR23089 22 119 1.5E-18 T 23-04-2016 IPR001310 Histidine triad (HIT) protein RR42_RS19955 40485dcbed41f22b35de4a7102a43fb8 1098 Gene3D G3DSA:1.10.630.10 29 487 7.1E-120 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 RR42_RS19955 40485dcbed41f22b35de4a7102a43fb8 1098 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 913 922 8.0E-25 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS19955 40485dcbed41f22b35de4a7102a43fb8 1098 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 878 885 8.0E-25 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS19955 40485dcbed41f22b35de4a7102a43fb8 1098 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1023 1039 8.0E-25 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS19955 40485dcbed41f22b35de4a7102a43fb8 1098 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 979 988 8.0E-25 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS19955 40485dcbed41f22b35de4a7102a43fb8 1098 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1046 1054 8.0E-25 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS19955 40485dcbed41f22b35de4a7102a43fb8 1098 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 992 1003 8.0E-25 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS19955 40485dcbed41f22b35de4a7102a43fb8 1098 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 740 750 8.0E-25 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS19955 40485dcbed41f22b35de4a7102a43fb8 1098 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 950 969 8.0E-25 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS19955 40485dcbed41f22b35de4a7102a43fb8 1098 PANTHER PTHR19384:SF17 425 1098 1.3E-174 T 23-04-2016 RR42_RS19955 40485dcbed41f22b35de4a7102a43fb8 1098 Pfam PF00667 FAD binding domain 736 918 6.9E-37 T 23-04-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 RR42_RS19955 40485dcbed41f22b35de4a7102a43fb8 1098 SUPERFAMILY SSF48264 29 485 3.54E-111 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 RR42_RS19955 40485dcbed41f22b35de4a7102a43fb8 1098 Pfam PF00175 Oxidoreductase NAD-binding domain 951 1061 1.9E-13 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RR42_RS19955 40485dcbed41f22b35de4a7102a43fb8 1098 Gene3D G3DSA:1.20.990.10 740 874 3.1E-26 T 23-04-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 RR42_RS19955 40485dcbed41f22b35de4a7102a43fb8 1098 Gene3D G3DSA:2.40.30.10 875 949 4.0E-22 T 23-04-2016 RR42_RS19955 40485dcbed41f22b35de4a7102a43fb8 1098 Gene3D G3DSA:2.40.30.10 725 739 4.0E-22 T 23-04-2016 RR42_RS19955 40485dcbed41f22b35de4a7102a43fb8 1098 Gene3D G3DSA:3.40.50.360 511 660 6.8E-31 T 23-04-2016 IPR029039 Flavoprotein-like domain RR42_RS19955 40485dcbed41f22b35de4a7102a43fb8 1098 Pfam PF00258 Flavodoxin 518 651 1.4E-18 T 23-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 RR42_RS19955 40485dcbed41f22b35de4a7102a43fb8 1098 SUPERFAMILY SSF52218 514 659 8.8E-33 T 23-04-2016 IPR029039 Flavoprotein-like domain RR42_RS19955 40485dcbed41f22b35de4a7102a43fb8 1098 PIRSF PIRSF000209 25 1098 0.0 T 23-04-2016 IPR023206 Bifunctional cytochrome P450/NADPH--cytochrome P450 reductase GO:0003958|GO:0055114|GO:0070330 RR42_RS19955 40485dcbed41f22b35de4a7102a43fb8 1098 Pfam PF00067 Cytochrome P450 33 475 7.6E-90 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 RR42_RS19955 40485dcbed41f22b35de4a7102a43fb8 1098 SUPERFAMILY SSF52343 939 1097 3.4E-42 T 23-04-2016 RR42_RS19955 40485dcbed41f22b35de4a7102a43fb8 1098 PANTHER PTHR19384 425 1098 1.3E-174 T 23-04-2016 RR42_RS19955 40485dcbed41f22b35de4a7102a43fb8 1098 Gene3D G3DSA:3.40.50.80 950 1097 3.7E-50 T 23-04-2016 RR42_RS19955 40485dcbed41f22b35de4a7102a43fb8 1098 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 427 436 - T 23-04-2016 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Reactome: REACT_13433 RR42_RS19955 40485dcbed41f22b35de4a7102a43fb8 1098 SUPERFAMILY SSF63380 726 935 1.55E-54 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RR42_RS19500 1fa5b9ead699e09f6d224cf4992d84c4 339 SUPERFAMILY SSF54523 289 315 1.02E-5 T 23-04-2016 RR42_RS19500 1fa5b9ead699e09f6d224cf4992d84c4 339 SUPERFAMILY SSF54523 49 124 1.02E-5 T 23-04-2016 RR42_RS19500 1fa5b9ead699e09f6d224cf4992d84c4 339 Gene3D G3DSA:3.30.1300.30 290 300 9.7E-5 T 23-04-2016 RR42_RS19500 1fa5b9ead699e09f6d224cf4992d84c4 339 Gene3D G3DSA:3.30.1300.30 37 108 9.7E-5 T 23-04-2016 RR42_RS19500 1fa5b9ead699e09f6d224cf4992d84c4 339 SUPERFAMILY SSF158544 125 223 1.83E-10 T 23-04-2016 RR42_RS19500 1fa5b9ead699e09f6d224cf4992d84c4 339 Pfam PF03934 Type II secretion system (T2SS), protein K 40 316 3.1E-66 T 23-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 RR42_RS19500 1fa5b9ead699e09f6d224cf4992d84c4 339 PIRSF PIRSF002786 10 333 2.9E-70 T 23-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 RR42_RS11275 ad804414ddd76a6e0b3ae05ee6b27491 396 Gene3D G3DSA:3.10.310.10 197 375 1.7E-80 T 23-04-2016 RR42_RS11275 ad804414ddd76a6e0b3ae05ee6b27491 396 PANTHER PTHR30349 1 381 4.1E-135 T 23-04-2016 RR42_RS11275 ad804414ddd76a6e0b3ae05ee6b27491 396 PANTHER PTHR30349:SF21 1 381 4.1E-135 T 23-04-2016 RR42_RS11275 ad804414ddd76a6e0b3ae05ee6b27491 396 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 4 396 3.9E-232 T 23-04-2016 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 UniPathway: UPA00946 RR42_RS11275 ad804414ddd76a6e0b3ae05ee6b27491 396 SUPERFAMILY SSF54506 190 394 3.14E-77 T 23-04-2016 RR42_RS11275 ad804414ddd76a6e0b3ae05ee6b27491 396 Pfam PF04303 PrpF protein 6 392 3.4E-178 T 23-04-2016 IPR007400 PrpF protein RR42_RS11275 ad804414ddd76a6e0b3ae05ee6b27491 396 Gene3D G3DSA:3.10.310.10 2 196 9.3E-91 T 23-04-2016 RR42_RS11275 ad804414ddd76a6e0b3ae05ee6b27491 396 SUPERFAMILY SSF54506 2 182 1.26E-70 T 23-04-2016 RR42_RS07930 7c66436a11e3b78affce1b0abd1aa072 327 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS07930 7c66436a11e3b78affce1b0abd1aa072 327 PANTHER PTHR24220 3 316 1.0E-129 T 23-04-2016 RR42_RS07930 7c66436a11e3b78affce1b0abd1aa072 327 SMART SM00382 30 237 3.2E-18 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS07930 7c66436a11e3b78affce1b0abd1aa072 327 Gene3D G3DSA:3.40.50.300 1 254 6.2E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07930 7c66436a11e3b78affce1b0abd1aa072 327 SUPERFAMILY SSF52540 1 250 5.2E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07930 7c66436a11e3b78affce1b0abd1aa072 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 229 314 4.7E-23 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RR42_RS07930 7c66436a11e3b78affce1b0abd1aa072 327 PANTHER PTHR24220:SF586 3 316 1.0E-129 T 23-04-2016 RR42_RS07930 7c66436a11e3b78affce1b0abd1aa072 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 231 295 1.4E-16 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RR42_RS07930 7c66436a11e3b78affce1b0abd1aa072 327 Pfam PF00005 ABC transporter 22 179 1.9E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS08915 077756612bdee0f5a991d2cdbf6df9df 1267 Gene3D G3DSA:2.20.25.90 53 98 1.2E-30 T 23-04-2016 RR42_RS08915 077756612bdee0f5a991d2cdbf6df9df 1267 Gene3D G3DSA:3.40.228.10 218 336 1.0E-77 T 23-04-2016 RR42_RS08915 077756612bdee0f5a991d2cdbf6df9df 1267 Gene3D G3DSA:3.40.228.10 507 613 1.0E-77 T 23-04-2016 RR42_RS08915 077756612bdee0f5a991d2cdbf6df9df 1267 SUPERFAMILY SSF50692 1102 1256 4.07E-47 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain RR42_RS08915 077756612bdee0f5a991d2cdbf6df9df 1267 Gene3D G3DSA:3.40.50.740 614 799 2.1E-69 T 23-04-2016 RR42_RS08915 077756612bdee0f5a991d2cdbf6df9df 1267 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1256 0.0 T 23-04-2016 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 RR42_RS08915 077756612bdee0f5a991d2cdbf6df9df 1267 Gene3D G3DSA:3.40.50.740 108 204 3.6E-6 T 23-04-2016 RR42_RS08915 077756612bdee0f5a991d2cdbf6df9df 1267 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1146 1173 - T 23-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RR42_RS08915 077756612bdee0f5a991d2cdbf6df9df 1267 SUPERFAMILY SSF53706 3 1091 0.0 T 23-04-2016 RR42_RS08915 077756612bdee0f5a991d2cdbf6df9df 1267 PANTHER PTHR11615:SF165 872 897 0.0 T 23-04-2016 RR42_RS08915 077756612bdee0f5a991d2cdbf6df9df 1267 PANTHER PTHR11615:SF165 718 856 0.0 T 23-04-2016 RR42_RS08915 077756612bdee0f5a991d2cdbf6df9df 1267 PANTHER PTHR11615:SF165 1016 1250 0.0 T 23-04-2016 RR42_RS08915 077756612bdee0f5a991d2cdbf6df9df 1267 PANTHER PTHR11615:SF165 34 417 0.0 T 23-04-2016 RR42_RS08915 077756612bdee0f5a991d2cdbf6df9df 1267 Gene3D G3DSA:4.10.1200.10 1 25 3.5E-14 T 23-04-2016 RR42_RS08915 077756612bdee0f5a991d2cdbf6df9df 1267 Pfam PF00384 Molybdopterin oxidoreductase 108 852 3.1E-161 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RR42_RS08915 077756612bdee0f5a991d2cdbf6df9df 1267 Gene3D G3DSA:3.90.55.10 800 851 1.7E-7 T 23-04-2016 RR42_RS08915 077756612bdee0f5a991d2cdbf6df9df 1267 Gene3D G3DSA:2.40.40.20 1075 1255 3.0E-42 T 23-04-2016 RR42_RS08915 077756612bdee0f5a991d2cdbf6df9df 1267 Pfam PF01568 Molydopterin dinucleotide binding domain 1108 1223 2.7E-22 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RR42_RS08915 077756612bdee0f5a991d2cdbf6df9df 1267 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 6.4E-19 T 23-04-2016 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 RR42_RS08915 077756612bdee0f5a991d2cdbf6df9df 1267 SMART SM00926 43 105 8.1E-7 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RR42_RS08915 077756612bdee0f5a991d2cdbf6df9df 1267 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 797 814 - T 23-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RR42_RS08915 077756612bdee0f5a991d2cdbf6df9df 1267 PANTHER PTHR11615 872 897 0.0 T 23-04-2016 RR42_RS08915 077756612bdee0f5a991d2cdbf6df9df 1267 PANTHER PTHR11615 718 856 0.0 T 23-04-2016 RR42_RS08915 077756612bdee0f5a991d2cdbf6df9df 1267 PANTHER PTHR11615 1016 1250 0.0 T 23-04-2016 RR42_RS08915 077756612bdee0f5a991d2cdbf6df9df 1267 PANTHER PTHR11615 34 417 0.0 T 23-04-2016 RR42_RS05940 42554840627ba598a01373bb27795aa2 185 Gene3D G3DSA:2.30.22.10 129 184 9.1E-25 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 RR42_RS05940 42554840627ba598a01373bb27795aa2 185 Hamap MF_01151 Protein GrpE [grpE]. 2 183 18.91 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RR42_RS05940 42554840627ba598a01373bb27795aa2 185 SUPERFAMILY SSF58014 37 126 6.8E-23 T 23-04-2016 RR42_RS05940 42554840627ba598a01373bb27795aa2 185 PRINTS PR00773 GrpE protein signature 136 151 2.1E-25 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RR42_RS05940 42554840627ba598a01373bb27795aa2 185 PRINTS PR00773 GrpE protein signature 162 181 2.1E-25 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RR42_RS05940 42554840627ba598a01373bb27795aa2 185 PRINTS PR00773 GrpE protein signature 56 72 2.1E-25 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RR42_RS05940 42554840627ba598a01373bb27795aa2 185 PRINTS PR00773 GrpE protein signature 84 99 2.1E-25 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RR42_RS05940 42554840627ba598a01373bb27795aa2 185 ProSitePatterns PS01071 grpE protein signature. 139 181 - T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RR42_RS05940 42554840627ba598a01373bb27795aa2 185 Gene3D G3DSA:3.90.20.20 36 126 5.4E-27 T 23-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil RR42_RS05940 42554840627ba598a01373bb27795aa2 185 Pfam PF01025 GrpE 30 182 1.5E-46 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RR42_RS05940 42554840627ba598a01373bb27795aa2 185 PANTHER PTHR21237 38 185 3.3E-52 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RR42_RS05940 42554840627ba598a01373bb27795aa2 185 SUPERFAMILY SSF51064 130 183 1.57E-17 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 RR42_RS03940 83ac0a9fc72010df2ee6337ec85db6e6 389 Pfam PF04982 HPP family 66 185 4.1E-40 T 23-04-2016 IPR007065 HPP RR42_RS03940 83ac0a9fc72010df2ee6337ec85db6e6 389 Gene3D G3DSA:3.10.580.10 250 374 1.0E-28 T 23-04-2016 RR42_RS03940 83ac0a9fc72010df2ee6337ec85db6e6 389 SMART SM00116 259 307 5.8E-8 T 23-04-2016 IPR000644 CBS domain RR42_RS03940 83ac0a9fc72010df2ee6337ec85db6e6 389 SMART SM00116 325 373 9.2E-10 T 23-04-2016 IPR000644 CBS domain RR42_RS03940 83ac0a9fc72010df2ee6337ec85db6e6 389 Pfam PF00571 CBS domain 318 373 1.2E-11 T 23-04-2016 IPR000644 CBS domain RR42_RS03940 83ac0a9fc72010df2ee6337ec85db6e6 389 Pfam PF00571 CBS domain 254 305 1.6E-9 T 23-04-2016 IPR000644 CBS domain RR42_RS03940 83ac0a9fc72010df2ee6337ec85db6e6 389 PANTHER PTHR33741 39 291 6.3E-33 T 23-04-2016 RR42_RS03940 83ac0a9fc72010df2ee6337ec85db6e6 389 SUPERFAMILY SSF54631 240 374 5.53E-31 T 23-04-2016 RR42_RS05720 6f2cd90d566f17d3ccc157413b31a2d0 311 Gene3D G3DSA:3.40.190.10 90 172 4.8E-26 T 23-04-2016 RR42_RS05720 6f2cd90d566f17d3ccc157413b31a2d0 311 Gene3D G3DSA:3.40.190.10 273 300 4.8E-26 T 23-04-2016 RR42_RS05720 6f2cd90d566f17d3ccc157413b31a2d0 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.2E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS05720 6f2cd90d566f17d3ccc157413b31a2d0 311 Pfam PF03466 LysR substrate binding domain 97 296 4.0E-26 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS05720 6f2cd90d566f17d3ccc157413b31a2d0 311 SUPERFAMILY SSF53850 90 296 1.32E-44 T 23-04-2016 RR42_RS05720 6f2cd90d566f17d3ccc157413b31a2d0 311 Gene3D G3DSA:1.10.10.10 1 86 1.1E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS05720 6f2cd90d566f17d3ccc157413b31a2d0 311 Gene3D G3DSA:3.40.190.10 173 269 2.3E-32 T 23-04-2016 RR42_RS05720 6f2cd90d566f17d3ccc157413b31a2d0 311 PANTHER PTHR30118 1 307 8.7E-112 T 23-04-2016 RR42_RS05720 6f2cd90d566f17d3ccc157413b31a2d0 311 SUPERFAMILY SSF46785 2 85 4.49E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS05720 6f2cd90d566f17d3ccc157413b31a2d0 311 PANTHER PTHR30118:SF4 1 307 8.7E-112 T 23-04-2016 RR42_RS05720 6f2cd90d566f17d3ccc157413b31a2d0 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.2E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS05720 6f2cd90d566f17d3ccc157413b31a2d0 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.2E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS05720 6f2cd90d566f17d3ccc157413b31a2d0 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.2E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS31225 65daec3dbc422489488ac123a673a6f3 149 Gene3D G3DSA:2.30.38.10 53 126 7.8E-19 T 23-04-2016 RR42_RS31225 65daec3dbc422489488ac123a673a6f3 149 PANTHER PTHR24096:SF53 1 149 1.4E-60 T 23-04-2016 RR42_RS31225 65daec3dbc422489488ac123a673a6f3 149 PANTHER PTHR24096 1 149 1.4E-60 T 23-04-2016 RR42_RS31225 65daec3dbc422489488ac123a673a6f3 149 SUPERFAMILY SSF56801 2 149 8.5E-38 T 23-04-2016 RR42_RS31225 65daec3dbc422489488ac123a673a6f3 149 Pfam PF00501 AMP-binding enzyme 2 132 3.4E-27 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS05075 924b5799ba8ed154e272dd119f52f455 337 Gene3D G3DSA:3.20.20.140 6 334 8.7E-83 T 23-04-2016 RR42_RS05075 924b5799ba8ed154e272dd119f52f455 337 Pfam PF04909 Amidohydrolase 7 332 5.4E-43 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RR42_RS05075 924b5799ba8ed154e272dd119f52f455 337 SUPERFAMILY SSF51556 6 335 5.79E-80 T 23-04-2016 IPR032466 Metal-dependent hydrolase RR42_RS05075 924b5799ba8ed154e272dd119f52f455 337 PANTHER PTHR21240:SF3 1 332 2.3E-87 T 23-04-2016 IPR032465 Amino-carboxymuconate-semialdehyde decarboxylase GO:0001760|GO:0006568|GO:1904984 KEGG: 00380+4.1.1.45|MetaCyc: PWY-5647|MetaCyc: PWY-5652|MetaCyc: PWY-5654|UniPathway: UPA00270 RR42_RS05075 924b5799ba8ed154e272dd119f52f455 337 PANTHER PTHR21240 1 332 2.3E-87 T 23-04-2016 RR42_RS13015 d384ca62cb1509a8f8a9f5c640839613 324 Pfam PF04116 Fatty acid hydroxylase superfamily 135 279 2.9E-31 T 23-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 RR42_RS30510 113dcbe837e8fcb569af61a29d1dd26f 214 Pfam PF13609 Gram-negative porin 5 201 1.1E-23 T 23-04-2016 RR42_RS30510 113dcbe837e8fcb569af61a29d1dd26f 214 Gene3D G3DSA:2.40.160.10 1 205 1.9E-34 T 23-04-2016 IPR023614 Porin domain RR42_RS30510 113dcbe837e8fcb569af61a29d1dd26f 214 SUPERFAMILY SSF56935 8 208 1.37E-29 T 23-04-2016 RR42_RS05380 7de0acaf4e0271aadc322f0bf14a7cef 205 Gene3D G3DSA:1.25.40.10 99 205 4.2E-35 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS05380 7de0acaf4e0271aadc322f0bf14a7cef 205 Gene3D G3DSA:1.20.58.320 14 98 3.8E-25 T 23-04-2016 RR42_RS05380 7de0acaf4e0271aadc322f0bf14a7cef 205 PANTHER PTHR23004 39 205 1.9E-63 T 23-04-2016 RR42_RS05380 7de0acaf4e0271aadc322f0bf14a7cef 205 Pfam PF06041 Bacterial protein of unknown function (DUF924) 19 202 1.0E-59 T 23-04-2016 IPR010323 Protein of unknown function DUF924 RR42_RS05380 7de0acaf4e0271aadc322f0bf14a7cef 205 PANTHER PTHR23004:SF7 39 205 1.9E-63 T 23-04-2016 RR42_RS05380 7de0acaf4e0271aadc322f0bf14a7cef 205 SUPERFAMILY SSF48452 14 201 1.44E-59 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS02190 5d18c0c87034266ae73df0136e10df13 204 Gene3D G3DSA:3.20.130.10 2 182 4.4E-53 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RR42_RS02190 5d18c0c87034266ae73df0136e10df13 204 SUPERFAMILY SSF117457 4 181 5.62E-42 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RR42_RS02190 5d18c0c87034266ae73df0136e10df13 204 Pfam PF05683 Fumarase C-terminus 7 183 3.7E-30 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RR42_RS02190 5d18c0c87034266ae73df0136e10df13 204 PANTHER PTHR30389 1 203 2.4E-52 T 23-04-2016 RR42_RS02190 5d18c0c87034266ae73df0136e10df13 204 PANTHER PTHR30389:SF5 1 203 2.4E-52 T 23-04-2016 RR42_RS14265 ed944203ec906fe0238820f21b2f0e3b 442 SMART SM00388 206 275 1.8E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS14265 ed944203ec906fe0238820f21b2f0e3b 442 SMART SM00304 153 205 7.5E-6 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS14265 ed944203ec906fe0238820f21b2f0e3b 442 Pfam PF00672 HAMP domain 138 201 1.4E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS14265 ed944203ec906fe0238820f21b2f0e3b 442 SUPERFAMILY SSF55874 265 432 1.28E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS14265 ed944203ec906fe0238820f21b2f0e3b 442 SUPERFAMILY SSF158472 155 202 4.71E-5 T 23-04-2016 RR42_RS14265 ed944203ec906fe0238820f21b2f0e3b 442 SMART SM00387 321 432 1.1E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS14265 ed944203ec906fe0238820f21b2f0e3b 442 PANTHER PTHR24423:SF564 57 63 2.5E-67 T 23-04-2016 RR42_RS14265 ed944203ec906fe0238820f21b2f0e3b 442 PANTHER PTHR24423:SF564 147 429 2.5E-67 T 23-04-2016 RR42_RS14265 ed944203ec906fe0238820f21b2f0e3b 442 Pfam PF00512 His Kinase A (phospho-acceptor) domain 207 275 2.7E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS14265 ed944203ec906fe0238820f21b2f0e3b 442 SUPERFAMILY SSF47384 189 275 3.92E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS14265 ed944203ec906fe0238820f21b2f0e3b 442 Gene3D G3DSA:3.30.565.10 281 431 2.5E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS14265 ed944203ec906fe0238820f21b2f0e3b 442 PANTHER PTHR24423 57 63 2.5E-67 T 23-04-2016 RR42_RS14265 ed944203ec906fe0238820f21b2f0e3b 442 PANTHER PTHR24423 147 429 2.5E-67 T 23-04-2016 RR42_RS14265 ed944203ec906fe0238820f21b2f0e3b 442 Gene3D G3DSA:1.10.287.130 196 269 2.1E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS14265 ed944203ec906fe0238820f21b2f0e3b 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 6.1E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS14265 ed944203ec906fe0238820f21b2f0e3b 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 410 6.1E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS14265 ed944203ec906fe0238820f21b2f0e3b 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 385 6.1E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS14265 ed944203ec906fe0238820f21b2f0e3b 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 429 6.1E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS14265 ed944203ec906fe0238820f21b2f0e3b 442 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 324 429 4.4E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS05160 6dedd9f37147423ddb628761f56d4be9 157 ProSitePatterns PS00934 Glyoxalase I signature 1. 7 28 - T 23-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 RR42_RS05160 6dedd9f37147423ddb628761f56d4be9 157 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 93 2.7E-11 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RR42_RS05160 6dedd9f37147423ddb628761f56d4be9 157 SUPERFAMILY SSF54593 1 126 2.01E-21 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS05160 6dedd9f37147423ddb628761f56d4be9 157 Gene3D G3DSA:3.10.180.10 7 124 6.1E-18 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS02870 cee91be6a62ba427861deba6bfcdcda5 562 Gene3D G3DSA:3.40.50.300 1 216 3.4E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02870 cee91be6a62ba427861deba6bfcdcda5 562 PANTHER PTHR24031:SF0 433 540 6.2E-198 T 23-04-2016 RR42_RS02870 cee91be6a62ba427861deba6bfcdcda5 562 PANTHER PTHR24031:SF0 1 398 6.2E-198 T 23-04-2016 RR42_RS02870 cee91be6a62ba427861deba6bfcdcda5 562 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 518 51.551 T 23-04-2016 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 RR42_RS02870 cee91be6a62ba427861deba6bfcdcda5 562 Gene3D G3DSA:3.40.50.300 217 375 6.1E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02870 cee91be6a62ba427861deba6bfcdcda5 562 Pfam PF00270 DEAD/DEAH box helicase 25 198 1.1E-50 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RR42_RS02870 cee91be6a62ba427861deba6bfcdcda5 562 SMART SM00487 20 227 7.1E-62 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RR42_RS02870 cee91be6a62ba427861deba6bfcdcda5 562 Pfam PF00271 Helicase conserved C-terminal domain 238 344 6.3E-27 T 23-04-2016 IPR001650 Helicase, C-terminal RR42_RS02870 cee91be6a62ba427861deba6bfcdcda5 562 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 158 166 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RR42_RS02870 cee91be6a62ba427861deba6bfcdcda5 562 SMART SM00490 263 344 7.2E-32 T 23-04-2016 IPR001650 Helicase, C-terminal RR42_RS02870 cee91be6a62ba427861deba6bfcdcda5 562 SUPERFAMILY SSF52540 23 107 3.13E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02870 cee91be6a62ba427861deba6bfcdcda5 562 PANTHER PTHR24031 433 540 6.2E-198 T 23-04-2016 RR42_RS02870 cee91be6a62ba427861deba6bfcdcda5 562 PANTHER PTHR24031 1 398 6.2E-198 T 23-04-2016 RR42_RS02870 cee91be6a62ba427861deba6bfcdcda5 562 SUPERFAMILY SSF52540 80 365 1.14E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13300 9e2bc381c9b98ed118c9007fbaf03e2f 971 Gene3D G3DSA:3.40.50.300 561 604 5.6E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13300 9e2bc381c9b98ed118c9007fbaf03e2f 971 Gene3D G3DSA:3.40.50.300 285 373 5.6E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13300 9e2bc381c9b98ed118c9007fbaf03e2f 971 Pfam PF12705 PD-(D/E)XK nuclease superfamily 697 954 7.0E-28 T 23-04-2016 RR42_RS13300 9e2bc381c9b98ed118c9007fbaf03e2f 971 SUPERFAMILY SSF52540 298 669 2.55E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01120 6863e51d6d721719f5a73fed048dd946 193 SUPERFAMILY SSF88946 10 80 2.12E-15 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS01120 6863e51d6d721719f5a73fed048dd946 193 PANTHER PTHR30173 12 187 2.9E-26 T 23-04-2016 RR42_RS01120 6863e51d6d721719f5a73fed048dd946 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 184 1.7E-22 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS01120 6863e51d6d721719f5a73fed048dd946 193 Gene3D G3DSA:1.10.10.10 121 185 2.8E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS01120 6863e51d6d721719f5a73fed048dd946 193 TIGRFAM TIGR02943 Sig70_famx1: RNA polymerase sigma-70 factor, TIGR02943 family 3 192 1.3E-80 T 23-04-2016 IPR014289 RNA polymerase sigma-24-related RR42_RS01120 6863e51d6d721719f5a73fed048dd946 193 SUPERFAMILY SSF88659 116 185 9.16E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS01120 6863e51d6d721719f5a73fed048dd946 193 Pfam PF04542 Sigma-70 region 2 9 74 6.4E-13 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS01120 6863e51d6d721719f5a73fed048dd946 193 Pfam PF08281 Sigma-70, region 4 128 180 5.1E-9 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS01120 6863e51d6d721719f5a73fed048dd946 193 Gene3D G3DSA:1.10.1740.10 9 75 2.7E-16 T 23-04-2016 RR42_RS01120 6863e51d6d721719f5a73fed048dd946 193 PANTHER PTHR30173:SF24 12 187 2.9E-26 T 23-04-2016 RR42_RS17745 507c51b491255586b39ac4138ecca531 160 PANTHER PTHR36919:SF1 16 158 2.1E-44 T 23-04-2016 RR42_RS17745 507c51b491255586b39ac4138ecca531 160 PANTHER PTHR36919 16 158 2.1E-44 T 23-04-2016 RR42_RS17745 507c51b491255586b39ac4138ecca531 160 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 40 158 2.1E-33 T 23-04-2016 IPR019223 Domain of unknown function DUF2147 RR42_RS30905 c0608e1e3092ed335bcf2b4228970bd8 387 PANTHER PTHR30290 30 312 1.5E-74 T 23-04-2016 RR42_RS30905 c0608e1e3092ed335bcf2b4228970bd8 387 PANTHER PTHR30290 329 387 1.5E-74 T 23-04-2016 RR42_RS30905 c0608e1e3092ed335bcf2b4228970bd8 387 Gene3D G3DSA:3.10.105.10 340 387 5.3E-16 T 23-04-2016 RR42_RS30905 c0608e1e3092ed335bcf2b4228970bd8 387 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 110 131 - T 23-04-2016 IPR023765 Solute-binding protein family 5, conserved site RR42_RS30905 c0608e1e3092ed335bcf2b4228970bd8 387 SUPERFAMILY SSF53850 59 387 2.9E-84 T 23-04-2016 RR42_RS30905 c0608e1e3092ed335bcf2b4228970bd8 387 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 104 387 1.7E-66 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain RR42_RS30905 c0608e1e3092ed335bcf2b4228970bd8 387 Gene3D G3DSA:3.90.76.10 74 208 1.3E-34 T 23-04-2016 RR42_RS30905 c0608e1e3092ed335bcf2b4228970bd8 387 Gene3D G3DSA:3.40.190.10 209 339 7.4E-34 T 23-04-2016 RR42_RS03965 cdda5ba1ce537bead39b9b347d016595 200 Pfam PF12728 Helix-turn-helix domain 12 61 4.7E-10 T 23-04-2016 RR42_RS03965 cdda5ba1ce537bead39b9b347d016595 200 SUPERFAMILY SSF46955 12 64 1.01E-7 T 23-04-2016 IPR009061 Putative DNA-binding domain RR42_RS03965 cdda5ba1ce537bead39b9b347d016595 200 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 12 60 1.6E-17 T 23-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 RR42_RS00835 18c0bf08a50ee687e5ae58782a880add 212 PANTHER PTHR35891:SF2 2 211 4.9E-48 T 23-04-2016 RR42_RS00835 18c0bf08a50ee687e5ae58782a880add 212 ProSitePatterns PS00194 Thioredoxin family active site. 50 68 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RR42_RS00835 18c0bf08a50ee687e5ae58782a880add 212 PANTHER PTHR35891 2 211 4.9E-48 T 23-04-2016 RR42_RS00835 18c0bf08a50ee687e5ae58782a880add 212 Pfam PF01323 DSBA-like thioredoxin domain 95 184 2.9E-13 T 23-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 RR42_RS00835 18c0bf08a50ee687e5ae58782a880add 212 PIRSF PIRSF001488 1 211 4.6E-53 T 23-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL RR42_RS00835 18c0bf08a50ee687e5ae58782a880add 212 SUPERFAMILY SSF52833 27 202 2.39E-42 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS00835 18c0bf08a50ee687e5ae58782a880add 212 Gene3D G3DSA:3.40.30.10 24 204 1.2E-60 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS20240 2e0e652711ddb60b6399935328e4c7cb 595 PANTHER PTHR24220 461 592 3.3E-113 T 23-04-2016 RR42_RS20240 2e0e652711ddb60b6399935328e4c7cb 595 PANTHER PTHR24220 345 443 3.3E-113 T 23-04-2016 RR42_RS20240 2e0e652711ddb60b6399935328e4c7cb 595 SMART SM00382 368 578 6.2E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS20240 2e0e652711ddb60b6399935328e4c7cb 595 Gene3D G3DSA:3.40.50.300 341 589 2.0E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20240 2e0e652711ddb60b6399935328e4c7cb 595 SUPERFAMILY SSF52540 343 591 1.17E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20240 2e0e652711ddb60b6399935328e4c7cb 595 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 301 2.4E-36 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RR42_RS20240 2e0e652711ddb60b6399935328e4c7cb 595 Pfam PF00005 ABC transporter 360 521 3.3E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS20240 2e0e652711ddb60b6399935328e4c7cb 595 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 572 592 4.9E-9 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RR42_RS20240 2e0e652711ddb60b6399935328e4c7cb 595 PANTHER PTHR24220:SF525 461 592 3.3E-113 T 23-04-2016 RR42_RS20240 2e0e652711ddb60b6399935328e4c7cb 595 PANTHER PTHR24220:SF525 345 443 3.3E-113 T 23-04-2016 RR42_RS11285 a3acf0a1541e6f6f956f20664180253b 145 Pfam PF03061 Thioesterase superfamily 59 130 1.4E-12 T 23-04-2016 IPR006683 Thioesterase domain RR42_RS11285 a3acf0a1541e6f6f956f20664180253b 145 PANTHER PTHR12418 36 145 1.4E-15 T 23-04-2016 RR42_RS11285 a3acf0a1541e6f6f956f20664180253b 145 SUPERFAMILY SSF54637 16 142 1.91E-27 T 23-04-2016 IPR029069 HotDog domain RR42_RS11285 a3acf0a1541e6f6f956f20664180253b 145 Gene3D G3DSA:3.10.129.10 11 144 1.8E-39 T 23-04-2016 IPR029069 HotDog domain RR42_RS08965 655c877e2bd52df1d79a6c6bb3f8320d 77 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 10 68 2.2E-18 T 23-04-2016 IPR018691 Protein of unknown function DUF2188 RR42_RS02065 3e23613a952200269c84bbcb8edd31ce 107 Pfam PF07769 psiF repeat 36 66 5.2E-17 T 23-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat RR42_RS02065 3e23613a952200269c84bbcb8edd31ce 107 Pfam PF07769 psiF repeat 76 106 1.3E-17 T 23-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat RR42_RS12615 3ad324ad27688deef0c1ec0e3120ecf0 218 SUPERFAMILY SSF51306 92 214 1.41E-32 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RR42_RS12615 3ad324ad27688deef0c1ec0e3120ecf0 218 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 167 179 2.98E-11 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RR42_RS12615 3ad324ad27688deef0c1ec0e3120ecf0 218 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 139 150 2.98E-11 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RR42_RS12615 3ad324ad27688deef0c1ec0e3120ecf0 218 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 128 138 2.98E-11 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RR42_RS12615 3ad324ad27688deef0c1ec0e3120ecf0 218 Pfam PF01726 LexA DNA binding domain 1 65 1.5E-28 T 23-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 RR42_RS12615 3ad324ad27688deef0c1ec0e3120ecf0 218 Gene3D G3DSA:1.10.10.10 1 68 4.6E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS12615 3ad324ad27688deef0c1ec0e3120ecf0 218 PANTHER PTHR33516:SF2 1 218 3.1E-81 T 23-04-2016 RR42_RS12615 3ad324ad27688deef0c1ec0e3120ecf0 218 Gene3D G3DSA:2.10.109.10 93 214 5.7E-39 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RR42_RS12615 3ad324ad27688deef0c1ec0e3120ecf0 218 PANTHER PTHR33516 1 218 3.1E-81 T 23-04-2016 RR42_RS12615 3ad324ad27688deef0c1ec0e3120ecf0 218 TIGRFAM TIGR00498 lexA: repressor LexA 1 214 9.8E-68 T 23-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 RR42_RS12615 3ad324ad27688deef0c1ec0e3120ecf0 218 Hamap MF_00015 LexA repressor [lexA]. 3 216 31.139 T 23-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 RR42_RS12615 3ad324ad27688deef0c1ec0e3120ecf0 218 Pfam PF00717 Peptidase S24-like 131 196 1.7E-13 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B RR42_RS12615 3ad324ad27688deef0c1ec0e3120ecf0 218 SUPERFAMILY SSF46785 3 68 6.81E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS18360 c733fd4d8d62d1b31994e5a7f42701e0 423 SUPERFAMILY SSF51905 301 417 1.22E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS18360 c733fd4d8d62d1b31994e5a7f42701e0 423 SUPERFAMILY SSF51905 9 194 1.22E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS18360 c733fd4d8d62d1b31994e5a7f42701e0 423 Pfam PF01494 FAD binding domain 9 372 7.0E-28 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 RR42_RS18360 c733fd4d8d62d1b31994e5a7f42701e0 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 3.0E-21 T 23-04-2016 RR42_RS18360 c733fd4d8d62d1b31994e5a7f42701e0 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 314 329 3.0E-21 T 23-04-2016 RR42_RS18360 c733fd4d8d62d1b31994e5a7f42701e0 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 173 188 3.0E-21 T 23-04-2016 RR42_RS18360 c733fd4d8d62d1b31994e5a7f42701e0 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 329 345 3.0E-21 T 23-04-2016 RR42_RS18360 c733fd4d8d62d1b31994e5a7f42701e0 423 Gene3D G3DSA:3.50.50.60 8 88 1.1E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS18360 c733fd4d8d62d1b31994e5a7f42701e0 423 Gene3D G3DSA:3.50.50.60 302 389 1.1E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS18360 c733fd4d8d62d1b31994e5a7f42701e0 423 Gene3D G3DSA:3.50.50.60 123 199 1.1E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS18360 c733fd4d8d62d1b31994e5a7f42701e0 423 PANTHER PTHR13789 1 423 3.8E-79 T 23-04-2016 RR42_RS18360 c733fd4d8d62d1b31994e5a7f42701e0 423 PANTHER PTHR13789:SF5 1 423 3.8E-79 T 23-04-2016 RR42_RS18360 c733fd4d8d62d1b31994e5a7f42701e0 423 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 328 341 - T 23-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 RR42_RS18360 c733fd4d8d62d1b31994e5a7f42701e0 423 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 11 423 4.9E-116 T 23-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 RR42_RS12570 c1b6dc98976571f6d8abd229df07530b 225 PANTHER PTHR21666 47 189 7.2E-38 T 23-04-2016 RR42_RS12570 c1b6dc98976571f6d8abd229df07530b 225 SUPERFAMILY SSF54001 60 185 1.57E-39 T 23-04-2016 RR42_RS12570 c1b6dc98976571f6d8abd229df07530b 225 Pfam PF00877 NlpC/P60 family 76 183 2.7E-27 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RR42_RS12570 c1b6dc98976571f6d8abd229df07530b 225 Gene3D G3DSA:3.90.1720.10 64 185 5.1E-42 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RR42_RS19985 5430752d630d1fb61f419642cde2f5b5 222 Pfam PF00072 Response regulator receiver domain 3 113 1.3E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS19985 5430752d630d1fb61f419642cde2f5b5 222 SMART SM00862 145 218 2.7E-12 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS19985 5430752d630d1fb61f419642cde2f5b5 222 Gene3D G3DSA:3.40.50.2300 1 123 1.5E-36 T 23-04-2016 RR42_RS19985 5430752d630d1fb61f419642cde2f5b5 222 Gene3D G3DSA:1.10.10.10 124 221 5.7E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19985 5430752d630d1fb61f419642cde2f5b5 222 SUPERFAMILY SSF52172 1 166 1.57E-36 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS19985 5430752d630d1fb61f419642cde2f5b5 222 PANTHER PTHR26402:SF316 1 221 2.9E-69 T 23-04-2016 RR42_RS19985 5430752d630d1fb61f419642cde2f5b5 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 218 1.6E-14 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS19985 5430752d630d1fb61f419642cde2f5b5 222 SMART SM00448 1 112 1.2E-33 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS19985 5430752d630d1fb61f419642cde2f5b5 222 PANTHER PTHR26402 1 221 2.9E-69 T 23-04-2016 RR42_RS18335 3b7c86db23fce01fc55fe360431c5791 448 PANTHER PTHR24220:SF589 14 297 5.0E-116 T 23-04-2016 RR42_RS18335 3b7c86db23fce01fc55fe360431c5791 448 PANTHER PTHR24220:SF589 318 427 5.0E-116 T 23-04-2016 RR42_RS18335 3b7c86db23fce01fc55fe360431c5791 448 PANTHER PTHR24220 14 297 5.0E-116 T 23-04-2016 RR42_RS18335 3b7c86db23fce01fc55fe360431c5791 448 PANTHER PTHR24220 318 427 5.0E-116 T 23-04-2016 RR42_RS18335 3b7c86db23fce01fc55fe360431c5791 448 Gene3D G3DSA:3.40.50.300 4 231 5.2E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18335 3b7c86db23fce01fc55fe360431c5791 448 Pfam PF09821 C-terminal AAA-associated domain 308 425 3.7E-36 T 23-04-2016 IPR018632 C-terminal AAA-associated domain RR42_RS18335 3b7c86db23fce01fc55fe360431c5791 448 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS18335 3b7c86db23fce01fc55fe360431c5791 448 SMART SM00382 42 224 1.3E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS18335 3b7c86db23fce01fc55fe360431c5791 448 Pfam PF00005 ABC transporter 33 172 6.0E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS18335 3b7c86db23fce01fc55fe360431c5791 448 SUPERFAMILY SSF52540 13 253 1.73E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18530 d6bfbe7a67b6db99a38028254181ad0c 490 Pfam PF00654 Voltage gated chloride channel 105 460 4.3E-74 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RR42_RS18530 d6bfbe7a67b6db99a38028254181ad0c 490 PRINTS PR00762 Chloride channel signature 410 426 1.5E-20 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RR42_RS18530 d6bfbe7a67b6db99a38028254181ad0c 490 PRINTS PR00762 Chloride channel signature 376 396 1.5E-20 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RR42_RS18530 d6bfbe7a67b6db99a38028254181ad0c 490 PRINTS PR00762 Chloride channel signature 208 227 1.5E-20 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RR42_RS18530 d6bfbe7a67b6db99a38028254181ad0c 490 PRINTS PR00762 Chloride channel signature 117 134 1.5E-20 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RR42_RS18530 d6bfbe7a67b6db99a38028254181ad0c 490 PRINTS PR00762 Chloride channel signature 428 447 1.5E-20 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RR42_RS18530 d6bfbe7a67b6db99a38028254181ad0c 490 PANTHER PTHR11689 35 469 7.4E-43 T 23-04-2016 RR42_RS18530 d6bfbe7a67b6db99a38028254181ad0c 490 SUPERFAMILY SSF81340 37 477 2.22E-87 T 23-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 RR42_RS18530 d6bfbe7a67b6db99a38028254181ad0c 490 Gene3D G3DSA:1.10.3080.10 47 472 4.2E-67 T 23-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 RR42_RS13470 8ab3758e81c60e1beb1f47ec077cad0b 344 PIRSF PIRSF002756 3 335 1.5E-106 T 23-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 RR42_RS13470 8ab3758e81c60e1beb1f47ec077cad0b 344 PANTHER PTHR30570:SF0 1 332 4.3E-134 T 23-04-2016 RR42_RS13470 8ab3758e81c60e1beb1f47ec077cad0b 344 SUPERFAMILY SSF53850 24 332 8.8E-97 T 23-04-2016 RR42_RS13470 8ab3758e81c60e1beb1f47ec077cad0b 344 Pfam PF12849 PBP superfamily domain 22 304 6.7E-62 T 23-04-2016 IPR024370 PBP domain RR42_RS13470 8ab3758e81c60e1beb1f47ec077cad0b 344 Gene3D G3DSA:3.40.190.10 23 174 7.0E-56 T 23-04-2016 RR42_RS13470 8ab3758e81c60e1beb1f47ec077cad0b 344 Gene3D G3DSA:3.40.190.10 177 334 2.4E-30 T 23-04-2016 RR42_RS13470 8ab3758e81c60e1beb1f47ec077cad0b 344 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 25 332 1.3E-125 T 23-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 RR42_RS13470 8ab3758e81c60e1beb1f47ec077cad0b 344 PANTHER PTHR30570 1 332 4.3E-134 T 23-04-2016 RR42_RS06565 ed6ee0bbe2d1eff4bb77cdd0826262e7 164 Pfam PF04214 Protein of unknown function, DUF 65 133 1.2E-29 T 23-04-2016 IPR007332 Protein of unknown function DUF411 RR42_RS06565 ed6ee0bbe2d1eff4bb77cdd0826262e7 164 Gene3D G3DSA:3.40.30.10 40 78 8.2E-4 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS15425 ed99104e5a69fc3f7bcd99d95317c04b 385 PANTHER PTHR21716:SF13 1 378 3.0E-96 T 23-04-2016 RR42_RS15425 ed99104e5a69fc3f7bcd99d95317c04b 385 PANTHER PTHR21716 1 378 3.0E-96 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like RR42_RS15425 ed99104e5a69fc3f7bcd99d95317c04b 385 Pfam PF01594 Domain of unknown function DUF20 6 334 1.1E-54 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like RR42_RS11680 c677ea8febef7a80f41220bb910c4dff 92 SUPERFAMILY SSF160272 3 90 6.15E-17 T 23-04-2016 IPR009962 Protein of unknown function DUF1488 RR42_RS11680 c677ea8febef7a80f41220bb910c4dff 92 Pfam PF07369 Protein of unknown function (DUF1488) 4 81 1.3E-23 T 23-04-2016 IPR009962 Protein of unknown function DUF1488 RR42_RS11680 c677ea8febef7a80f41220bb910c4dff 92 Gene3D G3DSA:3.30.160.140 3 76 1.1E-10 T 23-04-2016 IPR009962 Protein of unknown function DUF1488 RR42_RS17770 7db68664688626f3a05825bd66b9e950 745 PANTHER PTHR32552 14 745 7.4E-132 T 23-04-2016 RR42_RS17770 7db68664688626f3a05825bd66b9e950 745 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 164 2.1E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RR42_RS17770 7db68664688626f3a05825bd66b9e950 745 PANTHER PTHR32552:SF8 14 745 7.4E-132 T 23-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 RR42_RS17770 7db68664688626f3a05825bd66b9e950 745 Gene3D G3DSA:2.40.170.20 178 744 1.3E-133 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RR42_RS17770 7db68664688626f3a05825bd66b9e950 745 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 68 741 1.4E-89 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 RR42_RS17770 7db68664688626f3a05825bd66b9e950 745 SUPERFAMILY SSF56935 26 744 2.41E-127 T 23-04-2016 RR42_RS17770 7db68664688626f3a05825bd66b9e950 745 Pfam PF00593 TonB dependent receptor 513 743 3.2E-33 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RR42_RS17770 7db68664688626f3a05825bd66b9e950 745 Gene3D G3DSA:2.170.130.10 29 173 2.4E-35 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RR42_RS02625 a3be34e075bcf24882b5d9b77e30dcbb 142 SUPERFAMILY SSF52161 1 139 2.09E-59 T 23-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 RR42_RS02625 a3be34e075bcf24882b5d9b77e30dcbb 142 PIRSF PIRSF002181 1 142 1.1E-47 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RR42_RS02625 a3be34e075bcf24882b5d9b77e30dcbb 142 PANTHER PTHR11545 1 142 2.0E-74 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RR42_RS02625 a3be34e075bcf24882b5d9b77e30dcbb 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 141 8.8E-63 T 23-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 RR42_RS02625 a3be34e075bcf24882b5d9b77e30dcbb 142 Gene3D G3DSA:3.90.1180.10 3 141 8.0E-64 T 23-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 RR42_RS02625 a3be34e075bcf24882b5d9b77e30dcbb 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 27.816 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RR42_RS02625 a3be34e075bcf24882b5d9b77e30dcbb 142 Pfam PF00572 Ribosomal protein L13 15 138 1.2E-54 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RR42_RS01375 5ec3f3243f30f0ba6aabb7ff966a4d34 477 SUPERFAMILY SSF52283 396 477 6.8E-113 T 23-04-2016 RR42_RS01375 5ec3f3243f30f0ba6aabb7ff966a4d34 477 SUPERFAMILY SSF52283 9 147 6.8E-113 T 23-04-2016 RR42_RS01375 5ec3f3243f30f0ba6aabb7ff966a4d34 477 SUPERFAMILY SSF52283 183 230 6.8E-113 T 23-04-2016 RR42_RS01375 5ec3f3243f30f0ba6aabb7ff966a4d34 477 SMART SM00997 231 395 3.3E-110 T 23-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RR42_RS01375 5ec3f3243f30f0ba6aabb7ff966a4d34 477 PANTHER PTHR23420 8 145 0.0 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RR42_RS01375 5ec3f3243f30f0ba6aabb7ff966a4d34 477 PANTHER PTHR23420 181 477 0.0 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RR42_RS01375 5ec3f3243f30f0ba6aabb7ff966a4d34 477 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 11 469 4.5E-179 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RR42_RS01375 5ec3f3243f30f0ba6aabb7ff966a4d34 477 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 6 469 48.126 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RR42_RS01375 5ec3f3243f30f0ba6aabb7ff966a4d34 477 SMART SM00996 10 476 0.0 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RR42_RS01375 5ec3f3243f30f0ba6aabb7ff966a4d34 477 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 82 96 - T 23-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RR42_RS01375 5ec3f3243f30f0ba6aabb7ff966a4d34 477 PIRSF PIRSF001109 2 477 2.1E-186 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RR42_RS01375 5ec3f3243f30f0ba6aabb7ff966a4d34 477 Gene3D G3DSA:3.40.50.720 270 369 4.6E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS01375 5ec3f3243f30f0ba6aabb7ff966a4d34 477 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 253 269 - T 23-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RR42_RS01375 5ec3f3243f30f0ba6aabb7ff966a4d34 477 Gene3D G3DSA:3.40.50.1480 182 269 4.5E-122 T 23-04-2016 RR42_RS01375 5ec3f3243f30f0ba6aabb7ff966a4d34 477 Gene3D G3DSA:3.40.50.1480 8 146 4.5E-122 T 23-04-2016 RR42_RS01375 5ec3f3243f30f0ba6aabb7ff966a4d34 477 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 10 476 7.7E-145 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RR42_RS01375 5ec3f3243f30f0ba6aabb7ff966a4d34 477 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 231 395 1.1E-77 T 23-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RR42_RS01375 5ec3f3243f30f0ba6aabb7ff966a4d34 477 Gene3D G3DSA:3.40.50.1480 396 477 1.7E-32 T 23-04-2016 RR42_RS01375 5ec3f3243f30f0ba6aabb7ff966a4d34 477 SUPERFAMILY SSF51735 231 395 1.13E-74 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS12845 d57890bc45807f1ab30f14a27899e1dc 966 Gene3D G3DSA:2.40.30.10 868 964 5.7E-38 T 23-04-2016 RR42_RS12845 d57890bc45807f1ab30f14a27899e1dc 966 Gene3D G3DSA:2.40.30.10 638 731 1.7E-23 T 23-04-2016 RR42_RS12845 d57890bc45807f1ab30f14a27899e1dc 966 SUPERFAMILY SSF46955 3 51 4.21E-10 T 23-04-2016 IPR009061 Putative DNA-binding domain RR42_RS12845 d57890bc45807f1ab30f14a27899e1dc 966 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 388 439 9.9E-15 T 23-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal RR42_RS12845 d57890bc45807f1ab30f14a27899e1dc 966 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 1.6E-7 T 23-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal RR42_RS12845 d57890bc45807f1ab30f14a27899e1dc 966 Gene3D G3DSA:3.40.50.300 464 625 2.5E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12845 d57890bc45807f1ab30f14a27899e1dc 966 SUPERFAMILY SSF50447 869 964 1.55E-33 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RR42_RS12845 d57890bc45807f1ab30f14a27899e1dc 966 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 1.6E-12 T 23-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial RR42_RS12845 d57890bc45807f1ab30f14a27899e1dc 966 PANTHER PTHR23115:SF184 819 964 1.6E-205 T 23-04-2016 RR42_RS12845 d57890bc45807f1ab30f14a27899e1dc 966 PANTHER PTHR23115:SF184 467 794 1.6E-205 T 23-04-2016 RR42_RS12845 d57890bc45807f1ab30f14a27899e1dc 966 PANTHER PTHR23115:SF184 434 449 1.6E-205 T 23-04-2016 RR42_RS12845 d57890bc45807f1ab30f14a27899e1dc 966 PANTHER PTHR23115 819 964 1.6E-205 T 23-04-2016 RR42_RS12845 d57890bc45807f1ab30f14a27899e1dc 966 PANTHER PTHR23115 467 794 1.6E-205 T 23-04-2016 RR42_RS12845 d57890bc45807f1ab30f14a27899e1dc 966 PANTHER PTHR23115 434 449 1.6E-205 T 23-04-2016 RR42_RS12845 d57890bc45807f1ab30f14a27899e1dc 966 Pfam PF11987 Translation-initiation factor 2 752 856 4.5E-39 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 RR42_RS12845 d57890bc45807f1ab30f14a27899e1dc 966 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 964 17.659 T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 RR42_RS12845 d57890bc45807f1ab30f14a27899e1dc 966 Gene3D G3DSA:3.40.50.10050 767 845 1.6E-27 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 RR42_RS12845 d57890bc45807f1ab30f14a27899e1dc 966 Pfam PF00009 Elongation factor Tu GTP binding domain 471 627 1.0E-35 T 23-04-2016 RR42_RS12845 d57890bc45807f1ab30f14a27899e1dc 966 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 383 966 3.5E-265 T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 RR42_RS12845 d57890bc45807f1ab30f14a27899e1dc 966 SUPERFAMILY SSF52540 462 636 3.5E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12845 d57890bc45807f1ab30f14a27899e1dc 966 SUPERFAMILY SSF50447 639 721 6.86E-24 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RR42_RS12845 d57890bc45807f1ab30f14a27899e1dc 966 Gene3D G3DSA:3.30.56.50 3 51 1.9E-17 T 23-04-2016 RR42_RS12845 d57890bc45807f1ab30f14a27899e1dc 966 ProSitePatterns PS01176 Initiation factor 2 signature. 917 939 - T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 RR42_RS12845 d57890bc45807f1ab30f14a27899e1dc 966 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 469 624 3.7E-33 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RR42_RS12845 d57890bc45807f1ab30f14a27899e1dc 966 SUPERFAMILY SSF52156 744 873 6.15E-39 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 RR42_RS09895 4b3afc49ef62b3a99fbe6d04cda383f9 569 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 10 365 4.6E-63 T 23-04-2016 IPR005674 CocE/Serine esterase GO:0016787 RR42_RS09895 4b3afc49ef62b3a99fbe6d04cda383f9 569 Gene3D G3DSA:3.40.50.1820 245 339 3.1E-73 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS09895 4b3afc49ef62b3a99fbe6d04cda383f9 569 Gene3D G3DSA:3.40.50.1820 2 172 3.1E-73 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS09895 4b3afc49ef62b3a99fbe6d04cda383f9 569 PANTHER PTHR11731 61 275 4.0E-50 T 23-04-2016 RR42_RS09895 4b3afc49ef62b3a99fbe6d04cda383f9 569 PANTHER PTHR11731 1 41 4.0E-50 T 23-04-2016 RR42_RS09895 4b3afc49ef62b3a99fbe6d04cda383f9 569 Gene3D G3DSA:2.60.120.260 346 568 4.0E-51 T 23-04-2016 IPR008979 Galactose-binding domain-like RR42_RS09895 4b3afc49ef62b3a99fbe6d04cda383f9 569 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 321 559 4.4E-41 T 23-04-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 RR42_RS09895 4b3afc49ef62b3a99fbe6d04cda383f9 569 SMART SM00939 309 562 3.1E-54 T 23-04-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 RR42_RS09895 4b3afc49ef62b3a99fbe6d04cda383f9 569 SUPERFAMILY SSF49785 342 567 7.65E-44 T 23-04-2016 IPR008979 Galactose-binding domain-like RR42_RS09895 4b3afc49ef62b3a99fbe6d04cda383f9 569 PANTHER PTHR11731:SF106 61 275 4.0E-50 T 23-04-2016 RR42_RS09895 4b3afc49ef62b3a99fbe6d04cda383f9 569 PANTHER PTHR11731:SF106 1 41 4.0E-50 T 23-04-2016 RR42_RS09895 4b3afc49ef62b3a99fbe6d04cda383f9 569 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 13 295 6.6E-40 T 23-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 RR42_RS09895 4b3afc49ef62b3a99fbe6d04cda383f9 569 SUPERFAMILY SSF53474 218 344 1.23E-66 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS09895 4b3afc49ef62b3a99fbe6d04cda383f9 569 SUPERFAMILY SSF53474 3 190 1.23E-66 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS00585 bdc11b5e87703bc6ad8519401cf13f56 99 PANTHER PTHR15004 1 99 6.9E-25 T 23-04-2016 RR42_RS00585 bdc11b5e87703bc6ad8519401cf13f56 99 PANTHER PTHR15004:SF0 1 99 6.9E-25 T 23-04-2016 RR42_RS00585 bdc11b5e87703bc6ad8519401cf13f56 99 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 99 21.245 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RR42_RS00585 bdc11b5e87703bc6ad8519401cf13f56 99 SUPERFAMILY SSF141000 3 97 1.31E-25 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RR42_RS00585 bdc11b5e87703bc6ad8519401cf13f56 99 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 99 1.7E-27 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RR42_RS00585 bdc11b5e87703bc6ad8519401cf13f56 99 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 94 1.5E-15 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RR42_RS13575 263bc92512907d7daa35cf97ec030b6b 263 SUPERFAMILY SSF53335 81 222 1.61E-18 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS13575 263bc92512907d7daa35cf97ec030b6b 263 Gene3D G3DSA:3.40.50.150 82 223 5.7E-17 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS13575 263bc92512907d7daa35cf97ec030b6b 263 PANTHER PTHR10108:SF836 88 178 2.3E-16 T 23-04-2016 RR42_RS13575 263bc92512907d7daa35cf97ec030b6b 263 Pfam PF08241 Methyltransferase domain 81 130 3.7E-9 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RR42_RS13575 263bc92512907d7daa35cf97ec030b6b 263 PANTHER PTHR10108 88 178 2.3E-16 T 23-04-2016 RR42_RS00770 1f6dc24aa65fab23eaaf2b1ba1d0c071 355 Pfam PF02574 Homocysteine S-methyltransferase 31 339 4.9E-90 T 23-04-2016 IPR003726 Homocysteine-binding domain RR42_RS00770 1f6dc24aa65fab23eaaf2b1ba1d0c071 355 Gene3D G3DSA:3.20.20.330 20 350 8.7E-117 T 23-04-2016 IPR003726 Homocysteine-binding domain RR42_RS00770 1f6dc24aa65fab23eaaf2b1ba1d0c071 355 SUPERFAMILY SSF82282 22 350 1.44E-99 T 23-04-2016 IPR003726 Homocysteine-binding domain RR42_RS00770 1f6dc24aa65fab23eaaf2b1ba1d0c071 355 PANTHER PTHR21091 25 339 1.4E-152 T 23-04-2016 RR42_RS00770 1f6dc24aa65fab23eaaf2b1ba1d0c071 355 PANTHER PTHR21091:SF112 25 339 1.4E-152 T 23-04-2016 RR42_RS01470 8f05bd22b04ee12c309e79976ceed60c 263 SMART SM00448 31 142 2.7E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS01470 8f05bd22b04ee12c309e79976ceed60c 263 PANTHER PTHR26402:SF292 31 256 9.9E-49 T 23-04-2016 RR42_RS01470 8f05bd22b04ee12c309e79976ceed60c 263 SUPERFAMILY SSF52172 27 153 4.55E-31 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS01470 8f05bd22b04ee12c309e79976ceed60c 263 Pfam PF00486 Transcriptional regulatory protein, C terminal 178 253 1.6E-14 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS01470 8f05bd22b04ee12c309e79976ceed60c 263 Gene3D G3DSA:1.10.10.10 182 254 4.9E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS01470 8f05bd22b04ee12c309e79976ceed60c 263 PANTHER PTHR26402 31 256 9.9E-49 T 23-04-2016 RR42_RS01470 8f05bd22b04ee12c309e79976ceed60c 263 SMART SM00862 177 253 7.5E-12 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS01470 8f05bd22b04ee12c309e79976ceed60c 263 Gene3D G3DSA:3.40.50.2300 30 181 2.4E-29 T 23-04-2016 RR42_RS01470 8f05bd22b04ee12c309e79976ceed60c 263 Pfam PF00072 Response regulator receiver domain 33 141 7.1E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS01470 8f05bd22b04ee12c309e79976ceed60c 263 SUPERFAMILY SSF46894 163 254 3.68E-16 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS12185 09d2fc9acb4480a6271fb32b061293ce 317 PANTHER PTHR30537:SF5 1 311 7.4E-114 T 23-04-2016 RR42_RS12185 09d2fc9acb4480a6271fb32b061293ce 317 Gene3D G3DSA:1.10.10.10 4 84 5.4E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS12185 09d2fc9acb4480a6271fb32b061293ce 317 SUPERFAMILY SSF46785 4 110 2.94E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS12185 09d2fc9acb4480a6271fb32b061293ce 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 5.8E-14 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS12185 09d2fc9acb4480a6271fb32b061293ce 317 Gene3D G3DSA:3.40.190.10 177 260 9.3E-24 T 23-04-2016 RR42_RS12185 09d2fc9acb4480a6271fb32b061293ce 317 Gene3D G3DSA:3.40.190.10 92 176 4.5E-26 T 23-04-2016 RR42_RS12185 09d2fc9acb4480a6271fb32b061293ce 317 Pfam PF03466 LysR substrate binding domain 90 291 4.0E-47 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS12185 09d2fc9acb4480a6271fb32b061293ce 317 PANTHER PTHR30537 1 311 7.4E-114 T 23-04-2016 RR42_RS12185 09d2fc9acb4480a6271fb32b061293ce 317 SUPERFAMILY SSF53850 91 297 9.41E-50 T 23-04-2016 RR42_RS20090 c777b50a414acb9b78dc5308d1456644 245 SMART SM00849 13 180 3.7E-29 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS20090 c777b50a414acb9b78dc5308d1456644 245 SUPERFAMILY SSF56281 5 231 9.52E-51 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS20090 c777b50a414acb9b78dc5308d1456644 245 Gene3D G3DSA:3.60.15.10 4 229 2.8E-59 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS20090 c777b50a414acb9b78dc5308d1456644 245 Pfam PF00753 Metallo-beta-lactamase superfamily 16 180 2.6E-13 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS20090 c777b50a414acb9b78dc5308d1456644 245 PANTHER PTHR11935 4 237 1.4E-70 T 23-04-2016 RR42_RS20090 c777b50a414acb9b78dc5308d1456644 245 PANTHER PTHR11935:SF113 4 237 1.4E-70 T 23-04-2016 RR42_RS12485 8caf3b7394b3ff09fc60bfb285fc6af9 248 PANTHER PTHR24220:SF469 14 240 1.1E-84 T 23-04-2016 RR42_RS12485 8caf3b7394b3ff09fc60bfb285fc6af9 248 SMART SM00382 37 219 1.9E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS12485 8caf3b7394b3ff09fc60bfb285fc6af9 248 Pfam PF00005 ABC transporter 28 170 1.4E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS12485 8caf3b7394b3ff09fc60bfb285fc6af9 248 SUPERFAMILY SSF52540 11 234 9.13E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12485 8caf3b7394b3ff09fc60bfb285fc6af9 248 PANTHER PTHR24220 14 240 1.1E-84 T 23-04-2016 RR42_RS12485 8caf3b7394b3ff09fc60bfb285fc6af9 248 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS12485 8caf3b7394b3ff09fc60bfb285fc6af9 248 Gene3D G3DSA:3.40.50.300 10 234 7.6E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS33030 f9dab1d0795fb4677bcf94725dee3b2a 518 PANTHER PTHR23355 10 518 3.4E-179 T 23-04-2016 RR42_RS33030 f9dab1d0795fb4677bcf94725dee3b2a 518 TIGRFAM TIGR02063 RNase_R: ribonuclease R 4 517 1.9E-188 T 23-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 RR42_RS33030 f9dab1d0795fb4677bcf94725dee3b2a 518 Pfam PF08206 Ribonuclease B OB domain 41 98 2.3E-22 T 23-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain RR42_RS33030 f9dab1d0795fb4677bcf94725dee3b2a 518 SMART SM00357 40 99 1.6E-11 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 RR42_RS33030 f9dab1d0795fb4677bcf94725dee3b2a 518 SUPERFAMILY SSF50249 21 101 4.68E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS33030 f9dab1d0795fb4677bcf94725dee3b2a 518 Pfam PF00773 RNB domain 214 517 4.6E-88 T 23-04-2016 RR42_RS33030 f9dab1d0795fb4677bcf94725dee3b2a 518 PANTHER PTHR23355:SF9 10 518 3.4E-179 T 23-04-2016 RR42_RS33030 f9dab1d0795fb4677bcf94725dee3b2a 518 SUPERFAMILY SSF50249 141 456 1.23E-116 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS33030 f9dab1d0795fb4677bcf94725dee3b2a 518 SUPERFAMILY SSF50249 492 517 1.23E-116 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS33030 f9dab1d0795fb4677bcf94725dee3b2a 518 Hamap MF_01895 Ribonuclease R [rnr]. 3 518 41.32 T 23-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 RR42_RS33030 f9dab1d0795fb4677bcf94725dee3b2a 518 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 28 517 7.4E-156 T 23-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 RR42_RS33030 f9dab1d0795fb4677bcf94725dee3b2a 518 SMART SM00955 214 518 1.5E-149 T 23-04-2016 RR42_RS11475 9a29391e6517e32b181693b8aa57e44c 398 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 19 359 7.3E-159 T 23-04-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 RR42_RS11475 9a29391e6517e32b181693b8aa57e44c 398 PANTHER PTHR11228 19 354 1.7E-92 T 23-04-2016 RR42_RS11475 9a29391e6517e32b181693b8aa57e44c 398 SUPERFAMILY SSF102114 20 326 6.93E-69 T 23-04-2016 RR42_RS11475 9a29391e6517e32b181693b8aa57e44c 398 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 389 190.437 T 23-04-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 RR42_RS11475 9a29391e6517e32b181693b8aa57e44c 398 Pfam PF13186 Iron-sulfur cluster-binding domain 251 317 6.3E-9 T 23-04-2016 IPR023885 4Fe4S-binding SPASM domain RR42_RS11475 9a29391e6517e32b181693b8aa57e44c 398 Gene3D G3DSA:3.20.20.70 20 335 4.2E-65 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS11475 9a29391e6517e32b181693b8aa57e44c 398 PANTHER PTHR11228:SF32 19 354 1.7E-92 T 23-04-2016 RR42_RS11475 9a29391e6517e32b181693b8aa57e44c 398 PIRSF PIRSF037420 10 367 2.0E-111 T 23-04-2016 IPR017200 Coenzyme PQQ synthesis protein E UniPathway: UPA00539 RR42_RS11475 9a29391e6517e32b181693b8aa57e44c 398 Pfam PF04055 Radical SAM superfamily 28 170 2.6E-17 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RR42_RS11475 9a29391e6517e32b181693b8aa57e44c 398 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 253 344 3.2E-8 T 23-04-2016 IPR023885 4Fe4S-binding SPASM domain RR42_RS13130 e8dbce7edabc8ba214004b48d8f4ff80 210 PANTHER PTHR38035 2 209 7.5E-34 T 23-04-2016 RR42_RS13130 e8dbce7edabc8ba214004b48d8f4ff80 210 Pfam PF09976 Tetratricopeptide repeat-like domain 15 208 5.6E-65 T 23-04-2016 IPR018704 Tetratricopeptide repeat-like domain RR42_RS13130 e8dbce7edabc8ba214004b48d8f4ff80 210 PIRSF PIRSF006170 1 210 3.9E-57 T 23-04-2016 IPR026039 Uncharacterised protein family UPF0070 RR42_RS17870 5df0a6da607fff9ae9d985c41d022fca 556 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 369 378 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RR42_RS17870 5df0a6da607fff9ae9d985c41d022fca 556 Pfam PF02954 Bacterial regulatory protein, Fis family 483 523 2.6E-14 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS17870 5df0a6da607fff9ae9d985c41d022fca 556 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 241 256 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RR42_RS17870 5df0a6da607fff9ae9d985c41d022fca 556 SMART SM00382 175 319 1.7E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS17870 5df0a6da607fff9ae9d985c41d022fca 556 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 489 506 1.47E-10 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS17870 5df0a6da607fff9ae9d985c41d022fca 556 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 506 526 1.47E-10 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS17870 5df0a6da607fff9ae9d985c41d022fca 556 Pfam PF00072 Response regulator receiver domain 11 120 3.9E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS17870 5df0a6da607fff9ae9d985c41d022fca 556 Gene3D G3DSA:1.10.10.60 478 522 4.1E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS17870 5df0a6da607fff9ae9d985c41d022fca 556 Gene3D G3DSA:1.10.8.60 328 399 1.9E-22 T 23-04-2016 RR42_RS17870 5df0a6da607fff9ae9d985c41d022fca 556 SUPERFAMILY SSF52540 157 397 2.06E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17870 5df0a6da607fff9ae9d985c41d022fca 556 SMART SM00448 9 120 6.4E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS17870 5df0a6da607fff9ae9d985c41d022fca 556 SUPERFAMILY SSF52172 10 199 2.56E-36 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS17870 5df0a6da607fff9ae9d985c41d022fca 556 Gene3D G3DSA:3.40.50.300 155 327 6.3E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17870 5df0a6da607fff9ae9d985c41d022fca 556 SUPERFAMILY SSF46689 473 525 1.66E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS17870 5df0a6da607fff9ae9d985c41d022fca 556 SUPERFAMILY SSF46689 370 412 1.66E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS17870 5df0a6da607fff9ae9d985c41d022fca 556 PANTHER PTHR32071 451 536 9.6E-185 T 23-04-2016 RR42_RS17870 5df0a6da607fff9ae9d985c41d022fca 556 PANTHER PTHR32071 11 408 9.6E-185 T 23-04-2016 RR42_RS17870 5df0a6da607fff9ae9d985c41d022fca 556 PANTHER PTHR32071:SF28 451 536 9.6E-185 T 23-04-2016 RR42_RS17870 5df0a6da607fff9ae9d985c41d022fca 556 PANTHER PTHR32071:SF28 11 408 9.6E-185 T 23-04-2016 RR42_RS17870 5df0a6da607fff9ae9d985c41d022fca 556 Pfam PF00158 Sigma-54 interaction domain 157 321 2.0E-65 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RR42_RS17870 5df0a6da607fff9ae9d985c41d022fca 556 Gene3D G3DSA:3.40.50.2300 11 130 1.1E-31 T 23-04-2016 RR42_RS11245 a7cb88f9a0b0d7ffec1f98b23e7e2fda 97 Gene3D G3DSA:3.30.70.900 2 95 7.0E-19 T 23-04-2016 RR42_RS11245 a7cb88f9a0b0d7ffec1f98b23e7e2fda 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 19 79 2.7E-12 T 23-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain RR42_RS11245 a7cb88f9a0b0d7ffec1f98b23e7e2fda 97 SUPERFAMILY SSF54909 1 87 6.44E-19 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RR42_RS04415 2230a4eca986f140ab4126dabfbf5d22 762 SUPERFAMILY SSF52540 499 743 1.2E-92 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04415 2230a4eca986f140ab4126dabfbf5d22 762 SMART SM00382 533 719 1.6E-18 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS04415 2230a4eca986f140ab4126dabfbf5d22 762 PANTHER PTHR24221 172 752 3.7E-236 T 23-04-2016 RR42_RS04415 2230a4eca986f140ab4126dabfbf5d22 762 ProSitePatterns PS00211 ABC transporters family signature. 645 659 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS04415 2230a4eca986f140ab4126dabfbf5d22 762 Gene3D G3DSA:1.20.1560.10 174 488 6.2E-85 T 23-04-2016 RR42_RS04415 2230a4eca986f140ab4126dabfbf5d22 762 Gene3D G3DSA:3.40.50.300 507 738 1.4E-86 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04415 2230a4eca986f140ab4126dabfbf5d22 762 Pfam PF00005 ABC transporter 525 673 1.2E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS04415 2230a4eca986f140ab4126dabfbf5d22 762 SUPERFAMILY SSF90123 174 488 1.24E-78 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RR42_RS04415 2230a4eca986f140ab4126dabfbf5d22 762 Pfam PF00664 ABC transporter transmembrane region 187 460 7.2E-45 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RR42_RS10670 1dc3679e9a6c51df8876360263adb034 82 Gene3D G3DSA:1.10.1200.10 11 78 1.3E-13 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RR42_RS10670 1dc3679e9a6c51df8876360263adb034 82 Pfam PF00550 Phosphopantetheine attachment site 21 76 1.4E-7 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RR42_RS10670 1dc3679e9a6c51df8876360263adb034 82 SUPERFAMILY SSF47336 20 79 7.85E-12 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RR42_RS10670 1dc3679e9a6c51df8876360263adb034 82 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 39 78 0.003 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 RR42_RS01905 7c25bb7b92bf4e4ad481337ac180a530 253 Pfam PF02104 SURF1 family 23 234 1.5E-32 T 23-04-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 RR42_RS04590 5128da77caca609a695e6e02c795d51a 167 SMART SM00344 11 120 4.6E-48 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RR42_RS04590 5128da77caca609a695e6e02c795d51a 167 Gene3D G3DSA:3.30.70.920 64 159 3.5E-31 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RR42_RS04590 5128da77caca609a695e6e02c795d51a 167 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 9.9E-18 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS04590 5128da77caca609a695e6e02c795d51a 167 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 9.9E-18 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS04590 5128da77caca609a695e6e02c795d51a 167 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 9.9E-18 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS04590 5128da77caca609a695e6e02c795d51a 167 ProSitePatterns PS00519 AsnC-type HTH domain signature. 29 55 - T 23-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RR42_RS04590 5128da77caca609a695e6e02c795d51a 167 SUPERFAMILY SSF46785 10 70 9.0E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS04590 5128da77caca609a695e6e02c795d51a 167 PANTHER PTHR30154:SF0 3 162 1.8E-78 T 23-04-2016 RR42_RS04590 5128da77caca609a695e6e02c795d51a 167 Pfam PF13412 Winged helix-turn-helix DNA-binding 11 57 2.1E-19 T 23-04-2016 RR42_RS04590 5128da77caca609a695e6e02c795d51a 167 Gene3D G3DSA:1.10.10.10 12 63 9.9E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS04590 5128da77caca609a695e6e02c795d51a 167 PANTHER PTHR30154 3 162 1.8E-78 T 23-04-2016 RR42_RS04590 5128da77caca609a695e6e02c795d51a 167 SUPERFAMILY SSF54909 73 158 7.64E-20 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RR42_RS04590 5128da77caca609a695e6e02c795d51a 167 Pfam PF01037 Lrp/AsnC ligand binding domain 77 151 6.8E-20 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RR42_RS09020 4e8f1bba9cf84ce83e61a79b534d3bc3 216 SUPERFAMILY SSF52096 33 213 8.88E-74 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS09020 4e8f1bba9cf84ce83e61a79b534d3bc3 216 PRINTS PR00127 Clp protease catalytic subunit P signature 41 56 4.2E-52 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RR42_RS09020 4e8f1bba9cf84ce83e61a79b534d3bc3 216 PRINTS PR00127 Clp protease catalytic subunit P signature 81 101 4.2E-52 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RR42_RS09020 4e8f1bba9cf84ce83e61a79b534d3bc3 216 PRINTS PR00127 Clp protease catalytic subunit P signature 190 209 4.2E-52 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RR42_RS09020 4e8f1bba9cf84ce83e61a79b534d3bc3 216 PRINTS PR00127 Clp protease catalytic subunit P signature 133 152 4.2E-52 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RR42_RS09020 4e8f1bba9cf84ce83e61a79b534d3bc3 216 PRINTS PR00127 Clp protease catalytic subunit P signature 112 129 4.2E-52 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RR42_RS09020 4e8f1bba9cf84ce83e61a79b534d3bc3 216 Gene3D G3DSA:3.90.226.10 25 213 3.4E-88 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS09020 4e8f1bba9cf84ce83e61a79b534d3bc3 216 PANTHER PTHR10381 25 216 1.4E-135 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RR42_RS09020 4e8f1bba9cf84ce83e61a79b534d3bc3 216 PANTHER PTHR10381:SF22 25 216 1.4E-135 T 23-04-2016 RR42_RS09020 4e8f1bba9cf84ce83e61a79b534d3bc3 216 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 112 123 - T 23-04-2016 IPR018215 ClpP, Ser active site RR42_RS09020 4e8f1bba9cf84ce83e61a79b534d3bc3 216 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 24 214 7.9E-105 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RR42_RS09020 4e8f1bba9cf84ce83e61a79b534d3bc3 216 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 25 215 44.715 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RR42_RS09020 4e8f1bba9cf84ce83e61a79b534d3bc3 216 Pfam PF00574 Clp protease 35 214 1.9E-87 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RR42_RS09020 4e8f1bba9cf84ce83e61a79b534d3bc3 216 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 134 147 - T 23-04-2016 IPR033135 ClpP, histidine active site RR42_RS09595 ce268c7e172dd7ee997c765108436dbc 381 SMART SM00091 22 88 1.4E-11 T 23-04-2016 IPR000014 PAS domain RR42_RS09595 ce268c7e172dd7ee997c765108436dbc 381 SMART SM00387 273 369 2.4E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS09595 ce268c7e172dd7ee997c765108436dbc 381 PANTHER PTHR24421:SF1 126 380 2.7E-43 T 23-04-2016 RR42_RS09595 ce268c7e172dd7ee997c765108436dbc 381 SUPERFAMILY SSF55785 33 148 4.97E-26 T 23-04-2016 IPR000014 PAS domain RR42_RS09595 ce268c7e172dd7ee997c765108436dbc 381 Gene3D G3DSA:3.30.565.10 258 369 2.0E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS09595 ce268c7e172dd7ee997c765108436dbc 381 Gene3D G3DSA:3.30.450.20 18 136 2.0E-25 T 23-04-2016 RR42_RS09595 ce268c7e172dd7ee997c765108436dbc 381 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 278 368 1.2E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS09595 ce268c7e172dd7ee997c765108436dbc 381 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 146 1.0E-24 T 23-04-2016 IPR000014 PAS domain RR42_RS09595 ce268c7e172dd7ee997c765108436dbc 381 Pfam PF00989 PAS fold 23 135 2.9E-14 T 23-04-2016 IPR013767 PAS fold GO:0006355 RR42_RS09595 ce268c7e172dd7ee997c765108436dbc 381 SUPERFAMILY SSF55874 239 367 2.36E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS09595 ce268c7e172dd7ee997c765108436dbc 381 PANTHER PTHR24421 126 380 2.7E-43 T 23-04-2016 RR42_RS09595 ce268c7e172dd7ee997c765108436dbc 381 Pfam PF07730 Histidine kinase 167 236 2.2E-14 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RR42_RS12010 4622837490ac0036228d1cdc622aa03b 646 Pfam PF16326 ABC transporter C-terminal domain 576 640 1.7E-9 T 23-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 RR42_RS12010 4622837490ac0036228d1cdc622aa03b 646 SUPERFAMILY SSF52540 305 521 2.99E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12010 4622837490ac0036228d1cdc622aa03b 646 SUPERFAMILY SSF52540 119 257 1.01E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12010 4622837490ac0036228d1cdc622aa03b 646 SUPERFAMILY SSF52540 2 92 1.01E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12010 4622837490ac0036228d1cdc622aa03b 646 ProSitePatterns PS00211 ABC transporters family signature. 438 452 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS12010 4622837490ac0036228d1cdc622aa03b 646 SMART SM00382 26 225 8.9E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS12010 4622837490ac0036228d1cdc622aa03b 646 SMART SM00382 344 511 5.5E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS12010 4622837490ac0036228d1cdc622aa03b 646 PANTHER PTHR19211:SF49 2 567 0.0 T 23-04-2016 RR42_RS12010 4622837490ac0036228d1cdc622aa03b 646 Gene3D G3DSA:3.40.50.300 2 266 8.6E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12010 4622837490ac0036228d1cdc622aa03b 646 Gene3D G3DSA:3.40.50.300 311 536 3.6E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12010 4622837490ac0036228d1cdc622aa03b 646 Pfam PF12848 ABC transporter 217 292 4.3E-28 T 23-04-2016 IPR032781 ABC-transporter extension domain RR42_RS12010 4622837490ac0036228d1cdc622aa03b 646 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS12010 4622837490ac0036228d1cdc622aa03b 646 PANTHER PTHR19211 2 567 0.0 T 23-04-2016 RR42_RS12010 4622837490ac0036228d1cdc622aa03b 646 Pfam PF00005 ABC transporter 18 178 3.7E-22 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS12010 4622837490ac0036228d1cdc622aa03b 646 Pfam PF00005 ABC transporter 335 466 6.8E-23 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS11825 79526cfe4913046402ed3c659c55efe5 368 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 95 2.4E-21 T 23-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 RR42_RS11825 79526cfe4913046402ed3c659c55efe5 368 Gene3D G3DSA:2.160.10.10 154 309 7.0E-33 T 23-04-2016 RR42_RS11825 79526cfe4913046402ed3c659c55efe5 368 Gene3D G3DSA:2.160.10.10 106 153 4.3E-10 T 23-04-2016 RR42_RS11825 79526cfe4913046402ed3c659c55efe5 368 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 343 7.8E-102 T 23-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 RR42_RS11825 79526cfe4913046402ed3c659c55efe5 368 SUPERFAMILY SSF51161 32 330 1.1E-71 T 23-04-2016 IPR011004 Trimeric LpxA-like RR42_RS11825 79526cfe4913046402ed3c659c55efe5 368 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 154 188 2.3E-8 T 23-04-2016 IPR001451 Hexapeptide repeat RR42_RS11825 79526cfe4913046402ed3c659c55efe5 368 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 235 270 2.9E-7 T 23-04-2016 IPR001451 Hexapeptide repeat RR42_RS11825 79526cfe4913046402ed3c659c55efe5 368 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 148 2.7E-4 T 23-04-2016 IPR001451 Hexapeptide repeat RR42_RS11825 79526cfe4913046402ed3c659c55efe5 368 PANTHER PTHR22572 108 308 4.4E-44 T 23-04-2016 RR42_RS11825 79526cfe4913046402ed3c659c55efe5 368 PANTHER PTHR22572:SF117 108 308 4.4E-44 T 23-04-2016 RR42_RS11825 79526cfe4913046402ed3c659c55efe5 368 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 340 35.804 T 23-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 RR42_RS03705 999a055c128814ed5b78d0904d9f9db0 257 SUPERFAMILY SSF56524 53 256 1.7E-62 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RR42_RS03705 999a055c128814ed5b78d0904d9f9db0 257 PANTHER PTHR19372 7 255 1.5E-105 T 23-04-2016 RR42_RS03705 999a055c128814ed5b78d0904d9f9db0 257 PANTHER PTHR19372:SF9 7 255 1.5E-105 T 23-04-2016 RR42_RS03705 999a055c128814ed5b78d0904d9f9db0 257 Gene3D G3DSA:3.90.420.10 99 255 1.2E-50 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RR42_RS03705 999a055c128814ed5b78d0904d9f9db0 257 Pfam PF00174 Oxidoreductase molybdopterin binding domain 102 246 4.9E-29 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RR42_RS14605 3b54672d29abe85913159dd624763174 217 PANTHER PTHR30086:SF3 9 217 1.7E-51 T 23-04-2016 RR42_RS14605 3b54672d29abe85913159dd624763174 217 PANTHER PTHR30086 9 217 1.7E-51 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RR42_RS14605 3b54672d29abe85913159dd624763174 217 PIRSF PIRSF006324 8 212 1.7E-49 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RR42_RS14605 3b54672d29abe85913159dd624763174 217 Pfam PF01810 LysE type translocator 20 210 5.6E-25 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RR42_RS22120 0f2e69ed6961980be98f86ba890f495f 168 PANTHER PTHR22855:SF40 27 152 1.3E-29 T 23-04-2016 RR42_RS22120 0f2e69ed6961980be98f86ba890f495f 168 Gene3D G3DSA:3.90.226.10 24 163 8.6E-29 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS22120 0f2e69ed6961980be98f86ba890f495f 168 Pfam PF01039 Carboxyl transferase domain 49 153 4.4E-14 T 23-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RR42_RS22120 0f2e69ed6961980be98f86ba890f495f 168 PANTHER PTHR22855 27 152 1.3E-29 T 23-04-2016 RR42_RS22120 0f2e69ed6961980be98f86ba890f495f 168 SUPERFAMILY SSF52096 23 158 3.02E-29 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS07660 80b6db567e654d0e5112a1f1d0a34888 284 SUPERFAMILY SSF56784 74 282 1.13E-44 T 23-04-2016 IPR023214 HAD-like domain RR42_RS07660 80b6db567e654d0e5112a1f1d0a34888 284 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 77 249 2.7E-26 T 23-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 RR42_RS07660 80b6db567e654d0e5112a1f1d0a34888 284 PANTHER PTHR10000:SF7 76 281 1.3E-76 T 23-04-2016 RR42_RS07660 80b6db567e654d0e5112a1f1d0a34888 284 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 72 281 3.0E-67 T 23-04-2016 RR42_RS07660 80b6db567e654d0e5112a1f1d0a34888 284 Pfam PF12710 haloacid dehalogenase-like hydrolase 79 247 2.1E-16 T 23-04-2016 RR42_RS07660 80b6db567e654d0e5112a1f1d0a34888 284 Pfam PF13284 Domain of unknown function (DUF4072) 3 52 5.4E-9 T 23-04-2016 IPR025138 Domain of unknown function DUF4072 RR42_RS07660 80b6db567e654d0e5112a1f1d0a34888 284 Gene3D G3DSA:1.10.150.210 87 138 4.9E-27 T 23-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 RR42_RS07660 80b6db567e654d0e5112a1f1d0a34888 284 PANTHER PTHR10000 76 281 1.3E-76 T 23-04-2016 RR42_RS07660 80b6db567e654d0e5112a1f1d0a34888 284 Gene3D G3DSA:3.40.50.1000 139 269 2.9E-38 T 23-04-2016 IPR023214 HAD-like domain RR42_RS13090 e0ed1089b5bafdb6709e5faca3d9ac58 446 SUPERFAMILY SSF52540 11 444 4.14E-170 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13090 e0ed1089b5bafdb6709e5faca3d9ac58 446 Gene3D G3DSA:3.90.170.10 274 440 6.6E-64 T 23-04-2016 RR42_RS13090 e0ed1089b5bafdb6709e5faca3d9ac58 446 Pfam PF00709 Adenylosuccinate synthetase 12 438 8.2E-171 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RR42_RS13090 e0ed1089b5bafdb6709e5faca3d9ac58 446 Gene3D G3DSA:3.40.440.10 11 101 5.6E-67 T 23-04-2016 RR42_RS13090 e0ed1089b5bafdb6709e5faca3d9ac58 446 Gene3D G3DSA:3.40.440.10 204 273 5.6E-67 T 23-04-2016 RR42_RS13090 e0ed1089b5bafdb6709e5faca3d9ac58 446 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 446 209.745 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RR42_RS13090 e0ed1089b5bafdb6709e5faca3d9ac58 446 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 140 151 - T 23-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 RR42_RS13090 e0ed1089b5bafdb6709e5faca3d9ac58 446 SMART SM00788 11 439 1.7E-290 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RR42_RS13090 e0ed1089b5bafdb6709e5faca3d9ac58 446 Gene3D G3DSA:1.10.300.10 111 203 1.6E-36 T 23-04-2016 RR42_RS13090 e0ed1089b5bafdb6709e5faca3d9ac58 446 PANTHER PTHR11846 5 443 4.8E-228 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RR42_RS13090 e0ed1089b5bafdb6709e5faca3d9ac58 446 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 13 444 2.7E-173 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RR42_RS13090 e0ed1089b5bafdb6709e5faca3d9ac58 446 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 18 25 - T 23-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RR42_RS18735 083ca5811b34cfbb6a04596ce05db076 122 Pfam PF01381 Helix-turn-helix 17 71 2.5E-13 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RR42_RS18735 083ca5811b34cfbb6a04596ce05db076 122 SMART SM00530 16 71 1.2E-12 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RR42_RS18735 083ca5811b34cfbb6a04596ce05db076 122 Gene3D G3DSA:1.10.260.40 2 79 6.4E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS18735 083ca5811b34cfbb6a04596ce05db076 122 SUPERFAMILY SSF47413 10 83 1.05E-15 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS19740 94bd69db04270c558fafc34e6aeaa8b8 307 SUPERFAMILY SSF53790 16 240 1.22E-72 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RR42_RS19740 94bd69db04270c558fafc34e6aeaa8b8 307 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 95 106 - T 23-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RR42_RS19740 94bd69db04270c558fafc34e6aeaa8b8 307 PANTHER PTHR21091 1 241 7.4E-69 T 23-04-2016 RR42_RS19740 94bd69db04270c558fafc34e6aeaa8b8 307 PIRSF PIRSF005917 7 298 4.6E-92 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RR42_RS19740 94bd69db04270c558fafc34e6aeaa8b8 307 Gene3D G3DSA:3.30.950.10 125 243 6.2E-33 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 RR42_RS19740 94bd69db04270c558fafc34e6aeaa8b8 307 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 17 221 1.7E-27 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RR42_RS19740 94bd69db04270c558fafc34e6aeaa8b8 307 PANTHER PTHR21091:SF18 1 241 7.4E-69 T 23-04-2016 RR42_RS19740 94bd69db04270c558fafc34e6aeaa8b8 307 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 17 242 34.282 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RR42_RS19740 94bd69db04270c558fafc34e6aeaa8b8 307 Gene3D G3DSA:3.40.1010.10 16 124 5.6E-12 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 RR42_RS19740 94bd69db04270c558fafc34e6aeaa8b8 307 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 18 294 4.0E-70 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RR42_RS14355 87d4293cd0bd0ba052359f63f5690b68 302 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 46 52 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RR42_RS14355 87d4293cd0bd0ba052359f63f5690b68 302 Pfam PF01555 DNA methylase 43 261 9.1E-47 T 23-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 RR42_RS14355 87d4293cd0bd0ba052359f63f5690b68 302 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 42 56 2.0E-28 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RR42_RS14355 87d4293cd0bd0ba052359f63f5690b68 302 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 204 221 2.0E-28 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RR42_RS14355 87d4293cd0bd0ba052359f63f5690b68 302 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 223 241 2.0E-28 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RR42_RS14355 87d4293cd0bd0ba052359f63f5690b68 302 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 246 266 2.0E-28 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RR42_RS14355 87d4293cd0bd0ba052359f63f5690b68 302 SUPERFAMILY SSF53335 22 266 6.4E-68 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS14355 87d4293cd0bd0ba052359f63f5690b68 302 PANTHER PTHR13370 25 267 6.7E-35 T 23-04-2016 RR42_RS14355 87d4293cd0bd0ba052359f63f5690b68 302 Gene3D G3DSA:3.40.50.150 24 270 2.9E-65 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS14355 87d4293cd0bd0ba052359f63f5690b68 302 PANTHER PTHR13370:SF8 25 267 6.7E-35 T 23-04-2016 RR42_RS09535 bdf5185adabab9146e571a65f4973277 356 Gene3D G3DSA:1.10.10.60 283 330 1.9E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS09535 bdf5185adabab9146e571a65f4973277 356 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 284 327 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RR42_RS09535 bdf5185adabab9146e571a65f4973277 356 SUPERFAMILY SSF46689 284 331 5.02E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS09535 bdf5185adabab9146e571a65f4973277 356 SMART SM00342 249 331 3.1E-15 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RR42_RS09535 bdf5185adabab9146e571a65f4973277 356 PANTHER PTHR11019:SF50 221 347 3.3E-15 T 23-04-2016 RR42_RS09535 bdf5185adabab9146e571a65f4973277 356 PANTHER PTHR11019 221 347 3.3E-15 T 23-04-2016 RR42_RS09535 bdf5185adabab9146e571a65f4973277 356 Pfam PF12833 Helix-turn-helix domain 258 330 3.2E-14 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RR42_RS17305 ae5ea252e63b31906c00d4066ff84684 323 PANTHER PTHR11537:SF137 15 250 1.7E-89 T 23-04-2016 RR42_RS17305 ae5ea252e63b31906c00d4066ff84684 323 Pfam PF00520 Ion transport protein 44 253 2.3E-25 T 23-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 RR42_RS17305 ae5ea252e63b31906c00d4066ff84684 323 SUPERFAMILY SSF81324 44 254 1.9E-49 T 23-04-2016 RR42_RS17305 ae5ea252e63b31906c00d4066ff84684 323 Gene3D G3DSA:1.10.287.70 45 254 3.8E-49 T 23-04-2016 RR42_RS17305 ae5ea252e63b31906c00d4066ff84684 323 PRINTS PR00169 Potassium channel signature 141 167 1.9E-27 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 RR42_RS17305 ae5ea252e63b31906c00d4066ff84684 323 PRINTS PR00169 Potassium channel signature 199 221 1.9E-27 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 RR42_RS17305 ae5ea252e63b31906c00d4066ff84684 323 PRINTS PR00169 Potassium channel signature 37 65 1.9E-27 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 RR42_RS17305 ae5ea252e63b31906c00d4066ff84684 323 PRINTS PR00169 Potassium channel signature 79 102 1.9E-27 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 RR42_RS17305 ae5ea252e63b31906c00d4066ff84684 323 PRINTS PR00169 Potassium channel signature 228 254 1.9E-27 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 RR42_RS17305 ae5ea252e63b31906c00d4066ff84684 323 PRINTS PR00169 Potassium channel signature 105 125 1.9E-27 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 RR42_RS17305 ae5ea252e63b31906c00d4066ff84684 323 PRINTS PR00169 Potassium channel signature 170 193 1.9E-27 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 RR42_RS17305 ae5ea252e63b31906c00d4066ff84684 323 PANTHER PTHR11537 15 250 1.7E-89 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 RR42_RS05180 50959dc2c501086d9a9d358d084a6413 611 Pfam PF08309 LVIVD repeat 153 172 0.45 T 23-04-2016 IPR013211 LVIVD RR42_RS07725 8474d2dfaaf9337ceaa7ed60189b430c 159 SUPERFAMILY SSF52540 1 143 2.6E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07725 8474d2dfaaf9337ceaa7ed60189b430c 159 Gene3D G3DSA:3.40.50.300 1 141 4.6E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07725 8474d2dfaaf9337ceaa7ed60189b430c 159 Pfam PF00005 ABC transporter 1 118 1.9E-16 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS07725 8474d2dfaaf9337ceaa7ed60189b430c 159 PANTHER PTHR24220 1 139 2.1E-53 T 23-04-2016 RR42_RS07725 8474d2dfaaf9337ceaa7ed60189b430c 159 PANTHER PTHR24220:SF577 1 139 2.1E-53 T 23-04-2016 RR42_RS08905 52af293dfa44f85d0d96e75874708db9 225 SUPERFAMILY SSF52172 6 136 7.26E-31 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS08905 52af293dfa44f85d0d96e75874708db9 225 SMART SM00421 162 219 6.9E-25 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS08905 52af293dfa44f85d0d96e75874708db9 225 Pfam PF00196 Bacterial regulatory proteins, luxR family 164 218 1.7E-22 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS08905 52af293dfa44f85d0d96e75874708db9 225 ProSitePatterns PS00622 LuxR-type HTH domain signature. 179 206 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS08905 52af293dfa44f85d0d96e75874708db9 225 Gene3D G3DSA:3.40.50.2300 6 124 7.7E-33 T 23-04-2016 RR42_RS08905 52af293dfa44f85d0d96e75874708db9 225 PANTHER PTHR26402:SF458 7 217 6.4E-67 T 23-04-2016 RR42_RS08905 52af293dfa44f85d0d96e75874708db9 225 Pfam PF00072 Response regulator receiver domain 10 120 1.4E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS08905 52af293dfa44f85d0d96e75874708db9 225 Gene3D G3DSA:1.10.10.10 125 222 1.5E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS08905 52af293dfa44f85d0d96e75874708db9 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 179 1.0E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS08905 52af293dfa44f85d0d96e75874708db9 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 195 1.0E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS08905 52af293dfa44f85d0d96e75874708db9 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 195 207 1.0E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS08905 52af293dfa44f85d0d96e75874708db9 225 PANTHER PTHR26402 7 217 6.4E-67 T 23-04-2016 RR42_RS08905 52af293dfa44f85d0d96e75874708db9 225 SUPERFAMILY SSF46894 156 223 4.42E-21 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS08905 52af293dfa44f85d0d96e75874708db9 225 SMART SM00448 7 120 1.5E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS05435 793c9131ce692286f5e138000e229d12 586 Gene3D G3DSA:3.40.50.970 19 195 1.1E-74 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS05435 793c9131ce692286f5e138000e229d12 586 PANTHER PTHR18968:SF116 1 581 0.0 T 23-04-2016 RR42_RS05435 793c9131ce692286f5e138000e229d12 586 SUPERFAMILY SSF52467 203 376 1.07E-63 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RR42_RS05435 793c9131ce692286f5e138000e229d12 586 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 20 580 3.5E-257 T 23-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RR42_RS05435 793c9131ce692286f5e138000e229d12 586 Gene3D G3DSA:3.40.50.1220 204 372 7.3E-66 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RR42_RS05435 793c9131ce692286f5e138000e229d12 586 PANTHER PTHR18968 1 581 0.0 T 23-04-2016 RR42_RS05435 793c9131ce692286f5e138000e229d12 586 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 210 346 1.5E-46 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RR42_RS05435 793c9131ce692286f5e138000e229d12 586 Gene3D G3DSA:3.40.50.970 373 574 1.5E-75 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS05435 793c9131ce692286f5e138000e229d12 586 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 22 185 6.4E-59 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RR42_RS05435 793c9131ce692286f5e138000e229d12 586 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 409 557 1.9E-49 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RR42_RS05435 793c9131ce692286f5e138000e229d12 586 SUPERFAMILY SSF52518 387 581 1.06E-67 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS05435 793c9131ce692286f5e138000e229d12 586 SUPERFAMILY SSF52518 19 198 3.03E-64 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS08755 2de131e1605abb0dca7e9f3613bc344e 374 SMART SM00729 43 257 6.5E-11 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RR42_RS08755 2de131e1605abb0dca7e9f3613bc344e 374 Pfam PF06463 Molybdenum Cofactor Synthesis C 224 350 6.0E-37 T 23-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 RR42_RS08755 2de131e1605abb0dca7e9f3613bc344e 374 Gene3D G3DSA:3.20.20.70 36 338 3.9E-77 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS08755 2de131e1605abb0dca7e9f3613bc344e 374 PANTHER PTHR22960 36 322 8.0E-115 T 23-04-2016 RR42_RS08755 2de131e1605abb0dca7e9f3613bc344e 374 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 49 60 - T 23-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 RR42_RS08755 2de131e1605abb0dca7e9f3613bc344e 374 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 35 374 9.6E-117 T 23-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 RR42_RS08755 2de131e1605abb0dca7e9f3613bc344e 374 Pfam PF13353 4Fe-4S single cluster domain 51 137 3.5E-9 T 23-04-2016 RR42_RS08755 2de131e1605abb0dca7e9f3613bc344e 374 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 34 374 40.715 T 23-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 RR42_RS08755 2de131e1605abb0dca7e9f3613bc344e 374 Pfam PF04055 Radical SAM superfamily 47 214 2.5E-30 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RR42_RS08755 2de131e1605abb0dca7e9f3613bc344e 374 SUPERFAMILY SSF102114 36 335 4.84E-78 T 23-04-2016 RR42_RS11310 187dc7f8f2070b692187f6f5101207dd 362 Pfam PF13609 Gram-negative porin 7 326 1.0E-49 T 23-04-2016 RR42_RS11310 187dc7f8f2070b692187f6f5101207dd 362 Gene3D G3DSA:2.40.160.10 21 362 8.3E-94 T 23-04-2016 IPR023614 Porin domain RR42_RS11310 187dc7f8f2070b692187f6f5101207dd 362 SUPERFAMILY SSF56935 21 362 1.95E-84 T 23-04-2016 RR42_RS29185 d56ec223c65f151c40daa2fff214a960 156 Gene3D G3DSA:3.40.50.10490 42 156 8.9E-49 T 23-04-2016 RR42_RS29185 d56ec223c65f151c40daa2fff214a960 156 PANTHER PTHR11469 1 156 4.1E-87 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS29185 d56ec223c65f151c40daa2fff214a960 156 Pfam PF00342 Phosphoglucose isomerase 2 156 9.6E-63 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS29185 d56ec223c65f151c40daa2fff214a960 156 Gene3D G3DSA:3.40.50.10490 1 41 3.1E-11 T 23-04-2016 RR42_RS29185 d56ec223c65f151c40daa2fff214a960 156 SUPERFAMILY SSF53697 1 156 8.34E-59 T 23-04-2016 RR42_RS19855 789ebfba29152ccb6bb754de82e6b828 260 Gene3D G3DSA:3.20.20.150 1 254 4.5E-90 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RR42_RS19855 789ebfba29152ccb6bb754de82e6b828 260 PANTHER PTHR12110:SF3 1 253 1.5E-91 T 23-04-2016 RR42_RS19855 789ebfba29152ccb6bb754de82e6b828 260 TIGRFAM TIGR03234 OH-pyruv-isom: hydroxypyruvate isomerase 2 253 2.0E-112 T 23-04-2016 IPR017643 Hydroxypyruvate isomerase KEGG: 00630+5.3.1.22 RR42_RS19855 789ebfba29152ccb6bb754de82e6b828 260 SUPERFAMILY SSF51658 1 255 2.09E-82 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RR42_RS19855 789ebfba29152ccb6bb754de82e6b828 260 Pfam PF01261 Xylose isomerase-like TIM barrel 21 218 8.9E-32 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RR42_RS19855 789ebfba29152ccb6bb754de82e6b828 260 PANTHER PTHR12110 1 253 1.5E-91 T 23-04-2016 RR42_RS19855 789ebfba29152ccb6bb754de82e6b828 260 PIRSF PIRSF006241 1 259 3.9E-94 T 23-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 RR42_RS15735 305c868e7ffc321006d4a8087472b422 384 Gene3D G3DSA:3.40.640.10 5 256 3.5E-90 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS15735 305c868e7ffc321006d4a8087472b422 384 SUPERFAMILY SSF53383 5 383 4.89E-121 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS15735 305c868e7ffc321006d4a8087472b422 384 PANTHER PTHR30244 1 384 1.9E-149 T 23-04-2016 RR42_RS15735 305c868e7ffc321006d4a8087472b422 384 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 380 5.1E-137 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RR42_RS15735 305c868e7ffc321006d4a8087472b422 384 Gene3D G3DSA:3.90.1150.10 259 383 1.9E-41 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS15735 305c868e7ffc321006d4a8087472b422 384 PIRSF PIRSF000390 1 384 1.7E-117 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RR42_RS15735 305c868e7ffc321006d4a8087472b422 384 PANTHER PTHR30244:SF3 1 384 1.9E-149 T 23-04-2016 RR42_RS15210 a51247fd4a8d41f531ec09322d560a9f 205 SUPERFAMILY SSF50475 11 181 1.29E-40 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RR42_RS15210 a51247fd4a8d41f531ec09322d560a9f 205 PANTHER PTHR35802:SF1 2 202 1.2E-47 T 23-04-2016 RR42_RS15210 a51247fd4a8d41f531ec09322d560a9f 205 PIRSF PIRSF010372 1 204 1.2E-56 T 23-04-2016 IPR007396 Transcriptional regulator PAI 2-type RR42_RS15210 a51247fd4a8d41f531ec09322d560a9f 205 Gene3D G3DSA:2.30.110.10 1 202 4.8E-63 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RR42_RS15210 a51247fd4a8d41f531ec09322d560a9f 205 Pfam PF04299 Putative FMN-binding domain 1 161 8.3E-47 T 23-04-2016 IPR007396 Transcriptional regulator PAI 2-type RR42_RS15210 a51247fd4a8d41f531ec09322d560a9f 205 PANTHER PTHR35802 2 202 1.2E-47 T 23-04-2016 RR42_RS17285 0c52348266ce6107af16826bc8c207d2 472 SUPERFAMILY SSF55103 231 469 3.27E-76 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RR42_RS17285 0c52348266ce6107af16826bc8c207d2 472 Gene3D G3DSA:3.30.43.10 11 108 1.6E-27 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RR42_RS17285 0c52348266ce6107af16826bc8c207d2 472 PANTHER PTHR11748 18 468 6.4E-232 T 23-04-2016 RR42_RS17285 0c52348266ce6107af16826bc8c207d2 472 SUPERFAMILY SSF56176 19 227 1.36E-68 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RR42_RS17285 0c52348266ce6107af16826bc8c207d2 472 Pfam PF01565 FAD binding domain 53 189 3.8E-39 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RR42_RS17285 0c52348266ce6107af16826bc8c207d2 472 PANTHER PTHR11748:SF97 18 468 6.4E-232 T 23-04-2016 RR42_RS17285 0c52348266ce6107af16826bc8c207d2 472 Gene3D G3DSA:1.10.45.10 428 467 1.7E-17 T 23-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RR42_RS17285 0c52348266ce6107af16826bc8c207d2 472 Gene3D G3DSA:3.30.465.10 109 227 1.0E-46 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RR42_RS17285 0c52348266ce6107af16826bc8c207d2 472 Pfam PF02913 FAD linked oxidases, C-terminal domain 227 467 3.6E-66 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RR42_RS13735 448a6b4ae38a49d16e36ff3f87e4d4b2 332 PANTHER PTHR30160 3 283 2.7E-41 T 23-04-2016 RR42_RS13735 448a6b4ae38a49d16e36ff3f87e4d4b2 332 SUPERFAMILY SSF53756 2 313 1.02E-63 T 23-04-2016 RR42_RS13735 448a6b4ae38a49d16e36ff3f87e4d4b2 332 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 3 316 1.2E-88 T 23-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 RR42_RS13735 448a6b4ae38a49d16e36ff3f87e4d4b2 332 Gene3D G3DSA:3.40.50.2000 2 145 4.4E-35 T 23-04-2016 RR42_RS13735 448a6b4ae38a49d16e36ff3f87e4d4b2 332 PANTHER PTHR30160:SF8 3 283 2.7E-41 T 23-04-2016 RR42_RS13735 448a6b4ae38a49d16e36ff3f87e4d4b2 332 Gene3D G3DSA:3.40.50.2000 175 296 7.6E-28 T 23-04-2016 RR42_RS13735 448a6b4ae38a49d16e36ff3f87e4d4b2 332 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 81 293 8.5E-39 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 RR42_RS00900 3b7455c1fc9b5019850fd968b614ccc9 233 PIRSF PIRSF006386 1 208 2.2E-57 T 23-04-2016 IPR014440 HCCA isomerase/glutathione S-transferase kappa RR42_RS00900 3b7455c1fc9b5019850fd968b614ccc9 233 PANTHER PTHR13887:SF22 1 199 4.6E-38 T 23-04-2016 RR42_RS00900 3b7455c1fc9b5019850fd968b614ccc9 233 SUPERFAMILY SSF52833 2 199 1.95E-43 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS00900 3b7455c1fc9b5019850fd968b614ccc9 233 PANTHER PTHR13887 1 199 4.6E-38 T 23-04-2016 RR42_RS00900 3b7455c1fc9b5019850fd968b614ccc9 233 Gene3D G3DSA:3.40.30.10 2 197 1.0E-55 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS00900 3b7455c1fc9b5019850fd968b614ccc9 233 Pfam PF01323 DSBA-like thioredoxin domain 5 196 2.2E-35 T 23-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 RR42_RS20635 1d6df7241d343230b4b05b99de8afae8 371 Gene3D G3DSA:3.40.190.10 150 290 9.1E-56 T 23-04-2016 RR42_RS20635 1d6df7241d343230b4b05b99de8afae8 371 Gene3D G3DSA:3.40.190.10 291 366 4.2E-51 T 23-04-2016 RR42_RS20635 1d6df7241d343230b4b05b99de8afae8 371 Gene3D G3DSA:3.40.190.10 2 149 4.2E-51 T 23-04-2016 RR42_RS20635 1d6df7241d343230b4b05b99de8afae8 371 SUPERFAMILY SSF53850 45 352 3.32E-42 T 23-04-2016 RR42_RS20635 1d6df7241d343230b4b05b99de8afae8 371 PANTHER PTHR30006 24 369 3.1E-68 T 23-04-2016 RR42_RS20635 1d6df7241d343230b4b05b99de8afae8 371 Pfam PF13531 Bacterial extracellular solute-binding protein 50 310 2.8E-13 T 23-04-2016 RR42_RS20635 1d6df7241d343230b4b05b99de8afae8 371 PANTHER PTHR30006:SF10 24 369 3.1E-68 T 23-04-2016 RR42_RS15185 619e5f74583bd99df03044d3a538dc78 305 Gene3D G3DSA:3.40.190.10 89 191 3.9E-19 T 23-04-2016 RR42_RS15185 619e5f74583bd99df03044d3a538dc78 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.24E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS15185 619e5f74583bd99df03044d3a538dc78 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.24E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS15185 619e5f74583bd99df03044d3a538dc78 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.24E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS15185 619e5f74583bd99df03044d3a538dc78 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 6.8E-16 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS15185 619e5f74583bd99df03044d3a538dc78 305 SUPERFAMILY SSF46785 4 80 6.8E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS15185 619e5f74583bd99df03044d3a538dc78 305 SUPERFAMILY SSF53850 90 294 3.68E-29 T 23-04-2016 RR42_RS15185 619e5f74583bd99df03044d3a538dc78 305 Gene3D G3DSA:3.40.190.10 192 257 2.0E-11 T 23-04-2016 RR42_RS15185 619e5f74583bd99df03044d3a538dc78 305 Gene3D G3DSA:1.10.10.10 3 80 4.4E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS15185 619e5f74583bd99df03044d3a538dc78 305 Pfam PF03466 LysR substrate binding domain 90 289 6.5E-30 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS15185 619e5f74583bd99df03044d3a538dc78 305 PANTHER PTHR30126 1 277 8.6E-48 T 23-04-2016 RR42_RS13030 3dd4cfb1820888e7192e67865834c6cd 1367 Gene3D G3DSA:3.40.50.300 337 474 3.4E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13030 3dd4cfb1820888e7192e67865834c6cd 1367 SUPERFAMILY SSF52540 112 665 3.26E-96 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13030 3dd4cfb1820888e7192e67865834c6cd 1367 Pfam PF11898 Domain of unknown function (DUF3418) 774 1363 3.2E-219 T 23-04-2016 IPR024590 RNA helicase HrpA, C-terminal RR42_RS13030 3dd4cfb1820888e7192e67865834c6cd 1367 SMART SM00847 522 616 3.5E-35 T 23-04-2016 IPR007502 Helicase-associated domain GO:0004386 RR42_RS13030 3dd4cfb1820888e7192e67865834c6cd 1367 Pfam PF00271 Helicase conserved C-terminal domain 345 461 5.3E-10 T 23-04-2016 IPR001650 Helicase, C-terminal RR42_RS13030 3dd4cfb1820888e7192e67865834c6cd 1367 Pfam PF04408 Helicase associated domain (HA2) 525 598 2.6E-17 T 23-04-2016 IPR007502 Helicase-associated domain GO:0004386 RR42_RS13030 3dd4cfb1820888e7192e67865834c6cd 1367 SMART SM00490 362 462 1.5E-14 T 23-04-2016 IPR001650 Helicase, C-terminal RR42_RS13030 3dd4cfb1820888e7192e67865834c6cd 1367 PANTHER PTHR18934 801 929 2.4E-299 T 23-04-2016 RR42_RS13030 3dd4cfb1820888e7192e67865834c6cd 1367 PANTHER PTHR18934 113 766 2.4E-299 T 23-04-2016 RR42_RS13030 3dd4cfb1820888e7192e67865834c6cd 1367 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 101 1363 0.0 T 23-04-2016 IPR010222 RNA helicase HrpA GO:0004004 RR42_RS13030 3dd4cfb1820888e7192e67865834c6cd 1367 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 666 760 6.9E-13 T 23-04-2016 IPR011709 Domain of unknown function DUF1605 RR42_RS13030 3dd4cfb1820888e7192e67865834c6cd 1367 SMART SM00487 113 306 9.4E-25 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RR42_RS13030 3dd4cfb1820888e7192e67865834c6cd 1367 SMART SM00382 130 306 0.0049 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS13030 3dd4cfb1820888e7192e67865834c6cd 1367 Gene3D G3DSA:3.40.50.300 115 277 5.7E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13030 3dd4cfb1820888e7192e67865834c6cd 1367 PANTHER PTHR18934:SF109 801 929 2.4E-299 T 23-04-2016 RR42_RS13030 3dd4cfb1820888e7192e67865834c6cd 1367 PANTHER PTHR18934:SF109 113 766 2.4E-299 T 23-04-2016 RR42_RS13030 3dd4cfb1820888e7192e67865834c6cd 1367 Pfam PF00270 DEAD/DEAH box helicase 123 276 1.8E-5 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RR42_RS14880 e1a75adece70f0ee44215b2eb4488189 329 Pfam PF04773 FecR protein 126 218 6.1E-10 T 23-04-2016 IPR006860 FecR protein RR42_RS14880 e1a75adece70f0ee44215b2eb4488189 329 PANTHER PTHR30273:SF2 8 328 4.1E-40 T 23-04-2016 RR42_RS14880 e1a75adece70f0ee44215b2eb4488189 329 PIRSF PIRSF018266 6 328 2.1E-62 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component RR42_RS14880 e1a75adece70f0ee44215b2eb4488189 329 PANTHER PTHR30273 8 328 4.1E-40 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component RR42_RS14880 e1a75adece70f0ee44215b2eb4488189 329 Pfam PF16220 Domain of unknown function (DUF4880) 16 53 1.2E-7 T 23-04-2016 IPR032623 FecR, N-terminal RR42_RS19165 fb2edef38aa1e15504071307af2fe9b8 60 Gene3D G3DSA:3.30.1390.20 4 58 5.9E-30 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RR42_RS19165 fb2edef38aa1e15504071307af2fe9b8 60 PANTHER PTHR15892 5 58 5.0E-24 T 23-04-2016 RR42_RS19165 fb2edef38aa1e15504071307af2fe9b8 60 Pfam PF00327 Ribosomal protein L30p/L7e 7 56 3.9E-19 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RR42_RS19165 fb2edef38aa1e15504071307af2fe9b8 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 3 60 20.365 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 RR42_RS19165 fb2edef38aa1e15504071307af2fe9b8 60 PIRSF PIRSF002211 1 60 1.2E-26 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 RR42_RS19165 fb2edef38aa1e15504071307af2fe9b8 60 SUPERFAMILY SSF55129 4 58 3.4E-20 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RR42_RS19165 fb2edef38aa1e15504071307af2fe9b8 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 6 58 6.8E-25 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 RR42_RS15825 74b7467cd1ff8bce8d0876c4b4e6d67c 638 PANTHER PTHR10366 282 566 1.0E-119 T 23-04-2016 RR42_RS15825 74b7467cd1ff8bce8d0876c4b4e6d67c 638 PANTHER PTHR10366:SF256 282 566 1.0E-119 T 23-04-2016 RR42_RS15825 74b7467cd1ff8bce8d0876c4b4e6d67c 638 Gene3D G3DSA:3.40.50.720 282 468 1.2E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS15825 74b7467cd1ff8bce8d0876c4b4e6d67c 638 SUPERFAMILY SSF51735 275 555 1.19E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS15825 74b7467cd1ff8bce8d0876c4b4e6d67c 638 Gene3D G3DSA:3.40.50.720 143 220 2.8E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS15825 74b7467cd1ff8bce8d0876c4b4e6d67c 638 SUPERFAMILY SSF53335 110 326 1.06E-20 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS15825 74b7467cd1ff8bce8d0876c4b4e6d67c 638 Gene3D G3DSA:3.90.25.10 469 554 3.2E-7 T 23-04-2016 RR42_RS15825 74b7467cd1ff8bce8d0876c4b4e6d67c 638 Pfam PF02719 Polysaccharide biosynthesis protein 283 576 6.2E-126 T 23-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain RR42_RS15825 74b7467cd1ff8bce8d0876c4b4e6d67c 638 Pfam PF13727 CoA-binding domain 65 238 4.1E-17 T 23-04-2016 RR42_RS22370 fccae42dac468535c1af89d3ab2ccbfa 91 SUPERFAMILY SSF53720 2 84 2.36E-22 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RR42_RS22370 fccae42dac468535c1af89d3ab2ccbfa 91 Pfam PF00171 Aldehyde dehydrogenase family 2 85 5.8E-21 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RR42_RS22370 fccae42dac468535c1af89d3ab2ccbfa 91 PANTHER PTHR11699 1 90 6.3E-41 T 23-04-2016 RR42_RS22370 fccae42dac468535c1af89d3ab2ccbfa 91 Gene3D G3DSA:3.40.605.10 2 87 1.3E-25 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RR42_RS22370 fccae42dac468535c1af89d3ab2ccbfa 91 PANTHER PTHR11699:SF188 1 90 6.3E-41 T 23-04-2016 RR42_RS08820 7cec2998070c5fab638c4218e96b2b8c 1246 SMART SM00926 43 105 1.6E-8 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RR42_RS08820 7cec2998070c5fab638c4218e96b2b8c 1246 Gene3D G3DSA:3.40.228.10 224 336 2.4E-85 T 23-04-2016 RR42_RS08820 7cec2998070c5fab638c4218e96b2b8c 1246 Gene3D G3DSA:3.40.228.10 489 610 2.4E-85 T 23-04-2016 RR42_RS08820 7cec2998070c5fab638c4218e96b2b8c 1246 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 2.0E-16 T 23-04-2016 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 RR42_RS08820 7cec2998070c5fab638c4218e96b2b8c 1246 Pfam PF01568 Molydopterin dinucleotide binding domain 1085 1199 3.6E-21 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RR42_RS08820 7cec2998070c5fab638c4218e96b2b8c 1246 Gene3D G3DSA:2.40.40.20 1055 1231 2.2E-39 T 23-04-2016 RR42_RS08820 7cec2998070c5fab638c4218e96b2b8c 1246 PANTHER PTHR11615:SF165 848 873 0.0 T 23-04-2016 RR42_RS08820 7cec2998070c5fab638c4218e96b2b8c 1246 PANTHER PTHR11615:SF165 34 412 0.0 T 23-04-2016 RR42_RS08820 7cec2998070c5fab638c4218e96b2b8c 1246 PANTHER PTHR11615:SF165 992 1226 0.0 T 23-04-2016 RR42_RS08820 7cec2998070c5fab638c4218e96b2b8c 1246 PANTHER PTHR11615:SF165 697 832 0.0 T 23-04-2016 RR42_RS08820 7cec2998070c5fab638c4218e96b2b8c 1246 SUPERFAMILY SSF53706 4 1066 0.0 T 23-04-2016 RR42_RS08820 7cec2998070c5fab638c4218e96b2b8c 1246 Gene3D G3DSA:3.40.50.740 108 223 1.4E-65 T 23-04-2016 RR42_RS08820 7cec2998070c5fab638c4218e96b2b8c 1246 Gene3D G3DSA:3.40.50.740 652 830 1.4E-65 T 23-04-2016 RR42_RS08820 7cec2998070c5fab638c4218e96b2b8c 1246 SUPERFAMILY SSF50692 1078 1235 1.18E-45 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain RR42_RS08820 7cec2998070c5fab638c4218e96b2b8c 1246 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1232 0.0 T 23-04-2016 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 RR42_RS08820 7cec2998070c5fab638c4218e96b2b8c 1246 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1122 1149 - T 23-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RR42_RS08820 7cec2998070c5fab638c4218e96b2b8c 1246 Pfam PF00384 Molybdopterin oxidoreductase 108 829 3.1E-154 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RR42_RS08820 7cec2998070c5fab638c4218e96b2b8c 1246 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 23-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 RR42_RS08820 7cec2998070c5fab638c4218e96b2b8c 1246 Gene3D G3DSA:4.10.1200.10 1 26 2.6E-9 T 23-04-2016 RR42_RS08820 7cec2998070c5fab638c4218e96b2b8c 1246 PANTHER PTHR11615 848 873 0.0 T 23-04-2016 RR42_RS08820 7cec2998070c5fab638c4218e96b2b8c 1246 PANTHER PTHR11615 34 412 0.0 T 23-04-2016 RR42_RS08820 7cec2998070c5fab638c4218e96b2b8c 1246 PANTHER PTHR11615 992 1226 0.0 T 23-04-2016 RR42_RS08820 7cec2998070c5fab638c4218e96b2b8c 1246 PANTHER PTHR11615 697 832 0.0 T 23-04-2016 RR42_RS08820 7cec2998070c5fab638c4218e96b2b8c 1246 Gene3D G3DSA:2.20.25.90 52 98 3.4E-32 T 23-04-2016 RR42_RS06230 e0b8b834033d88b668506c303e1bfea3 207 PANTHER PTHR17490 1 205 9.0E-81 T 23-04-2016 RR42_RS06230 e0b8b834033d88b668506c303e1bfea3 207 SUPERFAMILY SSF55821 1 204 1.98E-61 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RR42_RS06230 e0b8b834033d88b668506c303e1bfea3 207 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 203 4.0E-56 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 RR42_RS06230 e0b8b834033d88b668506c303e1bfea3 207 PANTHER PTHR17490:SF7 1 205 9.0E-81 T 23-04-2016 RR42_RS06230 e0b8b834033d88b668506c303e1bfea3 207 Gene3D G3DSA:3.90.870.10 2 204 8.0E-60 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RR42_RS06230 e0b8b834033d88b668506c303e1bfea3 207 Pfam PF01300 Telomere recombination 23 198 1.1E-41 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 Gene3D G3DSA:3.40.50.20 540 667 1.2E-59 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 678 883 1.4E-34 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 341 1.8E-70 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 SUPERFAMILY SSF56059 128 408 2.47E-106 T 23-04-2016 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 Gene3D G3DSA:3.30.1490.20 692 749 1.9E-25 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 SUPERFAMILY SSF52335 944 1080 2.62E-38 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1072 13.189 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 Gene3D G3DSA:1.10.1030.10 407 539 2.2E-49 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 SMART SM00851 964 1051 2.1E-27 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 Gene3D G3DSA:3.40.50.1380 946 1080 7.6E-40 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 Gene3D G3DSA:3.30.1490.20 143 206 7.5E-24 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 387 405 7.7E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 211 230 7.7E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 7.7E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 175 187 7.7E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 7.7E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 304 333 7.7E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 246 263 7.7E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 171 185 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 714 728 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 PANTHER PTHR11405:SF5 1 1080 0.0 T 23-04-2016 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 PANTHER PTHR11405 1 1080 0.0 T 23-04-2016 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 SUPERFAMILY SSF56059 678 942 4.77E-103 T 23-04-2016 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 Gene3D G3DSA:3.30.470.20 207 406 5.2E-76 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 Gene3D G3DSA:3.30.470.20 750 943 2.5E-79 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 Pfam PF02142 MGS-like domain 966 1051 2.3E-18 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1077 13.354 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 SUPERFAMILY SSF52440 1 127 2.3E-51 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 SUPERFAMILY SSF52440 563 680 1.15E-49 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 SMART SM01096 426 549 1.7E-72 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 Gene3D G3DSA:3.40.50.20 3 108 3.3E-45 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 SUPERFAMILY SSF48108 403 554 3.79E-50 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 847 854 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 304 311 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1061 0.0 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS13510 694f007140be1d8e35831d76acfe90bb 1082 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 429 549 1.3E-38 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RR42_RS14090 be2a02e59a4d4d0231dd1434c77c19d7 410 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 1.3E-60 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RR42_RS14090 be2a02e59a4d4d0231dd1434c77c19d7 410 SMART SM00825 Beta-ketoacyl synthase 6 410 8.2E-17 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RR42_RS14090 be2a02e59a4d4d0231dd1434c77c19d7 410 Gene3D G3DSA:3.40.47.10 3 257 8.6E-83 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS14090 be2a02e59a4d4d0231dd1434c77c19d7 410 Gene3D G3DSA:3.40.47.10 263 409 8.1E-60 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS14090 be2a02e59a4d4d0231dd1434c77c19d7 410 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 408 1.4E-197 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 RR42_RS14090 be2a02e59a4d4d0231dd1434c77c19d7 410 PANTHER PTHR11712 3 410 3.9E-215 T 23-04-2016 RR42_RS14090 be2a02e59a4d4d0231dd1434c77c19d7 410 PIRSF PIRSF000447 1 410 7.9E-187 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 RR42_RS14090 be2a02e59a4d4d0231dd1434c77c19d7 410 SUPERFAMILY SSF53901 4 252 9.95E-80 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS14090 be2a02e59a4d4d0231dd1434c77c19d7 410 SUPERFAMILY SSF53901 215 409 3.03E-69 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS14090 be2a02e59a4d4d0231dd1434c77c19d7 410 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site RR42_RS14090 be2a02e59a4d4d0231dd1434c77c19d7 410 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 367 5.6E-36 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RR42_RS10280 68ccacf817fdcf599e3b9f2c0e89053c 380 SMART SM00387 279 373 6.8E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS10280 68ccacf817fdcf599e3b9f2c0e89053c 380 Gene3D G3DSA:3.30.565.10 263 371 5.9E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS10280 68ccacf817fdcf599e3b9f2c0e89053c 380 SUPERFAMILY SSF55785 23 129 2.42E-14 T 23-04-2016 IPR000014 PAS domain RR42_RS10280 68ccacf817fdcf599e3b9f2c0e89053c 380 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 135 5.7E-14 T 23-04-2016 IPR000014 PAS domain RR42_RS10280 68ccacf817fdcf599e3b9f2c0e89053c 380 Pfam PF07730 Histidine kinase 157 241 1.5E-10 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RR42_RS10280 68ccacf817fdcf599e3b9f2c0e89053c 380 Pfam PF08448 PAS fold 27 131 3.2E-13 T 23-04-2016 IPR013656 PAS fold-4 RR42_RS10280 68ccacf817fdcf599e3b9f2c0e89053c 380 PANTHER PTHR24421:SF1 129 379 3.3E-37 T 23-04-2016 RR42_RS10280 68ccacf817fdcf599e3b9f2c0e89053c 380 SUPERFAMILY SSF55874 242 370 1.92E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS10280 68ccacf817fdcf599e3b9f2c0e89053c 380 Gene3D G3DSA:3.30.450.20 20 129 2.9E-14 T 23-04-2016 RR42_RS10280 68ccacf817fdcf599e3b9f2c0e89053c 380 SMART SM00091 18 83 4.2E-5 T 23-04-2016 IPR000014 PAS domain RR42_RS10280 68ccacf817fdcf599e3b9f2c0e89053c 380 PANTHER PTHR24421 129 379 3.3E-37 T 23-04-2016 RR42_RS10280 68ccacf817fdcf599e3b9f2c0e89053c 380 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 280 329 4.9E-6 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS01805 b7524f478b67e32b4260f1b138d76de6 355 Pfam PF02769 AIR synthase related protein, C-terminal domain 172 354 1.5E-27 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RR42_RS01805 b7524f478b67e32b4260f1b138d76de6 355 PIRSF PIRSF036407 1 355 6.1E-109 T 23-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 RR42_RS01805 b7524f478b67e32b4260f1b138d76de6 355 Pfam PF00586 AIR synthase related protein, N-terminal domain 49 159 4.6E-20 T 23-04-2016 IPR016188 PurM-like, N-terminal domain RR42_RS01805 b7524f478b67e32b4260f1b138d76de6 355 Gene3D G3DSA:3.30.1330.10 38 164 3.9E-31 T 23-04-2016 IPR016188 PurM-like, N-terminal domain RR42_RS01805 b7524f478b67e32b4260f1b138d76de6 355 SUPERFAMILY SSF56042 166 350 1.29E-48 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RR42_RS01805 b7524f478b67e32b4260f1b138d76de6 355 PANTHER PTHR10256 1 351 2.2E-141 T 23-04-2016 RR42_RS01805 b7524f478b67e32b4260f1b138d76de6 355 SUPERFAMILY SSF55326 6 162 1.7E-38 T 23-04-2016 RR42_RS01805 b7524f478b67e32b4260f1b138d76de6 355 Gene3D G3DSA:3.90.650.10 175 352 2.1E-15 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RR42_RS01805 b7524f478b67e32b4260f1b138d76de6 355 Hamap MF_00625 Selenide, water dikinase [selD]. 4 355 43.871 T 23-04-2016 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 RR42_RS01805 b7524f478b67e32b4260f1b138d76de6 355 TIGRFAM TIGR00476 selD: selenide, water dikinase 6 322 4.6E-131 T 23-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 RR42_RS15025 5ab824a3071ea989e605cdc40f36c161 306 SUPERFAMILY SSF103481 180 280 9.81E-13 T 23-04-2016 RR42_RS15025 5ab824a3071ea989e605cdc40f36c161 306 PANTHER PTHR22911:SF6 4 305 2.6E-49 T 23-04-2016 RR42_RS15025 5ab824a3071ea989e605cdc40f36c161 306 PANTHER PTHR22911 4 305 2.6E-49 T 23-04-2016 RR42_RS15025 5ab824a3071ea989e605cdc40f36c161 306 SUPERFAMILY SSF103481 35 136 1.18E-5 T 23-04-2016 RR42_RS15025 5ab824a3071ea989e605cdc40f36c161 306 Pfam PF00892 EamA-like transporter family 146 272 4.0E-7 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS29200 9553d7bcbb9c10296f4148032e4a1061 200 SUPERFAMILY SSF53613 9 200 1.42E-45 T 23-04-2016 IPR029056 Ribokinase-like RR42_RS29200 9553d7bcbb9c10296f4148032e4a1061 200 PANTHER PTHR12592 8 200 8.3E-44 T 23-04-2016 RR42_RS29200 9553d7bcbb9c10296f4148032e4a1061 200 Pfam PF01256 Carbohydrate kinase 15 200 1.9E-41 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 RR42_RS29200 9553d7bcbb9c10296f4148032e4a1061 200 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 8 200 5.8E-39 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 RR42_RS29200 9553d7bcbb9c10296f4148032e4a1061 200 Gene3D G3DSA:3.40.1190.20 8 200 2.9E-57 T 23-04-2016 IPR029056 Ribokinase-like RR42_RS29200 9553d7bcbb9c10296f4148032e4a1061 200 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 166 176 - T 23-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site RR42_RS29200 9553d7bcbb9c10296f4148032e4a1061 200 PANTHER PTHR12592:SF0 8 200 8.3E-44 T 23-04-2016 RR42_RS06535 764becf711140492ef280bfa0462acd6 342 SUPERFAMILY SSF53850 76 127 4.65E-6 T 23-04-2016 RR42_RS06535 764becf711140492ef280bfa0462acd6 342 SUPERFAMILY SSF53850 159 256 4.65E-6 T 23-04-2016 RR42_RS06535 764becf711140492ef280bfa0462acd6 342 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 44 279 4.0E-60 T 23-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 RR42_RS06535 764becf711140492ef280bfa0462acd6 342 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 38 325 1.1E-74 T 23-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 RR42_RS06535 764becf711140492ef280bfa0462acd6 342 PIRSF PIRSF006470 1 341 2.2E-83 T 23-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 RR42_RS06535 764becf711140492ef280bfa0462acd6 342 PANTHER PTHR33376 1 326 3.9E-68 T 23-04-2016 RR42_RS16045 a667b0649667e1a289edd003ddc90490 62 Pfam PF11943 Protein of unknown function (DUF3460) 4 60 1.0E-27 T 23-04-2016 IPR021853 Protein of unknown function DUF3460 RR42_RS07705 921c92a3aa4d82e86cbdc272119af1f7 339 Gene3D G3DSA:3.40.50.720 170 285 1.3E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS07705 921c92a3aa4d82e86cbdc272119af1f7 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 132 4.1E-25 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RR42_RS07705 921c92a3aa4d82e86cbdc272119af1f7 339 SUPERFAMILY SSF51735 144 312 1.45E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS07705 921c92a3aa4d82e86cbdc272119af1f7 339 SMART SM00829 10 337 2.7E-12 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RR42_RS07705 921c92a3aa4d82e86cbdc272119af1f7 339 Pfam PF00107 Zinc-binding dehydrogenase 176 302 1.8E-26 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RR42_RS07705 921c92a3aa4d82e86cbdc272119af1f7 339 Gene3D G3DSA:3.90.180.10 1 169 4.3E-43 T 23-04-2016 IPR011032 GroES-like RR42_RS07705 921c92a3aa4d82e86cbdc272119af1f7 339 SUPERFAMILY SSF50129 1 172 1.57E-44 T 23-04-2016 IPR011032 GroES-like RR42_RS07705 921c92a3aa4d82e86cbdc272119af1f7 339 PANTHER PTHR11695 15 339 1.0E-97 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RR42_RS13145 b1224e1e9ec51e0e88adee1c6fbb334e 337 SUPERFAMILY SSF47413 30 99 2.42E-5 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS13145 b1224e1e9ec51e0e88adee1c6fbb334e 337 PANTHER PTHR34475 20 337 2.0E-32 T 23-04-2016 RR42_RS13145 b1224e1e9ec51e0e88adee1c6fbb334e 337 Pfam PF13464 Domain of unknown function (DUF4115) 262 336 1.0E-19 T 23-04-2016 IPR025194 Domain of unknown function DUF4115 RR42_RS13145 b1224e1e9ec51e0e88adee1c6fbb334e 337 Pfam PF13413 Helix-turn-helix domain 36 96 7.9E-18 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS13145 b1224e1e9ec51e0e88adee1c6fbb334e 337 Gene3D G3DSA:1.10.260.40 32 112 2.0E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS13145 b1224e1e9ec51e0e88adee1c6fbb334e 337 PANTHER PTHR34475:SF1 20 337 2.0E-32 T 23-04-2016 RR42_RS14980 01b33c02332dfcb0e0943f9078427dea 149 Gene3D G3DSA:1.10.10.410 91 147 1.0E-22 T 23-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RR42_RS14980 01b33c02332dfcb0e0943f9078427dea 149 PANTHER PTHR28055 1 149 1.8E-53 T 23-04-2016 RR42_RS14980 01b33c02332dfcb0e0943f9078427dea 149 Gene3D G3DSA:1.10.1510.10 1 90 2.7E-34 T 23-04-2016 RR42_RS14980 01b33c02332dfcb0e0943f9078427dea 149 PANTHER PTHR28055:SF1 1 149 1.8E-53 T 23-04-2016 RR42_RS14980 01b33c02332dfcb0e0943f9078427dea 149 Pfam PF09424 Yqey-like protein 4 146 2.8E-55 T 23-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial RR42_RS14980 01b33c02332dfcb0e0943f9078427dea 149 SUPERFAMILY SSF89095 1 146 4.6E-43 T 23-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 RR42_RS04775 f322558761d1feefe2ab6b4f9dc931e9 324 SMART SM00829 11 322 5.7E-52 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RR42_RS04775 f322558761d1feefe2ab6b4f9dc931e9 324 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 140 161 - T 23-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 RR42_RS04775 f322558761d1feefe2ab6b4f9dc931e9 324 SUPERFAMILY SSF50129 2 149 1.12E-38 T 23-04-2016 IPR011032 GroES-like RR42_RS04775 f322558761d1feefe2ab6b4f9dc931e9 324 Gene3D G3DSA:3.90.180.10 3 146 4.3E-46 T 23-04-2016 IPR011032 GroES-like RR42_RS04775 f322558761d1feefe2ab6b4f9dc931e9 324 PANTHER PTHR11695 16 324 1.1E-132 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RR42_RS04775 f322558761d1feefe2ab6b4f9dc931e9 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 86 2.7E-9 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RR42_RS04775 f322558761d1feefe2ab6b4f9dc931e9 324 SUPERFAMILY SSF51735 112 273 3.14E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS04775 f322558761d1feefe2ab6b4f9dc931e9 324 PANTHER PTHR11695:SF578 16 324 1.1E-132 T 23-04-2016 RR42_RS04775 f322558761d1feefe2ab6b4f9dc931e9 324 Pfam PF00107 Zinc-binding dehydrogenase 151 255 3.0E-30 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RR42_RS04775 f322558761d1feefe2ab6b4f9dc931e9 324 Gene3D G3DSA:3.40.50.720 147 255 4.4E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS11775 bdf3961865202864f46a7c16f16dfc3a 150 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 3 127 1.0E-62 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 RR42_RS11775 bdf3961865202864f46a7c16f16dfc3a 150 TIGRFAM TIGR00086 smpB: SsrA-binding protein 3 145 7.9E-53 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 RR42_RS11775 bdf3961865202864f46a7c16f16dfc3a 150 ProSitePatterns PS01317 SsrA-binding protein. 21 33 - T 23-04-2016 IPR020081 SsrA-binding protein, conserved site RR42_RS11775 bdf3961865202864f46a7c16f16dfc3a 150 Pfam PF01668 SmpB protein 2 65 2.4E-29 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 RR42_RS11775 bdf3961865202864f46a7c16f16dfc3a 150 SUPERFAMILY SSF74982 2 127 5.23E-49 T 23-04-2016 IPR023620 Small protein B RR42_RS11775 bdf3961865202864f46a7c16f16dfc3a 150 PANTHER PTHR30308:SF2 2 150 1.1E-71 T 23-04-2016 RR42_RS11775 bdf3961865202864f46a7c16f16dfc3a 150 PANTHER PTHR30308 2 150 1.1E-71 T 23-04-2016 RR42_RS11775 bdf3961865202864f46a7c16f16dfc3a 150 Gene3D G3DSA:2.40.280.10 2 122 1.3E-48 T 23-04-2016 IPR023620 Small protein B RR42_RS11775 bdf3961865202864f46a7c16f16dfc3a 150 Hamap MF_00023 SsrA-binding protein [smpB]. 1 150 72.585 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 RR42_RS12110 c492fdef9aba006000e1b747b94e1097 490 Gene3D G3DSA:3.50.50.60 39 269 1.0E-23 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS12110 c492fdef9aba006000e1b747b94e1097 490 PANTHER PTHR23023:SF119 121 375 2.4E-51 T 23-04-2016 RR42_RS12110 c492fdef9aba006000e1b747b94e1097 490 PANTHER PTHR23023:SF119 37 104 2.4E-51 T 23-04-2016 RR42_RS12110 c492fdef9aba006000e1b747b94e1097 490 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 125 292 4.6E-11 T 23-04-2016 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase RR42_RS12110 c492fdef9aba006000e1b747b94e1097 490 Pfam PF13450 NAD(P)-binding Rossmann-like domain 43 73 1.4E-4 T 23-04-2016 RR42_RS12110 c492fdef9aba006000e1b747b94e1097 490 PANTHER PTHR23023 121 375 2.4E-51 T 23-04-2016 RR42_RS12110 c492fdef9aba006000e1b747b94e1097 490 PANTHER PTHR23023 37 104 2.4E-51 T 23-04-2016 RR42_RS12110 c492fdef9aba006000e1b747b94e1097 490 SUPERFAMILY SSF51905 40 276 4.05E-23 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS12110 c492fdef9aba006000e1b747b94e1097 490 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 182 190 4.3E-6 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RR42_RS12110 c492fdef9aba006000e1b747b94e1097 490 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 64 86 4.3E-6 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RR42_RS12110 c492fdef9aba006000e1b747b94e1097 490 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 223 247 4.3E-6 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RR42_RS16930 ec0636d96ef6428786a2f8dd429bf02a 259 PANTHER PTHR24220 5 229 3.6E-95 T 23-04-2016 RR42_RS16930 ec0636d96ef6428786a2f8dd429bf02a 259 Pfam PF00005 ABC transporter 25 163 1.8E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS16930 ec0636d96ef6428786a2f8dd429bf02a 259 Gene3D G3DSA:3.40.50.300 3 223 1.0E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS16930 ec0636d96ef6428786a2f8dd429bf02a 259 PANTHER PTHR24220:SF10 5 229 3.6E-95 T 23-04-2016 RR42_RS16930 ec0636d96ef6428786a2f8dd429bf02a 259 SMART SM00382 33 212 1.0E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS16930 ec0636d96ef6428786a2f8dd429bf02a 259 SUPERFAMILY SSF52540 5 233 5.32E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17380 936b4ad0fb9334a9709761e2879d4d38 481 Gene3D G3DSA:2.40.180.10 3 359 6.1E-182 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RR42_RS17380 936b4ad0fb9334a9709761e2879d4d38 481 Pfam PF00199 Catalase 9 389 1.6E-194 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RR42_RS17380 936b4ad0fb9334a9709761e2879d4d38 481 Pfam PF06628 Catalase-related immune-responsive 419 478 5.6E-21 T 23-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RR42_RS17380 936b4ad0fb9334a9709761e2879d4d38 481 PIRSF PIRSF038928 1 481 3.4E-229 T 23-04-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RR42_RS17380 936b4ad0fb9334a9709761e2879d4d38 481 PANTHER PTHR11465 1 481 9.1E-302 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RR42_RS17380 936b4ad0fb9334a9709761e2879d4d38 481 SUPERFAMILY SSF56634 2 480 1.96E-215 T 23-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RR42_RS17380 936b4ad0fb9334a9709761e2879d4d38 481 ProSitePatterns PS00438 Catalase proximal active site signature. 45 61 - T 23-04-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RR42_RS17380 936b4ad0fb9334a9709761e2879d4d38 481 SMART SM01060 9 394 1.3E-291 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RR42_RS17380 936b4ad0fb9334a9709761e2879d4d38 481 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 335 343 - T 23-04-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RR42_RS17380 936b4ad0fb9334a9709761e2879d4d38 481 PRINTS PR00067 Catalase signature 85 103 1.2E-74 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RR42_RS17380 936b4ad0fb9334a9709761e2879d4d38 481 PRINTS PR00067 Catalase signature 22 45 1.2E-74 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RR42_RS17380 936b4ad0fb9334a9709761e2879d4d38 481 PRINTS PR00067 Catalase signature 125 143 1.2E-74 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RR42_RS17380 936b4ad0fb9334a9709761e2879d4d38 481 PRINTS PR00067 Catalase signature 290 317 1.2E-74 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RR42_RS17380 936b4ad0fb9334a9709761e2879d4d38 481 PRINTS PR00067 Catalase signature 322 348 1.2E-74 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RR42_RS17380 936b4ad0fb9334a9709761e2879d4d38 481 PRINTS PR00067 Catalase signature 106 123 1.2E-74 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RR42_RS06600 0a26e098388289a57912136aeb741428 635 SUPERFAMILY SSF55681 242 525 1.07E-101 T 23-04-2016 RR42_RS06600 0a26e098388289a57912136aeb741428 635 SUPERFAMILY SSF81271 2 61 7.19E-16 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RR42_RS06600 0a26e098388289a57912136aeb741428 635 Gene3D G3DSA:3.30.980.10 66 129 4.2E-42 T 23-04-2016 RR42_RS06600 0a26e098388289a57912136aeb741428 635 Gene3D G3DSA:3.30.980.10 187 223 4.2E-42 T 23-04-2016 RR42_RS06600 0a26e098388289a57912136aeb741428 635 SUPERFAMILY SSF55186 64 240 8.5E-68 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 RR42_RS06600 0a26e098388289a57912136aeb741428 635 SUPERFAMILY SSF52954 529 631 2.11E-29 T 23-04-2016 IPR004154 Anticodon-binding RR42_RS06600 0a26e098388289a57912136aeb741428 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 1.8E-53 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RR42_RS06600 0a26e098388289a57912136aeb741428 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 1.8E-53 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RR42_RS06600 0a26e098388289a57912136aeb741428 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 1.8E-53 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RR42_RS06600 0a26e098388289a57912136aeb741428 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 1.8E-53 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RR42_RS06600 0a26e098388289a57912136aeb741428 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 1.8E-53 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RR42_RS06600 0a26e098388289a57912136aeb741428 635 SMART SM00863 169 218 5.9E-24 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RR42_RS06600 0a26e098388289a57912136aeb741428 635 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 171 218 7.0E-15 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RR42_RS06600 0a26e098388289a57912136aeb741428 635 Gene3D G3DSA:3.40.50.800 530 633 2.2E-32 T 23-04-2016 IPR004154 Anticodon-binding RR42_RS06600 0a26e098388289a57912136aeb741428 635 Gene3D G3DSA:3.30.54.20 130 186 1.8E-24 T 23-04-2016 RR42_RS06600 0a26e098388289a57912136aeb741428 635 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 34.405 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RR42_RS06600 0a26e098388289a57912136aeb741428 635 Pfam PF03129 Anticodon binding domain 540 629 2.5E-18 T 23-04-2016 IPR004154 Anticodon-binding RR42_RS06600 0a26e098388289a57912136aeb741428 635 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 320 528 2.1E-42 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS06600 0a26e098388289a57912136aeb741428 635 Pfam PF02824 TGS domain 2 61 2.7E-10 T 23-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 RR42_RS06600 0a26e098388289a57912136aeb741428 635 Gene3D G3DSA:3.30.930.10 241 529 1.4E-122 T 23-04-2016 RR42_RS06600 0a26e098388289a57912136aeb741428 635 PANTHER PTHR11451 1 635 0.0 T 23-04-2016 RR42_RS06600 0a26e098388289a57912136aeb741428 635 Gene3D G3DSA:3.10.20.30 1 64 1.2E-22 T 23-04-2016 IPR012675 Beta-grasp domain RR42_RS06600 0a26e098388289a57912136aeb741428 635 PANTHER PTHR11451:SF31 1 635 0.0 T 23-04-2016 RR42_RS06600 0a26e098388289a57912136aeb741428 635 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 630 8.3E-222 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RR42_RS00145 455f406fa0571e16eb7500dd160f37d7 268 Pfam PF13145 PPIC-type PPIASE domain 107 238 4.7E-17 T 23-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 RR42_RS00145 455f406fa0571e16eb7500dd160f37d7 268 SUPERFAMILY SSF109998 23 155 1.37E-12 T 23-04-2016 IPR027304 Trigger factor/SurA domain RR42_RS00145 455f406fa0571e16eb7500dd160f37d7 268 SUPERFAMILY SSF54534 127 226 1.7E-13 T 23-04-2016 RR42_RS00145 455f406fa0571e16eb7500dd160f37d7 268 Gene3D G3DSA:3.10.50.40 135 248 3.1E-18 T 23-04-2016 RR42_RS01685 27e765b4620e7b7ab1699b9bcab2d45f 214 Gene3D G3DSA:3.40.50.1820 9 214 7.5E-46 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS01685 27e765b4620e7b7ab1699b9bcab2d45f 214 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 21 129 6.7E-8 T 23-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 RR42_RS01685 27e765b4620e7b7ab1699b9bcab2d45f 214 PANTHER PTHR12277:SF79 10 209 5.4E-32 T 23-04-2016 RR42_RS01685 27e765b4620e7b7ab1699b9bcab2d45f 214 PANTHER PTHR12277 10 209 5.4E-32 T 23-04-2016 RR42_RS01685 27e765b4620e7b7ab1699b9bcab2d45f 214 SUPERFAMILY SSF53474 3 213 7.62E-39 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS26985 393148707a78aaabf460a711ec46844e 120 PANTHER PTHR11748:SF76 1 120 2.6E-20 T 23-04-2016 RR42_RS26985 393148707a78aaabf460a711ec46844e 120 Pfam PF02913 FAD linked oxidases, C-terminal domain 7 120 2.7E-12 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RR42_RS26985 393148707a78aaabf460a711ec46844e 120 PANTHER PTHR11748 1 120 2.6E-20 T 23-04-2016 RR42_RS26985 393148707a78aaabf460a711ec46844e 120 SUPERFAMILY SSF55103 2 120 3.05E-16 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RR42_RS02875 e464760ef150f2a286eff9f4c368d858 353 Gene3D G3DSA:3.90.1200.10 122 351 1.2E-55 T 23-04-2016 RR42_RS02875 e464760ef150f2a286eff9f4c368d858 353 Pfam PF01636 Phosphotransferase enzyme family 53 288 6.6E-36 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase RR42_RS02875 e464760ef150f2a286eff9f4c368d858 353 SUPERFAMILY SSF56112 24 352 5.69E-81 T 23-04-2016 IPR011009 Protein kinase-like domain RR42_RS02875 e464760ef150f2a286eff9f4c368d858 353 Hamap MF_01497 Stress response kinase A [srkA]. 21 346 46.495 T 23-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 RR42_RS02875 e464760ef150f2a286eff9f4c368d858 353 PANTHER PTHR39573:SF1 19 350 2.9E-139 T 23-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 RR42_RS02875 e464760ef150f2a286eff9f4c368d858 353 PANTHER PTHR39573 19 350 2.9E-139 T 23-04-2016 RR42_RS14110 ed3038c5e3754037e653fccd730a6e02 326 SUPERFAMILY SSF53901 4 326 1.48E-72 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS14110 ed3038c5e3754037e653fccd730a6e02 326 Gene3D G3DSA:3.40.47.10 169 325 2.7E-53 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS14110 ed3038c5e3754037e653fccd730a6e02 326 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 238 326 1.6E-34 T 23-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RR42_RS14110 ed3038c5e3754037e653fccd730a6e02 326 PANTHER PTHR18919:SF109 33 326 5.4E-131 T 23-04-2016 RR42_RS14110 ed3038c5e3754037e653fccd730a6e02 326 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 114 191 1.9E-34 T 23-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RR42_RS14110 ed3038c5e3754037e653fccd730a6e02 326 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 4 326 2.7E-123 T 23-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RR42_RS14110 ed3038c5e3754037e653fccd730a6e02 326 Gene3D G3DSA:3.40.47.10 2 168 2.7E-68 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS14110 ed3038c5e3754037e653fccd730a6e02 326 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 3 326 70.161 T 23-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RR42_RS14110 ed3038c5e3754037e653fccd730a6e02 326 PANTHER PTHR18919 33 326 5.4E-131 T 23-04-2016 RR42_RS06065 1e6c9e4391cd24252513612d357a3f1f 260 Pfam PF05433 Glycine zipper 2TM domain 173 213 2.1E-11 T 23-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 RR42_RS06065 1e6c9e4391cd24252513612d357a3f1f 260 PANTHER PTHR35603 156 246 1.5E-14 T 23-04-2016 RR42_RS19860 09322491076e0485e0d87d48b692065d 308 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 7 302 9.6E-124 T 23-04-2016 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 RR42_RS19860 09322491076e0485e0d87d48b692065d 308 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 171 4.1E-47 T 23-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 RR42_RS19860 09322491076e0485e0d87d48b692065d 308 Gene3D G3DSA:3.40.50.720 3 172 4.0E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS19860 09322491076e0485e0d87d48b692065d 308 SUPERFAMILY SSF51735 5 171 7.37E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS19860 09322491076e0485e0d87d48b692065d 308 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 9 22 - T 23-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 RR42_RS19860 09322491076e0485e0d87d48b692065d 308 PIRSF PIRSF000103 1 302 5.2E-72 T 23-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 RR42_RS19860 09322491076e0485e0d87d48b692065d 308 SUPERFAMILY SSF48179 173 301 9.64E-37 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RR42_RS19860 09322491076e0485e0d87d48b692065d 308 Gene3D G3DSA:1.10.1040.10 174 301 1.3E-41 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RR42_RS19860 09322491076e0485e0d87d48b692065d 308 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 174 293 1.3E-37 T 23-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 RR42_RS19860 09322491076e0485e0d87d48b692065d 308 PANTHER PTHR22981:SF70 1 304 5.1E-127 T 23-04-2016 RR42_RS19860 09322491076e0485e0d87d48b692065d 308 PANTHER PTHR22981 1 304 5.1E-127 T 23-04-2016 RR42_RS16980 4dfef042cfd6e248db762a95cf16b638 401 PANTHER PTHR30483 29 390 2.4E-89 T 23-04-2016 RR42_RS16980 4dfef042cfd6e248db762a95cf16b638 401 SUPERFAMILY SSF53822 51 396 2.36E-98 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RR42_RS16980 4dfef042cfd6e248db762a95cf16b638 401 Gene3D G3DSA:3.40.50.2300 51 251 1.0E-68 T 23-04-2016 RR42_RS16980 4dfef042cfd6e248db762a95cf16b638 401 Pfam PF13458 Periplasmic binding protein 51 391 1.1E-62 T 23-04-2016 IPR028081 Leucine-binding protein domain RR42_RS16980 4dfef042cfd6e248db762a95cf16b638 401 PANTHER PTHR30483:SF20 29 390 2.4E-89 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RR42_RS01480 4c1f211c7e6a8dd7755595eeba2a84a4 431 SUPERFAMILY SSF55785 126 253 5.58E-19 T 23-04-2016 IPR000014 PAS domain RR42_RS01480 4c1f211c7e6a8dd7755595eeba2a84a4 431 Gene3D G3DSA:3.30.450.20 126 256 1.1E-19 T 23-04-2016 RR42_RS01480 4c1f211c7e6a8dd7755595eeba2a84a4 431 PANTHER PTHR10799:SF710 222 425 4.0E-29 T 23-04-2016 RR42_RS01480 4c1f211c7e6a8dd7755595eeba2a84a4 431 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 269 429 1.7E-47 T 23-04-2016 IPR000160 GGDEF domain RR42_RS01480 4c1f211c7e6a8dd7755595eeba2a84a4 431 SUPERFAMILY SSF55073 274 428 1.49E-49 T 23-04-2016 IPR029787 Nucleotide cyclase RR42_RS01480 4c1f211c7e6a8dd7755595eeba2a84a4 431 Pfam PF00990 Diguanylate cyclase, GGDEF domain 271 425 3.4E-42 T 23-04-2016 IPR000160 GGDEF domain RR42_RS01480 4c1f211c7e6a8dd7755595eeba2a84a4 431 SMART SM00267 258 430 2.3E-52 T 23-04-2016 IPR000160 GGDEF domain RR42_RS01480 4c1f211c7e6a8dd7755595eeba2a84a4 431 Pfam PF13426 PAS domain 157 257 5.8E-13 T 23-04-2016 IPR000014 PAS domain RR42_RS01480 4c1f211c7e6a8dd7755595eeba2a84a4 431 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 139 259 6.9E-18 T 23-04-2016 IPR000014 PAS domain RR42_RS01480 4c1f211c7e6a8dd7755595eeba2a84a4 431 PANTHER PTHR10799 222 425 4.0E-29 T 23-04-2016 RR42_RS01480 4c1f211c7e6a8dd7755595eeba2a84a4 431 Gene3D G3DSA:3.30.70.270 271 429 3.6E-54 T 23-04-2016 RR42_RS01480 4c1f211c7e6a8dd7755595eeba2a84a4 431 SMART SM00091 142 209 0.0014 T 23-04-2016 IPR000014 PAS domain RR42_RS01480 4c1f211c7e6a8dd7755595eeba2a84a4 431 SMART SM00086 216 258 0.0031 T 23-04-2016 IPR001610 PAC motif RR42_RS04885 b67622efbcf703d8071a0268f9fffd31 205 SUPERFAMILY SSF52972 1 195 9.68E-68 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RR42_RS04885 b67622efbcf703d8071a0268f9fffd31 205 PANTHER PTHR11067 1 203 5.9E-71 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RR42_RS04885 b67622efbcf703d8071a0268f9fffd31 205 PANTHER PTHR11067:SF9 1 203 5.9E-71 T 23-04-2016 RR42_RS04885 b67622efbcf703d8071a0268f9fffd31 205 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 195 3.1E-52 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RR42_RS04885 b67622efbcf703d8071a0268f9fffd31 205 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 197 47.074 T 23-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RR42_RS04885 b67622efbcf703d8071a0268f9fffd31 205 Pfam PF01725 Ham1 family 4 193 1.7E-51 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RR42_RS04885 b67622efbcf703d8071a0268f9fffd31 205 Gene3D G3DSA:3.90.950.10 1 196 3.3E-72 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RR42_RS02815 3976dd4db540a7dc475fdaef3f6fc163 192 PANTHER PTHR23133 7 180 1.8E-74 T 23-04-2016 RR42_RS02815 3976dd4db540a7dc475fdaef3f6fc163 192 SUPERFAMILY SSF56784 4 181 1.27E-47 T 23-04-2016 IPR023214 HAD-like domain RR42_RS02815 3976dd4db540a7dc475fdaef3f6fc163 192 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 8 147 1.1E-46 T 23-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 RR42_RS02815 3976dd4db540a7dc475fdaef3f6fc163 192 PIRSF PIRSF004682 1 180 1.2E-53 T 23-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 RR42_RS02815 3976dd4db540a7dc475fdaef3f6fc163 192 PANTHER PTHR23133:SF7 7 180 1.8E-74 T 23-04-2016 RR42_RS02815 3976dd4db540a7dc475fdaef3f6fc163 192 Gene3D G3DSA:3.40.50.1000 3 180 3.0E-57 T 23-04-2016 IPR023214 HAD-like domain RR42_RS02815 3976dd4db540a7dc475fdaef3f6fc163 192 Pfam PF13242 HAD-hyrolase-like 104 174 1.5E-10 T 23-04-2016 RR42_RS02815 3976dd4db540a7dc475fdaef3f6fc163 192 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 149 3.2E-36 T 23-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA RR42_RS16615 154d847c9d166fc88c06e2bb75cc34cb 331 PANTHER PTHR11820 10 311 5.3E-64 T 23-04-2016 RR42_RS16615 154d847c9d166fc88c06e2bb75cc34cb 331 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 86 320 5.3E-28 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RR42_RS16615 154d847c9d166fc88c06e2bb75cc34cb 331 PANTHER PTHR11820:SF85 10 311 5.3E-64 T 23-04-2016 RR42_RS16615 154d847c9d166fc88c06e2bb75cc34cb 331 Gene3D G3DSA:3.90.850.10 66 308 1.7E-32 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RR42_RS16615 154d847c9d166fc88c06e2bb75cc34cb 331 SUPERFAMILY SSF56529 100 322 4.45E-41 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RR42_RS12155 70ea4ca0b7df0d2034bd0d56679610c5 236 SUPERFAMILY SSF49354 13 136 1.39E-35 T 23-04-2016 IPR008962 PapD-like RR42_RS12155 70ea4ca0b7df0d2034bd0d56679610c5 236 SUPERFAMILY SSF49584 130 228 1.31E-10 T 23-04-2016 IPR016148 Pili assembly chaperone, C-terminal RR42_RS12155 70ea4ca0b7df0d2034bd0d56679610c5 236 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 17 136 7.4E-35 T 23-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 RR42_RS12155 70ea4ca0b7df0d2034bd0d56679610c5 236 PANTHER PTHR30251:SF2 1 236 2.1E-75 T 23-04-2016 RR42_RS12155 70ea4ca0b7df0d2034bd0d56679610c5 236 Gene3D G3DSA:2.60.40.360 17 136 5.9E-36 T 23-04-2016 IPR008962 PapD-like RR42_RS12155 70ea4ca0b7df0d2034bd0d56679610c5 236 PANTHER PTHR30251 1 236 2.1E-75 T 23-04-2016 RR42_RS12155 70ea4ca0b7df0d2034bd0d56679610c5 236 Gene3D G3DSA:2.60.40.1070 139 227 9.0E-13 T 23-04-2016 IPR016148 Pili assembly chaperone, C-terminal RR42_RS12155 70ea4ca0b7df0d2034bd0d56679610c5 236 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 165 225 3.6E-10 T 23-04-2016 IPR016148 Pili assembly chaperone, C-terminal RR42_RS12155 70ea4ca0b7df0d2034bd0d56679610c5 236 PRINTS PR00969 Pili chaperone signature 66 87 8.1E-29 T 23-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RR42_RS12155 70ea4ca0b7df0d2034bd0d56679610c5 236 PRINTS PR00969 Pili chaperone signature 94 111 8.1E-29 T 23-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RR42_RS12155 70ea4ca0b7df0d2034bd0d56679610c5 236 PRINTS PR00969 Pili chaperone signature 159 174 8.1E-29 T 23-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RR42_RS12155 70ea4ca0b7df0d2034bd0d56679610c5 236 PRINTS PR00969 Pili chaperone signature 17 26 8.1E-29 T 23-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RR42_RS12155 70ea4ca0b7df0d2034bd0d56679610c5 236 PRINTS PR00969 Pili chaperone signature 118 133 8.1E-29 T 23-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RR42_RS05040 129a5fd3d6c026878fb630d9ba013e66 674 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 345 364 1.2E-69 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RR42_RS05040 129a5fd3d6c026878fb630d9ba013e66 674 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 185 203 1.2E-69 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RR42_RS05040 129a5fd3d6c026878fb630d9ba013e66 674 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 522 537 1.2E-69 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RR42_RS05040 129a5fd3d6c026878fb630d9ba013e66 674 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 463 481 1.2E-69 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RR42_RS05040 129a5fd3d6c026878fb630d9ba013e66 674 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 485 503 1.2E-69 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RR42_RS05040 129a5fd3d6c026878fb630d9ba013e66 674 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 203 222 1.2E-69 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RR42_RS05040 129a5fd3d6c026878fb630d9ba013e66 674 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 552 569 1.2E-69 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RR42_RS05040 129a5fd3d6c026878fb630d9ba013e66 674 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 108 133 1.2E-69 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RR42_RS05040 129a5fd3d6c026878fb630d9ba013e66 674 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 315 331 1.2E-69 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RR42_RS05040 129a5fd3d6c026878fb630d9ba013e66 674 Pfam PF01019 Gamma-glutamyltranspeptidase 101 665 5.3E-137 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RR42_RS05040 129a5fd3d6c026878fb630d9ba013e66 674 SUPERFAMILY SSF56235 78 669 1.42E-137 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RR42_RS05040 129a5fd3d6c026878fb630d9ba013e66 674 PANTHER PTHR11686:SF27 59 674 1.9E-206 T 23-04-2016 RR42_RS05040 129a5fd3d6c026878fb630d9ba013e66 674 PANTHER PTHR11686 59 674 1.9E-206 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RR42_RS20435 85f1b168e06fe9ad3e20d79f1ee103c7 234 Gene3D G3DSA:3.40.50.2300 1 121 1.9E-34 T 23-04-2016 RR42_RS20435 85f1b168e06fe9ad3e20d79f1ee103c7 234 Pfam PF02954 Bacterial regulatory protein, Fis family 182 220 6.7E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS20435 85f1b168e06fe9ad3e20d79f1ee103c7 234 Gene3D G3DSA:1.10.10.60 175 222 4.0E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS20435 85f1b168e06fe9ad3e20d79f1ee103c7 234 PANTHER PTHR26402 2 125 1.1E-36 T 23-04-2016 RR42_RS20435 85f1b168e06fe9ad3e20d79f1ee103c7 234 Pfam PF00072 Response regulator receiver domain 4 114 4.5E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS20435 85f1b168e06fe9ad3e20d79f1ee103c7 234 SMART SM00448 2 114 5.2E-33 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS20435 85f1b168e06fe9ad3e20d79f1ee103c7 234 SUPERFAMILY SSF52172 1 121 1.05E-36 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS20435 85f1b168e06fe9ad3e20d79f1ee103c7 234 SUPERFAMILY SSF46689 164 222 4.93E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS19585 58148f340eb7da66669cf34f485d8bce 137 Gene3D G3DSA:3.10.180.10 8 133 1.3E-26 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS19585 58148f340eb7da66669cf34f485d8bce 137 PANTHER PTHR10374 2 132 1.6E-29 T 23-04-2016 RR42_RS19585 58148f340eb7da66669cf34f485d8bce 137 PANTHER PTHR10374:SF9 2 132 1.6E-29 T 23-04-2016 RR42_RS19585 58148f340eb7da66669cf34f485d8bce 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 129 4.1E-11 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RR42_RS19585 58148f340eb7da66669cf34f485d8bce 137 SUPERFAMILY SSF54593 4 133 2.69E-25 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS16530 354741a9b2003c5df85d7bb636852faa 314 Gene3D G3DSA:3.60.21.10 57 277 2.9E-31 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS16530 354741a9b2003c5df85d7bb636852faa 314 PANTHER PTHR22953 57 247 1.4E-16 T 23-04-2016 RR42_RS16530 354741a9b2003c5df85d7bb636852faa 314 Pfam PF00149 Calcineurin-like phosphoesterase 57 248 3.7E-13 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RR42_RS16530 354741a9b2003c5df85d7bb636852faa 314 SUPERFAMILY SSF56300 57 273 1.33E-44 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS13795 45f0af799d36c69a736de4fd93f89660 255 PANTHER PTHR30363:SF1 1 255 1.6E-99 T 23-04-2016 RR42_RS13795 45f0af799d36c69a736de4fd93f89660 255 SUPERFAMILY SSF46785 3 59 5.4E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS13795 45f0af799d36c69a736de4fd93f89660 255 Pfam PF00455 DeoR C terminal sensor domain 75 233 8.7E-53 T 23-04-2016 IPR014036 DeoR C-terminal sensor domain RR42_RS13795 45f0af799d36c69a736de4fd93f89660 255 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 5.0E-16 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RR42_RS13795 45f0af799d36c69a736de4fd93f89660 255 Gene3D G3DSA:3.30.750.70 78 157 9.7E-11 T 23-04-2016 RR42_RS13795 45f0af799d36c69a736de4fd93f89660 255 SMART SM01134 73 234 3.1E-72 T 23-04-2016 RR42_RS13795 45f0af799d36c69a736de4fd93f89660 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.4E-8 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RR42_RS13795 45f0af799d36c69a736de4fd93f89660 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.4E-8 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RR42_RS13795 45f0af799d36c69a736de4fd93f89660 255 SUPERFAMILY SSF100950 75 233 3.56E-25 T 23-04-2016 RR42_RS13795 45f0af799d36c69a736de4fd93f89660 255 SMART SM00420 6 58 5.6E-15 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RR42_RS13795 45f0af799d36c69a736de4fd93f89660 255 PANTHER PTHR30363 1 255 1.6E-99 T 23-04-2016 RR42_RS13795 45f0af799d36c69a736de4fd93f89660 255 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 23-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 RR42_RS13795 45f0af799d36c69a736de4fd93f89660 255 Gene3D G3DSA:1.10.10.10 1 62 5.2E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS16495 4be9bc800d14b7e36ce64618d538f37d 273 SUPERFAMILY SSF56752 16 252 1.31E-28 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RR42_RS16495 4be9bc800d14b7e36ce64618d538f37d 273 Gene3D G3DSA:3.30.470.10 29 73 6.4E-4 T 23-04-2016 RR42_RS16495 4be9bc800d14b7e36ce64618d538f37d 273 Gene3D G3DSA:3.20.10.10 132 252 1.2E-11 T 23-04-2016 RR42_RS16495 4be9bc800d14b7e36ce64618d538f37d 273 Pfam PF01063 Amino-transferase class IV 32 245 1.2E-26 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RR42_RS02150 a795222971d9e7402d6ae17fb096dc75 418 Gene3D G3DSA:1.20.1250.20 38 216 2.8E-28 T 23-04-2016 RR42_RS02150 a795222971d9e7402d6ae17fb096dc75 418 Gene3D G3DSA:1.20.1250.20 228 410 5.0E-21 T 23-04-2016 RR42_RS02150 a795222971d9e7402d6ae17fb096dc75 418 PRINTS PR01035 Tetracycline resistance protein signature 130 151 2.2E-6 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RR42_RS02150 a795222971d9e7402d6ae17fb096dc75 418 PRINTS PR01035 Tetracycline resistance protein signature 45 61 2.2E-6 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RR42_RS02150 a795222971d9e7402d6ae17fb096dc75 418 PRINTS PR01035 Tetracycline resistance protein signature 73 92 2.2E-6 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RR42_RS02150 a795222971d9e7402d6ae17fb096dc75 418 PRINTS PR01035 Tetracycline resistance protein signature 319 339 2.2E-6 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RR42_RS02150 a795222971d9e7402d6ae17fb096dc75 418 PRINTS PR01035 Tetracycline resistance protein signature 189 209 2.2E-6 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RR42_RS02150 a795222971d9e7402d6ae17fb096dc75 418 PANTHER PTHR23510 26 415 5.7E-98 T 23-04-2016 RR42_RS02150 a795222971d9e7402d6ae17fb096dc75 418 Pfam PF07690 Major Facilitator Superfamily 243 413 8.4E-13 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS02150 a795222971d9e7402d6ae17fb096dc75 418 Pfam PF07690 Major Facilitator Superfamily 42 220 4.5E-29 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS02150 a795222971d9e7402d6ae17fb096dc75 418 PANTHER PTHR23510:SF6 26 415 5.7E-98 T 23-04-2016 RR42_RS02150 a795222971d9e7402d6ae17fb096dc75 418 ProSitePatterns PS00216 Sugar transport proteins signature 1. 91 107 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RR42_RS02150 a795222971d9e7402d6ae17fb096dc75 418 SUPERFAMILY SSF103473 16 410 2.22E-59 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS04785 59924f79b4eb561ceb7a7f32ae8157c1 381 Gene3D G3DSA:3.40.50.2300 197 299 8.3E-5 T 23-04-2016 RR42_RS04785 59924f79b4eb561ceb7a7f32ae8157c1 381 Pfam PF02608 Basic membrane protein 51 335 1.6E-61 T 23-04-2016 IPR003760 Basic membrane lipoprotein GO:0005886 RR42_RS04785 59924f79b4eb561ceb7a7f32ae8157c1 381 SUPERFAMILY SSF53822 203 301 6.83E-6 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RR42_RS04785 59924f79b4eb561ceb7a7f32ae8157c1 381 PANTHER PTHR34296 2 372 9.7E-126 T 23-04-2016 RR42_RS04785 59924f79b4eb561ceb7a7f32ae8157c1 381 PANTHER PTHR34296:SF1 2 372 9.7E-126 T 23-04-2016 RR42_RS04785 59924f79b4eb561ceb7a7f32ae8157c1 381 Gene3D G3DSA:3.40.50.2300 46 187 9.7E-47 T 23-04-2016 RR42_RS02745 1c50f95dee00472d506b6b524f293f3c 460 Pfam PF05195 Aminopeptidase P, N-terminal domain 13 130 9.3E-36 T 23-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 RR42_RS02745 1c50f95dee00472d506b6b524f293f3c 460 SUPERFAMILY SSF53092 13 182 1.1E-50 T 23-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal RR42_RS02745 1c50f95dee00472d506b6b524f293f3c 460 PANTHER PTHR10804 13 454 6.1E-141 T 23-04-2016 RR42_RS02745 1c50f95dee00472d506b6b524f293f3c 460 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 360 372 - T 23-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site RR42_RS02745 1c50f95dee00472d506b6b524f293f3c 460 Gene3D G3DSA:3.40.350.10 13 186 1.5E-49 T 23-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RR42_RS02745 1c50f95dee00472d506b6b524f293f3c 460 SUPERFAMILY SSF55920 184 455 1.19E-81 T 23-04-2016 IPR000994 Peptidase M24, structural domain RR42_RS02745 1c50f95dee00472d506b6b524f293f3c 460 Pfam PF00557 Metallopeptidase family M24 189 431 5.9E-65 T 23-04-2016 IPR000994 Peptidase M24, structural domain RR42_RS02745 1c50f95dee00472d506b6b524f293f3c 460 SMART SM01011 7 144 2.7E-60 T 23-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 RR42_RS02745 1c50f95dee00472d506b6b524f293f3c 460 Gene3D G3DSA:3.90.230.10 187 455 1.0E-81 T 23-04-2016 IPR000994 Peptidase M24, structural domain RR42_RS02745 1c50f95dee00472d506b6b524f293f3c 460 PANTHER PTHR10804:SF17 13 454 6.1E-141 T 23-04-2016 RR42_RS05765 bef2d2e3ba6e1038dd92918446631827 213 Gene3D G3DSA:1.20.1050.10 87 207 8.3E-38 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS05765 bef2d2e3ba6e1038dd92918446631827 213 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 74 1.0E-13 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RR42_RS05765 bef2d2e3ba6e1038dd92918446631827 213 SUPERFAMILY SSF47616 72 202 1.85E-21 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS05765 bef2d2e3ba6e1038dd92918446631827 213 Gene3D G3DSA:3.40.30.10 1 86 1.4E-15 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS05765 bef2d2e3ba6e1038dd92918446631827 213 PANTHER PTHR11260 2 201 1.1E-21 T 23-04-2016 RR42_RS05765 bef2d2e3ba6e1038dd92918446631827 213 Pfam PF13410 Glutathione S-transferase, C-terminal domain 119 187 1.1E-6 T 23-04-2016 RR42_RS05765 bef2d2e3ba6e1038dd92918446631827 213 SUPERFAMILY SSF52833 1 95 6.41E-15 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS09190 7b267d44a209cb03bdf610483afd3e8b 483 Pfam PF00155 Aminotransferase class I and II 145 414 1.7E-20 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RR42_RS09190 7b267d44a209cb03bdf610483afd3e8b 483 SMART SM00345 17 76 7.5E-15 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS09190 7b267d44a209cb03bdf610483afd3e8b 483 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 3.2E-5 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS09190 7b267d44a209cb03bdf610483afd3e8b 483 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 3.2E-5 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS09190 7b267d44a209cb03bdf610483afd3e8b 483 SUPERFAMILY SSF53383 115 472 1.67E-85 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS09190 7b267d44a209cb03bdf610483afd3e8b 483 Gene3D G3DSA:3.40.640.10 152 363 1.0E-57 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS09190 7b267d44a209cb03bdf610483afd3e8b 483 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 8.9E-16 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS09190 7b267d44a209cb03bdf610483afd3e8b 483 SUPERFAMILY SSF46785 7 78 9.05E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS09190 7b267d44a209cb03bdf610483afd3e8b 483 PANTHER PTHR11751 97 483 3.1E-125 T 23-04-2016 RR42_RS09190 7b267d44a209cb03bdf610483afd3e8b 483 PANTHER PTHR11751:SF287 97 483 3.1E-125 T 23-04-2016 RR42_RS09190 7b267d44a209cb03bdf610483afd3e8b 483 Gene3D G3DSA:1.10.10.10 10 78 2.9E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS14750 30abe1ff823400581e748a90f0725d59 456 PANTHER PTHR30624 10 456 1.8E-140 T 23-04-2016 RR42_RS14750 30abe1ff823400581e748a90f0725d59 456 PANTHER PTHR30624:SF1 10 456 1.8E-140 T 23-04-2016 RR42_RS14750 30abe1ff823400581e748a90f0725d59 456 Pfam PF01523 Putative modulator of DNA gyrase 41 328 1.1E-51 T 23-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RR42_RS14750 30abe1ff823400581e748a90f0725d59 456 SUPERFAMILY SSF111283 16 454 1.09E-119 T 23-04-2016 RR42_RS08925 d63c4bf4260229fe8bf51ab4576b44f0 226 Pfam PF02613 Nitrate reductase delta subunit 48 162 4.6E-11 T 23-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RR42_RS08925 d63c4bf4260229fe8bf51ab4576b44f0 226 SUPERFAMILY SSF89155 7 168 4.32E-32 T 23-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RR42_RS08925 d63c4bf4260229fe8bf51ab4576b44f0 226 PANTHER PTHR30598:SF1 1 218 6.3E-49 T 23-04-2016 RR42_RS08925 d63c4bf4260229fe8bf51ab4576b44f0 226 PANTHER PTHR30598 1 218 6.3E-49 T 23-04-2016 RR42_RS08925 d63c4bf4260229fe8bf51ab4576b44f0 226 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 14 165 4.4E-37 T 23-04-2016 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 RR42_RS16020 8ffc082b316508a366766061e1cc5075 689 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 568 688 1.1E-39 T 23-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RR42_RS16020 8ffc082b316508a366766061e1cc5075 689 Gene3D G3DSA:1.10.730.10 384 540 1.2E-38 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS16020 8ffc082b316508a366766061e1cc5075 689 Hamap MF_00098 Methionine--tRNA ligase [metG]. 4 551 39.174 T 23-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RR42_RS16020 8ffc082b316508a366766061e1cc5075 689 Pfam PF01588 Putative tRNA binding domain 589 685 6.0E-22 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 RR42_RS16020 8ffc082b316508a366766061e1cc5075 689 Gene3D G3DSA:3.40.50.620 181 383 3.4E-84 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS16020 8ffc082b316508a366766061e1cc5075 689 Gene3D G3DSA:3.40.50.620 5 142 3.4E-84 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS16020 8ffc082b316508a366766061e1cc5075 689 SUPERFAMILY SSF47323 393 551 9.72E-38 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS16020 8ffc082b316508a366766061e1cc5075 689 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 518 5.4E-162 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RR42_RS16020 8ffc082b316508a366766061e1cc5075 689 Pfam PF09334 tRNA synthetases class I (M) 6 400 9.0E-145 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS16020 8ffc082b316508a366766061e1cc5075 689 PRINTS PR01041 Methionyl-tRNA synthetase signature 40 54 5.5E-22 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RR42_RS16020 8ffc082b316508a366766061e1cc5075 689 PRINTS PR01041 Methionyl-tRNA synthetase signature 88 99 5.5E-22 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RR42_RS16020 8ffc082b316508a366766061e1cc5075 689 PRINTS PR01041 Methionyl-tRNA synthetase signature 294 309 5.5E-22 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RR42_RS16020 8ffc082b316508a366766061e1cc5075 689 PRINTS PR01041 Methionyl-tRNA synthetase signature 255 266 5.5E-22 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RR42_RS16020 8ffc082b316508a366766061e1cc5075 689 PRINTS PR01041 Methionyl-tRNA synthetase signature 8 21 5.5E-22 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RR42_RS16020 8ffc082b316508a366766061e1cc5075 689 PRINTS PR01041 Methionyl-tRNA synthetase signature 388 399 5.5E-22 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RR42_RS16020 8ffc082b316508a366766061e1cc5075 689 SUPERFAMILY SSF50249 582 688 1.4E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS16020 8ffc082b316508a366766061e1cc5075 689 Gene3D G3DSA:2.40.50.140 576 688 5.1E-42 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS16020 8ffc082b316508a366766061e1cc5075 689 SUPERFAMILY SSF52374 4 139 2.82E-92 T 23-04-2016 RR42_RS16020 8ffc082b316508a366766061e1cc5075 689 SUPERFAMILY SSF52374 174 390 2.82E-92 T 23-04-2016 RR42_RS16020 8ffc082b316508a366766061e1cc5075 689 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 13 24 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS16020 8ffc082b316508a366766061e1cc5075 689 PANTHER PTHR11946:SF86 4 640 2.2E-206 T 23-04-2016 RR42_RS16020 8ffc082b316508a366766061e1cc5075 689 Gene3D G3DSA:2.20.28.20 143 174 9.5E-18 T 23-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RR42_RS16020 8ffc082b316508a366766061e1cc5075 689 PANTHER PTHR11946 4 640 2.2E-206 T 23-04-2016 RR42_RS16020 8ffc082b316508a366766061e1cc5075 689 SUPERFAMILY SSF57770 140 174 1.05E-11 T 23-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RR42_RS07365 481d1c6387044e61d00de29c41181ec9 895 SUPERFAMILY SSF52922 707 893 3.81E-59 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RR42_RS07365 481d1c6387044e61d00de29c41181ec9 895 PANTHER PTHR11624 479 541 0.0 T 23-04-2016 IPR033247 Transketolase family RR42_RS07365 481d1c6387044e61d00de29c41181ec9 895 PANTHER PTHR11624 368 457 0.0 T 23-04-2016 IPR033247 Transketolase family RR42_RS07365 481d1c6387044e61d00de29c41181ec9 895 PANTHER PTHR11624 82 300 0.0 T 23-04-2016 IPR033247 Transketolase family RR42_RS07365 481d1c6387044e61d00de29c41181ec9 895 PANTHER PTHR11624 559 775 0.0 T 23-04-2016 IPR033247 Transketolase family RR42_RS07365 481d1c6387044e61d00de29c41181ec9 895 PANTHER PTHR11624 794 877 0.0 T 23-04-2016 IPR033247 Transketolase family RR42_RS07365 481d1c6387044e61d00de29c41181ec9 895 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 91 302 8.5E-9 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RR42_RS07365 481d1c6387044e61d00de29c41181ec9 895 Gene3D G3DSA:3.40.50.920 714 893 6.8E-75 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RR42_RS07365 481d1c6387044e61d00de29c41181ec9 895 Gene3D G3DSA:3.40.50.970 477 710 2.9E-121 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS07365 481d1c6387044e61d00de29c41181ec9 895 PIRSF PIRSF000156 5 895 0.0 T 23-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 RR42_RS07365 481d1c6387044e61d00de29c41181ec9 895 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 13 894 0.0 T 23-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 RR42_RS07365 481d1c6387044e61d00de29c41181ec9 895 SUPERFAMILY SSF52518 478 705 7.65E-99 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS07365 481d1c6387044e61d00de29c41181ec9 895 SUPERFAMILY SSF52518 65 472 1.37E-136 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS07365 481d1c6387044e61d00de29c41181ec9 895 PANTHER PTHR11624:SF67 479 541 0.0 T 23-04-2016 RR42_RS07365 481d1c6387044e61d00de29c41181ec9 895 PANTHER PTHR11624:SF67 368 457 0.0 T 23-04-2016 RR42_RS07365 481d1c6387044e61d00de29c41181ec9 895 PANTHER PTHR11624:SF67 82 300 0.0 T 23-04-2016 RR42_RS07365 481d1c6387044e61d00de29c41181ec9 895 PANTHER PTHR11624:SF67 559 775 0.0 T 23-04-2016 RR42_RS07365 481d1c6387044e61d00de29c41181ec9 895 PANTHER PTHR11624:SF67 794 877 0.0 T 23-04-2016 RR42_RS07365 481d1c6387044e61d00de29c41181ec9 895 Gene3D G3DSA:3.40.50.970 65 473 8.6E-155 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS15075 9e878a4cb3e51435eace08405ce83ba8 261 SUPERFAMILY SSF51556 4 258 1.7E-47 T 23-04-2016 IPR032466 Metal-dependent hydrolase RR42_RS15075 9e878a4cb3e51435eace08405ce83ba8 261 PANTHER PTHR35563 1 260 3.4E-32 T 23-04-2016 RR42_RS15075 9e878a4cb3e51435eace08405ce83ba8 261 Gene3D G3DSA:3.20.20.140 4 258 3.7E-60 T 23-04-2016 RR42_RS15075 9e878a4cb3e51435eace08405ce83ba8 261 PANTHER PTHR35563:SF1 1 260 3.4E-32 T 23-04-2016 RR42_RS15075 9e878a4cb3e51435eace08405ce83ba8 261 Pfam PF04909 Amidohydrolase 4 232 2.8E-19 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RR42_RS01700 373c8f1e8a6e718a38838a0ecc7c83aa 661 PANTHER PTHR24423 396 650 5.7E-73 T 23-04-2016 RR42_RS01700 373c8f1e8a6e718a38838a0ecc7c83aa 661 PANTHER PTHR24423 106 204 5.7E-73 T 23-04-2016 RR42_RS01700 373c8f1e8a6e718a38838a0ecc7c83aa 661 SUPERFAMILY SSF55874 477 639 1.03E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS01700 373c8f1e8a6e718a38838a0ecc7c83aa 661 SMART SM00387 529 641 1.8E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS01700 373c8f1e8a6e718a38838a0ecc7c83aa 661 Gene3D G3DSA:3.30.565.10 472 641 5.0E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS01700 373c8f1e8a6e718a38838a0ecc7c83aa 661 Pfam PF02743 Cache domain 60 242 1.1E-13 T 23-04-2016 IPR033479 Double Cache domain 1 RR42_RS01700 373c8f1e8a6e718a38838a0ecc7c83aa 661 PIRSF PIRSF036431 24 647 4.7E-223 T 23-04-2016 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) RR42_RS01700 373c8f1e8a6e718a38838a0ecc7c83aa 661 Gene3D G3DSA:1.10.287.130 416 471 2.5E-4 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS01700 373c8f1e8a6e718a38838a0ecc7c83aa 661 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 530 638 3.1E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS01700 373c8f1e8a6e718a38838a0ecc7c83aa 661 SMART SM00388 419 487 0.0089 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS01700 373c8f1e8a6e718a38838a0ecc7c83aa 661 SUPERFAMILY SSF103190 74 204 1.63E-12 T 23-04-2016 IPR029151 Periplasmic sensor domain-like RR42_RS01700 373c8f1e8a6e718a38838a0ecc7c83aa 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 619 9.15E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS01700 373c8f1e8a6e718a38838a0ecc7c83aa 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 584 9.15E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS01700 373c8f1e8a6e718a38838a0ecc7c83aa 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 598 9.15E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS01700 373c8f1e8a6e718a38838a0ecc7c83aa 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 638 9.15E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS01700 373c8f1e8a6e718a38838a0ecc7c83aa 661 PANTHER PTHR24423:SF451 396 650 5.7E-73 T 23-04-2016 RR42_RS01700 373c8f1e8a6e718a38838a0ecc7c83aa 661 PANTHER PTHR24423:SF451 106 204 5.7E-73 T 23-04-2016 RR42_RS01700 373c8f1e8a6e718a38838a0ecc7c83aa 661 SUPERFAMILY SSF47384 404 482 1.18E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS08860 182aafd5d6aebeb4348299975d7795eb 239 SUPERFAMILY SSF102114 36 211 3.01E-24 T 23-04-2016 RR42_RS08860 182aafd5d6aebeb4348299975d7795eb 239 Gene3D G3DSA:3.20.20.70 37 210 6.9E-22 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS08860 182aafd5d6aebeb4348299975d7795eb 239 PANTHER PTHR30352 22 202 2.9E-27 T 23-04-2016 RR42_RS08860 182aafd5d6aebeb4348299975d7795eb 239 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 23 209 1.7E-54 T 23-04-2016 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein RR42_RS08860 182aafd5d6aebeb4348299975d7795eb 239 Pfam PF13353 4Fe-4S single cluster domain 38 112 5.9E-7 T 23-04-2016 RR42_RS08860 182aafd5d6aebeb4348299975d7795eb 239 Pfam PF04055 Radical SAM superfamily 43 173 4.7E-14 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RR42_RS17165 c2cadc62b427964783ffffa7914fb466 103 Pfam PF06865 Protein of unknown function (DUF1255) 11 102 1.2E-37 T 23-04-2016 IPR009664 Protein of unknown function DUF1255 RR42_RS17165 c2cadc62b427964783ffffa7914fb466 103 SUPERFAMILY SSF51182 10 102 1.19E-35 T 23-04-2016 IPR011051 RmlC-like cupin domain RR42_RS17165 c2cadc62b427964783ffffa7914fb466 103 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 10 103 28.676 T 23-04-2016 IPR009664 Protein of unknown function DUF1255 RR42_RS17165 c2cadc62b427964783ffffa7914fb466 103 PANTHER PTHR36540 2 102 2.5E-32 T 23-04-2016 RR42_RS17165 c2cadc62b427964783ffffa7914fb466 103 PANTHER PTHR36540:SF1 2 102 2.5E-32 T 23-04-2016 RR42_RS17165 c2cadc62b427964783ffffa7914fb466 103 Gene3D G3DSA:2.60.120.10 10 102 1.6E-38 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS05440 85ed56724caafd0a6aa58eb95c04ab20 163 SUPERFAMILY SSF55021 79 162 3.2E-25 T 23-04-2016 RR42_RS05440 85ed56724caafd0a6aa58eb95c04ab20 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 9.0E-37 T 23-04-2016 RR42_RS05440 85ed56724caafd0a6aa58eb95c04ab20 163 Gene3D G3DSA:3.30.70.1150 83 162 1.8E-28 T 23-04-2016 RR42_RS05440 85ed56724caafd0a6aa58eb95c04ab20 163 Pfam PF13710 ACT domain 12 73 2.0E-15 T 23-04-2016 RR42_RS05440 85ed56724caafd0a6aa58eb95c04ab20 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 157 2.4E-63 T 23-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RR42_RS05440 85ed56724caafd0a6aa58eb95c04ab20 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 7.5E-26 T 23-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RR42_RS05440 85ed56724caafd0a6aa58eb95c04ab20 163 Gene3D G3DSA:3.30.70.260 1 78 1.7E-36 T 23-04-2016 RR42_RS05440 85ed56724caafd0a6aa58eb95c04ab20 163 SUPERFAMILY SSF55021 1 76 2.37E-22 T 23-04-2016 RR42_RS05440 85ed56724caafd0a6aa58eb95c04ab20 163 PANTHER PTHR30239 1 161 1.7E-83 T 23-04-2016 RR42_RS14465 85ea404eddb4f884aa75e7ef00dd2714 327 Gene3D G3DSA:3.90.110.10 156 326 9.8E-70 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RR42_RS14465 85ea404eddb4f884aa75e7ef00dd2714 327 SUPERFAMILY SSF56327 158 326 2.62E-57 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RR42_RS14465 85ea404eddb4f884aa75e7ef00dd2714 327 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 4 320 4.2E-145 T 23-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 RR42_RS14465 85ea404eddb4f884aa75e7ef00dd2714 327 Gene3D G3DSA:3.40.50.720 4 154 2.9E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS14465 85ea404eddb4f884aa75e7ef00dd2714 327 PIRSF PIRSF000102 2 325 1.9E-62 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RR42_RS14465 85ea404eddb4f884aa75e7ef00dd2714 327 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 158 319 4.4E-30 T 23-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 RR42_RS14465 85ea404eddb4f884aa75e7ef00dd2714 327 SUPERFAMILY SSF51735 4 156 3.67E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS14465 85ea404eddb4f884aa75e7ef00dd2714 327 PANTHER PTHR23382 2 327 4.3E-194 T 23-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 RR42_RS14465 85ea404eddb4f884aa75e7ef00dd2714 327 Hamap MF_01517 Malate dehydrogenase [mdh]. 2 326 55.793 T 23-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 RR42_RS14465 85ea404eddb4f884aa75e7ef00dd2714 327 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 6 153 6.4E-38 T 23-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 RR42_RS08670 5291ee743463571b58a1e250ec72f8be 218 PANTHER PTHR13604 2 210 3.3E-18 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RR42_RS08670 5291ee743463571b58a1e250ec72f8be 218 Pfam PF02586 SOS response associated peptidase (SRAP) 29 210 1.1E-27 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RR42_RS08670 5291ee743463571b58a1e250ec72f8be 218 Gene3D G3DSA:3.90.1680.10 28 212 6.8E-34 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RR42_RS08670 5291ee743463571b58a1e250ec72f8be 218 SUPERFAMILY SSF143081 2 210 4.97E-53 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RR42_RS18075 1f2ecb5e16aacb076efe07bf1ea16f8c 356 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 1.7E-37 T 23-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RR42_RS18075 1f2ecb5e16aacb076efe07bf1ea16f8c 356 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 3 349 9.9E-107 T 23-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RR42_RS18075 1f2ecb5e16aacb076efe07bf1ea16f8c 356 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 354 36.63 T 23-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RR42_RS18075 1f2ecb5e16aacb076efe07bf1ea16f8c 356 Gene3D G3DSA:3.40.50.2000 188 352 1.9E-29 T 23-04-2016 RR42_RS18075 1f2ecb5e16aacb076efe07bf1ea16f8c 356 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 334 2.7E-37 T 23-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RR42_RS18075 1f2ecb5e16aacb076efe07bf1ea16f8c 356 PANTHER PTHR21015:SF22 7 355 1.4E-115 T 23-04-2016 RR42_RS18075 1f2ecb5e16aacb076efe07bf1ea16f8c 356 Gene3D G3DSA:3.40.50.2000 3 187 1.8E-71 T 23-04-2016 RR42_RS18075 1f2ecb5e16aacb076efe07bf1ea16f8c 356 SUPERFAMILY SSF53756 6 354 7.4E-125 T 23-04-2016 RR42_RS18075 1f2ecb5e16aacb076efe07bf1ea16f8c 356 PANTHER PTHR21015 7 355 1.4E-115 T 23-04-2016 RR42_RS03040 46e5d2f560996d07098136bd35a6f311 487 PANTHER PTHR30203 16 487 1.1E-147 T 23-04-2016 RR42_RS03040 46e5d2f560996d07098136bd35a6f311 487 SUPERFAMILY SSF56954 5 30 1.2E-88 T 23-04-2016 RR42_RS03040 46e5d2f560996d07098136bd35a6f311 487 SUPERFAMILY SSF56954 61 473 1.2E-88 T 23-04-2016 RR42_RS03040 46e5d2f560996d07098136bd35a6f311 487 PANTHER PTHR30203:SF5 16 487 1.1E-147 T 23-04-2016 RR42_RS03040 46e5d2f560996d07098136bd35a6f311 487 Gene3D G3DSA:1.20.1600.10 61 474 7.0E-91 T 23-04-2016 RR42_RS03040 46e5d2f560996d07098136bd35a6f311 487 Pfam PF02321 Outer membrane efflux protein 70 260 3.0E-18 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RR42_RS03040 46e5d2f560996d07098136bd35a6f311 487 Pfam PF02321 Outer membrane efflux protein 290 468 1.6E-19 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RR42_RS03040 46e5d2f560996d07098136bd35a6f311 487 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 14 470 1.6E-87 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RR42_RS05915 1ac829b6c7b32f3d0e0ecaf77d512874 305 Gene3D G3DSA:3.40.50.10330 12 156 1.4E-35 T 23-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RR42_RS05915 1ac829b6c7b32f3d0e0ecaf77d512874 305 PANTHER PTHR20275 11 295 1.7E-85 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RR42_RS05915 1ac829b6c7b32f3d0e0ecaf77d512874 305 SUPERFAMILY SSF111331 16 297 4.32E-87 T 23-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain RR42_RS05915 1ac829b6c7b32f3d0e0ecaf77d512874 305 Pfam PF01513 ATP-NAD kinase 65 277 1.1E-57 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RR42_RS05915 1ac829b6c7b32f3d0e0ecaf77d512874 305 Gene3D G3DSA:2.60.200.30 157 269 1.4E-43 T 23-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RR42_RS05915 1ac829b6c7b32f3d0e0ecaf77d512874 305 Hamap MF_00361 NAD kinase [nadK]. 15 295 32.487 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RR42_RS19410 e7f6e3b227e4c045769ed5a7cd164628 238 SMART SM00895 100 222 6.3E-21 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS19410 e7f6e3b227e4c045769ed5a7cd164628 238 SUPERFAMILY SSF46785 25 94 1.98E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19410 e7f6e3b227e4c045769ed5a7cd164628 238 Gene3D G3DSA:1.20.120.530 94 230 1.6E-25 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS19410 e7f6e3b227e4c045769ed5a7cd164628 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 32 90 3.6E-18 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS19410 e7f6e3b227e4c045769ed5a7cd164628 238 SMART SM00345 32 90 4.8E-16 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS19410 e7f6e3b227e4c045769ed5a7cd164628 238 Gene3D G3DSA:1.10.10.10 24 91 1.5E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19410 e7f6e3b227e4c045769ed5a7cd164628 238 SUPERFAMILY SSF48008 99 225 7.59E-25 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS19410 e7f6e3b227e4c045769ed5a7cd164628 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 64 80 2.5E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS19410 e7f6e3b227e4c045769ed5a7cd164628 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 64 2.5E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS19410 e7f6e3b227e4c045769ed5a7cd164628 238 Pfam PF07729 FCD domain 100 220 8.1E-27 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS19410 e7f6e3b227e4c045769ed5a7cd164628 238 PANTHER PTHR11751 32 116 7.4E-23 T 23-04-2016 RR42_RS19410 e7f6e3b227e4c045769ed5a7cd164628 238 PANTHER PTHR11751:SF436 32 116 7.4E-23 T 23-04-2016 RR42_RS13920 9d359808227e8fa0e916fcabe0af0081 218 PRINTS PR01217 Proline rich extensin signature 101 118 3.7E-11 T 23-04-2016 RR42_RS13920 9d359808227e8fa0e916fcabe0af0081 218 PRINTS PR01217 Proline rich extensin signature 80 96 3.7E-11 T 23-04-2016 RR42_RS13920 9d359808227e8fa0e916fcabe0af0081 218 PRINTS PR01217 Proline rich extensin signature 47 59 3.7E-11 T 23-04-2016 RR42_RS13920 9d359808227e8fa0e916fcabe0af0081 218 PRINTS PR01217 Proline rich extensin signature 59 80 3.7E-11 T 23-04-2016 RR42_RS13920 9d359808227e8fa0e916fcabe0af0081 218 Gene3D G3DSA:3.30.1150.10 103 218 2.2E-16 T 23-04-2016 RR42_RS13920 9d359808227e8fa0e916fcabe0af0081 218 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 141 218 4.1E-17 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 RR42_RS13920 9d359808227e8fa0e916fcabe0af0081 218 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 139 217 5.2E-22 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 RR42_RS13920 9d359808227e8fa0e916fcabe0af0081 218 PANTHER PTHR33446:SF2 33 218 3.3E-13 T 23-04-2016 RR42_RS13920 9d359808227e8fa0e916fcabe0af0081 218 SUPERFAMILY SSF74653 102 218 9.55E-25 T 23-04-2016 RR42_RS13920 9d359808227e8fa0e916fcabe0af0081 218 PANTHER PTHR33446 33 218 3.3E-13 T 23-04-2016 RR42_RS00390 11deb520642ded061dfb0980d2468571 422 SUPERFAMILY SSF53187 45 233 1.73E-84 T 23-04-2016 RR42_RS00390 11deb520642ded061dfb0980d2468571 422 SUPERFAMILY SSF53187 334 420 1.73E-84 T 23-04-2016 RR42_RS00390 11deb520642ded061dfb0980d2468571 422 PANTHER PTHR11014:SF63 47 422 3.4E-147 T 23-04-2016 RR42_RS00390 11deb520642ded061dfb0980d2468571 422 Pfam PF01546 Peptidase family M20/M25/M40 107 417 3.9E-35 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RR42_RS00390 11deb520642ded061dfb0980d2468571 422 PANTHER PTHR11014 47 422 3.4E-147 T 23-04-2016 RR42_RS00390 11deb520642ded061dfb0980d2468571 422 SUPERFAMILY SSF55031 219 332 3.4E-32 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS00390 11deb520642ded061dfb0980d2468571 422 PIRSF PIRSF005962 36 422 2.7E-124 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 RR42_RS00390 11deb520642ded061dfb0980d2468571 422 Gene3D G3DSA:3.40.630.10 334 421 5.8E-98 T 23-04-2016 RR42_RS00390 11deb520642ded061dfb0980d2468571 422 Gene3D G3DSA:3.40.630.10 44 214 5.8E-98 T 23-04-2016 RR42_RS00390 11deb520642ded061dfb0980d2468571 422 Pfam PF07687 Peptidase dimerisation domain 221 317 1.5E-10 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS00390 11deb520642ded061dfb0980d2468571 422 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 50 408 4.9E-110 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 RR42_RS00390 11deb520642ded061dfb0980d2468571 422 Gene3D G3DSA:3.30.70.360 217 333 5.4E-43 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS11050 f4f6131ef21e4f579fa474e084c6d280 284 SMART SM01007 50 230 7.6E-62 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal RR42_RS11050 f4f6131ef21e4f579fa474e084c6d280 284 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 50 230 1.3E-49 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal RR42_RS11050 f4f6131ef21e4f579fa474e084c6d280 284 SUPERFAMILY SSF53639 44 267 4.12E-69 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal RR42_RS11050 f4f6131ef21e4f579fa474e084c6d280 284 Gene3D G3DSA:3.40.225.10 45 265 1.4E-67 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal RR42_RS11050 f4f6131ef21e4f579fa474e084c6d280 284 PANTHER PTHR10672 33 279 3.7E-130 T 23-04-2016 RR42_RS11050 f4f6131ef21e4f579fa474e084c6d280 284 PANTHER PTHR10672:SF17 33 279 3.7E-130 T 23-04-2016 RR42_RS18100 f3bdd5db95e3794cc829a38924708c5b 515 Gene3D G3DSA:3.40.1190.10 113 352 4.9E-82 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS18100 f3bdd5db95e3794cc829a38924708c5b 515 SUPERFAMILY SSF53623 113 348 3.79E-73 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS18100 f3bdd5db95e3794cc829a38924708c5b 515 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 12 508 33.112 T 23-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 RR42_RS18100 f3bdd5db95e3794cc829a38924708c5b 515 Gene3D G3DSA:3.40.1390.10 29 109 9.0E-13 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS18100 f3bdd5db95e3794cc829a38924708c5b 515 PANTHER PTHR23135 16 511 9.3E-164 T 23-04-2016 RR42_RS18100 f3bdd5db95e3794cc829a38924708c5b 515 SUPERFAMILY SSF63418 30 109 7.06E-13 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS18100 f3bdd5db95e3794cc829a38924708c5b 515 PANTHER PTHR23135:SF4 16 511 9.3E-164 T 23-04-2016 RR42_RS18100 f3bdd5db95e3794cc829a38924708c5b 515 Pfam PF08245 Mur ligase middle domain 120 328 5.2E-51 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS18100 f3bdd5db95e3794cc829a38924708c5b 515 Pfam PF02875 Mur ligase family, glutamate ligase domain 349 441 8.0E-23 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RR42_RS18100 f3bdd5db95e3794cc829a38924708c5b 515 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 30 506 2.5E-146 T 23-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 RR42_RS18100 f3bdd5db95e3794cc829a38924708c5b 515 SUPERFAMILY SSF53244 349 508 1.83E-47 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RR42_RS18100 f3bdd5db95e3794cc829a38924708c5b 515 Gene3D G3DSA:3.90.190.20 353 502 3.5E-56 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RR42_RS08865 7c785b351f6ae89312a9cb1e285b732c 117 PANTHER PTHR13696:SF62 19 112 5.5E-13 T 23-04-2016 RR42_RS08865 7c785b351f6ae89312a9cb1e285b732c 117 PANTHER PTHR13696 19 112 5.5E-13 T 23-04-2016 RR42_RS08865 7c785b351f6ae89312a9cb1e285b732c 117 Pfam PF01883 Domain of unknown function DUF59 25 83 1.2E-18 T 23-04-2016 IPR002744 Domain of unknown function DUF59 RR42_RS08865 7c785b351f6ae89312a9cb1e285b732c 117 SUPERFAMILY SSF117916 25 116 7.19E-23 T 23-04-2016 RR42_RS03035 f893600afed71ca240b91fb05dcea698 322 SUPERFAMILY SSF111369 46 180 5.1E-24 T 23-04-2016 RR42_RS03035 f893600afed71ca240b91fb05dcea698 322 Gene3D G3DSA:2.40.50.100 47 80 1.7E-18 T 23-04-2016 RR42_RS03035 f893600afed71ca240b91fb05dcea698 322 Gene3D G3DSA:2.40.50.100 153 186 1.7E-18 T 23-04-2016 RR42_RS03035 f893600afed71ca240b91fb05dcea698 322 PANTHER PTHR30367 14 292 1.0E-98 T 23-04-2016 RR42_RS03035 f893600afed71ca240b91fb05dcea698 322 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 238 5.8E-36 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RR42_RS03035 f893600afed71ca240b91fb05dcea698 322 Pfam PF13533 Biotin-lipoyl like 47 95 2.6E-19 T 23-04-2016 RR42_RS03035 f893600afed71ca240b91fb05dcea698 322 Pfam PF13437 HlyD family secretion protein 156 238 2.2E-10 T 23-04-2016 RR42_RS03035 f893600afed71ca240b91fb05dcea698 322 PANTHER PTHR30367:SF5 14 292 1.0E-98 T 23-04-2016 RR42_RS19430 1b72489da1f4bca5e9414ecf2e788643 156 Gene3D G3DSA:3.40.50.620 4 152 2.8E-41 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS19430 1b72489da1f4bca5e9414ecf2e788643 156 Pfam PF00582 Universal stress protein family 6 150 1.2E-33 T 23-04-2016 IPR006016 UspA GO:0006950 RR42_RS19430 1b72489da1f4bca5e9414ecf2e788643 156 PRINTS PR01438 Universal stress protein signature 110 122 3.7E-23 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS19430 1b72489da1f4bca5e9414ecf2e788643 156 PRINTS PR01438 Universal stress protein signature 6 24 3.7E-23 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS19430 1b72489da1f4bca5e9414ecf2e788643 156 PRINTS PR01438 Universal stress protein signature 128 150 3.7E-23 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS19430 1b72489da1f4bca5e9414ecf2e788643 156 PANTHER PTHR31964 1 155 1.6E-32 T 23-04-2016 RR42_RS19430 1b72489da1f4bca5e9414ecf2e788643 156 SUPERFAMILY SSF52402 6 151 3.77E-39 T 23-04-2016 RR42_RS19430 1b72489da1f4bca5e9414ecf2e788643 156 PIRSF PIRSF006276 1 153 1.3E-19 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS19430 1b72489da1f4bca5e9414ecf2e788643 156 PANTHER PTHR31964:SF26 1 155 1.6E-32 T 23-04-2016 RR42_RS01050 281f70e23a5644ca4e672c38d4e4bb80 299 PANTHER PTHR10992 6 298 3.0E-60 T 23-04-2016 RR42_RS01050 281f70e23a5644ca4e672c38d4e4bb80 299 Pfam PF00561 alpha/beta hydrolase fold 34 160 2.9E-23 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS01050 281f70e23a5644ca4e672c38d4e4bb80 299 PANTHER PTHR10992:SF778 6 298 3.0E-60 T 23-04-2016 RR42_RS01050 281f70e23a5644ca4e672c38d4e4bb80 299 SUPERFAMILY SSF53474 10 298 4.42E-72 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS01050 281f70e23a5644ca4e672c38d4e4bb80 299 Gene3D G3DSA:3.40.50.1820 11 298 2.5E-61 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS15090 94c63f655d16ea9e448d38daf2bf143f 787 SUPERFAMILY SSF52540 584 671 3.42E-172 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS15090 94c63f655d16ea9e448d38daf2bf143f 787 SUPERFAMILY SSF52540 1 528 3.42E-172 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS15090 94c63f655d16ea9e448d38daf2bf143f 787 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 272 6.1E-75 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RR42_RS15090 94c63f655d16ea9e448d38daf2bf143f 787 Pfam PF13361 UvrD-like helicase C-terminal domain 278 647 7.6E-70 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RR42_RS15090 94c63f655d16ea9e448d38daf2bf143f 787 PANTHER PTHR11070 1 508 1.6E-205 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RR42_RS15090 94c63f655d16ea9e448d38daf2bf143f 787 PANTHER PTHR11070 560 674 1.6E-205 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RR42_RS15090 94c63f655d16ea9e448d38daf2bf143f 787 Gene3D G3DSA:3.40.50.300 185 286 3.3E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS15090 94c63f655d16ea9e448d38daf2bf143f 787 Gene3D G3DSA:3.40.50.300 2 108 3.3E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS15090 94c63f655d16ea9e448d38daf2bf143f 787 Gene3D G3DSA:1.10.486.10 389 512 9.5E-43 T 23-04-2016 RR42_RS15090 94c63f655d16ea9e448d38daf2bf143f 787 Gene3D G3DSA:1.10.486.10 554 571 9.5E-43 T 23-04-2016 RR42_RS15090 94c63f655d16ea9e448d38daf2bf143f 787 Gene3D G3DSA:1.10.10.160 112 184 2.2E-20 T 23-04-2016 IPR013986 DExx box DNA helicase domain RR42_RS15090 94c63f655d16ea9e448d38daf2bf143f 787 PANTHER PTHR11070:SF7 1 508 1.6E-205 T 23-04-2016 RR42_RS15090 94c63f655d16ea9e448d38daf2bf143f 787 PANTHER PTHR11070:SF7 560 674 1.6E-205 T 23-04-2016 RR42_RS15090 94c63f655d16ea9e448d38daf2bf143f 787 Gene3D G3DSA:3.40.50.300 583 674 5.4E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS15090 94c63f655d16ea9e448d38daf2bf143f 787 Gene3D G3DSA:3.40.50.300 287 388 5.4E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS37570 a1806655eb64a69ccf44ac8151e364be 288 PANTHER PTHR32063:SF30 106 197 4.4E-45 T 23-04-2016 RR42_RS37570 a1806655eb64a69ccf44ac8151e364be 288 SUPERFAMILY SSF111369 2 101 1.57E-20 T 23-04-2016 RR42_RS37570 a1806655eb64a69ccf44ac8151e364be 288 Gene3D G3DSA:2.40.50.100 1 68 1.6E-9 T 23-04-2016 RR42_RS37570 a1806655eb64a69ccf44ac8151e364be 288 SUPERFAMILY SSF82693 128 173 3.45E-7 T 23-04-2016 RR42_RS37570 a1806655eb64a69ccf44ac8151e364be 288 PANTHER PTHR32063 106 197 4.4E-45 T 23-04-2016 RR42_RS37570 a1806655eb64a69ccf44ac8151e364be 288 Pfam PF00873 AcrB/AcrD/AcrF family 104 197 1.2E-18 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS18650 073fcfe8f233a01ccc129b0711634dbf 460 Pfam PF13356 Domain of unknown function (DUF4102) 6 94 1.3E-13 T 23-04-2016 IPR025166 Domain of unknown function DUF4102 RR42_RS18650 073fcfe8f233a01ccc129b0711634dbf 460 PANTHER PTHR30629 1 145 9.3E-53 T 23-04-2016 RR42_RS18650 073fcfe8f233a01ccc129b0711634dbf 460 PANTHER PTHR30629 167 330 9.3E-53 T 23-04-2016 RR42_RS18650 073fcfe8f233a01ccc129b0711634dbf 460 PANTHER PTHR30629 348 448 9.3E-53 T 23-04-2016 RR42_RS18650 073fcfe8f233a01ccc129b0711634dbf 460 Pfam PF00589 Phage integrase family 266 423 1.5E-12 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RR42_RS18650 073fcfe8f233a01ccc129b0711634dbf 460 PANTHER PTHR30629:SF4 1 145 9.3E-53 T 23-04-2016 RR42_RS18650 073fcfe8f233a01ccc129b0711634dbf 460 PANTHER PTHR30629:SF4 167 330 9.3E-53 T 23-04-2016 RR42_RS18650 073fcfe8f233a01ccc129b0711634dbf 460 PANTHER PTHR30629:SF4 348 448 9.3E-53 T 23-04-2016 RR42_RS18650 073fcfe8f233a01ccc129b0711634dbf 460 Gene3D G3DSA:1.10.443.10 247 422 3.2E-24 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RR42_RS18650 073fcfe8f233a01ccc129b0711634dbf 460 SUPERFAMILY SSF56349 171 431 1.88E-32 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RR42_RS17490 9b0ca8cf5aa4f6ed2e3820dac961e4d6 373 Gene3D G3DSA:3.40.50.720 168 198 8.9E-7 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS17490 9b0ca8cf5aa4f6ed2e3820dac961e4d6 373 Gene3D G3DSA:3.40.50.1770 199 368 1.5E-41 T 23-04-2016 RR42_RS17490 9b0ca8cf5aa4f6ed2e3820dac961e4d6 373 Gene3D G3DSA:3.40.50.1770 1 167 7.9E-56 T 23-04-2016 RR42_RS17490 9b0ca8cf5aa4f6ed2e3820dac961e4d6 373 SMART SM01002 145 314 3.2E-86 T 23-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RR42_RS17490 9b0ca8cf5aa4f6ed2e3820dac961e4d6 373 PANTHER PTHR10160 1 369 2.4E-167 T 23-04-2016 RR42_RS17490 9b0ca8cf5aa4f6ed2e3820dac961e4d6 373 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 3.6E-41 T 23-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RR42_RS17490 9b0ca8cf5aa4f6ed2e3820dac961e4d6 373 SUPERFAMILY SSF51735 136 318 1.45E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS17490 9b0ca8cf5aa4f6ed2e3820dac961e4d6 373 SUPERFAMILY SSF52283 1 167 3.49E-50 T 23-04-2016 RR42_RS17490 9b0ca8cf5aa4f6ed2e3820dac961e4d6 373 SMART SM01003 4 136 3.6E-64 T 23-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RR42_RS17490 9b0ca8cf5aa4f6ed2e3820dac961e4d6 373 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 369 3.7E-74 T 23-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RR42_RS14345 ebfd2a331dafcf045db2b16989c25e54 290 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 283 37.55 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RR42_RS14345 ebfd2a331dafcf045db2b16989c25e54 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 231 242 6.7E-39 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RR42_RS14345 ebfd2a331dafcf045db2b16989c25e54 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 131 145 6.7E-39 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RR42_RS14345 ebfd2a331dafcf045db2b16989c25e54 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 202 219 6.7E-39 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RR42_RS14345 ebfd2a331dafcf045db2b16989c25e54 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 253 262 6.7E-39 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RR42_RS14345 ebfd2a331dafcf045db2b16989c25e54 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 165 183 6.7E-39 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RR42_RS14345 ebfd2a331dafcf045db2b16989c25e54 290 SUPERFAMILY SSF52096 27 284 4.39E-84 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS14345 ebfd2a331dafcf045db2b16989c25e54 290 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 285 5.3E-127 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RR42_RS14345 ebfd2a331dafcf045db2b16989c25e54 290 Pfam PF01039 Carboxyl transferase domain 109 242 3.2E-14 T 23-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RR42_RS14345 ebfd2a331dafcf045db2b16989c25e54 290 Gene3D G3DSA:3.90.226.10 22 288 1.4E-70 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS14345 ebfd2a331dafcf045db2b16989c25e54 290 PANTHER PTHR22855:SF17 1 286 9.5E-152 T 23-04-2016 RR42_RS14345 ebfd2a331dafcf045db2b16989c25e54 290 PANTHER PTHR22855 1 286 9.5E-152 T 23-04-2016 RR42_RS07885 1e72ea2e19f96f30da6d5c169e1d284b 240 SUPERFAMILY SSF46894 135 236 6.24E-30 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS07885 1e72ea2e19f96f30da6d5c169e1d284b 240 SMART SM00448 6 117 2.9E-45 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS07885 1e72ea2e19f96f30da6d5c169e1d284b 240 PANTHER PTHR26402:SF292 6 237 1.2E-107 T 23-04-2016 RR42_RS07885 1e72ea2e19f96f30da6d5c169e1d284b 240 Gene3D G3DSA:1.10.10.10 135 236 4.4E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS07885 1e72ea2e19f96f30da6d5c169e1d284b 240 Pfam PF00072 Response regulator receiver domain 8 117 1.1E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS07885 1e72ea2e19f96f30da6d5c169e1d284b 240 PANTHER PTHR26402 6 237 1.2E-107 T 23-04-2016 RR42_RS07885 1e72ea2e19f96f30da6d5c169e1d284b 240 SMART SM00862 158 234 4.4E-26 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS07885 1e72ea2e19f96f30da6d5c169e1d284b 240 SUPERFAMILY SSF52172 4 125 9.96E-43 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS07885 1e72ea2e19f96f30da6d5c169e1d284b 240 Gene3D G3DSA:3.40.50.2300 3 125 1.0E-41 T 23-04-2016 RR42_RS07885 1e72ea2e19f96f30da6d5c169e1d284b 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 234 5.7E-24 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS11135 c2eee546431c2ee320b77ef593df7dc5 257 SUPERFAMILY SSF52540 4 245 4.99E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11135 c2eee546431c2ee320b77ef593df7dc5 257 PANTHER PTHR24220:SF358 6 246 8.3E-89 T 23-04-2016 RR42_RS11135 c2eee546431c2ee320b77ef593df7dc5 257 Pfam PF00005 ABC transporter 21 176 1.3E-24 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS11135 c2eee546431c2ee320b77ef593df7dc5 257 SMART SM00382 29 223 3.7E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS11135 c2eee546431c2ee320b77ef593df7dc5 257 Gene3D G3DSA:3.40.50.300 3 244 1.1E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11135 c2eee546431c2ee320b77ef593df7dc5 257 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 223 245 1.1E-8 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RR42_RS11135 c2eee546431c2ee320b77ef593df7dc5 257 PANTHER PTHR24220 6 246 8.3E-89 T 23-04-2016 RR42_RS35740 1b172a4ad15f949ddcc140818d43102f 152 Gene3D G3DSA:1.10.730.10 63 152 1.7E-23 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS35740 1b172a4ad15f949ddcc140818d43102f 152 SUPERFAMILY SSF52374 1 133 5.62E-19 T 23-04-2016 RR42_RS35740 1b172a4ad15f949ddcc140818d43102f 152 PANTHER PTHR11946:SF86 1 152 3.8E-37 T 23-04-2016 RR42_RS35740 1b172a4ad15f949ddcc140818d43102f 152 PANTHER PTHR11946 1 152 3.8E-37 T 23-04-2016 RR42_RS35740 1b172a4ad15f949ddcc140818d43102f 152 Gene3D G3DSA:3.40.50.620 2 60 3.5E-14 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS35740 1b172a4ad15f949ddcc140818d43102f 152 Pfam PF09334 tRNA synthetases class I (M) 2 85 1.6E-23 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS10980 b8586dda8217e8debef6112397732d7f 260 Pfam PF01261 Xylose isomerase-like TIM barrel 21 218 4.6E-29 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RR42_RS10980 b8586dda8217e8debef6112397732d7f 260 PIRSF PIRSF006241 1 260 1.9E-97 T 23-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 RR42_RS10980 b8586dda8217e8debef6112397732d7f 260 PANTHER PTHR12110 1 258 3.0E-100 T 23-04-2016 RR42_RS10980 b8586dda8217e8debef6112397732d7f 260 SUPERFAMILY SSF51658 1 259 5.53E-82 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RR42_RS10980 b8586dda8217e8debef6112397732d7f 260 PANTHER PTHR12110:SF12 1 258 3.0E-100 T 23-04-2016 RR42_RS10980 b8586dda8217e8debef6112397732d7f 260 Gene3D G3DSA:3.20.20.150 1 259 4.9E-90 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RR42_RS12325 8a7499b553528f15bf9a0bc40de0781b 211 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 81 1.8E-12 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RR42_RS12325 8a7499b553528f15bf9a0bc40de0781b 211 PANTHER PTHR11260:SF178 1 202 1.0E-73 T 23-04-2016 RR42_RS12325 8a7499b553528f15bf9a0bc40de0781b 211 Gene3D G3DSA:1.20.1050.10 84 201 1.2E-39 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS12325 8a7499b553528f15bf9a0bc40de0781b 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 112 197 1.3E-9 T 23-04-2016 IPR004046 Glutathione S-transferase, C-terminal RR42_RS12325 8a7499b553528f15bf9a0bc40de0781b 211 SUPERFAMILY SSF47616 78 203 4.04E-29 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS12325 8a7499b553528f15bf9a0bc40de0781b 211 SUPERFAMILY SSF52833 2 85 8.41E-21 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS12325 8a7499b553528f15bf9a0bc40de0781b 211 Gene3D G3DSA:3.40.30.10 1 83 2.5E-26 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS12325 8a7499b553528f15bf9a0bc40de0781b 211 PANTHER PTHR11260 1 202 1.0E-73 T 23-04-2016 RR42_RS11635 d4b2ed9210408cc3fab09bdd181c8114 154 Gene3D G3DSA:3.10.580.10 1 125 1.3E-27 T 23-04-2016 RR42_RS11635 d4b2ed9210408cc3fab09bdd181c8114 154 SUPERFAMILY SSF54631 1 125 4.67E-26 T 23-04-2016 RR42_RS11635 d4b2ed9210408cc3fab09bdd181c8114 154 Pfam PF00571 CBS domain 72 125 1.9E-10 T 23-04-2016 IPR000644 CBS domain RR42_RS11635 d4b2ed9210408cc3fab09bdd181c8114 154 Pfam PF00571 CBS domain 4 57 3.0E-7 T 23-04-2016 IPR000644 CBS domain RR42_RS11635 d4b2ed9210408cc3fab09bdd181c8114 154 SMART SM00116 10 61 0.0029 T 23-04-2016 IPR000644 CBS domain RR42_RS11635 d4b2ed9210408cc3fab09bdd181c8114 154 SMART SM00116 79 126 5.7E-4 T 23-04-2016 IPR000644 CBS domain RR42_RS11635 d4b2ed9210408cc3fab09bdd181c8114 154 PANTHER PTHR11911 1 125 3.5E-18 T 23-04-2016 RR42_RS06530 8f5bdfdc33ecbe69c573df93597ea8bd 434 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 423 2.1E-94 T 23-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RR42_RS06530 8f5bdfdc33ecbe69c573df93597ea8bd 434 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 19 429 7.7E-101 T 23-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 RR42_RS06530 8f5bdfdc33ecbe69c573df93597ea8bd 434 PIRSF PIRSF006066 3 434 9.6E-119 T 23-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 RR42_RS06530 8f5bdfdc33ecbe69c573df93597ea8bd 434 PANTHER PTHR33362 3 433 1.6E-94 T 23-04-2016 RR42_RS06530 8f5bdfdc33ecbe69c573df93597ea8bd 434 PANTHER PTHR33362:SF2 3 433 1.6E-94 T 23-04-2016 RR42_RS12080 125e66e168a879251af5f0fad8db2ac4 238 SUPERFAMILY SSF52266 19 229 1.68E-18 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain RR42_RS12080 125e66e168a879251af5f0fad8db2ac4 238 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 27 216 4.8E-9 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain RR42_RS12080 125e66e168a879251af5f0fad8db2ac4 238 Gene3D G3DSA:3.40.50.1110 20 231 6.7E-45 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain RR42_RS14040 69745818b8989830f8b8755a5c954dbb 256 Gene3D G3DSA:3.30.160.20 150 219 3.4E-24 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain RR42_RS14040 69745818b8989830f8b8755a5c954dbb 256 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 6 219 1.5E-71 T 23-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 RR42_RS14040 69745818b8989830f8b8755a5c954dbb 256 SMART SM00358 153 221 1.5E-15 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain RR42_RS14040 69745818b8989830f8b8755a5c954dbb 256 Pfam PF00035 Double-stranded RNA binding motif 153 218 9.5E-11 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain RR42_RS14040 69745818b8989830f8b8755a5c954dbb 256 SUPERFAMILY SSF54768 106 225 1.05E-25 T 23-04-2016 RR42_RS14040 69745818b8989830f8b8755a5c954dbb 256 Pfam PF14622 Ribonuclease-III-like 17 138 1.1E-35 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RR42_RS14040 69745818b8989830f8b8755a5c954dbb 256 SMART SM00535 18 146 9.2E-48 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RR42_RS14040 69745818b8989830f8b8755a5c954dbb 256 ProSitePatterns PS00517 Ribonuclease III family signature. 35 43 - T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RR42_RS14040 69745818b8989830f8b8755a5c954dbb 256 Gene3D G3DSA:1.10.1520.10 2 145 2.2E-48 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RR42_RS14040 69745818b8989830f8b8755a5c954dbb 256 Hamap MF_00104 Ribonuclease 3 [rnc]. 6 217 29.09 T 23-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 RR42_RS14040 69745818b8989830f8b8755a5c954dbb 256 SUPERFAMILY SSF69065 2 154 5.93E-47 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RR42_RS14040 69745818b8989830f8b8755a5c954dbb 256 PANTHER PTHR11207 3 218 1.1E-77 T 23-04-2016 RR42_RS27995 776275ae2fe6c2fe3618768cbf3706f3 96 PANTHER PTHR10342:SF199 15 90 5.8E-28 T 23-04-2016 RR42_RS27995 776275ae2fe6c2fe3618768cbf3706f3 96 Gene3D G3DSA:3.40.720.10 22 94 5.6E-29 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RR42_RS27995 776275ae2fe6c2fe3618768cbf3706f3 96 Pfam PF00884 Sulfatase 25 91 4.9E-18 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RR42_RS27995 776275ae2fe6c2fe3618768cbf3706f3 96 SUPERFAMILY SSF53649 21 94 1.18E-27 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RR42_RS27995 776275ae2fe6c2fe3618768cbf3706f3 96 PANTHER PTHR10342 15 90 5.8E-28 T 23-04-2016 RR42_RS14835 847d4c424bb1305104a05806f7cef23f 548 PANTHER PTHR13707:SF38 1 541 1.8E-165 T 23-04-2016 RR42_RS14835 847d4c424bb1305104a05806f7cef23f 548 PANTHER PTHR13707 1 541 1.8E-165 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RR42_RS14835 847d4c424bb1305104a05806f7cef23f 548 SMART SM00882 3 252 3.6E-51 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RR42_RS14835 847d4c424bb1305104a05806f7cef23f 548 Pfam PF01144 Coenzyme A transferase 5 251 4.6E-21 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RR42_RS14835 847d4c424bb1305104a05806f7cef23f 548 SUPERFAMILY SSF100950 298 545 1.53E-60 T 23-04-2016 RR42_RS14835 847d4c424bb1305104a05806f7cef23f 548 SUPERFAMILY SSF100950 2 262 2.51E-70 T 23-04-2016 RR42_RS14835 847d4c424bb1305104a05806f7cef23f 548 Gene3D G3DSA:3.40.810.20 298 541 1.6E-49 T 23-04-2016 RR42_RS14835 847d4c424bb1305104a05806f7cef23f 548 PIRSF PIRSF000858 1 548 3.4E-192 T 23-04-2016 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 RR42_RS14835 847d4c424bb1305104a05806f7cef23f 548 Gene3D G3DSA:3.40.1080.10 2 251 4.6E-57 T 23-04-2016 RR42_RS14105 ad694f7e7870c4daaa55888acdffeb5f 311 Gene3D G3DSA:3.40.366.10 2 120 5.1E-66 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RR42_RS14105 ad694f7e7870c4daaa55888acdffeb5f 311 Gene3D G3DSA:3.40.366.10 197 289 5.1E-66 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RR42_RS14105 ad694f7e7870c4daaa55888acdffeb5f 311 SUPERFAMILY SSF55048 126 197 8.37E-16 T 23-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 RR42_RS14105 ad694f7e7870c4daaa55888acdffeb5f 311 PIRSF PIRSF000446 1 311 2.8E-104 T 23-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 RR42_RS14105 ad694f7e7870c4daaa55888acdffeb5f 311 Pfam PF00698 Acyl transferase domain 5 281 9.6E-33 T 23-04-2016 IPR014043 Acyl transferase RR42_RS14105 ad694f7e7870c4daaa55888acdffeb5f 311 PANTHER PTHR10982 1 307 1.8E-126 T 23-04-2016 RR42_RS14105 ad694f7e7870c4daaa55888acdffeb5f 311 Gene3D G3DSA:3.30.70.250 123 196 8.2E-29 T 23-04-2016 RR42_RS14105 ad694f7e7870c4daaa55888acdffeb5f 311 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 306 9.3E-33 T 23-04-2016 IPR020801 Polyketide synthase, acyl transferase domain RR42_RS14105 ad694f7e7870c4daaa55888acdffeb5f 311 SUPERFAMILY SSF52151 2 126 5.06E-69 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RR42_RS14105 ad694f7e7870c4daaa55888acdffeb5f 311 SUPERFAMILY SSF52151 198 291 5.06E-69 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RR42_RS14105 ad694f7e7870c4daaa55888acdffeb5f 311 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 289 1.2E-102 T 23-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 RR42_RS05895 ac165670b4c6927f2cc0535ddd0f7501 211 Gene3D G3DSA:1.20.1540.10 52 197 9.5E-8 T 23-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RR42_RS05895 ac165670b4c6927f2cc0535ddd0f7501 211 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 54 197 3.6E-35 T 23-04-2016 IPR023826 Rhomboid-like serine protease, proteobacteria RR42_RS05895 ac165670b4c6927f2cc0535ddd0f7501 211 SUPERFAMILY SSF144091 17 206 5.1E-16 T 23-04-2016 RR42_RS14360 66dd93572405ef8856a48750d7e40b35 397 SUPERFAMILY SSF53686 5 391 2.62E-152 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RR42_RS14360 66dd93572405ef8856a48750d7e40b35 397 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 4 393 52.977 T 23-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RR42_RS14360 66dd93572405ef8856a48750d7e40b35 397 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 83 97 - T 23-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RR42_RS14360 66dd93572405ef8856a48750d7e40b35 397 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 56 380 2.1E-48 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RR42_RS14360 66dd93572405ef8856a48750d7e40b35 397 PIRSF PIRSF001413 1 396 2.2E-165 T 23-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RR42_RS14360 66dd93572405ef8856a48750d7e40b35 397 Gene3D G3DSA:3.40.50.1100 180 394 1.7E-99 T 23-04-2016 RR42_RS14360 66dd93572405ef8856a48750d7e40b35 397 Gene3D G3DSA:3.40.50.1100 100 179 6.4E-23 T 23-04-2016 RR42_RS14360 66dd93572405ef8856a48750d7e40b35 397 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 9 392 1.8E-193 T 23-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RR42_RS14360 66dd93572405ef8856a48750d7e40b35 397 PANTHER PTHR10314:SF3 9 393 4.8E-236 T 23-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RR42_RS14360 66dd93572405ef8856a48750d7e40b35 397 PANTHER PTHR10314 9 393 4.8E-236 T 23-04-2016 RR42_RS01295 03bc06c472dbaacf121c4bef954698db 392 SUPERFAMILY SSF51971 301 359 8.24E-23 T 23-04-2016 RR42_RS01295 03bc06c472dbaacf121c4bef954698db 392 SUPERFAMILY SSF51971 1 238 8.24E-23 T 23-04-2016 RR42_RS01295 03bc06c472dbaacf121c4bef954698db 392 Gene3D G3DSA:3.50.50.60 3 88 6.4E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS01295 03bc06c472dbaacf121c4bef954698db 392 Gene3D G3DSA:3.50.50.60 316 355 6.4E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS01295 03bc06c472dbaacf121c4bef954698db 392 Gene3D G3DSA:3.50.50.60 148 207 6.4E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS01295 03bc06c472dbaacf121c4bef954698db 392 Pfam PF01266 FAD dependent oxidoreductase 7 349 6.7E-32 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RR42_RS01295 03bc06c472dbaacf121c4bef954698db 392 SUPERFAMILY SSF54373 225 315 2.75E-18 T 23-04-2016 RR42_RS01295 03bc06c472dbaacf121c4bef954698db 392 Gene3D G3DSA:3.30.9.10 208 315 2.9E-17 T 23-04-2016 RR42_RS19300 38fb032b38ed0b634bf828c62662eefc 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.217 T 23-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 RR42_RS19300 38fb032b38ed0b634bf828c62662eefc 156 Gene3D G3DSA:1.10.455.10 7 156 8.5E-65 T 23-04-2016 IPR023798 Ribosomal protein S7 domain RR42_RS19300 38fb032b38ed0b634bf828c62662eefc 156 PIRSF PIRSF002122 3 156 6.7E-60 T 23-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 RR42_RS19300 38fb032b38ed0b634bf828c62662eefc 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 5.9E-65 T 23-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 RR42_RS19300 38fb032b38ed0b634bf828c62662eefc 156 PANTHER PTHR11205 1 156 4.0E-85 T 23-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 RR42_RS19300 38fb032b38ed0b634bf828c62662eefc 156 SUPERFAMILY SSF47973 2 149 2.75E-61 T 23-04-2016 IPR023798 Ribosomal protein S7 domain RR42_RS19300 38fb032b38ed0b634bf828c62662eefc 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 23-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 RR42_RS19300 38fb032b38ed0b634bf828c62662eefc 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 3.1E-66 T 23-04-2016 IPR023798 Ribosomal protein S7 domain RR42_RS02865 e4b1fefa2a95addeebd748ba2f81d51d 562 PRINTS PR00762 Chloride channel signature 331 351 5.3E-17 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RR42_RS02865 e4b1fefa2a95addeebd748ba2f81d51d 562 PRINTS PR00762 Chloride channel signature 110 129 5.3E-17 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RR42_RS02865 e4b1fefa2a95addeebd748ba2f81d51d 562 PRINTS PR00762 Chloride channel signature 379 398 5.3E-17 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RR42_RS02865 e4b1fefa2a95addeebd748ba2f81d51d 562 PRINTS PR00762 Chloride channel signature 166 185 5.3E-17 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RR42_RS02865 e4b1fefa2a95addeebd748ba2f81d51d 562 PRINTS PR00762 Chloride channel signature 361 377 5.3E-17 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RR42_RS02865 e4b1fefa2a95addeebd748ba2f81d51d 562 SUPERFAMILY SSF54631 450 558 1.0E-12 T 23-04-2016 RR42_RS02865 e4b1fefa2a95addeebd748ba2f81d51d 562 SMART SM00116 509 559 0.57 T 23-04-2016 IPR000644 CBS domain RR42_RS02865 e4b1fefa2a95addeebd748ba2f81d51d 562 SMART SM00116 449 495 9.9 T 23-04-2016 IPR000644 CBS domain RR42_RS02865 e4b1fefa2a95addeebd748ba2f81d51d 562 Pfam PF00571 CBS domain 505 557 1.5E-5 T 23-04-2016 IPR000644 CBS domain RR42_RS02865 e4b1fefa2a95addeebd748ba2f81d51d 562 Gene3D G3DSA:3.10.580.10 450 556 1.5E-11 T 23-04-2016 RR42_RS02865 e4b1fefa2a95addeebd748ba2f81d51d 562 PANTHER PTHR11689 53 557 6.7E-48 T 23-04-2016 RR42_RS02865 e4b1fefa2a95addeebd748ba2f81d51d 562 PANTHER PTHR11689 4 9 6.7E-48 T 23-04-2016 RR42_RS02865 e4b1fefa2a95addeebd748ba2f81d51d 562 SUPERFAMILY SSF81340 3 426 4.97E-81 T 23-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 RR42_RS02865 e4b1fefa2a95addeebd748ba2f81d51d 562 Pfam PF00654 Voltage gated chloride channel 67 411 3.2E-72 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RR42_RS02865 e4b1fefa2a95addeebd748ba2f81d51d 562 PANTHER PTHR11689:SF14 53 557 6.7E-48 T 23-04-2016 RR42_RS02865 e4b1fefa2a95addeebd748ba2f81d51d 562 PANTHER PTHR11689:SF14 4 9 6.7E-48 T 23-04-2016 RR42_RS02865 e4b1fefa2a95addeebd748ba2f81d51d 562 Gene3D G3DSA:1.10.3080.10 10 429 6.6E-65 T 23-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 RR42_RS01575 0602819a8a0d540dbafc39a5b28084ab 443 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 252 289 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RR42_RS01575 0602819a8a0d540dbafc39a5b28084ab 443 PANTHER PTHR11986:SF80 1 443 3.6E-235 T 23-04-2016 RR42_RS01575 0602819a8a0d540dbafc39a5b28084ab 443 Pfam PF00202 Aminotransferase class-III 21 439 1.1E-105 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RR42_RS01575 0602819a8a0d540dbafc39a5b28084ab 443 PANTHER PTHR11986 1 443 3.6E-235 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RR42_RS01575 0602819a8a0d540dbafc39a5b28084ab 443 Gene3D G3DSA:3.90.1150.10 345 442 6.7E-45 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS01575 0602819a8a0d540dbafc39a5b28084ab 443 Gene3D G3DSA:3.90.1150.10 10 63 6.7E-45 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS01575 0602819a8a0d540dbafc39a5b28084ab 443 Gene3D G3DSA:3.40.640.10 65 344 1.7E-80 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS01575 0602819a8a0d540dbafc39a5b28084ab 443 SUPERFAMILY SSF53383 8 442 2.66E-120 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS11875 d89bbe346848701471718f31b2932877 247 Pfam PF00318 Ribosomal protein S2 8 223 7.4E-91 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS11875 d89bbe346848701471718f31b2932877 247 Gene3D G3DSA:1.10.287.610 99 151 2.0E-22 T 23-04-2016 RR42_RS11875 d89bbe346848701471718f31b2932877 247 SUPERFAMILY SSF52313 5 230 1.7E-89 T 23-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain RR42_RS11875 d89bbe346848701471718f31b2932877 247 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 224 39.757 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 RR42_RS11875 d89bbe346848701471718f31b2932877 247 PANTHER PTHR12534 3 229 3.2E-106 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 RR42_RS11875 d89bbe346848701471718f31b2932877 247 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 225 1.3E-97 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 RR42_RS11875 d89bbe346848701471718f31b2932877 247 PRINTS PR00395 Ribosomal protein S2 signature 157 174 4.6E-34 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS11875 d89bbe346848701471718f31b2932877 247 PRINTS PR00395 Ribosomal protein S2 signature 86 103 4.6E-34 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS11875 d89bbe346848701471718f31b2932877 247 PRINTS PR00395 Ribosomal protein S2 signature 5 23 4.6E-34 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS11875 d89bbe346848701471718f31b2932877 247 PRINTS PR00395 Ribosomal protein S2 signature 195 209 4.6E-34 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS11875 d89bbe346848701471718f31b2932877 247 PRINTS PR00395 Ribosomal protein S2 signature 174 185 4.6E-34 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS11875 d89bbe346848701471718f31b2932877 247 PRINTS PR00395 Ribosomal protein S2 signature 36 45 4.6E-34 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS11875 d89bbe346848701471718f31b2932877 247 Gene3D G3DSA:3.40.50.10490 22 98 1.1E-59 T 23-04-2016 RR42_RS11875 d89bbe346848701471718f31b2932877 247 Gene3D G3DSA:3.40.50.10490 157 231 1.1E-59 T 23-04-2016 RR42_RS09765 ec5f89484b5ca06ced5791854bdbd555 221 PANTHER PTHR31299 1 207 2.1E-56 T 23-04-2016 RR42_RS09765 ec5f89484b5ca06ced5791854bdbd555 221 Gene3D G3DSA:3.40.50.2020 1 202 7.0E-38 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS09765 ec5f89484b5ca06ced5791854bdbd555 221 Pfam PF00156 Phosphoribosyl transferase domain 6 190 2.9E-35 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RR42_RS09765 ec5f89484b5ca06ced5791854bdbd555 221 SUPERFAMILY SSF53271 1 205 1.12E-48 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS04645 441946e0a6ed0c4dc46ea659e188ca51 285 SUPERFAMILY SSF52821 96 233 1.18E-24 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS04645 441946e0a6ed0c4dc46ea659e188ca51 285 Pfam PF00581 Rhodanese-like domain 119 213 1.7E-4 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS04645 441946e0a6ed0c4dc46ea659e188ca51 285 Hamap MF_00469 UPF0176 protein YceA [yceA]. 1 257 36.8 T 23-04-2016 IPR020936 Uncharacterised protein family UPF0176 RR42_RS04645 441946e0a6ed0c4dc46ea659e188ca51 285 Gene3D G3DSA:3.30.70.100 21 73 5.8E-4 T 23-04-2016 RR42_RS04645 441946e0a6ed0c4dc46ea659e188ca51 285 PANTHER PTHR22778:SF21 2 263 3.4E-69 T 23-04-2016 RR42_RS04645 441946e0a6ed0c4dc46ea659e188ca51 285 PANTHER PTHR22778 2 263 3.4E-69 T 23-04-2016 RR42_RS04645 441946e0a6ed0c4dc46ea659e188ca51 285 SMART SM00450 118 219 3.9E-9 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS04645 441946e0a6ed0c4dc46ea659e188ca51 285 Gene3D G3DSA:3.40.250.10 104 229 1.0E-28 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS24400 d7a9eafe942b2a9bc50911e5aa9beef8 125 SUPERFAMILY SSF52833 12 125 6.18E-15 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS24400 d7a9eafe942b2a9bc50911e5aa9beef8 125 PANTHER PTHR32419 1 125 2.4E-66 T 23-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 RR42_RS24400 d7a9eafe942b2a9bc50911e5aa9beef8 125 Gene3D G3DSA:3.40.30.10 11 125 1.7E-16 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS24400 d7a9eafe942b2a9bc50911e5aa9beef8 125 Pfam PF13409 Glutathione S-transferase, N-terminal domain 33 125 4.0E-22 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RR42_RS08830 d0cf107751fe66c03588a38158827401 429 Gene3D G3DSA:1.20.1250.20 215 408 9.4E-20 T 23-04-2016 RR42_RS08830 d0cf107751fe66c03588a38158827401 429 PANTHER PTHR23515 24 410 5.2E-72 T 23-04-2016 RR42_RS08830 d0cf107751fe66c03588a38158827401 429 SUPERFAMILY SSF103473 9 411 1.57E-59 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS08830 d0cf107751fe66c03588a38158827401 429 Pfam PF07690 Major Facilitator Superfamily 27 377 1.1E-37 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS08830 d0cf107751fe66c03588a38158827401 429 Gene3D G3DSA:1.20.1250.20 17 205 2.4E-25 T 23-04-2016 RR42_RS02330 12dd0898f276b8c836e6b576e6ef3b77 466 SUPERFAMILY SSF53756 3 458 2.57E-148 T 23-04-2016 RR42_RS02330 12dd0898f276b8c836e6b576e6ef3b77 466 PANTHER PTHR10788:SF6 3 460 6.1E-161 T 23-04-2016 RR42_RS02330 12dd0898f276b8c836e6b576e6ef3b77 466 Gene3D G3DSA:3.40.50.2000 245 442 2.7E-75 T 23-04-2016 RR42_RS02330 12dd0898f276b8c836e6b576e6ef3b77 466 Pfam PF00982 Glycosyltransferase family 20 18 456 4.7E-125 T 23-04-2016 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 RR42_RS02330 12dd0898f276b8c836e6b576e6ef3b77 466 PANTHER PTHR10788 3 460 6.1E-161 T 23-04-2016 RR42_RS02330 12dd0898f276b8c836e6b576e6ef3b77 466 Gene3D G3DSA:3.40.50.2000 2 244 2.0E-65 T 23-04-2016 RR42_RS01165 bc10b2b3b7d25bbc8b7cb1e7cf9fe947 203 SUPERFAMILY SSF53335 13 187 2.79E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS01165 bc10b2b3b7d25bbc8b7cb1e7cf9fe947 203 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 13 200 3.2E-86 T 23-04-2016 IPR010743 Methionine biosynthesis MetW RR42_RS01165 bc10b2b3b7d25bbc8b7cb1e7cf9fe947 203 Gene3D G3DSA:3.40.50.150 18 184 8.9E-27 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS01165 bc10b2b3b7d25bbc8b7cb1e7cf9fe947 203 PANTHER PTHR10108 9 176 3.2E-50 T 23-04-2016 RR42_RS01165 bc10b2b3b7d25bbc8b7cb1e7cf9fe947 203 Pfam PF07021 Methionine biosynthesis protein MetW 13 200 5.2E-85 T 23-04-2016 IPR010743 Methionine biosynthesis MetW RR42_RS01165 bc10b2b3b7d25bbc8b7cb1e7cf9fe947 203 PANTHER PTHR10108:SF831 9 176 3.2E-50 T 23-04-2016 RR42_RS12505 2f5be9135e76d7543d2d9e0bd4a6f9f2 201 SUPERFAMILY SSF46689 11 89 4.57E-20 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS12505 2f5be9135e76d7543d2d9e0bd4a6f9f2 201 PANTHER PTHR30055 6 194 3.9E-31 T 23-04-2016 RR42_RS12505 2f5be9135e76d7543d2d9e0bd4a6f9f2 201 Gene3D G3DSA:1.10.357.10 10 200 4.2E-45 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS12505 2f5be9135e76d7543d2d9e0bd4a6f9f2 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 69 1.1E-14 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS12505 2f5be9135e76d7543d2d9e0bd4a6f9f2 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 1.0E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS12505 2f5be9135e76d7543d2d9e0bd4a6f9f2 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 1.0E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS12505 2f5be9135e76d7543d2d9e0bd4a6f9f2 201 ProSitePatterns PS01081 TetR-type HTH domain signature. 35 65 - T 23-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RR42_RS12505 2f5be9135e76d7543d2d9e0bd4a6f9f2 201 SUPERFAMILY SSF48498 99 200 5.01E-12 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RR42_RS10355 152b11899d7f9cd68c89c48577eee1c0 156 PANTHER PTHR30154:SF28 1 154 8.6E-54 T 23-04-2016 RR42_RS10355 152b11899d7f9cd68c89c48577eee1c0 156 PANTHER PTHR30154 1 154 8.6E-54 T 23-04-2016 RR42_RS10355 152b11899d7f9cd68c89c48577eee1c0 156 SUPERFAMILY SSF54909 63 152 1.01E-21 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RR42_RS10355 152b11899d7f9cd68c89c48577eee1c0 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 49 3.9E-16 T 23-04-2016 RR42_RS10355 152b11899d7f9cd68c89c48577eee1c0 156 Gene3D G3DSA:1.10.10.10 4 54 3.7E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS10355 152b11899d7f9cd68c89c48577eee1c0 156 Gene3D G3DSA:3.30.70.920 56 152 1.0E-27 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RR42_RS10355 152b11899d7f9cd68c89c48577eee1c0 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 2.4E-14 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS10355 152b11899d7f9cd68c89c48577eee1c0 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 2.4E-14 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS10355 152b11899d7f9cd68c89c48577eee1c0 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 2.4E-14 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS10355 152b11899d7f9cd68c89c48577eee1c0 156 SUPERFAMILY SSF46785 3 63 6.92E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS10355 152b11899d7f9cd68c89c48577eee1c0 156 SMART SM00344 3 112 4.4E-40 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RR42_RS10355 152b11899d7f9cd68c89c48577eee1c0 156 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 6.6E-23 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RR42_RS17800 20d7c65131a313294bdb34a7b8cd7698 469 Gene3D G3DSA:3.30.390.30 337 456 2.0E-31 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RR42_RS17800 20d7c65131a313294bdb34a7b8cd7698 469 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 454 1.1E-22 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RR42_RS17800 20d7c65131a313294bdb34a7b8cd7698 469 PIRSF PIRSF000350 1 450 1.8E-85 T 23-04-2016 RR42_RS17800 20d7c65131a313294bdb34a7b8cd7698 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 288 310 4.2E-27 T 23-04-2016 RR42_RS17800 20d7c65131a313294bdb34a7b8cd7698 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 133 151 4.2E-27 T 23-04-2016 RR42_RS17800 20d7c65131a313294bdb34a7b8cd7698 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 275 4.2E-27 T 23-04-2016 RR42_RS17800 20d7c65131a313294bdb34a7b8cd7698 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 4.2E-27 T 23-04-2016 RR42_RS17800 20d7c65131a313294bdb34a7b8cd7698 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.2E-27 T 23-04-2016 RR42_RS17800 20d7c65131a313294bdb34a7b8cd7698 469 PANTHER PTHR22912 1 459 1.1E-174 T 23-04-2016 RR42_RS17800 20d7c65131a313294bdb34a7b8cd7698 469 PANTHER PTHR22912:SF145 1 459 1.1E-174 T 23-04-2016 RR42_RS17800 20d7c65131a313294bdb34a7b8cd7698 469 SUPERFAMILY SSF55424 348 456 5.5E-31 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RR42_RS17800 20d7c65131a313294bdb34a7b8cd7698 469 Gene3D G3DSA:3.50.50.60 257 336 1.9E-22 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS17800 20d7c65131a313294bdb34a7b8cd7698 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 260 274 9.2E-44 T 23-04-2016 RR42_RS17800 20d7c65131a313294bdb34a7b8cd7698 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 303 310 9.2E-44 T 23-04-2016 RR42_RS17800 20d7c65131a313294bdb34a7b8cd7698 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 9.2E-44 T 23-04-2016 RR42_RS17800 20d7c65131a313294bdb34a7b8cd7698 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 9.2E-44 T 23-04-2016 RR42_RS17800 20d7c65131a313294bdb34a7b8cd7698 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 9.2E-44 T 23-04-2016 RR42_RS17800 20d7c65131a313294bdb34a7b8cd7698 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 9.2E-44 T 23-04-2016 RR42_RS17800 20d7c65131a313294bdb34a7b8cd7698 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 9.2E-44 T 23-04-2016 RR42_RS17800 20d7c65131a313294bdb34a7b8cd7698 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 9.2E-44 T 23-04-2016 RR42_RS17800 20d7c65131a313294bdb34a7b8cd7698 469 SUPERFAMILY SSF51905 1 333 6.74E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS17800 20d7c65131a313294bdb34a7b8cd7698 469 Gene3D G3DSA:3.50.50.60 4 152 1.5E-31 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS17800 20d7c65131a313294bdb34a7b8cd7698 469 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RR42_RS17800 20d7c65131a313294bdb34a7b8cd7698 469 Gene3D G3DSA:3.50.50.60 153 256 1.4E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS17800 20d7c65131a313294bdb34a7b8cd7698 469 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 320 2.5E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS19975 5458d06448687f2ac2b61a4e9291715e 265 SUPERFAMILY SSF52540 13 237 1.82E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS19975 5458d06448687f2ac2b61a4e9291715e 265 SMART SM00382 41 221 4.0E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS19975 5458d06448687f2ac2b61a4e9291715e 265 PANTHER PTHR24220 13 219 2.1E-87 T 23-04-2016 RR42_RS19975 5458d06448687f2ac2b61a4e9291715e 265 Pfam PF00005 ABC transporter 32 171 8.5E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS19975 5458d06448687f2ac2b61a4e9291715e 265 Gene3D G3DSA:3.40.50.300 9 218 1.3E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS19975 5458d06448687f2ac2b61a4e9291715e 265 PANTHER PTHR24220:SF561 13 219 2.1E-87 T 23-04-2016 RR42_RS19975 5458d06448687f2ac2b61a4e9291715e 265 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS18260 8d4e6acc903fd09629ab51596ffa35b1 148 Gene3D G3DSA:3.10.129.10 6 140 1.1E-47 T 23-04-2016 IPR029069 HotDog domain RR42_RS18260 8d4e6acc903fd09629ab51596ffa35b1 148 PANTHER PTHR12418:SF24 16 131 3.2E-41 T 23-04-2016 RR42_RS18260 8d4e6acc903fd09629ab51596ffa35b1 148 TIGRFAM TIGR02286 PaaD: phenylacetic acid degradation protein PaaD 24 135 2.8E-44 T 23-04-2016 IPR011973 Phenylacetic acid degradation protein PaaD GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- RR42_RS18260 8d4e6acc903fd09629ab51596ffa35b1 148 SUPERFAMILY SSF54637 13 132 3.25E-31 T 23-04-2016 IPR029069 HotDog domain RR42_RS18260 8d4e6acc903fd09629ab51596ffa35b1 148 Pfam PF03061 Thioesterase superfamily 52 124 1.6E-13 T 23-04-2016 IPR006683 Thioesterase domain RR42_RS18260 8d4e6acc903fd09629ab51596ffa35b1 148 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 22 134 1.5E-26 T 23-04-2016 IPR003736 Phenylacetic acid degradation-related domain RR42_RS18260 8d4e6acc903fd09629ab51596ffa35b1 148 PANTHER PTHR12418 16 131 3.2E-41 T 23-04-2016 RR42_RS16765 992a0e8e81efd12e3ae155740e646220 507 SUPERFAMILY SSF53067 254 498 2.21E-47 T 23-04-2016 RR42_RS16765 992a0e8e81efd12e3ae155740e646220 507 PIRSF PIRSF000538 5 505 3.2E-95 T 23-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RR42_RS16765 992a0e8e81efd12e3ae155740e646220 507 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 252 1.5E-33 T 23-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RR42_RS16765 992a0e8e81efd12e3ae155740e646220 507 Gene3D G3DSA:3.30.420.40 254 494 1.1E-57 T 23-04-2016 RR42_RS16765 992a0e8e81efd12e3ae155740e646220 507 SUPERFAMILY SSF53067 7 255 6.83E-53 T 23-04-2016 RR42_RS16765 992a0e8e81efd12e3ae155740e646220 507 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 365 385 - T 23-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RR42_RS16765 992a0e8e81efd12e3ae155740e646220 507 PANTHER PTHR10196 3 495 1.5E-94 T 23-04-2016 RR42_RS16765 992a0e8e81efd12e3ae155740e646220 507 Gene3D G3DSA:3.30.420.40 3 252 8.0E-54 T 23-04-2016 RR42_RS16765 992a0e8e81efd12e3ae155740e646220 507 PANTHER PTHR10196:SF9 3 495 1.5E-94 T 23-04-2016 RR42_RS16765 992a0e8e81efd12e3ae155740e646220 507 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 452 3.4E-35 T 23-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RR42_RS14420 d504660a54fa5a57a3e6697ee784288c 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 292 3.3E-53 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RR42_RS14420 d504660a54fa5a57a3e6697ee784288c 308 PANTHER PTHR11795 7 308 2.0E-131 T 23-04-2016 RR42_RS14420 d504660a54fa5a57a3e6697ee784288c 308 PANTHER PTHR11795:SF371 7 308 2.0E-131 T 23-04-2016 RR42_RS02925 5d0ef9ab5a6b3266e4e0fcda97f8ca27 303 SUPERFAMILY SSF103481 47 143 1.96E-16 T 23-04-2016 RR42_RS02925 5d0ef9ab5a6b3266e4e0fcda97f8ca27 303 PANTHER PTHR12715 13 291 2.2E-36 T 23-04-2016 RR42_RS02925 5d0ef9ab5a6b3266e4e0fcda97f8ca27 303 SUPERFAMILY SSF103481 190 293 1.7E-8 T 23-04-2016 RR42_RS02925 5d0ef9ab5a6b3266e4e0fcda97f8ca27 303 Pfam PF00892 EamA-like transporter family 14 141 1.2E-24 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS02925 5d0ef9ab5a6b3266e4e0fcda97f8ca27 303 Pfam PF00892 EamA-like transporter family 155 287 3.8E-9 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS07910 dfdc6b2e983cb2c637099b6194059d07 398 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 91 304 1.9E-24 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RR42_RS07910 dfdc6b2e983cb2c637099b6194059d07 398 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 76 386 2.2E-73 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RR42_RS07910 dfdc6b2e983cb2c637099b6194059d07 398 PANTHER PTHR30469 17 397 8.9E-77 T 23-04-2016 RR42_RS07910 dfdc6b2e983cb2c637099b6194059d07 398 Gene3D G3DSA:2.40.50.100 95 123 2.2E-13 T 23-04-2016 RR42_RS07910 dfdc6b2e983cb2c637099b6194059d07 398 Gene3D G3DSA:2.40.50.100 198 229 2.2E-13 T 23-04-2016 RR42_RS07910 dfdc6b2e983cb2c637099b6194059d07 398 SUPERFAMILY SSF111369 78 307 6.8E-23 T 23-04-2016 RR42_RS11695 574a83f5f30c48bfe751b7a4977fc315 218 PANTHER PTHR23026:SF112 28 211 8.0E-54 T 23-04-2016 RR42_RS11695 574a83f5f30c48bfe751b7a4977fc315 218 Pfam PF00881 Nitroreductase family 47 210 1.6E-22 T 23-04-2016 IPR029479 Nitroreductase RR42_RS11695 574a83f5f30c48bfe751b7a4977fc315 218 PANTHER PTHR23026 28 211 8.0E-54 T 23-04-2016 RR42_RS11695 574a83f5f30c48bfe751b7a4977fc315 218 Gene3D G3DSA:3.40.109.10 40 212 4.6E-28 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 RR42_RS11695 574a83f5f30c48bfe751b7a4977fc315 218 SUPERFAMILY SSF55469 41 212 7.98E-29 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 RR42_RS03170 309ededfad12032f77f692bff2f853f8 64 Pfam PF10276 Zinc-finger domain 29 52 3.5E-9 T 23-04-2016 IPR019401 Zinc finger, CHCC-type RR42_RS03170 309ededfad12032f77f692bff2f853f8 64 Gene3D G3DSA:2.60.260.40 4 62 2.1E-20 T 23-04-2016 IPR019401 Zinc finger, CHCC-type RR42_RS05535 13ed6026ce880dce44358de33f7e322f 431 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 20 420 1.6E-192 T 23-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 RR42_RS05535 13ed6026ce880dce44358de33f7e322f 431 Pfam PF10531 SLBB domain 248 296 2.3E-12 T 23-04-2016 IPR019554 Soluble ligand binding domain RR42_RS05535 13ed6026ce880dce44358de33f7e322f 431 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 347 358 - T 23-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 RR42_RS05535 13ed6026ce880dce44358de33f7e322f 431 SMART SM00928 334 379 6.9E-24 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 RR42_RS05535 13ed6026ce880dce44358de33f7e322f 431 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 53 224 3.1E-46 T 23-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain RR42_RS05535 13ed6026ce880dce44358de33f7e322f 431 SUPERFAMILY SSF142019 20 244 2.48E-82 T 23-04-2016 RR42_RS05535 13ed6026ce880dce44358de33f7e322f 431 SUPERFAMILY SSF140490 331 428 4.45E-37 T 23-04-2016 RR42_RS05535 13ed6026ce880dce44358de33f7e322f 431 SUPERFAMILY SSF142984 246 329 9.94E-25 T 23-04-2016 RR42_RS05535 13ed6026ce880dce44358de33f7e322f 431 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 338 419 6.5E-30 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 RR42_RS05535 13ed6026ce880dce44358de33f7e322f 431 PANTHER PTHR11780 22 429 1.1E-215 T 23-04-2016 RR42_RS05535 13ed6026ce880dce44358de33f7e322f 431 PANTHER PTHR11780:SF10 22 429 1.1E-215 T 23-04-2016 RR42_RS12300 071bc1963441edcc8e39c108dc970b79 131 Gene3D G3DSA:2.60.120.10 38 118 1.9E-19 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS12300 071bc1963441edcc8e39c108dc970b79 131 Pfam PF07883 Cupin domain 49 117 1.6E-16 T 23-04-2016 IPR013096 Cupin 2, conserved barrel RR42_RS12300 071bc1963441edcc8e39c108dc970b79 131 PANTHER PTHR38599 40 129 4.0E-12 T 23-04-2016 RR42_RS12300 071bc1963441edcc8e39c108dc970b79 131 PANTHER PTHR38599:SF1 40 129 4.0E-12 T 23-04-2016 RR42_RS12300 071bc1963441edcc8e39c108dc970b79 131 SUPERFAMILY SSF51182 26 123 1.81E-22 T 23-04-2016 IPR011051 RmlC-like cupin domain RR42_RS18880 374f4a53e810ef9fcaf16ed5701d5859 135 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 31 105 2.8E-35 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 RR42_RS18880 374f4a53e810ef9fcaf16ed5701d5859 135 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 54 107 8.0E-25 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 RR42_RS18880 374f4a53e810ef9fcaf16ed5701d5859 135 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 5 109 31.375 T 23-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 RR42_RS18880 374f4a53e810ef9fcaf16ed5701d5859 135 PANTHER PTHR21256 1 133 3.4E-59 T 23-04-2016 RR42_RS18880 374f4a53e810ef9fcaf16ed5701d5859 135 SUPERFAMILY SSF141734 4 111 7.32E-47 T 23-04-2016 RR42_RS10775 89b9debfc6deedf26fe441ef6e95d793 434 SUPERFAMILY SSF46626 25 156 6.36E-24 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS10775 89b9debfc6deedf26fe441ef6e95d793 434 SUPERFAMILY SSF46626 181 291 2.53E-19 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS10775 89b9debfc6deedf26fe441ef6e95d793 434 Pfam PF00034 Cytochrome c 183 291 3.9E-4 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS10775 89b9debfc6deedf26fe441ef6e95d793 434 Pfam PF00034 Cytochrome c 36 134 3.6E-6 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS10775 89b9debfc6deedf26fe441ef6e95d793 434 PANTHER PTHR35008:SF3 19 412 2.3E-154 T 23-04-2016 RR42_RS10775 89b9debfc6deedf26fe441ef6e95d793 434 PANTHER PTHR35008 19 412 2.3E-154 T 23-04-2016 RR42_RS10775 89b9debfc6deedf26fe441ef6e95d793 434 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 318 401 1.3E-8 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS10775 89b9debfc6deedf26fe441ef6e95d793 434 Gene3D G3DSA:1.10.760.10 180 291 1.2E-11 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS10775 89b9debfc6deedf26fe441ef6e95d793 434 Gene3D G3DSA:1.10.760.10 33 134 2.0E-15 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS10775 89b9debfc6deedf26fe441ef6e95d793 434 SUPERFAMILY SSF46626 318 423 3.58E-21 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS10775 89b9debfc6deedf26fe441ef6e95d793 434 PIRSF PIRSF000018 3 433 1.7E-141 T 23-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 RR42_RS10775 89b9debfc6deedf26fe441ef6e95d793 434 Gene3D G3DSA:1.10.760.10 319 425 3.3E-23 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS05325 fdd5db39e9fe038698ba747284369a93 348 Gene3D G3DSA:3.20.20.140 11 337 1.1E-106 T 23-04-2016 RR42_RS05325 fdd5db39e9fe038698ba747284369a93 348 SUPERFAMILY SSF51556 9 339 1.24E-87 T 23-04-2016 IPR032466 Metal-dependent hydrolase RR42_RS05325 fdd5db39e9fe038698ba747284369a93 348 PANTHER PTHR11409:SF41 1 334 2.1E-154 T 23-04-2016 RR42_RS05325 fdd5db39e9fe038698ba747284369a93 348 PANTHER PTHR11409 1 334 2.1E-154 T 23-04-2016 RR42_RS05325 fdd5db39e9fe038698ba747284369a93 348 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 15 333 4.8E-115 T 23-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 RR42_RS05325 fdd5db39e9fe038698ba747284369a93 348 Hamap MF_01962 Adenine deaminase. 10 322 84.934 T 23-04-2016 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 RR42_RS05325 fdd5db39e9fe038698ba747284369a93 348 Pfam PF00962 Adenosine/AMP deaminase 14 330 1.6E-75 T 23-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 RR42_RS29360 5eed93bd5df598c27e51bb0f30643133 160 PANTHER PTHR22924 11 160 5.1E-37 T 23-04-2016 RR42_RS29360 5eed93bd5df598c27e51bb0f30643133 160 Gene3D G3DSA:2.40.30.10 7 37 6.9E-8 T 23-04-2016 RR42_RS29360 5eed93bd5df598c27e51bb0f30643133 160 Gene3D G3DSA:3.40.50.80 38 160 3.0E-23 T 23-04-2016 RR42_RS29360 5eed93bd5df598c27e51bb0f30643133 160 SUPERFAMILY SSF52343 29 160 1.31E-25 T 23-04-2016 RR42_RS29360 5eed93bd5df598c27e51bb0f30643133 160 Pfam PF00175 Oxidoreductase NAD-binding domain 50 156 3.6E-10 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RR42_RS29360 5eed93bd5df598c27e51bb0f30643133 160 SUPERFAMILY SSF63380 7 38 4.12E-7 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RR42_RS00555 7a9573f34d9074d15bbb2d091da3764c 255 PANTHER PTHR13696 4 253 2.2E-67 T 23-04-2016 RR42_RS00555 7a9573f34d9074d15bbb2d091da3764c 255 Pfam PF13614 AAA domain 5 183 1.3E-36 T 23-04-2016 IPR025669 AAA domain RR42_RS00555 7a9573f34d9074d15bbb2d091da3764c 255 SUPERFAMILY SSF52540 1 255 3.86E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS00555 7a9573f34d9074d15bbb2d091da3764c 255 Gene3D G3DSA:3.40.50.300 3 254 2.2E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS00555 7a9573f34d9074d15bbb2d091da3764c 255 PANTHER PTHR13696:SF66 4 253 2.2E-67 T 23-04-2016 RR42_RS06135 d39b04771f7d29559938aa88a47722a6 490 PIRSF PIRSF005522 1 490 7.0E-236 T 23-04-2016 IPR016450 Uncharacterised conserved protein UCP005522 RR42_RS06135 d39b04771f7d29559938aa88a47722a6 490 Pfam PF14403 Circularly permuted ATP-grasp type 2 91 466 1.1E-165 T 23-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 RR42_RS06135 d39b04771f7d29559938aa88a47722a6 490 PANTHER PTHR34595:SF3 27 490 6.1E-296 T 23-04-2016 RR42_RS06135 d39b04771f7d29559938aa88a47722a6 490 PANTHER PTHR34595:SF3 3 11 6.1E-296 T 23-04-2016 RR42_RS06135 d39b04771f7d29559938aa88a47722a6 490 SUPERFAMILY SSF56059 336 481 1.14E-65 T 23-04-2016 RR42_RS06135 d39b04771f7d29559938aa88a47722a6 490 SUPERFAMILY SSF56059 30 229 1.14E-65 T 23-04-2016 RR42_RS06135 d39b04771f7d29559938aa88a47722a6 490 PANTHER PTHR34595 27 490 6.1E-296 T 23-04-2016 RR42_RS06135 d39b04771f7d29559938aa88a47722a6 490 PANTHER PTHR34595 3 11 6.1E-296 T 23-04-2016 RR42_RS10640 c0300443d8ca398c1ae4ef01bec203de 371 Gene3D G3DSA:3.40.50.1770 199 359 1.6E-30 T 23-04-2016 RR42_RS10640 c0300443d8ca398c1ae4ef01bec203de 371 SMART SM01002 149 297 9.5E-87 T 23-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RR42_RS10640 c0300443d8ca398c1ae4ef01bec203de 371 SUPERFAMILY SSF51735 137 303 4.8E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10640 c0300443d8ca398c1ae4ef01bec203de 371 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 4.6E-80 T 23-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RR42_RS10640 c0300443d8ca398c1ae4ef01bec203de 371 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 23-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 RR42_RS10640 c0300443d8ca398c1ae4ef01bec203de 371 Gene3D G3DSA:3.40.50.1770 1 175 6.3E-55 T 23-04-2016 RR42_RS10640 c0300443d8ca398c1ae4ef01bec203de 371 Gene3D G3DSA:3.50.50.60 176 198 2.5E-7 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS10640 c0300443d8ca398c1ae4ef01bec203de 371 SUPERFAMILY SSF52283 305 360 5.7E-63 T 23-04-2016 RR42_RS10640 c0300443d8ca398c1ae4ef01bec203de 371 SUPERFAMILY SSF52283 1 137 5.7E-63 T 23-04-2016 RR42_RS10640 c0300443d8ca398c1ae4ef01bec203de 371 PANTHER PTHR10160 1 371 1.7E-194 T 23-04-2016 RR42_RS10640 c0300443d8ca398c1ae4ef01bec203de 371 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 2.0E-43 T 23-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RR42_RS10640 c0300443d8ca398c1ae4ef01bec203de 371 PIRSF PIRSF000183 1 371 3.0E-151 T 23-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 RR42_RS10640 c0300443d8ca398c1ae4ef01bec203de 371 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 1.7E-154 T 23-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 RR42_RS10640 c0300443d8ca398c1ae4ef01bec203de 371 SMART SM01003 4 137 1.8E-73 T 23-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RR42_RS16085 7ad965701d0c4bca572d963bfeacc6f4 336 Pfam PF03186 CobD/Cbib protein 29 313 9.7E-89 T 23-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 RR42_RS16085 7ad965701d0c4bca572d963bfeacc6f4 336 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 335 100.954 T 23-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 RR42_RS16085 7ad965701d0c4bca572d963bfeacc6f4 336 PANTHER PTHR34308:SF1 16 322 1.2E-95 T 23-04-2016 RR42_RS16085 7ad965701d0c4bca572d963bfeacc6f4 336 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 30 293 1.7E-54 T 23-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 RR42_RS16085 7ad965701d0c4bca572d963bfeacc6f4 336 PANTHER PTHR34308 16 322 1.2E-95 T 23-04-2016 RR42_RS18190 408657f6f4615ea4aa9c9425550058fb 354 SMART SM00382 72 264 3.6E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS18190 408657f6f4615ea4aa9c9425550058fb 354 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 266 330 7.6E-19 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RR42_RS18190 408657f6f4615ea4aa9c9425550058fb 354 ProSitePatterns PS00211 ABC transporters family signature. 187 201 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS18190 408657f6f4615ea4aa9c9425550058fb 354 Pfam PF00005 ABC transporter 64 214 2.1E-26 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS18190 408657f6f4615ea4aa9c9425550058fb 354 Gene3D G3DSA:3.40.50.300 26 287 8.4E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18190 408657f6f4615ea4aa9c9425550058fb 354 PANTHER PTHR24220:SF336 29 39 4.8E-136 T 23-04-2016 RR42_RS18190 408657f6f4615ea4aa9c9425550058fb 354 PANTHER PTHR24220:SF336 60 350 4.8E-136 T 23-04-2016 RR42_RS18190 408657f6f4615ea4aa9c9425550058fb 354 PANTHER PTHR24220 29 39 4.8E-136 T 23-04-2016 RR42_RS18190 408657f6f4615ea4aa9c9425550058fb 354 PANTHER PTHR24220 60 350 4.8E-136 T 23-04-2016 RR42_RS18190 408657f6f4615ea4aa9c9425550058fb 354 SUPERFAMILY SSF52540 55 286 1.23E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18190 408657f6f4615ea4aa9c9425550058fb 354 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 264 350 4.1E-27 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RR42_RS11270 6748c6f1ce6bcdf54af80813a3dfa9be 865 PRINTS PR00415 Aconitase family signature 464 477 6.4E-29 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS11270 6748c6f1ce6bcdf54af80813a3dfa9be 865 PRINTS PR00415 Aconitase family signature 360 374 6.4E-29 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS11270 6748c6f1ce6bcdf54af80813a3dfa9be 865 PRINTS PR00415 Aconitase family signature 267 280 6.4E-29 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS11270 6748c6f1ce6bcdf54af80813a3dfa9be 865 PRINTS PR00415 Aconitase family signature 281 294 6.4E-29 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS11270 6748c6f1ce6bcdf54af80813a3dfa9be 865 PRINTS PR00415 Aconitase family signature 191 204 6.4E-29 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS11270 6748c6f1ce6bcdf54af80813a3dfa9be 865 PRINTS PR00415 Aconitase family signature 138 151 6.4E-29 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS11270 6748c6f1ce6bcdf54af80813a3dfa9be 865 PRINTS PR00415 Aconitase family signature 402 413 6.4E-29 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS11270 6748c6f1ce6bcdf54af80813a3dfa9be 865 PRINTS PR00415 Aconitase family signature 162 170 6.4E-29 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS11270 6748c6f1ce6bcdf54af80813a3dfa9be 865 PRINTS PR00415 Aconitase family signature 205 220 6.4E-29 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS11270 6748c6f1ce6bcdf54af80813a3dfa9be 865 Gene3D G3DSA:3.30.499.10 360 546 8.5E-55 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS11270 6748c6f1ce6bcdf54af80813a3dfa9be 865 PANTHER PTHR11670 720 861 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS11270 6748c6f1ce6bcdf54af80813a3dfa9be 865 PANTHER PTHR11670 8 677 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS11270 6748c6f1ce6bcdf54af80813a3dfa9be 865 PANTHER PTHR11670:SF43 720 861 0.0 T 23-04-2016 RR42_RS11270 6748c6f1ce6bcdf54af80813a3dfa9be 865 PANTHER PTHR11670:SF43 8 677 0.0 T 23-04-2016 RR42_RS11270 6748c6f1ce6bcdf54af80813a3dfa9be 865 SUPERFAMILY SSF52016 599 857 2.55E-67 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RR42_RS11270 6748c6f1ce6bcdf54af80813a3dfa9be 865 Pfam PF00694 Aconitase C-terminal domain 657 787 2.3E-29 T 23-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS11270 6748c6f1ce6bcdf54af80813a3dfa9be 865 Pfam PF00330 Aconitase family (aconitate hydratase) 69 533 4.5E-146 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS11270 6748c6f1ce6bcdf54af80813a3dfa9be 865 Gene3D G3DSA:3.30.499.10 23 226 7.8E-64 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS11270 6748c6f1ce6bcdf54af80813a3dfa9be 865 SUPERFAMILY SSF53732 23 587 7.85E-185 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS11270 6748c6f1ce6bcdf54af80813a3dfa9be 865 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 859 0.0 T 23-04-2016 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|UniPathway: UPA00946 RR42_RS11270 6748c6f1ce6bcdf54af80813a3dfa9be 865 Gene3D G3DSA:3.20.19.10 606 857 1.1E-64 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RR42_RS11270 6748c6f1ce6bcdf54af80813a3dfa9be 865 Gene3D G3DSA:3.40.1060.10 227 359 1.0E-31 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS16735 2b7cf4b42ad48446329d777b1fe9a30c 272 SMART SM00850 176 272 4.3E-28 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 RR42_RS16735 2b7cf4b42ad48446329d777b1fe9a30c 272 SMART SM00448 3 120 1.0E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS16735 2b7cf4b42ad48446329d777b1fe9a30c 272 Gene3D G3DSA:2.40.50.40 168 232 4.6E-17 T 23-04-2016 RR42_RS16735 2b7cf4b42ad48446329d777b1fe9a30c 272 Pfam PF04397 LytTr DNA-binding domain 177 271 7.7E-26 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 RR42_RS16735 2b7cf4b42ad48446329d777b1fe9a30c 272 Gene3D G3DSA:3.40.50.2300 3 126 3.4E-26 T 23-04-2016 RR42_RS16735 2b7cf4b42ad48446329d777b1fe9a30c 272 PANTHER PTHR26402:SF524 3 132 2.7E-38 T 23-04-2016 RR42_RS16735 2b7cf4b42ad48446329d777b1fe9a30c 272 SUPERFAMILY SSF52172 4 131 3.42E-26 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS16735 2b7cf4b42ad48446329d777b1fe9a30c 272 PANTHER PTHR26402 3 132 2.7E-38 T 23-04-2016 RR42_RS16735 2b7cf4b42ad48446329d777b1fe9a30c 272 Pfam PF00072 Response regulator receiver domain 6 119 6.3E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS37765 de5ad5b00394a8d80c07002d1365449c 130 SUPERFAMILY SSF141488 46 122 4.71E-20 T 23-04-2016 IPR018660 C-type lysozyme, inhibitor RR42_RS37765 de5ad5b00394a8d80c07002d1365449c 130 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 51 114 5.8E-19 T 23-04-2016 IPR018660 C-type lysozyme, inhibitor RR42_RS15610 0ad8f79dc19ca05af537ec967aa44199 161 Gene3D G3DSA:2.60.120.10 22 147 1.8E-31 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS15610 0ad8f79dc19ca05af537ec967aa44199 161 SUPERFAMILY SSF51182 19 142 2.41E-16 T 23-04-2016 IPR011051 RmlC-like cupin domain RR42_RS15610 0ad8f79dc19ca05af537ec967aa44199 161 Pfam PF07883 Cupin domain 68 118 1.2E-6 T 23-04-2016 IPR013096 Cupin 2, conserved barrel RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 34 117 3.0E-18 T 23-04-2016 IPR021993 Putative metal-binding domain of cation transport ATPase RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 312 574 2.7E-34 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 623 830 7.8E-33 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 SUPERFAMILY SSF81653 350 438 4.97E-22 T 23-04-2016 RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 Gene3D G3DSA:2.70.150.10 302 439 4.6E-22 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 Pfam PF00702 haloacid dehalogenase-like hydrolase 538 759 2.2E-28 T 23-04-2016 RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 PANTHER PTHR24093 108 850 6.1E-158 T 23-04-2016 RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 Pfam PF00403 Heavy-metal-associated domain 130 186 1.0E-8 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 277 848 2.9E-150 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 Pfam PF00122 E1-E2 ATPase 310 530 2.0E-53 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 SUPERFAMILY SSF56784 540 557 1.32E-42 T 23-04-2016 IPR023214 HAD-like domain RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 SUPERFAMILY SSF56784 602 845 1.32E-42 T 23-04-2016 IPR023214 HAD-like domain RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 390 404 9.4E-20 T 23-04-2016 RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 769 781 9.4E-20 T 23-04-2016 RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 693 703 9.4E-20 T 23-04-2016 RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 746 765 9.4E-20 T 23-04-2016 RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 553 9.4E-20 T 23-04-2016 RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 259 848 4.7E-134 T 23-04-2016 RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 Gene3D G3DSA:3.40.50.1000 515 555 1.9E-37 T 23-04-2016 IPR023214 HAD-like domain RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 Gene3D G3DSA:3.40.50.1000 674 814 1.9E-37 T 23-04-2016 IPR023214 HAD-like domain RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 Gene3D G3DSA:3.40.1110.10 565 673 2.6E-13 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 SUPERFAMILY SSF81665 445 533 8.5E-11 T 23-04-2016 RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 SUPERFAMILY SSF81665 795 821 8.5E-11 T 23-04-2016 RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 Gene3D G3DSA:3.30.70.100 123 190 7.0E-13 T 23-04-2016 RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 541 547 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 PANTHER PTHR24093:SF50 108 850 6.1E-158 T 23-04-2016 RR42_RS12920 094913345ccb61390f23c866a520d2b9 856 SUPERFAMILY SSF55008 122 192 3.4E-14 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RR42_RS14685 752b965d61f063d90f894e0dd777e030 640 SMART SM00382 28 230 2.9E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS14685 752b965d61f063d90f894e0dd777e030 640 SMART SM00382 344 515 5.6E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS14685 752b965d61f063d90f894e0dd777e030 640 Gene3D G3DSA:3.40.50.300 136 280 1.4E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14685 752b965d61f063d90f894e0dd777e030 640 Gene3D G3DSA:3.40.50.300 6 103 1.4E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14685 752b965d61f063d90f894e0dd777e030 640 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS14685 752b965d61f063d90f894e0dd777e030 640 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS14685 752b965d61f063d90f894e0dd777e030 640 Pfam PF16326 ABC transporter C-terminal domain 564 632 7.0E-21 T 23-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 RR42_RS14685 752b965d61f063d90f894e0dd777e030 640 Pfam PF00005 ABC transporter 337 469 5.3E-23 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS14685 752b965d61f063d90f894e0dd777e030 640 Pfam PF00005 ABC transporter 19 185 3.7E-26 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS14685 752b965d61f063d90f894e0dd777e030 640 Gene3D G3DSA:3.40.50.300 321 510 1.3E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14685 752b965d61f063d90f894e0dd777e030 640 PANTHER PTHR19211:SF45 1 574 6.6E-215 T 23-04-2016 RR42_RS14685 752b965d61f063d90f894e0dd777e030 640 PANTHER PTHR19211 1 574 6.6E-215 T 23-04-2016 RR42_RS14685 752b965d61f063d90f894e0dd777e030 640 SUPERFAMILY SSF52540 126 242 2.45E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14685 752b965d61f063d90f894e0dd777e030 640 SUPERFAMILY SSF52540 4 94 2.45E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14685 752b965d61f063d90f894e0dd777e030 640 SUPERFAMILY SSF52540 314 521 1.8E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14685 752b965d61f063d90f894e0dd777e030 640 Pfam PF12848 ABC transporter 224 294 2.6E-9 T 23-04-2016 IPR032781 ABC-transporter extension domain RR42_RS01420 b7a348461bd9db9d78259b5dbfa33de7 411 Gene3D G3DSA:1.10.3090.10 128 364 2.6E-52 T 23-04-2016 RR42_RS01420 b7a348461bd9db9d78259b5dbfa33de7 411 PIRSF PIRSF000813 1 409 2.6E-193 T 23-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 RR42_RS01420 b7a348461bd9db9d78259b5dbfa33de7 411 SUPERFAMILY SSF81891 128 363 5.76E-51 T 23-04-2016 RR42_RS01420 b7a348461bd9db9d78259b5dbfa33de7 411 SUPERFAMILY SSF81301 1 125 1.53E-27 T 23-04-2016 RR42_RS01420 b7a348461bd9db9d78259b5dbfa33de7 411 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 411 50.977 T 23-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 RR42_RS01420 b7a348461bd9db9d78259b5dbfa33de7 411 Gene3D G3DSA:3.30.460.10 1 127 7.6E-28 T 23-04-2016 RR42_RS01420 b7a348461bd9db9d78259b5dbfa33de7 411 PANTHER PTHR13734 1 240 1.1E-64 T 23-04-2016 RR42_RS01420 b7a348461bd9db9d78259b5dbfa33de7 411 Pfam PF01966 HD domain 235 332 5.4E-10 T 23-04-2016 IPR006674 HD domain RR42_RS01420 b7a348461bd9db9d78259b5dbfa33de7 411 Pfam PF01743 Poly A polymerase head domain 3 127 4.3E-15 T 23-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 RR42_RS01420 b7a348461bd9db9d78259b5dbfa33de7 411 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 153 215 2.2E-11 T 23-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain RR42_RS02675 03e89c0b681e24d3ff72c922bda4be9f 166 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 150 3.7E-54 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RR42_RS02675 03e89c0b681e24d3ff72c922bda4be9f 166 Gene3D G3DSA:3.50.80.10 1 148 6.9E-53 T 23-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain RR42_RS02675 03e89c0b681e24d3ff72c922bda4be9f 166 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 148 3.6E-49 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RR42_RS02675 03e89c0b681e24d3ff72c922bda4be9f 166 PANTHER PTHR10472 2 148 2.7E-65 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RR42_RS02675 03e89c0b681e24d3ff72c922bda4be9f 166 SUPERFAMILY SSF69500 1 149 3.4E-51 T 23-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain RR42_RS02675 03e89c0b681e24d3ff72c922bda4be9f 166 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 150 33.281 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RR42_RS17385 58fbb9bcfb3f651c18add9af37f39f3c 317 PANTHER PTHR30346:SF15 1 297 1.9E-100 T 23-04-2016 RR42_RS17385 58fbb9bcfb3f651c18add9af37f39f3c 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.6E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS17385 58fbb9bcfb3f651c18add9af37f39f3c 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.6E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS17385 58fbb9bcfb3f651c18add9af37f39f3c 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.6E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS17385 58fbb9bcfb3f651c18add9af37f39f3c 317 SUPERFAMILY SSF53850 88 300 4.51E-43 T 23-04-2016 RR42_RS17385 58fbb9bcfb3f651c18add9af37f39f3c 317 Gene3D G3DSA:1.10.10.10 1 84 1.9E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS17385 58fbb9bcfb3f651c18add9af37f39f3c 317 Gene3D G3DSA:3.40.190.10 176 275 1.1E-32 T 23-04-2016 RR42_RS17385 58fbb9bcfb3f651c18add9af37f39f3c 317 Pfam PF03466 LysR substrate binding domain 88 298 3.4E-49 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS17385 58fbb9bcfb3f651c18add9af37f39f3c 317 PANTHER PTHR30346 1 297 1.9E-100 T 23-04-2016 RR42_RS17385 58fbb9bcfb3f651c18add9af37f39f3c 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.0E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS17385 58fbb9bcfb3f651c18add9af37f39f3c 317 SUPERFAMILY SSF46785 1 84 1.69E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS17385 58fbb9bcfb3f651c18add9af37f39f3c 317 Gene3D G3DSA:3.40.190.10 90 175 6.2E-21 T 23-04-2016 RR42_RS17430 62ea1e654aa8b9c2047f7b659750f35d 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 400 9.4E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS17430 62ea1e654aa8b9c2047f7b659750f35d 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 421 9.4E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS17430 62ea1e654aa8b9c2047f7b659750f35d 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 440 9.4E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS17430 62ea1e654aa8b9c2047f7b659750f35d 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 9.4E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS17430 62ea1e654aa8b9c2047f7b659750f35d 443 Gene3D G3DSA:3.30.565.10 311 441 6.1E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS17430 62ea1e654aa8b9c2047f7b659750f35d 443 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 332 441 5.0E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS17430 62ea1e654aa8b9c2047f7b659750f35d 443 Pfam PF00512 His Kinase A (phospho-acceptor) domain 223 284 2.8E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS17430 62ea1e654aa8b9c2047f7b659750f35d 443 SMART SM00387 331 443 1.1E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS17430 62ea1e654aa8b9c2047f7b659750f35d 443 SUPERFAMILY SSF47384 216 284 1.33E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS17430 62ea1e654aa8b9c2047f7b659750f35d 443 SMART SM00388 221 289 1.3E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS17430 62ea1e654aa8b9c2047f7b659750f35d 443 PANTHER PTHR24423:SF450 198 440 2.6E-47 T 23-04-2016 RR42_RS17430 62ea1e654aa8b9c2047f7b659750f35d 443 SUPERFAMILY SSF55874 314 441 5.37E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS17430 62ea1e654aa8b9c2047f7b659750f35d 443 PANTHER PTHR24423 198 440 2.6E-47 T 23-04-2016 RR42_RS12250 b3affcb0d0fef079b3588a5a38b88e77 374 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 241 1.6E-120 T 23-04-2016 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 RR42_RS12250 b3affcb0d0fef079b3588a5a38b88e77 374 Gene3D G3DSA:3.40.50.300 2 239 1.0E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12250 b3affcb0d0fef079b3588a5a38b88e77 374 PANTHER PTHR24220:SF123 4 251 6.5E-137 T 23-04-2016 RR42_RS12250 b3affcb0d0fef079b3588a5a38b88e77 374 Pfam PF12857 TOBE-like domain 292 349 2.2E-17 T 23-04-2016 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 RR42_RS12250 b3affcb0d0fef079b3588a5a38b88e77 374 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS12250 b3affcb0d0fef079b3588a5a38b88e77 374 SUPERFAMILY SSF52540 3 245 8.83E-86 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12250 b3affcb0d0fef079b3588a5a38b88e77 374 SMART SM00382 27 214 6.7E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS12250 b3affcb0d0fef079b3588a5a38b88e77 374 SUPERFAMILY SSF50331 239 355 2.72E-7 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RR42_RS12250 b3affcb0d0fef079b3588a5a38b88e77 374 PANTHER PTHR24220 4 251 6.5E-137 T 23-04-2016 RR42_RS12250 b3affcb0d0fef079b3588a5a38b88e77 374 Pfam PF00005 ABC transporter 18 164 5.2E-36 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS01965 172306c0ef902d32381c278a5b8af85f 233 PANTHER PTHR11820 25 232 3.4E-91 T 23-04-2016 RR42_RS01965 172306c0ef902d32381c278a5b8af85f 233 PANTHER PTHR11820:SF7 25 232 3.4E-91 T 23-04-2016 RR42_RS01965 172306c0ef902d32381c278a5b8af85f 233 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 28 232 5.7E-56 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RR42_RS01965 172306c0ef902d32381c278a5b8af85f 233 Gene3D G3DSA:3.90.850.10 21 233 2.1E-84 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RR42_RS01965 172306c0ef902d32381c278a5b8af85f 233 SUPERFAMILY SSF56529 20 233 1.7E-71 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 SUPERFAMILY SSF82693 38 132 3.92E-26 T 23-04-2016 RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 8.5E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 8.5E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 8.5E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 8.5E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 8.5E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 8.5E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 8.5E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 8.5E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 8.5E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 Gene3D G3DSA:3.30.70.1430 38 140 1.3E-33 T 23-04-2016 RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 PANTHER PTHR32063:SF13 1 1037 0.0 T 23-04-2016 RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 SUPERFAMILY SSF82693 135 182 2.09E-24 T 23-04-2016 RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 Gene3D G3DSA:3.30.2090.10 181 274 1.3E-25 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 SUPERFAMILY SSF82693 274 330 2.09E-24 T 23-04-2016 RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 SUPERFAMILY SSF82866 298 497 2.09E-49 T 23-04-2016 RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 SUPERFAMILY SSF82866 807 1030 3.66E-46 T 23-04-2016 RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 Gene3D G3DSA:3.30.2090.10 723 808 5.9E-22 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 SUPERFAMILY SSF82693 566 670 4.39E-30 T 23-04-2016 RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 Gene3D G3DSA:1.10.3850.10 815 1027 1.8E-57 T 23-04-2016 RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 Gene3D G3DSA:1.10.3850.10 279 498 1.3E-59 T 23-04-2016 RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 Gene3D G3DSA:3.30.70.1430 568 671 2.5E-35 T 23-04-2016 RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 SUPERFAMILY SSF82714 723 808 1.44E-19 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 SUPERFAMILY SSF82714 182 271 2.62E-21 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 PANTHER PTHR32063 1 1037 0.0 T 23-04-2016 RR42_RS20650 83899cc2a6b6950d69748233b81607cd 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1037 0.0 T 23-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 RR42_RS01725 1a8670962da2e6b77bd0b8048e62c8db 167 SUPERFAMILY SSF52833 49 158 8.41E-7 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS01725 1a8670962da2e6b77bd0b8048e62c8db 167 Gene3D G3DSA:3.40.30.10 41 158 5.5E-7 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS19180 d7445b0c898a5802119af3007f3e736c 177 Gene3D G3DSA:3.90.930.12 2 82 6.9E-28 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RR42_RS19180 d7445b0c898a5802119af3007f3e736c 177 PANTHER PTHR11655:SF14 1 176 9.1E-86 T 23-04-2016 RR42_RS19180 d7445b0c898a5802119af3007f3e736c 177 Gene3D G3DSA:3.90.930.12 83 177 9.0E-40 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RR42_RS19180 d7445b0c898a5802119af3007f3e736c 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.2E-73 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RR42_RS19180 d7445b0c898a5802119af3007f3e736c 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.5E-32 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RR42_RS19180 d7445b0c898a5802119af3007f3e736c 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.5E-32 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RR42_RS19180 d7445b0c898a5802119af3007f3e736c 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.5E-32 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RR42_RS19180 d7445b0c898a5802119af3007f3e736c 177 PANTHER PTHR11655 1 176 9.1E-86 T 23-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RR42_RS19180 d7445b0c898a5802119af3007f3e736c 177 Pfam PF00347 Ribosomal protein L6 12 82 2.0E-16 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RR42_RS19180 d7445b0c898a5802119af3007f3e736c 177 Pfam PF00347 Ribosomal protein L6 90 164 1.2E-18 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RR42_RS19180 d7445b0c898a5802119af3007f3e736c 177 SUPERFAMILY SSF56053 1 82 7.4E-24 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RR42_RS19180 d7445b0c898a5802119af3007f3e736c 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 23-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19180 d7445b0c898a5802119af3007f3e736c 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.866 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RR42_RS19180 d7445b0c898a5802119af3007f3e736c 177 SUPERFAMILY SSF56053 83 177 7.07E-35 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RR42_RS19180 d7445b0c898a5802119af3007f3e736c 177 PIRSF PIRSF002162 1 177 1.7E-44 T 23-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RR42_RS13080 f785ecb4180d241056e15eb9e30a0143 203 PANTHER PTHR15020 1 203 1.5E-70 T 23-04-2016 RR42_RS13080 f785ecb4180d241056e15eb9e30a0143 203 Pfam PF13460 NAD(P)H-binding 7 190 1.2E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS13080 f785ecb4180d241056e15eb9e30a0143 203 Gene3D G3DSA:3.40.50.720 1 203 1.3E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS13080 f785ecb4180d241056e15eb9e30a0143 203 PANTHER PTHR15020:SF29 1 203 1.5E-70 T 23-04-2016 RR42_RS13080 f785ecb4180d241056e15eb9e30a0143 203 SUPERFAMILY SSF51735 1 201 5.83E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS16220 260642a91fa41a6533d1391eab1a0bf2 156 Gene3D G3DSA:3.40.50.10110 1 136 2.0E-40 T 23-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 RR42_RS16220 260642a91fa41a6533d1391eab1a0bf2 156 PANTHER PTHR38767 16 139 3.2E-20 T 23-04-2016 RR42_RS16220 260642a91fa41a6533d1391eab1a0bf2 156 SUPERFAMILY SSF102400 1 136 1.11E-39 T 23-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 RR42_RS16220 260642a91fa41a6533d1391eab1a0bf2 156 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 131 8.9E-37 T 23-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 RR42_RS23575 2cd59c7af71b3e6bc95cae8889aec160 106 Gene3D G3DSA:2.60.450.10 57 106 7.7E-5 T 23-04-2016 RR42_RS00350 551ee5e896b85dd0fd97ae5350672e4f 300 Gene3D G3DSA:3.40.190.10 95 195 2.7E-19 T 23-04-2016 RR42_RS00350 551ee5e896b85dd0fd97ae5350672e4f 300 Gene3D G3DSA:1.10.10.10 6 88 6.5E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS00350 551ee5e896b85dd0fd97ae5350672e4f 300 SUPERFAMILY SSF46785 5 115 6.53E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS00350 551ee5e896b85dd0fd97ae5350672e4f 300 SUPERFAMILY SSF53850 92 292 2.35E-35 T 23-04-2016 RR42_RS00350 551ee5e896b85dd0fd97ae5350672e4f 300 PANTHER PTHR30537 1 295 9.7E-64 T 23-04-2016 RR42_RS00350 551ee5e896b85dd0fd97ae5350672e4f 300 Pfam PF03466 LysR substrate binding domain 91 288 7.1E-32 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS00350 551ee5e896b85dd0fd97ae5350672e4f 300 PANTHER PTHR30537:SF3 1 295 9.7E-64 T 23-04-2016 RR42_RS00350 551ee5e896b85dd0fd97ae5350672e4f 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.4E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS00350 551ee5e896b85dd0fd97ae5350672e4f 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.4E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS00350 551ee5e896b85dd0fd97ae5350672e4f 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.4E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS00350 551ee5e896b85dd0fd97ae5350672e4f 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.3E-20 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS34315 ad6add5b138577325dd1cedeaae395b9 254 Gene3D G3DSA:3.40.50.1100 1 98 1.7E-22 T 23-04-2016 RR42_RS34315 ad6add5b138577325dd1cedeaae395b9 254 PANTHER PTHR10314 1 253 8.0E-144 T 23-04-2016 RR42_RS34315 ad6add5b138577325dd1cedeaae395b9 254 Gene3D G3DSA:3.40.50.1100 99 253 9.0E-24 T 23-04-2016 RR42_RS34315 ad6add5b138577325dd1cedeaae395b9 254 PANTHER PTHR10314:SF126 1 253 8.0E-144 T 23-04-2016 RR42_RS34315 ad6add5b138577325dd1cedeaae395b9 254 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 1 252 1.9E-34 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RR42_RS34315 ad6add5b138577325dd1cedeaae395b9 254 SUPERFAMILY SSF53686 1 253 2.62E-49 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RR42_RS02450 1a268cb331028e52f05567b0375c648d 435 ProSitePatterns PS00217 Sugar transport proteins signature 2. 124 149 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RR42_RS02450 1a268cb331028e52f05567b0375c648d 435 Pfam PF00083 Sugar (and other) transporter 15 223 1.5E-21 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RR42_RS02450 1a268cb331028e52f05567b0375c648d 435 Gene3D G3DSA:1.20.1250.20 12 214 2.7E-20 T 23-04-2016 RR42_RS02450 1a268cb331028e52f05567b0375c648d 435 Gene3D G3DSA:1.20.1250.20 237 424 6.0E-13 T 23-04-2016 RR42_RS02450 1a268cb331028e52f05567b0375c648d 435 SUPERFAMILY SSF103473 9 425 1.44E-55 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS02450 1a268cb331028e52f05567b0375c648d 435 PANTHER PTHR23508:SF1 2 415 6.9E-125 T 23-04-2016 RR42_RS02450 1a268cb331028e52f05567b0375c648d 435 PANTHER PTHR23508 2 415 6.9E-125 T 23-04-2016 RR42_RS14615 4f1171a13bd68bbe8aa4f281944e395a 141 Gene3D G3DSA:3.40.50.1010 6 139 2.3E-23 T 23-04-2016 IPR029060 PIN domain-like RR42_RS14615 4f1171a13bd68bbe8aa4f281944e395a 141 PANTHER PTHR33653:SF1 3 138 1.3E-18 T 23-04-2016 RR42_RS14615 4f1171a13bd68bbe8aa4f281944e395a 141 Pfam PF01850 PIN domain 8 125 2.1E-12 T 23-04-2016 IPR002716 PIN domain RR42_RS14615 4f1171a13bd68bbe8aa4f281944e395a 141 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 7 137 10.8 T 23-04-2016 IPR022907 VapC family GO:0004540 RR42_RS14615 4f1171a13bd68bbe8aa4f281944e395a 141 PANTHER PTHR33653 3 138 1.3E-18 T 23-04-2016 RR42_RS14615 4f1171a13bd68bbe8aa4f281944e395a 141 SUPERFAMILY SSF88723 7 139 7.57E-28 T 23-04-2016 IPR029060 PIN domain-like RR42_RS00730 d6341154a000b5e0fbf2920f23a25751 272 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 116 136 - T 23-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RR42_RS00730 d6341154a000b5e0fbf2920f23a25751 272 PANTHER PTHR11941 1 271 3.8E-121 T 23-04-2016 RR42_RS00730 d6341154a000b5e0fbf2920f23a25751 272 Pfam PF00378 Enoyl-CoA hydratase/isomerase 41 272 1.0E-38 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RR42_RS00730 d6341154a000b5e0fbf2920f23a25751 272 PANTHER PTHR11941:SF15 1 271 3.8E-121 T 23-04-2016 RR42_RS00730 d6341154a000b5e0fbf2920f23a25751 272 SUPERFAMILY SSF52096 11 271 6.94E-63 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS00730 d6341154a000b5e0fbf2920f23a25751 272 Gene3D G3DSA:3.90.226.10 10 268 2.6E-59 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS16565 fae3c84c94920d5a697e7d88f01e12e3 334 PANTHER PTHR30349 8 299 1.2E-61 T 23-04-2016 RR42_RS16565 fae3c84c94920d5a697e7d88f01e12e3 334 SUPERFAMILY SSF53850 121 288 2.17E-9 T 23-04-2016 RR42_RS16565 fae3c84c94920d5a697e7d88f01e12e3 334 PANTHER PTHR30349:SF1 8 299 1.2E-61 T 23-04-2016 RR42_RS16565 fae3c84c94920d5a697e7d88f01e12e3 334 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 60 330 7.1E-66 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS16565 fae3c84c94920d5a697e7d88f01e12e3 334 PIRSF PIRSF017082 1 333 1.3E-63 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS00700 8589eb230b993892ee99a5e9f3d3bbc2 280 SUPERFAMILY SSF53067 14 140 1.79E-21 T 23-04-2016 RR42_RS00700 8589eb230b993892ee99a5e9f3d3bbc2 280 Gene3D G3DSA:3.30.420.40 115 273 6.7E-42 T 23-04-2016 RR42_RS00700 8589eb230b993892ee99a5e9f3d3bbc2 280 Pfam PF03309 Type III pantothenate kinase 14 228 1.7E-59 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 RR42_RS00700 8589eb230b993892ee99a5e9f3d3bbc2 280 Hamap MF_01274 Type III pantothenate kinase [coaX]. 12 275 18.028 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 RR42_RS00700 8589eb230b993892ee99a5e9f3d3bbc2 280 PANTHER PTHR34265 8 275 4.6E-29 T 23-04-2016 RR42_RS00700 8589eb230b993892ee99a5e9f3d3bbc2 280 SUPERFAMILY SSF53067 145 271 1.45E-28 T 23-04-2016 RR42_RS00700 8589eb230b993892ee99a5e9f3d3bbc2 280 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 116 268 3.5E-20 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 RR42_RS18935 e79ba18c868cfbfe6a9c4ddfc75a1e2b 276 PRINTS PR00164 ABC-2 type transport system membrane protein signature 78 100 3.9E-9 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RR42_RS18935 e79ba18c868cfbfe6a9c4ddfc75a1e2b 276 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 3.9E-9 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RR42_RS18935 e79ba18c868cfbfe6a9c4ddfc75a1e2b 276 PRINTS PR00164 ABC-2 type transport system membrane protein signature 216 235 3.9E-9 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RR42_RS18935 e79ba18c868cfbfe6a9c4ddfc75a1e2b 276 Pfam PF01061 ABC-2 type transporter 29 239 3.7E-39 T 23-04-2016 IPR013525 ABC-2 type transporter GO:0016020 RR42_RS18935 e79ba18c868cfbfe6a9c4ddfc75a1e2b 276 PIRSF PIRSF006648 9 273 2.5E-22 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RR42_RS18935 e79ba18c868cfbfe6a9c4ddfc75a1e2b 276 PANTHER PTHR30413 26 275 7.3E-68 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RR42_RS18935 e79ba18c868cfbfe6a9c4ddfc75a1e2b 276 PANTHER PTHR30413:SF2 26 275 7.3E-68 T 23-04-2016 RR42_RS02445 f3ded93c09da785c80efae899dd06660 601 Pfam PF01336 OB-fold nucleic acid binding domain 21 105 1.1E-17 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RR42_RS02445 f3ded93c09da785c80efae899dd06660 601 Gene3D G3DSA:3.30.1360.30 281 418 5.0E-44 T 23-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 RR42_RS02445 f3ded93c09da785c80efae899dd06660 601 PRINTS PR01042 Aspartyl-tRNA synthetase signature 194 206 1.7E-25 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS02445 f3ded93c09da785c80efae899dd06660 601 PRINTS PR01042 Aspartyl-tRNA synthetase signature 211 224 1.7E-25 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS02445 f3ded93c09da785c80efae899dd06660 601 PRINTS PR01042 Aspartyl-tRNA synthetase signature 528 542 1.7E-25 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS02445 f3ded93c09da785c80efae899dd06660 601 PRINTS PR01042 Aspartyl-tRNA synthetase signature 484 500 1.7E-25 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS02445 f3ded93c09da785c80efae899dd06660 601 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 4 592 5.8E-242 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 RR42_RS02445 f3ded93c09da785c80efae899dd06660 601 SUPERFAMILY SSF55261 295 420 3.27E-42 T 23-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 RR42_RS02445 f3ded93c09da785c80efae899dd06660 601 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 4 573 35.602 T 23-04-2016 RR42_RS02445 f3ded93c09da785c80efae899dd06660 601 Pfam PF02938 GAD domain 312 410 3.3E-28 T 23-04-2016 IPR029351 GAD domain RR42_RS02445 f3ded93c09da785c80efae899dd06660 601 SUPERFAMILY SSF50249 4 108 1.22E-33 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS02445 f3ded93c09da785c80efae899dd06660 601 SUPERFAMILY SSF55681 113 296 4.58E-104 T 23-04-2016 RR42_RS02445 f3ded93c09da785c80efae899dd06660 601 SUPERFAMILY SSF55681 434 594 4.58E-104 T 23-04-2016 RR42_RS02445 f3ded93c09da785c80efae899dd06660 601 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 568 4.3E-105 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS02445 f3ded93c09da785c80efae899dd06660 601 PANTHER PTHR22594:SF5 375 581 2.5E-242 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 RR42_RS02445 f3ded93c09da785c80efae899dd06660 601 PANTHER PTHR22594:SF5 3 301 2.5E-242 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 RR42_RS02445 f3ded93c09da785c80efae899dd06660 601 Gene3D G3DSA:2.40.50.140 4 110 3.0E-39 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS02445 f3ded93c09da785c80efae899dd06660 601 PANTHER PTHR22594 375 581 2.5E-242 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS02445 f3ded93c09da785c80efae899dd06660 601 PANTHER PTHR22594 3 301 2.5E-242 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS02445 f3ded93c09da785c80efae899dd06660 601 Gene3D G3DSA:3.30.930.10 135 280 4.2E-110 T 23-04-2016 RR42_RS02445 f3ded93c09da785c80efae899dd06660 601 Gene3D G3DSA:3.30.930.10 419 594 4.2E-110 T 23-04-2016 RR42_RS18515 08045d9e9cb019fd47844724580b3939 269 SUPERFAMILY SSF55347 129 236 1.13E-34 T 23-04-2016 RR42_RS18515 08045d9e9cb019fd47844724580b3939 269 Gene3D G3DSA:3.30.360.10 143 234 5.2E-20 T 23-04-2016 RR42_RS18515 08045d9e9cb019fd47844724580b3939 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 5 128 1.1E-18 T 23-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS18515 08045d9e9cb019fd47844724580b3939 269 PANTHER PTHR20836 1 265 2.5E-46 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS18515 08045d9e9cb019fd47844724580b3939 269 PIRSF PIRSF000161 3 268 8.3E-42 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS18515 08045d9e9cb019fd47844724580b3939 269 SUPERFAMILY SSF51735 4 153 1.27E-25 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS18515 08045d9e9cb019fd47844724580b3939 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 5 266 3.0E-42 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS18515 08045d9e9cb019fd47844724580b3939 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 263 9.0E-17 T 23-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS18515 08045d9e9cb019fd47844724580b3939 269 Gene3D G3DSA:3.40.50.720 3 142 3.3E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS33540 ccfcfe4566a646fc5cd96b71569ac454 197 PANTHER PTHR11908 1 44 2.7E-38 T 23-04-2016 RR42_RS33540 ccfcfe4566a646fc5cd96b71569ac454 197 PANTHER PTHR11908 64 196 2.7E-38 T 23-04-2016 RR42_RS33540 ccfcfe4566a646fc5cd96b71569ac454 197 SUPERFAMILY SSF56003 2 196 3.01E-51 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS33540 ccfcfe4566a646fc5cd96b71569ac454 197 Gene3D G3DSA:3.30.365.10 102 196 8.3E-32 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS33540 ccfcfe4566a646fc5cd96b71569ac454 197 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 1 173 6.2E-42 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS33540 ccfcfe4566a646fc5cd96b71569ac454 197 Gene3D G3DSA:3.30.365.10 1 101 1.9E-17 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS00760 1a6250e9cdd9b03a39863f9d7c684abd 85 Pfam PF12091 Protein of unknown function (DUF3567) 1 85 1.6E-34 T 23-04-2016 IPR021951 Protein of unknown function DUF3567 RR42_RS10770 df0b3bb813d7cc8fbf165b5697fc7d98 622 SUPERFAMILY SSF51905 357 442 1.48E-19 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS10770 df0b3bb813d7cc8fbf165b5697fc7d98 622 SUPERFAMILY SSF51905 62 158 1.48E-19 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS10770 df0b3bb813d7cc8fbf165b5697fc7d98 622 PANTHER PTHR10742 1 37 4.5E-37 T 23-04-2016 RR42_RS10770 df0b3bb813d7cc8fbf165b5697fc7d98 622 PANTHER PTHR10742 70 246 4.5E-37 T 23-04-2016 RR42_RS10770 df0b3bb813d7cc8fbf165b5697fc7d98 622 PANTHER PTHR10742 307 622 4.5E-37 T 23-04-2016 RR42_RS10770 df0b3bb813d7cc8fbf165b5697fc7d98 622 Gene3D G3DSA:3.50.50.60 367 477 6.6E-20 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS10770 df0b3bb813d7cc8fbf165b5697fc7d98 622 Gene3D G3DSA:3.50.50.60 70 123 6.6E-20 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS10770 df0b3bb813d7cc8fbf165b5697fc7d98 622 Gene3D G3DSA:3.50.50.60 156 199 6.6E-20 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS10770 df0b3bb813d7cc8fbf165b5697fc7d98 622 PANTHER PTHR10742:SF255 1 37 4.5E-37 T 23-04-2016 RR42_RS10770 df0b3bb813d7cc8fbf165b5697fc7d98 622 PANTHER PTHR10742:SF255 70 246 4.5E-37 T 23-04-2016 RR42_RS10770 df0b3bb813d7cc8fbf165b5697fc7d98 622 PANTHER PTHR10742:SF255 307 622 4.5E-37 T 23-04-2016 RR42_RS10770 df0b3bb813d7cc8fbf165b5697fc7d98 622 Pfam PF13450 NAD(P)-binding Rossmann-like domain 76 136 2.0E-13 T 23-04-2016 RR42_RS07195 c75123a90fdb0bfa513ee907db37c8ab 132 SUPERFAMILY SSF88697 72 125 2.44E-22 T 23-04-2016 IPR015947 PUA-like domain RR42_RS07195 c75123a90fdb0bfa513ee907db37c8ab 132 SUPERFAMILY SSF88697 2 39 2.44E-22 T 23-04-2016 IPR015947 PUA-like domain RR42_RS07195 c75123a90fdb0bfa513ee907db37c8ab 132 PANTHER PTHR12963 4 38 6.4E-12 T 23-04-2016 RR42_RS07195 c75123a90fdb0bfa513ee907db37c8ab 132 Gene3D G3DSA:2.30.130.30 72 124 7.2E-26 T 23-04-2016 RR42_RS07195 c75123a90fdb0bfa513ee907db37c8ab 132 Gene3D G3DSA:2.30.130.30 2 39 7.2E-26 T 23-04-2016 RR42_RS07195 c75123a90fdb0bfa513ee907db37c8ab 132 Pfam PF04266 ASCH domain 4 86 5.6E-11 T 23-04-2016 IPR007374 ASCH domain RR42_RS12875 bc09c8f044078fb8118b818a9e8960f1 241 Pfam PF13545 Crp-like helix-turn-helix domain 162 235 1.5E-17 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RR42_RS12875 bc09c8f044078fb8118b818a9e8960f1 241 SMART SM00100 24 145 2.0E-12 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain RR42_RS12875 bc09c8f044078fb8118b818a9e8960f1 241 Gene3D G3DSA:1.10.10.10 165 238 4.5E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS12875 bc09c8f044078fb8118b818a9e8960f1 241 SUPERFAMILY SSF46785 160 237 9.99E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS12875 bc09c8f044078fb8118b818a9e8960f1 241 SUPERFAMILY SSF51206 17 156 7.99E-28 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like RR42_RS12875 bc09c8f044078fb8118b818a9e8960f1 241 SMART SM00419 181 229 1.6E-13 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RR42_RS12875 bc09c8f044078fb8118b818a9e8960f1 241 Gene3D G3DSA:2.60.120.10 14 164 1.1E-25 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS12875 bc09c8f044078fb8118b818a9e8960f1 241 PANTHER PTHR24567 5 236 1.2E-72 T 23-04-2016 RR42_RS12875 bc09c8f044078fb8118b818a9e8960f1 241 PANTHER PTHR24567:SF28 5 236 1.2E-72 T 23-04-2016 RR42_RS12875 bc09c8f044078fb8118b818a9e8960f1 241 Pfam PF00027 Cyclic nucleotide-binding domain 44 126 2.1E-14 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain RR42_RS12875 bc09c8f044078fb8118b818a9e8960f1 241 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 187 203 2.2E-10 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RR42_RS12875 bc09c8f044078fb8118b818a9e8960f1 241 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 203 218 2.2E-10 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RR42_RS08610 d12d8b667100275b97d05e1e57274731 268 Gene3D G3DSA:1.10.101.10 2 65 6.4E-17 T 23-04-2016 IPR002477 Peptidoglycan binding-like RR42_RS08610 d12d8b667100275b97d05e1e57274731 268 SUPERFAMILY SSF47090 3 65 1.36E-15 T 23-04-2016 IPR002477 Peptidoglycan binding-like RR42_RS08610 d12d8b667100275b97d05e1e57274731 268 Pfam PF11860 Protein of unknown function (DUF3380) 90 261 7.5E-63 T 23-04-2016 IPR024408 Domain of unknown function DUF3380 RR42_RS08610 d12d8b667100275b97d05e1e57274731 268 Pfam PF01471 Putative peptidoglycan binding domain 9 64 8.1E-11 T 23-04-2016 IPR002477 Peptidoglycan binding-like RR42_RS01065 fada8a9d676388fb0d22983582737e04 443 Gene3D G3DSA:1.10.8.10 213 243 1.4E-33 T 23-04-2016 RR42_RS01065 fada8a9d676388fb0d22983582737e04 443 Gene3D G3DSA:1.10.8.10 112 177 1.4E-33 T 23-04-2016 RR42_RS01065 fada8a9d676388fb0d22983582737e04 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 5 443 1.6E-204 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RR42_RS01065 fada8a9d676388fb0d22983582737e04 443 PANTHER PTHR11262:SF3 5 106 5.3E-197 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RR42_RS01065 fada8a9d676388fb0d22983582737e04 443 PANTHER PTHR11262:SF3 218 443 5.3E-197 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RR42_RS01065 fada8a9d676388fb0d22983582737e04 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 2 443 43.71 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RR42_RS01065 fada8a9d676388fb0d22983582737e04 443 SMART SM00382 50 332 3.8E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS01065 fada8a9d676388fb0d22983582737e04 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 187 329 5.0E-40 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RR42_RS01065 fada8a9d676388fb0d22983582737e04 443 SUPERFAMILY SSF52540 4 439 3.52E-89 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01065 fada8a9d676388fb0d22983582737e04 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 102 1.9E-6 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RR42_RS01065 fada8a9d676388fb0d22983582737e04 443 Gene3D G3DSA:3.40.50.300 5 111 2.6E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01065 fada8a9d676388fb0d22983582737e04 443 Gene3D G3DSA:3.40.50.300 245 331 2.6E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01065 fada8a9d676388fb0d22983582737e04 443 Gene3D G3DSA:1.10.8.60 335 443 8.7E-32 T 23-04-2016 RR42_RS01065 fada8a9d676388fb0d22983582737e04 443 PANTHER PTHR11262 5 106 5.3E-197 T 23-04-2016 RR42_RS01065 fada8a9d676388fb0d22983582737e04 443 PANTHER PTHR11262 218 443 5.3E-197 T 23-04-2016 RR42_RS01065 fada8a9d676388fb0d22983582737e04 443 SMART SM01086 335 429 1.0E-16 T 23-04-2016 IPR019489 Clp ATPase, C-terminal RR42_RS06140 cdeae3aec04fccdd3e1fc03caeba80ac 317 PANTHER PTHR34595 1 312 1.6E-104 T 23-04-2016 RR42_RS06140 cdeae3aec04fccdd3e1fc03caeba80ac 317 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 311 3.1E-107 T 23-04-2016 IPR007296 Domain of unknown function DUF403 RR42_RS09010 74621a36db0c4df9f2dcd338bfa0ee0f 674 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 256 660 2.2E-117 T 23-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 RR42_RS09010 74621a36db0c4df9f2dcd338bfa0ee0f 674 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 234 8.4E-32 T 23-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 RR42_RS09010 74621a36db0c4df9f2dcd338bfa0ee0f 674 PANTHER PTHR13847 217 585 2.4E-29 T 23-04-2016 RR42_RS09010 74621a36db0c4df9f2dcd338bfa0ee0f 674 PANTHER PTHR13847 601 660 2.4E-29 T 23-04-2016 RR42_RS09010 74621a36db0c4df9f2dcd338bfa0ee0f 674 SUPERFAMILY SSF51905 571 655 4.53E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS09010 74621a36db0c4df9f2dcd338bfa0ee0f 674 SUPERFAMILY SSF51905 256 472 4.53E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS09010 74621a36db0c4df9f2dcd338bfa0ee0f 674 Gene3D G3DSA:3.50.50.60 255 326 2.6E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS09010 74621a36db0c4df9f2dcd338bfa0ee0f 674 Gene3D G3DSA:3.50.50.60 571 652 2.6E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS09010 74621a36db0c4df9f2dcd338bfa0ee0f 674 Gene3D G3DSA:3.50.50.60 388 471 2.6E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS09010 74621a36db0c4df9f2dcd338bfa0ee0f 674 Gene3D G3DSA:3.40.50.150 13 237 2.9E-79 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS09010 74621a36db0c4df9f2dcd338bfa0ee0f 674 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 6 655 23.521 T 23-04-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 RR42_RS09010 74621a36db0c4df9f2dcd338bfa0ee0f 674 Pfam PF01266 FAD dependent oxidoreductase 256 630 9.9E-39 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RR42_RS09010 74621a36db0c4df9f2dcd338bfa0ee0f 674 PANTHER PTHR13847:SF206 217 585 2.4E-29 T 23-04-2016 RR42_RS09010 74621a36db0c4df9f2dcd338bfa0ee0f 674 PANTHER PTHR13847:SF206 601 660 2.4E-29 T 23-04-2016 RR42_RS11675 61a890784161e2009b0b6a31a1a84569 298 SMART SM01400 3 118 1.7E-29 T 23-04-2016 RR42_RS11675 61a890784161e2009b0b6a31a1a84569 298 Gene3D G3DSA:3.40.50.2020 4 157 5.9E-27 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS11675 61a890784161e2009b0b6a31a1a84569 298 Gene3D G3DSA:3.40.50.2020 158 277 8.4E-19 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS11675 61a890784161e2009b0b6a31a1a84569 298 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 5 115 1.1E-15 T 23-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RR42_RS11675 61a890784161e2009b0b6a31a1a84569 298 Pfam PF00156 Phosphoribosyl transferase domain 145 261 1.3E-12 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RR42_RS11675 61a890784161e2009b0b6a31a1a84569 298 PANTHER PTHR10210:SF32 5 277 4.7E-42 T 23-04-2016 RR42_RS11675 61a890784161e2009b0b6a31a1a84569 298 PANTHER PTHR10210 5 277 4.7E-42 T 23-04-2016 RR42_RS11675 61a890784161e2009b0b6a31a1a84569 298 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 5 292 7.2E-52 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RR42_RS11675 61a890784161e2009b0b6a31a1a84569 298 SUPERFAMILY SSF53271 160 280 1.57E-22 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS11675 61a890784161e2009b0b6a31a1a84569 298 SUPERFAMILY SSF53271 5 158 1.63E-32 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS03725 0f81b137a7c1da169c6bc0ba7a1fc176 339 SUPERFAMILY SSF143865 17 271 5.23E-38 T 23-04-2016 RR42_RS03725 0f81b137a7c1da169c6bc0ba7a1fc176 339 Pfam PF01544 CorA-like Mg2+ transporter protein 49 331 2.8E-54 T 23-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 RR42_RS03725 0f81b137a7c1da169c6bc0ba7a1fc176 339 PANTHER PTHR21535 77 335 8.4E-24 T 23-04-2016 RR42_RS03725 0f81b137a7c1da169c6bc0ba7a1fc176 339 SUPERFAMILY SSF144083 273 335 7.32E-16 T 23-04-2016 RR42_RS03725 0f81b137a7c1da169c6bc0ba7a1fc176 339 Gene3D G3DSA:1.20.58.340 264 335 1.3E-18 T 23-04-2016 RR42_RS03725 0f81b137a7c1da169c6bc0ba7a1fc176 339 Gene3D G3DSA:1.20.58.340 151 236 2.9E-4 T 23-04-2016 RR42_RS04890 f0132be8fdea6c9a1ee7265373ed7bb4 239 Gene3D G3DSA:3.30.230.70 9 234 1.1E-28 T 23-04-2016 IPR027408 PNPase/RNase PH domain RR42_RS04890 f0132be8fdea6c9a1ee7265373ed7bb4 239 Pfam PF03725 3' exoribonuclease family, domain 2 158 223 1.1E-9 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RR42_RS04890 f0132be8fdea6c9a1ee7265373ed7bb4 239 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 47.949 T 23-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 RR42_RS04890 f0132be8fdea6c9a1ee7265373ed7bb4 239 PANTHER PTHR11953 1 236 1.1E-75 T 23-04-2016 RR42_RS04890 f0132be8fdea6c9a1ee7265373ed7bb4 239 ProSitePatterns PS01277 Ribonuclease PH signature. 116 129 - T 23-04-2016 IPR018336 Ribonuclease PH, conserved site RR42_RS04890 f0132be8fdea6c9a1ee7265373ed7bb4 239 PANTHER PTHR11953:SF0 1 236 1.1E-75 T 23-04-2016 RR42_RS04890 f0132be8fdea6c9a1ee7265373ed7bb4 239 SUPERFAMILY SSF55666 154 236 3.53E-25 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RR42_RS04890 f0132be8fdea6c9a1ee7265373ed7bb4 239 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 1.3E-114 T 23-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 RR42_RS04890 f0132be8fdea6c9a1ee7265373ed7bb4 239 Pfam PF01138 3' exoribonuclease family, domain 1 11 140 1.8E-18 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 RR42_RS04890 f0132be8fdea6c9a1ee7265373ed7bb4 239 SUPERFAMILY SSF54211 1 181 3.04E-41 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RR42_RS20405 1de90816aa13ec84d4220692730399f0 327 Gene3D G3DSA:1.10.1040.10 200 319 2.9E-26 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RR42_RS20405 1de90816aa13ec84d4220692730399f0 327 SUPERFAMILY SSF51735 5 183 2.63E-16 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS20405 1de90816aa13ec84d4220692730399f0 327 SUPERFAMILY SSF48179 200 320 3.4E-28 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RR42_RS20405 1de90816aa13ec84d4220692730399f0 327 PANTHER PTHR21708:SF29 1 324 6.8E-80 T 23-04-2016 RR42_RS20405 1de90816aa13ec84d4220692730399f0 327 Pfam PF02558 Ketopantoate reductase PanE/ApbA 5 169 7.2E-21 T 23-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 RR42_RS20405 1de90816aa13ec84d4220692730399f0 327 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 200 319 5.6E-25 T 23-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 RR42_RS20405 1de90816aa13ec84d4220692730399f0 327 PANTHER PTHR21708 1 324 6.8E-80 T 23-04-2016 RR42_RS20405 1de90816aa13ec84d4220692730399f0 327 Gene3D G3DSA:3.40.50.720 3 197 7.4E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS06525 a460b87b12287b0421c283bb8d1246d6 202 PANTHER PTHR35011 38 184 1.8E-18 T 23-04-2016 RR42_RS06525 a460b87b12287b0421c283bb8d1246d6 202 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 51 182 1.4E-26 T 23-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RR42_RS06480 5f7102f004eede940da9909cf7856dbc 239 PANTHER PTHR12289:SF39 1 232 7.6E-79 T 23-04-2016 RR42_RS06480 5f7102f004eede940da9909cf7856dbc 239 SUPERFAMILY SSF52833 1 101 1.17E-9 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS06480 5f7102f004eede940da9909cf7856dbc 239 Gene3D G3DSA:3.40.30.10 15 74 3.2E-6 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS06480 5f7102f004eede940da9909cf7856dbc 239 Gene3D G3DSA:1.20.1050.10 165 228 7.0E-7 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS06480 5f7102f004eede940da9909cf7856dbc 239 SUPERFAMILY SSF47616 160 228 5.12E-8 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS06480 5f7102f004eede940da9909cf7856dbc 239 PANTHER PTHR12289 1 232 7.6E-79 T 23-04-2016 RR42_RS06480 5f7102f004eede940da9909cf7856dbc 239 Pfam PF17171 Glutathione S-transferase, C-terminal domain 165 225 1.5E-15 T 23-04-2016 IPR033468 Metaxin, glutathione S-transferase domain RR42_RS06480 5f7102f004eede940da9909cf7856dbc 239 Pfam PF17172 Glutathione S-transferase N-terminal domain 18 114 3.6E-23 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS09295 72413b860ec931bb55a2dc89add9480b 234 Gene3D G3DSA:3.40.50.1820 28 229 8.9E-49 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS09295 72413b860ec931bb55a2dc89add9480b 234 Pfam PF02230 Phospholipase/Carboxylesterase 33 228 2.0E-16 T 23-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 RR42_RS09295 72413b860ec931bb55a2dc89add9480b 234 PANTHER PTHR10655 38 228 1.7E-23 T 23-04-2016 RR42_RS09295 72413b860ec931bb55a2dc89add9480b 234 SUPERFAMILY SSF53474 31 229 1.25E-38 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS04135 20626bf1e69180b9b997bdf243c5ebc5 282 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 276 3.9E-80 T 23-04-2016 IPR017592 Pilus assembly, Flp-type CpaB RR42_RS04135 20626bf1e69180b9b997bdf243c5ebc5 282 Pfam PF08666 SAF domain 38 98 1.6E-11 T 23-04-2016 IPR013974 SAF domain RR42_RS04135 20626bf1e69180b9b997bdf243c5ebc5 282 SMART SM00858 37 99 5.5E-13 T 23-04-2016 IPR013974 SAF domain RR42_RS04135 20626bf1e69180b9b997bdf243c5ebc5 282 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 105 213 9.3E-30 T 23-04-2016 IPR031571 Flp pilus assembly protein RcpC/CpaB domain RR42_RS17555 fcddcda94e304b99f2990242d69986c7 187 Pfam PF04355 SmpA / OmlA family 52 121 1.9E-26 T 23-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 RR42_RS17555 fcddcda94e304b99f2990242d69986c7 187 PANTHER PTHR37482 8 129 1.1E-28 T 23-04-2016 RR42_RS17555 fcddcda94e304b99f2990242d69986c7 187 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 13 143 29.356 T 23-04-2016 IPR026592 Outer membrane protein assembly factor BamE RR42_RS17555 fcddcda94e304b99f2990242d69986c7 187 PANTHER PTHR37482:SF1 8 129 1.1E-28 T 23-04-2016 RR42_RS15275 e9a8208ad779cce0a9c49315ec7ed8de 231 SUPERFAMILY SSF48403 40 227 1.09E-47 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain RR42_RS15275 e9a8208ad779cce0a9c49315ec7ed8de 231 Gene3D G3DSA:1.25.40.20 118 226 2.1E-31 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain RR42_RS15275 e9a8208ad779cce0a9c49315ec7ed8de 231 Gene3D G3DSA:1.25.40.20 40 117 1.2E-21 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain RR42_RS15275 e9a8208ad779cce0a9c49315ec7ed8de 231 PANTHER PTHR24198 40 227 7.0E-49 T 23-04-2016 RR42_RS15275 e9a8208ad779cce0a9c49315ec7ed8de 231 Pfam PF12796 Ankyrin repeats (3 copies) 40 99 6.4E-9 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain RR42_RS15275 e9a8208ad779cce0a9c49315ec7ed8de 231 Pfam PF12796 Ankyrin repeats (3 copies) 108 203 9.8E-15 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain RR42_RS15275 e9a8208ad779cce0a9c49315ec7ed8de 231 SMART SM00248 68 97 0.001 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 RR42_RS15275 e9a8208ad779cce0a9c49315ec7ed8de 231 SMART SM00248 101 130 0.076 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 RR42_RS15275 e9a8208ad779cce0a9c49315ec7ed8de 231 SMART SM00248 134 163 8.9E-4 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 RR42_RS15275 e9a8208ad779cce0a9c49315ec7ed8de 231 SMART SM00248 167 201 4.2 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 RR42_RS15275 e9a8208ad779cce0a9c49315ec7ed8de 231 SMART SM00248 34 64 1400.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 RR42_RS03175 56f36b7ea84149d7c827ba24dd82a99c 981 SUPERFAMILY SSF52540 711 957 3.29E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03175 56f36b7ea84149d7c827ba24dd82a99c 981 SUPERFAMILY SSF52540 489 710 3.15E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03175 56f36b7ea84149d7c827ba24dd82a99c 981 PANTHER PTHR10799 494 956 1.7E-162 T 23-04-2016 RR42_RS03175 56f36b7ea84149d7c827ba24dd82a99c 981 SMART SM00487 499 682 1.4E-24 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RR42_RS03175 56f36b7ea84149d7c827ba24dd82a99c 981 SMART SM00490 835 917 7.8E-21 T 23-04-2016 IPR001650 Helicase, C-terminal RR42_RS03175 56f36b7ea84149d7c827ba24dd82a99c 981 Pfam PF00271 Helicase conserved C-terminal domain 806 917 7.6E-18 T 23-04-2016 IPR001650 Helicase, C-terminal RR42_RS03175 56f36b7ea84149d7c827ba24dd82a99c 981 Gene3D G3DSA:3.40.50.300 495 668 3.7E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03175 56f36b7ea84149d7c827ba24dd82a99c 981 Pfam PF00176 SNF2 family N-terminal domain 519 791 5.9E-51 T 23-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 RR42_RS03175 56f36b7ea84149d7c827ba24dd82a99c 981 Gene3D G3DSA:3.40.50.300 804 946 7.0E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS15015 136aebc4812df51797dd87d9d2312e91 96 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 45 68 1.0E-5 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RR42_RS15015 136aebc4812df51797dd87d9d2312e91 96 Pfam PF02609 Exonuclease VII small subunit 28 78 3.2E-21 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RR42_RS15015 136aebc4812df51797dd87d9d2312e91 96 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 27 87 14.817 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RR42_RS15015 136aebc4812df51797dd87d9d2312e91 96 PANTHER PTHR34137 15 80 4.3E-21 T 23-04-2016 RR42_RS15015 136aebc4812df51797dd87d9d2312e91 96 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 27 81 2.7E-22 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RR42_RS15015 136aebc4812df51797dd87d9d2312e91 96 Gene3D G3DSA:1.10.287.1040 24 87 5.5E-26 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RR42_RS15015 136aebc4812df51797dd87d9d2312e91 96 SUPERFAMILY SSF116842 22 88 3.79E-20 T 23-04-2016 RR42_RS19790 1b939eac56de8109b631663063d84a92 473 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 55 70 - T 23-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS19790 1b939eac56de8109b631663063d84a92 473 PRINTS PR00173 Glutamate-aspartate symporter signature 26 46 1.8E-26 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS19790 1b939eac56de8109b631663063d84a92 473 PRINTS PR00173 Glutamate-aspartate symporter signature 214 233 1.8E-26 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS19790 1b939eac56de8109b631663063d84a92 473 PRINTS PR00173 Glutamate-aspartate symporter signature 167 189 1.8E-26 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS19790 1b939eac56de8109b631663063d84a92 473 PRINTS PR00173 Glutamate-aspartate symporter signature 314 340 1.8E-26 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS19790 1b939eac56de8109b631663063d84a92 473 PRINTS PR00173 Glutamate-aspartate symporter signature 349 368 1.8E-26 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS19790 1b939eac56de8109b631663063d84a92 473 PRINTS PR00173 Glutamate-aspartate symporter signature 93 118 1.8E-26 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS19790 1b939eac56de8109b631663063d84a92 473 Gene3D G3DSA:1.10.3860.10 26 428 9.4E-108 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS19790 1b939eac56de8109b631663063d84a92 473 PANTHER PTHR11958 26 447 1.1E-224 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS19790 1b939eac56de8109b631663063d84a92 473 SUPERFAMILY SSF118215 28 424 2.35E-108 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS19790 1b939eac56de8109b631663063d84a92 473 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 317 340 - T 23-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS19790 1b939eac56de8109b631663063d84a92 473 Pfam PF00375 Sodium:dicarboxylate symporter family 28 423 2.3E-101 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS19790 1b939eac56de8109b631663063d84a92 473 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 21 450 36.396 T 23-04-2016 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 RR42_RS19790 1b939eac56de8109b631663063d84a92 473 PANTHER PTHR11958:SF47 26 447 1.1E-224 T 23-04-2016 RR42_RS13645 89fe329d992f0f9b47b0d19955b11c05 463 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RR42_RS13645 89fe329d992f0f9b47b0d19955b11c05 463 PANTHER PTHR24064 66 462 1.8E-82 T 23-04-2016 RR42_RS13645 89fe329d992f0f9b47b0d19955b11c05 463 Gene3D G3DSA:1.20.1250.20 273 459 4.5E-21 T 23-04-2016 RR42_RS13645 89fe329d992f0f9b47b0d19955b11c05 463 SUPERFAMILY SSF103473 24 461 2.09E-78 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS13645 89fe329d992f0f9b47b0d19955b11c05 463 Gene3D G3DSA:1.20.1250.20 39 220 2.5E-30 T 23-04-2016 RR42_RS13645 89fe329d992f0f9b47b0d19955b11c05 463 Pfam PF00083 Sugar (and other) transporter 72 462 3.4E-40 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RR42_RS05885 82f206e533c4a78ee086a4fba94f5949 1411 PANTHER PTHR38690 332 358 5.3E-107 T 23-04-2016 RR42_RS05885 82f206e533c4a78ee086a4fba94f5949 1411 PANTHER PTHR38690 21 315 5.3E-107 T 23-04-2016 RR42_RS05885 82f206e533c4a78ee086a4fba94f5949 1411 PANTHER PTHR38690 377 673 5.3E-107 T 23-04-2016 RR42_RS05885 82f206e533c4a78ee086a4fba94f5949 1411 PANTHER PTHR38690 691 1403 5.3E-107 T 23-04-2016 RR42_RS05885 82f206e533c4a78ee086a4fba94f5949 1411 Pfam PF13502 AsmA-like C-terminal region 1131 1384 6.9E-64 T 23-04-2016 IPR032712 AsmA-like, C-terminal RR42_RS05885 82f206e533c4a78ee086a4fba94f5949 1411 Pfam PF13116 Protein of unknown function 603 901 5.1E-47 T 23-04-2016 IPR025263 Domain of unknown function DUF3971 RR42_RS05885 82f206e533c4a78ee086a4fba94f5949 1411 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 35 1390 9.4E-190 T 23-04-2016 IPR011836 Conserved hypothetical protein CHP02099 RR42_RS02105 5a1ee8e7008243bdb49f2f164983697f 327 Gene3D G3DSA:3.40.50.10490 14 197 4.4E-53 T 23-04-2016 RR42_RS02105 5a1ee8e7008243bdb49f2f164983697f 327 PANTHER PTHR38418:SF1 1 320 1.7E-38 T 23-04-2016 RR42_RS02105 5a1ee8e7008243bdb49f2f164983697f 327 Gene3D G3DSA:3.10.580.10 198 324 7.6E-39 T 23-04-2016 RR42_RS02105 5a1ee8e7008243bdb49f2f164983697f 327 Pfam PF01380 SIS domain 44 175 2.8E-31 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RR42_RS02105 5a1ee8e7008243bdb49f2f164983697f 327 PANTHER PTHR38418 1 320 1.7E-38 T 23-04-2016 RR42_RS02105 5a1ee8e7008243bdb49f2f164983697f 327 Pfam PF00571 CBS domain 204 260 4.9E-7 T 23-04-2016 IPR000644 CBS domain RR42_RS02105 5a1ee8e7008243bdb49f2f164983697f 327 Pfam PF00571 CBS domain 271 324 4.0E-7 T 23-04-2016 IPR000644 CBS domain RR42_RS02105 5a1ee8e7008243bdb49f2f164983697f 327 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 48 317 5.8E-107 T 23-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 RR42_RS02105 5a1ee8e7008243bdb49f2f164983697f 327 PIRSF PIRSF004692 2 327 1.0E-132 T 23-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 RR42_RS02105 5a1ee8e7008243bdb49f2f164983697f 327 SMART SM00116 213 261 0.39 T 23-04-2016 IPR000644 CBS domain RR42_RS02105 5a1ee8e7008243bdb49f2f164983697f 327 SMART SM00116 278 326 0.54 T 23-04-2016 IPR000644 CBS domain RR42_RS02105 5a1ee8e7008243bdb49f2f164983697f 327 SUPERFAMILY SSF53697 11 324 9.57E-69 T 23-04-2016 RR42_RS12470 caee2f08c62fff7b69c9b076a0b401e1 515 SUPERFAMILY SSF56801 2 514 3.79E-149 T 23-04-2016 RR42_RS12470 caee2f08c62fff7b69c9b076a0b401e1 515 Pfam PF00501 AMP-binding enzyme 9 418 1.2E-95 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS12470 caee2f08c62fff7b69c9b076a0b401e1 515 Gene3D G3DSA:3.40.50.980 176 338 4.6E-34 T 23-04-2016 RR42_RS12470 caee2f08c62fff7b69c9b076a0b401e1 515 Gene3D G3DSA:2.30.38.10 339 409 8.2E-25 T 23-04-2016 RR42_RS12470 caee2f08c62fff7b69c9b076a0b401e1 515 PANTHER PTHR24096:SF240 1 511 1.1E-170 T 23-04-2016 RR42_RS12470 caee2f08c62fff7b69c9b076a0b401e1 515 ProSitePatterns PS00455 Putative AMP-binding domain signature. 170 181 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS12470 caee2f08c62fff7b69c9b076a0b401e1 515 Gene3D G3DSA:3.40.50.980 3 175 5.6E-37 T 23-04-2016 RR42_RS12470 caee2f08c62fff7b69c9b076a0b401e1 515 Gene3D G3DSA:3.30.300.30 413 512 4.8E-33 T 23-04-2016 RR42_RS12470 caee2f08c62fff7b69c9b076a0b401e1 515 Pfam PF13193 AMP-binding enzyme C-terminal domain 427 502 1.0E-20 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RR42_RS12470 caee2f08c62fff7b69c9b076a0b401e1 515 PANTHER PTHR24096 1 511 1.1E-170 T 23-04-2016 RR42_RS15150 756b1251d54eb911a7990ee1a1fcfe0f 874 SMART SM00863 653 695 2.1E-18 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RR42_RS15150 756b1251d54eb911a7990ee1a1fcfe0f 874 SUPERFAMILY SSF50447 453 552 4.32E-17 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RR42_RS15150 756b1251d54eb911a7990ee1a1fcfe0f 874 Gene3D G3DSA:3.30.930.10 1 247 8.9E-125 T 23-04-2016 RR42_RS15150 756b1251d54eb911a7990ee1a1fcfe0f 874 SUPERFAMILY SSF55681 2 251 1.79E-108 T 23-04-2016 RR42_RS15150 756b1251d54eb911a7990ee1a1fcfe0f 874 SUPERFAMILY SSF55186 552 707 6.28E-49 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 RR42_RS15150 756b1251d54eb911a7990ee1a1fcfe0f 874 PANTHER PTHR11777 1 874 0.0 T 23-04-2016 RR42_RS15150 756b1251d54eb911a7990ee1a1fcfe0f 874 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 874 204.84 T 23-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 RR42_RS15150 756b1251d54eb911a7990ee1a1fcfe0f 874 PANTHER PTHR11777:SF9 1 874 0.0 T 23-04-2016 RR42_RS15150 756b1251d54eb911a7990ee1a1fcfe0f 874 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 695 1.2E-16 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RR42_RS15150 756b1251d54eb911a7990ee1a1fcfe0f 874 SUPERFAMILY SSF101353 252 452 8.89E-61 T 23-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RR42_RS15150 756b1251d54eb911a7990ee1a1fcfe0f 874 Pfam PF01411 tRNA synthetases class II (A) 5 556 3.2E-218 T 23-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 RR42_RS15150 756b1251d54eb911a7990ee1a1fcfe0f 874 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 853 0.0 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RR42_RS15150 756b1251d54eb911a7990ee1a1fcfe0f 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 205 216 1.3E-32 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RR42_RS15150 756b1251d54eb911a7990ee1a1fcfe0f 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 278 294 1.3E-32 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RR42_RS15150 756b1251d54eb911a7990ee1a1fcfe0f 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 302 315 1.3E-32 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RR42_RS15150 756b1251d54eb911a7990ee1a1fcfe0f 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 232 245 1.3E-32 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RR42_RS15150 756b1251d54eb911a7990ee1a1fcfe0f 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 1.3E-32 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RR42_RS15150 756b1251d54eb911a7990ee1a1fcfe0f 874 Pfam PF02272 DHHA1 domain 801 865 6.0E-15 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 RR42_RS13245 37ab7391227a6772e8b7a75387ffd834 348 Pfam PF13379 NMT1-like family 33 266 7.1E-29 T 23-04-2016 RR42_RS13245 37ab7391227a6772e8b7a75387ffd834 348 SUPERFAMILY SSF53850 37 289 8.53E-48 T 23-04-2016 RR42_RS13245 37ab7391227a6772e8b7a75387ffd834 348 PANTHER PTHR30024:SF8 1 278 2.9E-61 T 23-04-2016 RR42_RS13245 37ab7391227a6772e8b7a75387ffd834 348 Gene3D G3DSA:3.40.190.10 56 141 3.2E-5 T 23-04-2016 RR42_RS13245 37ab7391227a6772e8b7a75387ffd834 348 SMART SM00062 38 279 0.0019 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RR42_RS13245 37ab7391227a6772e8b7a75387ffd834 348 Gene3D G3DSA:3.40.190.10 142 256 1.9E-23 T 23-04-2016 RR42_RS13245 37ab7391227a6772e8b7a75387ffd834 348 PANTHER PTHR30024 1 278 2.9E-61 T 23-04-2016 RR42_RS32195 7855f93ee465e782214aa518ec8f62d2 71 Gene3D G3DSA:2.40.160.50 8 70 3.9E-14 T 23-04-2016 RR42_RS10510 174c55b7a05898db1e1ee05e666b2766 317 Gene3D G3DSA:3.40.50.720 2 114 3.1E-28 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10510 174c55b7a05898db1e1ee05e666b2766 317 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 284 1.2E-39 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RR42_RS10510 174c55b7a05898db1e1ee05e666b2766 317 SUPERFAMILY SSF51735 101 285 6.66E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10510 174c55b7a05898db1e1ee05e666b2766 317 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 151 178 - T 23-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RR42_RS10510 174c55b7a05898db1e1ee05e666b2766 317 PANTHER PTHR10996 2 311 5.7E-87 T 23-04-2016 RR42_RS10510 174c55b7a05898db1e1ee05e666b2766 317 PANTHER PTHR10996:SF152 2 311 5.7E-87 T 23-04-2016 RR42_RS10510 174c55b7a05898db1e1ee05e666b2766 317 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 39 312 1.7E-21 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RR42_RS10510 174c55b7a05898db1e1ee05e666b2766 317 Gene3D G3DSA:3.40.50.720 115 287 3.0E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10510 174c55b7a05898db1e1ee05e666b2766 317 SUPERFAMILY SSF52283 1 134 5.67E-31 T 23-04-2016 RR42_RS01790 a5e8f2ec8f19c35222c63052e2549061 89 SUPERFAMILY SSF55594 1 87 8.11E-29 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like RR42_RS01790 a5e8f2ec8f19c35222c63052e2549061 89 PANTHER PTHR33705:SF2 1 89 1.0E-37 T 23-04-2016 RR42_RS01790 a5e8f2ec8f19c35222c63052e2549061 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 23-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RR42_RS01790 a5e8f2ec8f19c35222c63052e2549061 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 23-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site RR42_RS01790 a5e8f2ec8f19c35222c63052e2549061 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 9.6E-32 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like RR42_RS01790 a5e8f2ec8f19c35222c63052e2549061 89 Gene3D G3DSA:3.30.1340.10 1 87 2.5E-30 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like RR42_RS01790 a5e8f2ec8f19c35222c63052e2549061 89 PANTHER PTHR33705 1 89 1.0E-37 T 23-04-2016 RR42_RS01790 a5e8f2ec8f19c35222c63052e2549061 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.6E-16 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like RR42_RS01790 a5e8f2ec8f19c35222c63052e2549061 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.6E-16 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like RR42_RS01790 a5e8f2ec8f19c35222c63052e2549061 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.6E-16 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like RR42_RS01790 a5e8f2ec8f19c35222c63052e2549061 89 Pfam PF00381 PTS HPr component phosphorylation site 3 82 6.2E-26 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like RR42_RS08810 b3d214ffb935a5597e3a3163cbd360bf 234 PANTHER PTHR30598 3 217 1.5E-34 T 23-04-2016 RR42_RS08810 b3d214ffb935a5597e3a3163cbd360bf 234 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 8 161 1.2E-32 T 23-04-2016 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 RR42_RS08810 b3d214ffb935a5597e3a3163cbd360bf 234 Pfam PF02613 Nitrate reductase delta subunit 31 159 4.6E-13 T 23-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RR42_RS08810 b3d214ffb935a5597e3a3163cbd360bf 234 Gene3D G3DSA:1.10.3480.10 3 136 2.0E-10 T 23-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RR42_RS08810 b3d214ffb935a5597e3a3163cbd360bf 234 SUPERFAMILY SSF89155 3 164 2.49E-33 T 23-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RR42_RS08810 b3d214ffb935a5597e3a3163cbd360bf 234 PANTHER PTHR30598:SF1 3 217 1.5E-34 T 23-04-2016 RR42_RS11235 ebab04bf4ebf6540f4e1beae8fda9399 330 SMART SM00382 47 239 1.0E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS11235 ebab04bf4ebf6540f4e1beae8fda9399 330 Gene3D G3DSA:3.40.50.300 10 263 1.1E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11235 ebab04bf4ebf6540f4e1beae8fda9399 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 239 329 2.0E-26 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RR42_RS11235 ebab04bf4ebf6540f4e1beae8fda9399 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 306 9.5E-17 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RR42_RS11235 ebab04bf4ebf6540f4e1beae8fda9399 330 PANTHER PTHR24220:SF336 13 329 8.0E-156 T 23-04-2016 RR42_RS11235 ebab04bf4ebf6540f4e1beae8fda9399 330 PANTHER PTHR24220 13 329 8.0E-156 T 23-04-2016 RR42_RS11235 ebab04bf4ebf6540f4e1beae8fda9399 330 SUPERFAMILY SSF52540 12 260 3.03E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11235 ebab04bf4ebf6540f4e1beae8fda9399 330 Pfam PF00005 ABC transporter 39 189 2.9E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS11235 ebab04bf4ebf6540f4e1beae8fda9399 330 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS04245 4d9e0b927b9b5b80ce7663ccaf804185 164 SMART SM00448 35 148 3.6E-35 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS04245 4d9e0b927b9b5b80ce7663ccaf804185 164 PANTHER PTHR26402 35 152 5.1E-60 T 23-04-2016 RR42_RS04245 4d9e0b927b9b5b80ce7663ccaf804185 164 PANTHER PTHR26402:SF568 35 152 5.1E-60 T 23-04-2016 RR42_RS04245 4d9e0b927b9b5b80ce7663ccaf804185 164 SUPERFAMILY SSF52172 34 156 1.14E-36 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS04245 4d9e0b927b9b5b80ce7663ccaf804185 164 Gene3D G3DSA:3.40.50.2300 33 156 7.7E-36 T 23-04-2016 RR42_RS04245 4d9e0b927b9b5b80ce7663ccaf804185 164 Pfam PF00072 Response regulator receiver domain 37 148 2.5E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS15390 7d43dff91734d2a93240bb0f996f0a8b 291 TIGRFAM TIGR03036 trp_2_3_diox: tryptophan 2,3-dioxygenase 28 291 1.9E-137 T 23-04-2016 IPR017485 Tryptophan 2,3-dioxygenase, bacterial GO:0004833|GO:0019441 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 RR42_RS15390 7d43dff91734d2a93240bb0f996f0a8b 291 Pfam PF03301 Tryptophan 2,3-dioxygenase 24 217 4.7E-43 T 23-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 RR42_RS15390 7d43dff91734d2a93240bb0f996f0a8b 291 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 28 291 41.169 T 23-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 RR42_RS15390 7d43dff91734d2a93240bb0f996f0a8b 291 PANTHER PTHR10138 6 291 1.3E-102 T 23-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 RR42_RS15390 7d43dff91734d2a93240bb0f996f0a8b 291 PANTHER PTHR10138:SF0 6 291 1.3E-102 T 23-04-2016 RR42_RS15390 7d43dff91734d2a93240bb0f996f0a8b 291 SUPERFAMILY SSF140959 34 290 1.22E-102 T 23-04-2016 RR42_RS02480 b73ca10769c1630d1500d154408a93a6 294 PANTHER PTHR30537 1 293 1.6E-96 T 23-04-2016 RR42_RS02480 b73ca10769c1630d1500d154408a93a6 294 Gene3D G3DSA:1.10.10.10 3 82 1.6E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS02480 b73ca10769c1630d1500d154408a93a6 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 8.4E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS02480 b73ca10769c1630d1500d154408a93a6 294 PANTHER PTHR30537:SF5 1 293 1.6E-96 T 23-04-2016 RR42_RS02480 b73ca10769c1630d1500d154408a93a6 294 SUPERFAMILY SSF53850 88 293 9.59E-39 T 23-04-2016 RR42_RS02480 b73ca10769c1630d1500d154408a93a6 294 Gene3D G3DSA:3.40.190.10 83 176 4.9E-9 T 23-04-2016 RR42_RS02480 b73ca10769c1630d1500d154408a93a6 294 Pfam PF03466 LysR substrate binding domain 88 292 7.3E-39 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS02480 b73ca10769c1630d1500d154408a93a6 294 Gene3D G3DSA:3.40.190.10 177 259 2.4E-21 T 23-04-2016 RR42_RS02480 b73ca10769c1630d1500d154408a93a6 294 SUPERFAMILY SSF46785 4 87 1.2E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS01095 ba717066ab180ba566f81a45cbb79760 159 Pfam PF04314 Protein of unknown function (DUF461) 28 133 1.4E-35 T 23-04-2016 IPR007410 DR1885-like metal-binding protein RR42_RS01095 ba717066ab180ba566f81a45cbb79760 159 PANTHER PTHR36302 5 156 1.7E-27 T 23-04-2016 RR42_RS01095 ba717066ab180ba566f81a45cbb79760 159 PANTHER PTHR36302:SF1 5 156 1.7E-27 T 23-04-2016 RR42_RS01095 ba717066ab180ba566f81a45cbb79760 159 SUPERFAMILY SSF110087 5 135 1.31E-42 T 23-04-2016 IPR007410 DR1885-like metal-binding protein RR42_RS15655 9e3e9fb4f2e0f1c710913e3856d20727 1068 SUPERFAMILY SSF82693 40 134 1.22E-24 T 23-04-2016 RR42_RS15655 9e3e9fb4f2e0f1c710913e3856d20727 1068 Gene3D G3DSA:1.10.3850.10 812 1031 1.4E-62 T 23-04-2016 RR42_RS15655 9e3e9fb4f2e0f1c710913e3856d20727 1068 Pfam PF00873 AcrB/AcrD/AcrF family 4 1030 1.1E-268 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS15655 9e3e9fb4f2e0f1c710913e3856d20727 1068 PANTHER PTHR32063 1 1047 0.0 T 23-04-2016 RR42_RS15655 9e3e9fb4f2e0f1c710913e3856d20727 1068 Gene3D G3DSA:3.30.2090.10 714 803 1.4E-9 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS15655 9e3e9fb4f2e0f1c710913e3856d20727 1068 SUPERFAMILY SSF82714 714 806 6.41E-10 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS15655 9e3e9fb4f2e0f1c710913e3856d20727 1068 Gene3D G3DSA:3.30.70.1430 571 664 1.6E-8 T 23-04-2016 RR42_RS15655 9e3e9fb4f2e0f1c710913e3856d20727 1068 PANTHER PTHR32063:SF0 1 1047 0.0 T 23-04-2016 RR42_RS15655 9e3e9fb4f2e0f1c710913e3856d20727 1068 SUPERFAMILY SSF82866 806 1033 1.44E-46 T 23-04-2016 RR42_RS15655 9e3e9fb4f2e0f1c710913e3856d20727 1068 SUPERFAMILY SSF82866 292 492 1.44E-46 T 23-04-2016 RR42_RS15655 9e3e9fb4f2e0f1c710913e3856d20727 1068 SUPERFAMILY SSF82714 186 267 1.05E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS15655 9e3e9fb4f2e0f1c710913e3856d20727 1068 SUPERFAMILY SSF82693 569 667 3.92E-11 T 23-04-2016 RR42_RS15655 9e3e9fb4f2e0f1c710913e3856d20727 1068 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 2.7E-63 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS15655 9e3e9fb4f2e0f1c710913e3856d20727 1068 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 2.7E-63 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS15655 9e3e9fb4f2e0f1c710913e3856d20727 1068 PRINTS PR00702 Acriflavin resistance protein family signature 555 572 2.7E-63 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS15655 9e3e9fb4f2e0f1c710913e3856d20727 1068 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 2.7E-63 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS15655 9e3e9fb4f2e0f1c710913e3856d20727 1068 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.7E-63 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS15655 9e3e9fb4f2e0f1c710913e3856d20727 1068 PRINTS PR00702 Acriflavin resistance protein family signature 359 380 2.7E-63 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS15655 9e3e9fb4f2e0f1c710913e3856d20727 1068 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 2.7E-63 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS15655 9e3e9fb4f2e0f1c710913e3856d20727 1068 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.7E-63 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS15655 9e3e9fb4f2e0f1c710913e3856d20727 1068 SUPERFAMILY SSF82693 146 184 4.97E-17 T 23-04-2016 RR42_RS15655 9e3e9fb4f2e0f1c710913e3856d20727 1068 SUPERFAMILY SSF82693 270 324 4.97E-17 T 23-04-2016 RR42_RS15655 9e3e9fb4f2e0f1c710913e3856d20727 1068 Gene3D G3DSA:1.20.1640.10 287 495 5.6E-55 T 23-04-2016 RR42_RS15655 9e3e9fb4f2e0f1c710913e3856d20727 1068 Gene3D G3DSA:3.30.2090.10 185 269 9.6E-16 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS15655 9e3e9fb4f2e0f1c710913e3856d20727 1068 Gene3D G3DSA:3.30.70.1430 40 141 1.8E-27 T 23-04-2016 RR42_RS06450 d669aa323ec5233ec626c4b06a5705bd 457 PANTHER PTHR30213:SF0 10 420 4.5E-84 T 23-04-2016 RR42_RS06450 d669aa323ec5233ec626c4b06a5705bd 457 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 27 277 2.1E-66 T 23-04-2016 IPR017039 Virulence factor BrkB RR42_RS06450 d669aa323ec5233ec626c4b06a5705bd 457 PANTHER PTHR30213 10 420 4.5E-84 T 23-04-2016 RR42_RS06450 d669aa323ec5233ec626c4b06a5705bd 457 Pfam PF03631 Virulence factor BrkB 32 277 1.1E-54 T 23-04-2016 IPR017039 Virulence factor BrkB RR42_RS06450 d669aa323ec5233ec626c4b06a5705bd 457 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 7 308 22.951 T 23-04-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial RR42_RS04015 c979dff2cfd94a13eae22d594dcd4d68 232 Pfam PF04542 Sigma-70 region 2 13 77 4.9E-14 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS04015 c979dff2cfd94a13eae22d594dcd4d68 232 Gene3D G3DSA:1.10.10.10 114 175 2.1E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS04015 c979dff2cfd94a13eae22d594dcd4d68 232 Pfam PF08281 Sigma-70, region 4 121 172 1.3E-12 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS04015 c979dff2cfd94a13eae22d594dcd4d68 232 PANTHER PTHR30173 7 176 1.2E-31 T 23-04-2016 RR42_RS04015 c979dff2cfd94a13eae22d594dcd4d68 232 Gene3D G3DSA:1.10.1740.10 5 95 3.9E-19 T 23-04-2016 RR42_RS04015 c979dff2cfd94a13eae22d594dcd4d68 232 SUPERFAMILY SSF88659 113 174 3.27E-14 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS04015 c979dff2cfd94a13eae22d594dcd4d68 232 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 173 3.7E-22 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS04015 c979dff2cfd94a13eae22d594dcd4d68 232 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 35 65 - T 23-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS04015 c979dff2cfd94a13eae22d594dcd4d68 232 SUPERFAMILY SSF88946 5 78 1.88E-17 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS32685 f4badd965d42c44e4d927f7860171245 331 PANTHER PTHR24221 3 331 2.8E-73 T 23-04-2016 RR42_RS32685 f4badd965d42c44e4d927f7860171245 331 Gene3D G3DSA:3.40.50.300 281 331 6.3E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS32685 f4badd965d42c44e4d927f7860171245 331 Gene3D G3DSA:1.20.1560.10 3 271 8.3E-63 T 23-04-2016 RR42_RS32685 f4badd965d42c44e4d927f7860171245 331 Pfam PF00005 ABC transporter 305 331 6.5E-7 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS32685 f4badd965d42c44e4d927f7860171245 331 Pfam PF00664 ABC transporter transmembrane region 6 238 2.8E-40 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RR42_RS32685 f4badd965d42c44e4d927f7860171245 331 SUPERFAMILY SSF90123 2 271 7.06E-55 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RR42_RS32685 f4badd965d42c44e4d927f7860171245 331 SUPERFAMILY SSF52540 274 331 7.42E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20335 03816b252800060c2125c0e57490e974 161 PANTHER PTHR23501:SF7 1 132 7.2E-23 T 23-04-2016 RR42_RS20335 03816b252800060c2125c0e57490e974 161 SUPERFAMILY SSF103473 7 134 5.36E-12 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS20335 03816b252800060c2125c0e57490e974 161 PANTHER PTHR23501 1 132 7.2E-23 T 23-04-2016 RR42_RS03195 cd3ed34d4d4e78abc271c296c1bb28ea 375 SUPERFAMILY SSF46894 284 361 7.48E-11 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS03195 cd3ed34d4d4e78abc271c296c1bb28ea 375 Gene3D G3DSA:1.10.10.10 299 361 6.0E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS03195 cd3ed34d4d4e78abc271c296c1bb28ea 375 SMART SM00421 300 357 4.5E-4 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS04905 d6f5ccfd5efd3de0b706dc7f17d256c7 313 PANTHER PTHR30636 1 313 1.7E-79 T 23-04-2016 RR42_RS04905 d6f5ccfd5efd3de0b706dc7f17d256c7 313 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 313 7.0E-70 T 23-04-2016 IPR005229 Conserved hypothetical protein CHP00255 RR42_RS04905 d6f5ccfd5efd3de0b706dc7f17d256c7 313 Pfam PF03755 YicC-like family, N-terminal region 2 167 1.1E-39 T 23-04-2016 IPR013527 YicC-like, N-terminal RR42_RS04905 d6f5ccfd5efd3de0b706dc7f17d256c7 313 Pfam PF08340 Domain of unknown function (DUF1732) 229 313 1.7E-32 T 23-04-2016 IPR013551 Domain of unknown function DUF1732 RR42_RS11880 d2efa76414514cf3287331962547102a 272 PANTHER PTHR10804:SF75 1 254 1.2E-140 T 23-04-2016 RR42_RS11880 d2efa76414514cf3287331962547102a 272 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 254 1.1E-93 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RR42_RS11880 d2efa76414514cf3287331962547102a 272 Hamap MF_01974 Methionine aminopeptidase [map]. 3 256 40.687 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RR42_RS11880 d2efa76414514cf3287331962547102a 272 Gene3D G3DSA:3.90.230.10 3 255 2.5E-94 T 23-04-2016 IPR000994 Peptidase M24, structural domain RR42_RS11880 d2efa76414514cf3287331962547102a 272 PANTHER PTHR10804 1 254 1.2E-140 T 23-04-2016 RR42_RS11880 d2efa76414514cf3287331962547102a 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 198 210 5.6E-14 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RR42_RS11880 d2efa76414514cf3287331962547102a 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 167 179 5.6E-14 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RR42_RS11880 d2efa76414514cf3287331962547102a 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 74 87 5.6E-14 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RR42_RS11880 d2efa76414514cf3287331962547102a 272 SUPERFAMILY SSF55920 4 255 7.07E-87 T 23-04-2016 IPR000994 Peptidase M24, structural domain RR42_RS11880 d2efa76414514cf3287331962547102a 272 Pfam PF00557 Metallopeptidase family M24 13 247 1.5E-51 T 23-04-2016 IPR000994 Peptidase M24, structural domain RR42_RS11880 d2efa76414514cf3287331962547102a 272 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 173 191 - T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RR42_RS14740 26be2835ffc6f72136ba7534353ef185 264 Pfam PF00303 Thymidylate synthase 2 264 5.2E-123 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RR42_RS14740 26be2835ffc6f72136ba7534353ef185 264 SUPERFAMILY SSF55831 1 264 1.44E-128 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RR42_RS14740 26be2835ffc6f72136ba7534353ef185 264 PANTHER PTHR11548 1 264 4.2E-191 T 23-04-2016 RR42_RS14740 26be2835ffc6f72136ba7534353ef185 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 264 5.3E-94 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RR42_RS14740 26be2835ffc6f72136ba7534353ef185 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 84 7.3E-42 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RR42_RS14740 26be2835ffc6f72136ba7534353ef185 264 Gene3D G3DSA:3.30.572.10 1 264 2.8E-133 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RR42_RS14740 26be2835ffc6f72136ba7534353ef185 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 7.9E-47 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RR42_RS14740 26be2835ffc6f72136ba7534353ef185 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 7.9E-47 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RR42_RS14740 26be2835ffc6f72136ba7534353ef185 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 7.9E-47 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RR42_RS14740 26be2835ffc6f72136ba7534353ef185 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 7.9E-47 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RR42_RS14740 26be2835ffc6f72136ba7534353ef185 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 7.9E-47 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RR42_RS14740 26be2835ffc6f72136ba7534353ef185 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 45.381 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RR42_RS14740 26be2835ffc6f72136ba7534353ef185 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 23-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RR42_RS13255 86be3c9cd3092af5431f2f6bf0783d75 322 SUPERFAMILY SSF51569 9 302 2.2E-72 T 23-04-2016 RR42_RS13255 86be3c9cd3092af5431f2f6bf0783d75 322 PANTHER PTHR10277 1 302 2.0E-115 T 23-04-2016 RR42_RS13255 86be3c9cd3092af5431f2f6bf0783d75 322 Pfam PF00682 HMGL-like 13 282 1.5E-44 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RR42_RS13255 86be3c9cd3092af5431f2f6bf0783d75 322 PANTHER PTHR10277:SF1 1 302 2.0E-115 T 23-04-2016 RR42_RS13255 86be3c9cd3092af5431f2f6bf0783d75 322 Gene3D G3DSA:3.20.20.70 12 293 2.2E-67 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS20140 091b990921ddcac71b8b23e9b399b86b 318 PANTHER PTHR23024 65 318 2.6E-69 T 23-04-2016 RR42_RS20140 091b990921ddcac71b8b23e9b399b86b 318 Gene3D G3DSA:3.40.50.1820 4 314 3.5E-78 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS20140 091b990921ddcac71b8b23e9b399b86b 318 SUPERFAMILY SSF53474 24 313 3.72E-62 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS20140 091b990921ddcac71b8b23e9b399b86b 318 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 151 163 - T 23-04-2016 IPR033140 Lipase, GDXG, putative serine active site RR42_RS20140 091b990921ddcac71b8b23e9b399b86b 318 Pfam PF07859 alpha/beta hydrolase fold 79 291 6.5E-62 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RR42_RS20140 091b990921ddcac71b8b23e9b399b86b 318 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 79 95 - T 23-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 RR42_RS37525 d389fe85d6f2cce82adb32c6e8c02b6b 156 PANTHER PTHR23100 1 154 5.3E-75 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RR42_RS37525 d389fe85d6f2cce82adb32c6e8c02b6b 156 Pfam PF01960 ArgJ family 2 155 3.3E-60 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RR42_RS37525 d389fe85d6f2cce82adb32c6e8c02b6b 156 SUPERFAMILY SSF56266 3 155 5.49E-57 T 23-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RR42_RS37525 d389fe85d6f2cce82adb32c6e8c02b6b 156 PANTHER PTHR23100:SF0 1 154 5.3E-75 T 23-04-2016 RR42_RS37525 d389fe85d6f2cce82adb32c6e8c02b6b 156 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 156 67.947 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RR42_RS37525 d389fe85d6f2cce82adb32c6e8c02b6b 156 Gene3D G3DSA:3.60.70.12 4 117 2.9E-44 T 23-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RR42_RS37525 d389fe85d6f2cce82adb32c6e8c02b6b 156 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 1 156 6.0E-73 T 23-04-2016 RR42_RS20725 676b1caa7fab3e36ba7f725f49227d91 320 PANTHER PTHR10992 47 319 2.0E-56 T 23-04-2016 RR42_RS20725 676b1caa7fab3e36ba7f725f49227d91 320 PRINTS PR00412 Epoxide hydrolase signature 74 92 5.8E-6 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS20725 676b1caa7fab3e36ba7f725f49227d91 320 PRINTS PR00412 Epoxide hydrolase signature 143 156 5.8E-6 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS20725 676b1caa7fab3e36ba7f725f49227d91 320 PRINTS PR00412 Epoxide hydrolase signature 294 316 5.8E-6 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS20725 676b1caa7fab3e36ba7f725f49227d91 320 Pfam PF12697 Alpha/beta hydrolase family 70 311 9.7E-23 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS20725 676b1caa7fab3e36ba7f725f49227d91 320 PRINTS PR00111 Alpha/beta hydrolase fold signature 157 170 1.7E-15 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS20725 676b1caa7fab3e36ba7f725f49227d91 320 PRINTS PR00111 Alpha/beta hydrolase fold signature 263 277 1.7E-15 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS20725 676b1caa7fab3e36ba7f725f49227d91 320 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 108 1.7E-15 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS20725 676b1caa7fab3e36ba7f725f49227d91 320 PRINTS PR00111 Alpha/beta hydrolase fold signature 143 156 1.7E-15 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS20725 676b1caa7fab3e36ba7f725f49227d91 320 Gene3D G3DSA:3.40.50.1820 40 318 9.3E-67 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS20725 676b1caa7fab3e36ba7f725f49227d91 320 SUPERFAMILY SSF53474 45 318 2.2E-62 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS04595 4a8bb28600f279a757a5cef39c421e12 360 Pfam PF04055 Radical SAM superfamily 74 252 3.5E-16 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RR42_RS04595 4a8bb28600f279a757a5cef39c421e12 360 SMART SM00729 70 298 3.1E-8 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RR42_RS04595 4a8bb28600f279a757a5cef39c421e12 360 PANTHER PTHR11228 17 319 1.7E-94 T 23-04-2016 RR42_RS04595 4a8bb28600f279a757a5cef39c421e12 360 PANTHER PTHR11228:SF26 17 319 1.7E-94 T 23-04-2016 RR42_RS04595 4a8bb28600f279a757a5cef39c421e12 360 SUPERFAMILY SSF102114 56 280 1.7E-12 T 23-04-2016 RR42_RS04595 4a8bb28600f279a757a5cef39c421e12 360 Gene3D G3DSA:3.80.30.20 72 259 6.0E-9 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RR42_RS13115 715468f51260aa5988574e619ffdb801 79 PANTHER PTHR34772:SF1 2 75 3.0E-34 T 23-04-2016 RR42_RS13115 715468f51260aa5988574e619ffdb801 79 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 8 65 1.1E-28 T 23-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 RR42_RS13115 715468f51260aa5988574e619ffdb801 79 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 65 27.79 T 23-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 RR42_RS13115 715468f51260aa5988574e619ffdb801 79 PANTHER PTHR34772 2 75 3.0E-34 T 23-04-2016 RR42_RS13115 715468f51260aa5988574e619ffdb801 79 Gene3D G3DSA:2.30.30.100 2 70 9.7E-37 T 23-04-2016 RR42_RS13115 715468f51260aa5988574e619ffdb801 79 SUPERFAMILY SSF50182 8 70 1.34E-23 T 23-04-2016 IPR010920 LSM domain RR42_RS09200 6348051951eef1b8715c73630a388419 533 SUPERFAMILY SSF81442 77 520 4.32E-97 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS09200 6348051951eef1b8715c73630a388419 533 PANTHER PTHR10422:SF21 59 500 1.3E-48 T 23-04-2016 RR42_RS09200 6348051951eef1b8715c73630a388419 533 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 80 492 3.2E-78 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS09200 6348051951eef1b8715c73630a388419 533 PANTHER PTHR10422 59 500 1.3E-48 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS09200 6348051951eef1b8715c73630a388419 533 Gene3D G3DSA:1.20.210.10 75 511 3.9E-42 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS03985 78461ac0773bc4303c0dc7864da94236 638 SUPERFAMILY SSF103190 79 213 1.7E-13 T 23-04-2016 IPR029151 Periplasmic sensor domain-like RR42_RS03985 78461ac0773bc4303c0dc7864da94236 638 SMART SM00388 407 475 5.1E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS03985 78461ac0773bc4303c0dc7864da94236 638 SUPERFAMILY SSF47384 404 472 1.33E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS03985 78461ac0773bc4303c0dc7864da94236 638 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 586 5.9E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS03985 78461ac0773bc4303c0dc7864da94236 638 PRINTS PR00344 Bacterial sensor protein C-terminal signature 558 572 5.9E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS03985 78461ac0773bc4303c0dc7864da94236 638 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 626 5.9E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS03985 78461ac0773bc4303c0dc7864da94236 638 PRINTS PR00344 Bacterial sensor protein C-terminal signature 589 607 5.9E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS03985 78461ac0773bc4303c0dc7864da94236 638 SUPERFAMILY SSF55874 482 629 5.11E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS03985 78461ac0773bc4303c0dc7864da94236 638 SMART SM00387 519 629 1.0E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS03985 78461ac0773bc4303c0dc7864da94236 638 Gene3D G3DSA:3.30.565.10 484 629 1.6E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS03985 78461ac0773bc4303c0dc7864da94236 638 PANTHER PTHR24423:SF451 107 146 7.0E-79 T 23-04-2016 RR42_RS03985 78461ac0773bc4303c0dc7864da94236 638 PANTHER PTHR24423:SF451 384 626 7.0E-79 T 23-04-2016 RR42_RS03985 78461ac0773bc4303c0dc7864da94236 638 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 520 628 5.0E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS03985 78461ac0773bc4303c0dc7864da94236 638 Pfam PF02743 Cache domain 63 255 1.0E-14 T 23-04-2016 IPR033479 Double Cache domain 1 RR42_RS03985 78461ac0773bc4303c0dc7864da94236 638 PIRSF PIRSF036431 14 636 6.6E-201 T 23-04-2016 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) RR42_RS03985 78461ac0773bc4303c0dc7864da94236 638 Gene3D G3DSA:1.10.287.130 406 471 9.4E-4 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS03985 78461ac0773bc4303c0dc7864da94236 638 Pfam PF00512 His Kinase A (phospho-acceptor) domain 409 472 1.5E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS03985 78461ac0773bc4303c0dc7864da94236 638 PANTHER PTHR24423 107 146 7.0E-79 T 23-04-2016 RR42_RS03985 78461ac0773bc4303c0dc7864da94236 638 PANTHER PTHR24423 384 626 7.0E-79 T 23-04-2016 RR42_RS03200 3c32beef04df48db01c887b1ece87799 402 PANTHER PTHR11406 1 401 2.1E-188 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RR42_RS03200 3c32beef04df48db01c887b1ece87799 402 Gene3D G3DSA:3.40.50.1260 11 184 2.5E-66 T 23-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RR42_RS03200 3c32beef04df48db01c887b1ece87799 402 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 9 398 39.393 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RR42_RS03200 3c32beef04df48db01c887b1ece87799 402 Pfam PF00162 Phosphoglycerate kinase 14 388 8.4E-142 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RR42_RS03200 3c32beef04df48db01c887b1ece87799 402 PRINTS PR00477 Phosphoglycerate kinase family signature 351 362 8.7E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RR42_RS03200 3c32beef04df48db01c887b1ece87799 402 PRINTS PR00477 Phosphoglycerate kinase family signature 37 59 8.7E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RR42_RS03200 3c32beef04df48db01c887b1ece87799 402 PRINTS PR00477 Phosphoglycerate kinase family signature 196 215 8.7E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RR42_RS03200 3c32beef04df48db01c887b1ece87799 402 PRINTS PR00477 Phosphoglycerate kinase family signature 173 195 8.7E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RR42_RS03200 3c32beef04df48db01c887b1ece87799 402 PRINTS PR00477 Phosphoglycerate kinase family signature 374 391 8.7E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RR42_RS03200 3c32beef04df48db01c887b1ece87799 402 PRINTS PR00477 Phosphoglycerate kinase family signature 15 31 8.7E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RR42_RS03200 3c32beef04df48db01c887b1ece87799 402 PRINTS PR00477 Phosphoglycerate kinase family signature 114 129 8.7E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RR42_RS03200 3c32beef04df48db01c887b1ece87799 402 PRINTS PR00477 Phosphoglycerate kinase family signature 318 343 8.7E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RR42_RS03200 3c32beef04df48db01c887b1ece87799 402 PRINTS PR00477 Phosphoglycerate kinase family signature 142 164 8.7E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RR42_RS03200 3c32beef04df48db01c887b1ece87799 402 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 20 30 - T 23-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RR42_RS03200 3c32beef04df48db01c887b1ece87799 402 PIRSF PIRSF000724 3 401 5.3E-141 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RR42_RS03200 3c32beef04df48db01c887b1ece87799 402 Gene3D G3DSA:3.40.50.1270 185 386 9.9E-82 T 23-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RR42_RS03200 3c32beef04df48db01c887b1ece87799 402 SUPERFAMILY SSF53748 11 398 4.59E-143 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RR42_RS10405 43678435ed746293b2518bdc58a1a17f 281 SUPERFAMILY SSF46785 2 106 8.54E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS10405 43678435ed746293b2518bdc58a1a17f 281 Gene3D G3DSA:3.40.190.10 86 170 1.3E-19 T 23-04-2016 RR42_RS10405 43678435ed746293b2518bdc58a1a17f 281 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 56 1.4E-14 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS10405 43678435ed746293b2518bdc58a1a17f 281 Gene3D G3DSA:3.40.190.10 171 243 2.7E-9 T 23-04-2016 RR42_RS10405 43678435ed746293b2518bdc58a1a17f 281 Gene3D G3DSA:1.10.10.10 1 74 5.2E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS10405 43678435ed746293b2518bdc58a1a17f 281 PANTHER PTHR30537:SF5 1 271 1.4E-75 T 23-04-2016 RR42_RS10405 43678435ed746293b2518bdc58a1a17f 281 Pfam PF03466 LysR substrate binding domain 84 273 1.2E-34 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS10405 43678435ed746293b2518bdc58a1a17f 281 PANTHER PTHR30537 1 271 1.4E-75 T 23-04-2016 RR42_RS10405 43678435ed746293b2518bdc58a1a17f 281 SUPERFAMILY SSF53850 84 276 4.03E-37 T 23-04-2016 RR42_RS07360 716a2a2fdb8f9a688899fb25b3f9f585 862 SUPERFAMILY SSF47384 621 695 1.31E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS07360 716a2a2fdb8f9a688899fb25b3f9f585 862 Gene3D G3DSA:3.30.450.20 347 473 3.8E-25 T 23-04-2016 RR42_RS07360 716a2a2fdb8f9a688899fb25b3f9f585 862 SMART SM00387 740 857 3.9E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS07360 716a2a2fdb8f9a688899fb25b3f9f585 862 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 360 483 1.6E-27 T 23-04-2016 IPR000014 PAS domain RR42_RS07360 716a2a2fdb8f9a688899fb25b3f9f585 862 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 487 612 5.9E-6 T 23-04-2016 IPR000014 PAS domain RR42_RS07360 716a2a2fdb8f9a688899fb25b3f9f585 862 Gene3D G3DSA:3.30.450.20 474 604 7.1E-10 T 23-04-2016 RR42_RS07360 716a2a2fdb8f9a688899fb25b3f9f585 862 PANTHER PTHR24423 62 118 1.3E-75 T 23-04-2016 RR42_RS07360 716a2a2fdb8f9a688899fb25b3f9f585 862 PANTHER PTHR24423 626 858 1.3E-75 T 23-04-2016 RR42_RS07360 716a2a2fdb8f9a688899fb25b3f9f585 862 PANTHER PTHR24423 358 497 1.3E-75 T 23-04-2016 RR42_RS07360 716a2a2fdb8f9a688899fb25b3f9f585 862 SUPERFAMILY SSF55874 688 855 3.01E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS07360 716a2a2fdb8f9a688899fb25b3f9f585 862 SUPERFAMILY SSF55785 473 604 3.14E-9 T 23-04-2016 IPR000014 PAS domain RR42_RS07360 716a2a2fdb8f9a688899fb25b3f9f585 862 SMART SM00086 434 476 3.1E-6 T 23-04-2016 IPR001610 PAC motif RR42_RS07360 716a2a2fdb8f9a688899fb25b3f9f585 862 SMART SM00091 488 558 210.0 T 23-04-2016 IPR000014 PAS domain RR42_RS07360 716a2a2fdb8f9a688899fb25b3f9f585 862 SMART SM00091 360 427 1.7E-9 T 23-04-2016 IPR000014 PAS domain RR42_RS07360 716a2a2fdb8f9a688899fb25b3f9f585 862 SMART SM00388 628 698 3.8E-4 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS07360 716a2a2fdb8f9a688899fb25b3f9f585 862 Pfam PF13188 PAS domain 489 529 0.0082 T 23-04-2016 IPR000014 PAS domain RR42_RS07360 716a2a2fdb8f9a688899fb25b3f9f585 862 PRINTS PR00344 Bacterial sensor protein C-terminal signature 805 815 1.6E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS07360 716a2a2fdb8f9a688899fb25b3f9f585 862 PRINTS PR00344 Bacterial sensor protein C-terminal signature 816 834 1.6E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS07360 716a2a2fdb8f9a688899fb25b3f9f585 862 PRINTS PR00344 Bacterial sensor protein C-terminal signature 841 854 1.6E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS07360 716a2a2fdb8f9a688899fb25b3f9f585 862 PRINTS PR00344 Bacterial sensor protein C-terminal signature 787 801 1.6E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS07360 716a2a2fdb8f9a688899fb25b3f9f585 862 Gene3D G3DSA:3.30.565.10 698 856 1.4E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS07360 716a2a2fdb8f9a688899fb25b3f9f585 862 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 742 856 1.7E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS07360 716a2a2fdb8f9a688899fb25b3f9f585 862 Pfam PF00989 PAS fold 361 473 1.6E-18 T 23-04-2016 IPR013767 PAS fold GO:0006355 RR42_RS07360 716a2a2fdb8f9a688899fb25b3f9f585 862 SUPERFAMILY SSF55785 347 474 2.27E-25 T 23-04-2016 IPR000014 PAS domain RR42_RS14460 15011ebfd16ef357bca730a473fc5c0f 273 Gene3D G3DSA:3.40.1410.10 131 271 6.8E-43 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RR42_RS14460 15011ebfd16ef357bca730a473fc5c0f 273 PANTHER PTHR11751 141 164 8.2E-25 T 23-04-2016 RR42_RS14460 15011ebfd16ef357bca730a473fc5c0f 273 PANTHER PTHR11751 38 107 8.2E-25 T 23-04-2016 RR42_RS14460 15011ebfd16ef357bca730a473fc5c0f 273 Pfam PF00392 Bacterial regulatory proteins, gntR family 42 105 9.0E-23 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS14460 15011ebfd16ef357bca730a473fc5c0f 273 SMART SM00866 125 267 2.4E-32 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RR42_RS14460 15011ebfd16ef357bca730a473fc5c0f 273 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 65 79 2.4E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS14460 15011ebfd16ef357bca730a473fc5c0f 273 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 79 95 2.4E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS14460 15011ebfd16ef357bca730a473fc5c0f 273 SUPERFAMILY SSF64288 94 272 4.08E-37 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RR42_RS14460 15011ebfd16ef357bca730a473fc5c0f 273 SMART SM00345 46 105 6.8E-22 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS14460 15011ebfd16ef357bca730a473fc5c0f 273 Pfam PF07702 UTRA domain 132 266 1.5E-33 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RR42_RS14460 15011ebfd16ef357bca730a473fc5c0f 273 SUPERFAMILY SSF46785 40 109 9.5E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS14460 15011ebfd16ef357bca730a473fc5c0f 273 Gene3D G3DSA:1.10.10.10 40 109 1.0E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19805 784b8c8359bf14f2a14cb23e1947804f 258 PANTHER PTHR11941 4 255 1.9E-102 T 23-04-2016 RR42_RS19805 784b8c8359bf14f2a14cb23e1947804f 258 Gene3D G3DSA:1.10.12.10 201 258 7.4E-22 T 23-04-2016 IPR014748 Crontonase, C-terminal RR42_RS19805 784b8c8359bf14f2a14cb23e1947804f 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 257 8.0E-67 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RR42_RS19805 784b8c8359bf14f2a14cb23e1947804f 258 PANTHER PTHR11941:SF76 4 255 1.9E-102 T 23-04-2016 RR42_RS19805 784b8c8359bf14f2a14cb23e1947804f 258 SUPERFAMILY SSF52096 2 258 8.24E-83 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS19805 784b8c8359bf14f2a14cb23e1947804f 258 Gene3D G3DSA:3.90.226.10 3 199 6.3E-63 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS10110 6faa1409f0497a0cbce1aafdb8d88808 287 SMART SM00062 29 256 4.3E-8 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RR42_RS10110 6faa1409f0497a0cbce1aafdb8d88808 287 TIGRFAM TIGR04553 ABC_peri_selen: putative selenate ABC transporter periplasmic binding protein 29 287 2.2E-118 T 23-04-2016 IPR030836 Putative selenate ABC transporter periplasmic binding protein RR42_RS10110 6faa1409f0497a0cbce1aafdb8d88808 287 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 33 273 5.5E-71 T 23-04-2016 RR42_RS10110 6faa1409f0497a0cbce1aafdb8d88808 287 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 12 246 8.6E-71 T 23-04-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 RR42_RS10110 6faa1409f0497a0cbce1aafdb8d88808 287 PANTHER PTHR30024 4 242 3.2E-46 T 23-04-2016 RR42_RS10110 6faa1409f0497a0cbce1aafdb8d88808 287 PANTHER PTHR30024:SF17 4 242 3.2E-46 T 23-04-2016 RR42_RS10110 6faa1409f0497a0cbce1aafdb8d88808 287 Gene3D G3DSA:3.40.190.10 52 130 3.0E-7 T 23-04-2016 RR42_RS10110 6faa1409f0497a0cbce1aafdb8d88808 287 Gene3D G3DSA:3.40.190.10 131 237 6.5E-16 T 23-04-2016 RR42_RS10110 6faa1409f0497a0cbce1aafdb8d88808 287 SUPERFAMILY SSF53850 29 244 4.44E-38 T 23-04-2016 RR42_RS06465 9a2b16e5223367a6c3f47cb28d9dec42 436 PANTHER PTHR11808:SF12 4 236 4.0E-203 T 23-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 RR42_RS06465 9a2b16e5223367a6c3f47cb28d9dec42 436 PANTHER PTHR11808:SF12 266 427 4.0E-203 T 23-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 RR42_RS06465 9a2b16e5223367a6c3f47cb28d9dec42 436 Gene3D G3DSA:3.90.1150.10 289 425 1.6E-49 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS06465 9a2b16e5223367a6c3f47cb28d9dec42 436 PIRSF PIRSF001434 1 426 7.7E-128 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RR42_RS06465 9a2b16e5223367a6c3f47cb28d9dec42 436 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 423 3.1E-128 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RR42_RS06465 9a2b16e5223367a6c3f47cb28d9dec42 436 Gene3D G3DSA:3.40.640.10 5 287 1.9E-106 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS06465 9a2b16e5223367a6c3f47cb28d9dec42 436 SUPERFAMILY SSF53383 5 423 2.74E-118 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS06465 9a2b16e5223367a6c3f47cb28d9dec42 436 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 5 422 2.6E-168 T 23-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 RR42_RS06465 9a2b16e5223367a6c3f47cb28d9dec42 436 PANTHER PTHR11808 4 236 4.0E-203 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RR42_RS06465 9a2b16e5223367a6c3f47cb28d9dec42 436 PANTHER PTHR11808 266 427 4.0E-203 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RR42_RS04505 e7c3e2395cc33647ca35f497787e6506 412 Gene3D G3DSA:3.10.180.10 350 407 8.5E-4 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS04505 e7c3e2395cc33647ca35f497787e6506 412 PANTHER PTHR23083 10 279 1.3E-12 T 23-04-2016 RR42_RS04505 e7c3e2395cc33647ca35f497787e6506 412 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 6 410 32.886 T 23-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 RR42_RS04505 e7c3e2395cc33647ca35f497787e6506 412 SUPERFAMILY SSF48452 40 93 2.24E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS04505 e7c3e2395cc33647ca35f497787e6506 412 SUPERFAMILY SSF48452 155 236 2.24E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS04505 e7c3e2395cc33647ca35f497787e6506 412 Pfam PF13432 Tetratricopeptide repeat 185 234 1.3E-6 T 23-04-2016 RR42_RS04505 e7c3e2395cc33647ca35f497787e6506 412 Pfam PF13432 Tetratricopeptide repeat 43 90 6.6E-5 T 23-04-2016 RR42_RS04505 e7c3e2395cc33647ca35f497787e6506 412 SMART SM00028 180 213 6.1 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RR42_RS04505 e7c3e2395cc33647ca35f497787e6506 412 SMART SM00028 70 103 320.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RR42_RS04505 e7c3e2395cc33647ca35f497787e6506 412 SMART SM00028 36 69 30.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RR42_RS04505 e7c3e2395cc33647ca35f497787e6506 412 Gene3D G3DSA:1.25.40.10 42 279 9.8E-21 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS10650 7b2e5c1e4b3f0945a2591747d88fef9e 588 SUPERFAMILY SSF56801 35 576 7.72E-150 T 23-04-2016 RR42_RS10650 7b2e5c1e4b3f0945a2591747d88fef9e 588 Gene3D G3DSA:3.40.50.980 227 388 2.7E-29 T 23-04-2016 RR42_RS10650 7b2e5c1e4b3f0945a2591747d88fef9e 588 Pfam PF00501 AMP-binding enzyme 64 476 1.0E-83 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS10650 7b2e5c1e4b3f0945a2591747d88fef9e 588 Pfam PF13193 AMP-binding enzyme C-terminal domain 485 563 6.8E-24 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RR42_RS10650 7b2e5c1e4b3f0945a2591747d88fef9e 588 Gene3D G3DSA:2.30.38.10 389 470 3.2E-21 T 23-04-2016 RR42_RS10650 7b2e5c1e4b3f0945a2591747d88fef9e 588 Gene3D G3DSA:3.30.300.30 471 576 1.3E-27 T 23-04-2016 RR42_RS10650 7b2e5c1e4b3f0945a2591747d88fef9e 588 ProSitePatterns PS00455 Putative AMP-binding domain signature. 221 232 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS10650 7b2e5c1e4b3f0945a2591747d88fef9e 588 PANTHER PTHR24095 47 585 3.8E-186 T 23-04-2016 RR42_RS10650 7b2e5c1e4b3f0945a2591747d88fef9e 588 Gene3D G3DSA:3.40.50.980 74 226 1.2E-28 T 23-04-2016 RR42_RS15740 921d497394cee8cb8381ec859085c078 214 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 59 88 5.2E-4 T 23-04-2016 IPR001451 Hexapeptide repeat RR42_RS15740 921d497394cee8cb8381ec859085c078 214 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 124 157 1.9E-8 T 23-04-2016 IPR001451 Hexapeptide repeat RR42_RS15740 921d497394cee8cb8381ec859085c078 214 PANTHER PTHR23416 12 100 2.9E-26 T 23-04-2016 RR42_RS15740 921d497394cee8cb8381ec859085c078 214 PANTHER PTHR23416 116 184 2.9E-26 T 23-04-2016 RR42_RS15740 921d497394cee8cb8381ec859085c078 214 Gene3D G3DSA:2.160.10.10 46 181 4.8E-36 T 23-04-2016 RR42_RS15740 921d497394cee8cb8381ec859085c078 214 SUPERFAMILY SSF51161 55 178 1.39E-33 T 23-04-2016 IPR011004 Trimeric LpxA-like RR42_RS02025 4e9502ca3780673b23473fd4e5bf615c 292 PIRSF PIRSF010376 12 291 7.9E-87 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 RR42_RS02025 4e9502ca3780673b23473fd4e5bf615c 292 Gene3D G3DSA:3.30.230.10 16 167 1.6E-52 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RR42_RS02025 4e9502ca3780673b23473fd4e5bf615c 292 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 16 288 1.7E-78 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 RR42_RS02025 4e9502ca3780673b23473fd4e5bf615c 292 PANTHER PTHR20861:SF2 17 278 3.3E-83 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 RR42_RS02025 4e9502ca3780673b23473fd4e5bf615c 292 Gene3D G3DSA:3.30.70.890 169 290 2.0E-40 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain RR42_RS02025 4e9502ca3780673b23473fd4e5bf615c 292 SUPERFAMILY SSF55060 169 289 2.88E-31 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain RR42_RS02025 4e9502ca3780673b23473fd4e5bf615c 292 Pfam PF00288 GHMP kinases N terminal domain 95 152 2.1E-9 T 23-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 RR42_RS02025 4e9502ca3780673b23473fd4e5bf615c 292 Pfam PF08544 GHMP kinases C terminal 223 272 8.2E-8 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain RR42_RS02025 4e9502ca3780673b23473fd4e5bf615c 292 SUPERFAMILY SSF54211 16 165 3.64E-44 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RR42_RS02025 4e9502ca3780673b23473fd4e5bf615c 292 PANTHER PTHR20861 17 278 3.3E-83 T 23-04-2016 RR42_RS02025 4e9502ca3780673b23473fd4e5bf615c 292 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 13 285 32.189 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 RR42_RS19825 08c69fef9f92e4ff57490160682e6057 305 Pfam PF03466 LysR substrate binding domain 90 293 4.2E-39 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS19825 08c69fef9f92e4ff57490160682e6057 305 PANTHER PTHR30537:SF5 1 294 4.1E-106 T 23-04-2016 RR42_RS19825 08c69fef9f92e4ff57490160682e6057 305 SUPERFAMILY SSF46785 4 85 2.78E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19825 08c69fef9f92e4ff57490160682e6057 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 9.4E-16 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS19825 08c69fef9f92e4ff57490160682e6057 305 Gene3D G3DSA:3.40.190.10 177 261 7.3E-20 T 23-04-2016 RR42_RS19825 08c69fef9f92e4ff57490160682e6057 305 Gene3D G3DSA:1.10.10.10 3 84 7.6E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19825 08c69fef9f92e4ff57490160682e6057 305 Gene3D G3DSA:3.40.190.10 92 176 3.8E-22 T 23-04-2016 RR42_RS19825 08c69fef9f92e4ff57490160682e6057 305 PANTHER PTHR30537 1 294 4.1E-106 T 23-04-2016 RR42_RS19825 08c69fef9f92e4ff57490160682e6057 305 SUPERFAMILY SSF53850 91 294 3.62E-43 T 23-04-2016 RR42_RS03060 b7bff2348521ec1e8ac19dafae13b6e1 566 PANTHER PTHR23508:SF7 465 562 1.6E-231 T 23-04-2016 RR42_RS03060 b7bff2348521ec1e8ac19dafae13b6e1 566 PANTHER PTHR23508:SF7 15 344 1.6E-231 T 23-04-2016 RR42_RS03060 b7bff2348521ec1e8ac19dafae13b6e1 566 Pfam PF00083 Sugar (and other) transporter 28 240 3.2E-27 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RR42_RS03060 b7bff2348521ec1e8ac19dafae13b6e1 566 PANTHER PTHR23508 465 562 1.6E-231 T 23-04-2016 RR42_RS03060 b7bff2348521ec1e8ac19dafae13b6e1 566 PANTHER PTHR23508 15 344 1.6E-231 T 23-04-2016 RR42_RS03060 b7bff2348521ec1e8ac19dafae13b6e1 566 ProSitePatterns PS00217 Sugar transport proteins signature 2. 136 161 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RR42_RS03060 b7bff2348521ec1e8ac19dafae13b6e1 566 Gene3D G3DSA:1.20.1250.20 463 558 1.0E-24 T 23-04-2016 RR42_RS03060 b7bff2348521ec1e8ac19dafae13b6e1 566 Gene3D G3DSA:1.20.1250.20 24 230 8.1E-23 T 23-04-2016 RR42_RS03060 b7bff2348521ec1e8ac19dafae13b6e1 566 Gene3D G3DSA:1.20.1250.20 254 342 1.0E-24 T 23-04-2016 RR42_RS03060 b7bff2348521ec1e8ac19dafae13b6e1 566 SUPERFAMILY SSF103473 19 343 8.11E-59 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS03060 b7bff2348521ec1e8ac19dafae13b6e1 566 SUPERFAMILY SSF103473 467 560 8.11E-59 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS19170 7057e10ad375ccf6df02922280b074b8 172 ProSitePatterns PS00585 Ribosomal protein S5 signature. 34 66 - T 23-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site RR42_RS19170 7057e10ad375ccf6df02922280b074b8 172 Gene3D G3DSA:3.30.160.20 15 79 1.3E-25 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain RR42_RS19170 7057e10ad375ccf6df02922280b074b8 172 SUPERFAMILY SSF54768 12 82 3.56E-21 T 23-04-2016 RR42_RS19170 7057e10ad375ccf6df02922280b074b8 172 Pfam PF03719 Ribosomal protein S5, C-terminal domain 93 163 8.0E-31 T 23-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 RR42_RS19170 7057e10ad375ccf6df02922280b074b8 172 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 169 34.403 T 23-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 RR42_RS19170 7057e10ad375ccf6df02922280b074b8 172 Pfam PF00333 Ribosomal protein S5, N-terminal domain 17 80 1.3E-24 T 23-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 RR42_RS19170 7057e10ad375ccf6df02922280b074b8 172 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 16 169 1.2E-64 T 23-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 RR42_RS19170 7057e10ad375ccf6df02922280b074b8 172 Gene3D G3DSA:3.30.230.10 82 165 9.6E-34 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RR42_RS19170 7057e10ad375ccf6df02922280b074b8 172 PANTHER PTHR13718 15 170 8.0E-68 T 23-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 RR42_RS19170 7057e10ad375ccf6df02922280b074b8 172 SUPERFAMILY SSF54211 85 165 3.79E-27 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RR42_RS18340 a955cdc740e0fca05893d9d649ae6708 836 PANTHER PTHR30509:SF8 2 620 1.5E-28 T 23-04-2016 RR42_RS18340 a955cdc740e0fca05893d9d649ae6708 836 PANTHER PTHR30509:SF8 831 836 1.5E-28 T 23-04-2016 RR42_RS18340 a955cdc740e0fca05893d9d649ae6708 836 Pfam PF12805 FUSC-like inner membrane protein yccS 68 334 4.5E-60 T 23-04-2016 IPR032692 Integral membrane protein YccS, N-terminal RR42_RS18340 a955cdc740e0fca05893d9d649ae6708 836 PANTHER PTHR30509 2 620 1.5E-28 T 23-04-2016 RR42_RS18340 a955cdc740e0fca05893d9d649ae6708 836 PANTHER PTHR30509 831 836 1.5E-28 T 23-04-2016 RR42_RS18340 a955cdc740e0fca05893d9d649ae6708 836 Pfam PF13515 Fusaric acid resistance protein-like 402 523 1.1E-17 T 23-04-2016 RR42_RS01665 3faf50f65eeacb4aa39f19b5aab608ea 325 PANTHER PTHR32332 6 321 4.2E-148 T 23-04-2016 RR42_RS01665 3faf50f65eeacb4aa39f19b5aab608ea 325 Pfam PF03060 Nitronate monooxygenase 88 310 3.4E-25 T 23-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 RR42_RS01665 3faf50f65eeacb4aa39f19b5aab608ea 325 Gene3D G3DSA:3.20.20.70 13 307 1.2E-48 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS01665 3faf50f65eeacb4aa39f19b5aab608ea 325 PANTHER PTHR32332:SF21 6 321 4.2E-148 T 23-04-2016 RR42_RS01665 3faf50f65eeacb4aa39f19b5aab608ea 325 SUPERFAMILY SSF51412 12 307 1.25E-56 T 23-04-2016 RR42_RS07960 fd484bf34e1e294f19d51f205d18e242 245 Gene3D G3DSA:3.30.450.40 72 243 8.9E-48 T 23-04-2016 IPR029016 GAF domain-like RR42_RS07960 fd484bf34e1e294f19d51f205d18e242 245 Pfam PF01614 Bacterial transcriptional regulator 120 241 1.6E-26 T 23-04-2016 IPR014757 Transcription regulator IclR, C-terminal RR42_RS07960 fd484bf34e1e294f19d51f205d18e242 245 Gene3D G3DSA:1.10.10.10 1 69 1.8E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS07960 fd484bf34e1e294f19d51f205d18e242 245 SUPERFAMILY SSF55781 64 243 5.76E-45 T 23-04-2016 IPR029016 GAF domain-like RR42_RS07960 fd484bf34e1e294f19d51f205d18e242 245 SMART SM00346 1 88 1.7E-26 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RR42_RS07960 fd484bf34e1e294f19d51f205d18e242 245 SUPERFAMILY SSF46785 1 71 1.37E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS07960 fd484bf34e1e294f19d51f205d18e242 245 Pfam PF09339 IclR helix-turn-helix domain 1 50 4.7E-13 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RR42_RS07960 fd484bf34e1e294f19d51f205d18e242 245 PANTHER PTHR30136 1 245 3.4E-61 T 23-04-2016 RR42_RS16950 8433633ddd1be687dacfd72f3dbeadfe 354 Gene3D G3DSA:3.40.50.80 207 341 9.7E-40 T 23-04-2016 RR42_RS16950 8433633ddd1be687dacfd72f3dbeadfe 354 Gene3D G3DSA:3.10.20.30 2 92 9.5E-28 T 23-04-2016 IPR012675 Beta-grasp domain RR42_RS16950 8433633ddd1be687dacfd72f3dbeadfe 354 SUPERFAMILY SSF54292 2 89 3.93E-26 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS16950 8433633ddd1be687dacfd72f3dbeadfe 354 PANTHER PTHR19370:SF68 33 339 2.9E-62 T 23-04-2016 RR42_RS16950 8433633ddd1be687dacfd72f3dbeadfe 354 Pfam PF00970 Oxidoreductase FAD-binding domain 105 203 6.6E-15 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain RR42_RS16950 8433633ddd1be687dacfd72f3dbeadfe 354 Gene3D G3DSA:2.40.30.10 101 205 1.3E-29 T 23-04-2016 RR42_RS16950 8433633ddd1be687dacfd72f3dbeadfe 354 PANTHER PTHR19370 33 339 2.9E-62 T 23-04-2016 RR42_RS16950 8433633ddd1be687dacfd72f3dbeadfe 354 Pfam PF00175 Oxidoreductase NAD-binding domain 215 321 2.9E-22 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RR42_RS16950 8433633ddd1be687dacfd72f3dbeadfe 354 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RR42_RS16950 8433633ddd1be687dacfd72f3dbeadfe 354 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 306 314 3.1E-6 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS16950 8433633ddd1be687dacfd72f3dbeadfe 354 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 148 155 3.1E-6 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS16950 8433633ddd1be687dacfd72f3dbeadfe 354 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 214 233 3.1E-6 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS16950 8433633ddd1be687dacfd72f3dbeadfe 354 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 239 248 3.1E-6 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS16950 8433633ddd1be687dacfd72f3dbeadfe 354 SUPERFAMILY SSF63380 102 205 7.7E-21 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RR42_RS16950 8433633ddd1be687dacfd72f3dbeadfe 354 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 82 8.4E-15 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS16950 8433633ddd1be687dacfd72f3dbeadfe 354 SUPERFAMILY SSF52343 206 340 3.27E-40 T 23-04-2016 RR42_RS16950 8433633ddd1be687dacfd72f3dbeadfe 354 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 144 7.3E-18 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RR42_RS16950 8433633ddd1be687dacfd72f3dbeadfe 354 PRINTS PR00410 Phenol hydroxylase reductase family signature 214 233 7.3E-18 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RR42_RS16950 8433633ddd1be687dacfd72f3dbeadfe 354 PRINTS PR00410 Phenol hydroxylase reductase family signature 239 248 7.3E-18 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RR42_RS16950 8433633ddd1be687dacfd72f3dbeadfe 354 PRINTS PR00410 Phenol hydroxylase reductase family signature 306 314 7.3E-18 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RR42_RS16950 8433633ddd1be687dacfd72f3dbeadfe 354 PRINTS PR00410 Phenol hydroxylase reductase family signature 198 207 7.3E-18 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RR42_RS11305 8f271a41b57562b0b707c3d624874b45 432 Pfam PF07690 Major Facilitator Superfamily 16 293 2.5E-46 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS11305 8f271a41b57562b0b707c3d624874b45 432 Pfam PF07690 Major Facilitator Superfamily 301 420 9.3E-10 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS11305 8f271a41b57562b0b707c3d624874b45 432 Gene3D G3DSA:1.20.1250.20 220 415 5.0E-27 T 23-04-2016 RR42_RS11305 8f271a41b57562b0b707c3d624874b45 432 PANTHER PTHR11662:SF285 1 420 3.2E-203 T 23-04-2016 RR42_RS11305 8f271a41b57562b0b707c3d624874b45 432 SUPERFAMILY SSF103473 4 416 1.83E-81 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS11305 8f271a41b57562b0b707c3d624874b45 432 PANTHER PTHR11662 1 420 3.2E-203 T 23-04-2016 RR42_RS11305 8f271a41b57562b0b707c3d624874b45 432 Gene3D G3DSA:1.20.1250.20 7 199 1.0E-43 T 23-04-2016 RR42_RS11305 8f271a41b57562b0b707c3d624874b45 432 PIRSF PIRSF002808 1 426 7.5E-34 T 23-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 RR42_RS16115 c8a8d3316e9f0698308792c91b311890 254 PANTHER PTHR34148:SF1 1 253 4.9E-51 T 23-04-2016 RR42_RS16115 c8a8d3316e9f0698308792c91b311890 254 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 254 53.7 T 23-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 RR42_RS16115 c8a8d3316e9f0698308792c91b311890 254 PANTHER PTHR34148 1 253 4.9E-51 T 23-04-2016 RR42_RS16115 c8a8d3316e9f0698308792c91b311890 254 Pfam PF02654 Cobalamin-5-phosphate synthase 11 246 9.2E-51 T 23-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 RR42_RS15430 baace88f511a948005e4f5d53a535d3c 631 Gene3D G3DSA:3.40.50.1820 313 627 2.4E-91 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS15430 baace88f511a948005e4f5d53a535d3c 631 PANTHER PTHR11731 124 627 2.3E-117 T 23-04-2016 RR42_RS15430 baace88f511a948005e4f5d53a535d3c 631 SUPERFAMILY SSF82171 32 366 1.55E-19 T 23-04-2016 RR42_RS15430 baace88f511a948005e4f5d53a535d3c 631 SUPERFAMILY SSF53474 366 627 5.87E-70 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS15430 baace88f511a948005e4f5d53a535d3c 631 Pfam PF00326 Prolyl oligopeptidase family 414 628 1.1E-44 T 23-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 RR42_RS15430 baace88f511a948005e4f5d53a535d3c 631 PANTHER PTHR11731:SF140 124 627 2.3E-117 T 23-04-2016 RR42_RS15430 baace88f511a948005e4f5d53a535d3c 631 Gene3D G3DSA:2.120.10.30 31 270 8.8E-20 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like RR42_RS02725 5618c16dedf1055b3d0c983f3d672bb8 77 PANTHER PTHR32071 10 76 1.3E-15 T 23-04-2016 RR42_RS02725 5618c16dedf1055b3d0c983f3d672bb8 77 Gene3D G3DSA:1.10.10.60 6 76 6.0E-24 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS02725 5618c16dedf1055b3d0c983f3d672bb8 77 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 40 57 5.0E-9 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS02725 5618c16dedf1055b3d0c983f3d672bb8 77 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 57 77 5.0E-9 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS02725 5618c16dedf1055b3d0c983f3d672bb8 77 PIRSF PIRSF002097 1 77 6.1E-32 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 RR42_RS02725 5618c16dedf1055b3d0c983f3d672bb8 77 Pfam PF02954 Bacterial regulatory protein, Fis family 34 74 4.7E-14 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS02725 5618c16dedf1055b3d0c983f3d672bb8 77 SUPERFAMILY SSF46689 8 76 3.44E-20 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS26580 a5e366ab0b701676aaefa2b38af34ebf 59 SUPERFAMILY SSF53383 1 59 1.29E-14 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS26580 a5e366ab0b701676aaefa2b38af34ebf 59 Gene3D G3DSA:3.40.640.10 1 59 2.2E-19 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS26580 a5e366ab0b701676aaefa2b38af34ebf 59 PANTHER PTHR11879 1 59 2.0E-24 T 23-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RR42_RS26580 a5e366ab0b701676aaefa2b38af34ebf 59 Pfam PF00155 Aminotransferase class I and II 1 59 3.4E-10 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RR42_RS02030 fd5d10d31f28c635b68dda48a533b330 206 SUPERFAMILY SSF89392 20 201 2.24E-38 T 23-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX RR42_RS02030 fd5d10d31f28c635b68dda48a533b330 206 Pfam PF03550 Outer membrane lipoprotein LolB 40 201 3.0E-39 T 23-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 RR42_RS02030 fd5d10d31f28c635b68dda48a533b330 206 Gene3D G3DSA:2.50.20.10 15 201 3.7E-42 T 23-04-2016 RR42_RS02030 fd5d10d31f28c635b68dda48a533b330 206 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 55 168 2.3E-18 T 23-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 RR42_RS02030 fd5d10d31f28c635b68dda48a533b330 206 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 4 205 20.842 T 23-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 RR42_RS20530 992fbadc5e094369835a190ba6437a96 618 PIRSF PIRSF001348 1 618 7.2E-288 T 23-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 RR42_RS20530 992fbadc5e094369835a190ba6437a96 618 Gene3D G3DSA:3.90.228.20 249 320 8.6E-32 T 23-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 RR42_RS20530 992fbadc5e094369835a190ba6437a96 618 Gene3D G3DSA:3.90.228.20 339 616 7.3E-96 T 23-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 RR42_RS20530 992fbadc5e094369835a190ba6437a96 618 PANTHER PTHR11561 21 618 0.0 T 23-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 RR42_RS20530 992fbadc5e094369835a190ba6437a96 618 Gene3D G3DSA:3.40.449.10 12 248 1.1E-102 T 23-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 RR42_RS20530 992fbadc5e094369835a190ba6437a96 618 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 273 281 - T 23-04-2016 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 RR42_RS20530 992fbadc5e094369835a190ba6437a96 618 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 14 617 51.379 T 23-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 RR42_RS20530 992fbadc5e094369835a190ba6437a96 618 SUPERFAMILY SSF53795 249 616 1.42E-154 T 23-04-2016 RR42_RS20530 992fbadc5e094369835a190ba6437a96 618 SUPERFAMILY SSF68923 9 248 4.66E-103 T 23-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 RR42_RS20530 992fbadc5e094369835a190ba6437a96 618 Pfam PF00821 Phosphoenolpyruvate carboxykinase 26 616 6.5E-284 T 23-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 RR42_RS03525 40c978c61a9bf2c17eeb0347e0caa1f5 161 Gene3D G3DSA:2.30.110.20 1 160 7.5E-65 T 23-04-2016 IPR008514 Type VI secretion system effector, Hcp RR42_RS03525 40c978c61a9bf2c17eeb0347e0caa1f5 161 Pfam PF05638 Type VI secretion system effector, Hcp 6 136 4.5E-42 T 23-04-2016 IPR008514 Type VI secretion system effector, Hcp RR42_RS03525 40c978c61a9bf2c17eeb0347e0caa1f5 161 PANTHER PTHR36152 1 161 9.3E-83 T 23-04-2016 RR42_RS03525 40c978c61a9bf2c17eeb0347e0caa1f5 161 PANTHER PTHR36152:SF1 1 161 9.3E-83 T 23-04-2016 RR42_RS03525 40c978c61a9bf2c17eeb0347e0caa1f5 161 SUPERFAMILY SSF141452 2 160 1.83E-54 T 23-04-2016 IPR008514 Type VI secretion system effector, Hcp RR42_RS03525 40c978c61a9bf2c17eeb0347e0caa1f5 161 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 143 1.0E-20 T 23-04-2016 IPR008514 Type VI secretion system effector, Hcp RR42_RS09570 2a0e09a669094ce67f6a1da8c3aa02d9 527 Gene3D G3DSA:3.90.1200.10 131 288 1.5E-7 T 23-04-2016 RR42_RS09570 2a0e09a669094ce67f6a1da8c3aa02d9 527 PANTHER PTHR12083 9 376 2.6E-111 T 23-04-2016 RR42_RS09570 2a0e09a669094ce67f6a1da8c3aa02d9 527 PANTHER PTHR12083 421 524 2.6E-111 T 23-04-2016 RR42_RS09570 2a0e09a669094ce67f6a1da8c3aa02d9 527 SUPERFAMILY SSF52540 331 376 1.41E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS09570 2a0e09a669094ce67f6a1da8c3aa02d9 527 SUPERFAMILY SSF52540 421 516 1.41E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS09570 2a0e09a669094ce67f6a1da8c3aa02d9 527 Pfam PF13671 AAA domain 344 509 6.6E-32 T 23-04-2016 RR42_RS09570 2a0e09a669094ce67f6a1da8c3aa02d9 527 PANTHER PTHR12083:SF8 9 376 2.6E-111 T 23-04-2016 RR42_RS09570 2a0e09a669094ce67f6a1da8c3aa02d9 527 PANTHER PTHR12083:SF8 421 524 2.6E-111 T 23-04-2016 RR42_RS09570 2a0e09a669094ce67f6a1da8c3aa02d9 527 Gene3D G3DSA:3.40.50.300 315 352 5.3E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS09570 2a0e09a669094ce67f6a1da8c3aa02d9 527 SUPERFAMILY SSF56112 4 304 3.4E-24 T 23-04-2016 IPR011009 Protein kinase-like domain RR42_RS09570 2a0e09a669094ce67f6a1da8c3aa02d9 527 Pfam PF01636 Phosphotransferase enzyme family 60 226 2.9E-6 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase RR42_RS09570 2a0e09a669094ce67f6a1da8c3aa02d9 527 Gene3D G3DSA:3.40.50.300 353 499 6.6E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01520 5179b35dce0665d1becc741104d1b83e 306 Pfam PF03466 LysR substrate binding domain 89 294 7.9E-46 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS01520 5179b35dce0665d1becc741104d1b83e 306 PANTHER PTHR30537 1 294 9.9E-111 T 23-04-2016 RR42_RS01520 5179b35dce0665d1becc741104d1b83e 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.3E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS01520 5179b35dce0665d1becc741104d1b83e 306 PANTHER PTHR30537:SF5 1 294 9.9E-111 T 23-04-2016 RR42_RS01520 5179b35dce0665d1becc741104d1b83e 306 SUPERFAMILY SSF46785 3 111 4.82E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS01520 5179b35dce0665d1becc741104d1b83e 306 Gene3D G3DSA:1.10.10.10 3 84 5.0E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS01520 5179b35dce0665d1becc741104d1b83e 306 Gene3D G3DSA:3.40.190.10 92 176 2.4E-23 T 23-04-2016 RR42_RS01520 5179b35dce0665d1becc741104d1b83e 306 Gene3D G3DSA:3.40.190.10 177 261 1.9E-23 T 23-04-2016 RR42_RS01520 5179b35dce0665d1becc741104d1b83e 306 SUPERFAMILY SSF53850 90 296 5.16E-47 T 23-04-2016 RR42_RS13120 d264a040cf8db4a63afb5227a8318cd5 447 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 356 436 6.7E-26 T 23-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like RR42_RS13120 d264a040cf8db4a63afb5227a8318cd5 447 Gene3D G3DSA:3.30.300.20 362 438 5.9E-25 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta RR42_RS13120 d264a040cf8db4a63afb5227a8318cd5 447 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 436 4.8E-169 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RR42_RS13120 d264a040cf8db4a63afb5227a8318cd5 447 PANTHER PTHR11649:SF5 1 439 3.8E-141 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RR42_RS13120 d264a040cf8db4a63afb5227a8318cd5 447 Gene3D G3DSA:3.40.50.300 178 361 2.1E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13120 d264a040cf8db4a63afb5227a8318cd5 447 Gene3D G3DSA:3.40.50.300 3 171 3.7E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13120 d264a040cf8db4a63afb5227a8318cd5 447 SMART SM00382 179 322 0.2 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS13120 d264a040cf8db4a63afb5227a8318cd5 447 SMART SM00382 1 166 8.2 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS13120 d264a040cf8db4a63afb5227a8318cd5 447 Hamap MF_00195 GTPase Der [der]. 2 439 37.579 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RR42_RS13120 d264a040cf8db4a63afb5227a8318cd5 447 PIRSF PIRSF006485 1 444 2.2E-168 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RR42_RS13120 d264a040cf8db4a63afb5227a8318cd5 447 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.5E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RR42_RS13120 d264a040cf8db4a63afb5227a8318cd5 447 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 1.5E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RR42_RS13120 d264a040cf8db4a63afb5227a8318cd5 447 SUPERFAMILY SSF52540 138 443 6.95E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13120 d264a040cf8db4a63afb5227a8318cd5 447 PANTHER PTHR11649 1 439 3.8E-141 T 23-04-2016 RR42_RS13120 d264a040cf8db4a63afb5227a8318cd5 447 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 157 3.5E-17 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RR42_RS13120 d264a040cf8db4a63afb5227a8318cd5 447 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 180 342 8.7E-26 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RR42_RS13120 d264a040cf8db4a63afb5227a8318cd5 447 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.1E-24 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RR42_RS13120 d264a040cf8db4a63afb5227a8318cd5 447 Pfam PF01926 50S ribosome-binding GTPase 182 300 1.9E-24 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RR42_RS13120 d264a040cf8db4a63afb5227a8318cd5 447 SUPERFAMILY SSF52540 4 165 1.33E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS16365 d6b2d92f206265033123c8ffbb1bb774 261 PANTHER PTHR24319:SF23 1 261 2.6E-57 T 23-04-2016 RR42_RS16365 d6b2d92f206265033123c8ffbb1bb774 261 Gene3D G3DSA:3.40.50.720 2 257 8.5E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS16365 d6b2d92f206265033123c8ffbb1bb774 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 257 4.0E-46 T 23-04-2016 RR42_RS16365 d6b2d92f206265033123c8ffbb1bb774 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 5.4E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16365 d6b2d92f206265033123c8ffbb1bb774 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.4E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16365 d6b2d92f206265033123c8ffbb1bb774 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 5.4E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16365 d6b2d92f206265033123c8ffbb1bb774 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 5.4E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16365 d6b2d92f206265033123c8ffbb1bb774 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 5.4E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16365 d6b2d92f206265033123c8ffbb1bb774 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 5.4E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16365 d6b2d92f206265033123c8ffbb1bb774 261 SUPERFAMILY SSF51735 7 258 2.8E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS16365 d6b2d92f206265033123c8ffbb1bb774 261 PANTHER PTHR24319 1 261 2.6E-57 T 23-04-2016 RR42_RS02880 792f7c447b5b690092e24b73ffdd41f5 145 Gene3D G3DSA:3.40.50.620 2 144 7.9E-31 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS02880 792f7c447b5b690092e24b73ffdd41f5 145 Pfam PF00582 Universal stress protein family 2 140 8.4E-25 T 23-04-2016 IPR006016 UspA GO:0006950 RR42_RS02880 792f7c447b5b690092e24b73ffdd41f5 145 PRINTS PR01438 Universal stress protein signature 118 140 6.7E-14 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS02880 792f7c447b5b690092e24b73ffdd41f5 145 PRINTS PR01438 Universal stress protein signature 1 18 6.7E-14 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS02880 792f7c447b5b690092e24b73ffdd41f5 145 PRINTS PR01438 Universal stress protein signature 100 112 6.7E-14 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS02880 792f7c447b5b690092e24b73ffdd41f5 145 SUPERFAMILY SSF52402 1 142 2.26E-31 T 23-04-2016 RR42_RS02880 792f7c447b5b690092e24b73ffdd41f5 145 PANTHER PTHR31964 3 145 4.1E-24 T 23-04-2016 RR42_RS00385 96bcaa087cd49674de44ada8f0825460 280 Gene3D G3DSA:3.90.850.10 67 278 6.2E-88 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RR42_RS00385 96bcaa087cd49674de44ada8f0825460 280 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 71 277 1.9E-72 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RR42_RS00385 96bcaa087cd49674de44ada8f0825460 280 PANTHER PTHR11820 1 279 6.0E-160 T 23-04-2016 RR42_RS00385 96bcaa087cd49674de44ada8f0825460 280 SUPERFAMILY SSF56529 60 278 1.57E-84 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RR42_RS00385 96bcaa087cd49674de44ada8f0825460 280 PANTHER PTHR11820:SF71 1 279 6.0E-160 T 23-04-2016 RR42_RS13460 55fab17aede77551caa5180caa8b9ad9 300 PANTHER PTHR30425:SF0 18 300 2.2E-116 T 23-04-2016 RR42_RS13460 55fab17aede77551caa5180caa8b9ad9 300 Gene3D G3DSA:1.10.3720.10 86 300 7.6E-35 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS13460 55fab17aede77551caa5180caa8b9ad9 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 299 2.6E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS13460 55fab17aede77551caa5180caa8b9ad9 300 SUPERFAMILY SSF161098 50 294 9.94E-31 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS13460 55fab17aede77551caa5180caa8b9ad9 300 PANTHER PTHR30425 18 300 2.2E-116 T 23-04-2016 RR42_RS13460 55fab17aede77551caa5180caa8b9ad9 300 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 38 299 2.7E-80 T 23-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 RR42_RS07690 8281580d544ede94cfe9eea5fcfd9919 302 PANTHER PTHR30126 5 299 6.6E-40 T 23-04-2016 RR42_RS07690 8281580d544ede94cfe9eea5fcfd9919 302 SUPERFAMILY SSF46785 5 114 2.66E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS07690 8281580d544ede94cfe9eea5fcfd9919 302 Gene3D G3DSA:1.10.10.10 12 91 6.4E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS07690 8281580d544ede94cfe9eea5fcfd9919 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 65 3.7E-14 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS07690 8281580d544ede94cfe9eea5fcfd9919 302 SUPERFAMILY SSF53850 93 301 7.33E-29 T 23-04-2016 RR42_RS07690 8281580d544ede94cfe9eea5fcfd9919 302 Gene3D G3DSA:3.40.190.10 181 268 5.9E-12 T 23-04-2016 RR42_RS07690 8281580d544ede94cfe9eea5fcfd9919 302 Pfam PF03466 LysR substrate binding domain 92 298 5.8E-29 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS07690 8281580d544ede94cfe9eea5fcfd9919 302 Gene3D G3DSA:3.40.190.10 93 180 7.5E-12 T 23-04-2016 RR42_RS12125 426bc1aa5cbe551a37ad214c4f5d2d9b 216 Pfam PF00072 Response regulator receiver domain 6 121 2.6E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS12125 426bc1aa5cbe551a37ad214c4f5d2d9b 216 PANTHER PTHR26402:SF510 4 210 3.1E-44 T 23-04-2016 RR42_RS12125 426bc1aa5cbe551a37ad214c4f5d2d9b 216 Gene3D G3DSA:3.40.50.2300 1 157 1.1E-23 T 23-04-2016 RR42_RS12125 426bc1aa5cbe551a37ad214c4f5d2d9b 216 SUPERFAMILY SSF52172 3 137 6.83E-22 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS12125 426bc1aa5cbe551a37ad214c4f5d2d9b 216 SUPERFAMILY SSF46894 147 214 5.78E-17 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS12125 426bc1aa5cbe551a37ad214c4f5d2d9b 216 Gene3D G3DSA:1.10.10.10 158 215 2.8E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS12125 426bc1aa5cbe551a37ad214c4f5d2d9b 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 207 8.9E-15 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS12125 426bc1aa5cbe551a37ad214c4f5d2d9b 216 SMART SM00421 152 209 7.8E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS12125 426bc1aa5cbe551a37ad214c4f5d2d9b 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS12125 426bc1aa5cbe551a37ad214c4f5d2d9b 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 9.5E-7 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS12125 426bc1aa5cbe551a37ad214c4f5d2d9b 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 9.5E-7 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS12125 426bc1aa5cbe551a37ad214c4f5d2d9b 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 9.5E-7 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS12125 426bc1aa5cbe551a37ad214c4f5d2d9b 216 PANTHER PTHR26402 4 210 3.1E-44 T 23-04-2016 RR42_RS12125 426bc1aa5cbe551a37ad214c4f5d2d9b 216 SMART SM00448 4 121 1.6E-14 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 604 5.6E-289 T 23-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 650 36.676 T 23-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 PANTHER PTHR19375 2 654 0.0 T 23-04-2016 RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 Gene3D G3DSA:3.90.640.10 231 314 1.7E-30 T 23-04-2016 RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 Gene3D G3DSA:1.20.1270.10 533 604 2.0E-28 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 Gene3D G3DSA:3.30.420.40 197 230 1.0E-32 T 23-04-2016 RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 Gene3D G3DSA:3.30.420.40 320 361 1.0E-32 T 23-04-2016 RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 PANTHER PTHR19375:SF173 2 654 0.0 T 23-04-2016 RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 SUPERFAMILY SSF53067 188 383 8.3E-67 T 23-04-2016 RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 338 352 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 SUPERFAMILY SSF100920 385 541 1.01E-59 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 Gene3D G3DSA:2.60.34.10 391 532 3.8E-70 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 193 206 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 Gene3D G3DSA:3.30.30.30 53 106 4.9E-25 T 23-04-2016 RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 Gene3D G3DSA:3.30.420.40 4 52 5.1E-62 T 23-04-2016 RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 Gene3D G3DSA:3.30.420.40 119 196 5.1E-62 T 23-04-2016 RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 PRINTS PR00301 70kDa heat shock protein signature 335 351 4.7E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 PRINTS PR00301 70kDa heat shock protein signature 366 386 4.7E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 PRINTS PR00301 70kDa heat shock protein signature 3 16 4.7E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 PRINTS PR00301 70kDa heat shock protein signature 138 158 4.7E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 PRINTS PR00301 70kDa heat shock protein signature 470 486 4.7E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 PRINTS PR00301 70kDa heat shock protein signature 199 209 4.7E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 PRINTS PR00301 70kDa heat shock protein signature 31 43 4.7E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 PRINTS PR00301 70kDa heat shock protein signature 389 408 4.7E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 PRINTS PR00301 70kDa heat shock protein signature 54 62 4.7E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 Pfam PF00012 Hsp70 protein 4 604 1.4E-261 T 23-04-2016 IPR013126 Heat shock protein 70 family RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 SUPERFAMILY SSF53067 4 184 3.11E-64 T 23-04-2016 RR42_RS17275 8c8d0ed1806de9772af6aaa7181381fb 654 SUPERFAMILY SSF100934 508 605 7.32E-23 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RR42_RS15885 d185d5cd6b38dc5863e38718aba43bda 516 Pfam PF00875 DNA photolyase 22 186 2.9E-49 T 23-04-2016 IPR006050 DNA photolyase, N-terminal RR42_RS15885 d185d5cd6b38dc5863e38718aba43bda 516 Gene3D G3DSA:1.10.579.10 306 503 7.7E-76 T 23-04-2016 RR42_RS15885 d185d5cd6b38dc5863e38718aba43bda 516 Gene3D G3DSA:1.25.40.80 168 189 3.9E-28 T 23-04-2016 RR42_RS15885 d185d5cd6b38dc5863e38718aba43bda 516 Gene3D G3DSA:1.25.40.80 225 305 3.9E-28 T 23-04-2016 RR42_RS15885 d185d5cd6b38dc5863e38718aba43bda 516 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 370 389 - T 23-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal RR42_RS15885 d185d5cd6b38dc5863e38718aba43bda 516 SUPERFAMILY SSF48173 216 504 4.71E-103 T 23-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain RR42_RS15885 d185d5cd6b38dc5863e38718aba43bda 516 SUPERFAMILY SSF52425 21 202 3.27E-55 T 23-04-2016 IPR006050 DNA photolyase, N-terminal RR42_RS15885 d185d5cd6b38dc5863e38718aba43bda 516 Gene3D G3DSA:3.40.50.620 21 167 1.3E-49 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS15885 d185d5cd6b38dc5863e38718aba43bda 516 PANTHER PTHR11455 22 506 5.4E-190 T 23-04-2016 RR42_RS15885 d185d5cd6b38dc5863e38718aba43bda 516 Pfam PF03441 FAD binding domain of DNA photolyase 297 499 4.6E-80 T 23-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain RR42_RS15885 d185d5cd6b38dc5863e38718aba43bda 516 PRINTS PR00147 DNA photolyase signature 409 423 6.1E-28 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 RR42_RS15885 d185d5cd6b38dc5863e38718aba43bda 516 PRINTS PR00147 DNA photolyase signature 350 366 6.1E-28 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 RR42_RS15885 d185d5cd6b38dc5863e38718aba43bda 516 PRINTS PR00147 DNA photolyase signature 370 388 6.1E-28 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 RR42_RS15885 d185d5cd6b38dc5863e38718aba43bda 516 PRINTS PR00147 DNA photolyase signature 161 177 6.1E-28 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 RR42_RS15885 d185d5cd6b38dc5863e38718aba43bda 516 PANTHER PTHR11455:SF18 22 506 5.4E-190 T 23-04-2016 RR42_RS15755 9ffd0e0df734792a5e71a30e8e40b8b5 208 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 82 115 1.2E-5 T 23-04-2016 IPR001451 Hexapeptide repeat RR42_RS15755 9ffd0e0df734792a5e71a30e8e40b8b5 208 SUPERFAMILY SSF51161 42 200 2.48E-35 T 23-04-2016 IPR011004 Trimeric LpxA-like RR42_RS15755 9ffd0e0df734792a5e71a30e8e40b8b5 208 Gene3D G3DSA:2.160.10.10 28 206 6.9E-39 T 23-04-2016 RR42_RS15755 9ffd0e0df734792a5e71a30e8e40b8b5 208 PANTHER PTHR23416 84 125 2.2E-31 T 23-04-2016 RR42_RS15755 9ffd0e0df734792a5e71a30e8e40b8b5 208 PANTHER PTHR23416 143 202 2.2E-31 T 23-04-2016 RR42_RS15755 9ffd0e0df734792a5e71a30e8e40b8b5 208 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 152 187 9.8E-12 T 23-04-2016 IPR001451 Hexapeptide repeat RR42_RS20270 f2f2dbe02be27033efaad33ea96a2b79 294 PANTHER PTHR11795:SF379 1 293 1.6E-112 T 23-04-2016 RR42_RS20270 f2f2dbe02be27033efaad33ea96a2b79 294 PANTHER PTHR11795 1 293 1.6E-112 T 23-04-2016 RR42_RS20270 f2f2dbe02be27033efaad33ea96a2b79 294 Pfam PF02653 Branched-chain amino acid transport system / permease component 16 282 3.3E-38 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RR42_RS00515 4cdd6c2c2460ac811f5fd408b8693a3c 519 PANTHER PTHR10342:SF233 184 512 1.1E-157 T 23-04-2016 RR42_RS00515 4cdd6c2c2460ac811f5fd408b8693a3c 519 PANTHER PTHR10342:SF233 4 162 1.1E-157 T 23-04-2016 RR42_RS00515 4cdd6c2c2460ac811f5fd408b8693a3c 519 PANTHER PTHR10342 184 512 1.1E-157 T 23-04-2016 RR42_RS00515 4cdd6c2c2460ac811f5fd408b8693a3c 519 PANTHER PTHR10342 4 162 1.1E-157 T 23-04-2016 RR42_RS00515 4cdd6c2c2460ac811f5fd408b8693a3c 519 Gene3D G3DSA:3.30.1120.10 441 488 6.7E-8 T 23-04-2016 RR42_RS00515 4cdd6c2c2460ac811f5fd408b8693a3c 519 Pfam PF00884 Sulfatase 4 381 2.4E-50 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RR42_RS00515 4cdd6c2c2460ac811f5fd408b8693a3c 519 SUPERFAMILY SSF53649 4 241 4.06E-100 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RR42_RS00515 4cdd6c2c2460ac811f5fd408b8693a3c 519 SUPERFAMILY SSF53649 284 493 4.06E-100 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RR42_RS00515 4cdd6c2c2460ac811f5fd408b8693a3c 519 Gene3D G3DSA:3.40.720.10 278 440 7.0E-82 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RR42_RS00515 4cdd6c2c2460ac811f5fd408b8693a3c 519 Gene3D G3DSA:3.40.720.10 144 241 7.0E-82 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RR42_RS00515 4cdd6c2c2460ac811f5fd408b8693a3c 519 Gene3D G3DSA:3.40.720.10 4 104 7.0E-82 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RR42_RS10820 fd15dfb2dda8b24052f0ea696e82f070 345 Gene3D G3DSA:3.40.50.300 18 278 5.3E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS10820 fd15dfb2dda8b24052f0ea696e82f070 345 SMART SM00382 63 255 7.0E-20 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS10820 fd15dfb2dda8b24052f0ea696e82f070 345 Pfam PF00005 ABC transporter 55 205 7.5E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS10820 fd15dfb2dda8b24052f0ea696e82f070 345 PANTHER PTHR24220 51 343 2.3E-144 T 23-04-2016 RR42_RS10820 fd15dfb2dda8b24052f0ea696e82f070 345 PANTHER PTHR24220 19 29 2.3E-144 T 23-04-2016 RR42_RS10820 fd15dfb2dda8b24052f0ea696e82f070 345 SUPERFAMILY SSF52540 63 340 1.7E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS10820 fd15dfb2dda8b24052f0ea696e82f070 345 PANTHER PTHR24220:SF336 51 343 2.3E-144 T 23-04-2016 RR42_RS10820 fd15dfb2dda8b24052f0ea696e82f070 345 PANTHER PTHR24220:SF336 19 29 2.3E-144 T 23-04-2016 RR42_RS10820 fd15dfb2dda8b24052f0ea696e82f070 345 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 255 341 1.2E-27 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RR42_RS10820 fd15dfb2dda8b24052f0ea696e82f070 345 ProSitePatterns PS00211 ABC transporters family signature. 178 192 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS10820 fd15dfb2dda8b24052f0ea696e82f070 345 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 257 321 3.0E-18 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RR42_RS24180 8ab936a86f13d8decb5ea690f3b7ff1b 216 Gene3D G3DSA:3.30.360.10 99 215 1.3E-56 T 23-04-2016 RR42_RS24180 8ab936a86f13d8decb5ea690f3b7ff1b 216 PANTHER PTHR23429:SF0 2 214 7.7E-102 T 23-04-2016 RR42_RS24180 8ab936a86f13d8decb5ea690f3b7ff1b 216 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 101 215 3.7E-48 T 23-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RR42_RS24180 8ab936a86f13d8decb5ea690f3b7ff1b 216 Gene3D G3DSA:3.40.50.720 2 98 6.1E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS24180 8ab936a86f13d8decb5ea690f3b7ff1b 216 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 89 95 - T 23-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RR42_RS24180 8ab936a86f13d8decb5ea690f3b7ff1b 216 SUPERFAMILY SSF55347 89 215 3.27E-53 T 23-04-2016 RR42_RS24180 8ab936a86f13d8decb5ea690f3b7ff1b 216 PANTHER PTHR23429 2 214 7.7E-102 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RR42_RS24180 8ab936a86f13d8decb5ea690f3b7ff1b 216 SUPERFAMILY SSF51735 2 102 2.76E-30 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS24180 8ab936a86f13d8decb5ea690f3b7ff1b 216 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 55 68 3.8E-36 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RR42_RS24180 8ab936a86f13d8decb5ea690f3b7ff1b 216 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 79 107 3.8E-36 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RR42_RS24180 8ab936a86f13d8decb5ea690f3b7ff1b 216 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 131 148 3.8E-36 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RR42_RS24180 8ab936a86f13d8decb5ea690f3b7ff1b 216 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 149 165 3.8E-36 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RR42_RS24180 8ab936a86f13d8decb5ea690f3b7ff1b 216 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 2 99 3.3E-33 T 23-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RR42_RS04960 d5fe7b5e8e984d0ca7c5aa57454254bf 227 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 176 3.1E-14 T 23-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 RR42_RS04960 d5fe7b5e8e984d0ca7c5aa57454254bf 227 SMART SM00702 1 177 6.9E-20 T 23-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 RR42_RS04960 d5fe7b5e8e984d0ca7c5aa57454254bf 227 PANTHER PTHR41536:SF1 2 227 2.0E-120 T 23-04-2016 RR42_RS04960 d5fe7b5e8e984d0ca7c5aa57454254bf 227 PANTHER PTHR41536 2 227 2.0E-120 T 23-04-2016 RR42_RS04960 d5fe7b5e8e984d0ca7c5aa57454254bf 227 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 227 46.077 T 23-04-2016 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 RR42_RS10380 eb9fcd92bf8b3bbd081c82fcc634a9ac 286 PANTHER PTHR11795 1 284 8.9E-68 T 23-04-2016 RR42_RS10380 eb9fcd92bf8b3bbd081c82fcc634a9ac 286 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 273 3.2E-38 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RR42_RS33755 284a179658187090b8f1ca19751862ca 358 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 318 350 9.8E-7 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RR42_RS33755 284a179658187090b8f1ca19751862ca 358 Gene3D G3DSA:3.40.50.300 313 355 1.9E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS33755 284a179658187090b8f1ca19751862ca 358 SUPERFAMILY SSF52540 299 348 2.56E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18850 9f0da992c28e7647d474ea2dbd658e73 265 PANTHER PTHR30371 1 251 2.0E-97 T 23-04-2016 RR42_RS18850 9f0da992c28e7647d474ea2dbd658e73 265 Pfam PF00902 Sec-independent protein translocase protein (TatC) 24 234 8.2E-67 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RR42_RS18850 9f0da992c28e7647d474ea2dbd658e73 265 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 20 47 4.6E-45 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RR42_RS18850 9f0da992c28e7647d474ea2dbd658e73 265 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 167 195 4.6E-45 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RR42_RS18850 9f0da992c28e7647d474ea2dbd658e73 265 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 115 141 4.6E-45 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RR42_RS18850 9f0da992c28e7647d474ea2dbd658e73 265 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 97 115 4.6E-45 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RR42_RS18850 9f0da992c28e7647d474ea2dbd658e73 265 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 13 251 18.681 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RR42_RS18850 9f0da992c28e7647d474ea2dbd658e73 265 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 22 239 7.2E-68 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RR42_RS18850 9f0da992c28e7647d474ea2dbd658e73 265 PANTHER PTHR30371:SF0 1 251 2.0E-97 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RR42_RS04195 ae6dfabc66af204aa2960b9fda15d84e 365 Pfam PF05987 Bacterial protein of unknown function (DUF898) 23 358 2.7E-105 T 23-04-2016 IPR010295 Protein of unknown function DUF898 RR42_RS01515 e9bfd292c4294cbff527afbea028ef21 371 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 25 81 3.0E-12 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RR42_RS01515 e9bfd292c4294cbff527afbea028ef21 371 PANTHER PTHR21342:SF0 17 176 6.8E-83 T 23-04-2016 RR42_RS01515 e9bfd292c4294cbff527afbea028ef21 371 PANTHER PTHR21342:SF0 192 352 6.8E-83 T 23-04-2016 RR42_RS01515 e9bfd292c4294cbff527afbea028ef21 371 SUPERFAMILY SSF55811 214 360 5.55E-25 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RR42_RS01515 e9bfd292c4294cbff527afbea028ef21 371 Gene3D G3DSA:3.90.79.10 218 360 4.2E-31 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RR42_RS01515 e9bfd292c4294cbff527afbea028ef21 371 Pfam PF01467 Cytidylyltransferase-like 25 89 2.5E-10 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RR42_RS01515 e9bfd292c4294cbff527afbea028ef21 371 Gene3D G3DSA:3.40.50.620 22 211 6.0E-34 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS01515 e9bfd292c4294cbff527afbea028ef21 371 PANTHER PTHR21342 17 176 6.8E-83 T 23-04-2016 RR42_RS01515 e9bfd292c4294cbff527afbea028ef21 371 PANTHER PTHR21342 192 352 6.8E-83 T 23-04-2016 RR42_RS01515 e9bfd292c4294cbff527afbea028ef21 371 Pfam PF00293 NUDIX domain 236 346 2.1E-14 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RR42_RS01515 e9bfd292c4294cbff527afbea028ef21 371 SUPERFAMILY SSF52374 24 195 9.38E-18 T 23-04-2016 RR42_RS09620 1494001170d68fe213843ca291296b47 383 PANTHER PTHR39084 1 383 1.2E-29 T 23-04-2016 RR42_RS09620 1494001170d68fe213843ca291296b47 383 Pfam PF13194 Domain of unknown function (DUF4010) 140 352 2.2E-43 T 23-04-2016 IPR025105 Domain of unknown function DUF4010 RR42_RS16545 7b2006c3f55bf4cd651ccd70877a2229 154 Gene3D G3DSA:3.90.960.10 27 141 5.8E-18 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RR42_RS16545 7b2006c3f55bf4cd651ccd70877a2229 154 Pfam PF04073 Aminoacyl-tRNA editing domain 28 138 3.4E-20 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RR42_RS16545 7b2006c3f55bf4cd651ccd70877a2229 154 SUPERFAMILY SSF55826 8 141 1.83E-25 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RR42_RS00380 868db8a7afd3d54d54ef22e076484597 251 Pfam PF00392 Bacterial regulatory proteins, gntR family 29 89 4.4E-16 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS00380 868db8a7afd3d54d54ef22e076484597 251 SUPERFAMILY SSF46785 24 93 5.26E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS00380 868db8a7afd3d54d54ef22e076484597 251 Gene3D G3DSA:1.20.120.530 92 234 1.7E-20 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS00380 868db8a7afd3d54d54ef22e076484597 251 PANTHER PTHR11751 24 115 4.5E-25 T 23-04-2016 RR42_RS00380 868db8a7afd3d54d54ef22e076484597 251 Pfam PF07729 FCD domain 101 221 1.3E-17 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS00380 868db8a7afd3d54d54ef22e076484597 251 SMART SM00895 99 223 9.0E-9 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS00380 868db8a7afd3d54d54ef22e076484597 251 Gene3D G3DSA:1.10.10.10 17 91 5.6E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS00380 868db8a7afd3d54d54ef22e076484597 251 SUPERFAMILY SSF48008 95 229 1.52E-18 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS00380 868db8a7afd3d54d54ef22e076484597 251 SMART SM00345 31 89 4.9E-17 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS10225 9ebc3cbfcc1b267ad51a1d62fa6c7c5a 326 PANTHER PTHR32332:SF22 1 326 3.6E-184 T 23-04-2016 RR42_RS10225 9ebc3cbfcc1b267ad51a1d62fa6c7c5a 326 SUPERFAMILY SSF51412 1 316 1.22E-69 T 23-04-2016 RR42_RS10225 9ebc3cbfcc1b267ad51a1d62fa6c7c5a 326 PANTHER PTHR32332 1 326 3.6E-184 T 23-04-2016 RR42_RS10225 9ebc3cbfcc1b267ad51a1d62fa6c7c5a 326 Pfam PF03060 Nitronate monooxygenase 3 74 6.2E-20 T 23-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 RR42_RS10225 9ebc3cbfcc1b267ad51a1d62fa6c7c5a 326 Pfam PF03060 Nitronate monooxygenase 86 308 2.0E-38 T 23-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 RR42_RS10225 9ebc3cbfcc1b267ad51a1d62fa6c7c5a 326 Gene3D G3DSA:3.20.20.70 1 304 2.1E-74 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS12590 5c2e6983a33edecd3b361d1b0105ef67 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 146 2.1E-44 T 23-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS12590 5c2e6983a33edecd3b361d1b0105ef67 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 4.1E-21 T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal RR42_RS12590 5c2e6983a33edecd3b361d1b0105ef67 150 SUPERFAMILY SSF55653 60 147 3.14E-25 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal RR42_RS12590 5c2e6983a33edecd3b361d1b0105ef67 150 Gene3D G3DSA:3.40.5.10 1 52 3.9E-23 T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal RR42_RS12590 5c2e6983a33edecd3b361d1b0105ef67 150 SUPERFAMILY SSF55658 1 56 1.64E-17 T 23-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal RR42_RS12590 5c2e6983a33edecd3b361d1b0105ef67 150 PANTHER PTHR21368 1 146 2.8E-43 T 23-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS12590 5c2e6983a33edecd3b361d1b0105ef67 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.353 T 23-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS12590 5c2e6983a33edecd3b361d1b0105ef67 150 Gene3D G3DSA:3.10.430.100 61 148 2.7E-26 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal RR42_RS12590 5c2e6983a33edecd3b361d1b0105ef67 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal RR42_RS12590 5c2e6983a33edecd3b361d1b0105ef67 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 65 145 9.4E-25 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal RR42_RS01105 ee76f8c062b93a7f1631582ac50b7b83 170 Pfam PF04657 Putative inner membrane exporter, YdcZ 16 151 4.9E-35 T 23-04-2016 IPR006750 Putative inner membrane exporter, YdcZ RR42_RS01105 ee76f8c062b93a7f1631582ac50b7b83 170 PANTHER PTHR34821:SF1 17 170 1.6E-32 T 23-04-2016 RR42_RS01105 ee76f8c062b93a7f1631582ac50b7b83 170 PANTHER PTHR34821 17 170 1.6E-32 T 23-04-2016 RR42_RS14300 b3f24822eaa4f45eb349b6b7621f4ea2 286 PRINTS PR00164 ABC-2 type transport system membrane protein signature 208 227 3.7E-54 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RR42_RS14300 b3f24822eaa4f45eb349b6b7621f4ea2 286 PRINTS PR00164 ABC-2 type transport system membrane protein signature 228 247 3.7E-54 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RR42_RS14300 b3f24822eaa4f45eb349b6b7621f4ea2 286 PRINTS PR00164 ABC-2 type transport system membrane protein signature 134 159 3.7E-54 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RR42_RS14300 b3f24822eaa4f45eb349b6b7621f4ea2 286 PRINTS PR00164 ABC-2 type transport system membrane protein signature 171 195 3.7E-54 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RR42_RS14300 b3f24822eaa4f45eb349b6b7621f4ea2 286 PRINTS PR00164 ABC-2 type transport system membrane protein signature 59 80 3.7E-54 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RR42_RS14300 b3f24822eaa4f45eb349b6b7621f4ea2 286 PRINTS PR00164 ABC-2 type transport system membrane protein signature 89 111 3.7E-54 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RR42_RS14300 b3f24822eaa4f45eb349b6b7621f4ea2 286 PANTHER PTHR30413:SF7 33 286 2.8E-87 T 23-04-2016 RR42_RS14300 b3f24822eaa4f45eb349b6b7621f4ea2 286 TIGRFAM TIGR01291 nodJ: ABC-2 type transporter, NodJ family 35 284 6.6E-94 T 23-04-2016 IPR005981 ABC-2 type transporter, NodJ GO:0005215|GO:0009877|GO:0015772|GO:0016020 RR42_RS14300 b3f24822eaa4f45eb349b6b7621f4ea2 286 PIRSF PIRSF006648 2 285 1.8E-25 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RR42_RS14300 b3f24822eaa4f45eb349b6b7621f4ea2 286 Pfam PF01061 ABC-2 type transporter 40 251 2.6E-22 T 23-04-2016 IPR013525 ABC-2 type transporter GO:0016020 RR42_RS14300 b3f24822eaa4f45eb349b6b7621f4ea2 286 PANTHER PTHR30413 33 286 2.8E-87 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RR42_RS04310 fd689f02eb390228c68b709652de22d9 234 SUPERFAMILY SSF160443 147 230 3.4E-19 T 23-04-2016 IPR002625 Smr domain RR42_RS04310 fd689f02eb390228c68b709652de22d9 234 SMART SM00463 146 230 4.0E-14 T 23-04-2016 IPR002625 Smr domain RR42_RS04310 fd689f02eb390228c68b709652de22d9 234 Pfam PF01713 Smr domain 149 230 1.9E-25 T 23-04-2016 IPR002625 Smr domain RR42_RS04310 fd689f02eb390228c68b709652de22d9 234 PANTHER PTHR35562 46 230 5.3E-41 T 23-04-2016 RR42_RS00435 3a6d8a0e2ee119dabfa95884941b0cab 232 PANTHER PTHR26402:SF405 1 226 4.3E-64 T 23-04-2016 RR42_RS00435 3a6d8a0e2ee119dabfa95884941b0cab 232 SMART SM00448 1 113 4.6E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS00435 3a6d8a0e2ee119dabfa95884941b0cab 232 Gene3D G3DSA:3.40.50.2300 1 120 1.4E-30 T 23-04-2016 RR42_RS00435 3a6d8a0e2ee119dabfa95884941b0cab 232 SUPERFAMILY SSF52172 2 187 1.51E-32 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS00435 3a6d8a0e2ee119dabfa95884941b0cab 232 PANTHER PTHR26402 1 226 4.3E-64 T 23-04-2016 RR42_RS00435 3a6d8a0e2ee119dabfa95884941b0cab 232 SMART SM00862 149 225 2.4E-18 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS00435 3a6d8a0e2ee119dabfa95884941b0cab 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 7.2E-20 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS00435 3a6d8a0e2ee119dabfa95884941b0cab 232 Gene3D G3DSA:1.10.10.10 130 226 2.3E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS00435 3a6d8a0e2ee119dabfa95884941b0cab 232 Pfam PF00072 Response regulator receiver domain 5 112 1.7E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS09430 1567d5a1f9ca77510fdbe902b565af57 502 ProSitePatterns PS00455 Putative AMP-binding domain signature. 146 157 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS09430 1567d5a1f9ca77510fdbe902b565af57 502 Pfam PF00501 AMP-binding enzyme 7 400 9.2E-65 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS09430 1567d5a1f9ca77510fdbe902b565af57 502 Gene3D G3DSA:3.40.50.980 3 152 1.5E-25 T 23-04-2016 RR42_RS09430 1567d5a1f9ca77510fdbe902b565af57 502 Gene3D G3DSA:2.30.38.10 318 391 2.3E-15 T 23-04-2016 RR42_RS09430 1567d5a1f9ca77510fdbe902b565af57 502 Gene3D G3DSA:3.30.300.30 396 495 2.0E-30 T 23-04-2016 RR42_RS09430 1567d5a1f9ca77510fdbe902b565af57 502 SUPERFAMILY SSF56801 3 496 1.03E-117 T 23-04-2016 RR42_RS09430 1567d5a1f9ca77510fdbe902b565af57 502 Gene3D G3DSA:3.40.50.980 153 317 9.6E-32 T 23-04-2016 RR42_RS09430 1567d5a1f9ca77510fdbe902b565af57 502 Pfam PF13193 AMP-binding enzyme C-terminal domain 409 484 2.0E-14 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RR42_RS09430 1567d5a1f9ca77510fdbe902b565af57 502 PANTHER PTHR24096:SF106 34 502 4.1E-156 T 23-04-2016 RR42_RS09430 1567d5a1f9ca77510fdbe902b565af57 502 PANTHER PTHR24096 34 502 4.1E-156 T 23-04-2016 RR42_RS14530 ee72d5c940edcbc57820f6782f3041e4 138 SUPERFAMILY SSF52141 18 137 8.76E-22 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RR42_RS14530 ee72d5c940edcbc57820f6782f3041e4 138 Gene3D G3DSA:3.40.470.10 18 136 6.6E-19 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RR42_RS14530 ee72d5c940edcbc57820f6782f3041e4 138 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 17 133 1.7E-32 T 23-04-2016 IPR026353 Hypoxanthine-DNA glycosylase RR42_RS04720 caac2fac7c3c83d66aa6902eee56cf6c 252 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 25 83 5.9E-9 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RR42_RS04720 caac2fac7c3c83d66aa6902eee56cf6c 252 PANTHER PTHR39321 19 237 2.2E-30 T 23-04-2016 RR42_RS04720 caac2fac7c3c83d66aa6902eee56cf6c 252 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 26 234 2.7E-46 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 RR42_RS04720 caac2fac7c3c83d66aa6902eee56cf6c 252 Gene3D G3DSA:3.40.50.620 23 238 1.9E-68 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS04720 caac2fac7c3c83d66aa6902eee56cf6c 252 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 22 235 28.213 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 RR42_RS04720 caac2fac7c3c83d66aa6902eee56cf6c 252 Pfam PF01467 Cytidylyltransferase-like 26 209 4.6E-27 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RR42_RS04720 caac2fac7c3c83d66aa6902eee56cf6c 252 SUPERFAMILY SSF52374 21 235 3.85E-51 T 23-04-2016 RR42_RS10635 8379eae4a58a633cf1e041fe3a24ae1a 243 PANTHER PTHR33498 1 182 2.2E-17 T 23-04-2016 RR42_RS10635 8379eae4a58a633cf1e041fe3a24ae1a 243 PANTHER PTHR33498:SF1 1 182 2.2E-17 T 23-04-2016 RR42_RS10635 8379eae4a58a633cf1e041fe3a24ae1a 243 Pfam PF01610 Transposase 96 195 1.3E-7 T 23-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RR42_RS04395 02b48274f47011ec21d2126595ff9eda 265 SUPERFAMILY SSF53850 11 260 2.99E-70 T 23-04-2016 RR42_RS04395 02b48274f47011ec21d2126595ff9eda 265 Gene3D G3DSA:3.40.190.10 35 123 7.3E-45 T 23-04-2016 RR42_RS04395 02b48274f47011ec21d2126595ff9eda 265 Gene3D G3DSA:3.40.190.10 218 261 7.3E-45 T 23-04-2016 RR42_RS04395 02b48274f47011ec21d2126595ff9eda 265 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 61 74 - T 23-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 RR42_RS04395 02b48274f47011ec21d2126595ff9eda 265 PANTHER PTHR18966 24 260 1.8E-52 T 23-04-2016 RR42_RS04395 02b48274f47011ec21d2126595ff9eda 265 PANTHER PTHR18966:SF208 24 260 1.8E-52 T 23-04-2016 RR42_RS04395 02b48274f47011ec21d2126595ff9eda 265 SMART SM00062 38 259 7.3E-73 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RR42_RS04395 02b48274f47011ec21d2126595ff9eda 265 SMART SM00079 38 258 7.7E-4 T 23-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 RR42_RS04395 02b48274f47011ec21d2126595ff9eda 265 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 3.8E-67 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RR42_RS04395 02b48274f47011ec21d2126595ff9eda 265 Gene3D G3DSA:3.40.190.10 124 204 4.7E-25 T 23-04-2016 RR42_RS15255 57e55c963b7d8f7c6fcc50b1e8121f4a 115 Gene3D G3DSA:3.10.50.40 2 115 2.2E-47 T 23-04-2016 RR42_RS15255 57e55c963b7d8f7c6fcc50b1e8121f4a 115 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 20 113 1.0E-34 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RR42_RS15255 57e55c963b7d8f7c6fcc50b1e8121f4a 115 PANTHER PTHR10516 1 115 1.4E-58 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RR42_RS15255 57e55c963b7d8f7c6fcc50b1e8121f4a 115 SUPERFAMILY SSF54534 3 115 1.85E-43 T 23-04-2016 RR42_RS05655 1dea506a002c8822e8804659c5718cf8 290 Pfam PF01774 UreD urease accessory protein 57 263 3.2E-48 T 23-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 RR42_RS05655 1dea506a002c8822e8804659c5718cf8 290 Hamap MF_01384 Urease accessory protein UreD [ureD]. 16 274 29.764 T 23-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 RR42_RS05655 1dea506a002c8822e8804659c5718cf8 290 PANTHER PTHR33643 14 287 2.0E-38 T 23-04-2016 RR42_RS05655 1dea506a002c8822e8804659c5718cf8 290 PANTHER PTHR33643:SF1 14 287 2.0E-38 T 23-04-2016 RR42_RS01495 e000dd4734a9c3779646e72f7eb2e226 593 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 37 153 3.1E-7 T 23-04-2016 IPR000014 PAS domain RR42_RS01495 e000dd4734a9c3779646e72f7eb2e226 593 PANTHER PTHR33121 306 576 7.4E-80 T 23-04-2016 RR42_RS01495 e000dd4734a9c3779646e72f7eb2e226 593 Pfam PF00990 Diguanylate cyclase, GGDEF domain 158 314 8.4E-39 T 23-04-2016 IPR000160 GGDEF domain RR42_RS01495 e000dd4734a9c3779646e72f7eb2e226 593 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 156 317 7.6E-36 T 23-04-2016 IPR000160 GGDEF domain RR42_RS01495 e000dd4734a9c3779646e72f7eb2e226 593 SUPERFAMILY SSF141868 333 577 7.19E-85 T 23-04-2016 IPR001633 EAL domain RR42_RS01495 e000dd4734a9c3779646e72f7eb2e226 593 SMART SM00267 146 318 5.8E-50 T 23-04-2016 IPR000160 GGDEF domain RR42_RS01495 e000dd4734a9c3779646e72f7eb2e226 593 SUPERFAMILY SSF55073 162 320 4.24E-44 T 23-04-2016 IPR029787 Nucleotide cyclase RR42_RS01495 e000dd4734a9c3779646e72f7eb2e226 593 Pfam PF00563 EAL domain 335 567 4.1E-71 T 23-04-2016 IPR001633 EAL domain RR42_RS01495 e000dd4734a9c3779646e72f7eb2e226 593 SMART SM00091 33 99 0.0017 T 23-04-2016 IPR000014 PAS domain RR42_RS01495 e000dd4734a9c3779646e72f7eb2e226 593 Pfam PF00989 PAS fold 37 142 1.5E-10 T 23-04-2016 IPR013767 PAS fold GO:0006355 RR42_RS01495 e000dd4734a9c3779646e72f7eb2e226 593 Gene3D G3DSA:3.20.20.450 332 578 1.2E-91 T 23-04-2016 IPR001633 EAL domain RR42_RS01495 e000dd4734a9c3779646e72f7eb2e226 593 Gene3D G3DSA:3.30.450.20 37 144 2.9E-11 T 23-04-2016 RR42_RS01495 e000dd4734a9c3779646e72f7eb2e226 593 Gene3D G3DSA:3.30.70.270 159 325 3.2E-51 T 23-04-2016 RR42_RS01495 e000dd4734a9c3779646e72f7eb2e226 593 PANTHER PTHR33121:SF13 306 576 7.4E-80 T 23-04-2016 RR42_RS01495 e000dd4734a9c3779646e72f7eb2e226 593 SUPERFAMILY SSF55785 36 144 2.66E-11 T 23-04-2016 IPR000014 PAS domain RR42_RS01495 e000dd4734a9c3779646e72f7eb2e226 593 SMART SM00052 328 573 3.2E-103 T 23-04-2016 IPR001633 EAL domain RR42_RS15135 c84da860193348bea428c46cda67679c 292 SUPERFAMILY SSF46785 1 109 6.53E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS15135 c84da860193348bea428c46cda67679c 292 PANTHER PTHR30126 1 282 2.1E-88 T 23-04-2016 RR42_RS15135 c84da860193348bea428c46cda67679c 292 Pfam PF03466 LysR substrate binding domain 86 282 1.1E-42 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS15135 c84da860193348bea428c46cda67679c 292 PANTHER PTHR30126:SF31 1 282 2.1E-88 T 23-04-2016 RR42_RS15135 c84da860193348bea428c46cda67679c 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.3E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS15135 c84da860193348bea428c46cda67679c 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.3E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS15135 c84da860193348bea428c46cda67679c 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.3E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS15135 c84da860193348bea428c46cda67679c 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.7E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS15135 c84da860193348bea428c46cda67679c 292 Gene3D G3DSA:1.10.10.10 1 82 1.4E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS15135 c84da860193348bea428c46cda67679c 292 SUPERFAMILY SSF53850 87 285 2.64E-39 T 23-04-2016 RR42_RS15135 c84da860193348bea428c46cda67679c 292 Gene3D G3DSA:3.40.190.10 189 244 4.6E-13 T 23-04-2016 RR42_RS15135 c84da860193348bea428c46cda67679c 292 Gene3D G3DSA:3.40.190.10 87 188 9.0E-28 T 23-04-2016 RR42_RS07585 ff392b9e5cfa934d34fd9d639140671e 276 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 17 260 8.9E-91 T 23-04-2016 IPR017689 Outer membrane protein assembly factor BamD RR42_RS07585 ff392b9e5cfa934d34fd9d639140671e 276 Gene3D G3DSA:1.25.40.10 45 231 9.4E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS07585 ff392b9e5cfa934d34fd9d639140671e 276 SUPERFAMILY SSF48452 45 127 1.78E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS07585 ff392b9e5cfa934d34fd9d639140671e 276 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 12 256 46.218 T 23-04-2016 IPR017689 Outer membrane protein assembly factor BamD RR42_RS07585 ff392b9e5cfa934d34fd9d639140671e 276 PANTHER PTHR37423 4 262 4.5E-80 T 23-04-2016 RR42_RS07585 ff392b9e5cfa934d34fd9d639140671e 276 Pfam PF13525 Outer membrane lipoprotein 45 248 1.1E-64 T 23-04-2016 RR42_RS03165 af0f6027927c9e2dc3332ed5e6ad4b0b 340 PANTHER PTHR30160 1 339 4.1E-83 T 23-04-2016 RR42_RS03165 af0f6027927c9e2dc3332ed5e6ad4b0b 340 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 3 337 5.8E-139 T 23-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 RR42_RS03165 af0f6027927c9e2dc3332ed5e6ad4b0b 340 Gene3D G3DSA:3.40.50.2000 2 150 1.1E-48 T 23-04-2016 RR42_RS03165 af0f6027927c9e2dc3332ed5e6ad4b0b 340 PANTHER PTHR30160:SF7 1 339 4.1E-83 T 23-04-2016 RR42_RS03165 af0f6027927c9e2dc3332ed5e6ad4b0b 340 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 71 317 5.2E-64 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 RR42_RS03165 af0f6027927c9e2dc3332ed5e6ad4b0b 340 Gene3D G3DSA:3.40.50.2000 166 338 1.4E-54 T 23-04-2016 RR42_RS03165 af0f6027927c9e2dc3332ed5e6ad4b0b 340 SUPERFAMILY SSF53756 2 338 3.14E-95 T 23-04-2016 RR42_RS16420 99c99d6c08a51d98ee7396000f5e75e9 297 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 284 7.7E-22 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS16420 99c99d6c08a51d98ee7396000f5e75e9 297 PANTHER PTHR22912:SF159 3 288 2.8E-63 T 23-04-2016 RR42_RS16420 99c99d6c08a51d98ee7396000f5e75e9 297 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 2.1E-7 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RR42_RS16420 99c99d6c08a51d98ee7396000f5e75e9 297 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 258 276 2.1E-7 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RR42_RS16420 99c99d6c08a51d98ee7396000f5e75e9 297 Gene3D G3DSA:3.50.50.60 3 125 1.1E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS16420 99c99d6c08a51d98ee7396000f5e75e9 297 Gene3D G3DSA:3.50.50.60 247 292 1.1E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS16420 99c99d6c08a51d98ee7396000f5e75e9 297 SUPERFAMILY SSF51905 3 290 4.82E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS16420 99c99d6c08a51d98ee7396000f5e75e9 297 PANTHER PTHR22912 3 288 2.8E-63 T 23-04-2016 RR42_RS16420 99c99d6c08a51d98ee7396000f5e75e9 297 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 248 270 3.0E-12 T 23-04-2016 RR42_RS16420 99c99d6c08a51d98ee7396000f5e75e9 297 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 3.0E-12 T 23-04-2016 RR42_RS16420 99c99d6c08a51d98ee7396000f5e75e9 297 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 3.0E-12 T 23-04-2016 RR42_RS16420 99c99d6c08a51d98ee7396000f5e75e9 297 Gene3D G3DSA:3.50.50.60 126 223 1.7E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS10245 fd18de2e9e481e4f21a39e7441a61ee9 152 Gene3D G3DSA:3.10.129.10 15 148 6.7E-36 T 23-04-2016 IPR029069 HotDog domain RR42_RS10245 fd18de2e9e481e4f21a39e7441a61ee9 152 PANTHER PTHR13078 15 148 1.5E-35 T 23-04-2016 RR42_RS10245 fd18de2e9e481e4f21a39e7441a61ee9 152 SUPERFAMILY SSF54637 8 148 1.65E-38 T 23-04-2016 IPR029069 HotDog domain RR42_RS10245 fd18de2e9e481e4f21a39e7441a61ee9 152 Pfam PF01575 MaoC like domain 15 123 1.6E-25 T 23-04-2016 IPR002539 MaoC-like domain RR42_RS14590 43e0a5fa00db5846d5eb367b086ac4fb 109 Gene3D G3DSA:2.60.120.10 22 108 1.4E-7 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS14590 43e0a5fa00db5846d5eb367b086ac4fb 109 SUPERFAMILY SSF51182 29 106 4.61E-10 T 23-04-2016 IPR011051 RmlC-like cupin domain RR42_RS04525 f9c316bcfcc57dc088a0ccba10f8e200 125 Pfam PF12836 Helix-hairpin-helix motif 30 87 7.1E-14 T 23-04-2016 RR42_RS04525 f9c316bcfcc57dc088a0ccba10f8e200 125 SUPERFAMILY SSF47781 25 96 6.89E-18 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RR42_RS04525 f9c316bcfcc57dc088a0ccba10f8e200 125 Gene3D G3DSA:1.10.150.280 26 91 3.8E-18 T 23-04-2016 RR42_RS04525 f9c316bcfcc57dc088a0ccba10f8e200 125 PANTHER PTHR21180 15 87 3.9E-13 T 23-04-2016 RR42_RS03745 c1bc3de58be6c0779bf92c3e662ca97d 365 Gene3D G3DSA:1.10.10.10 1 131 6.0E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS03745 c1bc3de58be6c0779bf92c3e662ca97d 365 PANTHER PTHR38431 140 354 2.0E-31 T 23-04-2016 RR42_RS03745 c1bc3de58be6c0779bf92c3e662ca97d 365 SUPERFAMILY SSF46785 27 143 2.09E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS03745 c1bc3de58be6c0779bf92c3e662ca97d 365 Gene3D G3DSA:3.40.190.10 221 308 4.1E-12 T 23-04-2016 RR42_RS03745 c1bc3de58be6c0779bf92c3e662ca97d 365 Pfam PF12727 PBP superfamily domain 145 324 7.1E-56 T 23-04-2016 IPR024370 PBP domain RR42_RS03745 c1bc3de58be6c0779bf92c3e662ca97d 365 SUPERFAMILY SSF53850 129 305 5.18E-14 T 23-04-2016 RR42_RS03745 c1bc3de58be6c0779bf92c3e662ca97d 365 Gene3D G3DSA:3.40.190.10 141 220 7.5E-4 T 23-04-2016 RR42_RS06060 729d92f72fea79ac5088fde03e3d7032 64 SUPERFAMILY SSF140319 1 62 5.23E-27 T 23-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RR42_RS06060 729d92f72fea79ac5088fde03e3d7032 64 PANTHER PTHR37532 1 64 6.3E-28 T 23-04-2016 RR42_RS06060 729d92f72fea79ac5088fde03e3d7032 64 PIRSF PIRSF039003 1 64 1.7E-33 T 23-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RR42_RS06060 729d92f72fea79ac5088fde03e3d7032 64 Gene3D G3DSA:1.10.10.600 1 64 2.5E-33 T 23-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RR42_RS06060 729d92f72fea79ac5088fde03e3d7032 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 1.3E-33 T 23-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RR42_RS06060 729d92f72fea79ac5088fde03e3d7032 64 Pfam PF04384 Iron-sulphur cluster assembly 1 64 3.0E-33 T 23-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RR42_RS06060 729d92f72fea79ac5088fde03e3d7032 64 PANTHER PTHR37532:SF1 1 64 6.3E-28 T 23-04-2016 RR42_RS04170 5be85c9064ec04a1178779b72f0285c0 341 Pfam PF00535 Glycosyl transferase family 2 11 172 1.3E-29 T 23-04-2016 IPR001173 Glycosyltransferase 2-like RR42_RS04170 5be85c9064ec04a1178779b72f0285c0 341 PANTHER PTHR10859:SF81 8 340 1.2E-146 T 23-04-2016 RR42_RS04170 5be85c9064ec04a1178779b72f0285c0 341 Gene3D G3DSA:3.90.550.10 8 134 1.4E-22 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RR42_RS04170 5be85c9064ec04a1178779b72f0285c0 341 SUPERFAMILY SSF53448 8 258 1.41E-36 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RR42_RS04170 5be85c9064ec04a1178779b72f0285c0 341 PANTHER PTHR10859 8 340 1.2E-146 T 23-04-2016 RR42_RS17615 e0d92c86a3a8c62c6353585281351124 326 PANTHER PTHR30270:SF0 7 326 2.6E-103 T 23-04-2016 RR42_RS17615 e0d92c86a3a8c62c6353585281351124 326 SUPERFAMILY SSF55326 6 142 2.79E-35 T 23-04-2016 RR42_RS17615 e0d92c86a3a8c62c6353585281351124 326 Gene3D G3DSA:3.90.650.10 148 323 5.7E-41 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RR42_RS17615 e0d92c86a3a8c62c6353585281351124 326 Gene3D G3DSA:3.30.1330.10 7 142 3.2E-46 T 23-04-2016 IPR016188 PurM-like, N-terminal domain RR42_RS17615 e0d92c86a3a8c62c6353585281351124 326 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 11 323 1.7E-96 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 RR42_RS17615 e0d92c86a3a8c62c6353585281351124 326 SUPERFAMILY SSF56042 145 310 5.06E-36 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RR42_RS17615 e0d92c86a3a8c62c6353585281351124 326 PANTHER PTHR30270 7 326 2.6E-103 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 RR42_RS17615 e0d92c86a3a8c62c6353585281351124 326 PIRSF PIRSF005303 4 323 7.3E-79 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 RR42_RS17615 e0d92c86a3a8c62c6353585281351124 326 Pfam PF00586 AIR synthase related protein, N-terminal domain 32 140 7.4E-26 T 23-04-2016 IPR016188 PurM-like, N-terminal domain RR42_RS17615 e0d92c86a3a8c62c6353585281351124 326 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 9 320 29.246 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 RR42_RS17615 e0d92c86a3a8c62c6353585281351124 326 Pfam PF02769 AIR synthase related protein, C-terminal domain 200 306 4.2E-6 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RR42_RS31165 99fc9dddbff6f513af6cc577a42063f9 369 Pfam PF00375 Sodium:dicarboxylate symporter family 73 369 1.5E-70 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS31165 99fc9dddbff6f513af6cc577a42063f9 369 Gene3D G3DSA:1.10.3860.10 69 369 3.3E-71 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS31165 99fc9dddbff6f513af6cc577a42063f9 369 PANTHER PTHR11958 68 369 8.7E-84 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS31165 99fc9dddbff6f513af6cc577a42063f9 369 PRINTS PR00173 Glutamate-aspartate symporter signature 215 237 1.3E-27 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS31165 99fc9dddbff6f513af6cc577a42063f9 369 PRINTS PR00173 Glutamate-aspartate symporter signature 118 138 1.3E-27 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS31165 99fc9dddbff6f513af6cc577a42063f9 369 PRINTS PR00173 Glutamate-aspartate symporter signature 363 369 1.3E-27 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS31165 99fc9dddbff6f513af6cc577a42063f9 369 PRINTS PR00173 Glutamate-aspartate symporter signature 71 91 1.3E-27 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS31165 99fc9dddbff6f513af6cc577a42063f9 369 PRINTS PR00173 Glutamate-aspartate symporter signature 148 173 1.3E-27 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS31165 99fc9dddbff6f513af6cc577a42063f9 369 PRINTS PR00173 Glutamate-aspartate symporter signature 263 282 1.3E-27 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS31165 99fc9dddbff6f513af6cc577a42063f9 369 PANTHER PTHR11958:SF26 68 369 8.7E-84 T 23-04-2016 IPR033380 Glutamate-aspartate symport protein GltP/GltT GO:0015293|GO:0015810|GO:0015813|GO:0016021 RR42_RS31165 99fc9dddbff6f513af6cc577a42063f9 369 SUPERFAMILY SSF118215 73 369 1.7E-71 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RR42_RS01865 3c19fbaafc35cb433b478e497178a594 337 SUPERFAMILY SSF53335 66 297 9.69E-35 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS01865 3c19fbaafc35cb433b478e497178a594 337 Gene3D G3DSA:3.40.50.150 65 308 7.7E-35 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS01865 3c19fbaafc35cb433b478e497178a594 337 Pfam PF08241 Methyltransferase domain 81 189 4.9E-22 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RR42_RS01865 3c19fbaafc35cb433b478e497178a594 337 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 36 308 26.743 T 23-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 RR42_RS01865 3c19fbaafc35cb433b478e497178a594 337 PANTHER PTHR13090 57 327 2.7E-28 T 23-04-2016 RR42_RS01865 3c19fbaafc35cb433b478e497178a594 337 PANTHER PTHR13090:SF3 57 327 2.7E-28 T 23-04-2016 RR42_RS07915 7682adf1c5bd59453ec516ca098b33d9 1037 Gene3D G3DSA:3.30.2090.10 190 272 8.1E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS07915 7682adf1c5bd59453ec516ca098b33d9 1037 Gene3D G3DSA:3.30.2090.10 721 805 2.0E-17 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS07915 7682adf1c5bd59453ec516ca098b33d9 1037 Gene3D G3DSA:1.10.3850.10 811 1024 1.5E-50 T 23-04-2016 RR42_RS07915 7682adf1c5bd59453ec516ca098b33d9 1037 Gene3D G3DSA:1.10.3850.10 281 507 5.9E-41 T 23-04-2016 RR42_RS07915 7682adf1c5bd59453ec516ca098b33d9 1037 Pfam PF00873 AcrB/AcrD/AcrF family 10 1020 5.8E-168 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS07915 7682adf1c5bd59453ec516ca098b33d9 1037 SUPERFAMILY SSF82714 721 804 6.93E-17 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS07915 7682adf1c5bd59453ec516ca098b33d9 1037 SUPERFAMILY SSF82693 45 140 1.17E-18 T 23-04-2016 RR42_RS07915 7682adf1c5bd59453ec516ca098b33d9 1037 PANTHER PTHR32063:SF18 5 1029 0.0 T 23-04-2016 RR42_RS07915 7682adf1c5bd59453ec516ca098b33d9 1037 PRINTS PR00702 Acriflavin resistance protein family signature 453 476 1.7E-19 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS07915 7682adf1c5bd59453ec516ca098b33d9 1037 PRINTS PR00702 Acriflavin resistance protein family signature 372 393 1.7E-19 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS07915 7682adf1c5bd59453ec516ca098b33d9 1037 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 1.7E-19 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS07915 7682adf1c5bd59453ec516ca098b33d9 1037 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 1.7E-19 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS07915 7682adf1c5bd59453ec516ca098b33d9 1037 PRINTS PR00702 Acriflavin resistance protein family signature 478 501 1.7E-19 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS07915 7682adf1c5bd59453ec516ca098b33d9 1037 PRINTS PR00702 Acriflavin resistance protein family signature 400 424 1.7E-19 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS07915 7682adf1c5bd59453ec516ca098b33d9 1037 SUPERFAMILY SSF82693 275 329 1.12E-18 T 23-04-2016 RR42_RS07915 7682adf1c5bd59453ec516ca098b33d9 1037 SUPERFAMILY SSF82693 141 187 1.12E-18 T 23-04-2016 RR42_RS07915 7682adf1c5bd59453ec516ca098b33d9 1037 Gene3D G3DSA:3.30.70.1430 572 658 8.6E-4 T 23-04-2016 RR42_RS07915 7682adf1c5bd59453ec516ca098b33d9 1037 SUPERFAMILY SSF82866 299 505 5.23E-34 T 23-04-2016 RR42_RS07915 7682adf1c5bd59453ec516ca098b33d9 1037 PANTHER PTHR32063 5 1029 0.0 T 23-04-2016 RR42_RS07915 7682adf1c5bd59453ec516ca098b33d9 1037 SUPERFAMILY SSF82866 805 1026 3.4E-45 T 23-04-2016 RR42_RS07915 7682adf1c5bd59453ec516ca098b33d9 1037 Gene3D G3DSA:3.30.70.1430 45 143 2.7E-21 T 23-04-2016 RR42_RS07915 7682adf1c5bd59453ec516ca098b33d9 1037 SUPERFAMILY SSF82714 190 271 4.32E-13 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS02175 cfed0e14235c754885f009b2f0cef44d 541 Gene3D G3DSA:3.40.50.970 334 531 1.1E-43 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS02175 cfed0e14235c754885f009b2f0cef44d 541 PANTHER PTHR18968 7 531 7.6E-109 T 23-04-2016 RR42_RS02175 cfed0e14235c754885f009b2f0cef44d 541 Gene3D G3DSA:3.40.50.1220 185 331 5.5E-18 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RR42_RS02175 cfed0e14235c754885f009b2f0cef44d 541 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 171 1.8E-48 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RR42_RS02175 cfed0e14235c754885f009b2f0cef44d 541 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 195 302 1.4E-11 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RR42_RS02175 cfed0e14235c754885f009b2f0cef44d 541 SUPERFAMILY SSF52467 156 348 1.84E-21 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RR42_RS02175 cfed0e14235c754885f009b2f0cef44d 541 Gene3D G3DSA:3.40.50.970 5 173 7.3E-53 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS02175 cfed0e14235c754885f009b2f0cef44d 541 SUPERFAMILY SSF52518 359 533 1.67E-39 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS02175 cfed0e14235c754885f009b2f0cef44d 541 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 383 528 2.7E-27 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RR42_RS02175 cfed0e14235c754885f009b2f0cef44d 541 SUPERFAMILY SSF52518 6 171 2.27E-44 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS18915 b350fe04c71f94cdeedfdb9823d6102a 445 Gene3D G3DSA:3.40.50.1980 37 254 1.6E-81 T 23-04-2016 RR42_RS18915 b350fe04c71f94cdeedfdb9823d6102a 445 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 15 442 42.503 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RR42_RS18915 b350fe04c71f94cdeedfdb9823d6102a 445 PRINTS PR00083 Histidinol dehydrogenase signature 266 285 1.3E-84 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RR42_RS18915 b350fe04c71f94cdeedfdb9823d6102a 445 PRINTS PR00083 Histidinol dehydrogenase signature 244 265 1.3E-84 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RR42_RS18915 b350fe04c71f94cdeedfdb9823d6102a 445 PRINTS PR00083 Histidinol dehydrogenase signature 215 240 1.3E-84 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RR42_RS18915 b350fe04c71f94cdeedfdb9823d6102a 445 PRINTS PR00083 Histidinol dehydrogenase signature 185 211 1.3E-84 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RR42_RS18915 b350fe04c71f94cdeedfdb9823d6102a 445 PRINTS PR00083 Histidinol dehydrogenase signature 43 67 1.3E-84 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RR42_RS18915 b350fe04c71f94cdeedfdb9823d6102a 445 PRINTS PR00083 Histidinol dehydrogenase signature 335 360 1.3E-84 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RR42_RS18915 b350fe04c71f94cdeedfdb9823d6102a 445 PRINTS PR00083 Histidinol dehydrogenase signature 376 394 1.3E-84 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RR42_RS18915 b350fe04c71f94cdeedfdb9823d6102a 445 PRINTS PR00083 Histidinol dehydrogenase signature 151 177 1.3E-84 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RR42_RS18915 b350fe04c71f94cdeedfdb9823d6102a 445 PIRSF PIRSF000099 7 445 1.2E-161 T 23-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RR42_RS18915 b350fe04c71f94cdeedfdb9823d6102a 445 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 43 441 2.0E-162 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RR42_RS18915 b350fe04c71f94cdeedfdb9823d6102a 445 Pfam PF00815 Histidinol dehydrogenase 35 442 9.7E-171 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RR42_RS18915 b350fe04c71f94cdeedfdb9823d6102a 445 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 244 276 - T 23-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RR42_RS18915 b350fe04c71f94cdeedfdb9823d6102a 445 PANTHER PTHR21256 9 445 1.5E-202 T 23-04-2016 RR42_RS18915 b350fe04c71f94cdeedfdb9823d6102a 445 SUPERFAMILY SSF53720 34 442 1.84E-87 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RR42_RS10315 cfe6a2a4b418738c2965010554cf462a 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 247 8.1E-49 T 23-04-2016 RR42_RS10315 cfe6a2a4b418738c2965010554cf462a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 9.8E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10315 cfe6a2a4b418738c2965010554cf462a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 9.8E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10315 cfe6a2a4b418738c2965010554cf462a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 9.8E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10315 cfe6a2a4b418738c2965010554cf462a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 9.8E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10315 cfe6a2a4b418738c2965010554cf462a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 9.8E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10315 cfe6a2a4b418738c2965010554cf462a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 9.8E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10315 cfe6a2a4b418738c2965010554cf462a 253 Gene3D G3DSA:3.40.50.720 5 247 1.6E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10315 cfe6a2a4b418738c2965010554cf462a 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 8.3E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10315 cfe6a2a4b418738c2965010554cf462a 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 8.3E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10315 cfe6a2a4b418738c2965010554cf462a 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 8.3E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10315 cfe6a2a4b418738c2965010554cf462a 253 SUPERFAMILY SSF51735 4 247 1.99E-65 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10315 cfe6a2a4b418738c2965010554cf462a 253 PANTHER PTHR24322 148 179 8.7E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10315 cfe6a2a4b418738c2965010554cf462a 253 PANTHER PTHR24322 7 132 8.7E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS02795 75b5190dca1934db77521ff6860b704a 284 Pfam PF00892 EamA-like transporter family 2 128 6.9E-14 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS02795 75b5190dca1934db77521ff6860b704a 284 Pfam PF00892 EamA-like transporter family 145 281 3.7E-15 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS02795 75b5190dca1934db77521ff6860b704a 284 PANTHER PTHR22911 1 284 2.4E-94 T 23-04-2016 RR42_RS02795 75b5190dca1934db77521ff6860b704a 284 SUPERFAMILY SSF103481 180 283 1.29E-11 T 23-04-2016 RR42_RS02795 75b5190dca1934db77521ff6860b704a 284 PANTHER PTHR22911:SF63 1 284 2.4E-94 T 23-04-2016 RR42_RS02795 75b5190dca1934db77521ff6860b704a 284 SUPERFAMILY SSF103481 31 131 4.32E-13 T 23-04-2016 RR42_RS37555 1d6aa1ff7d55b92c30a10eb76e094355 329 SUPERFAMILY SSF55040 22 80 2.48E-12 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 RR42_RS37555 1d6aa1ff7d55b92c30a10eb76e094355 329 Pfam PF01967 MoaC family 11 60 1.2E-10 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 RR42_RS37555 1d6aa1ff7d55b92c30a10eb76e094355 329 Gene3D G3DSA:3.30.70.640 22 60 2.3E-10 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 RR42_RS14680 2f960e7280abf70302a6a9035a5eac8f 410 SUPERFAMILY SSF103473 7 398 3.14E-57 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS14680 2f960e7280abf70302a6a9035a5eac8f 410 Pfam PF07690 Major Facilitator Superfamily 20 325 3.2E-28 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS14680 2f960e7280abf70302a6a9035a5eac8f 410 PANTHER PTHR11360:SF115 10 406 1.9E-127 T 23-04-2016 RR42_RS14680 2f960e7280abf70302a6a9035a5eac8f 410 PANTHER PTHR11360 10 406 1.9E-127 T 23-04-2016 RR42_RS14680 2f960e7280abf70302a6a9035a5eac8f 410 Gene3D G3DSA:1.20.1250.20 18 199 6.6E-21 T 23-04-2016 RR42_RS14680 2f960e7280abf70302a6a9035a5eac8f 410 Gene3D G3DSA:1.20.1250.20 214 398 1.6E-20 T 23-04-2016 RR42_RS06505 8d4c995a30473b570dc641492f6122e2 296 Gene3D G3DSA:2.40.10.220 198 283 1.6E-4 T 23-04-2016 RR42_RS06505 8d4c995a30473b570dc641492f6122e2 296 Gene3D G3DSA:2.30.110.10 82 168 7.8E-6 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RR42_RS06505 8d4c995a30473b570dc641492f6122e2 296 SUPERFAMILY SSF141371 75 169 2.94E-14 T 23-04-2016 RR42_RS06505 8d4c995a30473b570dc641492f6122e2 296 Pfam PF07238 PilZ domain 168 283 6.2E-9 T 23-04-2016 IPR009875 PilZ domain GO:0035438 RR42_RS06505 8d4c995a30473b570dc641492f6122e2 296 Pfam PF12945 Flagellar protein YcgR 77 159 2.9E-15 T 23-04-2016 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal RR42_RS20380 2ac0ceb7a5643a5e3bb50caaeaaa95c4 539 SMART SM00387 407 535 3.7E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS20380 2ac0ceb7a5643a5e3bb50caaeaaa95c4 539 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 412 532 4.8E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS20380 2ac0ceb7a5643a5e3bb50caaeaaa95c4 539 Gene3D G3DSA:1.10.287.130 278 347 2.0E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS20380 2ac0ceb7a5643a5e3bb50caaeaaa95c4 539 SMART SM00388 286 351 3.6E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS20380 2ac0ceb7a5643a5e3bb50caaeaaa95c4 539 Pfam PF08521 Two-component sensor kinase N-terminal 54 209 8.7E-29 T 23-04-2016 IPR013727 Two-component sensor kinase, N-terminal RR42_RS20380 2ac0ceb7a5643a5e3bb50caaeaaa95c4 539 Pfam PF00512 His Kinase A (phospho-acceptor) domain 287 351 1.1E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS20380 2ac0ceb7a5643a5e3bb50caaeaaa95c4 539 Gene3D G3DSA:3.30.565.10 361 535 5.3E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS20380 2ac0ceb7a5643a5e3bb50caaeaaa95c4 539 SUPERFAMILY SSF47384 269 350 3.53E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS20380 2ac0ceb7a5643a5e3bb50caaeaaa95c4 539 SUPERFAMILY SSF55874 340 533 6.55E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS20380 2ac0ceb7a5643a5e3bb50caaeaaa95c4 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 506 3.7E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS20380 2ac0ceb7a5643a5e3bb50caaeaaa95c4 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 462 3.7E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS20380 2ac0ceb7a5643a5e3bb50caaeaaa95c4 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 532 3.7E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS20380 2ac0ceb7a5643a5e3bb50caaeaaa95c4 539 PANTHER PTHR24423 224 534 5.2E-56 T 23-04-2016 RR42_RS20380 2ac0ceb7a5643a5e3bb50caaeaaa95c4 539 PANTHER PTHR24423 1 12 5.2E-56 T 23-04-2016 RR42_RS20380 2ac0ceb7a5643a5e3bb50caaeaaa95c4 539 PANTHER PTHR24423:SF474 224 534 5.2E-56 T 23-04-2016 RR42_RS20380 2ac0ceb7a5643a5e3bb50caaeaaa95c4 539 PANTHER PTHR24423:SF474 1 12 5.2E-56 T 23-04-2016 RR42_RS04405 7ab6f5e0bbb4c1d75ac524dee883a0c3 856 Pfam PF02875 Mur ligase family, glutamate ligase domain 711 791 4.7E-12 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RR42_RS04405 7ab6f5e0bbb4c1d75ac524dee883a0c3 856 Gene3D G3DSA:3.90.190.20 713 838 1.7E-23 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RR42_RS04405 7ab6f5e0bbb4c1d75ac524dee883a0c3 856 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 473 496 - T 23-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 RR42_RS04405 7ab6f5e0bbb4c1d75ac524dee883a0c3 856 SUPERFAMILY SSF56059 204 334 1.04E-36 T 23-04-2016 RR42_RS04405 7ab6f5e0bbb4c1d75ac524dee883a0c3 856 SUPERFAMILY SSF56059 370 461 1.04E-36 T 23-04-2016 RR42_RS04405 7ab6f5e0bbb4c1d75ac524dee883a0c3 856 SUPERFAMILY SSF53623 433 723 2.75E-42 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS04405 7ab6f5e0bbb4c1d75ac524dee883a0c3 856 SUPERFAMILY SSF53244 711 838 1.33E-24 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RR42_RS04405 7ab6f5e0bbb4c1d75ac524dee883a0c3 856 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 204 295 6.1E-8 T 23-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RR42_RS04405 7ab6f5e0bbb4c1d75ac524dee883a0c3 856 PANTHER PTHR23135 376 856 5.9E-120 T 23-04-2016 RR42_RS04405 7ab6f5e0bbb4c1d75ac524dee883a0c3 856 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 2 853 0.0 T 23-04-2016 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 RR42_RS04405 7ab6f5e0bbb4c1d75ac524dee883a0c3 856 PANTHER PTHR23135:SF18 376 856 5.9E-120 T 23-04-2016 RR42_RS04405 7ab6f5e0bbb4c1d75ac524dee883a0c3 856 Pfam PF08245 Mur ligase middle domain 475 686 5.7E-20 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS04405 7ab6f5e0bbb4c1d75ac524dee883a0c3 856 Gene3D G3DSA:3.30.470.20 383 442 1.9E-28 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RR42_RS04405 7ab6f5e0bbb4c1d75ac524dee883a0c3 856 Gene3D G3DSA:3.30.470.20 201 320 1.9E-28 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RR42_RS04405 7ab6f5e0bbb4c1d75ac524dee883a0c3 856 SMART SM01209 203 361 0.0039 T 23-04-2016 RR42_RS04405 7ab6f5e0bbb4c1d75ac524dee883a0c3 856 Gene3D G3DSA:3.40.1190.10 469 703 4.3E-37 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS13995 4c939025880f68680795be34db06d1a1 200 PANTHER PTHR14269:SF13 2 186 1.7E-67 T 23-04-2016 RR42_RS13995 4c939025880f68680795be34db06d1a1 200 PANTHER PTHR14269 2 186 1.7E-67 T 23-04-2016 RR42_RS13995 4c939025880f68680795be34db06d1a1 200 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 54 76 - T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RR42_RS13995 4c939025880f68680795be34db06d1a1 200 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 186 1.4E-52 T 23-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 RR42_RS13995 4c939025880f68680795be34db06d1a1 200 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 76 1.2E-17 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RR42_RS13995 4c939025880f68680795be34db06d1a1 200 PIRSF PIRSF000847 1 195 7.5E-45 T 23-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 RR42_RS18285 74a4fb0919d0b25de9b15ae61823e042 236 PIRSF PIRSF001461 2 233 1.0E-99 T 23-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RR42_RS18285 74a4fb0919d0b25de9b15ae61823e042 236 PANTHER PTHR11749 5 233 2.7E-123 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RR42_RS18285 74a4fb0919d0b25de9b15ae61823e042 236 Gene3D G3DSA:3.20.20.70 5 229 2.8E-90 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS18285 74a4fb0919d0b25de9b15ae61823e042 236 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 137 159 - T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RR42_RS18285 74a4fb0919d0b25de9b15ae61823e042 236 PANTHER PTHR11749:SF7 5 233 2.7E-123 T 23-04-2016 RR42_RS18285 74a4fb0919d0b25de9b15ae61823e042 236 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 35 49 - T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RR42_RS18285 74a4fb0919d0b25de9b15ae61823e042 236 SUPERFAMILY SSF51366 6 215 2.15E-70 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RR42_RS18285 74a4fb0919d0b25de9b15ae61823e042 236 Pfam PF00834 Ribulose-phosphate 3 epimerase family 8 208 1.9E-89 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RR42_RS18285 74a4fb0919d0b25de9b15ae61823e042 236 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 8 213 2.5E-93 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RR42_RS18320 cfe8562a48429756a739c6c3201cd4f1 267 Gene3D G3DSA:3.40.470.10 34 265 3.3E-88 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RR42_RS18320 cfe8562a48429756a739c6c3201cd4f1 267 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 43 265 37.967 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 RR42_RS18320 cfe8562a48429756a739c6c3201cd4f1 267 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 94 103 - T 23-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 RR42_RS18320 cfe8562a48429756a739c6c3201cd4f1 267 SMART SM00987 86 254 5.0E-35 T 23-04-2016 RR42_RS18320 cfe8562a48429756a739c6c3201cd4f1 267 Pfam PF03167 Uracil DNA glycosylase superfamily 88 254 4.8E-22 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RR42_RS18320 cfe8562a48429756a739c6c3201cd4f1 267 SMART SM00986 86 254 5.0E-35 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RR42_RS18320 cfe8562a48429756a739c6c3201cd4f1 267 SUPERFAMILY SSF52141 42 265 4.49E-78 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RR42_RS18320 cfe8562a48429756a739c6c3201cd4f1 267 PANTHER PTHR11264 46 266 1.3E-110 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 RR42_RS18320 cfe8562a48429756a739c6c3201cd4f1 267 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 45 258 1.4E-73 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 RR42_RS20495 a3330e54bfb8c34848026591a2066ed4 300 PANTHER PTHR30537:SF5 1 292 3.0E-108 T 23-04-2016 RR42_RS20495 a3330e54bfb8c34848026591a2066ed4 300 Gene3D G3DSA:1.10.10.10 3 81 6.6E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS20495 a3330e54bfb8c34848026591a2066ed4 300 SUPERFAMILY SSF53850 89 292 5.43E-44 T 23-04-2016 RR42_RS20495 a3330e54bfb8c34848026591a2066ed4 300 Pfam PF03466 LysR substrate binding domain 87 292 6.7E-45 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS20495 a3330e54bfb8c34848026591a2066ed4 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 4.4E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS20495 a3330e54bfb8c34848026591a2066ed4 300 Gene3D G3DSA:3.40.190.10 178 260 1.0E-21 T 23-04-2016 RR42_RS20495 a3330e54bfb8c34848026591a2066ed4 300 SUPERFAMILY SSF46785 3 112 5.69E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS20495 a3330e54bfb8c34848026591a2066ed4 300 Gene3D G3DSA:3.40.190.10 92 177 4.5E-19 T 23-04-2016 RR42_RS20495 a3330e54bfb8c34848026591a2066ed4 300 PANTHER PTHR30537 1 292 3.0E-108 T 23-04-2016 RR42_RS01780 32734fd5d6335222e3a959a0c54d74be 317 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 119 9.3E-44 T 23-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 RR42_RS01780 32734fd5d6335222e3a959a0c54d74be 317 PANTHER PTHR21621 1 315 1.8E-115 T 23-04-2016 RR42_RS01780 32734fd5d6335222e3a959a0c54d74be 317 Gene3D G3DSA:3.30.470.20 191 298 3.5E-46 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RR42_RS01780 32734fd5d6335222e3a959a0c54d74be 317 SUPERFAMILY SSF56059 123 310 5.41E-57 T 23-04-2016 RR42_RS01780 32734fd5d6335222e3a959a0c54d74be 317 Hamap MF_00162 Glutathione synthetase [gshB]. 1 315 162.345 T 23-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 RR42_RS01780 32734fd5d6335222e3a959a0c54d74be 317 SUPERFAMILY SSF52440 1 121 1.61E-41 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RR42_RS01780 32734fd5d6335222e3a959a0c54d74be 317 Gene3D G3DSA:3.30.1490.20 136 190 1.5E-28 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RR42_RS01780 32734fd5d6335222e3a959a0c54d74be 317 TIGRFAM TIGR01380 glut_syn: glutathione synthase 1 311 1.6E-125 T 23-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 RR42_RS01780 32734fd5d6335222e3a959a0c54d74be 317 Gene3D G3DSA:3.40.50.20 1 128 1.2E-49 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RR42_RS01780 32734fd5d6335222e3a959a0c54d74be 317 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 123 296 7.7E-74 T 23-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 RR42_RS01780 32734fd5d6335222e3a959a0c54d74be 317 PANTHER PTHR21621:SF4 1 315 1.8E-115 T 23-04-2016 RR42_RS17580 8fba0427566c7bf183dadcf029fbf62a 278 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 1 272 24.843 T 23-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 RR42_RS17580 8fba0427566c7bf183dadcf029fbf62a 278 PANTHER PTHR11558 5 274 6.1E-68 T 23-04-2016 RR42_RS17580 8fba0427566c7bf183dadcf029fbf62a 278 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 63 76 - T 23-04-2016 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 RR42_RS17580 8fba0427566c7bf183dadcf029fbf62a 278 SUPERFAMILY SSF53335 6 270 2.79E-60 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS17580 8fba0427566c7bf183dadcf029fbf62a 278 Pfam PF01564 Spermine/spermidine synthase 7 219 8.9E-42 T 23-04-2016 RR42_RS17580 8fba0427566c7bf183dadcf029fbf62a 278 Gene3D G3DSA:2.30.140.10 6 39 4.6E-8 T 23-04-2016 RR42_RS17580 8fba0427566c7bf183dadcf029fbf62a 278 Gene3D G3DSA:3.40.50.150 40 271 1.7E-55 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS13270 b8188390d4906fcda45004a24c158ab5 204 PANTHER PTHR30446:SF0 3 204 4.2E-96 T 23-04-2016 RR42_RS13270 b8188390d4906fcda45004a24c158ab5 204 TIGRFAM TIGR00615 recR: recombination protein RecR 7 202 1.4E-68 T 23-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 RR42_RS13270 b8188390d4906fcda45004a24c158ab5 204 Hamap MF_00017 Recombination protein RecR [recR]. 1 204 97.688 T 23-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 RR42_RS13270 b8188390d4906fcda45004a24c158ab5 204 PANTHER PTHR30446 3 204 4.2E-96 T 23-04-2016 RR42_RS13270 b8188390d4906fcda45004a24c158ab5 204 SMART SM00493 82 171 5.9E-8 T 23-04-2016 IPR006171 Toprim domain RR42_RS13270 b8188390d4906fcda45004a24c158ab5 204 Pfam PF13662 Toprim domain 83 177 4.8E-21 T 23-04-2016 IPR006171 Toprim domain RR42_RS13270 b8188390d4906fcda45004a24c158ab5 204 Pfam PF02132 RecR protein 42 80 4.0E-15 T 23-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger RR42_RS13270 b8188390d4906fcda45004a24c158ab5 204 SUPERFAMILY SSF111304 6 204 7.32E-73 T 23-04-2016 IPR023627 Recombination protein RecR RR42_RS19040 80b8e2c88662f87c63917ec9a07d2583 790 Gene3D G3DSA:2.40.50.140 363 432 1.1E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS19040 80b8e2c88662f87c63917ec9a07d2583 790 SUPERFAMILY SSF56601 227 249 4.86E-126 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS19040 80b8e2c88662f87c63917ec9a07d2583 790 SUPERFAMILY SSF56601 433 745 4.86E-126 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS19040 80b8e2c88662f87c63917ec9a07d2583 790 SUPERFAMILY SSF56601 278 329 4.86E-126 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS19040 80b8e2c88662f87c63917ec9a07d2583 790 Gene3D G3DSA:3.40.710.10 248 329 7.9E-137 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS19040 80b8e2c88662f87c63917ec9a07d2583 790 Gene3D G3DSA:3.40.710.10 433 750 7.9E-137 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS19040 80b8e2c88662f87c63917ec9a07d2583 790 Gene3D G3DSA:1.10.3810.10 73 247 5.9E-75 T 23-04-2016 RR42_RS19040 80b8e2c88662f87c63917ec9a07d2583 790 PANTHER PTHR32282 1 326 2.3E-245 T 23-04-2016 RR42_RS19040 80b8e2c88662f87c63917ec9a07d2583 790 PANTHER PTHR32282 432 737 2.3E-245 T 23-04-2016 RR42_RS19040 80b8e2c88662f87c63917ec9a07d2583 790 Pfam PF17092 Penicillin-binding protein OB-like domain 332 436 2.5E-22 T 23-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 RR42_RS19040 80b8e2c88662f87c63917ec9a07d2583 790 SUPERFAMILY SSF53955 59 267 1.94E-76 T 23-04-2016 IPR023346 Lysozyme-like domain RR42_RS19040 80b8e2c88662f87c63917ec9a07d2583 790 PANTHER PTHR32282:SF5 1 326 2.3E-245 T 23-04-2016 RR42_RS19040 80b8e2c88662f87c63917ec9a07d2583 790 PANTHER PTHR32282:SF5 432 737 2.3E-245 T 23-04-2016 RR42_RS19040 80b8e2c88662f87c63917ec9a07d2583 790 Pfam PF00905 Penicillin binding protein transpeptidase domain 439 701 1.5E-42 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RR42_RS19040 80b8e2c88662f87c63917ec9a07d2583 790 Pfam PF00912 Transglycosylase 73 245 1.2E-64 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 RR42_RS19040 80b8e2c88662f87c63917ec9a07d2583 790 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 82 721 3.9E-193 T 23-04-2016 RR42_RS11960 7b4ac8b5028ae326e3116cd2bd70e40f 359 Gene3D G3DSA:3.40.630.10 7 131 8.0E-25 T 23-04-2016 RR42_RS11960 7b4ac8b5028ae326e3116cd2bd70e40f 359 Gene3D G3DSA:3.40.630.10 327 340 8.0E-25 T 23-04-2016 RR42_RS11960 7b4ac8b5028ae326e3116cd2bd70e40f 359 Gene3D G3DSA:3.40.630.10 200 268 8.0E-25 T 23-04-2016 RR42_RS11960 7b4ac8b5028ae326e3116cd2bd70e40f 359 Gene3D G3DSA:3.40.50.720 156 199 5.8E-4 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS11960 7b4ac8b5028ae326e3116cd2bd70e40f 359 Pfam PF10994 Protein of unknown function (DUF2817) 7 347 1.0E-133 T 23-04-2016 IPR021259 Protein of unknown function DUF2817 RR42_RS11960 7b4ac8b5028ae326e3116cd2bd70e40f 359 SUPERFAMILY SSF53187 186 298 1.42E-20 T 23-04-2016 RR42_RS11960 7b4ac8b5028ae326e3116cd2bd70e40f 359 SUPERFAMILY SSF53187 54 127 1.42E-20 T 23-04-2016 RR42_RS02575 b404a9f00ffc37386d364ce6831b0072 299 Gene3D G3DSA:3.40.190.10 124 230 2.0E-32 T 23-04-2016 RR42_RS02575 b404a9f00ffc37386d364ce6831b0072 299 PANTHER PTHR30085 1 297 3.0E-121 T 23-04-2016 RR42_RS02575 b404a9f00ffc37386d364ce6831b0072 299 SMART SM00062 38 270 4.2E-50 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RR42_RS02575 b404a9f00ffc37386d364ce6831b0072 299 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 268 8.7E-46 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RR42_RS02575 b404a9f00ffc37386d364ce6831b0072 299 PANTHER PTHR30085:SF2 1 297 3.0E-121 T 23-04-2016 RR42_RS02575 b404a9f00ffc37386d364ce6831b0072 299 SUPERFAMILY SSF53850 6 271 1.48E-58 T 23-04-2016 RR42_RS02575 b404a9f00ffc37386d364ce6831b0072 299 Gene3D G3DSA:3.40.190.10 231 272 2.1E-24 T 23-04-2016 RR42_RS02575 b404a9f00ffc37386d364ce6831b0072 299 Gene3D G3DSA:3.40.190.10 35 123 2.1E-24 T 23-04-2016 RR42_RS06160 5980a27626dbbad338508df65e9f1a91 550 SUPERFAMILY SSF52317 292 547 4.01E-85 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RR42_RS06160 5980a27626dbbad338508df65e9f1a91 550 Pfam PF06418 CTP synthase N-terminus 3 270 9.2E-125 T 23-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RR42_RS06160 5980a27626dbbad338508df65e9f1a91 550 Gene3D G3DSA:3.40.50.880 291 546 1.6E-97 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RR42_RS06160 5980a27626dbbad338508df65e9f1a91 550 Hamap MF_01227 CTP synthase [pyrG]. 2 545 51.047 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RR42_RS06160 5980a27626dbbad338508df65e9f1a91 550 Gene3D G3DSA:3.40.50.300 1 287 3.8E-132 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS06160 5980a27626dbbad338508df65e9f1a91 550 PANTHER PTHR11550 1 547 0.0 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RR42_RS06160 5980a27626dbbad338508df65e9f1a91 550 Pfam PF00117 Glutamine amidotransferase class-I 305 539 1.6E-56 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RR42_RS06160 5980a27626dbbad338508df65e9f1a91 550 SUPERFAMILY SSF52540 2 270 1.65E-118 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS06160 5980a27626dbbad338508df65e9f1a91 550 TIGRFAM TIGR00337 PyrG: CTP synthase 1 540 1.6E-238 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RR42_RS19775 e4fe55a1d925543c7c7150214e218072 196 PANTHER PTHR23091:SF187 17 186 9.7E-29 T 23-04-2016 RR42_RS19775 e4fe55a1d925543c7c7150214e218072 196 Gene3D G3DSA:3.40.630.30 17 187 4.2E-39 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS19775 e4fe55a1d925543c7c7150214e218072 196 SUPERFAMILY SSF55729 18 181 2.74E-28 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS19775 e4fe55a1d925543c7c7150214e218072 196 PANTHER PTHR23091 17 186 9.7E-29 T 23-04-2016 RR42_RS19775 e4fe55a1d925543c7c7150214e218072 196 Pfam PF13420 Acetyltransferase (GNAT) domain 18 175 1.2E-20 T 23-04-2016 RR42_RS37590 80bd272dd540a1be2f75d1dc98b03b87 110 Pfam PF00196 Bacterial regulatory proteins, luxR family 29 82 3.7E-19 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS37590 80bd272dd540a1be2f75d1dc98b03b87 110 SMART SM00421 27 84 3.8E-22 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS37590 80bd272dd540a1be2f75d1dc98b03b87 110 SUPERFAMILY SSF46894 19 87 2.72E-21 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS37590 80bd272dd540a1be2f75d1dc98b03b87 110 PANTHER PTHR26402 25 81 1.7E-12 T 23-04-2016 RR42_RS37590 80bd272dd540a1be2f75d1dc98b03b87 110 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 30 44 4.3E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS37590 80bd272dd540a1be2f75d1dc98b03b87 110 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 60 72 4.3E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS37590 80bd272dd540a1be2f75d1dc98b03b87 110 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 44 60 4.3E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS37590 80bd272dd540a1be2f75d1dc98b03b87 110 Gene3D G3DSA:1.10.10.10 29 86 3.2E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS12425 001c0efd5bc2b37fc667910a8244bc5f 326 SUPERFAMILY SSF51569 8 291 9.34E-66 T 23-04-2016 RR42_RS12425 001c0efd5bc2b37fc667910a8244bc5f 326 PANTHER PTHR10277 14 294 9.2E-103 T 23-04-2016 RR42_RS12425 001c0efd5bc2b37fc667910a8244bc5f 326 Gene3D G3DSA:3.20.20.70 11 291 1.1E-61 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS12425 001c0efd5bc2b37fc667910a8244bc5f 326 Pfam PF00682 HMGL-like 14 285 1.2E-40 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RR42_RS12425 001c0efd5bc2b37fc667910a8244bc5f 326 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 19 35 - T 23-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RR42_RS12425 001c0efd5bc2b37fc667910a8244bc5f 326 PANTHER PTHR10277:SF44 14 294 9.2E-103 T 23-04-2016 RR42_RS17535 86c74fe8296d92806d1643fc62719de0 346 Pfam PF06144 DNA polymerase III, delta subunit 24 197 6.3E-22 T 23-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 RR42_RS17535 86c74fe8296d92806d1643fc62719de0 346 SUPERFAMILY SSF52540 11 218 2.97E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17535 86c74fe8296d92806d1643fc62719de0 346 SUPERFAMILY SSF48019 220 345 8.16E-29 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 RR42_RS17535 86c74fe8296d92806d1643fc62719de0 346 Gene3D G3DSA:1.20.272.20 231 345 9.8E-38 T 23-04-2016 RR42_RS17535 86c74fe8296d92806d1643fc62719de0 346 PANTHER PTHR34388 2 346 2.3E-56 T 23-04-2016 RR42_RS17535 86c74fe8296d92806d1643fc62719de0 346 Gene3D G3DSA:1.10.8.60 147 230 7.9E-33 T 23-04-2016 RR42_RS17535 86c74fe8296d92806d1643fc62719de0 346 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 223 322 1.4E-7 T 23-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS17535 86c74fe8296d92806d1643fc62719de0 346 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 20 344 1.7E-82 T 23-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 RR42_RS17535 86c74fe8296d92806d1643fc62719de0 346 Gene3D G3DSA:3.40.50.300 1 142 3.5E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS15120 f7b1cf4c73e41b6b7ccd059ea289db0c 62 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 60 5.4E-17 T 23-04-2016 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 RR42_RS15120 f7b1cf4c73e41b6b7ccd059ea289db0c 62 SUPERFAMILY SSF55331 2 61 2.23E-18 T 23-04-2016 IPR014347 Tautomerase/MIF superfamily RR42_RS15120 f7b1cf4c73e41b6b7ccd059ea289db0c 62 Pfam PF01361 Tautomerase enzyme 5 57 6.8E-13 T 23-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 RR42_RS15120 f7b1cf4c73e41b6b7ccd059ea289db0c 62 Gene3D G3DSA:3.30.429.20 2 61 5.4E-24 T 23-04-2016 RR42_RS19445 09dd09ea4efa18828deb7bc12db7343d 212 PANTHER PTHR30055 12 197 2.2E-18 T 23-04-2016 RR42_RS19445 09dd09ea4efa18828deb7bc12db7343d 212 PANTHER PTHR30055:SF57 12 197 2.2E-18 T 23-04-2016 RR42_RS19445 09dd09ea4efa18828deb7bc12db7343d 212 SUPERFAMILY SSF46689 2 80 6.16E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS19445 09dd09ea4efa18828deb7bc12db7343d 212 Gene3D G3DSA:1.10.357.10 63 197 1.0E-41 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS19445 09dd09ea4efa18828deb7bc12db7343d 212 Gene3D G3DSA:1.10.10.60 4 62 2.6E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS19445 09dd09ea4efa18828deb7bc12db7343d 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 3.4E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS19445 09dd09ea4efa18828deb7bc12db7343d 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 3.4E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS19445 09dd09ea4efa18828deb7bc12db7343d 212 SUPERFAMILY SSF48498 90 197 2.45E-10 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RR42_RS19445 09dd09ea4efa18828deb7bc12db7343d 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 4.8E-12 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS00580 84b228664d214d29561109eee5413a85 347 Pfam PF06723 MreB/Mbl protein 10 340 2.9E-149 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RR42_RS00580 84b228664d214d29561109eee5413a85 347 SUPERFAMILY SSF53067 154 339 2.06E-48 T 23-04-2016 RR42_RS00580 84b228664d214d29561109eee5413a85 347 PANTHER PTHR19375:SF117 9 332 1.5E-177 T 23-04-2016 RR42_RS00580 84b228664d214d29561109eee5413a85 347 Gene3D G3DSA:3.30.420.40 10 164 3.5E-44 T 23-04-2016 RR42_RS00580 84b228664d214d29561109eee5413a85 347 Gene3D G3DSA:3.90.640.10 192 264 9.1E-30 T 23-04-2016 RR42_RS00580 84b228664d214d29561109eee5413a85 347 SUPERFAMILY SSF53067 9 153 1.01E-36 T 23-04-2016 RR42_RS00580 84b228664d214d29561109eee5413a85 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 340 1.2E-155 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RR42_RS00580 84b228664d214d29561109eee5413a85 347 PANTHER PTHR19375 9 332 1.5E-177 T 23-04-2016 RR42_RS00580 84b228664d214d29561109eee5413a85 347 Gene3D G3DSA:3.30.420.40 268 322 3.1E-33 T 23-04-2016 RR42_RS00580 84b228664d214d29561109eee5413a85 347 Gene3D G3DSA:3.30.420.40 165 191 3.1E-33 T 23-04-2016 RR42_RS00580 84b228664d214d29561109eee5413a85 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 8.1E-63 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RR42_RS00580 84b228664d214d29561109eee5413a85 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 8.1E-63 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RR42_RS00580 84b228664d214d29561109eee5413a85 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 8.1E-63 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RR42_RS00580 84b228664d214d29561109eee5413a85 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 8.1E-63 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RR42_RS00580 84b228664d214d29561109eee5413a85 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 8.1E-63 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RR42_RS06200 3bbe6a4cb8fdbf14fb745a45ca58b70b 274 Pfam PF04305 Protein of unknown function (DUF455) 12 258 1.1E-95 T 23-04-2016 IPR007402 Protein of unknown function DUF455 RR42_RS06200 3bbe6a4cb8fdbf14fb745a45ca58b70b 274 SUPERFAMILY SSF47240 75 217 1.68E-16 T 23-04-2016 IPR009078 Ferritin-like superfamily RR42_RS06200 3bbe6a4cb8fdbf14fb745a45ca58b70b 274 PIRSF PIRSF012318 1 272 4.0E-98 T 23-04-2016 IPR011197 Uncharacterised conserved protein UCP012318 RR42_RS06200 3bbe6a4cb8fdbf14fb745a45ca58b70b 274 PANTHER PTHR21496:SF10 40 270 2.4E-79 T 23-04-2016 RR42_RS06200 3bbe6a4cb8fdbf14fb745a45ca58b70b 274 PANTHER PTHR21496 40 270 2.4E-79 T 23-04-2016 RR42_RS11650 3a0c641419d2b70db86689dae6db2c68 595 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 105 277 4.6E-48 T 23-04-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- RR42_RS11650 3a0c641419d2b70db86689dae6db2c68 595 PANTHER PTHR36837 103 595 4.1E-174 T 23-04-2016 RR42_RS11650 3a0c641419d2b70db86689dae6db2c68 595 SUPERFAMILY SSF53474 234 520 1.06E-38 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS11650 3a0c641419d2b70db86689dae6db2c68 595 PANTHER PTHR36837:SF2 103 595 4.1E-174 T 23-04-2016 RR42_RS11650 3a0c641419d2b70db86689dae6db2c68 595 Gene3D G3DSA:3.40.50.1820 215 569 4.7E-28 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS11650 3a0c641419d2b70db86689dae6db2c68 595 Pfam PF12551 Poly-beta-hydroxybutyrate polymerase N terminal 27 67 9.8E-14 T 23-04-2016 IPR022211 Poly-beta-hydroxybutyrate polymerase N-terminal RR42_RS17600 9b1205b2ac8f7f609ec5fd222cd96f75 199 SUPERFAMILY SSF52038 100 192 8.5E-24 T 23-04-2016 IPR000468 Barstar (barnase inhibitor) RR42_RS17600 9b1205b2ac8f7f609ec5fd222cd96f75 199 Pfam PF01337 Barstar (barnase inhibitor) 104 188 1.9E-26 T 23-04-2016 IPR000468 Barstar (barnase inhibitor) RR42_RS17600 9b1205b2ac8f7f609ec5fd222cd96f75 199 Gene3D G3DSA:3.30.370.10 99 192 3.7E-31 T 23-04-2016 IPR000468 Barstar (barnase inhibitor) RR42_RS14135 865f3674a587121b20f1242adada1572 243 Gene3D G3DSA:3.30.950.10 128 240 2.9E-24 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 RR42_RS14135 865f3674a587121b20f1242adada1572 243 PANTHER PTHR21091 63 185 3.2E-23 T 23-04-2016 RR42_RS14135 865f3674a587121b20f1242adada1572 243 PANTHER PTHR21091:SF118 63 185 3.2E-23 T 23-04-2016 RR42_RS14135 865f3674a587121b20f1242adada1572 243 SUPERFAMILY SSF53790 3 238 1.15E-58 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RR42_RS14135 865f3674a587121b20f1242adada1572 243 PIRSF PIRSF005917 1 239 1.1E-50 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RR42_RS00735 89712afd9d55a00063c280b664bb7643 327 PANTHER PTHR11820:SF85 8 323 1.4E-132 T 23-04-2016 RR42_RS00735 89712afd9d55a00063c280b664bb7643 327 Gene3D G3DSA:3.90.850.10 68 307 4.0E-42 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RR42_RS00735 89712afd9d55a00063c280b664bb7643 327 SUPERFAMILY SSF56529 77 323 1.96E-60 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RR42_RS00735 89712afd9d55a00063c280b664bb7643 327 PANTHER PTHR11820 8 323 1.4E-132 T 23-04-2016 RR42_RS00735 89712afd9d55a00063c280b664bb7643 327 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 320 1.7E-39 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RR42_RS19160 5d26e151384c832500bf5a8903899b3e 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.774 T 23-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 RR42_RS19160 5d26e151384c832500bf5a8903899b3e 144 PANTHER PTHR12934 1 142 6.0E-64 T 23-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 RR42_RS19160 5d26e151384c832500bf5a8903899b3e 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 142 4.8E-31 T 23-04-2016 IPR021131 Ribosomal protein L18e/L15P RR42_RS19160 5d26e151384c832500bf5a8903899b3e 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 142 3.1E-48 T 23-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 RR42_RS19160 5d26e151384c832500bf5a8903899b3e 144 Gene3D G3DSA:3.100.10.10 32 142 1.1E-26 T 23-04-2016 RR42_RS19160 5d26e151384c832500bf5a8903899b3e 144 SUPERFAMILY SSF52080 4 142 1.57E-46 T 23-04-2016 IPR021131 Ribosomal protein L18e/L15P RR42_RS09080 71044e6b337b4e6c680f80dbe8a5edde 436 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 427 5.3E-103 T 23-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 RR42_RS09080 71044e6b337b4e6c680f80dbe8a5edde 436 PANTHER PTHR33362 8 431 3.8E-119 T 23-04-2016 RR42_RS09080 71044e6b337b4e6c680f80dbe8a5edde 436 PANTHER PTHR33362:SF5 8 431 3.8E-119 T 23-04-2016 RR42_RS09080 71044e6b337b4e6c680f80dbe8a5edde 436 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 422 2.5E-78 T 23-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RR42_RS09080 71044e6b337b4e6c680f80dbe8a5edde 436 PIRSF PIRSF006066 5 433 8.1E-85 T 23-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 RR42_RS09800 a0fe5c7af095cef56b2d522e364e58cb 480 PANTHER PTHR30203 16 476 8.5E-72 T 23-04-2016 RR42_RS09800 a0fe5c7af095cef56b2d522e364e58cb 480 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 475 9.1E-119 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RR42_RS09800 a0fe5c7af095cef56b2d522e364e58cb 480 SUPERFAMILY SSF56954 65 477 1.31E-93 T 23-04-2016 RR42_RS09800 a0fe5c7af095cef56b2d522e364e58cb 480 SUPERFAMILY SSF56954 6 30 1.31E-93 T 23-04-2016 RR42_RS09800 a0fe5c7af095cef56b2d522e364e58cb 480 PANTHER PTHR30203:SF9 16 476 8.5E-72 T 23-04-2016 RR42_RS09800 a0fe5c7af095cef56b2d522e364e58cb 480 Pfam PF02321 Outer membrane efflux protein 296 473 2.2E-24 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RR42_RS09800 a0fe5c7af095cef56b2d522e364e58cb 480 Pfam PF02321 Outer membrane efflux protein 74 256 4.2E-16 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RR42_RS09800 a0fe5c7af095cef56b2d522e364e58cb 480 Gene3D G3DSA:1.20.1600.10 61 478 8.8E-94 T 23-04-2016 RR42_RS13780 ceaeb0f8c0b907ca165ae9344d9afb47 297 SUPERFAMILY SSF161098 53 278 3.66E-44 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS13780 ceaeb0f8c0b907ca165ae9344d9afb47 297 PANTHER PTHR30193 8 294 2.1E-71 T 23-04-2016 RR42_RS13780 ceaeb0f8c0b907ca165ae9344d9afb47 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 280 1.0E-15 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS13780 ceaeb0f8c0b907ca165ae9344d9afb47 297 Gene3D G3DSA:1.10.3720.10 58 285 3.5E-42 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS13780 ceaeb0f8c0b907ca165ae9344d9afb47 297 PANTHER PTHR30193:SF6 8 294 2.1E-71 T 23-04-2016 RR42_RS14725 c14cebc689e1aeac99658d370eb4f6bc 419 PANTHER PTHR23150 226 415 6.7E-26 T 23-04-2016 RR42_RS14725 c14cebc689e1aeac99658d370eb4f6bc 419 Gene3D G3DSA:3.90.1580.10 348 417 1.1E-6 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme RR42_RS14725 c14cebc689e1aeac99658d370eb4f6bc 419 Gene3D G3DSA:3.90.1580.10 202 339 6.2E-33 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme RR42_RS14725 c14cebc689e1aeac99658d370eb4f6bc 419 Pfam PF12867 DinB superfamily 33 160 8.9E-7 T 23-04-2016 IPR024775 DinB-like domain RR42_RS14725 c14cebc689e1aeac99658d370eb4f6bc 419 Pfam PF03781 Sulfatase-modifying factor enzyme 1 202 342 1.1E-21 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme RR42_RS14725 c14cebc689e1aeac99658d370eb4f6bc 419 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 30 417 8.2E-100 T 23-04-2016 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255|UniPathway: UPA01014 RR42_RS14725 c14cebc689e1aeac99658d370eb4f6bc 419 SUPERFAMILY SSF56436 203 417 1.73E-45 T 23-04-2016 IPR016187 C-type lectin fold RR42_RS14725 c14cebc689e1aeac99658d370eb4f6bc 419 PANTHER PTHR23150:SF24 226 415 6.7E-26 T 23-04-2016 RR42_RS11565 974a16edec416dab772cc853638a17d9 822 SUPERFAMILY SSF55073 410 568 5.1E-50 T 23-04-2016 IPR029787 Nucleotide cyclase RR42_RS11565 974a16edec416dab772cc853638a17d9 822 Gene3D G3DSA:3.20.20.450 582 821 7.0E-97 T 23-04-2016 IPR001633 EAL domain RR42_RS11565 974a16edec416dab772cc853638a17d9 822 Gene3D G3DSA:3.10.580.10 138 253 1.0E-16 T 23-04-2016 RR42_RS11565 974a16edec416dab772cc853638a17d9 822 Gene3D G3DSA:3.10.580.10 10 123 1.4E-21 T 23-04-2016 RR42_RS11565 974a16edec416dab772cc853638a17d9 822 SUPERFAMILY SSF55785 285 392 3.14E-28 T 23-04-2016 IPR000014 PAS domain RR42_RS11565 974a16edec416dab772cc853638a17d9 822 Pfam PF13426 PAS domain 291 393 3.8E-15 T 23-04-2016 IPR000014 PAS domain RR42_RS11565 974a16edec416dab772cc853638a17d9 822 SMART SM00267 394 566 2.0E-68 T 23-04-2016 IPR000160 GGDEF domain RR42_RS11565 974a16edec416dab772cc853638a17d9 822 SMART SM00052 576 822 8.3E-113 T 23-04-2016 IPR001633 EAL domain RR42_RS11565 974a16edec416dab772cc853638a17d9 822 SMART SM00086 352 394 6.6E-6 T 23-04-2016 IPR001610 PAC motif RR42_RS11565 974a16edec416dab772cc853638a17d9 822 SMART SM00116 17 64 1.5 T 23-04-2016 IPR000644 CBS domain RR42_RS11565 974a16edec416dab772cc853638a17d9 822 SMART SM00116 80 127 4.6E-4 T 23-04-2016 IPR000644 CBS domain RR42_RS11565 974a16edec416dab772cc853638a17d9 822 SMART SM00116 144 191 0.49 T 23-04-2016 IPR000644 CBS domain RR42_RS11565 974a16edec416dab772cc853638a17d9 822 SMART SM00116 206 254 9.9 T 23-04-2016 IPR000644 CBS domain RR42_RS11565 974a16edec416dab772cc853638a17d9 822 Gene3D G3DSA:3.30.70.270 406 574 1.9E-57 T 23-04-2016 RR42_RS11565 974a16edec416dab772cc853638a17d9 822 Pfam PF00563 EAL domain 583 817 1.5E-71 T 23-04-2016 IPR001633 EAL domain RR42_RS11565 974a16edec416dab772cc853638a17d9 822 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 285 401 6.3E-21 T 23-04-2016 IPR000014 PAS domain RR42_RS11565 974a16edec416dab772cc853638a17d9 822 PANTHER PTHR10799:SF774 293 676 2.3E-85 T 23-04-2016 RR42_RS11565 974a16edec416dab772cc853638a17d9 822 Pfam PF00990 Diguanylate cyclase, GGDEF domain 405 561 9.1E-48 T 23-04-2016 IPR000160 GGDEF domain RR42_RS11565 974a16edec416dab772cc853638a17d9 822 SUPERFAMILY SSF54631 136 261 6.49E-19 T 23-04-2016 RR42_RS11565 974a16edec416dab772cc853638a17d9 822 SMART SM00091 280 346 4.3E-5 T 23-04-2016 IPR000014 PAS domain RR42_RS11565 974a16edec416dab772cc853638a17d9 822 Gene3D G3DSA:3.30.450.20 291 393 4.0E-27 T 23-04-2016 RR42_RS11565 974a16edec416dab772cc853638a17d9 822 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 404 564 1.8E-41 T 23-04-2016 IPR000160 GGDEF domain RR42_RS11565 974a16edec416dab772cc853638a17d9 822 PANTHER PTHR10799 293 676 2.3E-85 T 23-04-2016 RR42_RS11565 974a16edec416dab772cc853638a17d9 822 SUPERFAMILY SSF54631 10 123 1.26E-19 T 23-04-2016 RR42_RS11565 974a16edec416dab772cc853638a17d9 822 Pfam PF00571 CBS domain 73 123 1.3E-7 T 23-04-2016 IPR000644 CBS domain RR42_RS11565 974a16edec416dab772cc853638a17d9 822 Pfam PF00571 CBS domain 13 62 0.0051 T 23-04-2016 IPR000644 CBS domain RR42_RS11565 974a16edec416dab772cc853638a17d9 822 Pfam PF00571 CBS domain 143 190 4.6E-4 T 23-04-2016 IPR000644 CBS domain RR42_RS11565 974a16edec416dab772cc853638a17d9 822 SUPERFAMILY SSF141868 582 821 5.1E-88 T 23-04-2016 IPR001633 EAL domain RR42_RS25770 b6740ac245072ce917ec9c84868f9d9d 126 PANTHER PTHR11785 2 126 5.8E-78 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RR42_RS25770 b6740ac245072ce917ec9c84868f9d9d 126 Pfam PF00324 Amino acid permease 15 126 1.4E-23 T 23-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RR42_RS25770 b6740ac245072ce917ec9c84868f9d9d 126 PANTHER PTHR11785:SF317 2 126 5.8E-78 T 23-04-2016 RR42_RS25770 b6740ac245072ce917ec9c84868f9d9d 126 ProSitePatterns PS00218 Amino acid permeases signature. 39 69 - T 23-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RR42_RS00270 efe26659459cbd5ff555a15580ba7867 265 SUPERFAMILY SSF53850 8 256 1.94E-56 T 23-04-2016 RR42_RS00270 efe26659459cbd5ff555a15580ba7867 265 Gene3D G3DSA:3.40.190.10 142 209 5.3E-12 T 23-04-2016 RR42_RS00270 efe26659459cbd5ff555a15580ba7867 265 SMART SM00062 36 258 1.5E-39 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RR42_RS00270 efe26659459cbd5ff555a15580ba7867 265 PANTHER PTHR18966:SF191 23 256 1.1E-36 T 23-04-2016 RR42_RS00270 efe26659459cbd5ff555a15580ba7867 265 Gene3D G3DSA:3.40.190.10 17 141 1.8E-37 T 23-04-2016 RR42_RS00270 efe26659459cbd5ff555a15580ba7867 265 PANTHER PTHR18966 23 256 1.1E-36 T 23-04-2016 RR42_RS00270 efe26659459cbd5ff555a15580ba7867 265 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 256 2.0E-48 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RR42_RS03280 f7910acde0874e1ccab182e32ecee632 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.5E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS03280 f7910acde0874e1ccab182e32ecee632 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.5E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS03280 f7910acde0874e1ccab182e32ecee632 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.5E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS03280 f7910acde0874e1ccab182e32ecee632 301 SUPERFAMILY SSF46785 4 89 4.28E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS03280 f7910acde0874e1ccab182e32ecee632 301 Gene3D G3DSA:1.10.10.10 2 80 5.0E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS03280 f7910acde0874e1ccab182e32ecee632 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 8.1E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS03280 f7910acde0874e1ccab182e32ecee632 301 PANTHER PTHR30126:SF29 3 288 5.2E-69 T 23-04-2016 RR42_RS03280 f7910acde0874e1ccab182e32ecee632 301 PANTHER PTHR30126 3 288 5.2E-69 T 23-04-2016 RR42_RS03280 f7910acde0874e1ccab182e32ecee632 301 Pfam PF03466 LysR substrate binding domain 89 287 9.2E-24 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS03280 f7910acde0874e1ccab182e32ecee632 301 SUPERFAMILY SSF53850 90 290 1.56E-28 T 23-04-2016 RR42_RS03280 f7910acde0874e1ccab182e32ecee632 301 Gene3D G3DSA:3.40.190.10 108 181 3.7E-10 T 23-04-2016 RR42_RS03280 f7910acde0874e1ccab182e32ecee632 301 Gene3D G3DSA:3.40.190.10 182 245 3.6E-5 T 23-04-2016 RR42_RS12525 9fad4c68d056045a11de5bade5601c57 85 SUPERFAMILY SSF54285 1 83 1.18E-20 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RR42_RS12525 9fad4c68d056045a11de5bade5601c57 85 Pfam PF02597 ThiS family 6 85 1.2E-18 T 23-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 RR42_RS12525 9fad4c68d056045a11de5bade5601c57 85 Gene3D G3DSA:3.10.20.30 1 85 4.0E-24 T 23-04-2016 IPR012675 Beta-grasp domain RR42_RS12525 9fad4c68d056045a11de5bade5601c57 85 PANTHER PTHR33359 1 85 9.6E-20 T 23-04-2016 RR42_RS12525 9fad4c68d056045a11de5bade5601c57 85 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 3 85 6.4E-25 T 23-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 RR42_RS14065 ff0ff7622ae8b48ddab67377e2509ca3 496 SUPERFAMILY SSF50156 242 366 1.25E-23 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS14065 ff0ff7622ae8b48ddab67377e2509ca3 496 Pfam PF13365 Trypsin-like peptidase domain 114 245 4.2E-35 T 23-04-2016 RR42_RS14065 ff0ff7622ae8b48ddab67377e2509ca3 496 SMART SM00228 403 480 0.21 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS14065 ff0ff7622ae8b48ddab67377e2509ca3 496 SMART SM00228 284 366 2.8E-11 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS14065 ff0ff7622ae8b48ddab67377e2509ca3 496 Gene3D G3DSA:2.30.42.10 405 494 2.2E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS14065 ff0ff7622ae8b48ddab67377e2509ca3 496 Gene3D G3DSA:2.30.42.10 286 380 3.5E-28 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS14065 ff0ff7622ae8b48ddab67377e2509ca3 496 PANTHER PTHR22939 38 62 3.2E-131 T 23-04-2016 RR42_RS14065 ff0ff7622ae8b48ddab67377e2509ca3 496 PANTHER PTHR22939 96 379 3.2E-131 T 23-04-2016 RR42_RS14065 ff0ff7622ae8b48ddab67377e2509ca3 496 PRINTS PR00834 HtrA/DegQ protease family signature 184 208 4.9E-53 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS14065 ff0ff7622ae8b48ddab67377e2509ca3 496 PRINTS PR00834 HtrA/DegQ protease family signature 144 164 4.9E-53 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS14065 ff0ff7622ae8b48ddab67377e2509ca3 496 PRINTS PR00834 HtrA/DegQ protease family signature 216 233 4.9E-53 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS14065 ff0ff7622ae8b48ddab67377e2509ca3 496 PRINTS PR00834 HtrA/DegQ protease family signature 123 135 4.9E-53 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS14065 ff0ff7622ae8b48ddab67377e2509ca3 496 PRINTS PR00834 HtrA/DegQ protease family signature 324 336 4.9E-53 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS14065 ff0ff7622ae8b48ddab67377e2509ca3 496 PRINTS PR00834 HtrA/DegQ protease family signature 238 255 4.9E-53 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS14065 ff0ff7622ae8b48ddab67377e2509ca3 496 Gene3D G3DSA:2.40.10.10 40 175 1.8E-39 T 23-04-2016 RR42_RS14065 ff0ff7622ae8b48ddab67377e2509ca3 496 Pfam PF13180 PDZ domain 295 375 1.6E-16 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS14065 ff0ff7622ae8b48ddab67377e2509ca3 496 SUPERFAMILY SSF50156 405 491 5.13E-11 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS14065 ff0ff7622ae8b48ddab67377e2509ca3 496 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 40 487 8.9E-156 T 23-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 RR42_RS14065 ff0ff7622ae8b48ddab67377e2509ca3 496 SUPERFAMILY SSF50494 39 275 3.92E-68 T 23-04-2016 IPR009003 Peptidase S1, PA clan RR42_RS14065 ff0ff7622ae8b48ddab67377e2509ca3 496 PANTHER PTHR22939:SF98 38 62 3.2E-131 T 23-04-2016 RR42_RS14065 ff0ff7622ae8b48ddab67377e2509ca3 496 PANTHER PTHR22939:SF98 96 379 3.2E-131 T 23-04-2016 RR42_RS14065 ff0ff7622ae8b48ddab67377e2509ca3 496 Gene3D G3DSA:2.40.10.10 176 285 1.2E-44 T 23-04-2016 RR42_RS04635 e584cbbcd808e8bf49f7d190ee65cece 135 PIRSF PIRSF002191 1 135 2.9E-52 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS04635 e584cbbcd808e8bf49f7d190ee65cece 135 PRINTS PR00061 Ribosomal protein L19 signature 38 67 2.3E-34 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS04635 e584cbbcd808e8bf49f7d190ee65cece 135 PRINTS PR00061 Ribosomal protein L19 signature 8 37 2.3E-34 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS04635 e584cbbcd808e8bf49f7d190ee65cece 135 PRINTS PR00061 Ribosomal protein L19 signature 92 117 2.3E-34 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS04635 e584cbbcd808e8bf49f7d190ee65cece 135 Pfam PF01245 Ribosomal protein L19 4 117 1.7E-46 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS04635 e584cbbcd808e8bf49f7d190ee65cece 135 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 117 1.4E-47 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS04635 e584cbbcd808e8bf49f7d190ee65cece 135 SUPERFAMILY SSF50104 2 119 1.6E-44 T 23-04-2016 IPR008991 Translation protein SH3-like domain RR42_RS04635 e584cbbcd808e8bf49f7d190ee65cece 135 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 118 30.171 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS04635 e584cbbcd808e8bf49f7d190ee65cece 135 PANTHER PTHR15680 2 127 1.1E-54 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS04635 e584cbbcd808e8bf49f7d190ee65cece 135 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 23-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS14920 d9ed09322d015714af43179f702b6bf2 591 SUPERFAMILY SSF56935 207 308 2.56E-6 T 23-04-2016 RR42_RS14920 d9ed09322d015714af43179f702b6bf2 591 SUPERFAMILY SSF56935 335 380 2.56E-6 T 23-04-2016 RR42_RS14920 d9ed09322d015714af43179f702b6bf2 591 SUPERFAMILY SSF56935 452 568 2.56E-6 T 23-04-2016 RR42_RS14920 d9ed09322d015714af43179f702b6bf2 591 Pfam PF16930 Putative porin 49 591 1.9E-211 T 23-04-2016 IPR032638 Putative bacterial porin RR42_RS05455 043936a3447c9a153f2c2fb2d0a815ee 300 Pfam PF01066 CDP-alcohol phosphatidyltransferase 58 121 5.4E-13 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RR42_RS05455 043936a3447c9a153f2c2fb2d0a815ee 300 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 99 121 - T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RR42_RS05455 043936a3447c9a153f2c2fb2d0a815ee 300 PANTHER PTHR15362 49 191 1.3E-32 T 23-04-2016 RR42_RS05455 043936a3447c9a153f2c2fb2d0a815ee 300 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 65 197 1.5E-33 T 23-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 RR42_RS18580 15159ec9b1ee6d0193e9564fdee55d01 251 Gene3D G3DSA:1.10.10.10 7 78 3.2E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS18580 15159ec9b1ee6d0193e9564fdee55d01 251 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 74 1.6E-20 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS18580 15159ec9b1ee6d0193e9564fdee55d01 251 PANTHER PTHR11751 3 111 2.9E-31 T 23-04-2016 RR42_RS18580 15159ec9b1ee6d0193e9564fdee55d01 251 Gene3D G3DSA:1.20.120.530 91 232 2.7E-27 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS18580 15159ec9b1ee6d0193e9564fdee55d01 251 SMART SM00895 95 221 2.2E-19 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS18580 15159ec9b1ee6d0193e9564fdee55d01 251 SUPERFAMILY SSF48008 92 228 1.57E-26 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS18580 15159ec9b1ee6d0193e9564fdee55d01 251 Pfam PF07729 FCD domain 95 220 8.8E-24 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS18580 15159ec9b1ee6d0193e9564fdee55d01 251 SMART SM00345 15 74 1.1E-21 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS18580 15159ec9b1ee6d0193e9564fdee55d01 251 PANTHER PTHR11751:SF277 3 111 2.9E-31 T 23-04-2016 RR42_RS18580 15159ec9b1ee6d0193e9564fdee55d01 251 SUPERFAMILY SSF46785 6 78 1.7E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS18580 15159ec9b1ee6d0193e9564fdee55d01 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.36E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS18580 15159ec9b1ee6d0193e9564fdee55d01 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.36E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS02835 ccc0af9a27c222b3030d3fa3ddf5755d 535 Gene3D G3DSA:3.60.110.10 248 500 3.1E-21 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RR42_RS02835 ccc0af9a27c222b3030d3fa3ddf5755d 535 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 77 482 1.5E-101 T 23-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 RR42_RS02835 ccc0af9a27c222b3030d3fa3ddf5755d 535 Pfam PF00795 Carbon-nitrogen hydrolase 274 500 3.9E-23 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RR42_RS02835 ccc0af9a27c222b3030d3fa3ddf5755d 535 SUPERFAMILY SSF56317 250 514 2.62E-35 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RR42_RS02835 ccc0af9a27c222b3030d3fa3ddf5755d 535 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 23 520 22.614 T 23-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 RR42_RS02835 ccc0af9a27c222b3030d3fa3ddf5755d 535 PANTHER PTHR38686 15 529 1.5E-84 T 23-04-2016 RR42_RS15230 178bae41a06588009bb520d2cf37b8fe 127 SUPERFAMILY SSF161084 3 120 6.67E-27 T 23-04-2016 RR42_RS15230 178bae41a06588009bb520d2cf37b8fe 127 PANTHER PTHR35371 1 121 2.3E-28 T 23-04-2016 RR42_RS15230 178bae41a06588009bb520d2cf37b8fe 127 PANTHER PTHR35371:SF1 1 121 2.3E-28 T 23-04-2016 RR42_RS15230 178bae41a06588009bb520d2cf37b8fe 127 Pfam PF01124 MAPEG family 3 123 4.2E-26 T 23-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein RR42_RS15230 178bae41a06588009bb520d2cf37b8fe 127 Gene3D G3DSA:1.20.120.550 4 123 1.7E-21 T 23-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain RR42_RS14690 48f63d9c5459fd74f3ecb9dd9e5d3139 308 Gene3D G3DSA:3.40.190.10 240 280 1.8E-28 T 23-04-2016 RR42_RS14690 48f63d9c5459fd74f3ecb9dd9e5d3139 308 Gene3D G3DSA:3.40.190.10 45 131 1.8E-28 T 23-04-2016 RR42_RS14690 48f63d9c5459fd74f3ecb9dd9e5d3139 308 SUPERFAMILY SSF53850 18 280 5.62E-62 T 23-04-2016 RR42_RS14690 48f63d9c5459fd74f3ecb9dd9e5d3139 308 SMART SM00062 48 279 3.8E-54 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RR42_RS14690 48f63d9c5459fd74f3ecb9dd9e5d3139 308 PANTHER PTHR30085 4 304 9.4E-98 T 23-04-2016 RR42_RS14690 48f63d9c5459fd74f3ecb9dd9e5d3139 308 SMART SM00079 48 278 0.001 T 23-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 RR42_RS14690 48f63d9c5459fd74f3ecb9dd9e5d3139 308 Gene3D G3DSA:3.40.190.10 132 239 1.9E-25 T 23-04-2016 RR42_RS14690 48f63d9c5459fd74f3ecb9dd9e5d3139 308 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 49 277 1.3E-47 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RR42_RS14690 48f63d9c5459fd74f3ecb9dd9e5d3139 308 PANTHER PTHR30085:SF2 4 304 9.4E-98 T 23-04-2016 RR42_RS10585 ac7335260bd284d7f9c3827debd70aa9 201 PANTHER PTHR30328:SF18 1 187 6.0E-32 T 23-04-2016 RR42_RS10585 ac7335260bd284d7f9c3827debd70aa9 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 1.7E-12 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS10585 ac7335260bd284d7f9c3827debd70aa9 201 SUPERFAMILY SSF48498 90 196 5.02E-24 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RR42_RS10585 ac7335260bd284d7f9c3827debd70aa9 201 PANTHER PTHR30328 1 187 6.0E-32 T 23-04-2016 RR42_RS10585 ac7335260bd284d7f9c3827debd70aa9 201 Gene3D G3DSA:1.10.357.10 68 196 3.1E-35 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS10585 ac7335260bd284d7f9c3827debd70aa9 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 2.3E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS10585 ac7335260bd284d7f9c3827debd70aa9 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 2.3E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS10585 ac7335260bd284d7f9c3827debd70aa9 201 Gene3D G3DSA:1.10.10.60 13 67 8.7E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS10585 ac7335260bd284d7f9c3827debd70aa9 201 SUPERFAMILY SSF46689 12 76 9.75E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS07500 9d6e88ea8e4f797c7c72a3504c66aa12 411 PANTHER PTHR19384 154 411 4.6E-69 T 23-04-2016 RR42_RS07500 9d6e88ea8e4f797c7c72a3504c66aa12 411 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 236 245 5.6E-16 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS07500 9d6e88ea8e4f797c7c72a3504c66aa12 411 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 365 373 5.6E-16 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS07500 9d6e88ea8e4f797c7c72a3504c66aa12 411 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 177 187 5.6E-16 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS07500 9d6e88ea8e4f797c7c72a3504c66aa12 411 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 200 207 5.6E-16 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS07500 9d6e88ea8e4f797c7c72a3504c66aa12 411 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 299 308 5.6E-16 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS07500 9d6e88ea8e4f797c7c72a3504c66aa12 411 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 272 291 5.6E-16 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS07500 9d6e88ea8e4f797c7c72a3504c66aa12 411 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 341 357 5.6E-16 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS07500 9d6e88ea8e4f797c7c72a3504c66aa12 411 PIRSF PIRSF501177 2 411 1.5E-211 T 23-04-2016 IPR017634 Benzoyl-CoA oxygenase/reductase, BoxA protein KEGG: 00361+1.14.13.20|MetaCyc: PWY-6085|MetaCyc: PWY-6086 RR42_RS07500 9d6e88ea8e4f797c7c72a3504c66aa12 411 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 46 57 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RR42_RS07500 9d6e88ea8e4f797c7c72a3504c66aa12 411 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 17 28 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RR42_RS07500 9d6e88ea8e4f797c7c72a3504c66aa12 411 Pfam PF13187 4Fe-4S dicluster domain 17 61 5.2E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RR42_RS07500 9d6e88ea8e4f797c7c72a3504c66aa12 411 PIRSF PIRSF000361 69 411 6.5E-70 T 23-04-2016 IPR015701 Ferredoxin--NADP reductase GO:0016491|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 RR42_RS07500 9d6e88ea8e4f797c7c72a3504c66aa12 411 PANTHER PTHR19384:SF69 154 411 4.6E-69 T 23-04-2016 RR42_RS07500 9d6e88ea8e4f797c7c72a3504c66aa12 411 Gene3D G3DSA:2.40.30.10 126 257 9.3E-40 T 23-04-2016 RR42_RS07500 9d6e88ea8e4f797c7c72a3504c66aa12 411 SUPERFAMILY SSF52343 261 411 4.19E-33 T 23-04-2016 RR42_RS07500 9d6e88ea8e4f797c7c72a3504c66aa12 411 TIGRFAM TIGR03224 benzo_boxA: benzoyl-CoA oxygenase/reductase, BoxA protein 6 411 2.0E-221 T 23-04-2016 IPR017634 Benzoyl-CoA oxygenase/reductase, BoxA protein KEGG: 00361+1.14.13.20|MetaCyc: PWY-6085|MetaCyc: PWY-6086 RR42_RS07500 9d6e88ea8e4f797c7c72a3504c66aa12 411 Pfam PF00175 Oxidoreductase NAD-binding domain 273 378 4.9E-14 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RR42_RS07500 9d6e88ea8e4f797c7c72a3504c66aa12 411 SUPERFAMILY SSF54862 11 66 1.59E-19 T 23-04-2016 RR42_RS07500 9d6e88ea8e4f797c7c72a3504c66aa12 411 SUPERFAMILY SSF63380 127 265 8.8E-37 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RR42_RS07500 9d6e88ea8e4f797c7c72a3504c66aa12 411 Gene3D G3DSA:3.30.70.20 11 64 8.4E-17 T 23-04-2016 RR42_RS07500 9d6e88ea8e4f797c7c72a3504c66aa12 411 Gene3D G3DSA:3.40.50.80 260 409 1.3E-31 T 23-04-2016 RR42_RS19810 619a4a2bf63f154e6864629345668c36 568 Gene3D G3DSA:3.40.50.980 203 354 9.8E-33 T 23-04-2016 RR42_RS19810 619a4a2bf63f154e6864629345668c36 568 Pfam PF00501 AMP-binding enzyme 19 455 3.5E-83 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS19810 619a4a2bf63f154e6864629345668c36 568 Gene3D G3DSA:2.30.38.10 375 449 2.6E-17 T 23-04-2016 RR42_RS19810 619a4a2bf63f154e6864629345668c36 568 Gene3D G3DSA:3.30.300.30 450 548 2.9E-28 T 23-04-2016 RR42_RS19810 619a4a2bf63f154e6864629345668c36 568 Pfam PF13193 AMP-binding enzyme C-terminal domain 465 539 6.5E-19 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RR42_RS19810 619a4a2bf63f154e6864629345668c36 568 PANTHER PTHR24096 1 552 6.7E-246 T 23-04-2016 RR42_RS19810 619a4a2bf63f154e6864629345668c36 568 SUPERFAMILY SSF56801 5 552 1.44E-130 T 23-04-2016 RR42_RS19810 619a4a2bf63f154e6864629345668c36 568 Gene3D G3DSA:3.40.50.980 12 202 9.0E-26 T 23-04-2016 RR42_RS19810 619a4a2bf63f154e6864629345668c36 568 ProSitePatterns PS00455 Putative AMP-binding domain signature. 195 206 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS19810 619a4a2bf63f154e6864629345668c36 568 PANTHER PTHR24096:SF53 1 552 6.7E-246 T 23-04-2016 RR42_RS02800 9df6ecbcc328182053eb20ede795f59a 135 SUPERFAMILY SSF54593 1 127 1.01E-34 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS02800 9df6ecbcc328182053eb20ede795f59a 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 131 1.3E-65 T 23-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 RR42_RS02800 9df6ecbcc328182053eb20ede795f59a 135 Gene3D G3DSA:3.10.180.10 1 129 1.2E-45 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS02800 9df6ecbcc328182053eb20ede795f59a 135 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 23-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 RR42_RS02800 9df6ecbcc328182053eb20ede795f59a 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 1.3E-24 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RR42_RS02800 9df6ecbcc328182053eb20ede795f59a 135 PANTHER PTHR10374 1 128 8.5E-59 T 23-04-2016 RR42_RS02800 9df6ecbcc328182053eb20ede795f59a 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 23-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 RR42_RS00225 5d181d09f75668d18dee7f77e95755f6 194 PANTHER PTHR10245:SF53 19 194 1.9E-29 T 23-04-2016 RR42_RS00225 5d181d09f75668d18dee7f77e95755f6 194 Pfam PF07883 Cupin domain 122 188 2.6E-18 T 23-04-2016 IPR013096 Cupin 2, conserved barrel RR42_RS00225 5d181d09f75668d18dee7f77e95755f6 194 Gene3D G3DSA:2.60.120.10 71 192 2.6E-23 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS00225 5d181d09f75668d18dee7f77e95755f6 194 SUPERFAMILY SSF51182 71 194 3.71E-25 T 23-04-2016 IPR011051 RmlC-like cupin domain RR42_RS00225 5d181d09f75668d18dee7f77e95755f6 194 PANTHER PTHR10245 19 194 1.9E-29 T 23-04-2016 RR42_RS00225 5d181d09f75668d18dee7f77e95755f6 194 SUPERFAMILY SSF47413 17 84 3.1E-15 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS00225 5d181d09f75668d18dee7f77e95755f6 194 Pfam PF13560 Helix-turn-helix domain 19 72 7.9E-12 T 23-04-2016 RR42_RS00225 5d181d09f75668d18dee7f77e95755f6 194 Gene3D G3DSA:1.10.260.40 16 70 3.1E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS00225 5d181d09f75668d18dee7f77e95755f6 194 SMART SM00530 22 77 6.2E-11 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RR42_RS15615 602c3b3fd4a734f714cea2c8f0583150 311 PANTHER PTHR11122:SF14 4 76 5.0E-25 T 23-04-2016 RR42_RS15615 602c3b3fd4a734f714cea2c8f0583150 311 PANTHER PTHR11122:SF14 92 171 5.0E-25 T 23-04-2016 RR42_RS15615 602c3b3fd4a734f714cea2c8f0583150 311 Gene3D G3DSA:2.70.98.10 7 308 1.3E-30 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 RR42_RS15615 602c3b3fd4a734f714cea2c8f0583150 311 Pfam PF01263 Aldose 1-epimerase 14 306 3.4E-17 T 23-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 RR42_RS15615 602c3b3fd4a734f714cea2c8f0583150 311 SUPERFAMILY SSF74650 7 309 7.53E-40 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RR42_RS15615 602c3b3fd4a734f714cea2c8f0583150 311 PANTHER PTHR11122 4 76 5.0E-25 T 23-04-2016 RR42_RS15615 602c3b3fd4a734f714cea2c8f0583150 311 PANTHER PTHR11122 92 171 5.0E-25 T 23-04-2016 RR42_RS10960 028f9812156b7ef2c9fa3c39eeba74ba 298 PANTHER PTHR22981:SF27 3 287 3.6E-133 T 23-04-2016 RR42_RS10960 028f9812156b7ef2c9fa3c39eeba74ba 298 SUPERFAMILY SSF51735 3 163 1.77E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10960 028f9812156b7ef2c9fa3c39eeba74ba 298 Gene3D G3DSA:1.10.1040.10 166 287 4.6E-49 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RR42_RS10960 028f9812156b7ef2c9fa3c39eeba74ba 298 PANTHER PTHR22981 3 287 3.6E-133 T 23-04-2016 RR42_RS10960 028f9812156b7ef2c9fa3c39eeba74ba 298 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 161 2.1E-38 T 23-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 RR42_RS10960 028f9812156b7ef2c9fa3c39eeba74ba 298 SUPERFAMILY SSF48179 166 288 1.59E-39 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RR42_RS10960 028f9812156b7ef2c9fa3c39eeba74ba 298 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 167 286 1.8E-39 T 23-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 RR42_RS10960 028f9812156b7ef2c9fa3c39eeba74ba 298 Gene3D G3DSA:3.40.50.720 2 165 1.1E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10960 028f9812156b7ef2c9fa3c39eeba74ba 298 PIRSF PIRSF000103 1 291 1.4E-65 T 23-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 RR42_RS07685 a5fcd1f49c78f08442a07ce4ecb58e3b 396 Pfam PF07687 Peptidase dimerisation domain 195 289 2.1E-9 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS07685 a5fcd1f49c78f08442a07ce4ecb58e3b 396 Gene3D G3DSA:3.30.70.360 190 306 3.9E-38 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS07685 a5fcd1f49c78f08442a07ce4ecb58e3b 396 SUPERFAMILY SSF53187 307 395 2.17E-89 T 23-04-2016 RR42_RS07685 a5fcd1f49c78f08442a07ce4ecb58e3b 396 SUPERFAMILY SSF53187 13 206 2.17E-89 T 23-04-2016 RR42_RS07685 a5fcd1f49c78f08442a07ce4ecb58e3b 396 SUPERFAMILY SSF55031 192 305 9.42E-28 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS07685 a5fcd1f49c78f08442a07ce4ecb58e3b 396 PIRSF PIRSF005962 8 396 1.2E-119 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 RR42_RS07685 a5fcd1f49c78f08442a07ce4ecb58e3b 396 Pfam PF01546 Peptidase family M20/M25/M40 82 391 6.9E-32 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RR42_RS07685 a5fcd1f49c78f08442a07ce4ecb58e3b 396 PANTHER PTHR11014:SF63 1 395 7.5E-141 T 23-04-2016 RR42_RS07685 a5fcd1f49c78f08442a07ce4ecb58e3b 396 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 24 383 1.3E-106 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 RR42_RS07685 a5fcd1f49c78f08442a07ce4ecb58e3b 396 Gene3D G3DSA:3.40.630.10 307 395 2.6E-101 T 23-04-2016 RR42_RS07685 a5fcd1f49c78f08442a07ce4ecb58e3b 396 Gene3D G3DSA:3.40.630.10 10 187 2.6E-101 T 23-04-2016 RR42_RS07685 a5fcd1f49c78f08442a07ce4ecb58e3b 396 PANTHER PTHR11014 1 395 7.5E-141 T 23-04-2016 RR42_RS09005 a450b6cd53e607aea789b62d9cefc2e2 285 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 272 39.89 T 23-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 RR42_RS09005 a450b6cd53e607aea789b62d9cefc2e2 285 PANTHER PTHR37426:SF1 2 284 1.3E-107 T 23-04-2016 RR42_RS09005 a450b6cd53e607aea789b62d9cefc2e2 285 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 8.2E-72 T 23-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 RR42_RS09005 a450b6cd53e607aea789b62d9cefc2e2 285 SUPERFAMILY SSF53335 9 281 1.77E-93 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS09005 a450b6cd53e607aea789b62d9cefc2e2 285 PANTHER PTHR37426 2 284 1.3E-107 T 23-04-2016 RR42_RS09005 a450b6cd53e607aea789b62d9cefc2e2 285 Gene3D G3DSA:3.40.50.150 1 282 1.2E-116 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS05775 1883f300070af403ac70cc357042cc39 184 PANTHER PTHR34610 26 174 3.3E-20 T 23-04-2016 RR42_RS05775 1883f300070af403ac70cc357042cc39 184 SUPERFAMILY SSF88723 28 148 5.89E-12 T 23-04-2016 IPR029060 PIN domain-like RR42_RS05775 1883f300070af403ac70cc357042cc39 184 Pfam PF13470 PIN domain 28 143 1.9E-27 T 23-04-2016 IPR002716 PIN domain RR42_RS05775 1883f300070af403ac70cc357042cc39 184 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 28 147 1.2E-9 T 23-04-2016 IPR002850 PIN family, putative toxin-antitoxin system toxin component RR42_RS05775 1883f300070af403ac70cc357042cc39 184 PANTHER PTHR34610:SF3 26 174 3.3E-20 T 23-04-2016 RR42_RS20680 074b19a30c61daf8c16cccd3d56d3377 283 Pfam PF03922 OmpW family 73 283 3.8E-17 T 23-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 RR42_RS20680 074b19a30c61daf8c16cccd3d56d3377 283 SUPERFAMILY SSF56925 138 183 4.71E-15 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RR42_RS20680 074b19a30c61daf8c16cccd3d56d3377 283 SUPERFAMILY SSF56925 66 112 4.71E-15 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RR42_RS20680 074b19a30c61daf8c16cccd3d56d3377 283 SUPERFAMILY SSF56925 210 283 4.71E-15 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RR42_RS20680 074b19a30c61daf8c16cccd3d56d3377 283 Gene3D G3DSA:2.40.160.20 29 283 3.3E-57 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RR42_RS14200 2f61467b3ebed3a2ea730d8a2b8f1587 228 SUPERFAMILY SSF100950 50 226 2.8E-42 T 23-04-2016 RR42_RS14200 2f61467b3ebed3a2ea730d8a2b8f1587 228 Gene3D G3DSA:3.40.50.10420 50 226 1.4E-46 T 23-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RR42_RS14200 2f61467b3ebed3a2ea730d8a2b8f1587 228 PANTHER PTHR32479:SF11 1 226 2.8E-39 T 23-04-2016 RR42_RS14200 2f61467b3ebed3a2ea730d8a2b8f1587 228 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 98 225 5.1E-30 T 23-04-2016 IPR003741 LUD domain RR42_RS14200 2f61467b3ebed3a2ea730d8a2b8f1587 228 PANTHER PTHR32479 1 226 2.8E-39 T 23-04-2016 RR42_RS12415 17e3092596549f798d209ec7184a74bd 329 PIRSF PIRSF017082 2 328 9.5E-77 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS12415 17e3092596549f798d209ec7184a74bd 329 PANTHER PTHR30349:SF1 7 311 1.7E-69 T 23-04-2016 RR42_RS12415 17e3092596549f798d209ec7184a74bd 329 SUPERFAMILY SSF53850 118 293 2.87E-11 T 23-04-2016 RR42_RS12415 17e3092596549f798d209ec7184a74bd 329 PANTHER PTHR30349 7 311 1.7E-69 T 23-04-2016 RR42_RS12415 17e3092596549f798d209ec7184a74bd 329 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 325 2.7E-83 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS12100 94744c8e662c60092993dd0e17363ff1 450 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 16 434 2.2E-162 T 23-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 RR42_RS12100 94744c8e662c60092993dd0e17363ff1 450 PANTHER PTHR30011 6 443 9.5E-161 T 23-04-2016 RR42_RS12100 94744c8e662c60092993dd0e17363ff1 450 Gene3D G3DSA:3.20.20.30 352 441 6.4E-135 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RR42_RS12100 94744c8e662c60092993dd0e17363ff1 450 Gene3D G3DSA:3.20.20.30 8 310 6.4E-135 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RR42_RS12100 94744c8e662c60092993dd0e17363ff1 450 Pfam PF00296 Luciferase-like monooxygenase 23 390 3.2E-68 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RR42_RS12100 94744c8e662c60092993dd0e17363ff1 450 PANTHER PTHR30011:SF18 6 443 9.5E-161 T 23-04-2016 RR42_RS12100 94744c8e662c60092993dd0e17363ff1 450 SUPERFAMILY SSF51679 9 440 3.79E-128 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RR42_RS12100 94744c8e662c60092993dd0e17363ff1 450 PIRSF PIRSF000337 8 448 8.4E-161 T 23-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 RR42_RS31345 72b479496030226be85dad9b9e4978ca 103 SUPERFAMILY SSF48256 38 102 2.62E-16 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS31345 72b479496030226be85dad9b9e4978ca 103 PANTHER PTHR11739 40 103 7.6E-16 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS31345 72b479496030226be85dad9b9e4978ca 103 Gene3D G3DSA:1.10.580.10 45 102 4.0E-16 T 23-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 RR42_RS31345 72b479496030226be85dad9b9e4978ca 103 Pfam PF00285 Citrate synthase, C-terminal domain 40 102 4.1E-16 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS17830 435aad56523446e7bd3c354b2b2d59d1 327 PANTHER PTHR30349 12 289 1.5E-84 T 23-04-2016 RR42_RS17830 435aad56523446e7bd3c354b2b2d59d1 327 PIRSF PIRSF017082 1 326 4.0E-73 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS17830 435aad56523446e7bd3c354b2b2d59d1 327 PANTHER PTHR30349:SF32 12 289 1.5E-84 T 23-04-2016 RR42_RS17830 435aad56523446e7bd3c354b2b2d59d1 327 SUPERFAMILY SSF53850 115 295 1.18E-13 T 23-04-2016 RR42_RS17830 435aad56523446e7bd3c354b2b2d59d1 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 323 4.5E-84 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS21750 85a5746f569043f16bd3da3bdd8a0b6c 385 PANTHER PTHR30204 284 376 9.6E-18 T 23-04-2016 RR42_RS21750 85a5746f569043f16bd3da3bdd8a0b6c 385 SMART SM00422 292 362 6.2E-13 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RR42_RS21750 85a5746f569043f16bd3da3bdd8a0b6c 385 Gene3D G3DSA:1.10.1660.10 292 378 1.7E-22 T 23-04-2016 RR42_RS21750 85a5746f569043f16bd3da3bdd8a0b6c 385 SUPERFAMILY SSF46955 291 377 1.58E-20 T 23-04-2016 IPR009061 Putative DNA-binding domain RR42_RS21750 85a5746f569043f16bd3da3bdd8a0b6c 385 Pfam PF13411 MerR HTH family regulatory protein 292 360 1.0E-14 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RR42_RS02075 f6b12eb25bb422da8b4c7a41f612a91b 151 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 148 1.8E-35 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RR42_RS02075 f6b12eb25bb422da8b4c7a41f612a91b 151 PANTHER PTHR30505:SF6 1 148 1.8E-40 T 23-04-2016 RR42_RS02075 f6b12eb25bb422da8b4c7a41f612a91b 151 PANTHER PTHR30505 1 148 1.8E-40 T 23-04-2016 RR42_RS02075 f6b12eb25bb422da8b4c7a41f612a91b 151 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 4 147 2.0E-41 T 23-04-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RR42_RS02075 f6b12eb25bb422da8b4c7a41f612a91b 151 Gene3D G3DSA:3.40.930.10 1 149 1.5E-45 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RR42_RS02075 f6b12eb25bb422da8b4c7a41f612a91b 151 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RR42_RS02075 f6b12eb25bb422da8b4c7a41f612a91b 151 SUPERFAMILY SSF55804 1 149 3.14E-44 T 23-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 RR42_RS09725 ae5915d1f5ef8e73e90383234e58c4ac 469 Gene3D G3DSA:1.20.1600.10 47 463 6.1E-80 T 23-04-2016 RR42_RS09725 ae5915d1f5ef8e73e90383234e58c4ac 469 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 7 458 1.6E-71 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RR42_RS09725 ae5915d1f5ef8e73e90383234e58c4ac 469 SUPERFAMILY SSF56954 4 463 8.24E-82 T 23-04-2016 RR42_RS09725 ae5915d1f5ef8e73e90383234e58c4ac 469 PANTHER PTHR30203 33 460 8.5E-67 T 23-04-2016 RR42_RS09725 ae5915d1f5ef8e73e90383234e58c4ac 469 Pfam PF02321 Outer membrane efflux protein 276 457 4.2E-23 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RR42_RS09725 ae5915d1f5ef8e73e90383234e58c4ac 469 Pfam PF02321 Outer membrane efflux protein 62 248 2.1E-16 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RR42_RS09725 ae5915d1f5ef8e73e90383234e58c4ac 469 PANTHER PTHR30203:SF3 33 460 8.5E-67 T 23-04-2016 RR42_RS11755 fa014cb26b0fc32a1dc54adcdbbd2659 322 PANTHER PTHR12715 3 317 1.6E-76 T 23-04-2016 RR42_RS11755 fa014cb26b0fc32a1dc54adcdbbd2659 322 SUPERFAMILY SSF103481 39 137 6.28E-5 T 23-04-2016 RR42_RS11755 fa014cb26b0fc32a1dc54adcdbbd2659 322 SUPERFAMILY SSF103481 212 314 9.81E-7 T 23-04-2016 RR42_RS11755 fa014cb26b0fc32a1dc54adcdbbd2659 322 PANTHER PTHR12715:SF21 3 317 1.6E-76 T 23-04-2016 RR42_RS11755 fa014cb26b0fc32a1dc54adcdbbd2659 322 Pfam PF00892 EamA-like transporter family 3 136 4.6E-10 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS16555 78fa1522eac5d14f7920e52112d77b39 204 Pfam PF00857 Isochorismatase family 26 197 3.5E-20 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RR42_RS16555 78fa1522eac5d14f7920e52112d77b39 204 PANTHER PTHR11080 1 204 5.9E-16 T 23-04-2016 RR42_RS16555 78fa1522eac5d14f7920e52112d77b39 204 Gene3D G3DSA:3.40.50.850 19 200 5.3E-34 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RR42_RS16555 78fa1522eac5d14f7920e52112d77b39 204 SUPERFAMILY SSF52499 14 203 2.75E-37 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RR42_RS03730 bb22474f5a65a36dcfca8565556d52ad 305 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 51 275 4.0E-115 T 23-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 RR42_RS03730 bb22474f5a65a36dcfca8565556d52ad 305 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 52 274 1.3E-112 T 23-04-2016 IPR022488 Polyphosphate kinase-2-related RR42_RS03730 bb22474f5a65a36dcfca8565556d52ad 305 Gene3D G3DSA:3.40.50.300 45 291 7.0E-108 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03730 bb22474f5a65a36dcfca8565556d52ad 305 PANTHER PTHR34383 11 305 1.4E-200 T 23-04-2016 RR42_RS03730 bb22474f5a65a36dcfca8565556d52ad 305 SUPERFAMILY SSF52540 81 270 1.5E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03730 bb22474f5a65a36dcfca8565556d52ad 305 PANTHER PTHR34383:SF1 11 305 1.4E-200 T 23-04-2016 RR42_RS03730 bb22474f5a65a36dcfca8565556d52ad 305 PIRSF PIRSF028756 11 305 5.0E-135 T 23-04-2016 IPR016898 Polyphosphate kinase 2 RR42_RS01840 ef34e331889d81269947abed499de2fc 172 Pfam PF02556 Preprotein translocase subunit SecB 8 147 1.6E-53 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RR42_RS01840 ef34e331889d81269947abed499de2fc 172 PANTHER PTHR36918 1 160 2.3E-50 T 23-04-2016 RR42_RS01840 ef34e331889d81269947abed499de2fc 172 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 10 147 6.9E-45 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RR42_RS01840 ef34e331889d81269947abed499de2fc 172 PANTHER PTHR36918:SF1 1 160 2.3E-50 T 23-04-2016 RR42_RS01840 ef34e331889d81269947abed499de2fc 172 Gene3D G3DSA:3.10.420.10 6 155 3.2E-58 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RR42_RS01840 ef34e331889d81269947abed499de2fc 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 127 145 4.6E-28 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RR42_RS01840 ef34e331889d81269947abed499de2fc 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 77 97 4.6E-28 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RR42_RS01840 ef34e331889d81269947abed499de2fc 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 17 34 4.6E-28 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RR42_RS01840 ef34e331889d81269947abed499de2fc 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 101 123 4.6E-28 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RR42_RS01840 ef34e331889d81269947abed499de2fc 172 Hamap MF_00821 Protein-export protein SecB [secB]. 1 149 30.7 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RR42_RS01840 ef34e331889d81269947abed499de2fc 172 SUPERFAMILY SSF54611 3 146 1.0E-49 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RR42_RS13195 d27fbcc16906e8ccd92d8016bf8817b7 298 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 83 295 3.0E-53 T 23-04-2016 RR42_RS13195 d27fbcc16906e8ccd92d8016bf8817b7 298 SUPERFAMILY SSF53335 88 293 6.91E-35 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS13195 d27fbcc16906e8ccd92d8016bf8817b7 298 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 76 297 32.66 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RR42_RS13195 d27fbcc16906e8ccd92d8016bf8817b7 298 Gene3D G3DSA:3.40.50.150 88 296 1.1E-55 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS13195 d27fbcc16906e8ccd92d8016bf8817b7 298 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 77 296 4.9E-55 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RR42_RS13195 d27fbcc16906e8ccd92d8016bf8817b7 298 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 210 225 - T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RR42_RS13195 d27fbcc16906e8ccd92d8016bf8817b7 298 PANTHER PTHR11579 72 293 4.6E-60 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RR42_RS17230 5f4d6710be56fe4a615d474eb5a93797 224 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 195 2.0E-38 T 23-04-2016 RR42_RS17230 5f4d6710be56fe4a615d474eb5a93797 224 Gene3D G3DSA:1.20.1440.100 15 80 7.0E-31 T 23-04-2016 RR42_RS17230 5f4d6710be56fe4a615d474eb5a93797 224 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 208 3.8E-34 T 23-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial RR42_RS17230 5f4d6710be56fe4a615d474eb5a93797 224 SUPERFAMILY SSF56784 2 218 3.22E-32 T 23-04-2016 IPR023214 HAD-like domain RR42_RS17230 5f4d6710be56fe4a615d474eb5a93797 224 Gene3D G3DSA:3.40.50.1000 81 223 9.7E-48 T 23-04-2016 IPR023214 HAD-like domain RR42_RS17230 5f4d6710be56fe4a615d474eb5a93797 224 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 197 4.3E-17 T 23-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 RR42_RS17230 5f4d6710be56fe4a615d474eb5a93797 224 PANTHER PTHR10000:SF10 1 223 1.2E-42 T 23-04-2016 RR42_RS17230 5f4d6710be56fe4a615d474eb5a93797 224 PANTHER PTHR10000 1 223 1.2E-42 T 23-04-2016 RR42_RS11970 239183395a0bf65d9a9bdc064a920d62 270 Pfam PF04951 D-aminopeptidase 1 260 7.4E-99 T 23-04-2016 IPR007035 Peptidase M55, D-aminopeptidase RR42_RS11970 239183395a0bf65d9a9bdc064a920d62 270 Gene3D G3DSA:3.40.50.10780 1 206 3.8E-80 T 23-04-2016 IPR027476 D-aminopeptidase, N-terminal RR42_RS11970 239183395a0bf65d9a9bdc064a920d62 270 PIRSF PIRSF015853 1 270 5.6E-103 T 23-04-2016 IPR007035 Peptidase M55, D-aminopeptidase RR42_RS11970 239183395a0bf65d9a9bdc064a920d62 270 SUPERFAMILY SSF63992 1 269 3.66E-101 T 23-04-2016 IPR007035 Peptidase M55, D-aminopeptidase RR42_RS03810 715d5565568417583621997ffe35fa2d 782 Pfam PF11339 Protein of unknown function (DUF3141) 14 586 2.5E-281 T 23-04-2016 IPR024501 Protein of unknown function DUF3141 RR42_RS03810 715d5565568417583621997ffe35fa2d 782 SUPERFAMILY SSF53474 42 369 1.67E-26 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS03810 715d5565568417583621997ffe35fa2d 782 Gene3D G3DSA:3.40.50.1820 111 339 4.1E-8 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS06040 e28c7fd72bbbe607b5056704d31f0a1d 77 Pfam PF12088 Protein of unknown function (DUF3565) 7 62 1.9E-29 T 23-04-2016 IPR021948 Protein of unknown function DUF3565 RR42_RS16315 a731a914146bdba016902567e4739bfb 643 Gene3D G3DSA:3.40.390.10 497 526 5.6E-7 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RR42_RS16315 a731a914146bdba016902567e4739bfb 643 SUPERFAMILY SSF55486 448 529 2.2E-5 T 23-04-2016 RR42_RS16315 a731a914146bdba016902567e4739bfb 643 SUPERFAMILY SSF55486 502 559 8.0E-8 T 23-04-2016 RR42_RS16315 a731a914146bdba016902567e4739bfb 643 Pfam PF13582 Metallo-peptidase family M12B Reprolysin-like 408 521 6.2E-5 T 23-04-2016 RR42_RS14505 ae108a2156f974bc7eb5a90a0d413d6c 544 SUPERFAMILY SSF53850 41 527 2.9E-120 T 23-04-2016 RR42_RS14505 ae108a2156f974bc7eb5a90a0d413d6c 544 Gene3D G3DSA:3.40.190.10 205 324 8.2E-39 T 23-04-2016 RR42_RS14505 ae108a2156f974bc7eb5a90a0d413d6c 544 PIRSF PIRSF002741 11 536 9.7E-96 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RR42_RS14505 ae108a2156f974bc7eb5a90a0d413d6c 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 448 1.4E-88 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain RR42_RS14505 ae108a2156f974bc7eb5a90a0d413d6c 544 Gene3D G3DSA:3.10.105.10 325 513 4.6E-49 T 23-04-2016 RR42_RS14505 ae108a2156f974bc7eb5a90a0d413d6c 544 PANTHER PTHR30290 315 527 1.7E-111 T 23-04-2016 RR42_RS14505 ae108a2156f974bc7eb5a90a0d413d6c 544 PANTHER PTHR30290 8 298 1.7E-111 T 23-04-2016 RR42_RS14505 ae108a2156f974bc7eb5a90a0d413d6c 544 Gene3D G3DSA:3.90.76.10 57 204 1.2E-31 T 23-04-2016 RR42_RS14220 279dbfa11a3935a383f9fd3d01840e49 369 Gene3D G3DSA:3.50.50.60 152 266 2.5E-17 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS14220 279dbfa11a3935a383f9fd3d01840e49 369 SUPERFAMILY SSF51905 153 272 3.89E-13 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS14220 279dbfa11a3935a383f9fd3d01840e49 369 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 135 143 3.5E-13 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RR42_RS14220 279dbfa11a3935a383f9fd3d01840e49 369 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 87 97 3.5E-13 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RR42_RS14220 279dbfa11a3935a383f9fd3d01840e49 369 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 174 198 3.5E-13 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RR42_RS14220 279dbfa11a3935a383f9fd3d01840e49 369 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 30 52 3.5E-13 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RR42_RS14220 279dbfa11a3935a383f9fd3d01840e49 369 PANTHER PTHR22912:SF158 28 344 1.9E-92 T 23-04-2016 RR42_RS14220 279dbfa11a3935a383f9fd3d01840e49 369 PANTHER PTHR22912 28 344 1.9E-92 T 23-04-2016 RR42_RS14220 279dbfa11a3935a383f9fd3d01840e49 369 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 2.7E-14 T 23-04-2016 RR42_RS14220 279dbfa11a3935a383f9fd3d01840e49 369 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 2.7E-14 T 23-04-2016 RR42_RS14220 279dbfa11a3935a383f9fd3d01840e49 369 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 2.7E-14 T 23-04-2016 RR42_RS14220 279dbfa11a3935a383f9fd3d01840e49 369 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 31 50 2.7E-14 T 23-04-2016 RR42_RS14220 279dbfa11a3935a383f9fd3d01840e49 369 Hamap MF_01685 Ferredoxin--NADP reductase. 28 354 40.877 T 23-04-2016 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 RR42_RS14220 279dbfa11a3935a383f9fd3d01840e49 369 Gene3D G3DSA:3.50.50.60 272 352 2.7E-37 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS14220 279dbfa11a3935a383f9fd3d01840e49 369 Gene3D G3DSA:3.50.50.60 29 149 2.7E-37 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS14220 279dbfa11a3935a383f9fd3d01840e49 369 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 31 318 9.3E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS14220 279dbfa11a3935a383f9fd3d01840e49 369 SUPERFAMILY SSF51905 267 340 1.18E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS14220 279dbfa11a3935a383f9fd3d01840e49 369 SUPERFAMILY SSF51905 29 187 1.18E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS09670 33feba316ae9aaf6b872287e9e8b99ed 109 SUPERFAMILY SSF49401 2 109 5.97E-18 T 23-04-2016 IPR008966 Adhesion domain RR42_RS09670 33feba316ae9aaf6b872287e9e8b99ed 109 Gene3D G3DSA:2.60.40.1090 2 109 2.9E-21 T 23-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RR42_RS09670 33feba316ae9aaf6b872287e9e8b99ed 109 Pfam PF00419 Fimbrial protein 3 109 7.1E-11 T 23-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RR42_RS05910 4226618743d767d6998579b0b07522dd 574 SUPERFAMILY SSF52540 287 503 2.01E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05910 4226618743d767d6998579b0b07522dd 574 Gene3D G3DSA:3.40.50.300 1 205 2.6E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05910 4226618743d767d6998579b0b07522dd 574 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 504 1.6E-18 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal RR42_RS05910 4226618743d767d6998579b0b07522dd 574 PANTHER PTHR11059 2 562 1.2E-156 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RR42_RS05910 4226618743d767d6998579b0b07522dd 574 SUPERFAMILY SSF52540 1 216 1.27E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05910 4226618743d767d6998579b0b07522dd 574 SUPERFAMILY SSF52540 3 50 2.01E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05910 4226618743d767d6998579b0b07522dd 574 Gene3D G3DSA:3.40.50.300 427 496 1.9E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05910 4226618743d767d6998579b0b07522dd 574 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 553 1.8E-148 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RR42_RS05910 4226618743d767d6998579b0b07522dd 574 PIRSF PIRSF003128 1 557 1.3E-152 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RR42_RS04300 32f95b7469de475c7608b5b4dec9fca0 112 PANTHER PTHR30115 1 112 1.1E-70 T 23-04-2016 RR42_RS04300 32f95b7469de475c7608b5b4dec9fca0 112 Gene3D G3DSA:3.30.70.120 1 112 3.6E-50 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RR42_RS04300 32f95b7469de475c7608b5b4dec9fca0 112 PANTHER PTHR30115:SF12 1 112 1.1E-70 T 23-04-2016 RR42_RS04300 32f95b7469de475c7608b5b4dec9fca0 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 8.1E-44 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RR42_RS04300 32f95b7469de475c7608b5b4dec9fca0 112 PIRSF PIRSF039144 1 112 6.6E-56 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RR42_RS04300 32f95b7469de475c7608b5b4dec9fca0 112 SMART SM00938 4 105 1.1E-66 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RR42_RS04300 32f95b7469de475c7608b5b4dec9fca0 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 23-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 RR42_RS04300 32f95b7469de475c7608b5b4dec9fca0 112 PRINTS PR00340 P-II protein signature 52 75 1.9E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RR42_RS04300 32f95b7469de475c7608b5b4dec9fca0 112 PRINTS PR00340 P-II protein signature 23 41 1.9E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RR42_RS04300 32f95b7469de475c7608b5b4dec9fca0 112 PRINTS PR00340 P-II protein signature 2 17 1.9E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RR42_RS04300 32f95b7469de475c7608b5b4dec9fca0 112 PRINTS PR00340 P-II protein signature 83 103 1.9E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RR42_RS04300 32f95b7469de475c7608b5b4dec9fca0 112 SUPERFAMILY SSF54913 1 112 5.72E-46 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta RR42_RS04300 32f95b7469de475c7608b5b4dec9fca0 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 23-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 RR42_RS10550 08b895a96cfe296dcd59c54f6fb0138b 422 PANTHER PTHR22893:SF6 1 357 1.1E-144 T 23-04-2016 RR42_RS10550 08b895a96cfe296dcd59c54f6fb0138b 422 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 13 352 1.9E-50 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RR42_RS10550 08b895a96cfe296dcd59c54f6fb0138b 422 Gene3D G3DSA:3.20.20.70 10 356 1.3E-109 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS10550 08b895a96cfe296dcd59c54f6fb0138b 422 SUPERFAMILY SSF51395 10 363 2.88E-100 T 23-04-2016 RR42_RS10550 08b895a96cfe296dcd59c54f6fb0138b 422 PANTHER PTHR22893 1 357 1.1E-144 T 23-04-2016 RR42_RS09150 343f0febde08b37eed6efa229b55b3ac 250 SUPERFAMILY SSF56524 48 249 1.57E-62 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RR42_RS09150 343f0febde08b37eed6efa229b55b3ac 250 Gene3D G3DSA:3.90.420.10 88 247 1.2E-50 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RR42_RS09150 343f0febde08b37eed6efa229b55b3ac 250 PANTHER PTHR19372 17 248 7.0E-117 T 23-04-2016 RR42_RS09150 343f0febde08b37eed6efa229b55b3ac 250 PANTHER PTHR19372:SF9 17 248 7.0E-117 T 23-04-2016 RR42_RS09150 343f0febde08b37eed6efa229b55b3ac 250 Pfam PF00174 Oxidoreductase molybdopterin binding domain 95 239 9.8E-31 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RR42_RS15570 405494094f53041e07b2fc5735200437 167 PANTHER PTHR21058 8 157 6.1E-63 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RR42_RS15570 405494094f53041e07b2fc5735200437 167 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 10 151 27.976 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RR42_RS15570 405494094f53041e07b2fc5735200437 167 Gene3D G3DSA:3.40.50.960 6 152 9.6E-56 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RR42_RS15570 405494094f53041e07b2fc5735200437 167 SUPERFAMILY SSF52121 6 151 5.23E-54 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RR42_RS15570 405494094f53041e07b2fc5735200437 167 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 14 148 3.9E-49 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RR42_RS15570 405494094f53041e07b2fc5735200437 167 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 15 147 5.0E-39 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RR42_RS06550 82aeab213a0d9d2d2ceb2869d9dfcf1e 181 Pfam PF13426 PAS domain 15 116 8.0E-11 T 23-04-2016 IPR000014 PAS domain RR42_RS06550 82aeab213a0d9d2d2ceb2869d9dfcf1e 181 SMART SM00421 121 178 8.0E-15 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS06550 82aeab213a0d9d2d2ceb2869d9dfcf1e 181 ProSitePatterns PS00622 LuxR-type HTH domain signature. 138 165 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS06550 82aeab213a0d9d2d2ceb2869d9dfcf1e 181 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 118 6.3E-9 T 23-04-2016 IPR000014 PAS domain RR42_RS06550 82aeab213a0d9d2d2ceb2869d9dfcf1e 181 SUPERFAMILY SSF55785 6 114 1.15E-12 T 23-04-2016 IPR000014 PAS domain RR42_RS06550 82aeab213a0d9d2d2ceb2869d9dfcf1e 181 Gene3D G3DSA:3.30.450.20 6 114 5.7E-12 T 23-04-2016 RR42_RS06550 82aeab213a0d9d2d2ceb2869d9dfcf1e 181 SUPERFAMILY SSF46894 109 180 7.14E-16 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS06550 82aeab213a0d9d2d2ceb2869d9dfcf1e 181 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 124 138 2.7E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS06550 82aeab213a0d9d2d2ceb2869d9dfcf1e 181 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 166 2.7E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS06550 82aeab213a0d9d2d2ceb2869d9dfcf1e 181 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 154 2.7E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS06550 82aeab213a0d9d2d2ceb2869d9dfcf1e 181 Pfam PF00196 Bacterial regulatory proteins, luxR family 123 176 1.5E-14 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS06550 82aeab213a0d9d2d2ceb2869d9dfcf1e 181 Gene3D G3DSA:1.10.10.10 123 181 3.6E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19820 5de3c320aec576e8cfbf59e6f4758d55 127 Pfam PF10861 Protein of Unknown function (DUF2784) 5 111 2.1E-41 T 23-04-2016 IPR021218 Protein of unknown function DUF2784 RR42_RS14145 091efd10d511f7901e50a18ba2c6ed8a 130 Gene3D G3DSA:2.102.10.10 13 121 4.9E-16 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RR42_RS14145 091efd10d511f7901e50a18ba2c6ed8a 130 PANTHER PTHR40261:SF2 37 117 7.4E-21 T 23-04-2016 RR42_RS14145 091efd10d511f7901e50a18ba2c6ed8a 130 PANTHER PTHR40261 37 117 7.4E-21 T 23-04-2016 RR42_RS14145 091efd10d511f7901e50a18ba2c6ed8a 130 SUPERFAMILY SSF50022 15 119 5.5E-21 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RR42_RS14145 091efd10d511f7901e50a18ba2c6ed8a 130 Pfam PF00355 Rieske [2Fe-2S] domain 29 102 9.5E-7 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RR42_RS01555 2a1a8ebca70ecf4af68a80a0675a4862 396 Gene3D G3DSA:3.90.230.10 160 391 5.3E-43 T 23-04-2016 IPR000994 Peptidase M24, structural domain RR42_RS01555 2a1a8ebca70ecf4af68a80a0675a4862 396 PANTHER PTHR10804:SF86 141 381 3.2E-35 T 23-04-2016 RR42_RS01555 2a1a8ebca70ecf4af68a80a0675a4862 396 Pfam PF00557 Metallopeptidase family M24 169 377 2.6E-33 T 23-04-2016 IPR000994 Peptidase M24, structural domain RR42_RS01555 2a1a8ebca70ecf4af68a80a0675a4862 396 SUPERFAMILY SSF53092 2 158 9.68E-14 T 23-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal RR42_RS01555 2a1a8ebca70ecf4af68a80a0675a4862 396 Pfam PF01321 Creatinase/Prolidase N-terminal domain 12 159 4.4E-7 T 23-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 RR42_RS01555 2a1a8ebca70ecf4af68a80a0675a4862 396 SUPERFAMILY SSF55920 160 390 1.96E-48 T 23-04-2016 IPR000994 Peptidase M24, structural domain RR42_RS01555 2a1a8ebca70ecf4af68a80a0675a4862 396 PANTHER PTHR10804 141 381 3.2E-35 T 23-04-2016 RR42_RS01555 2a1a8ebca70ecf4af68a80a0675a4862 396 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 324 336 - T 23-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site RR42_RS01555 2a1a8ebca70ecf4af68a80a0675a4862 396 Gene3D G3DSA:3.40.350.10 10 158 1.6E-16 T 23-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RR42_RS19730 61c9b1583083f4bdae0eb6ae36719dbe 195 Gene3D G3DSA:3.40.50.10490 4 191 4.0E-61 T 23-04-2016 RR42_RS19730 61c9b1583083f4bdae0eb6ae36719dbe 195 Pfam PF13580 SIS domain 10 145 1.9E-33 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RR42_RS19730 61c9b1583083f4bdae0eb6ae36719dbe 195 PANTHER PTHR30390:SF5 3 194 9.2E-85 T 23-04-2016 RR42_RS19730 61c9b1583083f4bdae0eb6ae36719dbe 195 SUPERFAMILY SSF53697 2 190 3.64E-57 T 23-04-2016 RR42_RS19730 61c9b1583083f4bdae0eb6ae36719dbe 195 PANTHER PTHR30390 3 194 9.2E-85 T 23-04-2016 RR42_RS19730 61c9b1583083f4bdae0eb6ae36719dbe 195 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 191 36.501 T 23-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 RR42_RS16400 be5df43a5d36b400e741dedbaed27da2 311 PANTHER PTHR10587 13 300 4.0E-120 T 23-04-2016 RR42_RS16400 be5df43a5d36b400e741dedbaed27da2 311 Pfam PF01522 Polysaccharide deacetylase 75 186 1.9E-12 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RR42_RS16400 be5df43a5d36b400e741dedbaed27da2 311 SUPERFAMILY SSF88713 10 302 1.03E-73 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RR42_RS16400 be5df43a5d36b400e741dedbaed27da2 311 PANTHER PTHR10587:SF72 13 300 4.0E-120 T 23-04-2016 RR42_RS16400 be5df43a5d36b400e741dedbaed27da2 311 Gene3D G3DSA:3.20.20.370 10 302 1.1E-90 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RR42_RS02215 8803497d1dc5e048a8591547cfc86a8c 237 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 6 106 3.0E-28 T 23-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RR42_RS02215 8803497d1dc5e048a8591547cfc86a8c 237 SUPERFAMILY SSF46548 102 230 4.88E-23 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RR42_RS02215 8803497d1dc5e048a8591547cfc86a8c 237 Gene3D G3DSA:3.10.20.30 3 101 1.6E-28 T 23-04-2016 IPR012675 Beta-grasp domain RR42_RS02215 8803497d1dc5e048a8591547cfc86a8c 237 Gene3D G3DSA:1.10.1060.10 102 230 4.1E-25 T 23-04-2016 RR42_RS02215 8803497d1dc5e048a8591547cfc86a8c 237 SUPERFAMILY SSF54292 3 101 1.07E-22 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS02215 8803497d1dc5e048a8591547cfc86a8c 237 Pfam PF13183 4Fe-4S dicluster domain 144 214 1.0E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RR42_RS02215 8803497d1dc5e048a8591547cfc86a8c 237 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 14 225 7.8E-56 T 23-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RR42_RS02215 8803497d1dc5e048a8591547cfc86a8c 237 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 51 59 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RR42_RS02215 8803497d1dc5e048a8591547cfc86a8c 237 PANTHER PTHR11921 6 234 7.1E-51 T 23-04-2016 RR42_RS15855 27c0e9e9b246e26e77a89030f4cb0bd3 424 Pfam PF01979 Amidohydrolase family 225 420 2.1E-10 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RR42_RS15855 27c0e9e9b246e26e77a89030f4cb0bd3 424 SUPERFAMILY SSF51338 1 55 7.75E-28 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS15855 27c0e9e9b246e26e77a89030f4cb0bd3 424 SUPERFAMILY SSF51338 366 422 7.75E-28 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS15855 27c0e9e9b246e26e77a89030f4cb0bd3 424 Gene3D G3DSA:3.20.20.140 69 387 4.1E-84 T 23-04-2016 RR42_RS15855 27c0e9e9b246e26e77a89030f4cb0bd3 424 PANTHER PTHR11647 1 422 2.5E-128 T 23-04-2016 RR42_RS15855 27c0e9e9b246e26e77a89030f4cb0bd3 424 Gene3D G3DSA:2.30.40.10 2 68 1.4E-14 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS15855 27c0e9e9b246e26e77a89030f4cb0bd3 424 Hamap MF_00220_B Dihydroorotase [pyrC]. 2 424 32.564 T 23-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RR42_RS15855 27c0e9e9b246e26e77a89030f4cb0bd3 424 SUPERFAMILY SSF51556 56 366 1.49E-84 T 23-04-2016 IPR032466 Metal-dependent hydrolase RR42_RS15855 27c0e9e9b246e26e77a89030f4cb0bd3 424 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 19 422 1.6E-96 T 23-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RR42_RS15855 27c0e9e9b246e26e77a89030f4cb0bd3 424 PANTHER PTHR11647:SF70 1 422 2.5E-128 T 23-04-2016 RR42_RS00840 d68ab743a42ef8eb249b43c28d387128 270 SUPERFAMILY SSF51735 4 257 5.76E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS00840 d68ab743a42ef8eb249b43c28d387128 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.8E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS00840 d68ab743a42ef8eb249b43c28d387128 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.8E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS00840 d68ab743a42ef8eb249b43c28d387128 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.8E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS00840 d68ab743a42ef8eb249b43c28d387128 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.8E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS00840 d68ab743a42ef8eb249b43c28d387128 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.8E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS00840 d68ab743a42ef8eb249b43c28d387128 270 PANTHER PTHR24322 8 132 5.5E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS00840 d68ab743a42ef8eb249b43c28d387128 270 PANTHER PTHR24322 158 190 5.5E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS00840 d68ab743a42ef8eb249b43c28d387128 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.2E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS00840 d68ab743a42ef8eb249b43c28d387128 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.2E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS00840 d68ab743a42ef8eb249b43c28d387128 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.2E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS00840 d68ab743a42ef8eb249b43c28d387128 270 Pfam PF00106 short chain dehydrogenase 5 198 3.7E-42 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS00840 d68ab743a42ef8eb249b43c28d387128 270 Gene3D G3DSA:3.40.50.720 6 258 3.3E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS16640 24d069ea1b8456afa2b6d8d228b26b1d 294 Gene3D G3DSA:3.40.190.10 195 263 9.3E-15 T 23-04-2016 RR42_RS16640 24d069ea1b8456afa2b6d8d228b26b1d 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 2.5E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS16640 24d069ea1b8456afa2b6d8d228b26b1d 294 SUPERFAMILY SSF53850 90 290 3.88E-33 T 23-04-2016 RR42_RS16640 24d069ea1b8456afa2b6d8d228b26b1d 294 PANTHER PTHR30126 4 275 8.0E-56 T 23-04-2016 RR42_RS16640 24d069ea1b8456afa2b6d8d228b26b1d 294 Gene3D G3DSA:3.40.190.10 91 194 4.3E-21 T 23-04-2016 RR42_RS16640 24d069ea1b8456afa2b6d8d228b26b1d 294 SUPERFAMILY SSF46785 4 113 1.07E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS16640 24d069ea1b8456afa2b6d8d228b26b1d 294 Pfam PF03466 LysR substrate binding domain 90 288 1.3E-36 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS16640 24d069ea1b8456afa2b6d8d228b26b1d 294 Gene3D G3DSA:1.10.10.10 4 87 2.6E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS16640 24d069ea1b8456afa2b6d8d228b26b1d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 4.9E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS16640 24d069ea1b8456afa2b6d8d228b26b1d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.9E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS16640 24d069ea1b8456afa2b6d8d228b26b1d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 4.9E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS11915 7c7bcaddfdd5613ede9bec13588b5c5f 1171 PANTHER PTHR18937 2 429 4.2E-264 T 23-04-2016 RR42_RS11915 7c7bcaddfdd5613ede9bec13588b5c5f 1171 PANTHER PTHR18937 448 1169 4.2E-264 T 23-04-2016 RR42_RS11915 7c7bcaddfdd5613ede9bec13588b5c5f 1171 PANTHER PTHR18937:SF261 2 429 4.2E-264 T 23-04-2016 RR42_RS11915 7c7bcaddfdd5613ede9bec13588b5c5f 1171 Gene3D G3DSA:3.40.50.300 408 409 2.9E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11915 7c7bcaddfdd5613ede9bec13588b5c5f 1171 Gene3D G3DSA:3.40.50.300 1054 1167 2.9E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11915 7c7bcaddfdd5613ede9bec13588b5c5f 1171 Gene3D G3DSA:3.40.50.300 2 187 2.9E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11915 7c7bcaddfdd5613ede9bec13588b5c5f 1171 SMART SM00968 518 625 1.1E-7 T 23-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 RR42_RS11915 7c7bcaddfdd5613ede9bec13588b5c5f 1171 PANTHER PTHR18937:SF261 448 1169 4.2E-264 T 23-04-2016 RR42_RS11915 7c7bcaddfdd5613ede9bec13588b5c5f 1171 SUPERFAMILY SSF52540 2 213 6.04E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11915 7c7bcaddfdd5613ede9bec13588b5c5f 1171 SUPERFAMILY SSF52540 1047 1162 6.04E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11915 7c7bcaddfdd5613ede9bec13588b5c5f 1171 PIRSF PIRSF005719 1 1170 3.6E-252 T 23-04-2016 IPR024704 Structural maintenance of chromosomes protein RR42_RS11915 7c7bcaddfdd5613ede9bec13588b5c5f 1171 SUPERFAMILY SSF75553 484 672 1.03E-8 T 23-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 RR42_RS11915 7c7bcaddfdd5613ede9bec13588b5c5f 1171 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1154 5.2E-64 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal RR42_RS11915 7c7bcaddfdd5613ede9bec13588b5c5f 1171 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1163 22.068 T 23-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 RR42_RS11915 7c7bcaddfdd5613ede9bec13588b5c5f 1171 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1161 0.0 T 23-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 RR42_RS11915 7c7bcaddfdd5613ede9bec13588b5c5f 1171 Pfam PF06470 SMC proteins Flexible Hinge Domain 522 623 7.6E-6 T 23-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 RR42_RS13965 b4a01b68a9b6d06658adebc291c2368c 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 6.39E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS13965 b4a01b68a9b6d06658adebc291c2368c 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 6.39E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS13965 b4a01b68a9b6d06658adebc291c2368c 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 6.39E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS13965 b4a01b68a9b6d06658adebc291c2368c 301 Gene3D G3DSA:1.10.10.10 8 87 1.6E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS13965 b4a01b68a9b6d06658adebc291c2368c 301 Pfam PF03466 LysR substrate binding domain 95 295 5.4E-42 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS13965 b4a01b68a9b6d06658adebc291c2368c 301 SUPERFAMILY SSF53850 95 297 6.73E-40 T 23-04-2016 RR42_RS13965 b4a01b68a9b6d06658adebc291c2368c 301 Gene3D G3DSA:3.40.190.10 181 261 6.7E-18 T 23-04-2016 RR42_RS13965 b4a01b68a9b6d06658adebc291c2368c 301 SUPERFAMILY SSF46785 5 114 3.96E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS13965 b4a01b68a9b6d06658adebc291c2368c 301 PANTHER PTHR30126:SF36 8 295 3.3E-115 T 23-04-2016 RR42_RS13965 b4a01b68a9b6d06658adebc291c2368c 301 PANTHER PTHR30126 8 295 3.3E-115 T 23-04-2016 RR42_RS13965 b4a01b68a9b6d06658adebc291c2368c 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 5.4E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS13965 b4a01b68a9b6d06658adebc291c2368c 301 Gene3D G3DSA:3.40.190.10 95 180 3.5E-13 T 23-04-2016 RR42_RS04920 223ebca10cb2decd36cd07b247d14b9b 805 Gene3D G3DSA:3.30.460.10 277 408 1.1E-42 T 23-04-2016 RR42_RS04920 223ebca10cb2decd36cd07b247d14b9b 805 SUPERFAMILY SSF81271 458 530 3.27E-21 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RR42_RS04920 223ebca10cb2decd36cd07b247d14b9b 805 SUPERFAMILY SSF81301 275 448 6.05E-58 T 23-04-2016 RR42_RS04920 223ebca10cb2decd36cd07b247d14b9b 805 Gene3D G3DSA:3.10.20.30 471 531 2.0E-20 T 23-04-2016 IPR012675 Beta-grasp domain RR42_RS04920 223ebca10cb2decd36cd07b247d14b9b 805 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 109 798 4.0E-219 T 23-04-2016 IPR004811 RelA/SpoT family GO:0015969 RR42_RS04920 223ebca10cb2decd36cd07b247d14b9b 805 SUPERFAMILY SSF109604 94 271 1.35E-69 T 23-04-2016 RR42_RS04920 223ebca10cb2decd36cd07b247d14b9b 805 SMART SM00954 318 428 6.7E-57 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 RR42_RS04920 223ebca10cb2decd36cd07b247d14b9b 805 SUPERFAMILY SSF55021 724 800 1.68E-7 T 23-04-2016 RR42_RS04920 223ebca10cb2decd36cd07b247d14b9b 805 PANTHER PTHR21262:SF0 61 803 0.0 T 23-04-2016 RR42_RS04920 223ebca10cb2decd36cd07b247d14b9b 805 Gene3D G3DSA:3.30.70.260 723 797 5.8E-7 T 23-04-2016 RR42_RS04920 223ebca10cb2decd36cd07b247d14b9b 805 Pfam PF13328 HD domain 109 258 1.3E-50 T 23-04-2016 IPR003607 HD/PDEase domain RR42_RS04920 223ebca10cb2decd36cd07b247d14b9b 805 Pfam PF02824 TGS domain 471 530 6.9E-19 T 23-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 RR42_RS04920 223ebca10cb2decd36cd07b247d14b9b 805 PANTHER PTHR21262 61 803 0.0 T 23-04-2016 RR42_RS04920 223ebca10cb2decd36cd07b247d14b9b 805 SMART SM00471 124 236 5.8E-10 T 23-04-2016 IPR003607 HD/PDEase domain RR42_RS04920 223ebca10cb2decd36cd07b247d14b9b 805 Pfam PF04607 Region found in RelA / SpoT proteins 318 428 1.6E-32 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 RR42_RS04920 223ebca10cb2decd36cd07b247d14b9b 805 Pfam PF13291 ACT domain 720 800 1.7E-15 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RR42_RS03320 56c1fe02b8c6d801432daf61ed974c56 243 SUPERFAMILY SSF52172 5 130 1.14E-41 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS03320 56c1fe02b8c6d801432daf61ed974c56 243 Gene3D G3DSA:3.40.50.2300 4 126 6.8E-42 T 23-04-2016 RR42_RS03320 56c1fe02b8c6d801432daf61ed974c56 243 SUPERFAMILY SSF46894 135 235 4.25E-24 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS03320 56c1fe02b8c6d801432daf61ed974c56 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 233 2.6E-21 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS03320 56c1fe02b8c6d801432daf61ed974c56 243 SMART SM00862 157 233 1.2E-20 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS03320 56c1fe02b8c6d801432daf61ed974c56 243 SMART SM00448 7 118 3.0E-41 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS03320 56c1fe02b8c6d801432daf61ed974c56 243 Pfam PF00072 Response regulator receiver domain 9 119 4.6E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS03320 56c1fe02b8c6d801432daf61ed974c56 243 PANTHER PTHR26402 7 242 5.8E-86 T 23-04-2016 RR42_RS03320 56c1fe02b8c6d801432daf61ed974c56 243 Gene3D G3DSA:1.10.10.10 135 236 2.4E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS03320 56c1fe02b8c6d801432daf61ed974c56 243 PANTHER PTHR26402:SF292 7 242 5.8E-86 T 23-04-2016 RR42_RS16090 10abed305feb8f4f72408a783545ff4e 350 SUPERFAMILY SSF53383 4 338 2.1E-51 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS16090 10abed305feb8f4f72408a783545ff4e 350 PANTHER PTHR11751 9 336 3.9E-46 T 23-04-2016 RR42_RS16090 10abed305feb8f4f72408a783545ff4e 350 PANTHER PTHR11751:SF3 9 336 3.9E-46 T 23-04-2016 RR42_RS16090 10abed305feb8f4f72408a783545ff4e 350 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 7 335 1.2E-106 T 23-04-2016 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443|UniPathway: UPA00148 RR42_RS16090 10abed305feb8f4f72408a783545ff4e 350 Pfam PF00155 Aminotransferase class I and II 69 300 2.4E-23 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RR42_RS16090 10abed305feb8f4f72408a783545ff4e 350 Gene3D G3DSA:3.40.640.10 45 242 2.2E-40 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS13660 c2b7b998ecfee95f22bf7d802cbc3286 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 249 256 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RR42_RS13660 c2b7b998ecfee95f22bf7d802cbc3286 490 Gene3D G3DSA:3.40.309.10 263 452 2.6E-68 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RR42_RS13660 c2b7b998ecfee95f22bf7d802cbc3286 490 SUPERFAMILY SSF53720 5 483 4.84E-162 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RR42_RS13660 c2b7b998ecfee95f22bf7d802cbc3286 490 Pfam PF00171 Aldehyde dehydrogenase family 16 477 4.2E-169 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RR42_RS13660 c2b7b998ecfee95f22bf7d802cbc3286 490 PANTHER PTHR11699 4 489 5.9E-223 T 23-04-2016 RR42_RS13660 c2b7b998ecfee95f22bf7d802cbc3286 490 Gene3D G3DSA:3.40.605.10 7 262 2.7E-87 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RR42_RS13660 c2b7b998ecfee95f22bf7d802cbc3286 490 PANTHER PTHR11699:SF198 4 489 5.9E-223 T 23-04-2016 RR42_RS13660 c2b7b998ecfee95f22bf7d802cbc3286 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RR42_RS16235 8d7a586a5f8c80a1e04919e48deb74ce 384 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 375 2.3E-66 T 23-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 RR42_RS16235 8d7a586a5f8c80a1e04919e48deb74ce 384 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 7 380 5.8E-102 T 23-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 RR42_RS16235 8d7a586a5f8c80a1e04919e48deb74ce 384 PANTHER PTHR33529 1 379 1.3E-73 T 23-04-2016 RR42_RS16235 8d7a586a5f8c80a1e04919e48deb74ce 384 PANTHER PTHR33529:SF1 1 379 1.3E-73 T 23-04-2016 RR42_RS07640 c2ddcf99100fdf960735e3d3d586b4b2 459 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 15 459 60.302 T 23-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 RR42_RS07640 c2ddcf99100fdf960735e3d3d586b4b2 459 Gene3D G3DSA:2.40.50.140 395 459 3.2E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS07640 c2ddcf99100fdf960735e3d3d586b4b2 459 SMART SM00729 151 380 5.2E-50 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RR42_RS07640 c2ddcf99100fdf960735e3d3d586b4b2 459 SUPERFAMILY SSF102114 126 385 1.31E-49 T 23-04-2016 RR42_RS07640 c2ddcf99100fdf960735e3d3d586b4b2 459 Gene3D G3DSA:3.80.30.20 149 392 1.3E-68 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RR42_RS07640 c2ddcf99100fdf960735e3d3d586b4b2 459 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 17 457 1.2E-167 T 23-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 RR42_RS07640 c2ddcf99100fdf960735e3d3d586b4b2 459 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 17 457 4.9E-96 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 RR42_RS07640 c2ddcf99100fdf960735e3d3d586b4b2 459 Pfam PF04055 Radical SAM superfamily 157 338 3.8E-30 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RR42_RS07640 c2ddcf99100fdf960735e3d3d586b4b2 459 PANTHER PTHR11918 15 459 1.6E-214 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein RR42_RS07640 c2ddcf99100fdf960735e3d3d586b4b2 459 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 155 175 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 RR42_RS07640 c2ddcf99100fdf960735e3d3d586b4b2 459 PANTHER PTHR11918:SF57 15 459 1.6E-214 T 23-04-2016 RR42_RS07640 c2ddcf99100fdf960735e3d3d586b4b2 459 Pfam PF01938 TRAM domain 391 459 4.4E-5 T 23-04-2016 IPR002792 TRAM domain RR42_RS07640 c2ddcf99100fdf960735e3d3d586b4b2 459 Pfam PF00919 Uncharacterized protein family UPF0004 17 95 1.6E-18 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 RR42_RS12020 e86f7fe30603cd201ff5851b1bfd74ad 217 SUPERFAMILY SSF55729 16 188 1.21E-41 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS12020 e86f7fe30603cd201ff5851b1bfd74ad 217 Pfam PF13302 Acetyltransferase (GNAT) domain 23 163 7.3E-31 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RR42_RS12020 e86f7fe30603cd201ff5851b1bfd74ad 217 PANTHER PTHR13256:SF19 19 212 2.6E-51 T 23-04-2016 RR42_RS12020 e86f7fe30603cd201ff5851b1bfd74ad 217 PANTHER PTHR13256 19 212 2.6E-51 T 23-04-2016 RR42_RS12020 e86f7fe30603cd201ff5851b1bfd74ad 217 Gene3D G3DSA:3.40.630.30 13 194 4.3E-51 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS09680 b3d56347e2bcd7026bc2fc7510c6c461 294 PANTHER PTHR33420:SF10 142 294 1.8E-31 T 23-04-2016 RR42_RS09680 b3d56347e2bcd7026bc2fc7510c6c461 294 PANTHER PTHR33420:SF10 5 120 1.8E-31 T 23-04-2016 RR42_RS09680 b3d56347e2bcd7026bc2fc7510c6c461 294 Pfam PF00419 Fimbrial protein 146 294 1.6E-13 T 23-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RR42_RS09680 b3d56347e2bcd7026bc2fc7510c6c461 294 Gene3D G3DSA:2.60.40.1090 149 294 3.7E-19 T 23-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RR42_RS09680 b3d56347e2bcd7026bc2fc7510c6c461 294 SUPERFAMILY SSF49401 155 294 7.95E-22 T 23-04-2016 IPR008966 Adhesion domain RR42_RS09680 b3d56347e2bcd7026bc2fc7510c6c461 294 PANTHER PTHR33420 142 294 1.8E-31 T 23-04-2016 RR42_RS09680 b3d56347e2bcd7026bc2fc7510c6c461 294 PANTHER PTHR33420 5 120 1.8E-31 T 23-04-2016 RR42_RS14995 6a98de128f90825dacc0885daf9301c5 346 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 307 9.0E-113 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RR42_RS14995 6a98de128f90825dacc0885daf9301c5 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 2.8E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RR42_RS14995 6a98de128f90825dacc0885daf9301c5 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 2.8E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RR42_RS14995 6a98de128f90825dacc0885daf9301c5 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 264 273 2.8E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RR42_RS14995 6a98de128f90825dacc0885daf9301c5 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 2.8E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RR42_RS14995 6a98de128f90825dacc0885daf9301c5 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 2.8E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RR42_RS14995 6a98de128f90825dacc0885daf9301c5 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 2.8E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RR42_RS14995 6a98de128f90825dacc0885daf9301c5 346 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 335 62.793 T 23-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RR42_RS14995 6a98de128f90825dacc0885daf9301c5 346 PANTHER PTHR11735 1 338 8.2E-145 T 23-04-2016 RR42_RS14995 6a98de128f90825dacc0885daf9301c5 346 SUPERFAMILY SSF53067 101 310 3.56E-41 T 23-04-2016 RR42_RS14995 6a98de128f90825dacc0885daf9301c5 346 Pfam PF00814 Glycoprotease family 24 308 4.1E-96 T 23-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RR42_RS14995 6a98de128f90825dacc0885daf9301c5 346 SUPERFAMILY SSF53067 3 122 4.08E-29 T 23-04-2016 RR42_RS14995 6a98de128f90825dacc0885daf9301c5 346 PANTHER PTHR11735:SF6 1 338 8.2E-145 T 23-04-2016 RR42_RS14995 6a98de128f90825dacc0885daf9301c5 346 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 314 6.3E-130 T 23-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RR42_RS14995 6a98de128f90825dacc0885daf9301c5 346 Gene3D G3DSA:3.30.420.40 1 159 3.3E-47 T 23-04-2016 RR42_RS11890 55292e7b1621bdbb02523cb0b346aaf7 631 Gene3D G3DSA:3.10.290.10 379 437 3.0E-15 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RR42_RS11890 55292e7b1621bdbb02523cb0b346aaf7 631 PANTHER PTHR21600:SF25 379 625 1.2E-69 T 23-04-2016 RR42_RS11890 55292e7b1621bdbb02523cb0b346aaf7 631 PANTHER PTHR21600 379 625 1.2E-69 T 23-04-2016 RR42_RS11890 55292e7b1621bdbb02523cb0b346aaf7 631 SMART SM00363 379 444 1.0E-4 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RR42_RS11890 55292e7b1621bdbb02523cb0b346aaf7 631 Pfam PF00849 RNA pseudouridylate synthase 441 596 4.1E-11 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS11890 55292e7b1621bdbb02523cb0b346aaf7 631 Pfam PF01479 S4 domain 379 423 3.4E-7 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RR42_RS11890 55292e7b1621bdbb02523cb0b346aaf7 631 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 483 625 5.5E-33 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RR42_RS11890 55292e7b1621bdbb02523cb0b346aaf7 631 SUPERFAMILY SSF55120 440 628 4.96E-32 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS11890 55292e7b1621bdbb02523cb0b346aaf7 631 SUPERFAMILY SSF55174 379 470 9.94E-15 T 23-04-2016 RR42_RS20110 4143dda369fde50121f0f5d4e78a1810 637 SUPERFAMILY SSF48452 7 156 7.59E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS20110 4143dda369fde50121f0f5d4e78a1810 637 SUPERFAMILY SSF48452 201 250 7.59E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS20110 4143dda369fde50121f0f5d4e78a1810 637 SUPERFAMILY SSF48452 503 604 2.43E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS20110 4143dda369fde50121f0f5d4e78a1810 637 Gene3D G3DSA:1.25.40.10 345 405 3.2E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS20110 4143dda369fde50121f0f5d4e78a1810 637 Gene3D G3DSA:1.25.40.10 8 282 3.6E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS20110 4143dda369fde50121f0f5d4e78a1810 637 Gene3D G3DSA:1.25.40.10 503 604 3.2E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS20110 4143dda369fde50121f0f5d4e78a1810 637 Pfam PF13432 Tetratricopeptide repeat 8 72 1.3E-4 T 23-04-2016 RR42_RS20110 4143dda369fde50121f0f5d4e78a1810 637 Pfam PF13432 Tetratricopeptide repeat 90 150 5.3E-5 T 23-04-2016 RR42_RS15805 cc320f7aa0e493cf39bedc0cc96dff57 382 SUPERFAMILY SSF53383 2 380 7.56E-110 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS15805 cc320f7aa0e493cf39bedc0cc96dff57 382 Gene3D G3DSA:3.90.1150.10 260 381 2.1E-36 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS15805 cc320f7aa0e493cf39bedc0cc96dff57 382 PANTHER PTHR30244:SF3 1 378 1.1E-138 T 23-04-2016 RR42_RS15805 cc320f7aa0e493cf39bedc0cc96dff57 382 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 1 379 1.5E-165 T 23-04-2016 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase RR42_RS15805 cc320f7aa0e493cf39bedc0cc96dff57 382 PIRSF PIRSF000390 1 382 9.7E-107 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RR42_RS15805 cc320f7aa0e493cf39bedc0cc96dff57 382 PANTHER PTHR30244 1 378 1.1E-138 T 23-04-2016 RR42_RS15805 cc320f7aa0e493cf39bedc0cc96dff57 382 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 9 377 1.8E-110 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RR42_RS15805 cc320f7aa0e493cf39bedc0cc96dff57 382 Gene3D G3DSA:3.40.640.10 1 258 1.8E-80 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS16385 16a437604497130ca1a5323b663c1d63 223 PANTHER PTHR30614 1 223 2.5E-63 T 23-04-2016 RR42_RS16385 16a437604497130ca1a5323b663c1d63 223 SUPERFAMILY SSF161098 19 206 1.11E-41 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS16385 16a437604497130ca1a5323b663c1d63 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 218 1.2E-22 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS16385 16a437604497130ca1a5323b663c1d63 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 18 115 6.0E-25 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RR42_RS16385 16a437604497130ca1a5323b663c1d63 223 Gene3D G3DSA:1.10.3720.10 18 218 6.6E-43 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS14825 457f86c027b6876c85d2cdf0e4c2ba22 601 Pfam PF01145 SPFH domain / Band 7 family 44 184 4.5E-18 T 23-04-2016 IPR001107 Band 7 domain RR42_RS14825 457f86c027b6876c85d2cdf0e4c2ba22 601 SUPERFAMILY SSF117892 57 200 6.67E-22 T 23-04-2016 IPR001107 Band 7 domain RR42_RS14825 457f86c027b6876c85d2cdf0e4c2ba22 601 PANTHER PTHR13806 1 315 3.5E-202 T 23-04-2016 IPR027705 Flotillin family RR42_RS14825 457f86c027b6876c85d2cdf0e4c2ba22 601 PANTHER PTHR13806 333 551 3.5E-202 T 23-04-2016 IPR027705 Flotillin family RR42_RS14825 457f86c027b6876c85d2cdf0e4c2ba22 601 SMART SM00244 26 195 9.4E-16 T 23-04-2016 IPR001107 Band 7 domain RR42_RS14825 457f86c027b6876c85d2cdf0e4c2ba22 601 Pfam PF15975 Flotillin 413 542 4.3E-37 T 23-04-2016 IPR031905 Flotillin, C-terminal domain RR42_RS14825 457f86c027b6876c85d2cdf0e4c2ba22 601 PANTHER PTHR13806:SF2 1 315 3.5E-202 T 23-04-2016 RR42_RS14825 457f86c027b6876c85d2cdf0e4c2ba22 601 PANTHER PTHR13806:SF2 333 551 3.5E-202 T 23-04-2016 RR42_RS01085 74a98e6917fc46226a3532ebd2995a38 207 Pfam PF00072 Response regulator receiver domain 24 142 5.3E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS01085 74a98e6917fc46226a3532ebd2995a38 207 SUPERFAMILY SSF52172 24 191 1.42E-27 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS01085 74a98e6917fc46226a3532ebd2995a38 207 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 186 206 4.6E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS01085 74a98e6917fc46226a3532ebd2995a38 207 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 169 186 4.6E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS01085 74a98e6917fc46226a3532ebd2995a38 207 Pfam PF02954 Bacterial regulatory protein, Fis family 163 202 1.1E-10 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS01085 74a98e6917fc46226a3532ebd2995a38 207 Gene3D G3DSA:1.10.10.60 154 205 4.5E-27 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS01085 74a98e6917fc46226a3532ebd2995a38 207 PANTHER PTHR26402:SF344 21 142 3.4E-35 T 23-04-2016 RR42_RS01085 74a98e6917fc46226a3532ebd2995a38 207 PANTHER PTHR26402 21 142 3.4E-35 T 23-04-2016 RR42_RS01085 74a98e6917fc46226a3532ebd2995a38 207 Gene3D G3DSA:3.40.50.2300 24 153 7.4E-29 T 23-04-2016 RR42_RS01085 74a98e6917fc46226a3532ebd2995a38 207 SMART SM00448 21 142 2.3E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS14630 79d7d7d9cefb56d86c68d8568454d650 435 ProSitePatterns PS00216 Sugar transport proteins signature 1. 301 317 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RR42_RS14630 79d7d7d9cefb56d86c68d8568454d650 435 Pfam PF07690 Major Facilitator Superfamily 63 385 1.1E-23 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS14630 79d7d7d9cefb56d86c68d8568454d650 435 Gene3D G3DSA:1.20.1250.20 25 226 2.5E-27 T 23-04-2016 RR42_RS14630 79d7d7d9cefb56d86c68d8568454d650 435 Gene3D G3DSA:1.20.1250.20 245 430 9.2E-21 T 23-04-2016 RR42_RS14630 79d7d7d9cefb56d86c68d8568454d650 435 ProSitePatterns PS00216 Sugar transport proteins signature 1. 86 102 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RR42_RS14630 79d7d7d9cefb56d86c68d8568454d650 435 ProSitePatterns PS00217 Sugar transport proteins signature 2. 136 161 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RR42_RS14630 79d7d7d9cefb56d86c68d8568454d650 435 PANTHER PTHR23508 16 429 3.1E-119 T 23-04-2016 RR42_RS14630 79d7d7d9cefb56d86c68d8568454d650 435 SUPERFAMILY SSF103473 25 433 5.75E-61 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS14630 79d7d7d9cefb56d86c68d8568454d650 435 PANTHER PTHR23508:SF13 16 429 3.1E-119 T 23-04-2016 RR42_RS35925 198fa57669a9c6db787daeb18f967f6d 227 PANTHER PTHR18901:SF34 7 201 5.9E-52 T 23-04-2016 RR42_RS35925 198fa57669a9c6db787daeb18f967f6d 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 20 199 1.9E-25 T 23-04-2016 IPR023214 HAD-like domain RR42_RS35925 198fa57669a9c6db787daeb18f967f6d 227 Gene3D G3DSA:3.40.50.1000 103 202 8.9E-43 T 23-04-2016 IPR023214 HAD-like domain RR42_RS35925 198fa57669a9c6db787daeb18f967f6d 227 Gene3D G3DSA:3.40.50.1000 8 30 8.9E-43 T 23-04-2016 IPR023214 HAD-like domain RR42_RS35925 198fa57669a9c6db787daeb18f967f6d 227 PANTHER PTHR18901 7 201 5.9E-52 T 23-04-2016 RR42_RS35925 198fa57669a9c6db787daeb18f967f6d 227 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 101 199 9.6E-15 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS35925 198fa57669a9c6db787daeb18f967f6d 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 16 27 2.1E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS35925 198fa57669a9c6db787daeb18f967f6d 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 112 125 2.1E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS35925 198fa57669a9c6db787daeb18f967f6d 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 161 181 2.1E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS35925 198fa57669a9c6db787daeb18f967f6d 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 159 2.1E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS35925 198fa57669a9c6db787daeb18f967f6d 227 SUPERFAMILY SSF56784 15 225 1.93E-45 T 23-04-2016 IPR023214 HAD-like domain RR42_RS00880 1ff03d0d1092bcdab1fb3b0de2d8f7e2 223 Gene3D G3DSA:3.40.1050.10 3 203 3.4E-75 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RR42_RS00880 1ff03d0d1092bcdab1fb3b0de2d8f7e2 223 SMART SM00947 31 194 8.5E-68 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RR42_RS00880 1ff03d0d1092bcdab1fb3b0de2d8f7e2 223 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 43 50 - T 23-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RR42_RS00880 1ff03d0d1092bcdab1fb3b0de2d8f7e2 223 PANTHER PTHR11002 1 209 3.9E-107 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RR42_RS00880 1ff03d0d1092bcdab1fb3b0de2d8f7e2 223 Pfam PF00484 Carbonic anhydrase 38 189 1.3E-50 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RR42_RS00880 1ff03d0d1092bcdab1fb3b0de2d8f7e2 223 PANTHER PTHR11002:SF20 1 209 3.9E-107 T 23-04-2016 RR42_RS00880 1ff03d0d1092bcdab1fb3b0de2d8f7e2 223 SUPERFAMILY SSF53056 2 203 6.67E-73 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RR42_RS12865 83e60a9bbe3afb9d1485ad842c28b4f0 358 SUPERFAMILY SSF46785 1 80 1.32E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS12865 83e60a9bbe3afb9d1485ad842c28b4f0 358 Gene3D G3DSA:1.10.10.10 82 158 2.4E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS12865 83e60a9bbe3afb9d1485ad842c28b4f0 358 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 11 171 1.0E-33 T 23-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 RR42_RS12865 83e60a9bbe3afb9d1485ad842c28b4f0 358 Pfam PF04079 Segregation and condensation complex subunit ScpB 10 167 6.5E-49 T 23-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 RR42_RS12865 83e60a9bbe3afb9d1485ad842c28b4f0 358 PANTHER PTHR34298 1 211 5.6E-61 T 23-04-2016 RR42_RS12865 83e60a9bbe3afb9d1485ad842c28b4f0 358 PANTHER PTHR34298:SF2 1 211 5.6E-61 T 23-04-2016 RR42_RS12865 83e60a9bbe3afb9d1485ad842c28b4f0 358 Gene3D G3DSA:1.10.10.10 1 79 6.4E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS12865 83e60a9bbe3afb9d1485ad842c28b4f0 358 SUPERFAMILY SSF46785 83 158 2.93E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS09140 61b6aa6e78af5bf18e56d51d1f2538c0 1348 SUPERFAMILY SSF82697 4 160 1.41E-42 T 23-04-2016 RR42_RS09140 61b6aa6e78af5bf18e56d51d1f2538c0 1348 Pfam PF02769 AIR synthase related protein, C-terminal domain 860 1013 1.5E-12 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RR42_RS09140 61b6aa6e78af5bf18e56d51d1f2538c0 1348 Pfam PF02769 AIR synthase related protein, C-terminal domain 454 611 5.4E-27 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RR42_RS09140 61b6aa6e78af5bf18e56d51d1f2538c0 1348 SUPERFAMILY SSF55326 647 843 2.04E-67 T 23-04-2016 RR42_RS09140 61b6aa6e78af5bf18e56d51d1f2538c0 1348 SMART SM01211 1092 1347 7.6E-148 T 23-04-2016 RR42_RS09140 61b6aa6e78af5bf18e56d51d1f2538c0 1348 SUPERFAMILY SSF56042 852 1085 1.64E-51 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RR42_RS09140 61b6aa6e78af5bf18e56d51d1f2538c0 1348 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 8 1347 0.0 T 23-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RR42_RS09140 61b6aa6e78af5bf18e56d51d1f2538c0 1348 PANTHER PTHR10099 3 362 0.0 T 23-04-2016 RR42_RS09140 61b6aa6e78af5bf18e56d51d1f2538c0 1348 PANTHER PTHR10099 380 941 0.0 T 23-04-2016 RR42_RS09140 61b6aa6e78af5bf18e56d51d1f2538c0 1348 PANTHER PTHR10099 967 1348 0.0 T 23-04-2016 RR42_RS09140 61b6aa6e78af5bf18e56d51d1f2538c0 1348 SUPERFAMILY SSF109736 172 228 1.57E-20 T 23-04-2016 RR42_RS09140 61b6aa6e78af5bf18e56d51d1f2538c0 1348 SUPERFAMILY SSF56042 453 682 2.09E-51 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RR42_RS09140 61b6aa6e78af5bf18e56d51d1f2538c0 1348 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1092 1347 3.3E-102 T 23-04-2016 RR42_RS09140 61b6aa6e78af5bf18e56d51d1f2538c0 1348 SUPERFAMILY SSF52317 1089 1347 2.5E-90 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RR42_RS09140 61b6aa6e78af5bf18e56d51d1f2538c0 1348 SUPERFAMILY SSF55326 229 449 4.19E-56 T 23-04-2016 RR42_RS09140 61b6aa6e78af5bf18e56d51d1f2538c0 1348 Gene3D G3DSA:3.40.50.880 1093 1318 4.5E-12 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RR42_RS09140 61b6aa6e78af5bf18e56d51d1f2538c0 1348 Gene3D G3DSA:3.30.1330.10 672 837 2.3E-15 T 23-04-2016 IPR016188 PurM-like, N-terminal domain RR42_RS09140 61b6aa6e78af5bf18e56d51d1f2538c0 1348 Gene3D G3DSA:3.30.1330.10 219 443 6.1E-38 T 23-04-2016 IPR016188 PurM-like, N-terminal domain RR42_RS09140 61b6aa6e78af5bf18e56d51d1f2538c0 1348 PANTHER PTHR10099:SF5 3 362 0.0 T 23-04-2016 RR42_RS09140 61b6aa6e78af5bf18e56d51d1f2538c0 1348 PANTHER PTHR10099:SF5 380 941 0.0 T 23-04-2016 RR42_RS09140 61b6aa6e78af5bf18e56d51d1f2538c0 1348 PANTHER PTHR10099:SF5 967 1348 0.0 T 23-04-2016 RR42_RS09140 61b6aa6e78af5bf18e56d51d1f2538c0 1348 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 4 1348 21.146 T 23-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RR42_RS13095 534e5e7e49d0aeee69e3fc0600a33f02 387 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 13 317 5.5E-88 T 23-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 RR42_RS13095 534e5e7e49d0aeee69e3fc0600a33f02 387 SUPERFAMILY SSF55681 5 316 1.92E-60 T 23-04-2016 RR42_RS13095 534e5e7e49d0aeee69e3fc0600a33f02 387 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 17 365 35.791 T 23-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 RR42_RS13095 534e5e7e49d0aeee69e3fc0600a33f02 387 PANTHER PTHR11476:SF5 13 317 4.4E-51 T 23-04-2016 RR42_RS13095 534e5e7e49d0aeee69e3fc0600a33f02 387 PANTHER PTHR11476 13 317 4.4E-51 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 RR42_RS13095 534e5e7e49d0aeee69e3fc0600a33f02 387 Pfam PF13393 Histidyl-tRNA synthetase 11 314 4.0E-121 T 23-04-2016 RR42_RS13095 534e5e7e49d0aeee69e3fc0600a33f02 387 Gene3D G3DSA:3.30.930.10 18 314 4.8E-68 T 23-04-2016 RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 SUPERFAMILY SSF82693 720 765 6.28E-7 T 23-04-2016 RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 SUPERFAMILY SSF82693 852 898 6.28E-7 T 23-04-2016 RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 Gene3D G3DSA:3.30.2090.10 183 250 4.6E-13 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 Gene3D G3DSA:3.30.2090.10 315 328 4.6E-13 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 Gene3D G3DSA:3.30.2090.10 768 849 4.1E-17 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 SUPERFAMILY SSF82693 40 134 5.06E-22 T 23-04-2016 RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 Gene3D G3DSA:3.30.70.1430 40 142 2.4E-28 T 23-04-2016 RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 PANTHER PTHR32063 312 1088 0.0 T 23-04-2016 RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 PANTHER PTHR32063 1 248 0.0 T 23-04-2016 RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 Pfam PF00873 AcrB/AcrD/AcrF family 316 1072 1.9E-260 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 Pfam PF00873 AcrB/AcrD/AcrF family 4 249 1.3E-71 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 SUPERFAMILY SSF82714 767 848 4.84E-17 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 SUPERFAMILY SSF82714 183 250 4.45E-11 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 Gene3D G3DSA:1.10.3850.10 858 1075 1.1E-53 T 23-04-2016 RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 Gene3D G3DSA:1.10.3850.10 339 555 2.6E-57 T 23-04-2016 RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 PANTHER PTHR32063:SF34 312 1088 0.0 T 23-04-2016 RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 PANTHER PTHR32063:SF34 1 248 0.0 T 23-04-2016 RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 SUPERFAMILY SSF82866 875 1073 6.41E-42 T 23-04-2016 RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 SUPERFAMILY SSF82866 354 554 1.22E-47 T 23-04-2016 RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 SUPERFAMILY SSF82693 136 182 3.92E-21 T 23-04-2016 RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 SUPERFAMILY SSF82693 332 388 3.92E-21 T 23-04-2016 RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 PRINTS PR00702 Acriflavin resistance protein family signature 670 684 2.2E-24 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.2E-24 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.2E-24 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 PRINTS PR00702 Acriflavin resistance protein family signature 607 624 2.2E-24 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 SUPERFAMILY SSF82693 620 714 1.36E-14 T 23-04-2016 RR42_RS03305 fdfe152451adf005c37e999f8c24e55b 1098 Gene3D G3DSA:3.30.70.1430 623 711 7.0E-11 T 23-04-2016 RR42_RS20805 f2aca17c04be75b1c18fce6e097405d8 484 Pfam PF10396 GTP-binding protein TrmE N-terminus 16 133 4.5E-38 T 23-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal RR42_RS20805 f2aca17c04be75b1c18fce6e097405d8 484 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 231 396 5.7E-21 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RR42_RS20805 f2aca17c04be75b1c18fce6e097405d8 484 Gene3D G3DSA:3.40.50.300 300 403 1.3E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20805 f2aca17c04be75b1c18fce6e097405d8 484 PANTHER PTHR11649:SF56 18 484 1.1E-156 T 23-04-2016 RR42_RS20805 f2aca17c04be75b1c18fce6e097405d8 484 Gene3D G3DSA:1.20.120.430 135 195 7.0E-56 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 RR42_RS20805 f2aca17c04be75b1c18fce6e097405d8 484 Gene3D G3DSA:1.20.120.430 261 284 7.0E-56 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 RR42_RS20805 f2aca17c04be75b1c18fce6e097405d8 484 Gene3D G3DSA:1.20.120.430 413 484 7.0E-56 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 RR42_RS20805 f2aca17c04be75b1c18fce6e097405d8 484 Pfam PF01926 50S ribosome-binding GTPase 232 354 4.9E-25 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RR42_RS20805 f2aca17c04be75b1c18fce6e097405d8 484 Gene3D G3DSA:3.40.50.300 228 260 1.4E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20805 f2aca17c04be75b1c18fce6e097405d8 484 SUPERFAMILY SSF52540 81 183 8.5E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20805 f2aca17c04be75b1c18fce6e097405d8 484 SUPERFAMILY SSF52540 217 399 8.5E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20805 f2aca17c04be75b1c18fce6e097405d8 484 SUPERFAMILY SSF116878 408 484 3.14E-48 T 23-04-2016 RR42_RS20805 f2aca17c04be75b1c18fce6e097405d8 484 SUPERFAMILY SSF116878 134 233 3.14E-48 T 23-04-2016 RR42_RS20805 f2aca17c04be75b1c18fce6e097405d8 484 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 232 252 1.1E-5 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RR42_RS20805 f2aca17c04be75b1c18fce6e097405d8 484 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 281 296 1.1E-5 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RR42_RS20805 f2aca17c04be75b1c18fce6e097405d8 484 Gene3D G3DSA:3.30.1360.120 12 134 3.0E-43 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RR42_RS20805 f2aca17c04be75b1c18fce6e097405d8 484 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 21 484 1.2E-99 T 23-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 RR42_RS20805 f2aca17c04be75b1c18fce6e097405d8 484 Pfam PF12631 MnmE helical domain 136 481 9.6E-56 T 23-04-2016 IPR025867 MnmE, helical domain RR42_RS20805 f2aca17c04be75b1c18fce6e097405d8 484 PANTHER PTHR11649 18 484 1.1E-156 T 23-04-2016 RR42_RS20805 f2aca17c04be75b1c18fce6e097405d8 484 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 15 484 32.428 T 23-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 RR42_RS11015 59cd97dc6cf0011e7204dfcab1ae0d48 93 Pfam PF13744 Helix-turn-helix domain 14 90 8.9E-26 T 23-04-2016 RR42_RS11015 59cd97dc6cf0011e7204dfcab1ae0d48 93 SMART SM00530 33 89 7.9E-5 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RR42_RS11015 59cd97dc6cf0011e7204dfcab1ae0d48 93 Gene3D G3DSA:1.10.260.40 20 83 1.1E-24 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS11015 59cd97dc6cf0011e7204dfcab1ae0d48 93 SUPERFAMILY SSF47413 20 91 1.41E-18 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS13675 3235a90f898ce944426e167a5d56bc0d 267 Gene3D G3DSA:3.40.50.720 2 264 3.5E-71 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS13675 3235a90f898ce944426e167a5d56bc0d 267 SUPERFAMILY SSF51735 2 266 1.82E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS13675 3235a90f898ce944426e167a5d56bc0d 267 PANTHER PTHR24322 159 190 6.2E-59 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13675 3235a90f898ce944426e167a5d56bc0d 267 PANTHER PTHR24322 13 143 6.2E-59 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13675 3235a90f898ce944426e167a5d56bc0d 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 3.4E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13675 3235a90f898ce944426e167a5d56bc0d 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 3.4E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13675 3235a90f898ce944426e167a5d56bc0d 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 3.4E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13675 3235a90f898ce944426e167a5d56bc0d 267 Pfam PF00106 short chain dehydrogenase 9 200 5.1E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13675 3235a90f898ce944426e167a5d56bc0d 267 PANTHER PTHR24322:SF602 159 190 6.2E-59 T 23-04-2016 RR42_RS13675 3235a90f898ce944426e167a5d56bc0d 267 PANTHER PTHR24322:SF602 13 143 6.2E-59 T 23-04-2016 RR42_RS13675 3235a90f898ce944426e167a5d56bc0d 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.1E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13675 3235a90f898ce944426e167a5d56bc0d 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.1E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13675 3235a90f898ce944426e167a5d56bc0d 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.1E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13675 3235a90f898ce944426e167a5d56bc0d 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.1E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13675 3235a90f898ce944426e167a5d56bc0d 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.1E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13675 3235a90f898ce944426e167a5d56bc0d 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 227 247 1.1E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS18000 eae5b22ce5b6e73a0d5250d1ab04321e 252 Pfam PF07072 Protein of unknown function (DUF1342) 16 226 1.6E-80 T 23-04-2016 IPR009777 Cell division protein ZapD RR42_RS18000 eae5b22ce5b6e73a0d5250d1ab04321e 252 Gene3D G3DSA:2.60.440.10 173 250 1.0E-16 T 23-04-2016 IPR027462 Z ring-associated protein D, C-terminal domain RR42_RS18000 eae5b22ce5b6e73a0d5250d1ab04321e 252 SUPERFAMILY SSF160950 2 250 9.94E-86 T 23-04-2016 RR42_RS18000 eae5b22ce5b6e73a0d5250d1ab04321e 252 Hamap MF_01092 Cell division protein ZapD [zapD]. 1 250 32.929 T 23-04-2016 IPR009777 Cell division protein ZapD RR42_RS18000 eae5b22ce5b6e73a0d5250d1ab04321e 252 PANTHER PTHR39455 2 251 4.6E-55 T 23-04-2016 RR42_RS18000 eae5b22ce5b6e73a0d5250d1ab04321e 252 Gene3D G3DSA:1.10.3900.10 10 172 7.5E-67 T 23-04-2016 RR42_RS18000 eae5b22ce5b6e73a0d5250d1ab04321e 252 PANTHER PTHR39455:SF1 2 251 4.6E-55 T 23-04-2016 RR42_RS13545 7fe1417e270805ed35f45171ad8ae35c 283 Pfam PF00378 Enoyl-CoA hydratase/isomerase 32 282 1.9E-40 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RR42_RS13545 7fe1417e270805ed35f45171ad8ae35c 283 PANTHER PTHR11941 8 280 1.5E-129 T 23-04-2016 RR42_RS13545 7fe1417e270805ed35f45171ad8ae35c 283 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 23-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RR42_RS13545 7fe1417e270805ed35f45171ad8ae35c 283 Gene3D G3DSA:3.90.226.10 26 224 3.9E-53 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS13545 7fe1417e270805ed35f45171ad8ae35c 283 Gene3D G3DSA:1.10.12.10 225 283 5.6E-17 T 23-04-2016 IPR014748 Crontonase, C-terminal RR42_RS13545 7fe1417e270805ed35f45171ad8ae35c 283 SUPERFAMILY SSF52096 20 282 1.42E-71 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS13545 7fe1417e270805ed35f45171ad8ae35c 283 PANTHER PTHR11941:SF90 8 280 1.5E-129 T 23-04-2016 RR42_RS18485 761c4015348d3464e85538d824c6e1b3 103 SUPERFAMILY SSF52833 1 102 1.86E-34 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS18485 761c4015348d3464e85538d824c6e1b3 103 PIRSF PIRSF005894 1 103 3.4E-48 T 23-04-2016 IPR014434 Monothiol glutaredoxin RR42_RS18485 761c4015348d3464e85538d824c6e1b3 103 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 102 2.3E-45 T 23-04-2016 IPR004480 Monothiol glutaredoxin-related RR42_RS18485 761c4015348d3464e85538d824c6e1b3 103 PANTHER PTHR10293 2 102 2.4E-64 T 23-04-2016 IPR004480 Monothiol glutaredoxin-related RR42_RS18485 761c4015348d3464e85538d824c6e1b3 103 Gene3D G3DSA:3.40.30.10 8 102 2.5E-34 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS18485 761c4015348d3464e85538d824c6e1b3 103 Pfam PF00462 Glutaredoxin 17 82 8.9E-19 T 23-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 RR42_RS05645 e80ad6976d60415118bbef26f21e9ece 282 Gene3D G3DSA:3.40.50.300 33 277 6.5E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05645 e80ad6976d60415118bbef26f21e9ece 282 PANTHER PTHR24220 36 282 1.6E-112 T 23-04-2016 RR42_RS05645 e80ad6976d60415118bbef26f21e9ece 282 PANTHER PTHR24220:SF366 36 282 1.6E-112 T 23-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD RR42_RS05645 e80ad6976d60415118bbef26f21e9ece 282 ProSitePatterns PS00211 ABC transporters family signature. 181 195 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS05645 e80ad6976d60415118bbef26f21e9ece 282 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 260 281 1.7E-5 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RR42_RS05645 e80ad6976d60415118bbef26f21e9ece 282 SUPERFAMILY SSF52540 33 279 3.63E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05645 e80ad6976d60415118bbef26f21e9ece 282 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 34 282 3.0E-106 T 23-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD RR42_RS05645 e80ad6976d60415118bbef26f21e9ece 282 Pfam PF00005 ABC transporter 50 209 3.4E-26 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS02750 075bbb3d81e58e4cba1321e070cf2d8b 246 Pfam PF00483 Nucleotidyl transferase 2 130 2.8E-22 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 RR42_RS02750 075bbb3d81e58e4cba1321e070cf2d8b 246 PANTHER PTHR22572:SF15 2 121 8.0E-39 T 23-04-2016 RR42_RS02750 075bbb3d81e58e4cba1321e070cf2d8b 246 Gene3D G3DSA:3.90.550.10 2 236 9.3E-47 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RR42_RS02750 075bbb3d81e58e4cba1321e070cf2d8b 246 PANTHER PTHR22572 2 121 8.0E-39 T 23-04-2016 RR42_RS02750 075bbb3d81e58e4cba1321e070cf2d8b 246 SUPERFAMILY SSF53448 2 234 8.11E-52 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RR42_RS34845 cf0b5e0eeb0d30cb5a5da377aa535eae 340 Gene3D G3DSA:3.40.50.620 118 139 4.3E-30 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS34845 cf0b5e0eeb0d30cb5a5da377aa535eae 340 Gene3D G3DSA:3.40.50.620 4 80 4.3E-30 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS34845 cf0b5e0eeb0d30cb5a5da377aa535eae 340 Gene3D G3DSA:1.10.730.10 140 337 7.1E-62 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS34845 cf0b5e0eeb0d30cb5a5da377aa535eae 340 PANTHER PTHR11946 117 339 1.8E-126 T 23-04-2016 RR42_RS34845 cf0b5e0eeb0d30cb5a5da377aa535eae 340 PANTHER PTHR11946:SF5 117 339 1.8E-126 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RR42_RS34845 cf0b5e0eeb0d30cb5a5da377aa535eae 340 PANTHER PTHR11946:SF5 2 79 1.8E-126 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RR42_RS34845 cf0b5e0eeb0d30cb5a5da377aa535eae 340 PANTHER PTHR11946 2 79 1.8E-126 T 23-04-2016 RR42_RS34845 cf0b5e0eeb0d30cb5a5da377aa535eae 340 SUPERFAMILY SSF47323 151 339 4.67E-52 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS34845 cf0b5e0eeb0d30cb5a5da377aa535eae 340 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 2 140 4.3E-33 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS34845 cf0b5e0eeb0d30cb5a5da377aa535eae 340 Pfam PF08264 Anticodon-binding domain of tRNA 191 339 1.1E-40 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RR42_RS34845 cf0b5e0eeb0d30cb5a5da377aa535eae 340 SUPERFAMILY SSF52374 2 80 1.2E-31 T 23-04-2016 RR42_RS34845 cf0b5e0eeb0d30cb5a5da377aa535eae 340 SUPERFAMILY SSF52374 118 150 1.2E-31 T 23-04-2016 RR42_RS08960 c8b8431638e059011c830454edf66199 143 Gene3D G3DSA:3.40.630.30 9 141 2.9E-22 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS08960 c8b8431638e059011c830454edf66199 143 SUPERFAMILY SSF55729 8 134 7.93E-22 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS08960 c8b8431638e059011c830454edf66199 143 Pfam PF13673 Acetyltransferase (GNAT) domain 41 133 1.3E-15 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RR42_RS04670 7e07010be2fc07f0414d8e4211aca600 589 Pfam PF00664 ABC transporter transmembrane region 32 302 4.8E-43 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RR42_RS04670 7e07010be2fc07f0414d8e4211aca600 589 SMART SM00382 372 561 6.1E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS04670 7e07010be2fc07f0414d8e4211aca600 589 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 17 587 1.0E-247 T 23-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 RR42_RS04670 7e07010be2fc07f0414d8e4211aca600 589 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS04670 7e07010be2fc07f0414d8e4211aca600 589 SUPERFAMILY SSF52540 335 586 1.13E-89 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04670 7e07010be2fc07f0414d8e4211aca600 589 PANTHER PTHR24221 4 586 6.0E-213 T 23-04-2016 RR42_RS04670 7e07010be2fc07f0414d8e4211aca600 589 Pfam PF00005 ABC transporter 363 515 3.0E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS04670 7e07010be2fc07f0414d8e4211aca600 589 SUPERFAMILY SSF90123 13 332 4.19E-68 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RR42_RS04670 7e07010be2fc07f0414d8e4211aca600 589 Gene3D G3DSA:1.20.1560.10 18 332 2.4E-66 T 23-04-2016 RR42_RS04670 7e07010be2fc07f0414d8e4211aca600 589 Gene3D G3DSA:3.40.50.300 346 578 4.6E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05650 574c5bbe7da26736fba465446ea9c658 230 SUPERFAMILY SSF52540 2 218 1.74E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05650 574c5bbe7da26736fba465446ea9c658 230 SMART SM00382 26 209 7.7E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS05650 574c5bbe7da26736fba465446ea9c658 230 Gene3D G3DSA:3.40.50.300 1 220 4.3E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05650 574c5bbe7da26736fba465446ea9c658 230 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 230 1.6E-103 T 23-04-2016 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE RR42_RS05650 574c5bbe7da26736fba465446ea9c658 230 PANTHER PTHR24220 3 230 9.6E-126 T 23-04-2016 RR42_RS05650 574c5bbe7da26736fba465446ea9c658 230 PANTHER PTHR24220:SF404 3 230 9.6E-126 T 23-04-2016 RR42_RS05650 574c5bbe7da26736fba465446ea9c658 230 Pfam PF00005 ABC transporter 17 159 2.7E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS20125 9651cd104d39315c483883dd38d2a2ca 1333 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 152 263 4.2E-45 T 23-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RR42_RS20125 9651cd104d39315c483883dd38d2a2ca 1333 Pfam PF01619 Proline dehydrogenase 274 573 3.2E-96 T 23-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 RR42_RS20125 9651cd104d39315c483883dd38d2a2ca 1333 SUPERFAMILY SSF51730 266 621 1.29E-120 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like RR42_RS20125 9651cd104d39315c483883dd38d2a2ca 1333 Gene3D G3DSA:3.20.20.220 265 621 3.0E-117 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like RR42_RS20125 9651cd104d39315c483883dd38d2a2ca 1333 Gene3D G3DSA:3.40.309.10 906 1097 1.0E-46 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RR42_RS20125 9651cd104d39315c483883dd38d2a2ca 1333 PANTHER PTHR11699 670 1119 3.6E-180 T 23-04-2016 RR42_RS20125 9651cd104d39315c483883dd38d2a2ca 1333 SUPERFAMILY SSF47598 3 45 1.22E-9 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RR42_RS20125 9651cd104d39315c483883dd38d2a2ca 1333 Gene3D G3DSA:1.10.2060.10 148 264 5.9E-53 T 23-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RR42_RS20125 9651cd104d39315c483883dd38d2a2ca 1333 PANTHER PTHR11699:SF18 670 1119 3.6E-180 T 23-04-2016 RR42_RS20125 9651cd104d39315c483883dd38d2a2ca 1333 SUPERFAMILY SSF53720 667 1118 5.89E-130 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RR42_RS20125 9651cd104d39315c483883dd38d2a2ca 1333 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 918 929 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RR42_RS20125 9651cd104d39315c483883dd38d2a2ca 1333 Pfam PF00171 Aldehyde dehydrogenase family 668 1117 1.4E-118 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RR42_RS20125 9651cd104d39315c483883dd38d2a2ca 1333 PIRSF PIRSF000197 78 1333 0.0 T 23-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RR42_RS20125 9651cd104d39315c483883dd38d2a2ca 1333 SUPERFAMILY SSF81935 92 265 3.92E-65 T 23-04-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RR42_RS20125 9651cd104d39315c483883dd38d2a2ca 1333 Gene3D G3DSA:1.20.5.550 91 142 1.4E-21 T 23-04-2016 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RR42_RS20125 9651cd104d39315c483883dd38d2a2ca 1333 Gene3D G3DSA:3.40.605.10 669 905 2.9E-69 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RR42_RS20125 9651cd104d39315c483883dd38d2a2ca 1333 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 615 1119 1.2E-245 T 23-04-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RR42_RS19640 8f3003ef578db5789f313cea0c8e79aa 329 Gene3D G3DSA:1.10.443.10 163 324 1.4E-32 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RR42_RS19640 8f3003ef578db5789f313cea0c8e79aa 329 Pfam PF00589 Phage integrase family 164 316 5.4E-22 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RR42_RS19640 8f3003ef578db5789f313cea0c8e79aa 329 PANTHER PTHR30349 58 323 2.4E-44 T 23-04-2016 RR42_RS19640 8f3003ef578db5789f313cea0c8e79aa 329 Gene3D G3DSA:1.10.150.130 59 156 1.8E-6 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal RR42_RS19640 8f3003ef578db5789f313cea0c8e79aa 329 SUPERFAMILY SSF56349 59 324 5.0E-54 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RR42_RS19640 8f3003ef578db5789f313cea0c8e79aa 329 PANTHER PTHR30349:SF20 58 323 2.4E-44 T 23-04-2016 RR42_RS12370 38163aa3d4c77f921951a50e046eea46 256 Gene3D G3DSA:3.40.50.150 3 137 1.7E-31 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS12370 38163aa3d4c77f921951a50e046eea46 256 PANTHER PTHR10108 3 235 2.5E-53 T 23-04-2016 RR42_RS12370 38163aa3d4c77f921951a50e046eea46 256 PANTHER PTHR10108:SF890 3 235 2.5E-53 T 23-04-2016 RR42_RS12370 38163aa3d4c77f921951a50e046eea46 256 Pfam PF13489 Methyltransferase domain 13 143 4.1E-18 T 23-04-2016 RR42_RS12370 38163aa3d4c77f921951a50e046eea46 256 Gene3D G3DSA:1.10.150.290 181 235 9.4E-28 T 23-04-2016 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 RR42_RS12370 38163aa3d4c77f921951a50e046eea46 256 Gene3D G3DSA:1.10.150.290 138 144 9.4E-28 T 23-04-2016 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 RR42_RS12370 38163aa3d4c77f921951a50e046eea46 256 SUPERFAMILY SSF53335 13 195 8.67E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS05875 1185ee640f8737ecb14aa9adc9778bff 486 PANTHER PTHR30624:SF4 22 486 8.2E-221 T 23-04-2016 RR42_RS05875 1185ee640f8737ecb14aa9adc9778bff 486 Pfam PF01523 Putative modulator of DNA gyrase 43 337 1.4E-66 T 23-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RR42_RS05875 1185ee640f8737ecb14aa9adc9778bff 486 PIRSF PIRSF004919 23 486 2.3E-138 T 23-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RR42_RS05875 1185ee640f8737ecb14aa9adc9778bff 486 PANTHER PTHR30624 22 486 8.2E-221 T 23-04-2016 RR42_RS05875 1185ee640f8737ecb14aa9adc9778bff 486 SUPERFAMILY SSF111283 29 485 2.09E-132 T 23-04-2016 RR42_RS01125 bd5f75872589400f1052e69c84238a2b 305 Hamap MF_00082_B Acetylglutamate kinase [argB]. 36 304 35.693 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RR42_RS01125 bd5f75872589400f1052e69c84238a2b 305 Pfam PF00696 Amino acid kinase family 38 281 8.0E-44 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RR42_RS01125 bd5f75872589400f1052e69c84238a2b 305 TIGRFAM TIGR00761 argB: acetylglutamate kinase 39 279 1.8E-74 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RR42_RS01125 bd5f75872589400f1052e69c84238a2b 305 PANTHER PTHR23342 15 303 5.9E-110 T 23-04-2016 RR42_RS01125 bd5f75872589400f1052e69c84238a2b 305 Gene3D G3DSA:3.40.1160.10 36 303 3.0E-102 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RR42_RS01125 bd5f75872589400f1052e69c84238a2b 305 PIRSF PIRSF000728 23 304 5.1E-103 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RR42_RS01125 bd5f75872589400f1052e69c84238a2b 305 SUPERFAMILY SSF53633 21 304 1.44E-88 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RR42_RS01125 bd5f75872589400f1052e69c84238a2b 305 Hamap MF_00082_A Acetylglutamate kinase [argB]. 39 289 28.812 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RR42_RS03510 c31d019529ef515d02677ef5ccce3ce5 906 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 788 863 3.8E-13 T 23-04-2016 IPR019489 Clp ATPase, C-terminal RR42_RS03510 c31d019529ef515d02677ef5ccce3ce5 906 Gene3D G3DSA:3.40.50.300 571 798 2.7E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03510 c31d019529ef515d02677ef5ccce3ce5 906 Gene3D G3DSA:1.10.8.60 375 457 8.8E-29 T 23-04-2016 RR42_RS03510 c31d019529ef515d02677ef5ccce3ce5 906 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 324 336 - T 23-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 RR42_RS03510 c31d019529ef515d02677ef5ccce3ce5 906 SMART SM00382 228 373 1.4E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS03510 c31d019529ef515d02677ef5ccce3ce5 906 SMART SM00382 616 776 1.4E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS03510 c31d019529ef515d02677ef5ccce3ce5 906 SMART SM01086 788 880 1.9E-11 T 23-04-2016 IPR019489 Clp ATPase, C-terminal RR42_RS03510 c31d019529ef515d02677ef5ccce3ce5 906 Gene3D G3DSA:1.10.1780.10 9 151 4.3E-21 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 RR42_RS03510 c31d019529ef515d02677ef5ccce3ce5 906 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 872 0.0 T 23-04-2016 IPR017729 Type VI secretion system, ATPase ClpV1 RR42_RS03510 c31d019529ef515d02677ef5ccce3ce5 906 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 665 683 1.6E-31 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 RR42_RS03510 c31d019529ef515d02677ef5ccce3ce5 906 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 694 712 1.6E-31 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 RR42_RS03510 c31d019529ef515d02677ef5ccce3ce5 906 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 727 741 1.6E-31 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 RR42_RS03510 c31d019529ef515d02677ef5ccce3ce5 906 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 620 638 1.6E-31 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 RR42_RS03510 c31d019529ef515d02677ef5ccce3ce5 906 Gene3D G3DSA:3.40.50.300 190 371 2.6E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03510 c31d019529ef515d02677ef5ccce3ce5 906 PANTHER PTHR11638 172 901 0.0 T 23-04-2016 RR42_RS03510 c31d019529ef515d02677ef5ccce3ce5 906 PANTHER PTHR11638 1 145 0.0 T 23-04-2016 RR42_RS03510 c31d019529ef515d02677ef5ccce3ce5 906 Gene3D G3DSA:1.10.8.60 799 871 1.6E-11 T 23-04-2016 RR42_RS03510 c31d019529ef515d02677ef5ccce3ce5 906 SUPERFAMILY SSF81923 12 131 2.88E-19 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 RR42_RS03510 c31d019529ef515d02677ef5ccce3ce5 906 PANTHER PTHR11638:SF122 172 901 0.0 T 23-04-2016 RR42_RS03510 c31d019529ef515d02677ef5ccce3ce5 906 PANTHER PTHR11638:SF122 1 145 0.0 T 23-04-2016 RR42_RS03510 c31d019529ef515d02677ef5ccce3ce5 906 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 26 75 9.0E-7 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 RR42_RS03510 c31d019529ef515d02677ef5ccce3ce5 906 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 233 364 3.9E-11 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RR42_RS03510 c31d019529ef515d02677ef5ccce3ce5 906 SUPERFAMILY SSF52540 565 860 3.1E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03510 c31d019529ef515d02677ef5ccce3ce5 906 SUPERFAMILY SSF52540 190 511 8.5E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03510 c31d019529ef515d02677ef5ccce3ce5 906 Pfam PF07724 AAA domain (Cdc48 subfamily) 615 782 3.9E-36 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RR42_RS02510 c5fd0f2359ac3a6a6be76e652519b31f 808 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 8 191 1.8E-44 T 23-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RR42_RS02510 c5fd0f2359ac3a6a6be76e652519b31f 808 SUPERFAMILY SSF48179 192 311 2.38E-20 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RR42_RS02510 c5fd0f2359ac3a6a6be76e652519b31f 808 Gene3D G3DSA:1.10.1040.10 195 294 1.7E-15 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RR42_RS02510 c5fd0f2359ac3a6a6be76e652519b31f 808 PANTHER PTHR23309:SF2 4 464 1.9E-118 T 23-04-2016 RR42_RS02510 c5fd0f2359ac3a6a6be76e652519b31f 808 Gene3D G3DSA:1.10.1040.10 358 406 1.7E-6 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RR42_RS02510 c5fd0f2359ac3a6a6be76e652519b31f 808 Gene3D G3DSA:3.90.226.10 489 668 5.4E-23 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS02510 c5fd0f2359ac3a6a6be76e652519b31f 808 SUPERFAMILY SSF48179 343 464 1.28E-16 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RR42_RS02510 c5fd0f2359ac3a6a6be76e652519b31f 808 Gene3D G3DSA:3.40.50.720 5 194 4.9E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS02510 c5fd0f2359ac3a6a6be76e652519b31f 808 SUPERFAMILY SSF51735 5 192 1.26E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS02510 c5fd0f2359ac3a6a6be76e652519b31f 808 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 194 293 1.8E-12 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RR42_RS02510 c5fd0f2359ac3a6a6be76e652519b31f 808 Pfam PF00378 Enoyl-CoA hydratase/isomerase 492 635 3.2E-10 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RR42_RS02510 c5fd0f2359ac3a6a6be76e652519b31f 808 PANTHER PTHR23309 4 464 1.9E-118 T 23-04-2016 RR42_RS02510 c5fd0f2359ac3a6a6be76e652519b31f 808 SUPERFAMILY SSF52096 487 804 6.06E-33 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS10060 c75c9a2ea57892c938e29f8c9c1f7e34 339 SUPERFAMILY SSF63380 2 103 1.14E-24 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RR42_RS10060 c75c9a2ea57892c938e29f8c9c1f7e34 339 PRINTS PR00409 Phthalate dioxygenase reductase family signature 113 132 4.1E-11 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RR42_RS10060 c75c9a2ea57892c938e29f8c9c1f7e34 339 PRINTS PR00409 Phthalate dioxygenase reductase family signature 54 68 4.1E-11 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RR42_RS10060 c75c9a2ea57892c938e29f8c9c1f7e34 339 PRINTS PR00409 Phthalate dioxygenase reductase family signature 91 105 4.1E-11 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RR42_RS10060 c75c9a2ea57892c938e29f8c9c1f7e34 339 PRINTS PR00409 Phthalate dioxygenase reductase family signature 139 148 4.1E-11 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RR42_RS10060 c75c9a2ea57892c938e29f8c9c1f7e34 339 PRINTS PR00409 Phthalate dioxygenase reductase family signature 197 205 4.1E-11 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RR42_RS10060 c75c9a2ea57892c938e29f8c9c1f7e34 339 Gene3D G3DSA:2.40.30.10 2 94 2.6E-23 T 23-04-2016 RR42_RS10060 c75c9a2ea57892c938e29f8c9c1f7e34 339 PANTHER PTHR19370 1 229 3.3E-40 T 23-04-2016 RR42_RS10060 c75c9a2ea57892c938e29f8c9c1f7e34 339 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 260 327 3.3E-13 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS10060 c75c9a2ea57892c938e29f8c9c1f7e34 339 Pfam PF00175 Oxidoreductase NAD-binding domain 115 210 2.9E-10 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RR42_RS10060 c75c9a2ea57892c938e29f8c9c1f7e34 339 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 285 293 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RR42_RS10060 c75c9a2ea57892c938e29f8c9c1f7e34 339 Gene3D G3DSA:3.10.20.30 224 332 8.5E-27 T 23-04-2016 IPR012675 Beta-grasp domain RR42_RS10060 c75c9a2ea57892c938e29f8c9c1f7e34 339 Pfam PF00970 Oxidoreductase FAD-binding domain 7 103 2.3E-13 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain RR42_RS10060 c75c9a2ea57892c938e29f8c9c1f7e34 339 SUPERFAMILY SSF52343 94 227 1.26E-26 T 23-04-2016 RR42_RS10060 c75c9a2ea57892c938e29f8c9c1f7e34 339 Gene3D G3DSA:3.40.50.80 95 220 5.9E-26 T 23-04-2016 RR42_RS10060 c75c9a2ea57892c938e29f8c9c1f7e34 339 SUPERFAMILY SSF54292 221 334 1.84E-25 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS10060 c75c9a2ea57892c938e29f8c9c1f7e34 339 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 113 132 1.4E-6 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS10060 c75c9a2ea57892c938e29f8c9c1f7e34 339 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 197 205 1.4E-6 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS10060 c75c9a2ea57892c938e29f8c9c1f7e34 339 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 137 146 1.4E-6 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS10060 c75c9a2ea57892c938e29f8c9c1f7e34 339 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 54 61 1.4E-6 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RR42_RS20190 f646c1c4097c56e00f3b26a624289052 287 Gene3D G3DSA:1.20.120.220 98 287 1.3E-48 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RR42_RS20190 f646c1c4097c56e00f3b26a624289052 287 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 38 282 3.6E-42 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RR42_RS20190 f646c1c4097c56e00f3b26a624289052 287 ProSitePatterns PS00449 ATP synthase a subunit signature. 210 219 - T 23-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site RR42_RS20190 f646c1c4097c56e00f3b26a624289052 287 PANTHER PTHR11410:SF7 141 287 3.6E-72 T 23-04-2016 RR42_RS20190 f646c1c4097c56e00f3b26a624289052 287 PANTHER PTHR11410:SF7 40 121 3.6E-72 T 23-04-2016 RR42_RS20190 f646c1c4097c56e00f3b26a624289052 287 PANTHER PTHR11410 141 287 3.6E-72 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RR42_RS20190 f646c1c4097c56e00f3b26a624289052 287 PANTHER PTHR11410 40 121 3.6E-72 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RR42_RS20190 f646c1c4097c56e00f3b26a624289052 287 Hamap MF_01393 ATP synthase subunit a [atpB]. 18 287 13.967 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RR42_RS20190 f646c1c4097c56e00f3b26a624289052 287 Pfam PF00119 ATP synthase A chain 45 280 1.8E-54 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RR42_RS20190 f646c1c4097c56e00f3b26a624289052 287 SUPERFAMILY SSF81336 95 281 1.7E-38 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RR42_RS14035 99fcd9145f3cb0334a458923f8338e2d 311 PANTHER PTHR11649:SF3 20 311 2.5E-103 T 23-04-2016 RR42_RS14035 99fcd9145f3cb0334a458923f8338e2d 311 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 24 44 1.5E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RR42_RS14035 99fcd9145f3cb0334a458923f8338e2d 311 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 92 110 1.5E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RR42_RS14035 99fcd9145f3cb0334a458923f8338e2d 311 TIGRFAM TIGR00436 era: GTP-binding protein Era 22 293 1.9E-85 T 23-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 RR42_RS14035 99fcd9145f3cb0334a458923f8338e2d 311 Gene3D G3DSA:3.30.300.20 207 306 1.2E-35 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta RR42_RS14035 99fcd9145f3cb0334a458923f8338e2d 311 Gene3D G3DSA:3.40.50.300 21 206 1.1E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14035 99fcd9145f3cb0334a458923f8338e2d 311 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 21 183 8.8E-27 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RR42_RS14035 99fcd9145f3cb0334a458923f8338e2d 311 SUPERFAMILY SSF52540 23 220 1.1E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14035 99fcd9145f3cb0334a458923f8338e2d 311 Pfam PF07650 KH domain 223 298 3.3E-16 T 23-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 RR42_RS14035 99fcd9145f3cb0334a458923f8338e2d 311 PANTHER PTHR11649 20 311 2.5E-103 T 23-04-2016 RR42_RS14035 99fcd9145f3cb0334a458923f8338e2d 311 SUPERFAMILY SSF54814 197 311 1.63E-38 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RR42_RS14035 99fcd9145f3cb0334a458923f8338e2d 311 Hamap MF_00367 GTPase Era [era]. 19 310 34.322 T 23-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 RR42_RS14035 99fcd9145f3cb0334a458923f8338e2d 311 Pfam PF01926 50S ribosome-binding GTPase 24 137 1.4E-24 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RR42_RS10465 4b4a46777fb88bb9b1645c4348e03a0f 114 Gene3D G3DSA:1.10.1710.10 10 110 7.3E-14 T 23-04-2016 IPR016103 ProQ/FinO domain RR42_RS10465 4b4a46777fb88bb9b1645c4348e03a0f 114 SMART SM00945 38 114 1.8E-5 T 23-04-2016 IPR016103 ProQ/FinO domain RR42_RS10465 4b4a46777fb88bb9b1645c4348e03a0f 114 PANTHER PTHR38106 34 110 3.0E-16 T 23-04-2016 RR42_RS10465 4b4a46777fb88bb9b1645c4348e03a0f 114 SUPERFAMILY SSF48657 11 110 1.44E-20 T 23-04-2016 IPR016103 ProQ/FinO domain RR42_RS10465 4b4a46777fb88bb9b1645c4348e03a0f 114 PANTHER PTHR38106:SF1 34 110 3.0E-16 T 23-04-2016 RR42_RS10465 4b4a46777fb88bb9b1645c4348e03a0f 114 Pfam PF04352 ProQ/FINO family 41 110 3.0E-21 T 23-04-2016 IPR016103 ProQ/FinO domain RR42_RS01815 af75ee7bbef5fd9bbdf9984672b65e4e 255 PANTHER PTHR10953 1 247 2.0E-84 T 23-04-2016 RR42_RS01815 af75ee7bbef5fd9bbdf9984672b65e4e 255 SUPERFAMILY SSF69572 2 248 8.37E-84 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RR42_RS01815 af75ee7bbef5fd9bbdf9984672b65e4e 255 PANTHER PTHR10953:SF158 1 247 2.0E-84 T 23-04-2016 RR42_RS01815 af75ee7bbef5fd9bbdf9984672b65e4e 255 Gene3D G3DSA:3.40.50.720 3 247 4.0E-72 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS01815 af75ee7bbef5fd9bbdf9984672b65e4e 255 Pfam PF00899 ThiF family 9 243 5.4E-63 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RR42_RS20115 5aca596b20feee9480d0ef2da9f6e326 83 PANTHER PTHR33713:SF5 1 83 2.7E-12 T 23-04-2016 RR42_RS20115 5aca596b20feee9480d0ef2da9f6e326 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 9 73 5.3E-10 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RR42_RS20115 5aca596b20feee9480d0ef2da9f6e326 83 PANTHER PTHR33713 1 83 2.7E-12 T 23-04-2016 RR42_RS20115 5aca596b20feee9480d0ef2da9f6e326 83 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 9 52 1.2E-5 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RR42_RS20115 5aca596b20feee9480d0ef2da9f6e326 83 SUPERFAMILY SSF143120 9 72 1.31E-8 T 23-04-2016 RR42_RS10880 6ccfcfd12668c53294f47dfb0154fbd4 232 PANTHER PTHR24198 32 212 4.3E-44 T 23-04-2016 RR42_RS10880 6ccfcfd12668c53294f47dfb0154fbd4 232 SMART SM00248 92 122 0.43 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 RR42_RS10880 6ccfcfd12668c53294f47dfb0154fbd4 232 SMART SM00248 58 88 260.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 RR42_RS10880 6ccfcfd12668c53294f47dfb0154fbd4 232 SMART SM00248 123 152 2.8E-6 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 RR42_RS10880 6ccfcfd12668c53294f47dfb0154fbd4 232 SMART SM00248 156 185 5.2E-7 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 RR42_RS10880 6ccfcfd12668c53294f47dfb0154fbd4 232 PRINTS PR01415 Ankyrin repeat signature 124 139 3.3E-9 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 RR42_RS10880 6ccfcfd12668c53294f47dfb0154fbd4 232 PRINTS PR01415 Ankyrin repeat signature 172 186 3.3E-9 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 RR42_RS10880 6ccfcfd12668c53294f47dfb0154fbd4 232 SUPERFAMILY SSF48403 31 211 3.89E-45 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain RR42_RS10880 6ccfcfd12668c53294f47dfb0154fbd4 232 Gene3D G3DSA:1.25.40.20 32 212 9.1E-49 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain RR42_RS10880 6ccfcfd12668c53294f47dfb0154fbd4 232 Pfam PF12796 Ankyrin repeats (3 copies) 119 187 8.6E-20 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain RR42_RS17475 31fd611e5149f9adbea5ba9aa3cd0432 303 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 8 289 42.079 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS17475 31fd611e5149f9adbea5ba9aa3cd0432 303 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 44 61 - T 23-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS17475 31fd611e5149f9adbea5ba9aa3cd0432 303 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 139 169 - T 23-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS17475 31fd611e5149f9adbea5ba9aa3cd0432 303 Gene3D G3DSA:3.20.20.70 12 290 7.1E-86 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS17475 31fd611e5149f9adbea5ba9aa3cd0432 303 PANTHER PTHR12128 15 297 7.2E-81 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS17475 31fd611e5149f9adbea5ba9aa3cd0432 303 Pfam PF00701 Dihydrodipicolinate synthetase family 15 287 6.9E-62 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS17475 31fd611e5149f9adbea5ba9aa3cd0432 303 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 16 289 5.8E-65 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RR42_RS17475 31fd611e5149f9adbea5ba9aa3cd0432 303 PANTHER PTHR12128:SF34 15 297 7.2E-81 T 23-04-2016 RR42_RS17475 31fd611e5149f9adbea5ba9aa3cd0432 303 SUPERFAMILY SSF51569 12 290 9.21E-80 T 23-04-2016 RR42_RS17475 31fd611e5149f9adbea5ba9aa3cd0432 303 PIRSF PIRSF001365 8 296 6.2E-74 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS17475 31fd611e5149f9adbea5ba9aa3cd0432 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 109 125 1.3E-21 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS17475 31fd611e5149f9adbea5ba9aa3cd0432 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 41 62 1.3E-21 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS17475 31fd611e5149f9adbea5ba9aa3cd0432 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 77 95 1.3E-21 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS17475 31fd611e5149f9adbea5ba9aa3cd0432 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 134 151 1.3E-21 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS17475 31fd611e5149f9adbea5ba9aa3cd0432 303 SMART SM01130 8 291 5.8E-89 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS08885 ae6144f392473fe29d7235e067c7bf6d 226 SMART SM00100 16 135 1.9E-15 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain RR42_RS08885 ae6144f392473fe29d7235e067c7bf6d 226 SUPERFAMILY SSF46785 150 220 9.1E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS08885 ae6144f392473fe29d7235e067c7bf6d 226 Pfam PF13545 Crp-like helix-turn-helix domain 155 221 2.3E-11 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RR42_RS08885 ae6144f392473fe29d7235e067c7bf6d 226 Pfam PF00027 Cyclic nucleotide-binding domain 35 122 2.9E-15 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain RR42_RS08885 ae6144f392473fe29d7235e067c7bf6d 226 Gene3D G3DSA:2.60.120.10 13 147 8.9E-28 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS08885 ae6144f392473fe29d7235e067c7bf6d 226 SMART SM00419 167 215 2.5E-7 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RR42_RS08885 ae6144f392473fe29d7235e067c7bf6d 226 SUPERFAMILY SSF51206 10 146 6.42E-31 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like RR42_RS08885 ae6144f392473fe29d7235e067c7bf6d 226 PANTHER PTHR24567 11 222 4.3E-34 T 23-04-2016 RR42_RS08885 ae6144f392473fe29d7235e067c7bf6d 226 Gene3D G3DSA:1.10.10.10 167 223 1.1E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS08885 ae6144f392473fe29d7235e067c7bf6d 226 PANTHER PTHR24567:SF30 11 222 4.3E-34 T 23-04-2016 RR42_RS14475 2d9cee9348cb4ad8799e1da4ff183310 387 PANTHER PTHR11739 20 386 1.0E-146 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS14475 2d9cee9348cb4ad8799e1da4ff183310 387 PIRSF PIRSF001369 13 387 5.3E-108 T 23-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 RR42_RS14475 2d9cee9348cb4ad8799e1da4ff183310 387 PRINTS PR00143 Citrate synthase signature 339 353 6.42E-36 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS14475 2d9cee9348cb4ad8799e1da4ff183310 387 PRINTS PR00143 Citrate synthase signature 319 335 6.42E-36 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS14475 2d9cee9348cb4ad8799e1da4ff183310 387 PRINTS PR00143 Citrate synthase signature 262 282 6.42E-36 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS14475 2d9cee9348cb4ad8799e1da4ff183310 387 PRINTS PR00143 Citrate synthase signature 209 237 6.42E-36 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS14475 2d9cee9348cb4ad8799e1da4ff183310 387 PRINTS PR00143 Citrate synthase signature 187 202 6.42E-36 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS14475 2d9cee9348cb4ad8799e1da4ff183310 387 PRINTS PR00143 Citrate synthase signature 137 150 6.42E-36 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS14475 2d9cee9348cb4ad8799e1da4ff183310 387 SUPERFAMILY SSF48256 20 379 8.11E-120 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS14475 2d9cee9348cb4ad8799e1da4ff183310 387 Gene3D G3DSA:1.10.580.10 25 247 1.8E-72 T 23-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 RR42_RS14475 2d9cee9348cb4ad8799e1da4ff183310 387 Pfam PF00285 Citrate synthase, C-terminal domain 20 368 3.5E-109 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS14475 2d9cee9348cb4ad8799e1da4ff183310 387 ProSitePatterns PS00480 Citrate synthase signature. 269 281 - T 23-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 RR42_RS14475 2d9cee9348cb4ad8799e1da4ff183310 387 PANTHER PTHR11739:SF4 20 386 1.0E-146 T 23-04-2016 RR42_RS14475 2d9cee9348cb4ad8799e1da4ff183310 387 Gene3D G3DSA:1.10.230.10 248 333 1.2E-27 T 23-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain RR42_RS14475 2d9cee9348cb4ad8799e1da4ff183310 387 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 19 386 6.4E-153 T 23-04-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 RR42_RS06305 ff3393ff302f6c2e87c386f4260ddf3b 208 PANTHER PTHR34071:SF2 1 202 1.6E-44 T 23-04-2016 RR42_RS06305 ff3393ff302f6c2e87c386f4260ddf3b 208 PANTHER PTHR34071 1 202 1.6E-44 T 23-04-2016 RR42_RS06305 ff3393ff302f6c2e87c386f4260ddf3b 208 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 1 135 7.1E-37 T 23-04-2016 IPR024747 Pyridoxamine 5'-phosphate oxidase-related RR42_RS06305 ff3393ff302f6c2e87c386f4260ddf3b 208 Gene3D G3DSA:2.30.110.10 1 157 2.9E-64 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RR42_RS06305 ff3393ff302f6c2e87c386f4260ddf3b 208 SUPERFAMILY SSF50475 1 157 3.51E-48 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RR42_RS03590 cdfac823b1562fd88afa73eeaea905a6 249 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 13 151 4.8E-18 T 23-04-2016 IPR017748 Type VI secretion system-associated, BMAA0400 RR42_RS03590 cdfac823b1562fd88afa73eeaea905a6 249 Gene3D G3DSA:3.40.1730.10 10 173 2.3E-23 T 23-04-2016 RR42_RS20285 3ddf1ca5e1ef5db4645447b07d01df27 258 PANTHER PTHR24220:SF400 9 248 3.2E-119 T 23-04-2016 RR42_RS20285 3ddf1ca5e1ef5db4645447b07d01df27 258 Gene3D G3DSA:3.40.50.300 4 246 1.7E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20285 3ddf1ca5e1ef5db4645447b07d01df27 258 PANTHER PTHR24220 9 248 3.2E-119 T 23-04-2016 RR42_RS20285 3ddf1ca5e1ef5db4645447b07d01df27 258 SMART SM00382 32 226 2.1E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS20285 3ddf1ca5e1ef5db4645447b07d01df27 258 Pfam PF00005 ABC transporter 24 179 3.5E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS20285 3ddf1ca5e1ef5db4645447b07d01df27 258 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 227 248 4.2E-8 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RR42_RS20285 3ddf1ca5e1ef5db4645447b07d01df27 258 SUPERFAMILY SSF52540 7 248 2.13E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03215 19e749678e59baec37e96058f109630d 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 328 1.4E-96 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RR42_RS03215 19e749678e59baec37e96058f109630d 354 PIRSF PIRSF001359 1 329 4.5E-87 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RR42_RS03215 19e749678e59baec37e96058f109630d 354 Gene3D G3DSA:3.20.20.70 1 335 8.3E-113 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS03215 19e749678e59baec37e96058f109630d 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 4.0E-101 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RR42_RS03215 19e749678e59baec37e96058f109630d 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RR42_RS03215 19e749678e59baec37e96058f109630d 354 SUPERFAMILY SSF51569 3 329 9.23E-108 T 23-04-2016 RR42_RS03215 19e749678e59baec37e96058f109630d 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 7.6E-188 T 23-04-2016 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 RR42_RS03215 19e749678e59baec37e96058f109630d 354 PANTHER PTHR30304 1 349 4.2E-124 T 23-04-2016 RR42_RS03215 19e749678e59baec37e96058f109630d 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RR42_RS14665 ec31078e3378ce7517b416894de19532 783 SUPERFAMILY SSF56719 40 510 2.62E-147 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RR42_RS14665 ec31078e3378ce7517b416894de19532 783 PANTHER PTHR10169 15 276 8.8E-197 T 23-04-2016 RR42_RS14665 ec31078e3378ce7517b416894de19532 783 PANTHER PTHR10169 298 556 8.8E-197 T 23-04-2016 RR42_RS14665 ec31078e3378ce7517b416894de19532 783 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 13 773 32.836 T 23-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RR42_RS14665 ec31078e3378ce7517b416894de19532 783 SUPERFAMILY SSF101904 533 768 1.7E-47 T 23-04-2016 RR42_RS14665 ec31078e3378ce7517b416894de19532 783 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 677 722 5.8E-6 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RR42_RS14665 ec31078e3378ce7517b416894de19532 783 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 628 663 2.3 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RR42_RS14665 ec31078e3378ce7517b416894de19532 783 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 41 491 4.4E-131 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS14665 ec31078e3378ce7517b416894de19532 783 Gene3D G3DSA:3.30.1360.40 246 362 2.0E-20 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain RR42_RS14665 ec31078e3378ce7517b416894de19532 783 Gene3D G3DSA:3.90.199.10 40 245 4.2E-110 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 RR42_RS14665 ec31078e3378ce7517b416894de19532 783 Gene3D G3DSA:3.90.199.10 364 429 4.2E-110 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 RR42_RS14665 ec31078e3378ce7517b416894de19532 783 PANTHER PTHR10169:SF30 15 276 8.8E-197 T 23-04-2016 RR42_RS14665 ec31078e3378ce7517b416894de19532 783 PANTHER PTHR10169:SF30 298 556 8.8E-197 T 23-04-2016 RR42_RS14665 ec31078e3378ce7517b416894de19532 783 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 19 714 1.3E-225 T 23-04-2016 RR42_RS14665 ec31078e3378ce7517b416894de19532 783 SMART SM00434 20 492 4.0E-218 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS14665 ec31078e3378ce7517b416894de19532 783 Gene3D G3DSA:2.120.10.90 529 728 7.8E-29 T 23-04-2016 RR42_RS13580 dc5b80fd66bc291cb584ac494d70a2a8 145 Hamap MF_00042 Ribonuclease H [rnhA]. 1 145 31.777 T 23-04-2016 IPR022892 Ribonuclease H GO:0004523 RR42_RS13580 dc5b80fd66bc291cb584ac494d70a2a8 145 Pfam PF00075 RNase H 2 140 4.6E-50 T 23-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 RR42_RS13580 dc5b80fd66bc291cb584ac494d70a2a8 145 SUPERFAMILY SSF53098 3 141 9.86E-59 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS13580 dc5b80fd66bc291cb584ac494d70a2a8 145 PANTHER PTHR10642 3 141 6.9E-55 T 23-04-2016 RR42_RS13580 dc5b80fd66bc291cb584ac494d70a2a8 145 Gene3D G3DSA:3.30.420.10 3 142 5.0E-61 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS08060 40f6a7c49639a9c77d71c9ba920d4271 104 Gene3D G3DSA:1.10.10.10 8 55 5.0E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS11930 a7122011c99daa56db5899e5c76af98f 405 PANTHER PTHR11751 12 400 6.4E-117 T 23-04-2016 RR42_RS11930 a7122011c99daa56db5899e5c76af98f 405 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 401 5.7E-180 T 23-04-2016 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 RR42_RS11930 a7122011c99daa56db5899e5c76af98f 405 Pfam PF00155 Aminotransferase class I and II 32 397 5.9E-45 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RR42_RS11930 a7122011c99daa56db5899e5c76af98f 405 SUPERFAMILY SSF53383 2 402 1.01E-86 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS11930 a7122011c99daa56db5899e5c76af98f 405 Gene3D G3DSA:3.40.640.10 43 267 4.0E-59 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS11930 a7122011c99daa56db5899e5c76af98f 405 Gene3D G3DSA:3.90.1150.10 268 403 1.7E-27 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS11930 a7122011c99daa56db5899e5c76af98f 405 PANTHER PTHR11751:SF354 12 400 6.4E-117 T 23-04-2016 RR42_RS03715 5b964a63bef98fb96cc94bb5120207c7 263 Pfam PF00459 Inositol monophosphatase family 11 260 1.1E-50 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RR42_RS03715 5b964a63bef98fb96cc94bb5120207c7 263 Gene3D G3DSA:3.40.190.80 156 260 5.6E-24 T 23-04-2016 RR42_RS03715 5b964a63bef98fb96cc94bb5120207c7 263 PANTHER PTHR20854:SF38 3 261 3.0E-97 T 23-04-2016 RR42_RS03715 5b964a63bef98fb96cc94bb5120207c7 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 1.5E-27 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RR42_RS03715 5b964a63bef98fb96cc94bb5120207c7 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 67 83 1.5E-27 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RR42_RS03715 5b964a63bef98fb96cc94bb5120207c7 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 179 200 1.5E-27 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RR42_RS03715 5b964a63bef98fb96cc94bb5120207c7 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 45 65 1.5E-27 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RR42_RS03715 5b964a63bef98fb96cc94bb5120207c7 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 87 103 1.5E-27 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RR42_RS03715 5b964a63bef98fb96cc94bb5120207c7 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 135 158 1.5E-27 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RR42_RS03715 5b964a63bef98fb96cc94bb5120207c7 263 SUPERFAMILY SSF56655 10 260 1.96E-72 T 23-04-2016 RR42_RS03715 5b964a63bef98fb96cc94bb5120207c7 263 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 87 100 - T 23-04-2016 IPR020583 Inositol monophosphatase, metal-binding site RR42_RS03715 5b964a63bef98fb96cc94bb5120207c7 263 PANTHER PTHR20854 3 261 3.0E-97 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RR42_RS03715 5b964a63bef98fb96cc94bb5120207c7 263 Gene3D G3DSA:3.30.540.10 8 155 3.8E-42 T 23-04-2016 RR42_RS03715 5b964a63bef98fb96cc94bb5120207c7 263 TIGRFAM TIGR02067 his_9_HisN: histidinol-phosphatase 13 260 3.2E-95 T 23-04-2016 IPR011809 Histidinol-phosphate phosphatase, putative, inositol monophosphatase GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 RR42_RS32175 6d3897c26eb8768dbdadb486a0f47880 360 Gene3D G3DSA:2.60.40.1090 278 358 4.9E-8 T 23-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RR42_RS32175 6d3897c26eb8768dbdadb486a0f47880 360 SUPERFAMILY SSF49401 277 359 2.67E-8 T 23-04-2016 IPR008966 Adhesion domain RR42_RS20020 8cacb4e59cd6e6fe8d00f203b3f326ad 293 Gene3D G3DSA:1.10.760.10 215 290 7.3E-29 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS20020 8cacb4e59cd6e6fe8d00f203b3f326ad 293 Gene3D G3DSA:1.10.760.10 82 159 2.4E-27 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS20020 8cacb4e59cd6e6fe8d00f203b3f326ad 293 PRINTS PR00607 Class IE cytochrome C signature 264 276 4.8E-13 T 23-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 RR42_RS20020 8cacb4e59cd6e6fe8d00f203b3f326ad 293 PRINTS PR00607 Class IE cytochrome C signature 225 236 4.8E-13 T 23-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 RR42_RS20020 8cacb4e59cd6e6fe8d00f203b3f326ad 293 PRINTS PR00607 Class IE cytochrome C signature 236 246 4.8E-13 T 23-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 RR42_RS20020 8cacb4e59cd6e6fe8d00f203b3f326ad 293 PRINTS PR00607 Class IE cytochrome C signature 278 289 4.8E-13 T 23-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 RR42_RS20020 8cacb4e59cd6e6fe8d00f203b3f326ad 293 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 215 288 2.9E-16 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS20020 8cacb4e59cd6e6fe8d00f203b3f326ad 293 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 82 157 8.7E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS20020 8cacb4e59cd6e6fe8d00f203b3f326ad 293 SUPERFAMILY SSF46626 81 158 2.29E-15 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS20020 8cacb4e59cd6e6fe8d00f203b3f326ad 293 PANTHER PTHR40942 172 293 5.3E-22 T 23-04-2016 RR42_RS20020 8cacb4e59cd6e6fe8d00f203b3f326ad 293 SUPERFAMILY SSF46626 214 290 2.36E-17 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS20020 8cacb4e59cd6e6fe8d00f203b3f326ad 293 PANTHER PTHR40942:SF1 172 293 5.3E-22 T 23-04-2016 RR42_RS09890 e226e10e87f887736de8e24056b24343 526 Pfam PF13193 AMP-binding enzyme C-terminal domain 435 510 3.0E-19 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RR42_RS09890 e226e10e87f887736de8e24056b24343 526 ProSitePatterns PS00455 Putative AMP-binding domain signature. 179 190 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS09890 e226e10e87f887736de8e24056b24343 526 SUPERFAMILY SSF56801 13 520 1.57E-145 T 23-04-2016 RR42_RS09890 e226e10e87f887736de8e24056b24343 526 PANTHER PTHR24096 11 520 9.9E-232 T 23-04-2016 RR42_RS09890 e226e10e87f887736de8e24056b24343 526 Pfam PF00501 AMP-binding enzyme 21 426 4.4E-93 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS09890 e226e10e87f887736de8e24056b24343 526 Gene3D G3DSA:2.30.38.10 344 417 8.7E-24 T 23-04-2016 RR42_RS09890 e226e10e87f887736de8e24056b24343 526 PANTHER PTHR24096:SF229 11 520 9.9E-232 T 23-04-2016 RR42_RS09890 e226e10e87f887736de8e24056b24343 526 Gene3D G3DSA:3.40.50.980 14 193 1.5E-34 T 23-04-2016 RR42_RS09890 e226e10e87f887736de8e24056b24343 526 Gene3D G3DSA:3.30.300.30 421 519 4.7E-32 T 23-04-2016 RR42_RS09890 e226e10e87f887736de8e24056b24343 526 Gene3D G3DSA:3.40.50.980 194 338 1.2E-29 T 23-04-2016 RR42_RS04805 71587d6b34680b2bcfb8d6b23be8db11 312 Pfam PF05726 Pirin C-terminal cupin domain 197 303 3.5E-32 T 23-04-2016 IPR008778 Pirin, C-terminal domain RR42_RS04805 71587d6b34680b2bcfb8d6b23be8db11 312 SUPERFAMILY SSF51182 26 306 7.47E-90 T 23-04-2016 IPR011051 RmlC-like cupin domain RR42_RS04805 71587d6b34680b2bcfb8d6b23be8db11 312 Pfam PF02678 Pirin 42 142 9.5E-35 T 23-04-2016 IPR003829 Pirin, N-terminal domain RR42_RS04805 71587d6b34680b2bcfb8d6b23be8db11 312 PIRSF PIRSF006232 23 311 1.4E-99 T 23-04-2016 IPR012093 Pirin RR42_RS04805 71587d6b34680b2bcfb8d6b23be8db11 312 Gene3D G3DSA:2.60.120.10 24 277 6.3E-84 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS04805 71587d6b34680b2bcfb8d6b23be8db11 312 PANTHER PTHR13903:SF8 18 303 2.2E-129 T 23-04-2016 RR42_RS04805 71587d6b34680b2bcfb8d6b23be8db11 312 PANTHER PTHR13903 18 303 2.2E-129 T 23-04-2016 IPR012093 Pirin RR42_RS14745 680325b434bb24f78e29457e1c5ab3da 166 PRINTS PR00070 Dihydrofolate reductase signature 93 107 5.5E-17 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RR42_RS14745 680325b434bb24f78e29457e1c5ab3da 166 PRINTS PR00070 Dihydrofolate reductase signature 42 53 5.5E-17 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RR42_RS14745 680325b434bb24f78e29457e1c5ab3da 166 PRINTS PR00070 Dihydrofolate reductase signature 15 25 5.5E-17 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RR42_RS14745 680325b434bb24f78e29457e1c5ab3da 166 PRINTS PR00070 Dihydrofolate reductase signature 29 37 5.5E-17 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RR42_RS14745 680325b434bb24f78e29457e1c5ab3da 166 Gene3D G3DSA:3.40.430.10 2 160 2.6E-63 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain RR42_RS14745 680325b434bb24f78e29457e1c5ab3da 166 Pfam PF00186 Dihydrofolate reductase 4 160 7.2E-62 T 23-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RR42_RS14745 680325b434bb24f78e29457e1c5ab3da 166 PANTHER PTHR22778 1 160 5.5E-51 T 23-04-2016 RR42_RS14745 680325b434bb24f78e29457e1c5ab3da 166 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 15 37 - T 23-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RR42_RS14745 680325b434bb24f78e29457e1c5ab3da 166 PANTHER PTHR22778:SF16 1 160 5.5E-51 T 23-04-2016 RR42_RS14745 680325b434bb24f78e29457e1c5ab3da 166 PIRSF PIRSF000194 1 163 9.2E-66 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RR42_RS14745 680325b434bb24f78e29457e1c5ab3da 166 SUPERFAMILY SSF53597 4 160 1.44E-59 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain RR42_RS12295 c1bbfa790b126b2da5f67d4a2b137c23 335 PANTHER PTHR30368:SF2 23 335 9.7E-191 T 23-04-2016 RR42_RS12295 c1bbfa790b126b2da5f67d4a2b137c23 335 PANTHER PTHR30368 23 335 9.7E-191 T 23-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 RR42_RS12295 c1bbfa790b126b2da5f67d4a2b137c23 335 Pfam PF13531 Bacterial extracellular solute-binding protein 35 283 6.0E-48 T 23-04-2016 RR42_RS12295 c1bbfa790b126b2da5f67d4a2b137c23 335 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 23 329 1.7E-154 T 23-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 RR42_RS12295 c1bbfa790b126b2da5f67d4a2b137c23 335 Gene3D G3DSA:3.40.190.10 117 281 1.2E-81 T 23-04-2016 RR42_RS12295 c1bbfa790b126b2da5f67d4a2b137c23 335 ProSitePatterns PS00401 Prokaryotic sulfate-binding proteins signature 1. 51 63 - T 23-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 RR42_RS12295 c1bbfa790b126b2da5f67d4a2b137c23 335 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 148 156 - T 23-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 RR42_RS12295 c1bbfa790b126b2da5f67d4a2b137c23 335 SUPERFAMILY SSF53850 24 331 2.21E-95 T 23-04-2016 RR42_RS06220 088a7394ce847753f63cce35766015be 370 SUPERFAMILY SSF51905 14 339 8.49E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS06220 088a7394ce847753f63cce35766015be 370 Gene3D G3DSA:3.50.50.60 278 353 3.6E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS06220 088a7394ce847753f63cce35766015be 370 Gene3D G3DSA:3.50.50.60 24 156 3.6E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS06220 088a7394ce847753f63cce35766015be 370 Hamap MF_01685 Ferredoxin--NADP reductase. 24 360 39.062 T 23-04-2016 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 RR42_RS06220 088a7394ce847753f63cce35766015be 370 PANTHER PTHR22912:SF158 11 351 8.9E-73 T 23-04-2016 RR42_RS06220 088a7394ce847753f63cce35766015be 370 PANTHER PTHR22912 11 351 8.9E-73 T 23-04-2016 RR42_RS06220 088a7394ce847753f63cce35766015be 370 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 26 325 1.8E-22 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS06220 088a7394ce847753f63cce35766015be 370 Gene3D G3DSA:3.50.50.60 162 273 4.7E-16 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS06220 088a7394ce847753f63cce35766015be 370 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 144 153 1.5E-14 T 23-04-2016 RR42_RS06220 088a7394ce847753f63cce35766015be 370 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 185 210 1.5E-14 T 23-04-2016 RR42_RS06220 088a7394ce847753f63cce35766015be 370 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 26 48 1.5E-14 T 23-04-2016 RR42_RS06220 088a7394ce847753f63cce35766015be 370 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 312 319 1.5E-14 T 23-04-2016 RR42_RS06220 088a7394ce847753f63cce35766015be 370 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 27 46 8.2E-15 T 23-04-2016 RR42_RS06220 088a7394ce847753f63cce35766015be 370 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 185 203 8.2E-15 T 23-04-2016 RR42_RS06220 088a7394ce847753f63cce35766015be 370 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 297 319 8.2E-15 T 23-04-2016 RR42_RS15900 4107d873f52c199d1d46cf647cdea16c 333 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 16 314 36.67 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS15900 4107d873f52c199d1d46cf647cdea16c 333 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 17 222 1.3E-74 T 23-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS15900 4107d873f52c199d1d46cf647cdea16c 333 PRINTS PR00151 Porphobilinogen deaminase signature 154 171 1.8E-46 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS15900 4107d873f52c199d1d46cf647cdea16c 333 PRINTS PR00151 Porphobilinogen deaminase signature 241 258 1.8E-46 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS15900 4107d873f52c199d1d46cf647cdea16c 333 PRINTS PR00151 Porphobilinogen deaminase signature 56 76 1.8E-46 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS15900 4107d873f52c199d1d46cf647cdea16c 333 PRINTS PR00151 Porphobilinogen deaminase signature 135 152 1.8E-46 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS15900 4107d873f52c199d1d46cf647cdea16c 333 PRINTS PR00151 Porphobilinogen deaminase signature 87 106 1.8E-46 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS15900 4107d873f52c199d1d46cf647cdea16c 333 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 17 312 6.6E-101 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS15900 4107d873f52c199d1d46cf647cdea16c 333 Gene3D G3DSA:3.40.190.10 15 121 1.1E-46 T 23-04-2016 RR42_RS15900 4107d873f52c199d1d46cf647cdea16c 333 SUPERFAMILY SSF53850 15 229 4.23E-79 T 23-04-2016 RR42_RS15900 4107d873f52c199d1d46cf647cdea16c 333 PIRSF PIRSF001438 1 328 4.7E-113 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS15900 4107d873f52c199d1d46cf647cdea16c 333 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 237 312 2.4E-13 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS15900 4107d873f52c199d1d46cf647cdea16c 333 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 242 258 - T 23-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS15900 4107d873f52c199d1d46cf647cdea16c 333 Gene3D G3DSA:3.30.160.40 232 321 4.8E-23 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS15900 4107d873f52c199d1d46cf647cdea16c 333 SUPERFAMILY SSF54782 231 323 1.96E-21 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS15900 4107d873f52c199d1d46cf647cdea16c 333 Gene3D G3DSA:3.40.190.10 122 210 2.0E-37 T 23-04-2016 RR42_RS15900 4107d873f52c199d1d46cf647cdea16c 333 PANTHER PTHR11557 1 323 6.8E-140 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS15900 4107d873f52c199d1d46cf647cdea16c 333 PANTHER PTHR11557:SF0 1 323 6.8E-140 T 23-04-2016 RR42_RS06105 1864e540dae85fae5a7f9080d8da4b3d 249 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS06105 1864e540dae85fae5a7f9080d8da4b3d 249 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 28 246 3.9E-93 T 23-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 RR42_RS06105 1864e540dae85fae5a7f9080d8da4b3d 249 PANTHER PTHR24220 29 248 2.2E-108 T 23-04-2016 RR42_RS06105 1864e540dae85fae5a7f9080d8da4b3d 249 SUPERFAMILY SSF52540 28 247 5.32E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS06105 1864e540dae85fae5a7f9080d8da4b3d 249 Pfam PF00005 ABC transporter 47 195 3.2E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS06105 1864e540dae85fae5a7f9080d8da4b3d 249 SMART SM00382 56 244 7.9E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS06105 1864e540dae85fae5a7f9080d8da4b3d 249 PANTHER PTHR24220:SF111 29 248 2.2E-108 T 23-04-2016 RR42_RS06105 1864e540dae85fae5a7f9080d8da4b3d 249 Gene3D G3DSA:3.40.50.300 26 246 7.1E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS00525 156caf8996b6a68e2d164987bdd0f5a1 194 SUPERFAMILY SSF46785 28 168 1.08E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS00525 156caf8996b6a68e2d164987bdd0f5a1 194 Pfam PF12802 MarR family 58 116 3.6E-11 T 23-04-2016 RR42_RS00525 156caf8996b6a68e2d164987bdd0f5a1 194 PANTHER PTHR33164 4 176 8.7E-20 T 23-04-2016 RR42_RS00525 156caf8996b6a68e2d164987bdd0f5a1 194 SMART SM00347 52 152 1.7E-14 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS00525 156caf8996b6a68e2d164987bdd0f5a1 194 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 108 3.1E-5 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS00525 156caf8996b6a68e2d164987bdd0f5a1 194 PRINTS PR00598 Bacterial regulatory protein MarR family signature 142 162 3.1E-5 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS00525 156caf8996b6a68e2d164987bdd0f5a1 194 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 128 3.1E-5 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS00525 156caf8996b6a68e2d164987bdd0f5a1 194 Gene3D G3DSA:1.10.10.10 26 166 1.4E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS03490 669152af0273cc94e824f01be05cc493 346 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 26 325 1.2E-91 T 23-04-2016 IPR010732 Type VI secretion, TssG-like RR42_RS03490 669152af0273cc94e824f01be05cc493 346 PANTHER PTHR35564:SF1 22 342 6.3E-139 T 23-04-2016 RR42_RS03490 669152af0273cc94e824f01be05cc493 346 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 27 325 8.8E-95 T 23-04-2016 IPR010732 Type VI secretion, TssG-like RR42_RS03490 669152af0273cc94e824f01be05cc493 346 PANTHER PTHR35564 22 342 6.3E-139 T 23-04-2016 RR42_RS10070 b527efcc7c4433cdd42a1cd5ca4c167e 316 Gene3D G3DSA:3.20.20.70 3 295 1.2E-60 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS10070 b527efcc7c4433cdd42a1cd5ca4c167e 316 Pfam PF03060 Nitronate monooxygenase 6 74 7.0E-21 T 23-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 RR42_RS10070 b527efcc7c4433cdd42a1cd5ca4c167e 316 Pfam PF03060 Nitronate monooxygenase 83 297 5.8E-38 T 23-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 RR42_RS10070 b527efcc7c4433cdd42a1cd5ca4c167e 316 PANTHER PTHR32332:SF20 2 316 1.8E-87 T 23-04-2016 RR42_RS10070 b527efcc7c4433cdd42a1cd5ca4c167e 316 SUPERFAMILY SSF51412 3 303 1.16E-59 T 23-04-2016 RR42_RS10070 b527efcc7c4433cdd42a1cd5ca4c167e 316 PANTHER PTHR32332 2 316 1.8E-87 T 23-04-2016 RR42_RS00285 c8a0b2961b8e7bfaba3002ebe2a5384b 89 Gene3D G3DSA:3.10.20.30 5 86 1.4E-14 T 23-04-2016 IPR012675 Beta-grasp domain RR42_RS00285 c8a0b2961b8e7bfaba3002ebe2a5384b 89 PANTHER PTHR38031 1 89 5.2E-12 T 23-04-2016 RR42_RS00285 c8a0b2961b8e7bfaba3002ebe2a5384b 89 SUPERFAMILY SSF54285 4 89 9.94E-13 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RR42_RS00285 c8a0b2961b8e7bfaba3002ebe2a5384b 89 PANTHER PTHR38031:SF1 1 89 5.2E-12 T 23-04-2016 RR42_RS18835 a2e9840acb220cedfed0a6323573dffb 248 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 247 5.2E-57 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RR42_RS18835 a2e9840acb220cedfed0a6323573dffb 248 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 9 235 1.1E-53 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RR42_RS18835 a2e9840acb220cedfed0a6323573dffb 248 PANTHER PTHR13799 1 244 2.2E-65 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RR42_RS18835 a2e9840acb220cedfed0a6323573dffb 248 Gene3D G3DSA:3.40.1390.30 109 215 4.5E-28 T 23-04-2016 RR42_RS18835 a2e9840acb220cedfed0a6323573dffb 248 Gene3D G3DSA:3.40.1390.30 1 108 3.2E-33 T 23-04-2016 RR42_RS18835 a2e9840acb220cedfed0a6323573dffb 248 SUPERFAMILY SSF102705 1 247 6.8E-77 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RR42_RS15020 e8bfa43543af10396a393bdcbc4ce784 367 Pfam PF00355 Rieske [2Fe-2S] domain 43 120 1.1E-11 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RR42_RS15020 e8bfa43543af10396a393bdcbc4ce784 367 SUPERFAMILY SSF50022 5 140 2.88E-34 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RR42_RS15020 e8bfa43543af10396a393bdcbc4ce784 367 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 162 364 6.0E-36 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 RR42_RS15020 e8bfa43543af10396a393bdcbc4ce784 367 PANTHER PTHR21266:SF2 15 363 2.5E-46 T 23-04-2016 RR42_RS15020 e8bfa43543af10396a393bdcbc4ce784 367 SUPERFAMILY SSF55961 159 363 5.57E-46 T 23-04-2016 RR42_RS15020 e8bfa43543af10396a393bdcbc4ce784 367 PANTHER PTHR21266 15 363 2.5E-46 T 23-04-2016 RR42_RS15020 e8bfa43543af10396a393bdcbc4ce784 367 Gene3D G3DSA:3.90.380.10 172 361 8.0E-12 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 RR42_RS15020 e8bfa43543af10396a393bdcbc4ce784 367 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 94 114 6.1E-7 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RR42_RS15020 e8bfa43543af10396a393bdcbc4ce784 367 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 24 49 6.1E-7 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RR42_RS15020 e8bfa43543af10396a393bdcbc4ce784 367 Gene3D G3DSA:2.102.10.10 42 143 1.4E-24 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RR42_RS14455 b9b4464b7a3e71e59b27eb79acead2a0 135 SUPERFAMILY SSF81343 8 131 1.59E-25 T 23-04-2016 RR42_RS14455 b9b4464b7a3e71e59b27eb79acead2a0 135 PANTHER PTHR10978 19 123 5.0E-15 T 23-04-2016 RR42_RS14455 b9b4464b7a3e71e59b27eb79acead2a0 135 PIRSF PIRSF000178 1 132 4.7E-28 T 23-04-2016 RR42_RS14455 b9b4464b7a3e71e59b27eb79acead2a0 135 Gene3D G3DSA:1.20.1300.10 3 132 5.1E-34 T 23-04-2016 RR42_RS14455 b9b4464b7a3e71e59b27eb79acead2a0 135 PANTHER PTHR10978:SF4 19 123 5.0E-15 T 23-04-2016 RR42_RS14455 b9b4464b7a3e71e59b27eb79acead2a0 135 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 8 129 2.1E-34 T 23-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 RR42_RS14455 b9b4464b7a3e71e59b27eb79acead2a0 135 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 18 126 1.5E-23 T 23-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 RR42_RS20210 b6f2a98ec2c5d4799d9580173d121613 235 Gene3D G3DSA:3.40.50.150 10 234 8.5E-65 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS20210 b6f2a98ec2c5d4799d9580173d121613 235 SUPERFAMILY SSF53335 20 233 6.11E-38 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS20210 b6f2a98ec2c5d4799d9580173d121613 235 PANTHER PTHR31760 1 232 9.8E-63 T 23-04-2016 RR42_RS20210 b6f2a98ec2c5d4799d9580173d121613 235 PANTHER PTHR31760:SF0 1 232 9.8E-63 T 23-04-2016 RR42_RS20210 b6f2a98ec2c5d4799d9580173d121613 235 PIRSF PIRSF003078 12 235 1.7E-53 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RR42_RS20210 b6f2a98ec2c5d4799d9580173d121613 235 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 39 233 1.3E-44 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RR42_RS20210 b6f2a98ec2c5d4799d9580173d121613 235 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 26 231 25.628 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RR42_RS20210 b6f2a98ec2c5d4799d9580173d121613 235 Pfam PF02527 rRNA small subunit methyltransferase G 33 228 3.2E-44 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RR42_RS16835 e3088950bac1b9d356b0768b78b0f37c 289 Gene3D G3DSA:3.40.50.720 1 165 4.5E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS16835 e3088950bac1b9d356b0768b78b0f37c 289 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 167 287 1.4E-24 T 23-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 RR42_RS16835 e3088950bac1b9d356b0768b78b0f37c 289 SUPERFAMILY SSF51735 4 165 7.32E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS16835 e3088950bac1b9d356b0768b78b0f37c 289 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 8 21 - T 23-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 RR42_RS16835 e3088950bac1b9d356b0768b78b0f37c 289 Gene3D G3DSA:1.10.1040.10 167 288 2.7E-34 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RR42_RS16835 e3088950bac1b9d356b0768b78b0f37c 289 PANTHER PTHR22981 2 288 3.5E-98 T 23-04-2016 RR42_RS16835 e3088950bac1b9d356b0768b78b0f37c 289 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 164 4.4E-49 T 23-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 RR42_RS16835 e3088950bac1b9d356b0768b78b0f37c 289 SUPERFAMILY SSF48179 165 288 5.78E-32 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RR42_RS16835 e3088950bac1b9d356b0768b78b0f37c 289 PIRSF PIRSF000103 1 289 9.3E-69 T 23-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 RR42_RS12475 17068402bc7b08d16aae5976529af004 358 PANTHER PTHR30482:SF2 3 306 1.0E-114 T 23-04-2016 RR42_RS12475 17068402bc7b08d16aae5976529af004 358 PANTHER PTHR30482:SF2 322 352 1.0E-114 T 23-04-2016 RR42_RS12475 17068402bc7b08d16aae5976529af004 358 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 308 5.4E-34 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RR42_RS12475 17068402bc7b08d16aae5976529af004 358 PANTHER PTHR30482 3 306 1.0E-114 T 23-04-2016 RR42_RS12475 17068402bc7b08d16aae5976529af004 358 PANTHER PTHR30482 322 352 1.0E-114 T 23-04-2016 RR42_RS14165 7cb58a50141da6468ad081402e77d195 374 SMART SM00729 43 257 6.5E-11 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RR42_RS14165 7cb58a50141da6468ad081402e77d195 374 Pfam PF06463 Molybdenum Cofactor Synthesis C 224 350 6.0E-37 T 23-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 RR42_RS14165 7cb58a50141da6468ad081402e77d195 374 Gene3D G3DSA:3.20.20.70 36 338 3.9E-77 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS14165 7cb58a50141da6468ad081402e77d195 374 PANTHER PTHR22960 36 322 8.0E-115 T 23-04-2016 RR42_RS14165 7cb58a50141da6468ad081402e77d195 374 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 49 60 - T 23-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 RR42_RS14165 7cb58a50141da6468ad081402e77d195 374 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 35 374 9.6E-117 T 23-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 RR42_RS14165 7cb58a50141da6468ad081402e77d195 374 Pfam PF13353 4Fe-4S single cluster domain 51 137 3.5E-9 T 23-04-2016 RR42_RS14165 7cb58a50141da6468ad081402e77d195 374 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 34 374 40.715 T 23-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 RR42_RS14165 7cb58a50141da6468ad081402e77d195 374 Pfam PF04055 Radical SAM superfamily 47 214 2.5E-30 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RR42_RS14165 7cb58a50141da6468ad081402e77d195 374 SUPERFAMILY SSF102114 36 335 4.84E-78 T 23-04-2016 RR42_RS04455 a2117a5aeefe59414de1819653b27616 386 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 21 383 6.5E-144 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 RR42_RS04455 a2117a5aeefe59414de1819653b27616 386 PIRSF PIRSF000525 15 386 2.0E-145 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 RR42_RS04455 a2117a5aeefe59414de1819653b27616 386 Gene3D G3DSA:3.90.1150.10 284 383 1.4E-39 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS04455 a2117a5aeefe59414de1819653b27616 386 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 19 385 48.598 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 RR42_RS04455 a2117a5aeefe59414de1819653b27616 386 PANTHER PTHR21152:SF1 12 383 5.9E-175 T 23-04-2016 RR42_RS04455 a2117a5aeefe59414de1819653b27616 386 Pfam PF00266 Aminotransferase class-V 21 374 1.4E-50 T 23-04-2016 IPR000192 Aminotransferase class V domain RR42_RS04455 a2117a5aeefe59414de1819653b27616 386 PANTHER PTHR21152 12 383 5.9E-175 T 23-04-2016 RR42_RS04455 a2117a5aeefe59414de1819653b27616 386 SUPERFAMILY SSF53383 20 383 7.23E-112 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS04455 a2117a5aeefe59414de1819653b27616 386 Gene3D G3DSA:3.40.640.10 33 283 1.9E-103 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS14245 0ce5fffa25d97adba260c21b3f59ab52 83 SUPERFAMILY SSF56235 18 74 2.39E-9 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RR42_RS14245 0ce5fffa25d97adba260c21b3f59ab52 83 PANTHER PTHR34218:SF3 21 83 2.5E-15 T 23-04-2016 RR42_RS14245 0ce5fffa25d97adba260c21b3f59ab52 83 PANTHER PTHR34218 21 83 2.5E-15 T 23-04-2016 RR42_RS14245 0ce5fffa25d97adba260c21b3f59ab52 83 Pfam PF01804 Penicillin amidase 21 71 8.2E-9 T 23-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 RR42_RS20135 f5f349361ab0e131abe2f9bc26dfd5ee 365 Gene3D G3DSA:3.20.20.210 3 360 5.5E-144 T 23-04-2016 RR42_RS20135 f5f349361ab0e131abe2f9bc26dfd5ee 365 PANTHER PTHR21091 3 361 2.0E-137 T 23-04-2016 RR42_RS20135 f5f349361ab0e131abe2f9bc26dfd5ee 365 SUPERFAMILY SSF51726 3 359 6.28E-112 T 23-04-2016 RR42_RS20135 f5f349361ab0e131abe2f9bc26dfd5ee 365 PANTHER PTHR21091:SF2 3 361 2.0E-137 T 23-04-2016 RR42_RS20135 f5f349361ab0e131abe2f9bc26dfd5ee 365 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 24 33 - T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RR42_RS20135 f5f349361ab0e131abe2f9bc26dfd5ee 365 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 11 354 2.9E-122 T 23-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RR42_RS20135 f5f349361ab0e131abe2f9bc26dfd5ee 365 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 147 163 - T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RR42_RS20135 f5f349361ab0e131abe2f9bc26dfd5ee 365 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 8 357 48.745 T 23-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RR42_RS20135 f5f349361ab0e131abe2f9bc26dfd5ee 365 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 7 356 2.0E-131 T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RR42_RS12290 29ae38687b7733ef2084bf605d6d7d8b 387 Gene3D G3DSA:3.20.20.30 1 255 1.3E-102 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RR42_RS12290 29ae38687b7733ef2084bf605d6d7d8b 387 Gene3D G3DSA:3.20.20.30 293 358 1.3E-102 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RR42_RS12290 29ae38687b7733ef2084bf605d6d7d8b 387 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 2 386 68.697 T 23-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 RR42_RS12290 29ae38687b7733ef2084bf605d6d7d8b 387 SUPERFAMILY SSF51679 1 357 2.22E-93 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RR42_RS12290 29ae38687b7733ef2084bf605d6d7d8b 387 PANTHER PTHR30011 1 383 4.9E-188 T 23-04-2016 RR42_RS12290 29ae38687b7733ef2084bf605d6d7d8b 387 PANTHER PTHR30011:SF1 1 383 4.9E-188 T 23-04-2016 RR42_RS12290 29ae38687b7733ef2084bf605d6d7d8b 387 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 2 355 1.2E-187 T 23-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 RR42_RS12290 29ae38687b7733ef2084bf605d6d7d8b 387 Pfam PF00296 Luciferase-like monooxygenase 1 331 7.2E-85 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RR42_RS02495 837b1fbf17e421a5cd61c4f52cd8071e 439 PANTHER PTHR21248 39 436 2.5E-65 T 23-04-2016 RR42_RS02495 837b1fbf17e421a5cd61c4f52cd8071e 439 Gene3D G3DSA:3.30.870.10 45 212 1.1E-34 T 23-04-2016 RR42_RS02495 837b1fbf17e421a5cd61c4f52cd8071e 439 Gene3D G3DSA:3.30.870.10 261 425 1.2E-33 T 23-04-2016 RR42_RS02495 837b1fbf17e421a5cd61c4f52cd8071e 439 Pfam PF13091 PLD-like domain 269 394 3.2E-23 T 23-04-2016 IPR025202 Phospholipase D-like domain RR42_RS02495 837b1fbf17e421a5cd61c4f52cd8071e 439 Pfam PF13091 PLD-like domain 64 180 4.1E-12 T 23-04-2016 IPR025202 Phospholipase D-like domain RR42_RS02495 837b1fbf17e421a5cd61c4f52cd8071e 439 SMART SM00155 341 368 0.0041 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 RR42_RS02495 837b1fbf17e421a5cd61c4f52cd8071e 439 SMART SM00155 147 174 0.009 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 RR42_RS02495 837b1fbf17e421a5cd61c4f52cd8071e 439 SUPERFAMILY SSF56024 244 403 8.3E-35 T 23-04-2016 RR42_RS02495 837b1fbf17e421a5cd61c4f52cd8071e 439 Hamap MF_01917 Cardiolipin synthase B [clsB]. 42 439 45.626 T 23-04-2016 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 RR42_RS02495 837b1fbf17e421a5cd61c4f52cd8071e 439 SUPERFAMILY SSF56024 39 212 6.54E-40 T 23-04-2016 RR42_RS30415 26c80c792ba99eb656c636f91767785e 95 PANTHER PTHR23309 27 95 6.4E-19 T 23-04-2016 RR42_RS30415 26c80c792ba99eb656c636f91767785e 95 SUPERFAMILY SSF52096 30 93 9.64E-16 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS30415 26c80c792ba99eb656c636f91767785e 95 PANTHER PTHR23309:SF9 27 95 6.4E-19 T 23-04-2016 RR42_RS30415 26c80c792ba99eb656c636f91767785e 95 Pfam PF00378 Enoyl-CoA hydratase/isomerase 36 92 6.1E-9 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RR42_RS30415 26c80c792ba99eb656c636f91767785e 95 Gene3D G3DSA:3.90.226.10 28 93 4.6E-15 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS01210 1003e8a0b95111083d5b2696260b642d 315 SUPERFAMILY SSF55347 116 288 1.02E-36 T 23-04-2016 RR42_RS01210 1003e8a0b95111083d5b2696260b642d 315 SMART SM00859 4 105 6.3E-17 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RR42_RS01210 1003e8a0b95111083d5b2696260b642d 315 PANTHER PTHR32338:SF9 4 313 9.6E-98 T 23-04-2016 RR42_RS01210 1003e8a0b95111083d5b2696260b642d 315 Gene3D G3DSA:3.40.50.720 35 124 3.5E-19 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS01210 1003e8a0b95111083d5b2696260b642d 315 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 3 306 7.7E-141 T 23-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RR42_RS01210 1003e8a0b95111083d5b2696260b642d 315 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 307 51.663 T 23-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RR42_RS01210 1003e8a0b95111083d5b2696260b642d 315 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 42 101 8.6E-10 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RR42_RS01210 1003e8a0b95111083d5b2696260b642d 315 PANTHER PTHR32338 4 313 9.6E-98 T 23-04-2016 RR42_RS01210 1003e8a0b95111083d5b2696260b642d 315 SUPERFAMILY SSF51735 1 137 7.37E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS01210 1003e8a0b95111083d5b2696260b642d 315 Gene3D G3DSA:3.30.360.10 125 288 1.5E-36 T 23-04-2016 RR42_RS09900 8ff886d1c1909044b31a493dd1667a16 358 Gene3D G3DSA:2.40.160.10 48 358 6.5E-64 T 23-04-2016 IPR023614 Porin domain RR42_RS09900 8ff886d1c1909044b31a493dd1667a16 358 SUPERFAMILY SSF56935 48 358 4.27E-56 T 23-04-2016 RR42_RS09900 8ff886d1c1909044b31a493dd1667a16 358 Pfam PF13609 Gram-negative porin 33 338 1.8E-37 T 23-04-2016 RR42_RS00795 461c75041e5e81de9153eac5a8384873 47 Pfam PF08085 Entericidin EcnA/B family 20 40 3.3E-9 T 23-04-2016 IPR012556 Entericidin A/B GO:0009636|GO:0016020 RR42_RS19150 d42d46cf1007ef5205a9f2b839b6a765 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 7.9E-27 T 23-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 RR42_RS19150 d42d46cf1007ef5205a9f2b839b6a765 72 SUPERFAMILY SSF50249 1 70 5.14E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS19150 d42d46cf1007ef5205a9f2b839b6a765 72 Gene3D G3DSA:2.40.50.140 1 72 1.6E-37 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS19150 d42d46cf1007ef5205a9f2b839b6a765 72 PANTHER PTHR33370 1 72 3.8E-47 T 23-04-2016 RR42_RS19150 d42d46cf1007ef5205a9f2b839b6a765 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.995 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RR42_RS19150 d42d46cf1007ef5205a9f2b839b6a765 72 SMART SM00316 2 72 0.0022 T 23-04-2016 IPR022967 RNA-binding domain, S1 RR42_RS19150 d42d46cf1007ef5205a9f2b839b6a765 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 3.1E-36 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RR42_RS15405 b23ee16763ea31b345787d64dc1d607c 212 PANTHER PTHR10681:SF99 3 207 1.3E-96 T 23-04-2016 RR42_RS15405 b23ee16763ea31b345787d64dc1d607c 212 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 191 5.5E-10 T 23-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RR42_RS15405 b23ee16763ea31b345787d64dc1d607c 212 SUPERFAMILY SSF52833 3 209 2.4E-69 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS15405 b23ee16763ea31b345787d64dc1d607c 212 PIRSF PIRSF000239 1 209 5.9E-79 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 RR42_RS15405 b23ee16763ea31b345787d64dc1d607c 212 Gene3D G3DSA:3.40.30.10 4 157 2.2E-61 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS15405 b23ee16763ea31b345787d64dc1d607c 212 Pfam PF00578 AhpC/TSA family 6 134 9.9E-31 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 RR42_RS15405 b23ee16763ea31b345787d64dc1d607c 212 PANTHER PTHR10681 3 207 1.3E-96 T 23-04-2016 RR42_RS15405 b23ee16763ea31b345787d64dc1d607c 212 Gene3D G3DSA:3.30.1020.10 158 211 1.6E-27 T 23-04-2016 RR42_RS16825 050fab9b695b029fdef22cbe2d09839e 337 PANTHER PTHR11019 186 332 2.8E-27 T 23-04-2016 RR42_RS16825 050fab9b695b029fdef22cbe2d09839e 337 PANTHER PTHR11019:SF52 186 332 2.8E-27 T 23-04-2016 RR42_RS16825 050fab9b695b029fdef22cbe2d09839e 337 Gene3D G3DSA:1.10.10.60 284 333 1.2E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS16825 050fab9b695b029fdef22cbe2d09839e 337 SMART SM00342 248 331 1.9E-15 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RR42_RS16825 050fab9b695b029fdef22cbe2d09839e 337 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 24 206 1.7E-36 T 23-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal RR42_RS16825 050fab9b695b029fdef22cbe2d09839e 337 Pfam PF12833 Helix-turn-helix domain 256 332 1.9E-14 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RR42_RS16825 050fab9b695b029fdef22cbe2d09839e 337 SUPERFAMILY SSF46689 284 333 1.29E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS05740 349b492ac265b47457a78b5c774b2ce8 335 PIRSF PIRSF017082 3 335 6.5E-70 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS05740 349b492ac265b47457a78b5c774b2ce8 335 SUPERFAMILY SSF53850 122 295 2.17E-9 T 23-04-2016 RR42_RS05740 349b492ac265b47457a78b5c774b2ce8 335 PANTHER PTHR30349:SF1 23 297 7.1E-70 T 23-04-2016 RR42_RS05740 349b492ac265b47457a78b5c774b2ce8 335 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 60 330 1.1E-67 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS05740 349b492ac265b47457a78b5c774b2ce8 335 PANTHER PTHR30349 23 297 7.1E-70 T 23-04-2016 RR42_RS06350 e858c31879daab00e79abbef20e11ad5 462 SUPERFAMILY SSF52374 5 318 1.43E-97 T 23-04-2016 RR42_RS06350 e858c31879daab00e79abbef20e11ad5 462 Pfam PF09190 DALR domain 347 402 1.6E-14 T 23-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 RR42_RS06350 e858c31879daab00e79abbef20e11ad5 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 63 72 1.5E-29 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RR42_RS06350 e858c31879daab00e79abbef20e11ad5 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 27 38 1.5E-29 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RR42_RS06350 e858c31879daab00e79abbef20e11ad5 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 196 214 1.5E-29 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RR42_RS06350 e858c31879daab00e79abbef20e11ad5 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 227 248 1.5E-29 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RR42_RS06350 e858c31879daab00e79abbef20e11ad5 462 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 4 461 38.779 T 23-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 RR42_RS06350 e858c31879daab00e79abbef20e11ad5 462 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 4 461 5.3E-168 T 23-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 RR42_RS06350 e858c31879daab00e79abbef20e11ad5 462 PANTHER PTHR10890 4 462 8.4E-226 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RR42_RS06350 e858c31879daab00e79abbef20e11ad5 462 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 17 318 4.7E-129 T 23-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 RR42_RS06350 e858c31879daab00e79abbef20e11ad5 462 SMART SM00840 347 402 5.4E-20 T 23-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 RR42_RS06350 e858c31879daab00e79abbef20e11ad5 462 Gene3D G3DSA:3.40.50.620 21 310 2.7E-108 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS06350 e858c31879daab00e79abbef20e11ad5 462 Gene3D G3DSA:1.20.120.640 313 391 5.9E-19 T 23-04-2016 RR42_RS06350 e858c31879daab00e79abbef20e11ad5 462 SUPERFAMILY SSF47323 321 460 9.15E-35 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS06960 9228106a105498225532e58a08501e67 227 SUPERFAMILY SSF56300 10 211 2.53E-37 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS06960 9228106a105498225532e58a08501e67 227 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 71 76 - T 23-04-2016 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 RR42_RS06960 9228106a105498225532e58a08501e67 227 Gene3D G3DSA:3.60.21.10 11 218 1.0E-35 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS06960 9228106a105498225532e58a08501e67 227 Pfam PF00149 Calcineurin-like phosphoesterase 16 122 2.1E-10 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RR42_RS06960 9228106a105498225532e58a08501e67 227 PANTHER PTHR24032 1 125 7.9E-23 T 23-04-2016 RR42_RS17395 ec5370a221b3d9e2bcffde58c9052ca2 350 PANTHER PTHR30307:SF0 4 349 4.0E-163 T 23-04-2016 RR42_RS17395 ec5370a221b3d9e2bcffde58c9052ca2 350 Pfam PF02547 Queuosine biosynthesis protein 4 342 7.2E-130 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 RR42_RS17395 ec5370a221b3d9e2bcffde58c9052ca2 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 2 343 45.936 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 RR42_RS17395 ec5370a221b3d9e2bcffde58c9052ca2 350 Gene3D G3DSA:2.40.10.240 69 136 1.9E-10 T 23-04-2016 RR42_RS17395 ec5370a221b3d9e2bcffde58c9052ca2 350 Gene3D G3DSA:3.40.1780.10 180 342 2.8E-98 T 23-04-2016 RR42_RS17395 ec5370a221b3d9e2bcffde58c9052ca2 350 Gene3D G3DSA:3.40.1780.10 3 67 2.8E-98 T 23-04-2016 RR42_RS17395 ec5370a221b3d9e2bcffde58c9052ca2 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 3 342 1.3E-126 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 RR42_RS17395 ec5370a221b3d9e2bcffde58c9052ca2 350 PANTHER PTHR30307 4 349 4.0E-163 T 23-04-2016 RR42_RS17395 ec5370a221b3d9e2bcffde58c9052ca2 350 SUPERFAMILY SSF111337 3 342 8.11E-130 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 RR42_RS03920 bd0b928ab2684fe82744f3428d5b6d20 58 SUPERFAMILY SSF57802 4 54 8.75E-21 T 23-04-2016 RR42_RS03920 bd0b928ab2684fe82744f3428d5b6d20 58 ProSitePatterns PS00202 Rubredoxin signature. 36 46 - T 23-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 RR42_RS03920 bd0b928ab2684fe82744f3428d5b6d20 58 Pfam PF00301 Rubredoxin 6 52 2.4E-22 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 RR42_RS03920 bd0b928ab2684fe82744f3428d5b6d20 58 Gene3D G3DSA:2.20.28.10 3 54 3.1E-24 T 23-04-2016 IPR004039 Rubredoxin-type fold RR42_RS03920 bd0b928ab2684fe82744f3428d5b6d20 58 PRINTS PR00163 Rubredoxin signature 6 22 3.5E-9 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 RR42_RS03920 bd0b928ab2684fe82744f3428d5b6d20 58 PRINTS PR00163 Rubredoxin signature 36 52 3.5E-9 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 RR42_RS11170 80a1d25de9b4087bf98383615a7b3432 179 Pfam PF04279 Intracellular septation protein A 1 175 1.0E-73 T 23-04-2016 IPR006008 Intracellular septation protein A GO:0016021 RR42_RS11170 80a1d25de9b4087bf98383615a7b3432 179 PANTHER PTHR36917 1 175 2.3E-64 T 23-04-2016 RR42_RS11170 80a1d25de9b4087bf98383615a7b3432 179 PANTHER PTHR36917:SF1 1 175 2.3E-64 T 23-04-2016 RR42_RS11170 80a1d25de9b4087bf98383615a7b3432 179 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 176 5.8E-62 T 23-04-2016 IPR006008 Intracellular septation protein A GO:0016021 RR42_RS11170 80a1d25de9b4087bf98383615a7b3432 179 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 19.653 T 23-04-2016 IPR006008 Intracellular septation protein A GO:0016021 RR42_RS02225 4fd0646df400fa0d063f819600cf0ace 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 54 323 1.4E-72 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS02225 4fd0646df400fa0d063f819600cf0ace 327 PANTHER PTHR30349:SF16 16 324 1.1E-75 T 23-04-2016 RR42_RS02225 4fd0646df400fa0d063f819600cf0ace 327 PIRSF PIRSF017082 2 327 1.6E-77 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS02225 4fd0646df400fa0d063f819600cf0ace 327 SUPERFAMILY SSF53850 116 280 1.09E-13 T 23-04-2016 RR42_RS02225 4fd0646df400fa0d063f819600cf0ace 327 PANTHER PTHR30349 16 324 1.1E-75 T 23-04-2016 RR42_RS11845 ca7a077fcecc16d69d15c92f5613069b 392 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 385 47.476 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RR42_RS11845 ca7a077fcecc16d69d15c92f5613069b 392 Gene3D G3DSA:1.10.1740.10 306 387 7.5E-32 T 23-04-2016 RR42_RS11845 ca7a077fcecc16d69d15c92f5613069b 392 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 1.1E-45 T 23-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RR42_RS11845 ca7a077fcecc16d69d15c92f5613069b 392 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 232 6.9E-38 T 23-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RR42_RS11845 ca7a077fcecc16d69d15c92f5613069b 392 Pfam PF13288 DXP reductoisomerase C-terminal domain 264 380 5.4E-44 T 23-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RR42_RS11845 ca7a077fcecc16d69d15c92f5613069b 392 Gene3D G3DSA:3.40.50.720 1 150 1.3E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS11845 ca7a077fcecc16d69d15c92f5613069b 392 SUPERFAMILY SSF69055 295 383 3.01E-31 T 23-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RR42_RS11845 ca7a077fcecc16d69d15c92f5613069b 392 PANTHER PTHR30525 1 382 2.5E-222 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RR42_RS11845 ca7a077fcecc16d69d15c92f5613069b 392 SUPERFAMILY SSF51735 2 150 3.15E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS11845 ca7a077fcecc16d69d15c92f5613069b 392 SUPERFAMILY SSF55347 126 267 1.37E-60 T 23-04-2016 RR42_RS11845 ca7a077fcecc16d69d15c92f5613069b 392 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 382 8.6E-156 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RR42_RS11845 ca7a077fcecc16d69d15c92f5613069b 392 PIRSF PIRSF006205 1 391 2.6E-154 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RR42_RS05265 9d96e9ec8ce36bbf2e608a840542e071 247 SUPERFAMILY SSF48008 96 229 2.17E-27 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS05265 9d96e9ec8ce36bbf2e608a840542e071 247 SUPERFAMILY SSF46785 22 94 8.35E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS05265 9d96e9ec8ce36bbf2e608a840542e071 247 Gene3D G3DSA:1.20.120.530 93 229 5.9E-32 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS05265 9d96e9ec8ce36bbf2e608a840542e071 247 SMART SM00345 32 90 0.0044 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS05265 9d96e9ec8ce36bbf2e608a840542e071 247 SMART SM00895 100 224 5.7E-18 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS05265 9d96e9ec8ce36bbf2e608a840542e071 247 Gene3D G3DSA:1.10.10.10 16 91 8.9E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS05265 9d96e9ec8ce36bbf2e608a840542e071 247 PANTHER PTHR11751 27 116 2.7E-23 T 23-04-2016 RR42_RS05265 9d96e9ec8ce36bbf2e608a840542e071 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 30 90 4.4E-12 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS05265 9d96e9ec8ce36bbf2e608a840542e071 247 Pfam PF07729 FCD domain 100 222 2.3E-24 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS12815 08cc171fb14df9fed8c7eb3ba6e39528 159 Pfam PF01047 MarR family 50 108 5.6E-15 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS12815 08cc171fb14df9fed8c7eb3ba6e39528 159 PANTHER PTHR33164 26 157 8.4E-26 T 23-04-2016 RR42_RS12815 08cc171fb14df9fed8c7eb3ba6e39528 159 PANTHER PTHR33164:SF16 26 157 8.4E-26 T 23-04-2016 RR42_RS12815 08cc171fb14df9fed8c7eb3ba6e39528 159 SUPERFAMILY SSF46785 22 156 2.37E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS12815 08cc171fb14df9fed8c7eb3ba6e39528 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 103 119 5.1E-11 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS12815 08cc171fb14df9fed8c7eb3ba6e39528 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 133 153 5.1E-11 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS12815 08cc171fb14df9fed8c7eb3ba6e39528 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 83 5.1E-11 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS12815 08cc171fb14df9fed8c7eb3ba6e39528 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 99 5.1E-11 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS12815 08cc171fb14df9fed8c7eb3ba6e39528 159 ProSitePatterns PS01117 MarR-type HTH domain signature. 82 116 - T 23-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site RR42_RS12815 08cc171fb14df9fed8c7eb3ba6e39528 159 SMART SM00347 43 143 2.5E-22 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS12815 08cc171fb14df9fed8c7eb3ba6e39528 159 Gene3D G3DSA:1.10.10.10 24 156 4.0E-37 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS16095 129318cbfaf981b77cbedc6932bfccac 307 SUPERFAMILY SSF53807 25 295 3.49E-68 T 23-04-2016 RR42_RS16095 129318cbfaf981b77cbedc6932bfccac 307 Pfam PF01497 Periplasmic binding protein 49 276 3.0E-27 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RR42_RS16095 129318cbfaf981b77cbedc6932bfccac 307 PANTHER PTHR30535:SF5 30 297 1.6E-56 T 23-04-2016 RR42_RS16095 129318cbfaf981b77cbedc6932bfccac 307 PANTHER PTHR30535 30 297 1.6E-56 T 23-04-2016 RR42_RS16095 129318cbfaf981b77cbedc6932bfccac 307 Gene3D G3DSA:3.40.50.1980 46 163 2.9E-33 T 23-04-2016 RR42_RS16095 129318cbfaf981b77cbedc6932bfccac 307 Gene3D G3DSA:3.40.50.1980 166 298 7.6E-34 T 23-04-2016 RR42_RS03160 d5c3a08fcd59cbdebbcc419408c9572e 146 SUPERFAMILY SSF54427 8 129 1.67E-23 T 23-04-2016 IPR032710 NTF2-like domain RR42_RS03160 d5c3a08fcd59cbdebbcc419408c9572e 146 Gene3D G3DSA:3.10.450.50 8 131 3.0E-16 T 23-04-2016 IPR032710 NTF2-like domain RR42_RS03160 d5c3a08fcd59cbdebbcc419408c9572e 146 Pfam PF13474 SnoaL-like domain 12 129 6.2E-16 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain RR42_RS15165 4f1db37034ac43f4be5ac19319785dac 340 PANTHER PTHR30349:SF16 17 305 1.0E-91 T 23-04-2016 RR42_RS15165 4f1db37034ac43f4be5ac19319785dac 340 PIRSF PIRSF017082 1 339 1.2E-76 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS15165 4f1db37034ac43f4be5ac19319785dac 340 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 55 333 4.0E-86 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS15165 4f1db37034ac43f4be5ac19319785dac 340 SUPERFAMILY SSF53850 121 303 2.17E-10 T 23-04-2016 RR42_RS15165 4f1db37034ac43f4be5ac19319785dac 340 Gene3D G3DSA:3.20.20.70 148 270 3.6E-6 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS15165 4f1db37034ac43f4be5ac19319785dac 340 PANTHER PTHR30349 17 305 1.0E-91 T 23-04-2016 RR42_RS04495 845417101510746021ed8065428c5b47 165 SMART SM00411 1 91 3.0E-36 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RR42_RS04495 845417101510746021ed8065428c5b47 165 SUPERFAMILY SSF47729 1 92 1.27E-27 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RR42_RS04495 845417101510746021ed8065428c5b47 165 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 28.573 T 23-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 RR42_RS04495 845417101510746021ed8065428c5b47 165 PANTHER PTHR33175:SF5 1 92 1.1E-39 T 23-04-2016 RR42_RS04495 845417101510746021ed8065428c5b47 165 Gene3D G3DSA:4.10.520.10 1 91 5.9E-31 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RR42_RS04495 845417101510746021ed8065428c5b47 165 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 3.8E-16 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RR42_RS04495 845417101510746021ed8065428c5b47 165 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 3.8E-16 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RR42_RS04495 845417101510746021ed8065428c5b47 165 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 3.8E-16 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RR42_RS04495 845417101510746021ed8065428c5b47 165 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 91 8.0E-36 T 23-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 RR42_RS04495 845417101510746021ed8065428c5b47 165 Pfam PF00216 Bacterial DNA-binding protein 1 90 6.9E-26 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RR42_RS04495 845417101510746021ed8065428c5b47 165 PANTHER PTHR33175 1 92 1.1E-39 T 23-04-2016 RR42_RS06355 9fac840b292d4a39fe73498432705371 276 PANTHER PTHR10242 78 267 1.2E-58 T 23-04-2016 RR42_RS06355 9fac840b292d4a39fe73498432705371 276 Gene3D G3DSA:1.10.1670.10 218 272 1.0E-17 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RR42_RS06355 9fac840b292d4a39fe73498432705371 276 SMART SM00478 118 270 2.3E-18 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RR42_RS06355 9fac840b292d4a39fe73498432705371 276 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 115 254 2.6E-14 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RR42_RS06355 9fac840b292d4a39fe73498432705371 276 SUPERFAMILY SSF48150 98 268 8.55E-46 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RR42_RS06355 9fac840b292d4a39fe73498432705371 276 Gene3D G3DSA:1.10.340.30 109 215 3.4E-35 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RR42_RS06355 9fac840b292d4a39fe73498432705371 276 PANTHER PTHR10242:SF0 78 267 1.2E-58 T 23-04-2016 RR42_RS08770 14fd00bc10af4b3fd3cd8dff270feb0d 393 Gene3D G3DSA:3.20.20.70 14 312 8.4E-34 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS08770 14fd00bc10af4b3fd3cd8dff270feb0d 393 PANTHER PTHR32332:SF18 72 375 6.8E-71 T 23-04-2016 RR42_RS08770 14fd00bc10af4b3fd3cd8dff270feb0d 393 PANTHER PTHR32332:SF18 14 49 6.8E-71 T 23-04-2016 RR42_RS08770 14fd00bc10af4b3fd3cd8dff270feb0d 393 Pfam PF03060 Nitronate monooxygenase 15 374 1.9E-31 T 23-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 RR42_RS08770 14fd00bc10af4b3fd3cd8dff270feb0d 393 PANTHER PTHR32332 72 375 6.8E-71 T 23-04-2016 RR42_RS08770 14fd00bc10af4b3fd3cd8dff270feb0d 393 PANTHER PTHR32332 14 49 6.8E-71 T 23-04-2016 RR42_RS08770 14fd00bc10af4b3fd3cd8dff270feb0d 393 SUPERFAMILY SSF51412 338 353 4.88E-30 T 23-04-2016 RR42_RS08770 14fd00bc10af4b3fd3cd8dff270feb0d 393 SUPERFAMILY SSF51412 14 309 4.88E-30 T 23-04-2016 RR42_RS19700 11f98f1a6303c56e778b6ac83d39a841 337 SUPERFAMILY SSF46626 257 335 1.11E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS19700 11f98f1a6303c56e778b6ac83d39a841 337 SUPERFAMILY SSF46626 34 170 1.09E-16 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS19700 11f98f1a6303c56e778b6ac83d39a841 337 Gene3D G3DSA:1.10.760.10 43 153 2.2E-11 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS19700 11f98f1a6303c56e778b6ac83d39a841 337 PRINTS PR00606 Class ID cytochrome C signature 276 289 5.6E-11 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RR42_RS19700 11f98f1a6303c56e778b6ac83d39a841 337 PRINTS PR00606 Class ID cytochrome C signature 313 323 5.6E-11 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RR42_RS19700 11f98f1a6303c56e778b6ac83d39a841 337 PRINTS PR00606 Class ID cytochrome C signature 261 274 5.6E-11 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RR42_RS19700 11f98f1a6303c56e778b6ac83d39a841 337 PRINTS PR00606 Class ID cytochrome C signature 325 335 5.6E-11 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RR42_RS19700 11f98f1a6303c56e778b6ac83d39a841 337 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 257 333 1.6E-5 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS19700 11f98f1a6303c56e778b6ac83d39a841 337 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 56 148 2.1E-6 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS19700 11f98f1a6303c56e778b6ac83d39a841 337 Gene3D G3DSA:1.10.760.10 258 336 3.5E-27 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS07715 113c794292530808f76003644f351738 208 SUPERFAMILY SSF52499 2 204 3.66E-47 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RR42_RS07715 113c794292530808f76003644f351738 208 Gene3D G3DSA:3.40.50.850 5 204 2.1E-38 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RR42_RS07715 113c794292530808f76003644f351738 208 Pfam PF00857 Isochorismatase family 13 163 1.3E-21 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RR42_RS07715 113c794292530808f76003644f351738 208 PANTHER PTHR14119:SF1 1 202 6.8E-108 T 23-04-2016 RR42_RS07715 113c794292530808f76003644f351738 208 PANTHER PTHR14119 1 202 6.8E-108 T 23-04-2016 RR42_RS09640 fa443f9ec793ce0b7a53f847c87e5168 301 SUPERFAMILY SSF53850 91 295 4.97E-20 T 23-04-2016 RR42_RS09640 fa443f9ec793ce0b7a53f847c87e5168 301 Gene3D G3DSA:3.40.190.10 93 176 1.9E-13 T 23-04-2016 RR42_RS09640 fa443f9ec793ce0b7a53f847c87e5168 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.5E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS09640 fa443f9ec793ce0b7a53f847c87e5168 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.5E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS09640 fa443f9ec793ce0b7a53f847c87e5168 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.5E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS09640 fa443f9ec793ce0b7a53f847c87e5168 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.5E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS09640 fa443f9ec793ce0b7a53f847c87e5168 301 Gene3D G3DSA:3.40.190.10 177 262 1.2E-4 T 23-04-2016 RR42_RS09640 fa443f9ec793ce0b7a53f847c87e5168 301 SUPERFAMILY SSF46785 1 81 1.09E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS09640 fa443f9ec793ce0b7a53f847c87e5168 301 PANTHER PTHR30346 1 292 8.0E-55 T 23-04-2016 RR42_RS09640 fa443f9ec793ce0b7a53f847c87e5168 301 Gene3D G3DSA:1.10.10.10 1 84 7.9E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS09640 fa443f9ec793ce0b7a53f847c87e5168 301 Pfam PF03466 LysR substrate binding domain 91 287 2.4E-19 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS09310 7cc45510cb8a8ceede87e14070533b41 312 SMART SM00346 68 157 1.6E-8 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RR42_RS09310 7cc45510cb8a8ceede87e14070533b41 312 Gene3D G3DSA:3.30.450.40 141 307 1.1E-27 T 23-04-2016 IPR029016 GAF domain-like RR42_RS09310 7cc45510cb8a8ceede87e14070533b41 312 SUPERFAMILY SSF55781 138 307 1.63E-27 T 23-04-2016 IPR029016 GAF domain-like RR42_RS09310 7cc45510cb8a8ceede87e14070533b41 312 PANTHER PTHR30136 44 307 2.2E-35 T 23-04-2016 RR42_RS09310 7cc45510cb8a8ceede87e14070533b41 312 Pfam PF09339 IclR helix-turn-helix domain 71 121 5.2E-12 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RR42_RS09310 7cc45510cb8a8ceede87e14070533b41 312 Gene3D G3DSA:1.10.10.10 62 137 9.0E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS09310 7cc45510cb8a8ceede87e14070533b41 312 Pfam PF01614 Bacterial transcriptional regulator 189 302 8.8E-15 T 23-04-2016 IPR014757 Transcription regulator IclR, C-terminal RR42_RS09310 7cc45510cb8a8ceede87e14070533b41 312 SUPERFAMILY SSF46785 70 137 7.96E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS00405 384d6137151de6cb4179f20501efb2ed 439 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 126 135 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RR42_RS00405 384d6137151de6cb4179f20501efb2ed 439 PIRSF PIRSF037238 41 433 2.0E-106 T 23-04-2016 IPR017150 Peptidase M20, glutamate carboxypeptidase RR42_RS00405 384d6137151de6cb4179f20501efb2ed 439 Pfam PF01546 Peptidase family M20/M25/M40 127 430 2.7E-28 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RR42_RS00405 384d6137151de6cb4179f20501efb2ed 439 SUPERFAMILY SSF55031 234 345 1.27E-22 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS00405 384d6137151de6cb4179f20501efb2ed 439 Gene3D G3DSA:3.40.630.10 45 236 2.1E-51 T 23-04-2016 RR42_RS00405 384d6137151de6cb4179f20501efb2ed 439 Gene3D G3DSA:3.40.630.10 343 433 2.1E-51 T 23-04-2016 RR42_RS00405 384d6137151de6cb4179f20501efb2ed 439 Pfam PF07687 Peptidase dimerisation domain 231 329 5.2E-19 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS00405 384d6137151de6cb4179f20501efb2ed 439 PANTHER PTHR11014:SF64 32 437 1.3E-133 T 23-04-2016 RR42_RS00405 384d6137151de6cb4179f20501efb2ed 439 PANTHER PTHR11014 32 437 1.3E-133 T 23-04-2016 RR42_RS00405 384d6137151de6cb4179f20501efb2ed 439 Gene3D G3DSA:3.30.70.360 237 340 3.1E-27 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS00405 384d6137151de6cb4179f20501efb2ed 439 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 158 197 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RR42_RS00405 384d6137151de6cb4179f20501efb2ed 439 SUPERFAMILY SSF53187 354 431 1.54E-48 T 23-04-2016 RR42_RS00405 384d6137151de6cb4179f20501efb2ed 439 SUPERFAMILY SSF53187 41 242 1.54E-48 T 23-04-2016 RR42_RS04735 aa1076e8c944f547cddfc01274e27814 241 Gene3D G3DSA:3.30.70.980 135 205 1.0E-28 T 23-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 RR42_RS04735 aa1076e8c944f547cddfc01274e27814 241 Gene3D G3DSA:1.10.10.200 1 79 1.7E-35 T 23-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like RR42_RS04735 aa1076e8c944f547cddfc01274e27814 241 SUPERFAMILY SSF75625 3 239 1.31E-95 T 23-04-2016 IPR029072 YebC-like RR42_RS04735 aa1076e8c944f547cddfc01274e27814 241 PANTHER PTHR12532 1 241 4.6E-110 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like RR42_RS04735 aa1076e8c944f547cddfc01274e27814 241 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 5.1E-93 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like RR42_RS04735 aa1076e8c944f547cddfc01274e27814 241 Gene3D G3DSA:3.30.1270.10 212 240 4.5E-37 T 23-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 RR42_RS04735 aa1076e8c944f547cddfc01274e27814 241 Gene3D G3DSA:3.30.1270.10 82 134 4.5E-37 T 23-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 RR42_RS04735 aa1076e8c944f547cddfc01274e27814 241 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 35.549 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like RR42_RS04735 aa1076e8c944f547cddfc01274e27814 241 Pfam PF01709 Transcriptional regulator 5 237 7.1E-94 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like RR42_RS09395 393a612a518192e9c4874817c5bcdad6 437 TIGRFAM TIGR00797 matE: MATE efflux family protein 16 410 2.9E-70 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RR42_RS09395 393a612a518192e9c4874817c5bcdad6 437 Pfam PF01554 MatE 260 390 3.6E-12 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RR42_RS09395 393a612a518192e9c4874817c5bcdad6 437 Pfam PF01554 MatE 16 172 4.4E-23 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RR42_RS09395 393a612a518192e9c4874817c5bcdad6 437 PANTHER PTHR11206 7 437 2.2E-101 T 23-04-2016 RR42_RS09395 393a612a518192e9c4874817c5bcdad6 437 PANTHER PTHR11206:SF94 7 437 2.2E-101 T 23-04-2016 RR42_RS04320 f5bfcc48bd8832448f25b205883c9f4a 774 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 21 199 1.3E-48 T 23-04-2016 IPR025199 DNA translocase FtsK, 4TM region RR42_RS04320 f5bfcc48bd8832448f25b205883c9f4a 774 Gene3D G3DSA:3.40.50.300 358 661 3.4E-95 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04320 f5bfcc48bd8832448f25b205883c9f4a 774 SUPERFAMILY SSF52540 358 665 2.26E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04320 f5bfcc48bd8832448f25b205883c9f4a 774 PANTHER PTHR22683 228 766 4.3E-260 T 23-04-2016 RR42_RS04320 f5bfcc48bd8832448f25b205883c9f4a 774 SMART SM00843 703 768 5.1E-37 T 23-04-2016 IPR018541 FtsK gamma domain RR42_RS04320 f5bfcc48bd8832448f25b205883c9f4a 774 SUPERFAMILY SSF46785 703 767 1.15E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS04320 f5bfcc48bd8832448f25b205883c9f4a 774 Pfam PF09397 Ftsk gamma domain 705 765 1.2E-25 T 23-04-2016 IPR018541 FtsK gamma domain RR42_RS04320 f5bfcc48bd8832448f25b205883c9f4a 774 Pfam PF01580 FtsK/SpoIIIE family 385 594 1.1E-63 T 23-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 RR42_RS04320 f5bfcc48bd8832448f25b205883c9f4a 774 PANTHER PTHR22683:SF41 228 766 4.3E-260 T 23-04-2016 RR42_RS19185 5a939667b9ec0b6f024aad51ab9b276c 131 PANTHER PTHR11758 1 131 5.3E-59 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RR42_RS19185 5a939667b9ec0b6f024aad51ab9b276c 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RR42_RS19185 5a939667b9ec0b6f024aad51ab9b276c 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 32.172 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RR42_RS19185 5a939667b9ec0b6f024aad51ab9b276c 131 Gene3D G3DSA:3.30.1370.30 2 72 1.4E-28 T 23-04-2016 RR42_RS19185 5a939667b9ec0b6f024aad51ab9b276c 131 Pfam PF00410 Ribosomal protein S8 5 130 3.6E-49 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RR42_RS19185 5a939667b9ec0b6f024aad51ab9b276c 131 SUPERFAMILY SSF56047 2 130 8.5E-48 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RR42_RS19185 5a939667b9ec0b6f024aad51ab9b276c 131 Gene3D G3DSA:3.30.1490.10 75 130 8.0E-28 T 23-04-2016 RR42_RS03315 e66c7b56e148e1d06bc58f21d361fa10 479 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 75 402 4.9E-72 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RR42_RS03315 e66c7b56e148e1d06bc58f21d361fa10 479 Pfam PF13533 Biotin-lipoyl like 100 147 1.2E-13 T 23-04-2016 RR42_RS03315 e66c7b56e148e1d06bc58f21d361fa10 479 PANTHER PTHR30469:SF12 74 416 1.7E-146 T 23-04-2016 IPR022824 Multidrug resistance protein MdtA RR42_RS03315 e66c7b56e148e1d06bc58f21d361fa10 479 SUPERFAMILY SSF111369 92 325 1.16E-55 T 23-04-2016 RR42_RS03315 e66c7b56e148e1d06bc58f21d361fa10 479 PANTHER PTHR30469 74 416 1.7E-146 T 23-04-2016 RR42_RS03315 e66c7b56e148e1d06bc58f21d361fa10 479 Gene3D G3DSA:2.40.50.100 208 241 6.1E-23 T 23-04-2016 RR42_RS03315 e66c7b56e148e1d06bc58f21d361fa10 479 Gene3D G3DSA:2.40.50.100 100 133 6.1E-23 T 23-04-2016 RR42_RS15690 e5e1d2841aacb5eb3515258ac38cccaa 461 Gene3D G3DSA:3.40.120.10 7 162 5.0E-33 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS15690 e5e1d2841aacb5eb3515258ac38cccaa 461 Gene3D G3DSA:3.30.310.50 369 458 1.4E-26 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS15690 e5e1d2841aacb5eb3515258ac38cccaa 461 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 141 3.4E-33 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS15690 e5e1d2841aacb5eb3515258ac38cccaa 461 SUPERFAMILY SSF53738 4 137 3.02E-36 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS15690 e5e1d2841aacb5eb3515258ac38cccaa 461 Gene3D G3DSA:3.40.120.10 172 249 1.1E-30 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS15690 e5e1d2841aacb5eb3515258ac38cccaa 461 Gene3D G3DSA:3.40.120.10 251 365 3.4E-43 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS15690 e5e1d2841aacb5eb3515258ac38cccaa 461 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 449 4.6E-10 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS15690 e5e1d2841aacb5eb3515258ac38cccaa 461 SUPERFAMILY SSF55957 367 460 1.96E-20 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS15690 e5e1d2841aacb5eb3515258ac38cccaa 461 PANTHER PTHR22573:SF28 1 460 6.3E-178 T 23-04-2016 RR42_RS15690 e5e1d2841aacb5eb3515258ac38cccaa 461 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 204 217 1.8E-24 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS15690 e5e1d2841aacb5eb3515258ac38cccaa 461 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 1.8E-24 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS15690 e5e1d2841aacb5eb3515258ac38cccaa 461 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 99 113 1.8E-24 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS15690 e5e1d2841aacb5eb3515258ac38cccaa 461 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 170 189 1.8E-24 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS15690 e5e1d2841aacb5eb3515258ac38cccaa 461 SUPERFAMILY SSF53738 258 354 3.73E-31 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS15690 e5e1d2841aacb5eb3515258ac38cccaa 461 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 156 253 1.6E-25 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS15690 e5e1d2841aacb5eb3515258ac38cccaa 461 SUPERFAMILY SSF53738 154 255 1.26E-30 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS15690 e5e1d2841aacb5eb3515258ac38cccaa 461 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 100 109 - T 23-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS15690 e5e1d2841aacb5eb3515258ac38cccaa 461 PANTHER PTHR22573 1 460 6.3E-178 T 23-04-2016 RR42_RS15690 e5e1d2841aacb5eb3515258ac38cccaa 461 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 365 2.6E-20 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RR42_RS07965 f0ec7cfab29e790d5029971c4cc7249a 232 SUPERFAMILY SSF48008 95 230 1.02E-29 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS07965 f0ec7cfab29e790d5029971c4cc7249a 232 Gene3D G3DSA:1.10.10.10 15 91 9.8E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS07965 f0ec7cfab29e790d5029971c4cc7249a 232 SMART SM00345 31 89 2.1E-18 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS07965 f0ec7cfab29e790d5029971c4cc7249a 232 SMART SM00895 99 223 2.1E-21 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS07965 f0ec7cfab29e790d5029971c4cc7249a 232 SUPERFAMILY SSF46785 24 93 2.84E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS07965 f0ec7cfab29e790d5029971c4cc7249a 232 PANTHER PTHR11751 26 115 5.3E-24 T 23-04-2016 RR42_RS07965 f0ec7cfab29e790d5029971c4cc7249a 232 Pfam PF07729 FCD domain 99 222 1.3E-28 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS07965 f0ec7cfab29e790d5029971c4cc7249a 232 Gene3D G3DSA:1.20.120.530 92 230 3.2E-32 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS07965 f0ec7cfab29e790d5029971c4cc7249a 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 28 89 8.4E-18 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS11215 515de7d1572f279ece4f6f5578d87c00 527 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 72 435 4.9E-70 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain RR42_RS11215 515de7d1572f279ece4f6f5578d87c00 527 Gene3D G3DSA:3.90.76.10 41 189 2.3E-27 T 23-04-2016 RR42_RS11215 515de7d1572f279ece4f6f5578d87c00 527 PANTHER PTHR30290 7 523 1.4E-148 T 23-04-2016 RR42_RS11215 515de7d1572f279ece4f6f5578d87c00 527 PANTHER PTHR30290:SF21 7 523 1.4E-148 T 23-04-2016 RR42_RS11215 515de7d1572f279ece4f6f5578d87c00 527 Gene3D G3DSA:3.10.105.10 299 495 3.0E-27 T 23-04-2016 RR42_RS11215 515de7d1572f279ece4f6f5578d87c00 527 Gene3D G3DSA:3.40.190.10 190 298 3.6E-27 T 23-04-2016 RR42_RS11215 515de7d1572f279ece4f6f5578d87c00 527 PIRSF PIRSF002741 6 526 2.1E-58 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RR42_RS11215 515de7d1572f279ece4f6f5578d87c00 527 SUPERFAMILY SSF53850 28 521 5.16E-97 T 23-04-2016 RR42_RS20790 a649bfb26b1f97eb7272437dfe605e92 225 Pfam PF04191 Phospholipid methyltransferase 112 204 2.5E-8 T 23-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 RR42_RS20790 a649bfb26b1f97eb7272437dfe605e92 225 PANTHER PTHR12714:SF2 14 225 2.9E-51 T 23-04-2016 RR42_RS20790 a649bfb26b1f97eb7272437dfe605e92 225 PANTHER PTHR12714 14 225 2.9E-51 T 23-04-2016 RR42_RS01450 9386541dc8efeec231d6103f519e550c 288 PIRSF PIRSF028200 1 276 2.6E-74 T 23-04-2016 IPR016875 Uncharacterised conserved protein UCP028200 RR42_RS05510 bce7426b270ffc79ee5352cb25b5be3f 119 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 2 119 20.4 T 23-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 RR42_RS05510 bce7426b270ffc79ee5352cb25b5be3f 119 PANTHER PTHR11058 3 119 9.5E-62 T 23-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 RR42_RS05510 bce7426b270ffc79ee5352cb25b5be3f 119 PANTHER PTHR11058:SF10 3 119 9.5E-62 T 23-04-2016 RR42_RS05510 bce7426b270ffc79ee5352cb25b5be3f 119 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 22 118 1.5E-37 T 23-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 RR42_RS14130 221f9e675dc1796d23a4b0f58e9123ac 199 Hamap MF_00528 Septum formation protein Maf [maf]. 8 196 29.19 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 RR42_RS14130 221f9e675dc1796d23a4b0f58e9123ac 199 PIRSF PIRSF006305 2 195 3.3E-43 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 RR42_RS14130 221f9e675dc1796d23a4b0f58e9123ac 199 SUPERFAMILY SSF52972 7 191 4.71E-56 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RR42_RS14130 221f9e675dc1796d23a4b0f58e9123ac 199 Pfam PF02545 Maf-like protein 9 191 9.4E-41 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 RR42_RS14130 221f9e675dc1796d23a4b0f58e9123ac 199 TIGRFAM TIGR00172 maf: septum formation protein Maf 7 190 7.1E-46 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 RR42_RS14130 221f9e675dc1796d23a4b0f58e9123ac 199 PANTHER PTHR11746:SF102 131 193 1.5E-19 T 23-04-2016 RR42_RS14130 221f9e675dc1796d23a4b0f58e9123ac 199 PANTHER PTHR11746 131 193 1.5E-19 T 23-04-2016 RR42_RS14130 221f9e675dc1796d23a4b0f58e9123ac 199 Gene3D G3DSA:3.90.950.10 7 194 1.9E-53 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RR42_RS02840 ee2ddef60b693fcea0bfc55f7844f1c8 290 Gene3D G3DSA:3.30.465.10 192 279 2.8E-27 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RR42_RS02840 ee2ddef60b693fcea0bfc55f7844f1c8 290 SUPERFAMILY SSF54631 56 196 3.54E-30 T 23-04-2016 RR42_RS02840 ee2ddef60b693fcea0bfc55f7844f1c8 290 Pfam PF03471 Transporter associated domain 203 278 1.5E-20 T 23-04-2016 IPR005170 Transporter-associated domain RR42_RS02840 ee2ddef60b693fcea0bfc55f7844f1c8 290 Pfam PF00571 CBS domain 137 185 5.0E-4 T 23-04-2016 IPR000644 CBS domain RR42_RS02840 ee2ddef60b693fcea0bfc55f7844f1c8 290 Pfam PF00571 CBS domain 91 123 9.4E-4 T 23-04-2016 IPR000644 CBS domain RR42_RS02840 ee2ddef60b693fcea0bfc55f7844f1c8 290 SUPERFAMILY SSF56176 200 285 9.54E-23 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RR42_RS02840 ee2ddef60b693fcea0bfc55f7844f1c8 290 SMART SM01091 202 280 1.1E-28 T 23-04-2016 IPR005170 Transporter-associated domain RR42_RS02840 ee2ddef60b693fcea0bfc55f7844f1c8 290 PANTHER PTHR22777 28 281 4.3E-101 T 23-04-2016 RR42_RS02840 ee2ddef60b693fcea0bfc55f7844f1c8 290 Gene3D G3DSA:3.10.580.10 55 191 7.4E-19 T 23-04-2016 RR42_RS20060 3bf93abfd798578549c8da0b37358bb8 379 Gene3D G3DSA:2.40.30.110 291 375 6.0E-22 T 23-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RR42_RS20060 3bf93abfd798578549c8da0b37358bb8 379 PANTHER PTHR13847 6 371 1.2E-55 T 23-04-2016 RR42_RS20060 3bf93abfd798578549c8da0b37358bb8 379 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 277 368 6.4E-13 T 23-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RR42_RS20060 3bf93abfd798578549c8da0b37358bb8 379 Gene3D G3DSA:3.30.70.1400 55 139 1.4E-29 T 23-04-2016 RR42_RS20060 3bf93abfd798578549c8da0b37358bb8 379 Gene3D G3DSA:3.30.1360.120 156 246 1.6E-49 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RR42_RS20060 3bf93abfd798578549c8da0b37358bb8 379 Gene3D G3DSA:3.30.1360.120 3 54 1.6E-49 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RR42_RS20060 3bf93abfd798578549c8da0b37358bb8 379 Hamap MF_00259 Aminomethyltransferase [gcvT]. 2 373 42.531 T 23-04-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RR42_RS20060 3bf93abfd798578549c8da0b37358bb8 379 SUPERFAMILY SSF101790 285 375 3.92E-19 T 23-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain RR42_RS20060 3bf93abfd798578549c8da0b37358bb8 379 PIRSF PIRSF006487 1 377 2.0E-76 T 23-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RR42_RS20060 3bf93abfd798578549c8da0b37358bb8 379 Pfam PF01571 Aminomethyltransferase folate-binding domain 8 269 1.2E-84 T 23-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal RR42_RS20060 3bf93abfd798578549c8da0b37358bb8 379 PANTHER PTHR13847:SF5 6 371 1.2E-55 T 23-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RR42_RS20060 3bf93abfd798578549c8da0b37358bb8 379 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 373 7.0E-112 T 23-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RR42_RS20060 3bf93abfd798578549c8da0b37358bb8 379 SUPERFAMILY SSF103025 3 285 4.49E-87 T 23-04-2016 RR42_RS11945 bb96db3181d1568ca352e808b4c54d72 115 PANTHER PTHR30041 1 115 1.3E-34 T 23-04-2016 RR42_RS11945 bb96db3181d1568ca352e808b4c54d72 115 PANTHER PTHR30041:SF3 1 115 1.3E-34 T 23-04-2016 RR42_RS11945 bb96db3181d1568ca352e808b4c54d72 115 Gene3D G3DSA:3.40.30.10 3 115 1.5E-39 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS11945 bb96db3181d1568ca352e808b4c54d72 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 5 112 1.4E-28 T 23-04-2016 IPR006504 Transcriptional regulator Spx/MgsR RR42_RS11945 bb96db3181d1568ca352e808b4c54d72 115 Pfam PF03960 ArsC family 6 112 6.1E-16 T 23-04-2016 IPR006660 Arsenate reductase-like RR42_RS11945 bb96db3181d1568ca352e808b4c54d72 115 SUPERFAMILY SSF52833 2 115 2.85E-32 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS13670 cbe915a617c84aaa0968f5f2ac0b51c3 573 Gene3D G3DSA:3.40.50.1220 192 375 2.8E-29 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RR42_RS13670 cbe915a617c84aaa0968f5f2ac0b51c3 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 405 534 3.2E-26 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RR42_RS13670 cbe915a617c84aaa0968f5f2ac0b51c3 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 178 3.4E-43 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RR42_RS13670 cbe915a617c84aaa0968f5f2ac0b51c3 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 326 9.3E-20 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RR42_RS13670 cbe915a617c84aaa0968f5f2ac0b51c3 573 Gene3D G3DSA:3.40.50.970 3 185 3.5E-48 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS13670 cbe915a617c84aaa0968f5f2ac0b51c3 573 PANTHER PTHR18968:SF13 1 534 3.4E-122 T 23-04-2016 RR42_RS13670 cbe915a617c84aaa0968f5f2ac0b51c3 573 SUPERFAMILY SSF52518 5 189 7.17E-41 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS13670 cbe915a617c84aaa0968f5f2ac0b51c3 573 SUPERFAMILY SSF52467 163 349 1.22E-30 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RR42_RS13670 cbe915a617c84aaa0968f5f2ac0b51c3 573 SUPERFAMILY SSF52518 364 536 1.02E-34 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS13670 cbe915a617c84aaa0968f5f2ac0b51c3 573 Gene3D G3DSA:3.40.50.970 376 536 1.4E-37 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS13670 cbe915a617c84aaa0968f5f2ac0b51c3 573 PANTHER PTHR18968 1 534 3.4E-122 T 23-04-2016 RR42_RS01175 865df79eb5488fc20752a24490236150 305 Pfam PF00892 EamA-like transporter family 163 289 4.8E-16 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS01175 865df79eb5488fc20752a24490236150 305 Pfam PF00892 EamA-like transporter family 38 149 1.0E-13 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS01175 865df79eb5488fc20752a24490236150 305 PANTHER PTHR22911:SF44 17 303 1.0E-55 T 23-04-2016 RR42_RS01175 865df79eb5488fc20752a24490236150 305 SUPERFAMILY SSF103481 55 150 1.57E-13 T 23-04-2016 RR42_RS01175 865df79eb5488fc20752a24490236150 305 PANTHER PTHR22911 17 303 1.0E-55 T 23-04-2016 RR42_RS01175 865df79eb5488fc20752a24490236150 305 SUPERFAMILY SSF103481 196 295 1.83E-13 T 23-04-2016 RR42_RS05860 4d03bc73096a9b4b6d106eed140f3cb3 359 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 352 9.8E-163 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RR42_RS05860 4d03bc73096a9b4b6d106eed140f3cb3 359 Pfam PF00793 DAHP synthetase I family 42 341 3.5E-101 T 23-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RR42_RS05860 4d03bc73096a9b4b6d106eed140f3cb3 359 PANTHER PTHR21225 1 358 4.7E-236 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RR42_RS05860 4d03bc73096a9b4b6d106eed140f3cb3 359 PANTHER PTHR21225:SF7 1 358 4.7E-236 T 23-04-2016 RR42_RS05860 4d03bc73096a9b4b6d106eed140f3cb3 359 Gene3D G3DSA:3.20.20.70 9 352 6.4E-155 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS05860 4d03bc73096a9b4b6d106eed140f3cb3 359 SUPERFAMILY SSF51569 7 351 9.16E-135 T 23-04-2016 RR42_RS05860 4d03bc73096a9b4b6d106eed140f3cb3 359 PIRSF PIRSF001361 1 355 8.7E-159 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RR42_RS15395 6d86197132e2e7f4588e2800dae79fc9 271 PANTHER PTHR30136:SF4 22 267 6.1E-58 T 23-04-2016 RR42_RS15395 6d86197132e2e7f4588e2800dae79fc9 271 Gene3D G3DSA:3.30.450.40 97 267 2.5E-33 T 23-04-2016 IPR029016 GAF domain-like RR42_RS15395 6d86197132e2e7f4588e2800dae79fc9 271 SUPERFAMILY SSF55781 93 267 4.38E-33 T 23-04-2016 IPR029016 GAF domain-like RR42_RS15395 6d86197132e2e7f4588e2800dae79fc9 271 PANTHER PTHR30136 22 267 6.1E-58 T 23-04-2016 RR42_RS15395 6d86197132e2e7f4588e2800dae79fc9 271 SUPERFAMILY SSF46785 26 99 1.3E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS15395 6d86197132e2e7f4588e2800dae79fc9 271 Pfam PF01614 Bacterial transcriptional regulator 147 267 6.5E-11 T 23-04-2016 IPR014757 Transcription regulator IclR, C-terminal RR42_RS15395 6d86197132e2e7f4588e2800dae79fc9 271 Pfam PF09339 IclR helix-turn-helix domain 28 79 4.2E-14 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RR42_RS15395 6d86197132e2e7f4588e2800dae79fc9 271 SMART SM00346 26 116 6.2E-20 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RR42_RS15395 6d86197132e2e7f4588e2800dae79fc9 271 Gene3D G3DSA:1.10.10.10 19 96 3.7E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS17370 a19e0cfc63e9451708251b911e1566f9 161 Pfam PF00210 Ferritin-like domain 23 160 8.4E-29 T 23-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 RR42_RS17370 a19e0cfc63e9451708251b911e1566f9 161 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 43 59 3.1E-11 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RR42_RS17370 a19e0cfc63e9451708251b911e1566f9 161 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 67 83 3.1E-11 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RR42_RS17370 a19e0cfc63e9451708251b911e1566f9 161 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 138 156 3.1E-11 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RR42_RS17370 a19e0cfc63e9451708251b911e1566f9 161 PANTHER PTHR30295:SF6 1 160 3.3E-70 T 23-04-2016 RR42_RS17370 a19e0cfc63e9451708251b911e1566f9 161 Gene3D G3DSA:1.20.1260.10 4 160 1.2E-68 T 23-04-2016 IPR012347 Ferritin-related RR42_RS17370 a19e0cfc63e9451708251b911e1566f9 161 PIRSF PIRSF005900 1 161 2.8E-49 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RR42_RS17370 a19e0cfc63e9451708251b911e1566f9 161 ProSitePatterns PS00818 Dps protein family signature 1. 43 59 - T 23-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 RR42_RS17370 a19e0cfc63e9451708251b911e1566f9 161 ProSitePatterns PS00819 Dps protein family signature 2. 69 83 - T 23-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 RR42_RS17370 a19e0cfc63e9451708251b911e1566f9 161 PANTHER PTHR30295 1 160 3.3E-70 T 23-04-2016 RR42_RS17370 a19e0cfc63e9451708251b911e1566f9 161 SUPERFAMILY SSF47240 9 160 4.47E-49 T 23-04-2016 IPR009078 Ferritin-like superfamily RR42_RS14600 3ee441d80d627e894d780b6984c70390 214 PANTHER PTHR11260 2 212 1.3E-55 T 23-04-2016 RR42_RS14600 3ee441d80d627e894d780b6984c70390 214 Pfam PF00043 Glutathione S-transferase, C-terminal domain 127 203 7.2E-8 T 23-04-2016 IPR004046 Glutathione S-transferase, C-terminal RR42_RS14600 3ee441d80d627e894d780b6984c70390 214 SUPERFAMILY SSF47616 87 209 4.18E-31 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS14600 3ee441d80d627e894d780b6984c70390 214 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 86 9.6E-9 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RR42_RS14600 3ee441d80d627e894d780b6984c70390 214 Gene3D G3DSA:3.40.30.10 3 83 3.5E-18 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS14600 3ee441d80d627e894d780b6984c70390 214 Gene3D G3DSA:1.20.1050.10 88 208 1.3E-31 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS14600 3ee441d80d627e894d780b6984c70390 214 SUPERFAMILY SSF52833 2 92 9.81E-18 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS14600 3ee441d80d627e894d780b6984c70390 214 PANTHER PTHR11260:SF157 2 212 1.3E-55 T 23-04-2016 RR42_RS13705 b183617b3827e9d38b7da2c8de3c0723 295 SUPERFAMILY SSF53474 23 289 3.21E-38 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS13705 b183617b3827e9d38b7da2c8de3c0723 295 PANTHER PTHR10992 21 294 8.2E-30 T 23-04-2016 RR42_RS13705 b183617b3827e9d38b7da2c8de3c0723 295 Gene3D G3DSA:3.40.50.1820 13 290 4.8E-38 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS13705 b183617b3827e9d38b7da2c8de3c0723 295 Pfam PF12697 Alpha/beta hydrolase family 50 285 2.5E-15 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS05670 8553e8a528f6001c8a35397cbe44a75a 101 PANTHER PTHR33569 1 101 7.5E-64 T 23-04-2016 RR42_RS05670 8553e8a528f6001c8a35397cbe44a75a 101 PANTHER PTHR33569:SF1 1 101 7.5E-64 T 23-04-2016 RR42_RS05670 8553e8a528f6001c8a35397cbe44a75a 101 Pfam PF00699 Urease beta subunit 3 99 7.1E-46 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RR42_RS05670 8553e8a528f6001c8a35397cbe44a75a 101 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 32.094 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RR42_RS05670 8553e8a528f6001c8a35397cbe44a75a 101 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 99 4.9E-46 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RR42_RS05670 8553e8a528f6001c8a35397cbe44a75a 101 Gene3D G3DSA:2.10.150.10 1 100 4.2E-51 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RR42_RS05670 8553e8a528f6001c8a35397cbe44a75a 101 SUPERFAMILY SSF51278 1 101 1.22E-47 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RR42_RS20200 0ccdae07d4eb6487baeff2127844cca4 300 Gene3D G3DSA:3.90.1530.10 34 131 4.7E-39 T 23-04-2016 RR42_RS20200 0ccdae07d4eb6487baeff2127844cca4 300 SMART SM00470 34 125 9.7E-35 T 23-04-2016 IPR003115 ParB/Sulfiredoxin RR42_RS20200 0ccdae07d4eb6487baeff2127844cca4 300 SUPERFAMILY SSF110849 36 127 1.05E-28 T 23-04-2016 IPR003115 ParB/Sulfiredoxin RR42_RS20200 0ccdae07d4eb6487baeff2127844cca4 300 PANTHER PTHR33375 1 295 2.2E-92 T 23-04-2016 RR42_RS20200 0ccdae07d4eb6487baeff2127844cca4 300 SUPERFAMILY SSF109709 118 224 2.51E-34 T 23-04-2016 RR42_RS20200 0ccdae07d4eb6487baeff2127844cca4 300 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 31 209 3.1E-59 T 23-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 RR42_RS20200 0ccdae07d4eb6487baeff2127844cca4 300 PANTHER PTHR33375:SF1 1 295 2.2E-92 T 23-04-2016 RR42_RS20200 0ccdae07d4eb6487baeff2127844cca4 300 Pfam PF02195 ParB-like nuclease domain 37 125 6.3E-27 T 23-04-2016 IPR003115 ParB/Sulfiredoxin RR42_RS11840 f2e9210da879a5cfc6a22c36272904d5 463 Gene3D G3DSA:2.30.42.10 100 202 7.8E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS11840 f2e9210da879a5cfc6a22c36272904d5 463 Pfam PF13180 PDZ domain 229 295 2.5E-9 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS11840 f2e9210da879a5cfc6a22c36272904d5 463 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 1 459 8.2E-95 T 23-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 RR42_RS11840 f2e9210da879a5cfc6a22c36272904d5 463 PANTHER PTHR22939:SF78 214 460 8.0E-69 T 23-04-2016 RR42_RS11840 f2e9210da879a5cfc6a22c36272904d5 463 PANTHER PTHR22939 214 460 8.0E-69 T 23-04-2016 RR42_RS11840 f2e9210da879a5cfc6a22c36272904d5 463 Gene3D G3DSA:2.30.42.10 214 301 3.3E-18 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS11840 f2e9210da879a5cfc6a22c36272904d5 463 SUPERFAMILY SSF50156 216 302 1.45E-14 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS11840 f2e9210da879a5cfc6a22c36272904d5 463 SMART SM00228 219 286 3.3E-10 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS11840 f2e9210da879a5cfc6a22c36272904d5 463 SMART SM00228 117 195 1.7 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS11840 f2e9210da879a5cfc6a22c36272904d5 463 SUPERFAMILY SSF50156 93 180 1.87E-8 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS11840 f2e9210da879a5cfc6a22c36272904d5 463 Pfam PF02163 Peptidase family M50 6 446 1.5E-73 T 23-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 RR42_RS06800 b54f204e74d28889022605ab287f66a6 291 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 37 59 - T 23-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RR42_RS06800 b54f204e74d28889022605ab287f66a6 291 Gene3D G3DSA:3.30.200.20 31 96 6.4E-14 T 23-04-2016 RR42_RS06800 b54f204e74d28889022605ab287f66a6 291 Pfam PF00069 Protein kinase domain 32 242 9.4E-33 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RR42_RS06800 b54f204e74d28889022605ab287f66a6 291 SUPERFAMILY SSF56112 18 282 4.39E-43 T 23-04-2016 IPR011009 Protein kinase-like domain RR42_RS06800 b54f204e74d28889022605ab287f66a6 291 Gene3D G3DSA:1.10.510.10 97 279 8.3E-25 T 23-04-2016 RR42_RS06800 b54f204e74d28889022605ab287f66a6 291 PANTHER PTHR24362 31 291 3.1E-35 T 23-04-2016 RR42_RS12710 5aa8f0bf9496e0ee74a667b9967e2cd3 1019 Gene3D G3DSA:3.40.50.300 778 1010 2.2E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12710 5aa8f0bf9496e0ee74a667b9967e2cd3 1019 PANTHER PTHR24221 443 1019 1.5E-195 T 23-04-2016 RR42_RS12710 5aa8f0bf9496e0ee74a667b9967e2cd3 1019 SMART SM00382 805 991 2.2E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS12710 5aa8f0bf9496e0ee74a667b9967e2cd3 1019 Gene3D G3DSA:2.60.120.10 15 132 3.0E-26 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS12710 5aa8f0bf9496e0ee74a667b9967e2cd3 1019 Gene3D G3DSA:2.60.120.10 148 272 8.2E-23 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS12710 5aa8f0bf9496e0ee74a667b9967e2cd3 1019 Pfam PF00005 ABC transporter 796 945 1.5E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS12710 5aa8f0bf9496e0ee74a667b9967e2cd3 1019 ProSitePatterns PS00211 ABC transporters family signature. 917 931 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS12710 5aa8f0bf9496e0ee74a667b9967e2cd3 1019 SMART SM00100 150 268 8.4E-11 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain RR42_RS12710 5aa8f0bf9496e0ee74a667b9967e2cd3 1019 SMART SM00100 19 136 3.7E-14 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain RR42_RS12710 5aa8f0bf9496e0ee74a667b9967e2cd3 1019 SUPERFAMILY SSF90123 448 762 5.1E-64 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RR42_RS12710 5aa8f0bf9496e0ee74a667b9967e2cd3 1019 Gene3D G3DSA:3.90.70.10 312 431 8.1E-23 T 23-04-2016 RR42_RS12710 5aa8f0bf9496e0ee74a667b9967e2cd3 1019 SUPERFAMILY SSF51206 150 264 5.11E-20 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like RR42_RS12710 5aa8f0bf9496e0ee74a667b9967e2cd3 1019 Pfam PF00664 ABC transporter transmembrane region 463 729 3.5E-43 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RR42_RS12710 5aa8f0bf9496e0ee74a667b9967e2cd3 1019 Gene3D G3DSA:1.20.1560.10 448 762 6.3E-74 T 23-04-2016 RR42_RS12710 5aa8f0bf9496e0ee74a667b9967e2cd3 1019 Pfam PF03412 Peptidase C39 family 306 434 5.3E-39 T 23-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 RR42_RS12710 5aa8f0bf9496e0ee74a667b9967e2cd3 1019 Pfam PF00027 Cyclic nucleotide-binding domain 40 123 3.5E-15 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain RR42_RS12710 5aa8f0bf9496e0ee74a667b9967e2cd3 1019 Pfam PF00027 Cyclic nucleotide-binding domain 169 255 3.0E-16 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain RR42_RS12710 5aa8f0bf9496e0ee74a667b9967e2cd3 1019 SUPERFAMILY SSF52540 769 1015 4.66E-86 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12710 5aa8f0bf9496e0ee74a667b9967e2cd3 1019 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 46 62 - T 23-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site RR42_RS12710 5aa8f0bf9496e0ee74a667b9967e2cd3 1019 SUPERFAMILY SSF51206 12 135 4.71E-23 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like RR42_RS18810 ebcc0a15d8b85eef325a05835a4e20b0 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 77 8.6E-18 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RR42_RS18810 ebcc0a15d8b85eef325a05835a4e20b0 203 SUPERFAMILY SSF47616 73 202 4.41E-24 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS18810 ebcc0a15d8b85eef325a05835a4e20b0 203 PANTHER PTHR11260:SF44 1 203 4.8E-63 T 23-04-2016 RR42_RS18810 ebcc0a15d8b85eef325a05835a4e20b0 203 PANTHER PTHR11260 1 203 4.8E-63 T 23-04-2016 RR42_RS18810 ebcc0a15d8b85eef325a05835a4e20b0 203 Gene3D G3DSA:1.20.1050.10 91 194 3.4E-19 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS18810 ebcc0a15d8b85eef325a05835a4e20b0 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 116 188 5.7E-7 T 23-04-2016 IPR004046 Glutathione S-transferase, C-terminal RR42_RS18810 ebcc0a15d8b85eef325a05835a4e20b0 203 SUPERFAMILY SSF52833 1 101 1.88E-27 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS18810 ebcc0a15d8b85eef325a05835a4e20b0 203 Gene3D G3DSA:3.40.30.10 1 90 9.1E-34 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS06680 9d5836148ba07e4b260fb7d51fd0c643 202 Pfam PF07603 Protein of unknown function (DUF1566) 47 197 2.0E-12 T 23-04-2016 IPR011460 Protein of unknown function DUF1566 RR42_RS06035 89189905760ab607885d0ebe569d1adf 106 Gene3D G3DSA:2.60.300.12 1 95 2.0E-34 T 23-04-2016 IPR000361 FeS cluster biogenesis RR42_RS06035 89189905760ab607885d0ebe569d1adf 106 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 102 3.8E-23 T 23-04-2016 IPR000361 FeS cluster biogenesis RR42_RS06035 89189905760ab607885d0ebe569d1adf 106 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 2 106 1.3E-36 T 23-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 RR42_RS06035 89189905760ab607885d0ebe569d1adf 106 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 87 104 - T 23-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site RR42_RS06035 89189905760ab607885d0ebe569d1adf 106 PANTHER PTHR10072 1 106 1.7E-51 T 23-04-2016 RR42_RS06035 89189905760ab607885d0ebe569d1adf 106 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 2 106 4.5E-53 T 23-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 RR42_RS06035 89189905760ab607885d0ebe569d1adf 106 SUPERFAMILY SSF89360 1 95 3.79E-32 T 23-04-2016 IPR000361 FeS cluster biogenesis RR42_RS06035 89189905760ab607885d0ebe569d1adf 106 PANTHER PTHR10072:SF48 1 106 1.7E-51 T 23-04-2016 IPR031108 FeS assembly protein IscA-like GO:0005198|GO:0016226|GO:0051536 RR42_RS14660 8ca9ae45bad0793a3915729e1e1be39f 211 Pfam PF02417 Chromate transporter 12 168 1.6E-30 T 23-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 RR42_RS14660 8ca9ae45bad0793a3915729e1e1be39f 211 PANTHER PTHR33567 1 183 3.1E-27 T 23-04-2016 RR42_RS19525 591331b76f484ec0c85c0c223fa64b0d 515 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 16 94 2.4E-4 T 23-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 RR42_RS19525 591331b76f484ec0c85c0c223fa64b0d 515 Pfam PF00437 Type II/IV secretion system protein 142 405 5.6E-83 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RR42_RS19525 591331b76f484ec0c85c0c223fa64b0d 515 PANTHER PTHR30258:SF9 31 515 4.4E-227 T 23-04-2016 RR42_RS19525 591331b76f484ec0c85c0c223fa64b0d 515 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 28 513 1.1E-222 T 23-04-2016 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 RR42_RS19525 591331b76f484ec0c85c0c223fa64b0d 515 PANTHER PTHR30258 31 515 4.4E-227 T 23-04-2016 RR42_RS19525 591331b76f484ec0c85c0c223fa64b0d 515 Gene3D G3DSA:3.30.450.90 109 238 1.1E-52 T 23-04-2016 RR42_RS19525 591331b76f484ec0c85c0c223fa64b0d 515 SMART SM00382 266 392 7.6E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS19525 591331b76f484ec0c85c0c223fa64b0d 515 SUPERFAMILY SSF52540 115 513 1.27E-100 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS19525 591331b76f484ec0c85c0c223fa64b0d 515 Gene3D G3DSA:3.40.50.300 244 513 1.6E-100 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS19525 591331b76f484ec0c85c0c223fa64b0d 515 SUPERFAMILY SSF160246 28 90 1.44E-7 T 23-04-2016 RR42_RS19525 591331b76f484ec0c85c0c223fa64b0d 515 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 333 347 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RR42_RS16780 bc4124105853c6ba6c24bff91096778d 129 SUPERFAMILY SSF103247 3 119 1.06E-29 T 23-04-2016 IPR005180 Domain of unknown function DUF302 RR42_RS16780 bc4124105853c6ba6c24bff91096778d 129 Gene3D G3DSA:3.30.310.70 3 118 7.3E-29 T 23-04-2016 IPR005180 Domain of unknown function DUF302 RR42_RS16780 bc4124105853c6ba6c24bff91096778d 129 Pfam PF03625 Domain of unknown function DUF302 32 91 2.1E-17 T 23-04-2016 IPR005180 Domain of unknown function DUF302 RR42_RS16910 869a4a832394a39558b0fde616e5b423 203 PANTHER PTHR37943:SF1 1 174 1.1E-45 T 23-04-2016 RR42_RS16910 869a4a832394a39558b0fde616e5b423 203 Pfam PF05962 HutD 12 182 2.8E-55 T 23-04-2016 IPR010282 Uncharacterised protein family HutD/Ves RR42_RS16910 869a4a832394a39558b0fde616e5b423 203 SUPERFAMILY SSF51182 4 173 1.08E-53 T 23-04-2016 IPR011051 RmlC-like cupin domain RR42_RS16910 869a4a832394a39558b0fde616e5b423 203 Gene3D G3DSA:2.60.120.10 110 151 5.9E-6 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS16910 869a4a832394a39558b0fde616e5b423 203 PANTHER PTHR37943 1 174 1.1E-45 T 23-04-2016 RR42_RS16910 869a4a832394a39558b0fde616e5b423 203 Gene3D G3DSA:2.60.120.10 13 109 4.0E-39 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS13625 cc565a0d50e1d7e1e6484837044094b7 288 Gene3D G3DSA:3.30.465.10 58 172 9.9E-39 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RR42_RS13625 cc565a0d50e1d7e1e6484837044094b7 288 PANTHER PTHR11908:SF68 3 279 1.7E-64 T 23-04-2016 RR42_RS13625 cc565a0d50e1d7e1e6484837044094b7 288 Gene3D G3DSA:3.30.43.10 1 52 2.1E-14 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RR42_RS13625 cc565a0d50e1d7e1e6484837044094b7 288 SMART SM01092 180 282 1.1E-15 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RR42_RS13625 cc565a0d50e1d7e1e6484837044094b7 288 Gene3D G3DSA:3.30.390.50 181 281 1.2E-22 T 23-04-2016 RR42_RS13625 cc565a0d50e1d7e1e6484837044094b7 288 SUPERFAMILY SSF56176 1 173 1.91E-53 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RR42_RS13625 cc565a0d50e1d7e1e6484837044094b7 288 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 173 2.5E-49 T 23-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 RR42_RS13625 cc565a0d50e1d7e1e6484837044094b7 288 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 187 280 5.1E-16 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RR42_RS13625 cc565a0d50e1d7e1e6484837044094b7 288 PANTHER PTHR11908 3 279 1.7E-64 T 23-04-2016 RR42_RS13625 cc565a0d50e1d7e1e6484837044094b7 288 SUPERFAMILY SSF55447 182 283 3.4E-21 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RR42_RS04820 2545a2f9c6e3fd42e2798ab7870c0409 215 SUPERFAMILY SSF161098 11 202 1.83E-37 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS04820 2545a2f9c6e3fd42e2798ab7870c0409 215 Gene3D G3DSA:1.10.3720.10 8 203 4.1E-33 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS04820 2545a2f9c6e3fd42e2798ab7870c0409 215 PANTHER PTHR30177:SF4 1 215 2.1E-76 T 23-04-2016 RR42_RS04820 2545a2f9c6e3fd42e2798ab7870c0409 215 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 212 4.1E-22 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS04820 2545a2f9c6e3fd42e2798ab7870c0409 215 PANTHER PTHR30177 1 215 2.1E-76 T 23-04-2016 RR42_RS10275 b1ab3f10bfe6f84ec4b484f9992afc92 210 Gene3D G3DSA:3.40.50.2300 1 119 5.7E-37 T 23-04-2016 RR42_RS10275 b1ab3f10bfe6f84ec4b484f9992afc92 210 Pfam PF00072 Response regulator receiver domain 5 115 3.6E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS10275 b1ab3f10bfe6f84ec4b484f9992afc92 210 SUPERFAMILY SSF46894 140 209 3.06E-20 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS10275 b1ab3f10bfe6f84ec4b484f9992afc92 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 7.6E-17 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS10275 b1ab3f10bfe6f84ec4b484f9992afc92 210 SUPERFAMILY SSF52172 1 134 8.11E-36 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS10275 b1ab3f10bfe6f84ec4b484f9992afc92 210 SMART SM00448 2 115 7.6E-35 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS10275 b1ab3f10bfe6f84ec4b484f9992afc92 210 PANTHER PTHR26402:SF458 2 209 1.8E-64 T 23-04-2016 RR42_RS10275 b1ab3f10bfe6f84ec4b484f9992afc92 210 SMART SM00421 146 203 1.1E-17 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS10275 b1ab3f10bfe6f84ec4b484f9992afc92 210 PANTHER PTHR26402 2 209 1.8E-64 T 23-04-2016 RR42_RS10275 b1ab3f10bfe6f84ec4b484f9992afc92 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.3E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS10275 b1ab3f10bfe6f84ec4b484f9992afc92 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.3E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS10275 b1ab3f10bfe6f84ec4b484f9992afc92 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.3E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS10275 b1ab3f10bfe6f84ec4b484f9992afc92 210 Gene3D G3DSA:1.10.10.10 120 209 1.1E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS16840 8061b6682209600346368e543f453445 309 Pfam PF07859 alpha/beta hydrolase fold 91 244 1.6E-15 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RR42_RS16840 8061b6682209600346368e543f453445 309 Gene3D G3DSA:3.40.50.1820 39 291 5.6E-41 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS16840 8061b6682209600346368e543f453445 309 PANTHER PTHR23024:SF163 89 307 2.0E-27 T 23-04-2016 RR42_RS16840 8061b6682209600346368e543f453445 309 SUPERFAMILY SSF53474 21 290 5.92E-38 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS16840 8061b6682209600346368e543f453445 309 PANTHER PTHR23024 89 307 2.0E-27 T 23-04-2016 RR42_RS06400 e94964274e204d222533e9983b6ede92 546 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 178 203 - T 23-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 RR42_RS06400 e94964274e204d222533e9983b6ede92 546 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 64 467 2.2E-61 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RR42_RS06400 e94964274e204d222533e9983b6ede92 546 Pfam PF00474 Sodium:solute symporter family 64 469 9.4E-113 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RR42_RS06400 e94964274e204d222533e9983b6ede92 546 PANTHER PTHR11819:SF13 32 528 1.4E-244 T 23-04-2016 RR42_RS06400 e94964274e204d222533e9983b6ede92 546 PANTHER PTHR11819 32 528 1.4E-244 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RR42_RS13170 45144e2d43c325dfdf6d018fb9d3060b 442 SUPERFAMILY SSF50249 2 63 2.11E-6 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS13170 45144e2d43c325dfdf6d018fb9d3060b 442 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 93 436 1.1E-17 T 23-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 RR42_RS13170 45144e2d43c325dfdf6d018fb9d3060b 442 PANTHER PTHR11061 2 441 1.6E-96 T 23-04-2016 RR42_RS13170 45144e2d43c325dfdf6d018fb9d3060b 442 Gene3D G3DSA:2.40.50.140 2 76 2.0E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS13170 45144e2d43c325dfdf6d018fb9d3060b 442 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 424 434 - T 23-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site RR42_RS13170 45144e2d43c325dfdf6d018fb9d3060b 442 PANTHER PTHR11061:SF30 2 441 1.6E-96 T 23-04-2016 RR42_RS13170 45144e2d43c325dfdf6d018fb9d3060b 442 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 1 442 67.164 T 23-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 RR42_RS13170 45144e2d43c325dfdf6d018fb9d3060b 442 SUPERFAMILY SSF53335 64 439 2.04E-78 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS13170 45144e2d43c325dfdf6d018fb9d3060b 442 Gene3D G3DSA:3.40.50.150 241 441 1.1E-51 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS18620 15d88094cf8261c61d0509efcd859c96 125 Gene3D G3DSA:3.30.429.10 1 120 4.9E-16 T 23-04-2016 RR42_RS18620 15d88094cf8261c61d0509efcd859c96 125 SUPERFAMILY SSF55331 2 102 1.26E-11 T 23-04-2016 IPR014347 Tautomerase/MIF superfamily RR42_RS14140 22f18167e54d992179ce8cbb3ec7b9ca 389 SUPERFAMILY SSF52096 276 337 1.97E-39 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS14140 22f18167e54d992179ce8cbb3ec7b9ca 389 SUPERFAMILY SSF52096 128 247 1.97E-39 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS14140 22f18167e54d992179ce8cbb3ec7b9ca 389 Gene3D G3DSA:3.90.226.10 114 239 4.8E-44 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS14140 22f18167e54d992179ce8cbb3ec7b9ca 389 Gene3D G3DSA:3.90.226.10 277 363 4.8E-44 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS14140 22f18167e54d992179ce8cbb3ec7b9ca 389 PANTHER PTHR30341:SF1 84 379 5.1E-90 T 23-04-2016 RR42_RS14140 22f18167e54d992179ce8cbb3ec7b9ca 389 Pfam PF01343 Peptidase family S49 203 346 5.6E-33 T 23-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 RR42_RS14140 22f18167e54d992179ce8cbb3ec7b9ca 389 PANTHER PTHR30341 84 379 5.1E-90 T 23-04-2016 RR42_RS02050 bcfc28fa000636a423cd08b00e172b24 389 Gene3D G3DSA:1.10.340.30 39 140 2.2E-43 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RR42_RS02050 bcfc28fa000636a423cd08b00e172b24 389 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 24 293 8.9E-94 T 23-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 RR42_RS02050 bcfc28fa000636a423cd08b00e172b24 389 Gene3D G3DSA:3.90.79.10 257 383 1.1E-23 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RR42_RS02050 bcfc28fa000636a423cd08b00e172b24 389 SMART SM00478 57 214 6.8E-40 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RR42_RS02050 bcfc28fa000636a423cd08b00e172b24 389 Gene3D G3DSA:1.10.1670.10 141 251 1.7E-31 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RR42_RS02050 bcfc28fa000636a423cd08b00e172b24 389 PANTHER PTHR10359:SF1 23 345 2.6E-79 T 23-04-2016 RR42_RS02050 bcfc28fa000636a423cd08b00e172b24 389 Pfam PF00633 Helix-hairpin-helix motif 117 146 1.2E-5 T 23-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 RR42_RS02050 bcfc28fa000636a423cd08b00e172b24 389 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 54 185 4.2E-18 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RR42_RS02050 bcfc28fa000636a423cd08b00e172b24 389 PANTHER PTHR10359 23 345 2.6E-79 T 23-04-2016 RR42_RS02050 bcfc28fa000636a423cd08b00e172b24 389 SUPERFAMILY SSF48150 23 253 7.69E-67 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RR42_RS02050 bcfc28fa000636a423cd08b00e172b24 389 SUPERFAMILY SSF55811 248 382 2.41E-26 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RR42_RS02050 bcfc28fa000636a423cd08b00e172b24 389 Pfam PF14815 NUDIX domain 262 382 3.0E-22 T 23-04-2016 IPR029119 MutY, C-terminal RR42_RS03460 625e914e488aabd1c0249c879770335d 369 PANTHER PTHR30160 24 353 2.3E-71 T 23-04-2016 RR42_RS03460 625e914e488aabd1c0249c879770335d 369 Gene3D G3DSA:3.40.50.300 55 103 8.4E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03460 625e914e488aabd1c0249c879770335d 369 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 7 340 37.874 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 RR42_RS03460 625e914e488aabd1c0249c879770335d 369 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 29 312 1.3E-65 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 RR42_RS03460 625e914e488aabd1c0249c879770335d 369 PANTHER PTHR30160:SF13 24 353 2.3E-71 T 23-04-2016 RR42_RS03460 625e914e488aabd1c0249c879770335d 369 SUPERFAMILY SSF52540 56 167 7.68E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03460 625e914e488aabd1c0249c879770335d 369 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 23 338 3.5E-101 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 RR42_RS12440 1265e38387f50066b16761fe6f4c6854 291 SUPERFAMILY SSF46626 184 279 2.68E-16 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS12440 1265e38387f50066b16761fe6f4c6854 291 SUPERFAMILY SSF46626 3 17 2.68E-16 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS12440 1265e38387f50066b16761fe6f4c6854 291 Gene3D G3DSA:1.10.760.10 189 279 4.2E-12 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS12440 1265e38387f50066b16761fe6f4c6854 291 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 189 272 1.5E-7 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS01705 4e8c9a9d690dd7881bdcf5abb0b335eb 438 Gene3D G3DSA:1.10.10.60 386 438 9.4E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS01705 4e8c9a9d690dd7881bdcf5abb0b335eb 438 Pfam PF00072 Response regulator receiver domain 7 116 7.3E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS01705 4e8c9a9d690dd7881bdcf5abb0b335eb 438 SUPERFAMILY SSF52540 145 374 3.51E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01705 4e8c9a9d690dd7881bdcf5abb0b335eb 438 PANTHER PTHR32071:SF11 5 438 4.1E-212 T 23-04-2016 RR42_RS01705 4e8c9a9d690dd7881bdcf5abb0b335eb 438 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 438 1.3E-6 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS01705 4e8c9a9d690dd7881bdcf5abb0b335eb 438 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 1.3E-6 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS01705 4e8c9a9d690dd7881bdcf5abb0b335eb 438 Gene3D G3DSA:3.40.50.2300 2 130 1.2E-33 T 23-04-2016 RR42_RS01705 4e8c9a9d690dd7881bdcf5abb0b335eb 438 Gene3D G3DSA:3.40.50.300 144 317 3.7E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01705 4e8c9a9d690dd7881bdcf5abb0b335eb 438 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RR42_RS01705 4e8c9a9d690dd7881bdcf5abb0b335eb 438 Pfam PF00158 Sigma-54 interaction domain 145 311 1.9E-68 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RR42_RS01705 4e8c9a9d690dd7881bdcf5abb0b335eb 438 SUPERFAMILY SSF52172 3 189 1.02E-41 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS01705 4e8c9a9d690dd7881bdcf5abb0b335eb 438 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RR42_RS01705 4e8c9a9d690dd7881bdcf5abb0b335eb 438 PANTHER PTHR32071 5 438 4.1E-212 T 23-04-2016 RR42_RS01705 4e8c9a9d690dd7881bdcf5abb0b335eb 438 Pfam PF02954 Bacterial regulatory protein, Fis family 399 436 5.6E-9 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS01705 4e8c9a9d690dd7881bdcf5abb0b335eb 438 SMART SM00448 5 116 5.9E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS01705 4e8c9a9d690dd7881bdcf5abb0b335eb 438 SUPERFAMILY SSF46689 381 438 3.94E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS01705 4e8c9a9d690dd7881bdcf5abb0b335eb 438 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RR42_RS01705 4e8c9a9d690dd7881bdcf5abb0b335eb 438 SMART SM00382 165 308 4.5E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS01705 4e8c9a9d690dd7881bdcf5abb0b335eb 438 Gene3D G3DSA:1.10.8.60 318 385 4.9E-19 T 23-04-2016 RR42_RS03390 a86608ff34029e21a85ad7a6f8562f44 322 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 44 317 3.9E-82 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS03390 a86608ff34029e21a85ad7a6f8562f44 322 SUPERFAMILY SSF53850 109 283 6.41E-11 T 23-04-2016 RR42_RS03390 a86608ff34029e21a85ad7a6f8562f44 322 PANTHER PTHR30349 1 292 7.2E-91 T 23-04-2016 RR42_RS03390 a86608ff34029e21a85ad7a6f8562f44 322 PIRSF PIRSF017082 1 320 3.0E-79 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS03390 a86608ff34029e21a85ad7a6f8562f44 322 PANTHER PTHR30349:SF1 1 292 7.2E-91 T 23-04-2016 RR42_RS15115 001327851aa6e592f7455e9584bef679 343 Pfam PF01212 Beta-eliminating lyase 4 292 2.9E-78 T 23-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 RR42_RS15115 001327851aa6e592f7455e9584bef679 343 Gene3D G3DSA:3.40.640.10 3 251 5.5E-64 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS15115 001327851aa6e592f7455e9584bef679 343 PANTHER PTHR10289:SF8 1 338 6.5E-151 T 23-04-2016 RR42_RS15115 001327851aa6e592f7455e9584bef679 343 Gene3D G3DSA:3.90.1150.10 254 338 6.8E-17 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS15115 001327851aa6e592f7455e9584bef679 343 SUPERFAMILY SSF53383 1 335 1.93E-101 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS15115 001327851aa6e592f7455e9584bef679 343 PIRSF PIRSF038940 1 343 2.2E-161 T 23-04-2016 IPR026273 Low specificity L-threonine aldolase GO:0004793|GO:0006567 KEGG: 00260+4.1.2.48 RR42_RS15115 001327851aa6e592f7455e9584bef679 343 PANTHER PTHR10289 1 338 6.5E-151 T 23-04-2016 RR42_RS07970 73a1448d41726e147288b7e1f193a591 225 Gene3D G3DSA:3.90.850.10 42 204 1.4E-5 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RR42_RS07970 73a1448d41726e147288b7e1f193a591 225 Pfam PF11010 Protein of unknown function (DUF2848) 24 216 4.6E-84 T 23-04-2016 IPR021269 Protein of unknown function DUF2848 RR42_RS07970 73a1448d41726e147288b7e1f193a591 225 SUPERFAMILY SSF56529 37 205 8.85E-14 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RR42_RS05430 ff0ba05283b3e7d8524f1bee8b0ba8d1 188 Gene3D G3DSA:1.10.10.10 118 182 6.6E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS05430 ff0ba05283b3e7d8524f1bee8b0ba8d1 188 Pfam PF08281 Sigma-70, region 4 126 173 5.7E-17 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS05430 ff0ba05283b3e7d8524f1bee8b0ba8d1 188 Pfam PF04542 Sigma-70 region 2 15 75 7.4E-5 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS05430 ff0ba05283b3e7d8524f1bee8b0ba8d1 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 7 181 3.9E-21 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS05430 ff0ba05283b3e7d8524f1bee8b0ba8d1 188 SUPERFAMILY SSF88946 10 84 9.02E-9 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS05430 ff0ba05283b3e7d8524f1bee8b0ba8d1 188 SUPERFAMILY SSF88659 117 181 1.21E-16 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS05430 ff0ba05283b3e7d8524f1bee8b0ba8d1 188 PANTHER PTHR30173 4 184 3.0E-22 T 23-04-2016 RR42_RS05430 ff0ba05283b3e7d8524f1bee8b0ba8d1 188 Gene3D G3DSA:1.10.1740.10 4 77 1.3E-8 T 23-04-2016 RR42_RS09320 82458c5351ac6a153eed066ba33229e6 520 SUPERFAMILY SSF56801 3 500 4.19E-133 T 23-04-2016 RR42_RS09320 82458c5351ac6a153eed066ba33229e6 520 ProSitePatterns PS00455 Putative AMP-binding domain signature. 157 168 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS09320 82458c5351ac6a153eed066ba33229e6 520 PANTHER PTHR24096 5 501 1.7E-127 T 23-04-2016 RR42_RS09320 82458c5351ac6a153eed066ba33229e6 520 Pfam PF13193 AMP-binding enzyme C-terminal domain 413 487 8.0E-20 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RR42_RS09320 82458c5351ac6a153eed066ba33229e6 520 Pfam PF00501 AMP-binding enzyme 7 403 9.7E-80 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS09320 82458c5351ac6a153eed066ba33229e6 520 Gene3D G3DSA:3.40.50.980 4 162 3.2E-27 T 23-04-2016 RR42_RS09320 82458c5351ac6a153eed066ba33229e6 520 Gene3D G3DSA:3.30.300.30 398 497 4.6E-30 T 23-04-2016 RR42_RS09320 82458c5351ac6a153eed066ba33229e6 520 Gene3D G3DSA:3.40.50.980 163 313 8.1E-32 T 23-04-2016 RR42_RS09320 82458c5351ac6a153eed066ba33229e6 520 Gene3D G3DSA:2.30.38.10 323 393 8.4E-23 T 23-04-2016 RR42_RS17090 bd25e68c6138a2a51d508e717cec93d7 166 PANTHER PTHR11241 23 159 6.9E-35 T 23-04-2016 RR42_RS17090 bd25e68c6138a2a51d508e717cec93d7 166 Pfam PF00692 dUTPase 20 158 1.6E-29 T 23-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 RR42_RS17090 bd25e68c6138a2a51d508e717cec93d7 166 SUPERFAMILY SSF51283 20 159 3.66E-41 T 23-04-2016 IPR029054 dUTPase-like RR42_RS17090 bd25e68c6138a2a51d508e717cec93d7 166 Gene3D G3DSA:2.70.40.10 9 160 4.8E-45 T 23-04-2016 IPR029054 dUTPase-like RR42_RS17090 bd25e68c6138a2a51d508e717cec93d7 166 TIGRFAM TIGR00576 dut: dUTP diphosphatase 20 158 1.5E-38 T 23-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 RR42_RS30460 b657958b076db6cb6dccee00bd9d36f3 131 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 105 7.3E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS30460 b657958b076db6cb6dccee00bd9d36f3 131 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 115 131 7.3E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS30460 b657958b076db6cb6dccee00bd9d36f3 131 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 41 52 7.3E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS30460 b657958b076db6cb6dccee00bd9d36f3 131 PANTHER PTHR24322 115 131 2.2E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS30460 b657958b076db6cb6dccee00bd9d36f3 131 PANTHER PTHR24322 2 99 2.2E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS30460 b657958b076db6cb6dccee00bd9d36f3 131 SUPERFAMILY SSF51735 3 130 3.36E-30 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS30460 b657958b076db6cb6dccee00bd9d36f3 131 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 41 52 9.7E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS30460 b657958b076db6cb6dccee00bd9d36f3 131 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 95 103 9.7E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS30460 b657958b076db6cb6dccee00bd9d36f3 131 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 115 131 9.7E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS30460 b657958b076db6cb6dccee00bd9d36f3 131 Pfam PF00106 short chain dehydrogenase 13 130 1.2E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS30460 b657958b076db6cb6dccee00bd9d36f3 131 Gene3D G3DSA:3.40.50.720 2 131 2.7E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS15365 1514843304193ed174870393de4a002c 184 Pfam PF01613 Flavin reductase like domain 29 179 2.1E-36 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 RR42_RS15365 1514843304193ed174870393de4a002c 184 PANTHER PTHR30466:SF1 4 177 3.8E-37 T 23-04-2016 RR42_RS15365 1514843304193ed174870393de4a002c 184 SUPERFAMILY SSF50475 20 178 3.48E-46 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RR42_RS15365 1514843304193ed174870393de4a002c 184 Gene3D G3DSA:2.30.110.10 16 177 2.4E-57 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RR42_RS15365 1514843304193ed174870393de4a002c 184 SMART SM00903 28 178 2.2E-62 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 RR42_RS15365 1514843304193ed174870393de4a002c 184 PANTHER PTHR30466 4 177 3.8E-37 T 23-04-2016 RR42_RS14280 ec7ec9f88e2d41ddbc000341b4b624c6 55 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 1 28 4.0E-9 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RR42_RS14280 ec7ec9f88e2d41ddbc000341b4b624c6 55 Pfam PF01165 Ribosomal protein S21 1 42 2.8E-10 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RR42_RS14280 ec7ec9f88e2d41ddbc000341b4b624c6 55 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 1 44 3.2E-10 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RR42_RS08580 c614bfbb82c92023f253aa900ca8d8f3 302 PANTHER PTHR35862:SF1 6 302 3.5E-110 T 23-04-2016 RR42_RS08580 c614bfbb82c92023f253aa900ca8d8f3 302 PANTHER PTHR35862 6 302 3.5E-110 T 23-04-2016 RR42_RS08580 c614bfbb82c92023f253aa900ca8d8f3 302 Pfam PF04865 Baseplate J-like protein 119 261 1.1E-23 T 23-04-2016 IPR006949 Baseplate protein J-like RR42_RS08580 c614bfbb82c92023f253aa900ca8d8f3 302 PIRSF PIRSF020481 3 301 1.2E-110 T 23-04-2016 IPR014507 Baseplate assembly protein J, predicted RR42_RS07400 70b76f2332a4bcd9ae6d18de9e6fce2d 150 PANTHER PTHR31793:SF7 7 141 6.1E-59 T 23-04-2016 RR42_RS07400 70b76f2332a4bcd9ae6d18de9e6fce2d 150 SUPERFAMILY SSF54637 8 141 1.01E-36 T 23-04-2016 IPR029069 HotDog domain RR42_RS07400 70b76f2332a4bcd9ae6d18de9e6fce2d 150 PANTHER PTHR31793 7 141 6.1E-59 T 23-04-2016 RR42_RS07400 70b76f2332a4bcd9ae6d18de9e6fce2d 150 Gene3D G3DSA:3.10.129.10 3 143 2.0E-51 T 23-04-2016 IPR029069 HotDog domain RR42_RS07400 70b76f2332a4bcd9ae6d18de9e6fce2d 150 Pfam PF03061 Thioesterase superfamily 27 109 1.5E-13 T 23-04-2016 IPR006683 Thioesterase domain RR42_RS13565 7c704858f1ed2f4141d7bf1616f81ee5 563 Gene3D G3DSA:3.10.350.10 348 390 4.0E-4 T 23-04-2016 IPR018392 LysM domain RR42_RS13565 7c704858f1ed2f4141d7bf1616f81ee5 563 Gene3D G3DSA:1.10.530.10 113 273 5.1E-46 T 23-04-2016 RR42_RS13565 7c704858f1ed2f4141d7bf1616f81ee5 563 PANTHER PTHR21666:SF206 69 474 2.4E-107 T 23-04-2016 RR42_RS13565 7c704858f1ed2f4141d7bf1616f81ee5 563 Pfam PF01476 LysM domain 429 463 2.3E-4 T 23-04-2016 IPR018392 LysM domain RR42_RS13565 7c704858f1ed2f4141d7bf1616f81ee5 563 SMART SM00257 420 465 0.015 T 23-04-2016 IPR018392 LysM domain RR42_RS13565 7c704858f1ed2f4141d7bf1616f81ee5 563 SMART SM00257 346 390 0.96 T 23-04-2016 IPR018392 LysM domain RR42_RS13565 7c704858f1ed2f4141d7bf1616f81ee5 563 PANTHER PTHR21666 69 474 2.4E-107 T 23-04-2016 RR42_RS13565 7c704858f1ed2f4141d7bf1616f81ee5 563 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 137 165 - T 23-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 RR42_RS13565 7c704858f1ed2f4141d7bf1616f81ee5 563 SUPERFAMILY SSF53955 116 276 4.16E-42 T 23-04-2016 IPR023346 Lysozyme-like domain RR42_RS13565 7c704858f1ed2f4141d7bf1616f81ee5 563 Gene3D G3DSA:3.10.350.10 428 464 4.4E-8 T 23-04-2016 IPR018392 LysM domain RR42_RS13565 7c704858f1ed2f4141d7bf1616f81ee5 563 SUPERFAMILY SSF54106 424 465 9.02E-6 T 23-04-2016 IPR018392 LysM domain RR42_RS13565 7c704858f1ed2f4141d7bf1616f81ee5 563 Pfam PF01464 Transglycosylase SLT domain 124 227 1.2E-25 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 RR42_RS06555 1fd5ab3f4d0c9673f089a1b883adc6be 233 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 217 5.5E-84 T 23-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 RR42_RS06555 1fd5ab3f4d0c9673f089a1b883adc6be 233 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 23-04-2016 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 RR42_RS06555 1fd5ab3f4d0c9673f089a1b883adc6be 233 Pfam PF01144 Coenzyme A transferase 6 217 2.0E-82 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RR42_RS06555 1fd5ab3f4d0c9673f089a1b883adc6be 233 SUPERFAMILY SSF100950 2 228 8.37E-91 T 23-04-2016 RR42_RS06555 1fd5ab3f4d0c9673f089a1b883adc6be 233 PANTHER PTHR13707 1 232 9.1E-144 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RR42_RS06555 1fd5ab3f4d0c9673f089a1b883adc6be 233 SMART SM00882 5 217 1.7E-96 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RR42_RS06555 1fd5ab3f4d0c9673f089a1b883adc6be 233 Gene3D G3DSA:3.40.1080.10 2 215 1.0E-103 T 23-04-2016 RR42_RS06345 ac36d502b048302cfa36de2bfd808b9d 232 Gene3D G3DSA:1.25.40.10 71 198 1.0E-25 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS06345 ac36d502b048302cfa36de2bfd808b9d 232 SMART SM00028 97 130 180.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RR42_RS06345 ac36d502b048302cfa36de2bfd808b9d 232 SMART SM00028 131 164 0.076 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RR42_RS06345 ac36d502b048302cfa36de2bfd808b9d 232 SMART SM00028 63 96 470.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RR42_RS06345 ac36d502b048302cfa36de2bfd808b9d 232 SMART SM00028 165 193 33.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RR42_RS06345 ac36d502b048302cfa36de2bfd808b9d 232 PANTHER PTHR23083 74 196 2.0E-19 T 23-04-2016 RR42_RS06345 ac36d502b048302cfa36de2bfd808b9d 232 Pfam PF13181 Tetratricopeptide repeat 134 163 0.12 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RR42_RS06345 ac36d502b048302cfa36de2bfd808b9d 232 SUPERFAMILY SSF48452 70 197 3.52E-22 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS06345 ac36d502b048302cfa36de2bfd808b9d 232 Pfam PF13432 Tetratricopeptide repeat 73 128 2.1E-8 T 23-04-2016 RR42_RS17315 2fa1605b903bfcd225acbb51b48f4576 421 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RR42_RS17315 2fa1605b903bfcd225acbb51b48f4576 421 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 25 36 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RR42_RS17315 2fa1605b903bfcd225acbb51b48f4576 421 SUPERFAMILY SSF54862 22 118 1.51E-20 T 23-04-2016 RR42_RS17315 2fa1605b903bfcd225acbb51b48f4576 421 Pfam PF02754 Cysteine-rich domain 176 259 5.2E-13 T 23-04-2016 IPR004017 Cysteine-rich domain RR42_RS17315 2fa1605b903bfcd225acbb51b48f4576 421 Pfam PF02754 Cysteine-rich domain 318 401 2.7E-12 T 23-04-2016 IPR004017 Cysteine-rich domain RR42_RS17315 2fa1605b903bfcd225acbb51b48f4576 421 PANTHER PTHR32479:SF2 14 420 2.9E-118 T 23-04-2016 RR42_RS17315 2fa1605b903bfcd225acbb51b48f4576 421 Gene3D G3DSA:1.10.1060.10 11 102 3.3E-22 T 23-04-2016 RR42_RS17315 2fa1605b903bfcd225acbb51b48f4576 421 Pfam PF12838 4Fe-4S dicluster domain 24 89 1.5E-12 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RR42_RS17315 2fa1605b903bfcd225acbb51b48f4576 421 PANTHER PTHR32479 14 420 2.9E-118 T 23-04-2016 RR42_RS17315 2fa1605b903bfcd225acbb51b48f4576 421 PIRSF PIRSF000139 7 421 1.2E-111 T 23-04-2016 IPR012257 Glycolate oxidase, iron-sulphur subunit RR42_RS29650 815961efb5b7a49de31954ddadb0e03c 229 Pfam PF14366 Domain of unknown function (DUF4410) 71 209 3.8E-34 T 23-04-2016 IPR025522 Protein of unknown function DUF4410 RR42_RS19095 86662344bce073b351b460eb6c605e5d 248 Gene3D G3DSA:3.40.50.300 9 204 8.0E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS19095 86662344bce073b351b460eb6c605e5d 248 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 12 207 26.324 T 23-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 RR42_RS19095 86662344bce073b351b460eb6c605e5d 248 SUPERFAMILY SSF52540 14 203 9.88E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS19095 86662344bce073b351b460eb6c605e5d 248 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 203 6.8E-62 T 23-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 RR42_RS19095 86662344bce073b351b460eb6c605e5d 248 Pfam PF01926 50S ribosome-binding GTPase 26 150 1.3E-15 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RR42_RS19095 86662344bce073b351b460eb6c605e5d 248 PANTHER PTHR11649 17 207 6.8E-39 T 23-04-2016 RR42_RS13875 d02efa6fcf2783f10887aaac98838ada 683 Pfam PF00474 Sodium:solute symporter family 498 613 2.1E-17 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RR42_RS13875 d02efa6fcf2783f10887aaac98838ada 683 Pfam PF00474 Sodium:solute symporter family 70 237 5.0E-31 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RR42_RS13875 d02efa6fcf2783f10887aaac98838ada 683 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 595 615 - T 23-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 RR42_RS13875 d02efa6fcf2783f10887aaac98838ada 683 PANTHER PTHR11819:SF159 469 677 3.4E-158 T 23-04-2016 RR42_RS13875 d02efa6fcf2783f10887aaac98838ada 683 PANTHER PTHR11819:SF159 358 439 3.4E-158 T 23-04-2016 RR42_RS13875 d02efa6fcf2783f10887aaac98838ada 683 PANTHER PTHR11819:SF159 41 273 3.4E-158 T 23-04-2016 RR42_RS13875 d02efa6fcf2783f10887aaac98838ada 683 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 45 681 1.5E-213 T 23-04-2016 IPR019899 Sodium/solute symporter, VC2705 subfamily RR42_RS13875 d02efa6fcf2783f10887aaac98838ada 683 PANTHER PTHR11819 469 677 3.4E-158 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RR42_RS13875 d02efa6fcf2783f10887aaac98838ada 683 PANTHER PTHR11819 358 439 3.4E-158 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RR42_RS13875 d02efa6fcf2783f10887aaac98838ada 683 PANTHER PTHR11819 41 273 3.4E-158 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RR42_RS17620 5f141689e536b0fbf10a188bd508e91a 188 PIRSF PIRSF006162 28 187 1.8E-36 T 23-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 RR42_RS17620 5f141689e536b0fbf10a188bd508e91a 188 SUPERFAMILY SSF101307 32 186 5.36E-34 T 23-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 RR42_RS17620 5f141689e536b0fbf10a188bd508e91a 188 Pfam PF04608 Phosphatidylglycerophosphatase A 38 185 4.1E-47 T 23-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 RR42_RS17620 5f141689e536b0fbf10a188bd508e91a 188 PANTHER PTHR36305 24 188 3.0E-40 T 23-04-2016 RR42_RS16080 c7e0ba55c3806e39182c47494f48d4c9 246 PANTHER PTHR34848 44 243 5.1E-71 T 23-04-2016 RR42_RS16080 c7e0ba55c3806e39182c47494f48d4c9 246 Gene3D G3DSA:3.40.50.300 55 241 1.2E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS16080 c7e0ba55c3806e39182c47494f48d4c9 246 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 56 239 1.3E-57 T 23-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 RR42_RS16080 c7e0ba55c3806e39182c47494f48d4c9 246 SUPERFAMILY SSF52540 55 241 3.78E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14330 a807dd4dc1f4caa926ade576e36aeb77 165 PANTHER PTHR36926 4 156 1.2E-29 T 23-04-2016 RR42_RS14330 a807dd4dc1f4caa926ade576e36aeb77 165 Pfam PF02674 Colicin V production protein 6 147 2.8E-34 T 23-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 RR42_RS14330 a807dd4dc1f4caa926ade576e36aeb77 165 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 82 99 - T 23-04-2016 IPR000540 Flagellar motor protein MotA, conserved site RR42_RS14330 a807dd4dc1f4caa926ade576e36aeb77 165 PANTHER PTHR36926:SF1 4 156 1.2E-29 T 23-04-2016 RR42_RS18680 a75c588d6a743a3fea1144c1a9ed3323 378 PANTHER PTHR30408 1 146 1.3E-21 T 23-04-2016 RR42_RS18680 a75c588d6a743a3fea1144c1a9ed3323 378 SUPERFAMILY SSF116734 155 366 5.56E-25 T 23-04-2016 RR42_RS18680 a75c588d6a743a3fea1144c1a9ed3323 378 SUPERFAMILY SSF116734 5 142 6.21E-26 T 23-04-2016 RR42_RS18680 a75c588d6a743a3fea1144c1a9ed3323 378 Pfam PF01420 Type I restriction modification DNA specificity domain 8 122 6.1E-10 T 23-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RR42_RS18680 a75c588d6a743a3fea1144c1a9ed3323 378 PANTHER PTHR30408:SF2 1 146 1.3E-21 T 23-04-2016 RR42_RS05920 73257c27b11ce2c729f04424492c82ad 345 PIRSF PIRSF005485 1 345 8.7E-108 T 23-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 RR42_RS05920 73257c27b11ce2c729f04424492c82ad 345 Gene3D G3DSA:1.10.10.10 1 83 1.3E-36 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS05920 73257c27b11ce2c729f04424492c82ad 345 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 5 72 2.9E-5 T 23-04-2016 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 RR42_RS05920 73257c27b11ce2c729f04424492c82ad 345 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 2 341 1.4E-95 T 23-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 RR42_RS05920 73257c27b11ce2c729f04424492c82ad 345 SUPERFAMILY SSF55781 70 344 1.04E-58 T 23-04-2016 IPR029016 GAF domain-like RR42_RS05920 73257c27b11ce2c729f04424492c82ad 345 Gene3D G3DSA:3.30.450.40 180 344 1.6E-41 T 23-04-2016 IPR029016 GAF domain-like RR42_RS05920 73257c27b11ce2c729f04424492c82ad 345 SUPERFAMILY SSF46785 1 80 1.68E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS05920 73257c27b11ce2c729f04424492c82ad 345 PANTHER PTHR34824 1 345 4.3E-99 T 23-04-2016 RR42_RS05920 73257c27b11ce2c729f04424492c82ad 345 Pfam PF01628 HrcA protein C terminal domain 109 328 6.4E-58 T 23-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 RR42_RS05920 73257c27b11ce2c729f04424492c82ad 345 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 335 26.223 T 23-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 RR42_RS07990 eb644a8ebd40889a28ee93545441cdc4 334 Gene3D G3DSA:1.10.150.130 56 156 5.7E-4 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal RR42_RS07990 eb644a8ebd40889a28ee93545441cdc4 334 Gene3D G3DSA:1.10.443.10 191 328 2.5E-24 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RR42_RS07990 eb644a8ebd40889a28ee93545441cdc4 334 SUPERFAMILY SSF56349 56 325 3.24E-41 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RR42_RS07990 eb644a8ebd40889a28ee93545441cdc4 334 Pfam PF00589 Phage integrase family 194 325 4.2E-13 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RR42_RS10675 c33823d85b71a121d20331591c6bffc5 101 SUPERFAMILY SSF54427 2 98 3.12E-15 T 23-04-2016 IPR032710 NTF2-like domain RR42_RS10675 c33823d85b71a121d20331591c6bffc5 101 Gene3D G3DSA:3.10.450.50 2 98 1.1E-12 T 23-04-2016 IPR032710 NTF2-like domain RR42_RS10675 c33823d85b71a121d20331591c6bffc5 101 Pfam PF12680 SnoaL-like domain 2 75 4.4E-10 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain RR42_RS13175 40704aade3e36ceeb9bdf1a83eacff2e 289 Gene3D G3DSA:3.60.10.10 1 286 5.2E-25 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RR42_RS13175 40704aade3e36ceeb9bdf1a83eacff2e 289 SUPERFAMILY SSF56219 3 286 1.14E-36 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RR42_RS13175 40704aade3e36ceeb9bdf1a83eacff2e 289 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 279 2.7E-21 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RR42_RS29365 84af241b9de49f25b1aa5b01a6fb2044 108 PANTHER PTHR22924:SF49 2 107 1.2E-16 T 23-04-2016 RR42_RS29365 84af241b9de49f25b1aa5b01a6fb2044 108 SUPERFAMILY SSF63380 42 106 3.4E-13 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RR42_RS29365 84af241b9de49f25b1aa5b01a6fb2044 108 Pfam PF00970 Oxidoreductase FAD-binding domain 48 105 2.4E-4 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain RR42_RS29365 84af241b9de49f25b1aa5b01a6fb2044 108 PANTHER PTHR22924 2 107 1.2E-16 T 23-04-2016 RR42_RS29365 84af241b9de49f25b1aa5b01a6fb2044 108 SUPERFAMILY SSF46458 2 38 6.09E-6 T 23-04-2016 IPR009050 Globin-like RR42_RS29365 84af241b9de49f25b1aa5b01a6fb2044 108 Gene3D G3DSA:2.40.30.10 43 105 1.3E-14 T 23-04-2016 RR42_RS29365 84af241b9de49f25b1aa5b01a6fb2044 108 Gene3D G3DSA:1.10.490.10 2 36 9.1E-6 T 23-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 RR42_RS23865 62453628e7fa7505bcd951f90707a1cc 98 PANTHER PTHR11815:SF1 21 98 1.1E-37 T 23-04-2016 RR42_RS23865 62453628e7fa7505bcd951f90707a1cc 98 SUPERFAMILY SSF56059 21 97 7.78E-30 T 23-04-2016 RR42_RS23865 62453628e7fa7505bcd951f90707a1cc 98 Pfam PF08442 ATP-grasp domain 23 98 7.4E-29 T 23-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RR42_RS23865 62453628e7fa7505bcd951f90707a1cc 98 PANTHER PTHR11815 21 98 1.1E-37 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 RR42_RS23865 62453628e7fa7505bcd951f90707a1cc 98 Gene3D G3DSA:3.30.1490.20 43 98 1.2E-22 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RR42_RS15105 79cfade5c69bb0d2cf293d3a616f8fc4 75 SUPERFAMILY SSF64307 3 74 2.09E-25 T 23-04-2016 IPR001455 TusA-like domain RR42_RS15105 79cfade5c69bb0d2cf293d3a616f8fc4 75 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 23-04-2016 IPR001455 TusA-like domain RR42_RS15105 79cfade5c69bb0d2cf293d3a616f8fc4 75 Gene3D G3DSA:3.30.110.40 1 74 1.8E-31 T 23-04-2016 IPR001455 TusA-like domain RR42_RS15105 79cfade5c69bb0d2cf293d3a616f8fc4 75 Pfam PF01206 Sulfurtransferase TusA 5 74 4.1E-25 T 23-04-2016 IPR001455 TusA-like domain RR42_RS15105 79cfade5c69bb0d2cf293d3a616f8fc4 75 PANTHER PTHR33279 1 75 1.3E-20 T 23-04-2016 RR42_RS12220 c867fb3c624dbf71436348fb02be7f77 425 PANTHER PTHR23505 7 383 3.3E-33 T 23-04-2016 RR42_RS12220 c867fb3c624dbf71436348fb02be7f77 425 SUPERFAMILY SSF103473 11 410 3.01E-55 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS12220 c867fb3c624dbf71436348fb02be7f77 425 Gene3D G3DSA:1.20.1250.20 14 195 9.9E-24 T 23-04-2016 RR42_RS12220 c867fb3c624dbf71436348fb02be7f77 425 Gene3D G3DSA:1.20.1250.20 222 402 1.5E-17 T 23-04-2016 RR42_RS12220 c867fb3c624dbf71436348fb02be7f77 425 PANTHER PTHR23505:SF8 7 383 3.3E-33 T 23-04-2016 RR42_RS12220 c867fb3c624dbf71436348fb02be7f77 425 Pfam PF07690 Major Facilitator Superfamily 25 358 4.8E-35 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS00995 77191dabc1c808401a6a420b5b3cd7da 509 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 54 491 2.3E-65 T 23-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RR42_RS00995 77191dabc1c808401a6a420b5b3cd7da 509 PANTHER PTHR10283 30 496 3.0E-62 T 23-04-2016 RR42_RS00995 77191dabc1c808401a6a420b5b3cd7da 509 Pfam PF00939 Sodium:sulfate symporter transmembrane region 41 496 6.2E-70 T 23-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RR42_RS13940 b14729647c14168efa06c040da77b0df 135 PANTHER PTHR34309 1 133 2.3E-53 T 23-04-2016 RR42_RS13940 b14729647c14168efa06c040da77b0df 135 PANTHER PTHR34309:SF4 1 133 2.3E-53 T 23-04-2016 RR42_RS13940 b14729647c14168efa06c040da77b0df 135 SUPERFAMILY SSF143744 2 133 6.8E-37 T 23-04-2016 RR42_RS13940 b14729647c14168efa06c040da77b0df 135 Pfam PF03928 Haem-degrading 7 130 2.6E-32 T 23-04-2016 IPR005624 Haem-degrading RR42_RS03765 c1c821efbaf794f4880979ed15d3c884 281 SUPERFAMILY SSF53927 22 274 1.05E-79 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RR42_RS03765 c1c821efbaf794f4880979ed15d3c884 281 PIRSF PIRSF015626 5 279 6.9E-86 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 RR42_RS03765 c1c821efbaf794f4880979ed15d3c884 281 Hamap MF_00187 Protein FdhD [fdhD]. 12 275 36.735 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 RR42_RS03765 c1c821efbaf794f4880979ed15d3c884 281 Gene3D G3DSA:3.10.20.10 39 125 4.8E-29 T 23-04-2016 RR42_RS03765 c1c821efbaf794f4880979ed15d3c884 281 Gene3D G3DSA:3.40.140.10 139 276 4.3E-50 T 23-04-2016 RR42_RS03765 c1c821efbaf794f4880979ed15d3c884 281 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 33 275 1.3E-68 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 RR42_RS03765 c1c821efbaf794f4880979ed15d3c884 281 PANTHER PTHR30592:SF1 2 274 5.8E-108 T 23-04-2016 RR42_RS03765 c1c821efbaf794f4880979ed15d3c884 281 PANTHER PTHR30592 2 274 5.8E-108 T 23-04-2016 RR42_RS03765 c1c821efbaf794f4880979ed15d3c884 281 Pfam PF02634 FdhD/NarQ family 37 275 6.2E-77 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 RR42_RS19155 551b45bd6b96b7d505b3bb9a8a8ee7be 447 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 22 431 1.7E-128 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RR42_RS19155 551b45bd6b96b7d505b3bb9a8a8ee7be 447 SUPERFAMILY SSF103491 11 426 6.54E-132 T 23-04-2016 IPR023201 SecY subunit domain RR42_RS19155 551b45bd6b96b7d505b3bb9a8a8ee7be 447 ProSitePatterns PS00756 Protein secY signature 2. 172 189 - T 23-04-2016 IPR030659 SecY conserved site RR42_RS19155 551b45bd6b96b7d505b3bb9a8a8ee7be 447 PANTHER PTHR10906 12 447 5.7E-215 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RR42_RS19155 551b45bd6b96b7d505b3bb9a8a8ee7be 447 PANTHER PTHR10906:SF2 12 447 5.7E-215 T 23-04-2016 RR42_RS19155 551b45bd6b96b7d505b3bb9a8a8ee7be 447 Pfam PF00344 SecY translocase 78 419 3.8E-115 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RR42_RS19155 551b45bd6b96b7d505b3bb9a8a8ee7be 447 ProSitePatterns PS00755 Protein secY signature 1. 78 97 - T 23-04-2016 IPR030659 SecY conserved site RR42_RS19155 551b45bd6b96b7d505b3bb9a8a8ee7be 447 Gene3D G3DSA:1.10.3370.10 12 439 1.5E-165 T 23-04-2016 IPR023201 SecY subunit domain RR42_RS19155 551b45bd6b96b7d505b3bb9a8a8ee7be 447 PIRSF PIRSF004557 2 442 9.1E-126 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RR42_RS19155 551b45bd6b96b7d505b3bb9a8a8ee7be 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 271 290 2.0E-93 T 23-04-2016 RR42_RS19155 551b45bd6b96b7d505b3bb9a8a8ee7be 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 372 390 2.0E-93 T 23-04-2016 RR42_RS19155 551b45bd6b96b7d505b3bb9a8a8ee7be 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 77 97 2.0E-93 T 23-04-2016 RR42_RS19155 551b45bd6b96b7d505b3bb9a8a8ee7be 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 153 178 2.0E-93 T 23-04-2016 RR42_RS19155 551b45bd6b96b7d505b3bb9a8a8ee7be 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 404 422 2.0E-93 T 23-04-2016 RR42_RS19155 551b45bd6b96b7d505b3bb9a8a8ee7be 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 179 202 2.0E-93 T 23-04-2016 RR42_RS19155 551b45bd6b96b7d505b3bb9a8a8ee7be 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 317 339 2.0E-93 T 23-04-2016 RR42_RS19155 551b45bd6b96b7d505b3bb9a8a8ee7be 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 118 141 2.0E-93 T 23-04-2016 RR42_RS19155 551b45bd6b96b7d505b3bb9a8a8ee7be 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 25 43 2.0E-93 T 23-04-2016 RR42_RS19155 551b45bd6b96b7d505b3bb9a8a8ee7be 447 Hamap MF_01465 Protein translocase subunit SecY [secY]. 12 435 29.612 T 23-04-2016 IPR026593 Protein translocase subunit SecY RR42_RS12700 e681ed439371153af0a5bd1d9430ba5a 256 SUPERFAMILY SSF81606 8 241 2.75E-64 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RR42_RS12700 e681ed439371153af0a5bd1d9430ba5a 256 Pfam PF13672 Protein phosphatase 2C 22 204 1.4E-16 T 23-04-2016 RR42_RS12700 e681ed439371153af0a5bd1d9430ba5a 256 PANTHER PTHR13832 12 248 4.0E-46 T 23-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 RR42_RS12700 e681ed439371153af0a5bd1d9430ba5a 256 PANTHER PTHR13832:SF278 12 248 4.0E-46 T 23-04-2016 RR42_RS12700 e681ed439371153af0a5bd1d9430ba5a 256 Gene3D G3DSA:3.60.40.10 7 240 2.6E-64 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RR42_RS12700 e681ed439371153af0a5bd1d9430ba5a 256 SMART SM00332 1 239 3.7E-24 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RR42_RS12700 e681ed439371153af0a5bd1d9430ba5a 256 SMART SM00331 15 241 4.3E-26 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RR42_RS06900 1f4448d4ee53605e4fa9dab13f1521fd 172 SMART SM00506 25 160 0.0029 T 23-04-2016 IPR002589 Macro domain RR42_RS06900 1f4448d4ee53605e4fa9dab13f1521fd 172 SUPERFAMILY SSF52949 26 168 3.87E-20 T 23-04-2016 RR42_RS06900 1f4448d4ee53605e4fa9dab13f1521fd 172 Pfam PF01661 Macro domain 43 137 5.0E-6 T 23-04-2016 IPR002589 Macro domain RR42_RS06900 1f4448d4ee53605e4fa9dab13f1521fd 172 Gene3D G3DSA:3.40.220.10 1 168 7.2E-44 T 23-04-2016 RR42_RS18115 e160045dc10e2e1d2abbbdf596ecb972 337 SUPERFAMILY SSF53335 14 117 2.62E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS18115 e160045dc10e2e1d2abbbdf596ecb972 337 SUPERFAMILY SSF53335 221 320 2.62E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS18115 e160045dc10e2e1d2abbbdf596ecb972 337 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 13 319 4.5E-100 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RR42_RS18115 e160045dc10e2e1d2abbbdf596ecb972 337 Gene3D G3DSA:3.40.50.150 14 114 1.4E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS18115 e160045dc10e2e1d2abbbdf596ecb972 337 Gene3D G3DSA:3.40.50.150 224 320 1.4E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS18115 e160045dc10e2e1d2abbbdf596ecb972 337 PANTHER PTHR11265:SF0 12 322 1.2E-133 T 23-04-2016 RR42_RS18115 e160045dc10e2e1d2abbbdf596ecb972 337 PIRSF PIRSF004486 9 321 1.6E-95 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RR42_RS18115 e160045dc10e2e1d2abbbdf596ecb972 337 PANTHER PTHR11265 12 322 1.2E-133 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RR42_RS18115 e160045dc10e2e1d2abbbdf596ecb972 337 Pfam PF01795 MraW methylase family 12 319 2.3E-96 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RR42_RS18115 e160045dc10e2e1d2abbbdf596ecb972 337 Gene3D G3DSA:1.10.150.170 116 223 2.1E-37 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RR42_RS18115 e160045dc10e2e1d2abbbdf596ecb972 337 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 14 320 37.517 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RR42_RS18115 e160045dc10e2e1d2abbbdf596ecb972 337 SUPERFAMILY SSF81799 118 221 4.19E-32 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 PANTHER PTHR22617:SF20 1179 1421 2.3E-98 T 23-04-2016 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 PANTHER PTHR22617:SF20 8 20 2.3E-98 T 23-04-2016 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 PANTHER PTHR22617:SF20 1486 1842 2.3E-98 T 23-04-2016 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1557 1693 8.9E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 SUPERFAMILY SSF47226 770 892 3.01E-24 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 Pfam PF00072 Response regulator receiver domain 1879 1990 7.2E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 SUPERFAMILY SSF55874 1510 1692 3.42E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 SMART SM00073 1178 1286 0.013 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 SMART SM00073 771 868 4.5E-11 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 SMART SM00073 987 1083 0.029 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 Pfam PF01584 CheW-like domain 1698 1826 4.1E-19 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 Gene3D G3DSA:1.20.120.160 1160 1281 5.7E-23 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 Gene3D G3DSA:1.20.120.160 980 1091 5.7E-21 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 SMART SM00260 1686 1826 3.4E-9 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 Gene3D G3DSA:3.40.50.2300 1875 1997 1.1E-35 T 23-04-2016 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 SUPERFAMILY SSF52172 1876 1996 2.7E-35 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 SMART SM00387 1553 1694 6.5E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 Gene3D G3DSA:1.20.120.160 770 906 1.8E-25 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 Gene3D G3DSA:1.20.120.160 88 167 9.3E-4 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 PANTHER PTHR22617 1179 1421 2.3E-98 T 23-04-2016 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 PANTHER PTHR22617 8 20 2.3E-98 T 23-04-2016 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 PANTHER PTHR22617 1486 1842 2.3E-98 T 23-04-2016 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 SUPERFAMILY SSF47226 989 1100 1.7E-18 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 SUPERFAMILY SSF47226 1183 1298 8.51E-19 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 Gene3D G3DSA:1.10.287.560 1374 1427 9.7E-4 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 SMART SM01231 1372 1508 1.0E-4 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 Pfam PF01627 Hpt domain 773 866 9.7E-15 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 Pfam PF01627 Hpt domain 1186 1260 7.0E-13 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 Pfam PF01627 Hpt domain 990 1080 4.6E-11 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 SUPERFAMILY SSF50341 1693 1823 1.2E-24 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 Gene3D G3DSA:2.30.30.40 1781 1823 1.4E-18 T 23-04-2016 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 Gene3D G3DSA:2.30.30.40 1694 1715 1.4E-18 T 23-04-2016 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 SMART SM00448 1877 1990 9.3E-32 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1678 1691 1.2E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1638 1648 1.2E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1598 1612 1.2E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1654 1672 1.2E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 Gene3D G3DSA:3.30.565.10 1509 1693 3.3E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS04265 9f32b2fb7fb5917c1bcb7ddc084d875d 2015 SUPERFAMILY SSF47226 69 172 2.49E-9 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RR42_RS29255 fa132d2dce2303723b15d11268205b22 198 PANTHER PTHR11365:SF2 1 198 4.0E-93 T 23-04-2016 RR42_RS29255 fa132d2dce2303723b15d11268205b22 198 PANTHER PTHR11365 1 198 4.0E-93 T 23-04-2016 RR42_RS29255 fa132d2dce2303723b15d11268205b22 198 Pfam PF01968 Hydantoinase/oxoprolinase 1 198 6.5E-69 T 23-04-2016 IPR002821 Hydantoinase/oxoprolinase GO:0016787 RR42_RS02055 1672345ff7725032e08fb5c3bc614d19 201 PANTHER PTHR23327 1 135 4.1E-20 T 23-04-2016 RR42_RS02055 1672345ff7725032e08fb5c3bc614d19 201 PANTHER PTHR23327:SF0 1 135 4.1E-20 T 23-04-2016 RR42_RS02055 1672345ff7725032e08fb5c3bc614d19 201 SMART SM00464 3 197 3.4E-10 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 RR42_RS02055 1672345ff7725032e08fb5c3bc614d19 201 SUPERFAMILY SSF88697 4 196 1.66E-48 T 23-04-2016 IPR015947 PUA-like domain RR42_RS02055 1672345ff7725032e08fb5c3bc614d19 201 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 4 196 1.6E-16 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 RR42_RS19145 2e060e5f6237d1cc77576e6ad8007f22 38 Pfam PF00444 Ribosomal protein L36 1 38 2.1E-19 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19145 2e060e5f6237d1cc77576e6ad8007f22 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19145 2e060e5f6237d1cc77576e6ad8007f22 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 3.1E-20 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19145 2e060e5f6237d1cc77576e6ad8007f22 38 PANTHER PTHR18804 1 38 7.5E-19 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19145 2e060e5f6237d1cc77576e6ad8007f22 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 6.0E-10 T 23-04-2016 RR42_RS19145 2e060e5f6237d1cc77576e6ad8007f22 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.765 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19145 2e060e5f6237d1cc77576e6ad8007f22 38 SUPERFAMILY SSF57840 1 38 7.59E-17 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19455 ffd0527e8d127a32f9cb8f82ad224962 193 PANTHER PTHR10204 7 166 2.0E-48 T 23-04-2016 RR42_RS19455 ffd0527e8d127a32f9cb8f82ad224962 193 Pfam PF02525 Flavodoxin-like fold 9 170 2.3E-44 T 23-04-2016 IPR003680 Flavodoxin-like fold RR42_RS19455 ffd0527e8d127a32f9cb8f82ad224962 193 PANTHER PTHR10204:SF42 7 166 2.0E-48 T 23-04-2016 RR42_RS19455 ffd0527e8d127a32f9cb8f82ad224962 193 Gene3D G3DSA:3.40.50.360 9 179 6.1E-43 T 23-04-2016 IPR029039 Flavoprotein-like domain RR42_RS19455 ffd0527e8d127a32f9cb8f82ad224962 193 SUPERFAMILY SSF52218 9 181 3.98E-44 T 23-04-2016 IPR029039 Flavoprotein-like domain RR42_RS37705 97466ad2244198f53643831e7513e89e 592 SUPERFAMILY SSF51126 38 294 2.32E-52 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor RR42_RS37705 97466ad2244198f53643831e7513e89e 592 SUPERFAMILY SSF51126 365 380 2.32E-52 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor RR42_RS37705 97466ad2244198f53643831e7513e89e 592 PANTHER PTHR32093:SF41 8 374 1.5E-42 T 23-04-2016 RR42_RS37705 97466ad2244198f53643831e7513e89e 592 SMART SM00912 44 164 5.3E-32 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal RR42_RS37705 97466ad2244198f53643831e7513e89e 592 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 327 361 0.12 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RR42_RS37705 97466ad2244198f53643831e7513e89e 592 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 403 442 3.3E-5 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RR42_RS37705 97466ad2244198f53643831e7513e89e 592 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 363 401 0.0085 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RR42_RS37705 97466ad2244198f53643831e7513e89e 592 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 62 159 3.9E-16 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal RR42_RS37705 97466ad2244198f53643831e7513e89e 592 Pfam PF05860 haemagglutination activity domain 42 162 2.5E-28 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal RR42_RS37705 97466ad2244198f53643831e7513e89e 592 Gene3D G3DSA:2.160.20.10 326 358 5.6E-80 T 23-04-2016 IPR012334 Pectin lyase fold RR42_RS37705 97466ad2244198f53643831e7513e89e 592 Gene3D G3DSA:2.160.20.10 37 293 5.6E-80 T 23-04-2016 IPR012334 Pectin lyase fold RR42_RS37705 97466ad2244198f53643831e7513e89e 592 PANTHER PTHR32093 8 374 1.5E-42 T 23-04-2016 RR42_RS20535 6fdbb32b80cf9cc87c2a92dc839ebd81 337 PANTHER PTHR10996 1 321 7.2E-99 T 23-04-2016 RR42_RS20535 6fdbb32b80cf9cc87c2a92dc839ebd81 337 Gene3D G3DSA:3.40.50.720 114 297 7.4E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS20535 6fdbb32b80cf9cc87c2a92dc839ebd81 337 Gene3D G3DSA:3.40.50.720 1 113 2.2E-28 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS20535 6fdbb32b80cf9cc87c2a92dc839ebd81 337 PANTHER PTHR10996:SF127 1 321 7.2E-99 T 23-04-2016 RR42_RS20535 6fdbb32b80cf9cc87c2a92dc839ebd81 337 SUPERFAMILY SSF52283 1 136 4.04E-22 T 23-04-2016 RR42_RS20535 6fdbb32b80cf9cc87c2a92dc839ebd81 337 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 24 321 8.6E-17 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RR42_RS20535 6fdbb32b80cf9cc87c2a92dc839ebd81 337 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 296 4.5E-52 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RR42_RS20535 6fdbb32b80cf9cc87c2a92dc839ebd81 337 SUPERFAMILY SSF51735 106 296 1.98E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS24645 3153cb12604755a9eb4e1f53e9b2d2c1 213 Pfam PF00355 Rieske [2Fe-2S] domain 56 137 2.8E-19 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RR42_RS24645 3153cb12604755a9eb4e1f53e9b2d2c1 213 SUPERFAMILY SSF50022 48 171 3.01E-34 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RR42_RS24645 3153cb12604755a9eb4e1f53e9b2d2c1 213 SUPERFAMILY SSF55961 161 213 1.35E-7 T 23-04-2016 RR42_RS24645 3153cb12604755a9eb4e1f53e9b2d2c1 213 Gene3D G3DSA:2.102.10.10 53 171 5.8E-31 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RR42_RS24645 3153cb12604755a9eb4e1f53e9b2d2c1 213 PANTHER PTHR21266 49 213 1.3E-44 T 23-04-2016 RR42_RS16440 90f0710f1c9ba5311f2c9d62f3bc8264 478 Gene3D G3DSA:2.30.40.10 5 68 2.6E-18 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS16440 90f0710f1c9ba5311f2c9d62f3bc8264 478 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 7 460 1.5E-146 T 23-04-2016 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: REACT_18266 RR42_RS16440 90f0710f1c9ba5311f2c9d62f3bc8264 478 Gene3D G3DSA:3.20.20.140 69 382 3.3E-100 T 23-04-2016 RR42_RS16440 90f0710f1c9ba5311f2c9d62f3bc8264 478 SUPERFAMILY SSF51556 55 389 1.01E-96 T 23-04-2016 IPR032466 Metal-dependent hydrolase RR42_RS16440 90f0710f1c9ba5311f2c9d62f3bc8264 478 Pfam PF01979 Amidohydrolase family 51 443 2.8E-23 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RR42_RS16440 90f0710f1c9ba5311f2c9d62f3bc8264 478 SUPERFAMILY SSF51338 4 66 2.36E-14 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS16440 90f0710f1c9ba5311f2c9d62f3bc8264 478 PANTHER PTHR11647 1 462 1.6E-161 T 23-04-2016 RR42_RS16440 90f0710f1c9ba5311f2c9d62f3bc8264 478 SUPERFAMILY SSF51338 356 460 8.39E-30 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS16440 90f0710f1c9ba5311f2c9d62f3bc8264 478 Gene3D G3DSA:2.30.40.10 383 461 9.5E-12 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS16440 90f0710f1c9ba5311f2c9d62f3bc8264 478 PANTHER PTHR11647:SF1 1 462 1.6E-161 T 23-04-2016 RR42_RS03220 cb7b56f0d0b47817880f47c8690ffb01 302 PANTHER PTHR11609:SF6 10 298 1.3E-146 T 23-04-2016 RR42_RS03220 cb7b56f0d0b47817880f47c8690ffb01 302 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 13 298 25.424 T 23-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RR42_RS03220 cb7b56f0d0b47817880f47c8690ffb01 302 ProSitePatterns PS01058 SAICAR synthetase signature 2. 205 213 - T 23-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RR42_RS03220 cb7b56f0d0b47817880f47c8690ffb01 302 PANTHER PTHR11609 10 298 1.3E-146 T 23-04-2016 RR42_RS03220 cb7b56f0d0b47817880f47c8690ffb01 302 ProSitePatterns PS01057 SAICAR synthetase signature 1. 106 120 - T 23-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RR42_RS03220 cb7b56f0d0b47817880f47c8690ffb01 302 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 16 298 1.5E-81 T 23-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RR42_RS03220 cb7b56f0d0b47817880f47c8690ffb01 302 Gene3D G3DSA:3.30.200.20 4 117 1.8E-42 T 23-04-2016 RR42_RS03220 cb7b56f0d0b47817880f47c8690ffb01 302 Gene3D G3DSA:3.30.470.20 118 248 2.7E-56 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RR42_RS03220 cb7b56f0d0b47817880f47c8690ffb01 302 Pfam PF01259 SAICAR synthetase 16 262 4.9E-101 T 23-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RR42_RS03220 cb7b56f0d0b47817880f47c8690ffb01 302 SUPERFAMILY SSF56104 5 300 3.27E-103 T 23-04-2016 RR42_RS01895 2e7b54d311c7f5b90d3467c095db6e63 286 SUPERFAMILY SSF81452 8 286 2.62E-82 T 23-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 RR42_RS01895 2e7b54d311c7f5b90d3467c095db6e63 286 Gene3D G3DSA:1.20.120.80 82 286 2.4E-65 T 23-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 RR42_RS01895 2e7b54d311c7f5b90d3467c095db6e63 286 PANTHER PTHR11403:SF0 2 286 2.4E-99 T 23-04-2016 RR42_RS01895 2e7b54d311c7f5b90d3467c095db6e63 286 Gene3D G3DSA:1.10.287.70 7 73 7.7E-15 T 23-04-2016 RR42_RS01895 2e7b54d311c7f5b90d3467c095db6e63 286 PANTHER PTHR11403 2 286 2.4E-99 T 23-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 RR42_RS01895 2e7b54d311c7f5b90d3467c095db6e63 286 Pfam PF00510 Cytochrome c oxidase subunit III 11 285 1.5E-60 T 23-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 RR42_RS14175 a7462bfe7f8b4b3a2e945cda27e06af3 425 SUPERFAMILY SSF53218 192 339 6.28E-44 T 23-04-2016 IPR001453 MoaB/Mog domain RR42_RS14175 a7462bfe7f8b4b3a2e945cda27e06af3 425 PANTHER PTHR10192 19 425 3.1E-158 T 23-04-2016 RR42_RS14175 a7462bfe7f8b4b3a2e945cda27e06af3 425 SUPERFAMILY SSF63867 345 424 1.44E-24 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RR42_RS14175 a7462bfe7f8b4b3a2e945cda27e06af3 425 SMART SM00852 195 336 9.3E-45 T 23-04-2016 IPR001453 MoaB/Mog domain RR42_RS14175 a7462bfe7f8b4b3a2e945cda27e06af3 425 Gene3D G3DSA:3.40.980.10 178 348 2.8E-63 T 23-04-2016 IPR001453 MoaB/Mog domain RR42_RS14175 a7462bfe7f8b4b3a2e945cda27e06af3 425 Gene3D G3DSA:2.170.190.11 62 156 4.4E-26 T 23-04-2016 RR42_RS14175 a7462bfe7f8b4b3a2e945cda27e06af3 425 Pfam PF00994 Probable molybdopterin binding domain 197 335 1.6E-30 T 23-04-2016 IPR001453 MoaB/Mog domain RR42_RS14175 a7462bfe7f8b4b3a2e945cda27e06af3 425 Pfam PF03453 MoeA N-terminal region (domain I and II) 20 182 5.1E-34 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RR42_RS14175 a7462bfe7f8b4b3a2e945cda27e06af3 425 Gene3D G3DSA:2.40.340.10 349 419 2.8E-31 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RR42_RS14175 a7462bfe7f8b4b3a2e945cda27e06af3 425 SUPERFAMILY SSF63882 19 190 3.66E-51 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RR42_RS14175 a7462bfe7f8b4b3a2e945cda27e06af3 425 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 192 331 1.1E-32 T 23-04-2016 IPR001453 MoaB/Mog domain RR42_RS14175 a7462bfe7f8b4b3a2e945cda27e06af3 425 Gene3D G3DSA:3.90.105.10 157 177 2.4E-21 T 23-04-2016 RR42_RS14175 a7462bfe7f8b4b3a2e945cda27e06af3 425 Gene3D G3DSA:3.90.105.10 38 61 2.4E-21 T 23-04-2016 RR42_RS14175 a7462bfe7f8b4b3a2e945cda27e06af3 425 Pfam PF03454 MoeA C-terminal region (domain IV) 349 421 1.3E-19 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RR42_RS05115 d56fad90a185f25931f063823ecf7081 322 Gene3D G3DSA:3.40.190.10 202 284 3.1E-11 T 23-04-2016 RR42_RS05115 d56fad90a185f25931f063823ecf7081 322 Pfam PF03466 LysR substrate binding domain 104 316 1.1E-25 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS05115 d56fad90a185f25931f063823ecf7081 322 PANTHER PTHR30126 16 317 3.7E-70 T 23-04-2016 RR42_RS05115 d56fad90a185f25931f063823ecf7081 322 SUPERFAMILY SSF46785 16 126 5.78E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS05115 d56fad90a185f25931f063823ecf7081 322 Gene3D G3DSA:3.40.190.10 105 201 8.6E-22 T 23-04-2016 RR42_RS05115 d56fad90a185f25931f063823ecf7081 322 PANTHER PTHR30126:SF3 16 317 3.7E-70 T 23-04-2016 RR42_RS05115 d56fad90a185f25931f063823ecf7081 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 22 77 4.0E-20 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS05115 d56fad90a185f25931f063823ecf7081 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 55 7.5E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS05115 d56fad90a185f25931f063823ecf7081 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 45 7.5E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS05115 d56fad90a185f25931f063823ecf7081 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 55 66 7.5E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS05115 d56fad90a185f25931f063823ecf7081 322 Gene3D G3DSA:1.10.10.10 13 98 4.9E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS05115 d56fad90a185f25931f063823ecf7081 322 SUPERFAMILY SSF53850 104 317 4.85E-30 T 23-04-2016 RR42_RS17095 cce9a4438394107036869db3c6263d15 280 Gene3D G3DSA:3.10.180.10 3 141 9.2E-7 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS17095 cce9a4438394107036869db3c6263d15 280 SUPERFAMILY SSF54593 3 256 2.76E-14 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS17095 cce9a4438394107036869db3c6263d15 280 PANTHER PTHR40265 1 277 1.7E-12 T 23-04-2016 RR42_RS17095 cce9a4438394107036869db3c6263d15 280 Gene3D G3DSA:3.10.180.10 169 256 1.3E-4 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS17095 cce9a4438394107036869db3c6263d15 280 Pfam PF13468 Glyoxalase-like domain 6 184 7.0E-33 T 23-04-2016 IPR025870 Glyoxalase-like domain RR42_RS14370 ca34c58d2004999069bf377882cc74dc 274 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 243 5.9E-62 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS14370 ca34c58d2004999069bf377882cc74dc 274 Pfam PF01416 tRNA pseudouridine synthase 147 249 1.5E-29 T 23-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS14370 ca34c58d2004999069bf377882cc74dc 274 Pfam PF01416 tRNA pseudouridine synthase 9 103 9.0E-8 T 23-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS14370 ca34c58d2004999069bf377882cc74dc 274 PIRSF PIRSF001430 1 262 1.9E-69 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS14370 ca34c58d2004999069bf377882cc74dc 274 SUPERFAMILY SSF55120 1 255 3.31E-83 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS14370 ca34c58d2004999069bf377882cc74dc 274 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 248 33.424 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS14370 ca34c58d2004999069bf377882cc74dc 274 Gene3D G3DSA:3.30.70.660 107 247 7.9E-41 T 23-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS14370 ca34c58d2004999069bf377882cc74dc 274 PANTHER PTHR11142 1 255 2.5E-82 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS14370 ca34c58d2004999069bf377882cc74dc 274 Gene3D G3DSA:3.30.70.580 1 104 3.6E-35 T 23-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS26920 1cf3562c3a99ab6e73b014a6b2fb988e 233 PANTHER PTHR11807 15 233 3.4E-67 T 23-04-2016 RR42_RS26920 1cf3562c3a99ab6e73b014a6b2fb988e 233 Pfam PF01171 PP-loop family 16 200 1.4E-55 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal RR42_RS26920 1cf3562c3a99ab6e73b014a6b2fb988e 233 PANTHER PTHR11807:SF2 15 233 3.4E-67 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RR42_RS26920 1cf3562c3a99ab6e73b014a6b2fb988e 233 Gene3D G3DSA:3.40.50.620 13 182 4.7E-15 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS26920 1cf3562c3a99ab6e73b014a6b2fb988e 233 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 2 232 20.555 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RR42_RS26920 1cf3562c3a99ab6e73b014a6b2fb988e 233 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 16 201 3.4E-53 T 23-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RR42_RS26920 1cf3562c3a99ab6e73b014a6b2fb988e 233 SUPERFAMILY SSF52402 14 231 2.21E-56 T 23-04-2016 RR42_RS10290 eae688ce341c028361b5c0df39d787ee 204 SUPERFAMILY SSF46689 2 61 4.93E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS10290 eae688ce341c028361b5c0df39d787ee 204 Gene3D G3DSA:1.10.10.60 2 46 1.0E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS10290 eae688ce341c028361b5c0df39d787ee 204 Gene3D G3DSA:1.10.357.10 47 169 1.5E-24 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS10290 eae688ce341c028361b5c0df39d787ee 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 46 1.9E-9 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS10290 eae688ce341c028361b5c0df39d787ee 204 SUPERFAMILY SSF48498 68 162 2.04E-12 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RR42_RS10290 eae688ce341c028361b5c0df39d787ee 204 PANTHER PTHR30055 1 165 2.6E-13 T 23-04-2016 RR42_RS06015 b2b0ef9b74277916b6f6f7144b8ebe0b 696 Pfam PF10136 Site-specific recombinase 34 681 1.2E-235 T 23-04-2016 IPR011385 Site-specific recombinase Gcr RR42_RS06015 b2b0ef9b74277916b6f6f7144b8ebe0b 696 PIRSF PIRSF015380 1 695 3.2E-231 T 23-04-2016 IPR011385 Site-specific recombinase Gcr RR42_RS10990 87c1b8065d3997847a312b17a0c732ac 145 PIRSF PIRSF003230 1 142 1.1E-26 T 23-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RR42_RS10990 87c1b8065d3997847a312b17a0c732ac 145 Pfam PF03061 Thioesterase superfamily 23 108 2.3E-18 T 23-04-2016 IPR006683 Thioesterase domain RR42_RS10990 87c1b8065d3997847a312b17a0c732ac 145 PANTHER PTHR31793:SF9 1 139 5.2E-31 T 23-04-2016 RR42_RS10990 87c1b8065d3997847a312b17a0c732ac 145 Gene3D G3DSA:3.10.129.10 2 139 1.4E-47 T 23-04-2016 IPR029069 HotDog domain RR42_RS10990 87c1b8065d3997847a312b17a0c732ac 145 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 11 127 3.1E-42 T 23-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RR42_RS10990 87c1b8065d3997847a312b17a0c732ac 145 SUPERFAMILY SSF54637 3 138 1.16E-43 T 23-04-2016 IPR029069 HotDog domain RR42_RS10990 87c1b8065d3997847a312b17a0c732ac 145 PANTHER PTHR31793 1 139 5.2E-31 T 23-04-2016 RR42_RS20320 fac9681721bde8bf55231bde35dca9dd 319 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 12 254 2.1E-36 T 23-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin RR42_RS20320 fac9681721bde8bf55231bde35dca9dd 319 SUPERFAMILY SSF51735 2 314 3.07E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS20320 fac9681721bde8bf55231bde35dca9dd 319 PANTHER PTHR13812 2 309 2.4E-48 T 23-04-2016 RR42_RS20320 fac9681721bde8bf55231bde35dca9dd 319 Gene3D G3DSA:3.30.1780.10 2 140 7.2E-42 T 23-04-2016 IPR023401 Ornithine cyclodeaminase, N-terminal RR42_RS20320 fac9681721bde8bf55231bde35dca9dd 319 PANTHER PTHR13812:SF19 2 309 2.4E-48 T 23-04-2016 RR42_RS20320 fac9681721bde8bf55231bde35dca9dd 319 Gene3D G3DSA:3.40.50.720 141 302 8.1E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS20320 fac9681721bde8bf55231bde35dca9dd 319 PIRSF PIRSF001439 1 316 1.1E-56 T 23-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin RR42_RS03980 e9a1fde131bee6f7d4004082cbfec6ab 453 SUPERFAMILY SSF46689 372 453 1.72E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS03980 e9a1fde131bee6f7d4004082cbfec6ab 453 Pfam PF02954 Bacterial regulatory protein, Fis family 411 451 2.8E-10 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS03980 e9a1fde131bee6f7d4004082cbfec6ab 453 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 434 453 3.4E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS03980 e9a1fde131bee6f7d4004082cbfec6ab 453 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 417 434 3.4E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS03980 e9a1fde131bee6f7d4004082cbfec6ab 453 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 184 197 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RR42_RS03980 e9a1fde131bee6f7d4004082cbfec6ab 453 PANTHER PTHR32071:SF11 2 453 1.9E-232 T 23-04-2016 RR42_RS03980 e9a1fde131bee6f7d4004082cbfec6ab 453 Gene3D G3DSA:3.40.50.300 158 332 9.0E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03980 e9a1fde131bee6f7d4004082cbfec6ab 453 Pfam PF00072 Response regulator receiver domain 21 129 2.3E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS03980 e9a1fde131bee6f7d4004082cbfec6ab 453 Gene3D G3DSA:1.10.10.60 398 453 1.5E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS03980 e9a1fde131bee6f7d4004082cbfec6ab 453 SUPERFAMILY SSF52540 160 389 7.91E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03980 e9a1fde131bee6f7d4004082cbfec6ab 453 PANTHER PTHR32071 2 453 1.9E-232 T 23-04-2016 RR42_RS03980 e9a1fde131bee6f7d4004082cbfec6ab 453 SMART SM00382 180 321 1.3E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS03980 e9a1fde131bee6f7d4004082cbfec6ab 453 Pfam PF00158 Sigma-54 interaction domain 160 326 2.4E-67 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RR42_RS03980 e9a1fde131bee6f7d4004082cbfec6ab 453 SMART SM00448 19 130 7.2E-35 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS03980 e9a1fde131bee6f7d4004082cbfec6ab 453 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 246 261 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RR42_RS03980 e9a1fde131bee6f7d4004082cbfec6ab 453 SUPERFAMILY SSF52172 18 204 1.21E-43 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS03980 e9a1fde131bee6f7d4004082cbfec6ab 453 Gene3D G3DSA:1.10.8.60 333 391 1.0E-21 T 23-04-2016 RR42_RS03980 e9a1fde131bee6f7d4004082cbfec6ab 453 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 373 382 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RR42_RS03980 e9a1fde131bee6f7d4004082cbfec6ab 453 Gene3D G3DSA:3.40.50.2300 18 139 1.2E-35 T 23-04-2016 RR42_RS11750 eb6a7362c7d318b7aa1632d11b282906 487 PANTHER PTHR11911 1 279 9.7E-242 T 23-04-2016 RR42_RS11750 eb6a7362c7d318b7aa1632d11b282906 487 PANTHER PTHR11911 297 484 9.7E-242 T 23-04-2016 RR42_RS11750 eb6a7362c7d318b7aa1632d11b282906 487 SMART SM00116 95 142 4.7E-9 T 23-04-2016 IPR000644 CBS domain RR42_RS11750 eb6a7362c7d318b7aa1632d11b282906 487 SMART SM00116 156 204 2.1E-8 T 23-04-2016 IPR000644 CBS domain RR42_RS11750 eb6a7362c7d318b7aa1632d11b282906 487 Pfam PF00571 CBS domain 94 138 1.8E-8 T 23-04-2016 IPR000644 CBS domain RR42_RS11750 eb6a7362c7d318b7aa1632d11b282906 487 Pfam PF00571 CBS domain 153 203 2.4E-9 T 23-04-2016 IPR000644 CBS domain RR42_RS11750 eb6a7362c7d318b7aa1632d11b282906 487 PANTHER PTHR11911:SF6 1 279 9.7E-242 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RR42_RS11750 eb6a7362c7d318b7aa1632d11b282906 487 PANTHER PTHR11911:SF6 297 484 9.7E-242 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RR42_RS11750 eb6a7362c7d318b7aa1632d11b282906 487 SUPERFAMILY SSF51412 215 477 6.54E-126 T 23-04-2016 RR42_RS11750 eb6a7362c7d318b7aa1632d11b282906 487 SUPERFAMILY SSF51412 2 89 6.54E-126 T 23-04-2016 RR42_RS11750 eb6a7362c7d318b7aa1632d11b282906 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 473 3.1E-163 T 23-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 RR42_RS11750 eb6a7362c7d318b7aa1632d11b282906 487 PIRSF PIRSF000130 1 487 3.4E-203 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RR42_RS11750 eb6a7362c7d318b7aa1632d11b282906 487 SMART SM01240 6 473 0.0 T 23-04-2016 RR42_RS11750 eb6a7362c7d318b7aa1632d11b282906 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 23-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 RR42_RS11750 eb6a7362c7d318b7aa1632d11b282906 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 486 83.933 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RR42_RS11750 eb6a7362c7d318b7aa1632d11b282906 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 455 3.2E-191 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RR42_RS11750 eb6a7362c7d318b7aa1632d11b282906 487 Gene3D G3DSA:3.20.20.70 5 484 1.1E-199 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS11750 eb6a7362c7d318b7aa1632d11b282906 487 SUPERFAMILY SSF54631 94 202 1.22E-27 T 23-04-2016 RR42_RS05320 58e2e109c904f04c4474c0671372ca75 443 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 32 432 7.3E-175 T 23-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 RR42_RS05320 58e2e109c904f04c4474c0671372ca75 443 SUPERFAMILY SSF51556 76 379 5.21E-95 T 23-04-2016 IPR032466 Metal-dependent hydrolase RR42_RS05320 58e2e109c904f04c4474c0671372ca75 443 PANTHER PTHR11271 30 433 5.0E-140 T 23-04-2016 RR42_RS05320 58e2e109c904f04c4474c0671372ca75 443 PANTHER PTHR11271:SF6 30 433 5.0E-140 T 23-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 RR42_RS05320 58e2e109c904f04c4474c0671372ca75 443 Pfam PF01979 Amidohydrolase family 73 433 2.2E-57 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RR42_RS05320 58e2e109c904f04c4474c0671372ca75 443 SUPERFAMILY SSF51338 19 92 7.44E-14 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS05320 58e2e109c904f04c4474c0671372ca75 443 Gene3D G3DSA:2.30.40.10 37 82 3.6E-11 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS05320 58e2e109c904f04c4474c0671372ca75 443 Gene3D G3DSA:3.20.20.140 83 378 5.0E-106 T 23-04-2016 RR42_RS01330 2beebcb094b3bbe632fa81dd7b46050a 593 Pfam PF02954 Bacterial regulatory protein, Fis family 550 585 8.0E-8 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS01330 2beebcb094b3bbe632fa81dd7b46050a 593 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 345 360 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RR42_RS01330 2beebcb094b3bbe632fa81dd7b46050a 593 Gene3D G3DSA:3.40.50.300 257 430 5.5E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01330 2beebcb094b3bbe632fa81dd7b46050a 593 PANTHER PTHR32071 219 589 4.2E-119 T 23-04-2016 RR42_RS01330 2beebcb094b3bbe632fa81dd7b46050a 593 Gene3D G3DSA:1.10.10.60 549 588 2.5E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS01330 2beebcb094b3bbe632fa81dd7b46050a 593 SUPERFAMILY SSF46689 547 589 5.15E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS01330 2beebcb094b3bbe632fa81dd7b46050a 593 SMART SM00382 277 422 7.6E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS01330 2beebcb094b3bbe632fa81dd7b46050a 593 Gene3D G3DSA:1.10.8.60 432 500 2.0E-18 T 23-04-2016 RR42_RS01330 2beebcb094b3bbe632fa81dd7b46050a 593 SUPERFAMILY SSF55785 119 211 3.62E-6 T 23-04-2016 IPR000014 PAS domain RR42_RS01330 2beebcb094b3bbe632fa81dd7b46050a 593 SUPERFAMILY SSF52540 257 500 2.94E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01330 2beebcb094b3bbe632fa81dd7b46050a 593 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 281 294 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RR42_RS01330 2beebcb094b3bbe632fa81dd7b46050a 593 Pfam PF00158 Sigma-54 interaction domain 257 424 9.5E-61 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RR42_RS05770 e9315f9fb613e8afbff29f931117d38b 395 Gene3D G3DSA:3.90.1150.10 284 394 2.2E-15 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS05770 e9315f9fb613e8afbff29f931117d38b 395 Gene3D G3DSA:3.40.640.10 55 283 1.2E-75 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS05770 e9315f9fb613e8afbff29f931117d38b 395 Pfam PF00155 Aminotransferase class I and II 41 392 1.5E-61 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RR42_RS05770 e9315f9fb613e8afbff29f931117d38b 395 PANTHER PTHR11751 21 395 5.5E-133 T 23-04-2016 RR42_RS05770 e9315f9fb613e8afbff29f931117d38b 395 PANTHER PTHR11751:SF301 21 395 5.5E-133 T 23-04-2016 RR42_RS05770 e9315f9fb613e8afbff29f931117d38b 395 SUPERFAMILY SSF53383 20 394 1.9E-102 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS06940 807556b85da0dc1f533dc7449fb33e5a 598 Gene3D G3DSA:3.90.120.10 209 235 1.2E-7 T 23-04-2016 RR42_RS06940 807556b85da0dc1f533dc7449fb33e5a 598 Gene3D G3DSA:3.90.120.10 335 361 1.2E-7 T 23-04-2016 RR42_RS06940 807556b85da0dc1f533dc7449fb33e5a 598 Gene3D G3DSA:3.90.120.10 492 550 1.2E-7 T 23-04-2016 RR42_RS06940 807556b85da0dc1f533dc7449fb33e5a 598 Pfam PF00145 C-5 cytosine-specific DNA methylase 100 211 6.1E-7 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS06940 807556b85da0dc1f533dc7449fb33e5a 598 SUPERFAMILY SSF53335 7 273 4.98E-34 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS06940 807556b85da0dc1f533dc7449fb33e5a 598 SUPERFAMILY SSF53335 499 561 4.98E-34 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS06940 807556b85da0dc1f533dc7449fb33e5a 598 Gene3D G3DSA:3.40.50.150 4 208 9.1E-18 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS19240 e9a64fd8259604d0aed15dade5851d64 276 SUPERFAMILY SSF50249 3 126 9.6E-46 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS19240 e9a64fd8259604d0aed15dade5851d64 276 Gene3D G3DSA:2.40.50.140 1 115 5.3E-46 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS19240 e9a64fd8259604d0aed15dade5851d64 276 PIRSF PIRSF002158 10 276 2.1E-94 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19240 e9a64fd8259604d0aed15dade5851d64 276 PANTHER PTHR13691 1 276 2.4E-133 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19240 e9a64fd8259604d0aed15dade5851d64 276 SMART SM01383 42 119 7.1E-41 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19240 e9a64fd8259604d0aed15dade5851d64 276 SMART SM01382 125 253 6.0E-87 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 RR42_RS19240 e9a64fd8259604d0aed15dade5851d64 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 44.39 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 RR42_RS19240 e9a64fd8259604d0aed15dade5851d64 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 274 1.0E-121 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 RR42_RS19240 e9a64fd8259604d0aed15dade5851d64 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 1.1E-31 T 23-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19240 e9a64fd8259604d0aed15dade5851d64 276 Gene3D G3DSA:2.30.30.30 120 196 6.9E-31 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 RR42_RS19240 e9a64fd8259604d0aed15dade5851d64 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 127 251 6.9E-54 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 RR42_RS19240 e9a64fd8259604d0aed15dade5851d64 276 PANTHER PTHR13691:SF5 1 276 2.4E-133 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 RR42_RS19240 e9a64fd8259604d0aed15dade5851d64 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 23-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 RR42_RS19240 e9a64fd8259604d0aed15dade5851d64 276 SUPERFAMILY SSF50104 128 273 1.38E-58 T 23-04-2016 IPR008991 Translation protein SH3-like domain RR42_RS19240 e9a64fd8259604d0aed15dade5851d64 276 Gene3D G3DSA:4.10.950.10 197 275 2.6E-34 T 23-04-2016 IPR014726 Ribosomal protein L2, domain 3 RR42_RS15330 1a7c15568ff8a964c2d4474522c0f2af 361 Pfam PF01904 Protein of unknown function DUF72 84 352 2.9E-40 T 23-04-2016 IPR002763 Protein of unknown function DUF72 RR42_RS15330 1a7c15568ff8a964c2d4474522c0f2af 361 PANTHER PTHR30348 63 359 7.3E-14 T 23-04-2016 RR42_RS15330 1a7c15568ff8a964c2d4474522c0f2af 361 PANTHER PTHR30348:SF3 63 359 7.3E-14 T 23-04-2016 RR42_RS15330 1a7c15568ff8a964c2d4474522c0f2af 361 Gene3D G3DSA:3.20.20.410 54 354 6.3E-62 T 23-04-2016 IPR002763 Protein of unknown function DUF72 RR42_RS15330 1a7c15568ff8a964c2d4474522c0f2af 361 SUPERFAMILY SSF117396 63 354 9.55E-47 T 23-04-2016 IPR002763 Protein of unknown function DUF72 RR42_RS17415 c302b6a80de7ba472884d3880d111717 323 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 288 5.5E-75 T 23-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 RR42_RS17415 c302b6a80de7ba472884d3880d111717 323 Pfam PF07549 SecD/SecF GG Motif 32 59 7.6E-9 T 23-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RR42_RS17415 c302b6a80de7ba472884d3880d111717 323 PANTHER PTHR30081 7 321 6.2E-75 T 23-04-2016 RR42_RS17415 c302b6a80de7ba472884d3880d111717 323 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 103 285 6.1E-52 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RR42_RS17415 c302b6a80de7ba472884d3880d111717 323 SUPERFAMILY SSF82866 73 299 4.71E-40 T 23-04-2016 RR42_RS17415 c302b6a80de7ba472884d3880d111717 323 Gene3D G3DSA:1.20.1640.10 99 304 2.6E-29 T 23-04-2016 RR42_RS17415 c302b6a80de7ba472884d3880d111717 323 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 4.3E-27 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RR42_RS17415 c302b6a80de7ba472884d3880d111717 323 PRINTS PR01755 Bacterial translocase SecF protein signature 204 222 4.3E-27 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RR42_RS17415 c302b6a80de7ba472884d3880d111717 323 PRINTS PR01755 Bacterial translocase SecF protein signature 236 251 4.3E-27 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RR42_RS17415 c302b6a80de7ba472884d3880d111717 323 PRINTS PR01755 Bacterial translocase SecF protein signature 156 170 4.3E-27 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RR42_RS17415 c302b6a80de7ba472884d3880d111717 323 Pfam PF02355 Protein export membrane protein 112 296 4.2E-65 T 23-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RR42_RS17415 c302b6a80de7ba472884d3880d111717 323 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 299 29.176 T 23-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 RR42_RS02605 8ba0f3c83ccbf98cf121a549435d0257 439 Pfam PF13660 Domain of unknown function (DUF4147) 13 237 8.3E-74 T 23-04-2016 IPR025286 MOFRL-associated domain RR42_RS02605 8ba0f3c83ccbf98cf121a549435d0257 439 SUPERFAMILY SSF82544 7 438 2.62E-134 T 23-04-2016 RR42_RS02605 8ba0f3c83ccbf98cf121a549435d0257 439 Gene3D G3DSA:3.40.1480.10 254 438 1.3E-65 T 23-04-2016 IPR007835 MOFRL domain RR42_RS02605 8ba0f3c83ccbf98cf121a549435d0257 439 PANTHER PTHR12227 9 438 6.5E-115 T 23-04-2016 RR42_RS02605 8ba0f3c83ccbf98cf121a549435d0257 439 Gene3D G3DSA:3.40.50.10180 12 253 6.4E-93 T 23-04-2016 RR42_RS02605 8ba0f3c83ccbf98cf121a549435d0257 439 PANTHER PTHR12227:SF0 9 438 6.5E-115 T 23-04-2016 RR42_RS02605 8ba0f3c83ccbf98cf121a549435d0257 439 Pfam PF05161 MOFRL family 320 432 1.9E-32 T 23-04-2016 IPR007835 MOFRL domain RR42_RS04705 4e3f9c8a62a42d207cb57b67af27c405 216 Pfam PF02545 Maf-like protein 21 211 3.4E-52 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 RR42_RS04705 4e3f9c8a62a42d207cb57b67af27c405 216 Hamap MF_00528 Septum formation protein Maf [maf]. 20 216 31.499 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 RR42_RS04705 4e3f9c8a62a42d207cb57b67af27c405 216 Gene3D G3DSA:3.90.950.10 20 213 2.0E-65 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RR42_RS04705 4e3f9c8a62a42d207cb57b67af27c405 216 SUPERFAMILY SSF52972 18 211 5.1E-56 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RR42_RS04705 4e3f9c8a62a42d207cb57b67af27c405 216 PANTHER PTHR11746 153 210 6.7E-12 T 23-04-2016 RR42_RS04705 4e3f9c8a62a42d207cb57b67af27c405 216 TIGRFAM TIGR00172 maf: septum formation protein Maf 21 210 4.6E-47 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 RR42_RS04705 4e3f9c8a62a42d207cb57b67af27c405 216 PIRSF PIRSF006305 17 215 4.0E-49 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 RR42_RS19110 0f65faca34009d2382cff88e976e6780 647 SUPERFAMILY SSF52833 539 637 7.77E-20 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS19110 0f65faca34009d2382cff88e976e6780 647 Pfam PF13899 Thioredoxin-like 533 594 5.0E-15 T 23-04-2016 RR42_RS19110 0f65faca34009d2382cff88e976e6780 647 PANTHER PTHR32234 195 645 4.0E-156 T 23-04-2016 RR42_RS19110 0f65faca34009d2382cff88e976e6780 647 PANTHER PTHR32234 49 165 4.0E-156 T 23-04-2016 RR42_RS19110 0f65faca34009d2382cff88e976e6780 647 PANTHER PTHR32234:SF0 195 645 4.0E-156 T 23-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 RR42_RS19110 0f65faca34009d2382cff88e976e6780 647 PANTHER PTHR32234:SF0 49 165 4.0E-156 T 23-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 RR42_RS19110 0f65faca34009d2382cff88e976e6780 647 ProSitePatterns PS00194 Thioredoxin family active site. 550 568 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RR42_RS19110 0f65faca34009d2382cff88e976e6780 647 SUPERFAMILY SSF74863 46 164 6.02E-35 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RR42_RS19110 0f65faca34009d2382cff88e976e6780 647 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 230 428 4.0E-20 T 23-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 RR42_RS19110 0f65faca34009d2382cff88e976e6780 647 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 24 641 35.901 T 23-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 RR42_RS19110 0f65faca34009d2382cff88e976e6780 647 Pfam PF11412 Disulphide bond corrector protein DsbC 48 164 7.2E-34 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RR42_RS19110 0f65faca34009d2382cff88e976e6780 647 Gene3D G3DSA:2.60.40.1250 44 166 2.9E-40 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RR42_RS19110 0f65faca34009d2382cff88e976e6780 647 Gene3D G3DSA:3.40.30.10 529 642 3.5E-34 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS06310 4968c08694242f281907e990339f186c 273 Gene3D G3DSA:3.40.190.80 155 263 2.8E-36 T 23-04-2016 RR42_RS06310 4968c08694242f281907e990339f186c 273 PANTHER PTHR20854:SF4 1 271 5.7E-104 T 23-04-2016 RR42_RS06310 4968c08694242f281907e990339f186c 273 PRINTS PR01959 SuhB family inositol monophosphatase signature 202 214 6.9E-29 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RR42_RS06310 4968c08694242f281907e990339f186c 273 PRINTS PR01959 SuhB family inositol monophosphatase signature 160 186 6.9E-29 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RR42_RS06310 4968c08694242f281907e990339f186c 273 PRINTS PR01959 SuhB family inositol monophosphatase signature 108 127 6.9E-29 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RR42_RS06310 4968c08694242f281907e990339f186c 273 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 6.9E-29 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RR42_RS06310 4968c08694242f281907e990339f186c 273 Gene3D G3DSA:3.30.540.10 2 154 1.2E-58 T 23-04-2016 RR42_RS06310 4968c08694242f281907e990339f186c 273 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 85 98 - T 23-04-2016 IPR020583 Inositol monophosphatase, metal-binding site RR42_RS06310 4968c08694242f281907e990339f186c 273 PANTHER PTHR20854 1 271 5.7E-104 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RR42_RS06310 4968c08694242f281907e990339f186c 273 Pfam PF00459 Inositol monophosphatase family 2 256 9.1E-70 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RR42_RS06310 4968c08694242f281907e990339f186c 273 SUPERFAMILY SSF56655 1 264 5.5E-87 T 23-04-2016 RR42_RS06310 4968c08694242f281907e990339f186c 273 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 215 229 - T 23-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 RR42_RS06310 4968c08694242f281907e990339f186c 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 6.0E-62 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RR42_RS06310 4968c08694242f281907e990339f186c 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 181 202 6.0E-62 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RR42_RS06310 4968c08694242f281907e990339f186c 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 6.0E-62 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RR42_RS06310 4968c08694242f281907e990339f186c 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 134 157 6.0E-62 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RR42_RS06310 4968c08694242f281907e990339f186c 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 212 236 6.0E-62 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RR42_RS06310 4968c08694242f281907e990339f186c 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 85 101 6.0E-62 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RR42_RS16570 923df4fa194abb1c5b4d0e5438ca0131 383 PANTHER PTHR32332 22 97 1.3E-59 T 23-04-2016 RR42_RS16570 923df4fa194abb1c5b4d0e5438ca0131 383 PANTHER PTHR32332 139 381 1.3E-59 T 23-04-2016 RR42_RS16570 923df4fa194abb1c5b4d0e5438ca0131 383 Gene3D G3DSA:3.20.20.70 22 363 2.0E-50 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS16570 923df4fa194abb1c5b4d0e5438ca0131 383 SUPERFAMILY SSF51412 132 375 1.98E-46 T 23-04-2016 RR42_RS16570 923df4fa194abb1c5b4d0e5438ca0131 383 SUPERFAMILY SSF51412 20 92 1.98E-46 T 23-04-2016 RR42_RS16570 923df4fa194abb1c5b4d0e5438ca0131 383 Pfam PF03060 Nitronate monooxygenase 42 368 2.5E-51 T 23-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 RR42_RS16040 7d5f6f7991398fc320696c03130610ea 618 PANTHER PTHR12815 21 265 1.5E-68 T 23-04-2016 RR42_RS16040 7d5f6f7991398fc320696c03130610ea 618 PANTHER PTHR12815 288 607 1.5E-68 T 23-04-2016 RR42_RS16040 7d5f6f7991398fc320696c03130610ea 618 Pfam PF01103 Surface antigen 383 606 1.2E-28 T 23-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 RR42_RS16040 7d5f6f7991398fc320696c03130610ea 618 PANTHER PTHR12815:SF12 21 265 1.5E-68 T 23-04-2016 RR42_RS16040 7d5f6f7991398fc320696c03130610ea 618 PANTHER PTHR12815:SF12 288 607 1.5E-68 T 23-04-2016 RR42_RS16040 7d5f6f7991398fc320696c03130610ea 618 Gene3D G3DSA:2.40.160.50 368 607 8.4E-10 T 23-04-2016 RR42_RS09950 7d7720c080fb55e0503fcd96f60b2ee6 134 Gene3D G3DSA:2.60.120.10 34 120 2.4E-20 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS09950 7d7720c080fb55e0503fcd96f60b2ee6 134 PANTHER PTHR38599:SF1 17 133 5.5E-22 T 23-04-2016 RR42_RS09950 7d7720c080fb55e0503fcd96f60b2ee6 134 PANTHER PTHR38599 17 133 5.5E-22 T 23-04-2016 RR42_RS09950 7d7720c080fb55e0503fcd96f60b2ee6 134 Pfam PF07883 Cupin domain 50 119 1.6E-14 T 23-04-2016 IPR013096 Cupin 2, conserved barrel RR42_RS09950 7d7720c080fb55e0503fcd96f60b2ee6 134 SUPERFAMILY SSF51182 26 124 2.22E-22 T 23-04-2016 IPR011051 RmlC-like cupin domain RR42_RS13525 9e20f153ad19113e1c4621a5fa182b73 136 PANTHER PTHR11803 1 133 6.8E-53 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family RR42_RS13525 9e20f153ad19113e1c4621a5fa182b73 136 SUPERFAMILY SSF55298 4 133 1.26E-28 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RR42_RS13525 9e20f153ad19113e1c4621a5fa182b73 136 Pfam PF01042 Endoribonuclease L-PSP 27 132 4.9E-20 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family RR42_RS13525 9e20f153ad19113e1c4621a5fa182b73 136 PANTHER PTHR11803:SF16 1 133 6.8E-53 T 23-04-2016 RR42_RS13525 9e20f153ad19113e1c4621a5fa182b73 136 Gene3D G3DSA:3.30.1330.40 5 134 2.6E-33 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RR42_RS05400 daf341dfc3af232a103de889d7e91f8e 388 Pfam PF13692 Glycosyl transferases group 1 180 297 1.2E-15 T 23-04-2016 RR42_RS05400 daf341dfc3af232a103de889d7e91f8e 388 SUPERFAMILY SSF53756 1 329 8.52E-63 T 23-04-2016 RR42_RS05400 daf341dfc3af232a103de889d7e91f8e 388 PANTHER PTHR12526:SF363 1 370 2.2E-75 T 23-04-2016 RR42_RS05400 daf341dfc3af232a103de889d7e91f8e 388 PANTHER PTHR12526 1 370 2.2E-75 T 23-04-2016 RR42_RS05400 daf341dfc3af232a103de889d7e91f8e 388 Pfam PF13439 Glycosyltransferase Family 4 14 165 8.2E-19 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RR42_RS05400 daf341dfc3af232a103de889d7e91f8e 388 Gene3D G3DSA:3.40.50.2000 175 316 2.7E-15 T 23-04-2016 RR42_RS01235 9f138875bfe09d66b102f256875d0d87 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RR42_RS01235 9f138875bfe09d66b102f256875d0d87 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 7.5E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS01235 9f138875bfe09d66b102f256875d0d87 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 7.5E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS01235 9f138875bfe09d66b102f256875d0d87 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 7.5E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS01235 9f138875bfe09d66b102f256875d0d87 260 PANTHER PTHR24322 155 187 8.8E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS01235 9f138875bfe09d66b102f256875d0d87 260 PANTHER PTHR24322 10 139 8.8E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS01235 9f138875bfe09d66b102f256875d0d87 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.8E-29 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS01235 9f138875bfe09d66b102f256875d0d87 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.8E-29 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS01235 9f138875bfe09d66b102f256875d0d87 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.8E-29 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS01235 9f138875bfe09d66b102f256875d0d87 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 1.8E-29 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS01235 9f138875bfe09d66b102f256875d0d87 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.8E-29 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS01235 9f138875bfe09d66b102f256875d0d87 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.8E-29 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS01235 9f138875bfe09d66b102f256875d0d87 260 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 6 260 8.9E-101 T 23-04-2016 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 RR42_RS01235 9f138875bfe09d66b102f256875d0d87 260 SUPERFAMILY SSF51735 4 259 7.8E-74 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS01235 9f138875bfe09d66b102f256875d0d87 260 Gene3D G3DSA:3.40.50.720 1 259 4.7E-77 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS01235 9f138875bfe09d66b102f256875d0d87 260 Pfam PF00106 short chain dehydrogenase 6 197 8.0E-54 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS19680 90313deb017363865fb3eaa445deba19 151 Gene3D G3DSA:3.40.1260.10 36 151 2.3E-33 T 23-04-2016 IPR027396 DsrEFH-like RR42_RS19680 90313deb017363865fb3eaa445deba19 151 Pfam PF02635 DsrE/DsrF-like family 51 151 1.0E-12 T 23-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein RR42_RS19680 90313deb017363865fb3eaa445deba19 151 SUPERFAMILY SSF75169 37 151 3.87E-22 T 23-04-2016 IPR027396 DsrEFH-like RR42_RS19680 90313deb017363865fb3eaa445deba19 151 PANTHER PTHR37691 1 151 7.8E-19 T 23-04-2016 RR42_RS19680 90313deb017363865fb3eaa445deba19 151 PANTHER PTHR37691:SF1 1 151 7.8E-19 T 23-04-2016 RR42_RS33285 63af3c1aeeb79b1379849f622a1b0588 153 Gene3D G3DSA:3.90.1720.10 26 151 4.0E-45 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RR42_RS33285 63af3c1aeeb79b1379849f622a1b0588 153 Pfam PF00877 NlpC/P60 family 42 149 2.0E-30 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RR42_RS33285 63af3c1aeeb79b1379849f622a1b0588 153 SUPERFAMILY SSF54001 25 150 4.25E-42 T 23-04-2016 RR42_RS33285 63af3c1aeeb79b1379849f622a1b0588 153 PANTHER PTHR21666 31 152 2.1E-36 T 23-04-2016 RR42_RS16300 53beffc844036c81a66ff72a17d89619 415 Pfam PF00691 OmpA family 310 407 3.0E-16 T 23-04-2016 IPR006665 OmpA-like domain RR42_RS16300 53beffc844036c81a66ff72a17d89619 415 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 46 250 1.9E-57 T 23-04-2016 IPR017732 Type IV / VI secretion system, DotU RR42_RS16300 53beffc844036c81a66ff72a17d89619 415 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 278 413 7.0E-46 T 23-04-2016 IPR017733 Type VI secretion system peptidoglycan-associated domain RR42_RS16300 53beffc844036c81a66ff72a17d89619 415 Pfam PF09850 Type VI secretion system protein DotU 47 247 1.4E-54 T 23-04-2016 IPR017732 Type IV / VI secretion system, DotU RR42_RS16300 53beffc844036c81a66ff72a17d89619 415 Gene3D G3DSA:3.30.1330.60 288 413 7.2E-29 T 23-04-2016 IPR006665 OmpA-like domain RR42_RS16300 53beffc844036c81a66ff72a17d89619 415 PANTHER PTHR30329:SF7 105 183 6.5E-54 T 23-04-2016 RR42_RS16300 53beffc844036c81a66ff72a17d89619 415 PANTHER PTHR30329:SF7 226 413 6.5E-54 T 23-04-2016 RR42_RS16300 53beffc844036c81a66ff72a17d89619 415 PANTHER PTHR30329 105 183 6.5E-54 T 23-04-2016 RR42_RS16300 53beffc844036c81a66ff72a17d89619 415 PANTHER PTHR30329 226 413 6.5E-54 T 23-04-2016 RR42_RS16300 53beffc844036c81a66ff72a17d89619 415 SUPERFAMILY SSF103088 286 413 5.76E-28 T 23-04-2016 IPR006665 OmpA-like domain RR42_RS19940 688fcfeb022e2bab1e2aae49ae8d4773 292 Hamap MF_00188 Protease HtpX [htpX]. 1 291 25.137 T 23-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 RR42_RS19940 688fcfeb022e2bab1e2aae49ae8d4773 292 PANTHER PTHR10120:SF19 1 292 3.0E-93 T 23-04-2016 RR42_RS19940 688fcfeb022e2bab1e2aae49ae8d4773 292 PANTHER PTHR10120 1 292 3.0E-93 T 23-04-2016 RR42_RS19940 688fcfeb022e2bab1e2aae49ae8d4773 292 Gene3D G3DSA:3.30.2010.10 79 161 3.0E-29 T 23-04-2016 RR42_RS19940 688fcfeb022e2bab1e2aae49ae8d4773 292 Pfam PF01435 Peptidase family M48 81 290 4.8E-38 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RR42_RS03960 fb0b87fce8dd583a0c5578d805fd497f 358 SUPERFAMILY SSF51735 5 342 3.82E-93 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS03960 fb0b87fce8dd583a0c5578d805fd497f 358 Gene3D G3DSA:3.30.1780.10 6 143 1.3E-35 T 23-04-2016 IPR023401 Ornithine cyclodeaminase, N-terminal RR42_RS03960 fb0b87fce8dd583a0c5578d805fd497f 358 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 20 317 5.6E-100 T 23-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin RR42_RS03960 fb0b87fce8dd583a0c5578d805fd497f 358 PANTHER PTHR13812 58 330 7.0E-51 T 23-04-2016 RR42_RS03960 fb0b87fce8dd583a0c5578d805fd497f 358 PIRSF PIRSF001439 1 328 5.6E-54 T 23-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin RR42_RS03960 fb0b87fce8dd583a0c5578d805fd497f 358 PANTHER PTHR13812:SF19 58 330 7.0E-51 T 23-04-2016 RR42_RS03960 fb0b87fce8dd583a0c5578d805fd497f 358 Gene3D G3DSA:3.40.50.720 144 300 5.6E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS06330 3847a95d7d82c01f73debe5fb12ac5aa 262 SUPERFAMILY SSF56300 168 255 2.81E-28 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS06330 3847a95d7d82c01f73debe5fb12ac5aa 262 SUPERFAMILY SSF56300 20 140 2.81E-28 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS06330 3847a95d7d82c01f73debe5fb12ac5aa 262 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 20 240 2.6E-76 T 23-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 RR42_RS06330 3847a95d7d82c01f73debe5fb12ac5aa 262 PANTHER PTHR34990:SF1 21 237 9.9E-79 T 23-04-2016 RR42_RS06330 3847a95d7d82c01f73debe5fb12ac5aa 262 Gene3D G3DSA:3.60.21.10 194 244 1.5E-20 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS06330 3847a95d7d82c01f73debe5fb12ac5aa 262 Gene3D G3DSA:3.60.21.10 20 142 1.5E-20 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS06330 3847a95d7d82c01f73debe5fb12ac5aa 262 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 262 105.269 T 23-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 RR42_RS06330 3847a95d7d82c01f73debe5fb12ac5aa 262 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 21 224 2.2E-9 T 23-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type RR42_RS06330 3847a95d7d82c01f73debe5fb12ac5aa 262 PANTHER PTHR34990 21 237 9.9E-79 T 23-04-2016 RR42_RS09385 d50c73cba527cc8cf4c95707cf4601c7 315 Gene3D G3DSA:1.20.120.520 132 285 5.5E-11 T 23-04-2016 RR42_RS09385 d50c73cba527cc8cf4c95707cf4601c7 315 Pfam PF00582 Universal stress protein family 1 121 3.8E-8 T 23-04-2016 IPR006016 UspA GO:0006950 RR42_RS09385 d50c73cba527cc8cf4c95707cf4601c7 315 SUPERFAMILY SSF52402 1 123 9.42E-14 T 23-04-2016 RR42_RS09385 d50c73cba527cc8cf4c95707cf4601c7 315 Gene3D G3DSA:3.40.50.620 1 122 9.7E-14 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS05085 d22fedccdf1b273a87ec8d8c8a1f6f87 140 PANTHER PTHR11803 18 134 1.1E-48 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family RR42_RS05085 d22fedccdf1b273a87ec8d8c8a1f6f87 140 SUPERFAMILY SSF55298 8 137 4.71E-32 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RR42_RS05085 d22fedccdf1b273a87ec8d8c8a1f6f87 140 Gene3D G3DSA:3.30.1330.40 10 137 1.8E-36 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RR42_RS05085 d22fedccdf1b273a87ec8d8c8a1f6f87 140 Pfam PF01042 Endoribonuclease L-PSP 13 135 1.4E-26 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family RR42_RS05085 d22fedccdf1b273a87ec8d8c8a1f6f87 140 PANTHER PTHR11803:SF1 18 134 1.1E-48 T 23-04-2016 RR42_RS04270 38ff558fddd6fd36f1eaf990c6cbdd45 434 Gene3D G3DSA:1.20.1250.20 20 223 3.0E-44 T 23-04-2016 RR42_RS04270 38ff558fddd6fd36f1eaf990c6cbdd45 434 Pfam PF07690 Major Facilitator Superfamily 31 393 1.1E-45 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS04270 38ff558fddd6fd36f1eaf990c6cbdd45 434 Gene3D G3DSA:1.20.1250.20 240 425 1.6E-21 T 23-04-2016 RR42_RS04270 38ff558fddd6fd36f1eaf990c6cbdd45 434 PANTHER PTHR11662:SF3 16 425 1.1E-157 T 23-04-2016 RR42_RS04270 38ff558fddd6fd36f1eaf990c6cbdd45 434 SUPERFAMILY SSF103473 10 428 1.44E-85 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS04270 38ff558fddd6fd36f1eaf990c6cbdd45 434 PANTHER PTHR11662 16 425 1.1E-157 T 23-04-2016 RR42_RS09360 2bd18a0cfc1160401676cbcb3e1c9ad8 204 Gene3D G3DSA:3.40.50.1820 7 189 5.2E-38 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS09360 2bd18a0cfc1160401676cbcb3e1c9ad8 204 SUPERFAMILY SSF53474 7 182 2.77E-29 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS09360 2bd18a0cfc1160401676cbcb3e1c9ad8 204 Pfam PF06821 Serine hydrolase 9 186 1.3E-40 T 23-04-2016 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- RR42_RS13690 e7830d0f9bdae21f7cdf36cc2d5d15d1 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 2.0E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13690 e7830d0f9bdae21f7cdf36cc2d5d15d1 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 2.0E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13690 e7830d0f9bdae21f7cdf36cc2d5d15d1 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 2.0E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13690 e7830d0f9bdae21f7cdf36cc2d5d15d1 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 2.0E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13690 e7830d0f9bdae21f7cdf36cc2d5d15d1 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 2.0E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13690 e7830d0f9bdae21f7cdf36cc2d5d15d1 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 2.0E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13690 e7830d0f9bdae21f7cdf36cc2d5d15d1 256 PANTHER PTHR24322 163 194 1.4E-49 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13690 e7830d0f9bdae21f7cdf36cc2d5d15d1 256 PANTHER PTHR24322 17 147 1.4E-49 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13690 e7830d0f9bdae21f7cdf36cc2d5d15d1 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RR42_RS13690 e7830d0f9bdae21f7cdf36cc2d5d15d1 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 253 9.5E-56 T 23-04-2016 RR42_RS13690 e7830d0f9bdae21f7cdf36cc2d5d15d1 256 SUPERFAMILY SSF51735 12 255 4.45E-70 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS13690 e7830d0f9bdae21f7cdf36cc2d5d15d1 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 2.4E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13690 e7830d0f9bdae21f7cdf36cc2d5d15d1 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 2.4E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13690 e7830d0f9bdae21f7cdf36cc2d5d15d1 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 2.4E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13690 e7830d0f9bdae21f7cdf36cc2d5d15d1 256 Gene3D G3DSA:3.40.50.720 8 255 4.6E-72 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS27360 5fe51db080865677b0e437f6eb86a6e3 332 Gene3D G3DSA:3.40.50.150 6 128 3.8E-12 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS27360 5fe51db080865677b0e437f6eb86a6e3 332 SUPERFAMILY SSF53335 6 221 3.43E-18 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS27360 5fe51db080865677b0e437f6eb86a6e3 332 Pfam PF00145 C-5 cytosine-specific DNA methylase 44 117 5.7E-7 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS13715 313a03d55cbf4d81ec588b8da796d7d5 326 PIRSF PIRSF017082 1 326 5.4E-69 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS13715 313a03d55cbf4d81ec588b8da796d7d5 326 PANTHER PTHR30349 1 288 8.4E-64 T 23-04-2016 RR42_RS13715 313a03d55cbf4d81ec588b8da796d7d5 326 SUPERFAMILY SSF53850 111 280 4.51E-10 T 23-04-2016 RR42_RS13715 313a03d55cbf4d81ec588b8da796d7d5 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 322 2.2E-66 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS13715 313a03d55cbf4d81ec588b8da796d7d5 326 PANTHER PTHR30349:SF1 1 288 8.4E-64 T 23-04-2016 RR42_RS12205 c0e2b27b1676e077ecdd3f4d6a3a9118 320 Gene3D G3DSA:3.40.50.1820 14 295 3.2E-54 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS12205 c0e2b27b1676e077ecdd3f4d6a3a9118 320 PANTHER PTHR10992 17 124 1.1E-29 T 23-04-2016 RR42_RS12205 c0e2b27b1676e077ecdd3f4d6a3a9118 320 PANTHER PTHR10992 141 298 1.1E-29 T 23-04-2016 RR42_RS12205 c0e2b27b1676e077ecdd3f4d6a3a9118 320 SUPERFAMILY SSF53474 13 294 5.07E-44 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS12205 c0e2b27b1676e077ecdd3f4d6a3a9118 320 PANTHER PTHR10992:SF842 17 124 1.1E-29 T 23-04-2016 RR42_RS12205 c0e2b27b1676e077ecdd3f4d6a3a9118 320 PANTHER PTHR10992:SF842 141 298 1.1E-29 T 23-04-2016 RR42_RS12205 c0e2b27b1676e077ecdd3f4d6a3a9118 320 Pfam PF00561 alpha/beta hydrolase fold 36 143 6.0E-17 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS07315 0c0bc03684c245c01c7751169c03245f 604 Pfam PF01740 STAS domain 464 566 3.1E-11 T 23-04-2016 IPR002645 STAS domain RR42_RS07315 0c0bc03684c245c01c7751169c03245f 604 SUPERFAMILY SSF52091 458 569 9.42E-12 T 23-04-2016 IPR002645 STAS domain RR42_RS07315 0c0bc03684c245c01c7751169c03245f 604 Gene3D G3DSA:3.30.750.24 461 569 1.1E-10 T 23-04-2016 IPR002645 STAS domain RR42_RS07315 0c0bc03684c245c01c7751169c03245f 604 PANTHER PTHR11814 13 594 4.0E-135 T 23-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 RR42_RS07315 0c0bc03684c245c01c7751169c03245f 604 Pfam PF00916 Sulfate permease family 30 402 3.9E-84 T 23-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 RR42_RS07315 0c0bc03684c245c01c7751169c03245f 604 PANTHER PTHR11814:SF71 13 594 4.0E-135 T 23-04-2016 RR42_RS20185 9abe1722c84275b40ca725970f58700c 88 SUPERFAMILY SSF81333 7 82 1.44E-18 T 23-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 RR42_RS20185 9abe1722c84275b40ca725970f58700c 88 Hamap MF_01396 ATP synthase subunit c [atpH]. 12 80 13.863 T 23-04-2016 RR42_RS20185 9abe1722c84275b40ca725970f58700c 88 Pfam PF00137 ATP synthase subunit C 14 76 3.4E-10 T 23-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 RR42_RS20185 9abe1722c84275b40ca725970f58700c 88 ProSitePatterns PS00605 ATP synthase c subunit signature. 43 64 - T 23-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site RR42_RS20185 9abe1722c84275b40ca725970f58700c 88 Gene3D G3DSA:1.20.20.10 7 82 1.2E-34 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 RR42_RS20185 9abe1722c84275b40ca725970f58700c 88 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 24 80 1.8E-20 T 23-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RR42_RS06340 12110ad4994486f5df4b92062b281d0f 194 SUPERFAMILY SSF50891 30 193 4.38E-57 T 23-04-2016 IPR029000 Cyclophilin-like domain RR42_RS06340 12110ad4994486f5df4b92062b281d0f 194 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 34 191 9.5E-48 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RR42_RS06340 12110ad4994486f5df4b92062b281d0f 194 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 68 85 - T 23-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 RR42_RS06340 12110ad4994486f5df4b92062b281d0f 194 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 148 163 6.6E-14 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RR42_RS06340 12110ad4994486f5df4b92062b281d0f 194 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 73 85 6.6E-14 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RR42_RS06340 12110ad4994486f5df4b92062b281d0f 194 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 47 62 6.6E-14 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RR42_RS06340 12110ad4994486f5df4b92062b281d0f 194 Gene3D G3DSA:2.40.100.10 30 193 3.9E-54 T 23-04-2016 IPR029000 Cyclophilin-like domain RR42_RS06340 12110ad4994486f5df4b92062b281d0f 194 PANTHER PTHR11071:SF192 35 193 1.4E-57 T 23-04-2016 RR42_RS06340 12110ad4994486f5df4b92062b281d0f 194 PANTHER PTHR11071 35 193 1.4E-57 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 RR42_RS09965 b2ed973f37a8714c8a1813bd8171a4a3 510 Gene3D G3DSA:3.90.1150.10 382 479 2.7E-4 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS09965 b2ed973f37a8714c8a1813bd8171a4a3 510 PANTHER PTHR11751 119 508 7.8E-103 T 23-04-2016 RR42_RS09965 b2ed973f37a8714c8a1813bd8171a4a3 510 SUPERFAMILY SSF53383 141 509 1.05E-83 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS09965 b2ed973f37a8714c8a1813bd8171a4a3 510 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 83 1.8E-12 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS09965 b2ed973f37a8714c8a1813bd8171a4a3 510 Pfam PF00155 Aminotransferase class I and II 173 481 1.1E-23 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RR42_RS09965 b2ed973f37a8714c8a1813bd8171a4a3 510 Gene3D G3DSA:1.10.10.10 10 84 5.6E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS09965 b2ed973f37a8714c8a1813bd8171a4a3 510 PANTHER PTHR11751:SF10 119 508 7.8E-103 T 23-04-2016 RR42_RS09965 b2ed973f37a8714c8a1813bd8171a4a3 510 Gene3D G3DSA:3.40.640.10 173 381 8.6E-58 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS09965 b2ed973f37a8714c8a1813bd8171a4a3 510 SMART SM00345 24 83 2.5E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS09965 b2ed973f37a8714c8a1813bd8171a4a3 510 SUPERFAMILY SSF46785 13 85 2.64E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS15670 f9ee8feeec5c7763c00add8c653ff31c 495 PANTHER PTHR30026 11 462 1.9E-101 T 23-04-2016 RR42_RS15670 f9ee8feeec5c7763c00add8c653ff31c 495 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 35 450 1.6E-102 T 23-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 RR42_RS15670 f9ee8feeec5c7763c00add8c653ff31c 495 Gene3D G3DSA:1.20.1600.10 31 443 7.5E-77 T 23-04-2016 RR42_RS15670 f9ee8feeec5c7763c00add8c653ff31c 495 Pfam PF02321 Outer membrane efflux protein 248 436 2.0E-28 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RR42_RS15670 f9ee8feeec5c7763c00add8c653ff31c 495 Pfam PF02321 Outer membrane efflux protein 36 223 2.3E-21 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RR42_RS15670 f9ee8feeec5c7763c00add8c653ff31c 495 PANTHER PTHR30026:SF3 11 462 1.9E-101 T 23-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 RR42_RS15670 f9ee8feeec5c7763c00add8c653ff31c 495 SUPERFAMILY SSF56954 35 450 3.66E-91 T 23-04-2016 RR42_RS02655 d11e0656dd25b70b5411f442a551ceb8 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 7.3E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS02655 d11e0656dd25b70b5411f442a551ceb8 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 7.3E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS02655 d11e0656dd25b70b5411f442a551ceb8 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 7.3E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS02655 d11e0656dd25b70b5411f442a551ceb8 304 Gene3D G3DSA:3.40.190.10 94 184 4.6E-18 T 23-04-2016 RR42_RS02655 d11e0656dd25b70b5411f442a551ceb8 304 Pfam PF03466 LysR substrate binding domain 93 296 1.1E-35 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS02655 d11e0656dd25b70b5411f442a551ceb8 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 66 2.2E-22 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS02655 d11e0656dd25b70b5411f442a551ceb8 304 SUPERFAMILY SSF46785 4 117 2.35E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS02655 d11e0656dd25b70b5411f442a551ceb8 304 Gene3D G3DSA:1.10.10.10 4 80 4.8E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS02655 d11e0656dd25b70b5411f442a551ceb8 304 PANTHER PTHR30346 2 298 2.3E-55 T 23-04-2016 RR42_RS02655 d11e0656dd25b70b5411f442a551ceb8 304 SUPERFAMILY SSF53850 94 298 2.06E-34 T 23-04-2016 RR42_RS02655 d11e0656dd25b70b5411f442a551ceb8 304 Gene3D G3DSA:3.40.190.10 185 271 1.6E-29 T 23-04-2016 RR42_RS07510 9896721f4ff9c6a9293e754a765c174d 566 SUPERFAMILY SSF52096 29 250 4.75E-33 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS07510 9896721f4ff9c6a9293e754a765c174d 566 Gene3D G3DSA:3.90.226.10 20 244 1.2E-35 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS07510 9896721f4ff9c6a9293e754a765c174d 566 Gene3D G3DSA:3.90.226.10 317 499 5.7E-4 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS07510 9896721f4ff9c6a9293e754a765c174d 566 TIGRFAM TIGR03222 benzo_boxC: benzoyl-CoA-dihydrodiol lyase 21 566 6.2E-303 T 23-04-2016 IPR017633 Benzoyl-CoA-dihydrodiol lyase MetaCyc: PWY-1361 RR42_RS07510 9896721f4ff9c6a9293e754a765c174d 566 PANTHER PTHR11941 18 232 2.3E-29 T 23-04-2016 RR42_RS07510 9896721f4ff9c6a9293e754a765c174d 566 PANTHER PTHR11941 486 507 2.3E-29 T 23-04-2016 RR42_RS07510 9896721f4ff9c6a9293e754a765c174d 566 PANTHER PTHR11941:SF54 18 232 2.3E-29 T 23-04-2016 RR42_RS07510 9896721f4ff9c6a9293e754a765c174d 566 PANTHER PTHR11941:SF54 486 507 2.3E-29 T 23-04-2016 RR42_RS07510 9896721f4ff9c6a9293e754a765c174d 566 SUPERFAMILY SSF52096 313 561 4.04E-11 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS07510 9896721f4ff9c6a9293e754a765c174d 566 Pfam PF00378 Enoyl-CoA hydratase/isomerase 62 250 1.2E-21 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RR42_RS11550 b7b1f171e8f2c4d0fe440ac0c7d8e31d 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.0E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11550 b7b1f171e8f2c4d0fe440ac0c7d8e31d 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.0E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11550 b7b1f171e8f2c4d0fe440ac0c7d8e31d 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.0E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11550 b7b1f171e8f2c4d0fe440ac0c7d8e31d 244 Gene3D G3DSA:3.40.50.720 4 242 6.1E-75 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS11550 b7b1f171e8f2c4d0fe440ac0c7d8e31d 244 SUPERFAMILY SSF51735 6 242 6.41E-71 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS11550 b7b1f171e8f2c4d0fe440ac0c7d8e31d 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 9.1E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11550 b7b1f171e8f2c4d0fe440ac0c7d8e31d 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 9.1E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11550 b7b1f171e8f2c4d0fe440ac0c7d8e31d 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 9.1E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11550 b7b1f171e8f2c4d0fe440ac0c7d8e31d 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 9.1E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11550 b7b1f171e8f2c4d0fe440ac0c7d8e31d 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 9.1E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11550 b7b1f171e8f2c4d0fe440ac0c7d8e31d 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 9.1E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11550 b7b1f171e8f2c4d0fe440ac0c7d8e31d 244 PANTHER PTHR24322 155 186 1.4E-51 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11550 b7b1f171e8f2c4d0fe440ac0c7d8e31d 244 PANTHER PTHR24322 10 137 1.4E-51 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS11550 b7b1f171e8f2c4d0fe440ac0c7d8e31d 244 Pfam PF00106 short chain dehydrogenase 6 197 1.7E-52 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS05840 f40c0e3fbf97b1d9d5e62a9e629918ec 204 PANTHER PTHR13256:SF20 6 204 1.9E-85 T 23-04-2016 RR42_RS05840 f40c0e3fbf97b1d9d5e62a9e629918ec 204 PANTHER PTHR13256 6 204 1.9E-85 T 23-04-2016 RR42_RS05840 f40c0e3fbf97b1d9d5e62a9e629918ec 204 SUPERFAMILY SSF55729 6 182 4.19E-32 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS05840 f40c0e3fbf97b1d9d5e62a9e629918ec 204 Pfam PF13302 Acetyltransferase (GNAT) domain 16 157 8.2E-14 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RR42_RS05840 f40c0e3fbf97b1d9d5e62a9e629918ec 204 Gene3D G3DSA:3.40.630.30 4 198 1.1E-54 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS05950 627e049ea99d7e25685539403faeab99 429 PANTHER PTHR40457 216 414 4.4E-24 T 23-04-2016 RR42_RS05950 627e049ea99d7e25685539403faeab99 429 Gene3D G3DSA:2.40.230.10 210 428 6.6E-61 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RR42_RS05950 627e049ea99d7e25685539403faeab99 429 PRINTS PR01486 Bacterial phospholipase A1 protein signature 209 226 2.6E-15 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RR42_RS05950 627e049ea99d7e25685539403faeab99 429 PRINTS PR01486 Bacterial phospholipase A1 protein signature 338 356 2.6E-15 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RR42_RS05950 627e049ea99d7e25685539403faeab99 429 PRINTS PR01486 Bacterial phospholipase A1 protein signature 399 419 2.6E-15 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RR42_RS05950 627e049ea99d7e25685539403faeab99 429 PRINTS PR01486 Bacterial phospholipase A1 protein signature 256 275 2.6E-15 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RR42_RS05950 627e049ea99d7e25685539403faeab99 429 Pfam PF02253 Phospholipase A1 213 416 3.3E-42 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RR42_RS05950 627e049ea99d7e25685539403faeab99 429 SUPERFAMILY SSF56931 190 428 1.83E-60 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RR42_RS06240 0ace159c70d6919374a03fff300f5341 400 SUPERFAMILY SSF52374 3 172 5.33E-85 T 23-04-2016 RR42_RS06240 0ace159c70d6919374a03fff300f5341 400 SUPERFAMILY SSF52374 243 397 5.33E-85 T 23-04-2016 RR42_RS06240 0ace159c70d6919374a03fff300f5341 400 PANTHER PTHR10055 5 171 4.8E-156 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RR42_RS06240 0ace159c70d6919374a03fff300f5341 400 PANTHER PTHR10055 242 400 4.8E-156 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RR42_RS06240 0ace159c70d6919374a03fff300f5341 400 Gene3D G3DSA:1.10.240.10 275 365 2.2E-29 T 23-04-2016 RR42_RS06240 0ace159c70d6919374a03fff300f5341 400 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 5 173 2.4E-55 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RR42_RS06240 0ace159c70d6919374a03fff300f5341 400 PANTHER PTHR10055:SF6 5 171 4.8E-156 T 23-04-2016 RR42_RS06240 0ace159c70d6919374a03fff300f5341 400 PANTHER PTHR10055:SF6 242 400 4.8E-156 T 23-04-2016 RR42_RS06240 0ace159c70d6919374a03fff300f5341 400 Pfam PF00579 tRNA synthetases class I (W and Y) 5 170 5.8E-47 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS06240 0ace159c70d6919374a03fff300f5341 400 Pfam PF00579 tRNA synthetases class I (W and Y) 243 343 2.2E-9 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS06240 0ace159c70d6919374a03fff300f5341 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 145 166 1.7E-22 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RR42_RS06240 0ace159c70d6919374a03fff300f5341 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 1.7E-22 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RR42_RS06240 0ace159c70d6919374a03fff300f5341 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 1.7E-22 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RR42_RS06240 0ace159c70d6919374a03fff300f5341 400 Gene3D G3DSA:3.40.50.620 241 274 4.5E-86 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS06240 0ace159c70d6919374a03fff300f5341 400 Gene3D G3DSA:3.40.50.620 4 170 4.5E-86 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS06240 0ace159c70d6919374a03fff300f5341 400 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS04750 78d2970ae04b5228f0112ac420a7ff22 345 PIRSF PIRSF017082 18 345 7.3E-82 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS04750 78d2970ae04b5228f0112ac420a7ff22 345 SUPERFAMILY SSF53850 133 300 2.44E-12 T 23-04-2016 RR42_RS04750 78d2970ae04b5228f0112ac420a7ff22 345 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 69 339 2.9E-88 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS04750 78d2970ae04b5228f0112ac420a7ff22 345 PANTHER PTHR30349:SF16 1 307 2.5E-98 T 23-04-2016 RR42_RS04750 78d2970ae04b5228f0112ac420a7ff22 345 PANTHER PTHR30349 1 307 2.5E-98 T 23-04-2016 RR42_RS07370 8655116359c9ae10b9d9348e367fef20 554 SUPERFAMILY SSF51230 123 216 7.98E-24 T 23-04-2016 IPR011053 Single hybrid motif RR42_RS07370 8655116359c9ae10b9d9348e367fef20 554 Pfam PF02817 e3 binding domain 251 285 5.9E-16 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RR42_RS07370 8655116359c9ae10b9d9348e367fef20 554 PANTHER PTHR23151 25 291 1.5E-249 T 23-04-2016 RR42_RS07370 8655116359c9ae10b9d9348e367fef20 554 PANTHER PTHR23151 310 554 1.5E-249 T 23-04-2016 RR42_RS07370 8655116359c9ae10b9d9348e367fef20 554 SUPERFAMILY SSF47005 248 289 4.97E-13 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RR42_RS07370 8655116359c9ae10b9d9348e367fef20 554 Pfam PF00364 Biotin-requiring enzyme 6 77 6.5E-21 T 23-04-2016 IPR000089 Biotin/lipoyl attachment RR42_RS07370 8655116359c9ae10b9d9348e367fef20 554 Pfam PF00364 Biotin-requiring enzyme 125 196 5.4E-22 T 23-04-2016 IPR000089 Biotin/lipoyl attachment RR42_RS07370 8655116359c9ae10b9d9348e367fef20 554 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 104 554 1.1E-191 T 23-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 RR42_RS07370 8655116359c9ae10b9d9348e367fef20 554 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RR42_RS07370 8655116359c9ae10b9d9348e367fef20 554 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 147 176 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RR42_RS07370 8655116359c9ae10b9d9348e367fef20 554 Gene3D G3DSA:3.30.559.10 318 554 2.9E-86 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain RR42_RS07370 8655116359c9ae10b9d9348e367fef20 554 Gene3D G3DSA:2.40.50.100 123 216 2.7E-23 T 23-04-2016 RR42_RS07370 8655116359c9ae10b9d9348e367fef20 554 Gene3D G3DSA:2.40.50.100 2 97 1.1E-22 T 23-04-2016 RR42_RS07370 8655116359c9ae10b9d9348e367fef20 554 Gene3D G3DSA:4.10.320.10 249 295 9.9E-21 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RR42_RS07370 8655116359c9ae10b9d9348e367fef20 554 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 327 553 2.5E-80 T 23-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 RR42_RS07370 8655116359c9ae10b9d9348e367fef20 554 SUPERFAMILY SSF52777 316 554 2.36E-85 T 23-04-2016 RR42_RS07370 8655116359c9ae10b9d9348e367fef20 554 PANTHER PTHR23151:SF68 25 291 1.5E-249 T 23-04-2016 RR42_RS07370 8655116359c9ae10b9d9348e367fef20 554 PANTHER PTHR23151:SF68 310 554 1.5E-249 T 23-04-2016 RR42_RS07370 8655116359c9ae10b9d9348e367fef20 554 SUPERFAMILY SSF51230 3 97 1.57E-23 T 23-04-2016 IPR011053 Single hybrid motif RR42_RS05640 cdfd5124b0e922a248552c7ea35c39ff 401 PANTHER PTHR30482 134 398 1.3E-169 T 23-04-2016 RR42_RS05640 cdfd5124b0e922a248552c7ea35c39ff 401 PANTHER PTHR30482 10 107 1.3E-169 T 23-04-2016 RR42_RS05640 cdfd5124b0e922a248552c7ea35c39ff 401 Pfam PF02653 Branched-chain amino acid transport system / permease component 63 358 3.2E-37 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RR42_RS05640 cdfd5124b0e922a248552c7ea35c39ff 401 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 55 369 1.6E-132 T 23-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC RR42_RS05640 cdfd5124b0e922a248552c7ea35c39ff 401 PANTHER PTHR30482:SF4 134 398 1.3E-169 T 23-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC RR42_RS05640 cdfd5124b0e922a248552c7ea35c39ff 401 PANTHER PTHR30482:SF4 10 107 1.3E-169 T 23-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC RR42_RS10565 aa0740054232a8502d941f5f64c70bf3 322 PANTHER PTHR10992 51 322 1.3E-40 T 23-04-2016 RR42_RS10565 aa0740054232a8502d941f5f64c70bf3 322 SUPERFAMILY SSF53474 51 321 2.22E-55 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS10565 aa0740054232a8502d941f5f64c70bf3 322 Pfam PF00561 alpha/beta hydrolase fold 83 306 3.8E-23 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS10565 aa0740054232a8502d941f5f64c70bf3 322 Gene3D G3DSA:3.40.50.1820 53 322 2.7E-53 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS10565 aa0740054232a8502d941f5f64c70bf3 322 PRINTS PR00111 Alpha/beta hydrolase fold signature 144 157 5.1E-10 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS10565 aa0740054232a8502d941f5f64c70bf3 322 PRINTS PR00111 Alpha/beta hydrolase fold signature 101 116 5.1E-10 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS10565 aa0740054232a8502d941f5f64c70bf3 322 PRINTS PR00111 Alpha/beta hydrolase fold signature 266 280 5.1E-10 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS10565 aa0740054232a8502d941f5f64c70bf3 322 PRINTS PR00111 Alpha/beta hydrolase fold signature 158 171 5.1E-10 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS10855 352c47113bfae3dc5f1b34a85f043fd3 405 PANTHER PTHR33121:SF13 164 395 1.2E-54 T 23-04-2016 RR42_RS10855 352c47113bfae3dc5f1b34a85f043fd3 405 SUPERFAMILY SSF141868 160 398 1.15E-64 T 23-04-2016 IPR001633 EAL domain RR42_RS10855 352c47113bfae3dc5f1b34a85f043fd3 405 SMART SM00052 123 394 5.6E-68 T 23-04-2016 IPR001633 EAL domain RR42_RS10855 352c47113bfae3dc5f1b34a85f043fd3 405 Gene3D G3DSA:3.20.20.450 163 396 9.6E-66 T 23-04-2016 IPR001633 EAL domain RR42_RS10855 352c47113bfae3dc5f1b34a85f043fd3 405 Pfam PF00563 EAL domain 164 388 2.4E-56 T 23-04-2016 IPR001633 EAL domain RR42_RS10855 352c47113bfae3dc5f1b34a85f043fd3 405 SMART SM00448 8 131 2.4E-5 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS10855 352c47113bfae3dc5f1b34a85f043fd3 405 PANTHER PTHR33121 164 395 1.2E-54 T 23-04-2016 RR42_RS10855 352c47113bfae3dc5f1b34a85f043fd3 405 SUPERFAMILY SSF52172 7 141 1.71E-18 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS10855 352c47113bfae3dc5f1b34a85f043fd3 405 Gene3D G3DSA:3.40.50.2300 7 150 1.2E-18 T 23-04-2016 RR42_RS10855 352c47113bfae3dc5f1b34a85f043fd3 405 Pfam PF00072 Response regulator receiver domain 11 79 1.4E-14 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS20250 e6b141a4bb66d35fe157f8e0a432a89c 383 PANTHER PTHR30483 4 380 1.0E-143 T 23-04-2016 RR42_RS20250 e6b141a4bb66d35fe157f8e0a432a89c 383 Gene3D G3DSA:3.40.50.2300 24 218 9.8E-47 T 23-04-2016 RR42_RS20250 e6b141a4bb66d35fe157f8e0a432a89c 383 SUPERFAMILY SSF53822 25 380 8.44E-78 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RR42_RS20250 e6b141a4bb66d35fe157f8e0a432a89c 383 Pfam PF13458 Periplasmic binding protein 24 369 2.1E-54 T 23-04-2016 IPR028081 Leucine-binding protein domain RR42_RS20250 e6b141a4bb66d35fe157f8e0a432a89c 383 PANTHER PTHR30483:SF7 4 380 1.0E-143 T 23-04-2016 RR42_RS12040 558ec8a091589eb864c17bb3fe79d7c6 439 PANTHER PTHR23513 164 317 1.5E-80 T 23-04-2016 RR42_RS12040 558ec8a091589eb864c17bb3fe79d7c6 439 PANTHER PTHR23513 1 147 1.5E-80 T 23-04-2016 RR42_RS12040 558ec8a091589eb864c17bb3fe79d7c6 439 PANTHER PTHR23513 334 425 1.5E-80 T 23-04-2016 RR42_RS12040 558ec8a091589eb864c17bb3fe79d7c6 439 SUPERFAMILY SSF103473 5 421 1.57E-23 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS12040 558ec8a091589eb864c17bb3fe79d7c6 439 PANTHER PTHR23513:SF8 164 317 1.5E-80 T 23-04-2016 RR42_RS12040 558ec8a091589eb864c17bb3fe79d7c6 439 PANTHER PTHR23513:SF8 1 147 1.5E-80 T 23-04-2016 RR42_RS12040 558ec8a091589eb864c17bb3fe79d7c6 439 PANTHER PTHR23513:SF8 334 425 1.5E-80 T 23-04-2016 RR42_RS12040 558ec8a091589eb864c17bb3fe79d7c6 439 Pfam PF07690 Major Facilitator Superfamily 9 359 1.4E-15 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS12040 558ec8a091589eb864c17bb3fe79d7c6 439 Gene3D G3DSA:1.20.1250.20 5 204 4.4E-12 T 23-04-2016 RR42_RS03815 42b83b37fcb6e703016d8b89f280a5e3 259 SUPERFAMILY SSF51735 13 258 1.12E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS03815 42b83b37fcb6e703016d8b89f280a5e3 259 Gene3D G3DSA:3.40.50.720 9 258 1.2E-65 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS03815 42b83b37fcb6e703016d8b89f280a5e3 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 1.3E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS03815 42b83b37fcb6e703016d8b89f280a5e3 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 1.3E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS03815 42b83b37fcb6e703016d8b89f280a5e3 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 1.3E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS03815 42b83b37fcb6e703016d8b89f280a5e3 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.3E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS03815 42b83b37fcb6e703016d8b89f280a5e3 259 PIRSF PIRSF000094 7 259 2.3E-85 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RR42_RS03815 42b83b37fcb6e703016d8b89f280a5e3 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 256 1.5E-79 T 23-04-2016 RR42_RS04925 6b6c306ea3dd901c38a9bb7ad36f056d 198 Hamap MF_00930 Transcription elongation factor GreB [greB]. 27 183 50.217 T 23-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 RR42_RS04925 6b6c306ea3dd901c38a9bb7ad36f056d 198 SUPERFAMILY SSF54534 108 182 5.23E-20 T 23-04-2016 RR42_RS04925 6b6c306ea3dd901c38a9bb7ad36f056d 198 Pfam PF03449 Transcription elongation factor, N-terminal 30 100 3.5E-25 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RR42_RS04925 6b6c306ea3dd901c38a9bb7ad36f056d 198 SUPERFAMILY SSF46557 29 104 1.44E-26 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RR42_RS04925 6b6c306ea3dd901c38a9bb7ad36f056d 198 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 146 162 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RR42_RS04925 6b6c306ea3dd901c38a9bb7ad36f056d 198 Gene3D G3DSA:1.10.287.180 29 101 1.7E-24 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RR42_RS04925 6b6c306ea3dd901c38a9bb7ad36f056d 198 Hamap MF_00105 Transcription elongation factor GreA [greA]. 28 181 27.832 T 23-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 RR42_RS04925 6b6c306ea3dd901c38a9bb7ad36f056d 198 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 28 183 1.8E-67 T 23-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 RR42_RS04925 6b6c306ea3dd901c38a9bb7ad36f056d 198 Gene3D G3DSA:3.10.50.30 107 187 1.1E-27 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RR42_RS04925 6b6c306ea3dd901c38a9bb7ad36f056d 198 PANTHER PTHR30437:SF6 1 190 3.5E-60 T 23-04-2016 RR42_RS04925 6b6c306ea3dd901c38a9bb7ad36f056d 198 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 109 182 2.0E-24 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RR42_RS04925 6b6c306ea3dd901c38a9bb7ad36f056d 198 PANTHER PTHR30437 1 190 3.5E-60 T 23-04-2016 RR42_RS04925 6b6c306ea3dd901c38a9bb7ad36f056d 198 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 43 74 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RR42_RS15080 0b52e183e352808deb5c045aaba66bd9 234 SMART SM00345 9 68 4.5E-16 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS15080 0b52e183e352808deb5c045aaba66bd9 234 Pfam PF07702 UTRA domain 91 227 2.0E-27 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RR42_RS15080 0b52e183e352808deb5c045aaba66bd9 234 SUPERFAMILY SSF64288 56 233 1.57E-35 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RR42_RS15080 0b52e183e352808deb5c045aaba66bd9 234 Gene3D G3DSA:3.40.1410.10 63 233 3.3E-35 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RR42_RS15080 0b52e183e352808deb5c045aaba66bd9 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 68 9.4E-15 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS15080 0b52e183e352808deb5c045aaba66bd9 234 PANTHER PTHR11751:SF333 115 138 2.4E-14 T 23-04-2016 RR42_RS15080 0b52e183e352808deb5c045aaba66bd9 234 PANTHER PTHR11751:SF333 4 71 2.4E-14 T 23-04-2016 RR42_RS15080 0b52e183e352808deb5c045aaba66bd9 234 SMART SM00866 86 228 2.3E-25 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RR42_RS15080 0b52e183e352808deb5c045aaba66bd9 234 PANTHER PTHR11751 115 138 2.4E-14 T 23-04-2016 RR42_RS15080 0b52e183e352808deb5c045aaba66bd9 234 PANTHER PTHR11751 4 71 2.4E-14 T 23-04-2016 RR42_RS15080 0b52e183e352808deb5c045aaba66bd9 234 Gene3D G3DSA:1.10.10.10 3 62 3.6E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS15080 0b52e183e352808deb5c045aaba66bd9 234 SUPERFAMILY SSF46785 4 70 1.61E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS25875 0cd0beeadd5c6edd1bfbaee858a3aff7 63 Pfam PF11940 Domain of unknown function (DUF3458) 2 63 1.7E-16 T 23-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal RR42_RS25875 0cd0beeadd5c6edd1bfbaee858a3aff7 63 Gene3D G3DSA:1.25.50.10 2 63 3.4E-17 T 23-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal RR42_RS00860 46fca014187d14aaa2b268cdfa5f9c2b 144 Gene3D G3DSA:1.10.1660.10 9 66 5.8E-20 T 23-04-2016 RR42_RS00860 46fca014187d14aaa2b268cdfa5f9c2b 144 Gene3D G3DSA:1.10.1660.10 67 128 2.2E-14 T 23-04-2016 RR42_RS00860 46fca014187d14aaa2b268cdfa5f9c2b 144 SUPERFAMILY SSF46955 10 129 3.63E-25 T 23-04-2016 IPR009061 Putative DNA-binding domain RR42_RS00860 46fca014187d14aaa2b268cdfa5f9c2b 144 Pfam PF13411 MerR HTH family regulatory protein 10 78 1.4E-15 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RR42_RS00860 46fca014187d14aaa2b268cdfa5f9c2b 144 SMART SM00422 10 80 6.2E-13 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RR42_RS00860 46fca014187d14aaa2b268cdfa5f9c2b 144 PANTHER PTHR30204 2 126 8.7E-20 T 23-04-2016 RR42_RS30500 b2cfc297edb612733dde6f0bba511e04 452 SUPERFAMILY SSF52922 86 216 1.99E-7 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RR42_RS30500 b2cfc297edb612733dde6f0bba511e04 452 SUPERFAMILY SSF52518 260 445 3.3E-9 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS30500 b2cfc297edb612733dde6f0bba511e04 452 Gene3D G3DSA:3.40.50.970 251 308 2.7E-4 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS30500 b2cfc297edb612733dde6f0bba511e04 452 Gene3D G3DSA:3.40.50.970 317 441 3.1E-7 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS30500 b2cfc297edb612733dde6f0bba511e04 452 PANTHER PTHR18968:SF134 253 449 6.3E-82 T 23-04-2016 RR42_RS30500 b2cfc297edb612733dde6f0bba511e04 452 PANTHER PTHR18968 253 449 6.3E-82 T 23-04-2016 RR42_RS12385 e21c7afcb65e4fa7c5450baae3b349d3 410 Gene3D G3DSA:2.60.120.580 213 281 1.3E-63 T 23-04-2016 RR42_RS12385 e21c7afcb65e4fa7c5450baae3b349d3 410 Gene3D G3DSA:2.60.120.580 5 94 1.3E-63 T 23-04-2016 RR42_RS12385 e21c7afcb65e4fa7c5450baae3b349d3 410 Gene3D G3DSA:2.60.120.580 147 164 1.3E-63 T 23-04-2016 RR42_RS12385 e21c7afcb65e4fa7c5450baae3b349d3 410 PANTHER PTHR31891:SF1 1 393 1.0E-237 T 23-04-2016 RR42_RS12385 e21c7afcb65e4fa7c5450baae3b349d3 410 Pfam PF03069 Acetamidase/Formamidase family 7 384 1.7E-172 T 23-04-2016 IPR004304 Acetamidase/Formamidase GO:0016811 RR42_RS12385 e21c7afcb65e4fa7c5450baae3b349d3 410 Gene3D G3DSA:3.10.28.20 323 383 2.7E-4 T 23-04-2016 RR42_RS12385 e21c7afcb65e4fa7c5450baae3b349d3 410 PANTHER PTHR31891 1 393 1.0E-237 T 23-04-2016 RR42_RS12385 e21c7afcb65e4fa7c5450baae3b349d3 410 SUPERFAMILY SSF141130 15 164 5.75E-77 T 23-04-2016 RR42_RS12385 e21c7afcb65e4fa7c5450baae3b349d3 410 SUPERFAMILY SSF141130 213 383 5.75E-77 T 23-04-2016 RR42_RS12000 133620eb7e48193bd98a3515974c0100 317 SUPERFAMILY SSF56235 3 155 5.4E-97 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RR42_RS12000 133620eb7e48193bd98a3515974c0100 317 SUPERFAMILY SSF56235 182 313 5.4E-97 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RR42_RS12000 133620eb7e48193bd98a3515974c0100 317 PANTHER PTHR10188 1 316 8.6E-133 T 23-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 RR42_RS12000 133620eb7e48193bd98a3515974c0100 317 PANTHER PTHR10188:SF24 1 316 8.6E-133 T 23-04-2016 RR42_RS12000 133620eb7e48193bd98a3515974c0100 317 Pfam PF01112 Asparaginase 4 315 1.8E-117 T 23-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 RR42_RS07950 6a82469bfeb0703ec9d48b9ec0dd86a6 562 Gene3D G3DSA:3.40.190.10 230 333 6.5E-28 T 23-04-2016 RR42_RS07950 6a82469bfeb0703ec9d48b9ec0dd86a6 562 PANTHER PTHR30290 40 562 2.3E-253 T 23-04-2016 RR42_RS07950 6a82469bfeb0703ec9d48b9ec0dd86a6 562 Gene3D G3DSA:3.90.76.10 72 229 9.8E-28 T 23-04-2016 RR42_RS07950 6a82469bfeb0703ec9d48b9ec0dd86a6 562 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 93 450 1.1E-64 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain RR42_RS07950 6a82469bfeb0703ec9d48b9ec0dd86a6 562 Gene3D G3DSA:3.10.105.10 334 532 4.1E-36 T 23-04-2016 RR42_RS07950 6a82469bfeb0703ec9d48b9ec0dd86a6 562 SUPERFAMILY SSF53850 38 555 1.57E-94 T 23-04-2016 RR42_RS07950 6a82469bfeb0703ec9d48b9ec0dd86a6 562 PIRSF PIRSF002741 19 556 4.7E-66 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RR42_RS07950 6a82469bfeb0703ec9d48b9ec0dd86a6 562 PANTHER PTHR30290:SF22 40 562 2.3E-253 T 23-04-2016 RR42_RS04520 a54c3a78d5d30f337b38b350d06908a0 331 Gene3D G3DSA:3.90.25.10 171 309 2.1E-30 T 23-04-2016 RR42_RS04520 a54c3a78d5d30f337b38b350d06908a0 331 Gene3D G3DSA:3.40.50.720 1 170 1.2E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS04520 a54c3a78d5d30f337b38b350d06908a0 331 PANTHER PTHR10366:SF469 2 265 1.0E-99 T 23-04-2016 RR42_RS04520 a54c3a78d5d30f337b38b350d06908a0 331 PANTHER PTHR10366:SF469 281 330 1.0E-99 T 23-04-2016 RR42_RS04520 a54c3a78d5d30f337b38b350d06908a0 331 SUPERFAMILY SSF51735 1 329 8.89E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS04520 a54c3a78d5d30f337b38b350d06908a0 331 PANTHER PTHR10366 2 265 1.0E-99 T 23-04-2016 RR42_RS04520 a54c3a78d5d30f337b38b350d06908a0 331 PANTHER PTHR10366 281 330 1.0E-99 T 23-04-2016 RR42_RS04520 a54c3a78d5d30f337b38b350d06908a0 331 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 241 9.2E-45 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RR42_RS04520 a54c3a78d5d30f337b38b350d06908a0 331 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 2 329 59.226 T 23-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 RR42_RS04520 a54c3a78d5d30f337b38b350d06908a0 331 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 3 328 2.1E-135 T 23-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 RR42_RS24010 cc01cb14c6debf2187651c3231a73f11 60 PANTHER PTHR11817 2 60 3.2E-21 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS24010 cc01cb14c6debf2187651c3231a73f11 60 SUPERFAMILY SSF50800 1 40 2.62E-8 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain RR42_RS24010 cc01cb14c6debf2187651c3231a73f11 60 Pfam PF00224 Pyruvate kinase, barrel domain 1 57 2.7E-9 T 23-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS24010 cc01cb14c6debf2187651c3231a73f11 60 Gene3D G3DSA:2.40.33.10 1 43 3.4E-12 T 23-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS24010 cc01cb14c6debf2187651c3231a73f11 60 PANTHER PTHR11817:SF17 2 60 3.2E-21 T 23-04-2016 RR42_RS16915 72c82a825943755856b39ed2894fd4a0 573 Gene3D G3DSA:3.40.1770.10 17 149 1.8E-161 T 23-04-2016 RR42_RS16915 72c82a825943755856b39ed2894fd4a0 573 Gene3D G3DSA:3.40.1770.10 372 566 1.8E-161 T 23-04-2016 RR42_RS16915 72c82a825943755856b39ed2894fd4a0 573 PANTHER PTHR12216:SF3 14 567 0.0 T 23-04-2016 RR42_RS16915 72c82a825943755856b39ed2894fd4a0 573 PIRSF PIRSF001423 3 572 6.8E-295 T 23-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RR42_RS16915 72c82a825943755856b39ed2894fd4a0 573 PANTHER PTHR12216 14 567 0.0 T 23-04-2016 RR42_RS16915 72c82a825943755856b39ed2894fd4a0 573 ProSitePatterns PS01233 Urocanase signature. 454 469 - T 23-04-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RR42_RS16915 72c82a825943755856b39ed2894fd4a0 573 Pfam PF01175 Urocanase 20 559 7.6E-260 T 23-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RR42_RS16915 72c82a825943755856b39ed2894fd4a0 573 SUPERFAMILY SSF111326 15 567 8.5E-259 T 23-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RR42_RS16915 72c82a825943755856b39ed2894fd4a0 573 Gene3D G3DSA:3.40.50.10730 150 361 1.9E-92 T 23-04-2016 RR42_RS16915 72c82a825943755856b39ed2894fd4a0 573 TIGRFAM TIGR01228 hutU: urocanate hydratase 18 566 7.4E-293 T 23-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RR42_RS16915 72c82a825943755856b39ed2894fd4a0 573 Hamap MF_00577 Urocanate hydratase [hutU]. 5 568 50.375 T 23-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RR42_RS15955 7168f67b1d1191f881e95c2c714c9bd8 179 SUPERFAMILY SSF49329 34 176 1.96E-44 T 23-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RR42_RS15955 7168f67b1d1191f881e95c2c714c9bd8 179 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 165 176 - T 23-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 RR42_RS15955 7168f67b1d1191f881e95c2c714c9bd8 179 Gene3D G3DSA:2.60.40.200 35 177 2.5E-51 T 23-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RR42_RS15955 7168f67b1d1191f881e95c2c714c9bd8 179 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 44 176 6.5E-45 T 23-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RR42_RS15955 7168f67b1d1191f881e95c2c714c9bd8 179 PANTHER PTHR10003 26 179 6.0E-47 T 23-04-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 RR42_RS15955 7168f67b1d1191f881e95c2c714c9bd8 179 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 75 85 - T 23-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 RR42_RS04900 65a643eac45aeccbf73e8e1ccd4390eb 350 PANTHER PTHR24362 20 61 1.6E-52 T 23-04-2016 RR42_RS04900 65a643eac45aeccbf73e8e1ccd4390eb 350 PANTHER PTHR24362 81 301 1.6E-52 T 23-04-2016 RR42_RS04900 65a643eac45aeccbf73e8e1ccd4390eb 350 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 166 178 - T 23-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RR42_RS04900 65a643eac45aeccbf73e8e1ccd4390eb 350 SMART SM00220 24 299 2.5E-30 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RR42_RS04900 65a643eac45aeccbf73e8e1ccd4390eb 350 SUPERFAMILY SSF56112 21 300 1.46E-54 T 23-04-2016 IPR011009 Protein kinase-like domain RR42_RS04900 65a643eac45aeccbf73e8e1ccd4390eb 350 Pfam PF00069 Protein kinase domain 24 289 3.9E-36 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RR42_RS04900 65a643eac45aeccbf73e8e1ccd4390eb 350 Gene3D G3DSA:1.10.510.10 107 290 1.3E-39 T 23-04-2016 RR42_RS04900 65a643eac45aeccbf73e8e1ccd4390eb 350 Gene3D G3DSA:3.30.200.20 19 106 1.2E-15 T 23-04-2016 RR42_RS07700 5863c2363df36d794f444d69ef343b97 98 PANTHER PTHR37828:SF1 1 97 1.2E-21 T 23-04-2016 RR42_RS07700 5863c2363df36d794f444d69ef343b97 98 SUPERFAMILY SSF54909 1 83 6.7E-15 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RR42_RS07700 5863c2363df36d794f444d69ef343b97 98 Pfam PF03795 YCII-related domain 1 82 4.6E-9 T 23-04-2016 IPR005545 YCII-related RR42_RS07700 5863c2363df36d794f444d69ef343b97 98 PANTHER PTHR37828 1 97 1.2E-21 T 23-04-2016 RR42_RS07700 5863c2363df36d794f444d69ef343b97 98 Gene3D G3DSA:3.30.70.1060 2 82 5.4E-5 T 23-04-2016 RR42_RS04550 69f4d7e238d8d5fc95460f4325bcb525 267 Gene3D G3DSA:1.10.12.10 213 264 1.7E-14 T 23-04-2016 IPR014748 Crontonase, C-terminal RR42_RS04550 69f4d7e238d8d5fc95460f4325bcb525 267 PANTHER PTHR11941 1 264 7.1E-117 T 23-04-2016 RR42_RS04550 69f4d7e238d8d5fc95460f4325bcb525 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 21 265 5.1E-53 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RR42_RS04550 69f4d7e238d8d5fc95460f4325bcb525 267 SUPERFAMILY SSF52096 19 264 2.34E-76 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS04550 69f4d7e238d8d5fc95460f4325bcb525 267 Gene3D G3DSA:3.90.226.10 19 206 2.2E-60 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS04550 69f4d7e238d8d5fc95460f4325bcb525 267 PANTHER PTHR11941:SF28 1 264 7.1E-117 T 23-04-2016 RR42_RS03800 4597b69a001cf50c4af7a9a0ac9afbcd 408 Pfam PF00871 Acetokinase family 8 394 1.5E-102 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RR42_RS03800 4597b69a001cf50c4af7a9a0ac9afbcd 408 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 214 231 - T 23-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RR42_RS03800 4597b69a001cf50c4af7a9a0ac9afbcd 408 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 8 19 - T 23-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RR42_RS03800 4597b69a001cf50c4af7a9a0ac9afbcd 408 Gene3D G3DSA:3.30.420.40 116 215 1.1E-9 T 23-04-2016 RR42_RS03800 4597b69a001cf50c4af7a9a0ac9afbcd 408 TIGRFAM TIGR00016 ackA: acetate kinase 6 401 2.7E-106 T 23-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RR42_RS03800 4597b69a001cf50c4af7a9a0ac9afbcd 408 SUPERFAMILY SSF53067 7 206 1.42E-55 T 23-04-2016 RR42_RS03800 4597b69a001cf50c4af7a9a0ac9afbcd 408 PIRSF PIRSF000722 4 405 7.2E-133 T 23-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RR42_RS03800 4597b69a001cf50c4af7a9a0ac9afbcd 408 Gene3D G3DSA:3.30.420.40 216 400 1.3E-67 T 23-04-2016 RR42_RS03800 4597b69a001cf50c4af7a9a0ac9afbcd 408 PRINTS PR00471 Acetate kinase family signature 214 235 9.9E-40 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RR42_RS03800 4597b69a001cf50c4af7a9a0ac9afbcd 408 PRINTS PR00471 Acetate kinase family signature 382 394 9.9E-40 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RR42_RS03800 4597b69a001cf50c4af7a9a0ac9afbcd 408 PRINTS PR00471 Acetate kinase family signature 307 320 9.9E-40 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RR42_RS03800 4597b69a001cf50c4af7a9a0ac9afbcd 408 PRINTS PR00471 Acetate kinase family signature 185 198 9.9E-40 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RR42_RS03800 4597b69a001cf50c4af7a9a0ac9afbcd 408 PRINTS PR00471 Acetate kinase family signature 8 19 9.9E-40 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RR42_RS03800 4597b69a001cf50c4af7a9a0ac9afbcd 408 PRINTS PR00471 Acetate kinase family signature 329 345 9.9E-40 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RR42_RS03800 4597b69a001cf50c4af7a9a0ac9afbcd 408 PANTHER PTHR21060 4 407 2.4E-148 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RR42_RS03800 4597b69a001cf50c4af7a9a0ac9afbcd 408 SUPERFAMILY SSF53067 170 400 3.35E-75 T 23-04-2016 RR42_RS03800 4597b69a001cf50c4af7a9a0ac9afbcd 408 Hamap MF_00020 Acetate kinase [ackA]. 1 405 151.737 T 23-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RR42_RS03800 4597b69a001cf50c4af7a9a0ac9afbcd 408 PANTHER PTHR21060:SF11 4 407 2.4E-148 T 23-04-2016 RR42_RS18165 8e59ae89b3ea6e8f2355adb36fce1111 1112 Pfam PF02785 Biotin carboxylase C-terminal domain 348 458 5.2E-29 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal RR42_RS18165 8e59ae89b3ea6e8f2355adb36fce1111 1112 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RR42_RS18165 8e59ae89b3ea6e8f2355adb36fce1111 1112 Gene3D G3DSA:3.90.226.10 601 842 3.9E-42 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS18165 8e59ae89b3ea6e8f2355adb36fce1111 1112 Gene3D G3DSA:3.90.226.10 843 1094 5.5E-58 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS18165 8e59ae89b3ea6e8f2355adb36fce1111 1112 SUPERFAMILY SSF52440 2 112 2.66E-39 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RR42_RS18165 8e59ae89b3ea6e8f2355adb36fce1111 1112 SMART SM00878 348 458 1.6E-42 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal RR42_RS18165 8e59ae89b3ea6e8f2355adb36fce1111 1112 SUPERFAMILY SSF51246 342 461 2.83E-28 T 23-04-2016 IPR011054 Rudiment single hybrid motif RR42_RS18165 8e59ae89b3ea6e8f2355adb36fce1111 1112 Pfam PF00364 Biotin-requiring enzyme 507 570 2.6E-13 T 23-04-2016 IPR000089 Biotin/lipoyl attachment RR42_RS18165 8e59ae89b3ea6e8f2355adb36fce1111 1112 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 333 1.5E-59 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RR42_RS18165 8e59ae89b3ea6e8f2355adb36fce1111 1112 SUPERFAMILY SSF51230 496 570 6.81E-18 T 23-04-2016 IPR011053 Single hybrid motif RR42_RS18165 8e59ae89b3ea6e8f2355adb36fce1111 1112 PANTHER PTHR18866 1 575 6.2E-205 T 23-04-2016 RR42_RS18165 8e59ae89b3ea6e8f2355adb36fce1111 1112 SUPERFAMILY SSF52096 595 851 1.61E-51 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS18165 8e59ae89b3ea6e8f2355adb36fce1111 1112 SUPERFAMILY SSF52096 842 1096 7.82E-65 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS18165 8e59ae89b3ea6e8f2355adb36fce1111 1112 Gene3D G3DSA:3.30.470.20 209 463 6.7E-80 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RR42_RS18165 8e59ae89b3ea6e8f2355adb36fce1111 1112 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 527 544 - T 23-04-2016 IPR001882 Biotin-binding site RR42_RS18165 8e59ae89b3ea6e8f2355adb36fce1111 1112 Gene3D G3DSA:3.30.1490.20 130 205 3.2E-18 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RR42_RS18165 8e59ae89b3ea6e8f2355adb36fce1111 1112 SUPERFAMILY SSF56059 83 338 1.61E-53 T 23-04-2016 RR42_RS18165 8e59ae89b3ea6e8f2355adb36fce1111 1112 Gene3D G3DSA:3.40.50.20 3 129 6.5E-44 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RR42_RS18165 8e59ae89b3ea6e8f2355adb36fce1111 1112 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 110 2.2E-38 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain RR42_RS18165 8e59ae89b3ea6e8f2355adb36fce1111 1112 Pfam PF01039 Carboxyl transferase domain 616 1089 2.7E-73 T 23-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RR42_RS18165 8e59ae89b3ea6e8f2355adb36fce1111 1112 Gene3D G3DSA:2.40.50.100 500 570 7.1E-20 T 23-04-2016 RR42_RS14875 abbc62bfb2bf9abe781df9b85f776e03 4534 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 181 255 2.9E-21 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal RR42_RS14875 abbc62bfb2bf9abe781df9b85f776e03 4534 Pfam PF05860 haemagglutination activity domain 168 255 5.3E-19 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal RR42_RS14875 abbc62bfb2bf9abe781df9b85f776e03 4534 SUPERFAMILY SSF51126 482 505 2.45E-34 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor RR42_RS14875 abbc62bfb2bf9abe781df9b85f776e03 4534 SUPERFAMILY SSF51126 291 434 2.45E-34 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor RR42_RS14875 abbc62bfb2bf9abe781df9b85f776e03 4534 SUPERFAMILY SSF51126 165 264 2.45E-34 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor RR42_RS14875 abbc62bfb2bf9abe781df9b85f776e03 4534 PANTHER PTHR12338 318 970 0.0 T 23-04-2016 RR42_RS14875 abbc62bfb2bf9abe781df9b85f776e03 4534 PANTHER PTHR12338 92 302 0.0 T 23-04-2016 RR42_RS14875 abbc62bfb2bf9abe781df9b85f776e03 4534 PANTHER PTHR12338 1124 3784 0.0 T 23-04-2016 RR42_RS14875 abbc62bfb2bf9abe781df9b85f776e03 4534 PANTHER PTHR12338:SF6 318 970 0.0 T 23-04-2016 RR42_RS14875 abbc62bfb2bf9abe781df9b85f776e03 4534 PANTHER PTHR12338:SF6 92 302 0.0 T 23-04-2016 RR42_RS14875 abbc62bfb2bf9abe781df9b85f776e03 4534 PANTHER PTHR12338:SF6 1124 3784 0.0 T 23-04-2016 RR42_RS14875 abbc62bfb2bf9abe781df9b85f776e03 4534 SMART SM00912 150 260 8.7E-26 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal RR42_RS14875 abbc62bfb2bf9abe781df9b85f776e03 4534 Pfam PF12545 Filamentous haemagglutinin family outer membrane protein 4321 4431 3.4E-39 T 23-04-2016 IPR021026 Filamentous haemagglutinin family outer membrane protein, domain of unknown function DUF3739 RR42_RS01760 a7edcacd2526dc41c89c061155b60085 511 PANTHER PTHR11730 248 510 1.4E-179 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RR42_RS01760 a7edcacd2526dc41c89c061155b60085 511 PANTHER PTHR11730 53 229 1.4E-179 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RR42_RS01760 a7edcacd2526dc41c89c061155b60085 511 TIGRFAM TIGR00836 amt: ammonium transporter 81 509 9.4E-136 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RR42_RS01760 a7edcacd2526dc41c89c061155b60085 511 SUPERFAMILY SSF111352 78 490 1.96E-125 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RR42_RS01760 a7edcacd2526dc41c89c061155b60085 511 ProSitePatterns PS01219 Ammonium transporters signature. 257 282 - T 23-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 RR42_RS01760 a7edcacd2526dc41c89c061155b60085 511 Gene3D G3DSA:1.10.3430.10 76 490 1.2E-140 T 23-04-2016 IPR029020 Ammonium/urea transporter RR42_RS01760 a7edcacd2526dc41c89c061155b60085 511 PANTHER PTHR11730:SF17 248 510 1.4E-179 T 23-04-2016 RR42_RS01760 a7edcacd2526dc41c89c061155b60085 511 PANTHER PTHR11730:SF17 53 229 1.4E-179 T 23-04-2016 RR42_RS01760 a7edcacd2526dc41c89c061155b60085 511 Pfam PF00909 Ammonium Transporter Family 83 509 3.0E-122 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RR42_RS03755 95021d546b11e2e82e07eb5a82732e5c 517 SUPERFAMILY SSF142984 340 421 1.57E-20 T 23-04-2016 RR42_RS03755 95021d546b11e2e82e07eb5a82732e5c 517 PANTHER PTHR11780 2 508 2.4E-226 T 23-04-2016 RR42_RS03755 95021d546b11e2e82e07eb5a82732e5c 517 Gene3D G3DSA:3.40.30.10 9 82 6.2E-5 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS03755 95021d546b11e2e82e07eb5a82732e5c 517 SUPERFAMILY SSF52833 3 85 1.9E-8 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS03755 95021d546b11e2e82e07eb5a82732e5c 517 SMART SM00928 426 471 1.0E-17 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 RR42_RS03755 95021d546b11e2e82e07eb5a82732e5c 517 PANTHER PTHR11780:SF0 2 508 2.4E-226 T 23-04-2016 RR42_RS03755 95021d546b11e2e82e07eb5a82732e5c 517 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 264 279 - T 23-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 RR42_RS03755 95021d546b11e2e82e07eb5a82732e5c 517 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 145 316 2.3E-46 T 23-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain RR42_RS03755 95021d546b11e2e82e07eb5a82732e5c 517 SUPERFAMILY SSF142019 97 337 1.31E-85 T 23-04-2016 RR42_RS03755 95021d546b11e2e82e07eb5a82732e5c 517 SUPERFAMILY SSF140490 423 508 8.11E-28 T 23-04-2016 RR42_RS03755 95021d546b11e2e82e07eb5a82732e5c 517 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 428 509 8.6E-30 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 RR42_RS03755 95021d546b11e2e82e07eb5a82732e5c 517 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 439 450 - T 23-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 RR42_RS18435 3fef1b220d5460570b2bd961afd74978 137 PANTHER PTHR34610 1 132 4.2E-36 T 23-04-2016 RR42_RS18435 3fef1b220d5460570b2bd961afd74978 137 SMART SM00670 4 118 2.4E-4 T 23-04-2016 IPR002716 PIN domain RR42_RS18435 3fef1b220d5460570b2bd961afd74978 137 PANTHER PTHR34610:SF3 1 132 4.2E-36 T 23-04-2016 RR42_RS18435 3fef1b220d5460570b2bd961afd74978 137 Pfam PF13470 PIN domain 5 114 1.6E-20 T 23-04-2016 IPR002716 PIN domain RR42_RS18435 3fef1b220d5460570b2bd961afd74978 137 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 5 119 3.8E-17 T 23-04-2016 IPR002850 PIN family, putative toxin-antitoxin system toxin component RR42_RS18435 3fef1b220d5460570b2bd961afd74978 137 SUPERFAMILY SSF88723 1 122 1.82E-13 T 23-04-2016 IPR029060 PIN domain-like RR42_RS08235 ebd86a2ca763e0f37db6c15633fbe4ab 428 Pfam PF03237 Terminase-like family 25 409 9.8E-51 T 23-04-2016 IPR004921 Terminase, large subunit RR42_RS08235 ebd86a2ca763e0f37db6c15633fbe4ab 428 SUPERFAMILY SSF52540 20 153 5.91E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS00300 4ad31f080bc044dc791e6881747228dd 282 Gene3D G3DSA:3.30.200.20 16 124 1.0E-11 T 23-04-2016 RR42_RS00300 4ad31f080bc044dc791e6881747228dd 282 PANTHER PTHR10593:SF19 6 277 8.2E-114 T 23-04-2016 RR42_RS00300 4ad31f080bc044dc791e6881747228dd 282 Pfam PF01163 RIO1 family 31 218 5.8E-41 T 23-04-2016 RR42_RS00300 4ad31f080bc044dc791e6881747228dd 282 Gene3D G3DSA:1.10.510.10 139 216 3.7E-18 T 23-04-2016 RR42_RS00300 4ad31f080bc044dc791e6881747228dd 282 PANTHER PTHR10593 6 277 8.2E-114 T 23-04-2016 RR42_RS00300 4ad31f080bc044dc791e6881747228dd 282 SUPERFAMILY SSF56112 18 213 3.23E-21 T 23-04-2016 IPR011009 Protein kinase-like domain RR42_RS00300 4ad31f080bc044dc791e6881747228dd 282 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 23-04-2016 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 RR42_RS00300 4ad31f080bc044dc791e6881747228dd 282 SMART SM00090 2 234 2.2E-16 T 23-04-2016 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 RR42_RS12715 ed768fedb4f0f9542b70937b9bf9013b 250 SUPERFAMILY SSF54534 112 204 7.2E-17 T 23-04-2016 RR42_RS12715 ed768fedb4f0f9542b70937b9bf9013b 250 PANTHER PTHR10657:SF11 30 244 2.0E-25 T 23-04-2016 RR42_RS12715 ed768fedb4f0f9542b70937b9bf9013b 250 SUPERFAMILY SSF109998 4 143 1.88E-19 T 23-04-2016 IPR027304 Trigger factor/SurA domain RR42_RS12715 ed768fedb4f0f9542b70937b9bf9013b 250 Pfam PF00639 PPIC-type PPIASE domain 134 213 8.7E-12 T 23-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 RR42_RS12715 ed768fedb4f0f9542b70937b9bf9013b 250 PANTHER PTHR10657 30 244 2.0E-25 T 23-04-2016 RR42_RS12715 ed768fedb4f0f9542b70937b9bf9013b 250 Gene3D G3DSA:3.10.50.40 125 236 1.7E-18 T 23-04-2016 RR42_RS05375 56caba406171454487ca003b2375dc9a 145 Gene3D G3DSA:1.10.490.10 22 143 1.4E-42 T 23-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 RR42_RS05375 56caba406171454487ca003b2375dc9a 145 Pfam PF01152 Bacterial-like globin 22 139 8.8E-45 T 23-04-2016 IPR001486 Truncated hemoglobin GO:0019825 RR42_RS05375 56caba406171454487ca003b2375dc9a 145 PANTHER PTHR10681 22 142 5.9E-16 T 23-04-2016 RR42_RS05375 56caba406171454487ca003b2375dc9a 145 SUPERFAMILY SSF46458 22 142 2.26E-36 T 23-04-2016 IPR009050 Globin-like RR42_RS17485 2df64517271080ace614c9b9cb1bb14f 270 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 43 270 9.6E-82 T 23-04-2016 IPR010239 Conserved hypothetical protein CHP02001 RR42_RS17485 2df64517271080ace614c9b9cb1bb14f 270 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 20 270 2.3E-64 T 23-04-2016 IPR010239 Conserved hypothetical protein CHP02001 RR42_RS17485 2df64517271080ace614c9b9cb1bb14f 270 Gene3D G3DSA:2.40.160.10 165 246 5.1E-5 T 23-04-2016 IPR023614 Porin domain RR42_RS07470 53b811efa99e7526e6323f4bb0de083b 282 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 20 90 2.4E-18 T 23-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 RR42_RS07470 53b811efa99e7526e6323f4bb0de083b 282 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 3 246 44.626 T 23-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic RR42_RS07470 53b811efa99e7526e6323f4bb0de083b 282 SUPERFAMILY SSF55729 84 244 1.38E-14 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS07470 53b811efa99e7526e6323f4bb0de083b 282 PANTHER PTHR21367:SF0 20 247 1.8E-56 T 23-04-2016 RR42_RS07470 53b811efa99e7526e6323f4bb0de083b 282 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 110 237 6.1E-37 T 23-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 RR42_RS07470 53b811efa99e7526e6323f4bb0de083b 282 PANTHER PTHR21367 20 247 1.8E-56 T 23-04-2016 IPR030700 Arginine-tRNA-protein transferase RR42_RS07470 53b811efa99e7526e6323f4bb0de083b 282 PIRSF PIRSF037208 3 255 2.0E-90 T 23-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic RR42_RS12200 3aa1aadffcb3d0e90ce24a7f7a814d35 430 ProSitePatterns PS00161 Isocitrate lyase signature. 185 190 - T 23-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 RR42_RS12200 3aa1aadffcb3d0e90ce24a7f7a814d35 430 Gene3D G3DSA:3.20.20.60 8 406 7.0E-165 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS12200 3aa1aadffcb3d0e90ce24a7f7a814d35 430 SUPERFAMILY SSF51621 6 424 1.17E-158 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS12200 3aa1aadffcb3d0e90ce24a7f7a814d35 430 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 8 247 6.6E-109 T 23-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 RR42_RS12200 3aa1aadffcb3d0e90ce24a7f7a814d35 430 Pfam PF00463 Isocitrate lyase family 12 247 2.2E-57 T 23-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 RR42_RS12200 3aa1aadffcb3d0e90ce24a7f7a814d35 430 Pfam PF00463 Isocitrate lyase family 248 422 1.6E-46 T 23-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 RR42_RS12200 3aa1aadffcb3d0e90ce24a7f7a814d35 430 PIRSF PIRSF001362 1 427 6.2E-240 T 23-04-2016 RR42_RS12200 3aa1aadffcb3d0e90ce24a7f7a814d35 430 PANTHER PTHR21631 1 424 2.6E-168 T 23-04-2016 RR42_RS12535 cf22271a840c181484d9470ea1a8ec41 482 Gene3D G3DSA:3.40.50.1100 216 453 1.7E-85 T 23-04-2016 RR42_RS12535 cf22271a840c181484d9470ea1a8ec41 482 Pfam PF14821 Threonine synthase N terminus 2 79 8.2E-30 T 23-04-2016 IPR029144 Threonine synthase, N-terminal RR42_RS12535 cf22271a840c181484d9470ea1a8ec41 482 SUPERFAMILY SSF53686 1 480 2.36E-149 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RR42_RS12535 cf22271a840c181484d9470ea1a8ec41 482 TIGRFAM TIGR00260 thrC: threonine synthase 108 445 1.4E-66 T 23-04-2016 IPR004450 Threonine synthase-like RR42_RS12535 cf22271a840c181484d9470ea1a8ec41 482 PANTHER PTHR10314:SF1 53 346 1.4E-116 T 23-04-2016 RR42_RS12535 cf22271a840c181484d9470ea1a8ec41 482 PANTHER PTHR10314:SF1 380 476 1.4E-116 T 23-04-2016 RR42_RS12535 cf22271a840c181484d9470ea1a8ec41 482 PANTHER PTHR10314:SF1 25 36 1.4E-116 T 23-04-2016 RR42_RS12535 cf22271a840c181484d9470ea1a8ec41 482 Gene3D G3DSA:3.90.1380.10 1 82 6.6E-33 T 23-04-2016 IPR029144 Threonine synthase, N-terminal RR42_RS12535 cf22271a840c181484d9470ea1a8ec41 482 PANTHER PTHR10314 53 346 1.4E-116 T 23-04-2016 RR42_RS12535 cf22271a840c181484d9470ea1a8ec41 482 PANTHER PTHR10314 380 476 1.4E-116 T 23-04-2016 RR42_RS12535 cf22271a840c181484d9470ea1a8ec41 482 PANTHER PTHR10314 25 36 1.4E-116 T 23-04-2016 RR42_RS12535 cf22271a840c181484d9470ea1a8ec41 482 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 98 346 2.4E-10 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RR42_RS12535 cf22271a840c181484d9470ea1a8ec41 482 Gene3D G3DSA:3.40.50.1100 123 215 1.5E-7 T 23-04-2016 RR42_RS09075 02b2f9f7584164c5f650c1535ac2e2c3 432 Gene3D G3DSA:3.50.50.60 189 280 1.4E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS09075 02b2f9f7584164c5f650c1535ac2e2c3 432 Gene3D G3DSA:3.50.50.60 371 427 1.4E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS09075 02b2f9f7584164c5f650c1535ac2e2c3 432 Gene3D G3DSA:3.50.50.60 108 130 1.4E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS09075 02b2f9f7584164c5f650c1535ac2e2c3 432 Gene3D G3DSA:3.50.50.60 1 58 1.4E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS09075 02b2f9f7584164c5f650c1535ac2e2c3 432 Pfam PF01266 FAD dependent oxidoreductase 2 409 5.2E-59 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RR42_RS09075 02b2f9f7584164c5f650c1535ac2e2c3 432 SUPERFAMILY SSF54373 281 371 1.03E-15 T 23-04-2016 RR42_RS09075 02b2f9f7584164c5f650c1535ac2e2c3 432 PANTHER PTHR13847 1 63 1.0E-121 T 23-04-2016 RR42_RS09075 02b2f9f7584164c5f650c1535ac2e2c3 432 PANTHER PTHR13847 107 237 1.0E-121 T 23-04-2016 RR42_RS09075 02b2f9f7584164c5f650c1535ac2e2c3 432 PANTHER PTHR13847 255 427 1.0E-121 T 23-04-2016 RR42_RS09075 02b2f9f7584164c5f650c1535ac2e2c3 432 Gene3D G3DSA:3.30.9.10 134 188 3.7E-15 T 23-04-2016 RR42_RS09075 02b2f9f7584164c5f650c1535ac2e2c3 432 Gene3D G3DSA:3.30.9.10 281 369 3.7E-15 T 23-04-2016 RR42_RS09075 02b2f9f7584164c5f650c1535ac2e2c3 432 PANTHER PTHR13847:SF148 1 63 1.0E-121 T 23-04-2016 RR42_RS09075 02b2f9f7584164c5f650c1535ac2e2c3 432 PANTHER PTHR13847:SF148 107 237 1.0E-121 T 23-04-2016 RR42_RS09075 02b2f9f7584164c5f650c1535ac2e2c3 432 PANTHER PTHR13847:SF148 255 427 1.0E-121 T 23-04-2016 RR42_RS09075 02b2f9f7584164c5f650c1535ac2e2c3 432 SUPERFAMILY SSF51905 1 54 2.33E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS09075 02b2f9f7584164c5f650c1535ac2e2c3 432 SUPERFAMILY SSF51905 371 429 2.33E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS09075 02b2f9f7584164c5f650c1535ac2e2c3 432 SUPERFAMILY SSF51905 107 281 2.33E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS08140 133a953719aabeeaf931af0021bd6c08 219 Gene3D G3DSA:2.10.109.10 124 211 3.2E-14 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RR42_RS08140 133a953719aabeeaf931af0021bd6c08 219 Pfam PF00717 Peptidase S24-like 132 198 2.1E-10 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B RR42_RS08140 133a953719aabeeaf931af0021bd6c08 219 SUPERFAMILY SSF51306 87 211 1.33E-17 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RR42_RS08140 133a953719aabeeaf931af0021bd6c08 219 Gene3D G3DSA:1.10.260.40 1 57 1.4E-4 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS06255 7ddcdee12c209d017bdea1bc8796db4b 403 Pfam PF06804 NlpB/DapX lipoprotein 49 398 4.1E-52 T 23-04-2016 IPR010653 NlpB/DapX lipoprotein RR42_RS00210 324eac40243868f364a242aa03d92175 241 Pfam PF00005 ABC transporter 25 170 3.1E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS00210 324eac40243868f364a242aa03d92175 241 PANTHER PTHR24220 11 241 6.9E-113 T 23-04-2016 RR42_RS00210 324eac40243868f364a242aa03d92175 241 SMART SM00382 34 232 1.9E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS00210 324eac40243868f364a242aa03d92175 241 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS00210 324eac40243868f364a242aa03d92175 241 PANTHER PTHR24220:SF568 11 241 6.9E-113 T 23-04-2016 RR42_RS00210 324eac40243868f364a242aa03d92175 241 SUPERFAMILY SSF52540 9 240 6.48E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS00210 324eac40243868f364a242aa03d92175 241 Gene3D G3DSA:3.40.50.300 8 236 1.1E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS37715 7567fd3c3cfab82c28129643a0c8f9e7 131 PANTHER PTHR26402:SF458 1 122 9.0E-15 T 23-04-2016 RR42_RS37715 7567fd3c3cfab82c28129643a0c8f9e7 131 SMART SM00421 66 123 3.5E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS37715 7567fd3c3cfab82c28129643a0c8f9e7 131 Gene3D G3DSA:1.10.10.10 36 123 9.5E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS37715 7567fd3c3cfab82c28129643a0c8f9e7 131 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 99 111 6.6E-6 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS37715 7567fd3c3cfab82c28129643a0c8f9e7 131 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 83 99 6.6E-6 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS37715 7567fd3c3cfab82c28129643a0c8f9e7 131 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 69 83 6.6E-6 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS37715 7567fd3c3cfab82c28129643a0c8f9e7 131 SUPERFAMILY SSF46894 55 126 4.42E-15 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS37715 7567fd3c3cfab82c28129643a0c8f9e7 131 Pfam PF00196 Bacterial regulatory proteins, luxR family 68 122 9.8E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS37715 7567fd3c3cfab82c28129643a0c8f9e7 131 PANTHER PTHR26402 1 122 9.0E-15 T 23-04-2016 RR42_RS37100 5a3fb089b0116b368a4e4037d632d9c6 199 Gene3D G3DSA:3.40.50.1220 149 199 8.9E-14 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RR42_RS37100 5a3fb089b0116b368a4e4037d632d9c6 199 Pfam PF02233 NAD(P) transhydrogenase beta subunit 1 199 2.4E-70 T 23-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 RR42_RS37100 5a3fb089b0116b368a4e4037d632d9c6 199 PANTHER PTHR10160 1 199 2.5E-82 T 23-04-2016 RR42_RS37100 5a3fb089b0116b368a4e4037d632d9c6 199 PANTHER PTHR10160:SF24 1 199 2.5E-82 T 23-04-2016 RR42_RS37100 5a3fb089b0116b368a4e4037d632d9c6 199 SUPERFAMILY SSF52467 153 199 1.45E-12 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RR42_RS13385 b29b15747715eca8d1fb1116ae143552 626 SUPERFAMILY SSF53850 65 377 8.69E-118 T 23-04-2016 RR42_RS13385 b29b15747715eca8d1fb1116ae143552 626 SUPERFAMILY SSF53850 409 618 8.69E-118 T 23-04-2016 RR42_RS13385 b29b15747715eca8d1fb1116ae143552 626 Gene3D G3DSA:3.40.190.10 178 339 2.3E-32 T 23-04-2016 RR42_RS13385 b29b15747715eca8d1fb1116ae143552 626 PIRSF PIRSF002741 15 617 4.3E-97 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RR42_RS13385 b29b15747715eca8d1fb1116ae143552 626 PANTHER PTHR30290 9 376 1.1E-165 T 23-04-2016 RR42_RS13385 b29b15747715eca8d1fb1116ae143552 626 PANTHER PTHR30290 405 626 1.1E-165 T 23-04-2016 RR42_RS13385 b29b15747715eca8d1fb1116ae143552 626 PANTHER PTHR30290:SF2 9 376 1.1E-165 T 23-04-2016 RR42_RS13385 b29b15747715eca8d1fb1116ae143552 626 PANTHER PTHR30290:SF2 405 626 1.1E-165 T 23-04-2016 RR42_RS13385 b29b15747715eca8d1fb1116ae143552 626 Gene3D G3DSA:3.10.105.10 416 585 5.9E-49 T 23-04-2016 RR42_RS13385 b29b15747715eca8d1fb1116ae143552 626 Gene3D G3DSA:3.10.105.10 340 378 5.9E-49 T 23-04-2016 RR42_RS13385 b29b15747715eca8d1fb1116ae143552 626 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 119 529 2.6E-80 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain RR42_RS12145 620b5c0adaba0eb5c1939d4e4d4134ba 1013 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 2.2E-7 T 23-04-2016 IPR024973 ESPR domain RR42_RS12145 620b5c0adaba0eb5c1939d4e4d4134ba 1013 Gene3D G3DSA:2.160.20.10 84 342 4.6E-21 T 23-04-2016 IPR012334 Pectin lyase fold RR42_RS12145 620b5c0adaba0eb5c1939d4e4d4134ba 1013 SUPERFAMILY SSF51126 45 339 5.96E-49 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor RR42_RS12145 620b5c0adaba0eb5c1939d4e4d4134ba 1013 SMART SM00912 51 165 1.9E-45 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal RR42_RS12145 620b5c0adaba0eb5c1939d4e4d4134ba 1013 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 87 162 1.9E-25 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal RR42_RS12145 620b5c0adaba0eb5c1939d4e4d4134ba 1013 Pfam PF05860 haemagglutination activity domain 62 164 9.3E-25 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal RR42_RS12145 620b5c0adaba0eb5c1939d4e4d4134ba 1013 PANTHER PTHR12338 776 1012 2.6E-108 T 23-04-2016 RR42_RS12145 620b5c0adaba0eb5c1939d4e4d4134ba 1013 PANTHER PTHR12338 1 759 2.6E-108 T 23-04-2016 RR42_RS04095 736d31ffcd2fa972da57ccb5a8015996 325 PANTHER PTHR35007:SF1 125 325 3.0E-63 T 23-04-2016 RR42_RS04095 736d31ffcd2fa972da57ccb5a8015996 325 Pfam PF00482 Type II secretion system (T2SS), protein F 158 283 3.1E-18 T 23-04-2016 IPR018076 Type II secretion system F domain RR42_RS04095 736d31ffcd2fa972da57ccb5a8015996 325 PANTHER PTHR35007 125 325 3.0E-63 T 23-04-2016 RR42_RS37615 9bc2e4cd8fb02fc49c9aceeea5d45e70 321 SMART SM00530 38 95 0.0035 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RR42_RS37615 9bc2e4cd8fb02fc49c9aceeea5d45e70 321 Gene3D G3DSA:1.10.260.40 40 96 3.2E-7 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS37615 9bc2e4cd8fb02fc49c9aceeea5d45e70 321 SUPERFAMILY SSF47413 37 96 5.94E-7 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS37615 9bc2e4cd8fb02fc49c9aceeea5d45e70 321 Pfam PF01381 Helix-turn-helix 45 75 3.7E-6 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RR42_RS19575 c0e2120c2fc2c5dfafe8b945de247d11 204 SUPERFAMILY SSF109604 9 136 4.81E-30 T 23-04-2016 RR42_RS19575 c0e2120c2fc2c5dfafe8b945de247d11 204 Pfam PF01966 HD domain 59 120 1.7E-5 T 23-04-2016 IPR006674 HD domain RR42_RS19575 c0e2120c2fc2c5dfafe8b945de247d11 204 PANTHER PTHR40202 23 197 1.2E-22 T 23-04-2016 RR42_RS19575 c0e2120c2fc2c5dfafe8b945de247d11 204 PANTHER PTHR40202:SF1 23 197 1.2E-22 T 23-04-2016 RR42_RS20030 e468f85ac08440347f6702a930f9b7cb 380 Gene3D G3DSA:3.40.50.2300 41 235 1.2E-12 T 23-04-2016 RR42_RS20030 e468f85ac08440347f6702a930f9b7cb 380 SUPERFAMILY SSF53822 41 349 1.27E-24 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RR42_RS20030 e468f85ac08440347f6702a930f9b7cb 380 Pfam PF13458 Periplasmic binding protein 42 348 9.4E-22 T 23-04-2016 IPR028081 Leucine-binding protein domain RR42_RS11370 38d43f9cadf25417afc997049636948d 536 PANTHER PTHR19211 2 532 0.0 T 23-04-2016 RR42_RS11370 38d43f9cadf25417afc997049636948d 536 Gene3D G3DSA:3.40.50.300 319 533 1.1E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11370 38d43f9cadf25417afc997049636948d 536 Gene3D G3DSA:3.40.50.300 2 270 4.1E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11370 38d43f9cadf25417afc997049636948d 536 Pfam PF00005 ABC transporter 18 184 9.2E-20 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS11370 38d43f9cadf25417afc997049636948d 536 Pfam PF00005 ABC transporter 335 471 1.5E-19 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS11370 38d43f9cadf25417afc997049636948d 536 Pfam PF12848 ABC transporter 224 309 5.9E-22 T 23-04-2016 IPR032781 ABC-transporter extension domain RR42_RS11370 38d43f9cadf25417afc997049636948d 536 SUPERFAMILY SSF52540 296 528 2.97E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11370 38d43f9cadf25417afc997049636948d 536 SUPERFAMILY SSF52540 6 237 4.06E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11370 38d43f9cadf25417afc997049636948d 536 SMART SM00382 343 516 8.0E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS11370 38d43f9cadf25417afc997049636948d 536 SMART SM00382 26 238 1.4E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS11370 38d43f9cadf25417afc997049636948d 536 PANTHER PTHR19211:SF38 2 532 0.0 T 23-04-2016 RR42_RS07320 df6917f0f729ff63745520d5fc9d0c7b 149 PANTHER PTHR33164 8 145 2.0E-38 T 23-04-2016 RR42_RS07320 df6917f0f729ff63745520d5fc9d0c7b 149 PANTHER PTHR33164:SF13 8 145 2.0E-38 T 23-04-2016 RR42_RS07320 df6917f0f729ff63745520d5fc9d0c7b 149 SUPERFAMILY SSF46785 6 143 1.65E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS07320 df6917f0f729ff63745520d5fc9d0c7b 149 TIGRFAM TIGR02337 HpaR: homoprotocatechuate degradation operon regulator, HpaR 10 138 1.5E-50 T 23-04-2016 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR GO:0003677|GO:0010124|GO:0045892 RR42_RS07320 df6917f0f729ff63745520d5fc9d0c7b 149 Pfam PF01047 MarR family 36 91 7.7E-14 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS07320 df6917f0f729ff63745520d5fc9d0c7b 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 5.9E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS07320 df6917f0f729ff63745520d5fc9d0c7b 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 5.9E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS07320 df6917f0f729ff63745520d5fc9d0c7b 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 5.9E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS07320 df6917f0f729ff63745520d5fc9d0c7b 149 Gene3D G3DSA:1.10.10.10 6 144 7.8E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS07320 df6917f0f729ff63745520d5fc9d0c7b 149 SMART SM00347 28 128 4.9E-23 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS17690 914f284c9d9e7b0872ad3225ecfd07f3 149 Gene3D G3DSA:3.40.50.9100 1 138 8.6E-67 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RR42_RS17690 914f284c9d9e7b0872ad3225ecfd07f3 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 4 21 - T 23-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RR42_RS17690 914f284c9d9e7b0872ad3225ecfd07f3 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 73.403 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RR42_RS17690 914f284c9d9e7b0872ad3225ecfd07f3 149 PANTHER PTHR21272 1 147 1.1E-89 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RR42_RS17690 914f284c9d9e7b0872ad3225ecfd07f3 149 PIRSF PIRSF001399 1 144 8.1E-59 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RR42_RS17690 914f284c9d9e7b0872ad3225ecfd07f3 149 SUPERFAMILY SSF52304 1 139 3.53E-63 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RR42_RS17690 914f284c9d9e7b0872ad3225ecfd07f3 149 Pfam PF01220 Dehydroquinase class II 1 137 8.8E-61 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RR42_RS17690 914f284c9d9e7b0872ad3225ecfd07f3 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 1 141 1.0E-66 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RR42_RS17690 914f284c9d9e7b0872ad3225ecfd07f3 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 1 138 1.1E-61 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RR42_RS05880 979a9c423ec5dfa49ebad8e29300787e 285 Gene3D G3DSA:3.60.110.10 16 283 2.6E-82 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RR42_RS05880 979a9c423ec5dfa49ebad8e29300787e 285 PANTHER PTHR23088 3 283 7.9E-96 T 23-04-2016 RR42_RS05880 979a9c423ec5dfa49ebad8e29300787e 285 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 167 187 - T 23-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site RR42_RS05880 979a9c423ec5dfa49ebad8e29300787e 285 Pfam PF00795 Carbon-nitrogen hydrolase 20 275 1.1E-54 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RR42_RS05880 979a9c423ec5dfa49ebad8e29300787e 285 SUPERFAMILY SSF56317 17 283 3.79E-81 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RR42_RS05880 979a9c423ec5dfa49ebad8e29300787e 285 PANTHER PTHR23088:SF27 3 283 7.9E-96 T 23-04-2016 RR42_RS00335 5da8a21b5edab19099d83aa94af9be02 263 PANTHER PTHR32145 1 252 1.1E-70 T 23-04-2016 RR42_RS00335 5da8a21b5edab19099d83aa94af9be02 263 Pfam PF00753 Metallo-beta-lactamase superfamily 27 221 2.6E-21 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS00335 5da8a21b5edab19099d83aa94af9be02 263 SUPERFAMILY SSF56281 28 241 7.47E-31 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS00335 5da8a21b5edab19099d83aa94af9be02 263 SMART SM00849 29 221 3.3E-12 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS00335 5da8a21b5edab19099d83aa94af9be02 263 Gene3D G3DSA:3.60.15.10 4 241 1.4E-49 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS00335 5da8a21b5edab19099d83aa94af9be02 263 PANTHER PTHR32145:SF7 1 252 1.1E-70 T 23-04-2016 RR42_RS04045 1c09997a671abdd106eea2c9b6c182af 202 SMART SM00702 14 198 8.9E-19 T 23-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 RR42_RS04045 1c09997a671abdd106eea2c9b6c182af 202 PANTHER PTHR12907 2 198 3.4E-37 T 23-04-2016 RR42_RS04045 1c09997a671abdd106eea2c9b6c182af 202 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 106 198 8.5E-22 T 23-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 RR42_RS04045 1c09997a671abdd106eea2c9b6c182af 202 PANTHER PTHR12907:SF14 2 198 3.4E-37 T 23-04-2016 RR42_RS03265 e3ca591b1ce2553f46cb60666aa621e7 426 Gene3D G3DSA:3.50.50.60 1 183 4.1E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS03265 e3ca591b1ce2553f46cb60666aa621e7 426 Gene3D G3DSA:3.50.50.60 289 369 4.1E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS03265 e3ca591b1ce2553f46cb60666aa621e7 426 PANTHER PTHR13789:SF241 2 417 2.1E-107 T 23-04-2016 RR42_RS03265 e3ca591b1ce2553f46cb60666aa621e7 426 SUPERFAMILY SSF54373 184 293 1.29E-30 T 23-04-2016 RR42_RS03265 e3ca591b1ce2553f46cb60666aa621e7 426 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 7.7E-18 T 23-04-2016 RR42_RS03265 e3ca591b1ce2553f46cb60666aa621e7 426 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 317 333 7.7E-18 T 23-04-2016 RR42_RS03265 e3ca591b1ce2553f46cb60666aa621e7 426 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 7.7E-18 T 23-04-2016 RR42_RS03265 e3ca591b1ce2553f46cb60666aa621e7 426 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 317 7.7E-18 T 23-04-2016 RR42_RS03265 e3ca591b1ce2553f46cb60666aa621e7 426 PANTHER PTHR13789 2 417 2.1E-107 T 23-04-2016 RR42_RS03265 e3ca591b1ce2553f46cb60666aa621e7 426 Pfam PF01494 FAD binding domain 2 368 2.0E-22 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 RR42_RS03265 e3ca591b1ce2553f46cb60666aa621e7 426 SUPERFAMILY SSF51905 289 378 2.85E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS03265 e3ca591b1ce2553f46cb60666aa621e7 426 SUPERFAMILY SSF51905 1 178 2.85E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS00990 a159930d5e8eadcdd17aa06949e8df7c 245 PANTHER PTHR11751:SF333 1 81 1.3E-21 T 23-04-2016 RR42_RS00990 a159930d5e8eadcdd17aa06949e8df7c 245 PANTHER PTHR11751:SF333 127 146 1.3E-21 T 23-04-2016 RR42_RS00990 a159930d5e8eadcdd17aa06949e8df7c 245 SUPERFAMILY SSF64288 62 234 1.88E-36 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RR42_RS00990 a159930d5e8eadcdd17aa06949e8df7c 245 SMART SM00345 15 74 9.1E-21 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS00990 a159930d5e8eadcdd17aa06949e8df7c 245 Gene3D G3DSA:3.40.1410.10 72 235 3.5E-32 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RR42_RS00990 a159930d5e8eadcdd17aa06949e8df7c 245 SMART SM00866 95 232 2.3E-19 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RR42_RS00990 a159930d5e8eadcdd17aa06949e8df7c 245 Pfam PF07702 UTRA domain 96 232 3.0E-20 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RR42_RS00990 a159930d5e8eadcdd17aa06949e8df7c 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.1E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS00990 a159930d5e8eadcdd17aa06949e8df7c 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.1E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS00990 a159930d5e8eadcdd17aa06949e8df7c 245 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 74 2.2E-22 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS00990 a159930d5e8eadcdd17aa06949e8df7c 245 SUPERFAMILY SSF46785 7 78 6.59E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS00990 a159930d5e8eadcdd17aa06949e8df7c 245 PANTHER PTHR11751 1 81 1.3E-21 T 23-04-2016 RR42_RS00990 a159930d5e8eadcdd17aa06949e8df7c 245 PANTHER PTHR11751 127 146 1.3E-21 T 23-04-2016 RR42_RS00990 a159930d5e8eadcdd17aa06949e8df7c 245 Gene3D G3DSA:1.10.10.10 5 71 1.4E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS13370 862cc0bbb1954f34eb33c8b410ebfca8 560 Gene3D G3DSA:3.40.50.300 281 535 1.1E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13370 862cc0bbb1954f34eb33c8b410ebfca8 560 Gene3D G3DSA:3.40.50.300 15 265 1.0E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13370 862cc0bbb1954f34eb33c8b410ebfca8 560 SUPERFAMILY SSF52540 15 262 5.08E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13370 862cc0bbb1954f34eb33c8b410ebfca8 560 SUPERFAMILY SSF52540 301 534 1.09E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13370 862cc0bbb1954f34eb33c8b410ebfca8 560 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS13370 862cc0bbb1954f34eb33c8b410ebfca8 560 ProSitePatterns PS00211 ABC transporters family signature. 435 449 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS13370 862cc0bbb1954f34eb33c8b410ebfca8 560 PANTHER PTHR24220:SF574 16 420 1.5E-164 T 23-04-2016 RR42_RS13370 862cc0bbb1954f34eb33c8b410ebfca8 560 Pfam PF00005 ABC transporter 310 463 2.3E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS13370 862cc0bbb1954f34eb33c8b410ebfca8 560 Pfam PF00005 ABC transporter 35 190 8.0E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS13370 862cc0bbb1954f34eb33c8b410ebfca8 560 SMART SM00382 319 512 3.6E-18 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS13370 862cc0bbb1954f34eb33c8b410ebfca8 560 SMART SM00382 43 240 1.1E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS13370 862cc0bbb1954f34eb33c8b410ebfca8 560 PANTHER PTHR24220 16 420 1.5E-164 T 23-04-2016 RR42_RS13370 862cc0bbb1954f34eb33c8b410ebfca8 560 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 514 537 0.027 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RR42_RS13370 862cc0bbb1954f34eb33c8b410ebfca8 560 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 268 4.4E-6 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RR42_RS15285 6019e53132ad97fdbccc2331eda58fa1 281 PANTHER PTHR10438 1 108 2.1E-34 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RR42_RS15285 6019e53132ad97fdbccc2331eda58fa1 281 SUPERFAMILY SSF52833 3 107 1.51E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS15285 6019e53132ad97fdbccc2331eda58fa1 281 Pfam PF00085 Thioredoxin 4 103 6.6E-26 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 RR42_RS15285 6019e53132ad97fdbccc2331eda58fa1 281 Gene3D G3DSA:3.40.30.10 3 104 7.8E-32 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS15285 6019e53132ad97fdbccc2331eda58fa1 281 SUPERFAMILY SSF48452 193 278 2.66E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS15285 6019e53132ad97fdbccc2331eda58fa1 281 SUPERFAMILY SSF48452 107 144 2.66E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS15285 6019e53132ad97fdbccc2331eda58fa1 281 PRINTS PR00421 Thioredoxin family signature 70 81 1.0E-5 T 23-04-2016 RR42_RS15285 6019e53132ad97fdbccc2331eda58fa1 281 PRINTS PR00421 Thioredoxin family signature 30 39 1.0E-5 T 23-04-2016 RR42_RS15285 6019e53132ad97fdbccc2331eda58fa1 281 PRINTS PR00421 Thioredoxin family signature 22 30 1.0E-5 T 23-04-2016 RR42_RS15285 6019e53132ad97fdbccc2331eda58fa1 281 ProSitePatterns PS00194 Thioredoxin family active site. 23 41 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RR42_RS15285 6019e53132ad97fdbccc2331eda58fa1 281 Pfam PF14561 Tetratricopeptide repeat 193 280 1.7E-22 T 23-04-2016 RR42_RS15285 6019e53132ad97fdbccc2331eda58fa1 281 Gene3D G3DSA:1.25.40.10 195 280 8.1E-26 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS15285 6019e53132ad97fdbccc2331eda58fa1 281 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 104 3.0E-31 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RR42_RS00540 6d575947d205286efed920b09c7f188d 884 PANTHER PTHR34595 18 883 8.1E-206 T 23-04-2016 RR42_RS00540 6d575947d205286efed920b09c7f188d 884 Pfam PF14403 Circularly permuted ATP-grasp type 2 99 492 3.5E-143 T 23-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 RR42_RS00540 6d575947d205286efed920b09c7f188d 884 SUPERFAMILY SSF56059 77 258 6.71E-16 T 23-04-2016 RR42_RS00540 6d575947d205286efed920b09c7f188d 884 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 544 870 5.1E-55 T 23-04-2016 IPR007296 Domain of unknown function DUF403 RR42_RS00540 6d575947d205286efed920b09c7f188d 884 PANTHER PTHR34595:SF1 18 883 8.1E-206 T 23-04-2016 RR42_RS05280 132873d62cbf213a896990a23eb6466d 205 SUPERFAMILY SSF46626 33 112 3.0E-16 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS05280 132873d62cbf213a896990a23eb6466d 205 Pfam PF00034 Cytochrome c 41 110 3.5E-4 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS05280 132873d62cbf213a896990a23eb6466d 205 Gene3D G3DSA:1.10.760.10 35 112 2.9E-22 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS05280 132873d62cbf213a896990a23eb6466d 205 PRINTS PR00605 Class IC cytochrome C signature 45 56 4.6E-5 T 23-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 RR42_RS05280 132873d62cbf213a896990a23eb6466d 205 PRINTS PR00605 Class IC cytochrome C signature 179 201 4.6E-5 T 23-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 RR42_RS05280 132873d62cbf213a896990a23eb6466d 205 PANTHER PTHR33751 32 205 8.5E-38 T 23-04-2016 RR42_RS05280 132873d62cbf213a896990a23eb6466d 205 PIRSF PIRSF000005 8 205 2.6E-45 T 23-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 RR42_RS05280 132873d62cbf213a896990a23eb6466d 205 PANTHER PTHR33751:SF3 32 205 8.5E-38 T 23-04-2016 RR42_RS05280 132873d62cbf213a896990a23eb6466d 205 Gene3D G3DSA:1.10.760.10 118 204 8.2E-22 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS05280 132873d62cbf213a896990a23eb6466d 205 SUPERFAMILY SSF46626 121 204 2.29E-16 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS16865 2a15a31941f3b891b7a74da586310586 162 Pfam PF12019 Type II transport protein GspH 53 152 7.1E-12 T 23-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RR42_RS16865 2a15a31941f3b891b7a74da586310586 162 Pfam PF13633 Prokaryotic N-terminal methylation site 15 41 1.4E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS16865 2a15a31941f3b891b7a74da586310586 162 Gene3D G3DSA:3.30.700.10 18 112 1.1E-5 T 23-04-2016 RR42_RS16865 2a15a31941f3b891b7a74da586310586 162 SUPERFAMILY SSF54523 18 98 2.2E-13 T 23-04-2016 RR42_RS16865 2a15a31941f3b891b7a74da586310586 162 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 38 1.7E-8 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS16865 2a15a31941f3b891b7a74da586310586 162 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 16 36 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS04910 99fdfc755f5774500d82d5f13a0f362e 217 SUPERFAMILY SSF52540 14 199 3.09E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04910 99fdfc755f5774500d82d5f13a0f362e 217 Hamap MF_00328 Guanylate kinase [gmk]. 14 197 35.213 T 23-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 RR42_RS04910 99fdfc755f5774500d82d5f13a0f362e 217 ProSitePatterns PS00856 Guanylate kinase-like signature. 50 67 - T 23-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 RR42_RS04910 99fdfc755f5774500d82d5f13a0f362e 217 PANTHER PTHR23117 1 216 9.2E-87 T 23-04-2016 RR42_RS04910 99fdfc755f5774500d82d5f13a0f362e 217 Gene3D G3DSA:3.30.63.10 57 97 2.2E-27 T 23-04-2016 RR42_RS04910 99fdfc755f5774500d82d5f13a0f362e 217 Pfam PF00625 Guanylate kinase 18 195 8.0E-48 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RR42_RS04910 99fdfc755f5774500d82d5f13a0f362e 217 Gene3D G3DSA:3.40.50.300 30 56 5.2E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04910 99fdfc755f5774500d82d5f13a0f362e 217 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 16 194 1.7E-71 T 23-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 RR42_RS04910 99fdfc755f5774500d82d5f13a0f362e 217 SMART SM00072 15 197 4.5E-59 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RR42_RS04910 99fdfc755f5774500d82d5f13a0f362e 217 Gene3D G3DSA:3.40.50.300 98 210 9.1E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04910 99fdfc755f5774500d82d5f13a0f362e 217 Gene3D G3DSA:3.40.50.300 14 29 9.1E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04910 99fdfc755f5774500d82d5f13a0f362e 217 PANTHER PTHR23117:SF13 1 216 9.2E-87 T 23-04-2016 RR42_RS06415 d96c9fc24ba52a499ea084027ba10b40 162 Gene3D G3DSA:3.10.180.10 1 137 3.7E-25 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS06415 d96c9fc24ba52a499ea084027ba10b40 162 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 135 9.2E-11 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RR42_RS06415 d96c9fc24ba52a499ea084027ba10b40 162 SUPERFAMILY SSF54593 1 143 1.14E-23 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS20475 d9e5b08ef5eeae6e1882138aed97ccbc 390 PANTHER PTHR34700 42 386 3.3E-44 T 23-04-2016 RR42_RS20475 d9e5b08ef5eeae6e1882138aed97ccbc 390 Pfam PF01476 LysM domain 73 118 1.8E-9 T 23-04-2016 IPR018392 LysM domain RR42_RS20475 d9e5b08ef5eeae6e1882138aed97ccbc 390 PANTHER PTHR34700:SF2 42 386 3.3E-44 T 23-04-2016 RR42_RS20475 d9e5b08ef5eeae6e1882138aed97ccbc 390 Gene3D G3DSA:3.10.350.10 71 120 8.5E-7 T 23-04-2016 IPR018392 LysM domain RR42_RS20475 d9e5b08ef5eeae6e1882138aed97ccbc 390 SUPERFAMILY SSF54106 71 120 2.22E-7 T 23-04-2016 IPR018392 LysM domain RR42_RS10270 5e103f2df01a1735e176675ace8df3d1 257 PANTHER PTHR11941:SF17 3 253 1.6E-69 T 23-04-2016 RR42_RS10270 5e103f2df01a1735e176675ace8df3d1 257 SUPERFAMILY SSF52096 2 248 2.09E-69 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS10270 5e103f2df01a1735e176675ace8df3d1 257 Gene3D G3DSA:3.90.226.10 3 249 3.9E-68 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS10270 5e103f2df01a1735e176675ace8df3d1 257 PANTHER PTHR11941 3 253 1.6E-69 T 23-04-2016 RR42_RS10270 5e103f2df01a1735e176675ace8df3d1 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 250 1.3E-46 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RR42_RS00715 43eceb969ea6db42445fec3109c3ff7e 287 Gene3D G3DSA:1.10.620.20 12 184 5.3E-25 T 23-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 RR42_RS00715 43eceb969ea6db42445fec3109c3ff7e 287 SUPERFAMILY SSF47240 5 274 9.8E-51 T 23-04-2016 IPR009078 Ferritin-like superfamily RR42_RS15335 4290a15f3619a1792e0c7daed07a53ce 180 Gene3D G3DSA:3.30.1060.10 3 159 1.0E-71 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RR42_RS15335 4290a15f3619a1792e0c7daed07a53ce 180 PANTHER PTHR10173 3 159 1.5E-81 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 RR42_RS15335 4290a15f3619a1792e0c7daed07a53ce 180 SUPERFAMILY SSF55068 3 171 1.44E-72 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RR42_RS15335 4290a15f3619a1792e0c7daed07a53ce 180 PANTHER PTHR10173:SF34 3 159 1.5E-81 T 23-04-2016 RR42_RS15335 4290a15f3619a1792e0c7daed07a53ce 180 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 6 159 8.0E-58 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RR42_RS15335 4290a15f3619a1792e0c7daed07a53ce 180 Pfam PF01625 Peptide methionine sulfoxide reductase 8 160 3.7E-64 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RR42_RS15335 4290a15f3619a1792e0c7daed07a53ce 180 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 5 164 36.072 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RR42_RS09165 a9aee20de9416f23b5bd54dccbcc5090 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 219 2.9E-23 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS09165 a9aee20de9416f23b5bd54dccbcc5090 223 SMART SM00448 1 111 2.5E-41 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS09165 a9aee20de9416f23b5bd54dccbcc5090 223 PANTHER PTHR26402:SF575 1 217 8.6E-102 T 23-04-2016 RR42_RS09165 a9aee20de9416f23b5bd54dccbcc5090 223 Pfam PF00072 Response regulator receiver domain 3 111 4.1E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS09165 a9aee20de9416f23b5bd54dccbcc5090 223 SUPERFAMILY SSF52172 1 177 3.56E-41 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS09165 a9aee20de9416f23b5bd54dccbcc5090 223 PANTHER PTHR26402 1 217 8.6E-102 T 23-04-2016 RR42_RS09165 a9aee20de9416f23b5bd54dccbcc5090 223 SMART SM00862 144 219 1.8E-20 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS09165 a9aee20de9416f23b5bd54dccbcc5090 223 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 219 2.8E-100 T 23-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 RR42_RS09165 a9aee20de9416f23b5bd54dccbcc5090 223 Gene3D G3DSA:1.10.10.10 122 219 5.2E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS09165 a9aee20de9416f23b5bd54dccbcc5090 223 Gene3D G3DSA:3.40.50.2300 1 118 1.3E-39 T 23-04-2016 RR42_RS16895 78939a73fe11f35001e2c31eb4a401fd 271 Gene3D G3DSA:3.40.630.40 5 268 8.3E-93 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RR42_RS16895 78939a73fe11f35001e2c31eb4a401fd 271 SUPERFAMILY SSF53187 9 267 3.04E-82 T 23-04-2016 RR42_RS16895 78939a73fe11f35001e2c31eb4a401fd 271 Pfam PF05013 N-formylglutamate amidohydrolase 18 237 6.6E-69 T 23-04-2016 IPR007709 N-formylglutamate amidohydrolase RR42_RS16895 78939a73fe11f35001e2c31eb4a401fd 271 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 10 268 8.3E-108 T 23-04-2016 IPR010247 N-formylglutamate deformylase RR42_RS05695 3dfdb209d1bf41090a1bce960aaa4fed 339 SUPERFAMILY SSF53686 18 325 1.11E-83 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RR42_RS05695 3dfdb209d1bf41090a1bce960aaa4fed 339 Gene3D G3DSA:3.40.50.1100 84 330 3.6E-71 T 23-04-2016 RR42_RS05695 3dfdb209d1bf41090a1bce960aaa4fed 339 PANTHER PTHR10314:SF17 18 330 3.0E-94 T 23-04-2016 RR42_RS05695 3dfdb209d1bf41090a1bce960aaa4fed 339 PANTHER PTHR10314 18 330 3.0E-94 T 23-04-2016 RR42_RS05695 3dfdb209d1bf41090a1bce960aaa4fed 339 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 32 318 4.3E-71 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RR42_RS12860 987d3c74c1a6fab30eeafa962b5d42a4 638 Pfam PF01479 S4 domain 249 291 1.9E-6 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RR42_RS12860 987d3c74c1a6fab30eeafa962b5d42a4 638 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 348 362 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 RR42_RS12860 987d3c74c1a6fab30eeafa962b5d42a4 638 Pfam PF00849 RNA pseudouridylate synthase 310 442 4.3E-13 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS12860 987d3c74c1a6fab30eeafa962b5d42a4 638 SMART SM00363 247 308 1.6E-8 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RR42_RS12860 987d3c74c1a6fab30eeafa962b5d42a4 638 PANTHER PTHR21600:SF2 248 483 6.1E-77 T 23-04-2016 RR42_RS12860 987d3c74c1a6fab30eeafa962b5d42a4 638 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 314 474 2.0E-48 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RR42_RS12860 987d3c74c1a6fab30eeafa962b5d42a4 638 PANTHER PTHR21600 248 483 6.1E-77 T 23-04-2016 RR42_RS12860 987d3c74c1a6fab30eeafa962b5d42a4 638 SUPERFAMILY SSF55120 308 478 7.36E-39 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS12860 987d3c74c1a6fab30eeafa962b5d42a4 638 SUPERFAMILY SSF55174 249 337 3.79E-13 T 23-04-2016 RR42_RS12860 987d3c74c1a6fab30eeafa962b5d42a4 638 Gene3D G3DSA:3.10.290.10 249 301 5.8E-14 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RR42_RS19200 c7428da9542cd9eb0a2542dc8996cf01 102 Gene3D G3DSA:2.30.30.30 3 89 2.5E-19 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 RR42_RS19200 c7428da9542cd9eb0a2542dc8996cf01 102 SMART SM00739 3 30 3.7E-4 T 23-04-2016 IPR005824 KOW RR42_RS19200 c7428da9542cd9eb0a2542dc8996cf01 102 PANTHER PTHR12903 3 100 4.8E-37 T 23-04-2016 RR42_RS19200 c7428da9542cd9eb0a2542dc8996cf01 102 SUPERFAMILY SSF50104 3 98 1.26E-27 T 23-04-2016 IPR008991 Translation protein SH3-like domain RR42_RS19200 c7428da9542cd9eb0a2542dc8996cf01 102 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 99 1.8E-31 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19200 c7428da9542cd9eb0a2542dc8996cf01 102 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 23-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19200 c7428da9542cd9eb0a2542dc8996cf01 102 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 37 99 7.1E-22 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19200 c7428da9542cd9eb0a2542dc8996cf01 102 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 94 19.471 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS16670 4b701fc3d7a2fef7515b0aeffabc91f2 122 Gene3D G3DSA:1.10.760.10 20 120 4.4E-35 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS16670 4b701fc3d7a2fef7515b0aeffabc91f2 122 PANTHER PTHR11961:SF6 21 118 7.5E-29 T 23-04-2016 RR42_RS16670 4b701fc3d7a2fef7515b0aeffabc91f2 122 Pfam PF00034 Cytochrome c 23 119 6.4E-9 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS16670 4b701fc3d7a2fef7515b0aeffabc91f2 122 PRINTS PR00604 Class IA and IB cytochrome C signature 76 92 4.5E-18 T 23-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 RR42_RS16670 4b701fc3d7a2fef7515b0aeffabc91f2 122 PRINTS PR00604 Class IA and IB cytochrome C signature 46 61 4.5E-18 T 23-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 RR42_RS16670 4b701fc3d7a2fef7515b0aeffabc91f2 122 PRINTS PR00604 Class IA and IB cytochrome C signature 112 120 4.5E-18 T 23-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 RR42_RS16670 4b701fc3d7a2fef7515b0aeffabc91f2 122 PRINTS PR00604 Class IA and IB cytochrome C signature 95 105 4.5E-18 T 23-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 RR42_RS16670 4b701fc3d7a2fef7515b0aeffabc91f2 122 PRINTS PR00604 Class IA and IB cytochrome C signature 33 40 4.5E-18 T 23-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 RR42_RS16670 4b701fc3d7a2fef7515b0aeffabc91f2 122 PANTHER PTHR11961 21 118 7.5E-29 T 23-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 RR42_RS16670 4b701fc3d7a2fef7515b0aeffabc91f2 122 SUPERFAMILY SSF46626 20 120 2.54E-30 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS05000 4e727384f89b673929c82e680760ce42 540 SUPERFAMILY SSF51905 482 531 2.2E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS05000 4e727384f89b673929c82e680760ce42 540 SUPERFAMILY SSF51905 104 290 2.2E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS05000 4e727384f89b673929c82e680760ce42 540 PIRSF PIRSF038984 1 538 4.5E-241 T 23-04-2016 IPR028348 FAD dependent protein RR42_RS05000 4e727384f89b673929c82e680760ce42 540 Pfam PF01593 Flavin containing amine oxidoreductase 215 270 5.7E-5 T 23-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 RR42_RS05000 4e727384f89b673929c82e680760ce42 540 Gene3D G3DSA:3.50.50.60 104 292 7.6E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS05000 4e727384f89b673929c82e680760ce42 540 Gene3D G3DSA:3.50.50.60 456 532 7.6E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS05000 4e727384f89b673929c82e680760ce42 540 PANTHER PTHR10617 75 393 3.7E-163 T 23-04-2016 RR42_RS05000 4e727384f89b673929c82e680760ce42 540 PANTHER PTHR10617 473 537 3.7E-163 T 23-04-2016 RR42_RS05000 4e727384f89b673929c82e680760ce42 540 PANTHER PTHR10617:SF52 75 393 3.7E-163 T 23-04-2016 RR42_RS05000 4e727384f89b673929c82e680760ce42 540 PANTHER PTHR10617:SF52 473 537 3.7E-163 T 23-04-2016 RR42_RS01360 72065f3b93c11f237a7b60695d50a672 148 Gene3D G3DSA:3.10.129.10 24 141 2.2E-32 T 23-04-2016 IPR029069 HotDog domain RR42_RS01360 72065f3b93c11f237a7b60695d50a672 148 PANTHER PTHR12418 15 138 9.3E-22 T 23-04-2016 RR42_RS01360 72065f3b93c11f237a7b60695d50a672 148 SUPERFAMILY SSF54637 21 143 1.46E-31 T 23-04-2016 IPR029069 HotDog domain RR42_RS01360 72065f3b93c11f237a7b60695d50a672 148 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 26 137 4.1E-17 T 23-04-2016 IPR003736 Phenylacetic acid degradation-related domain RR42_RS01360 72065f3b93c11f237a7b60695d50a672 148 Pfam PF03061 Thioesterase superfamily 57 132 2.6E-12 T 23-04-2016 IPR006683 Thioesterase domain RR42_RS05630 00b8f062c45d4c18584b21fad3590d91 421 PANTHER PTHR30483:SF8 6 421 6.3E-213 T 23-04-2016 RR42_RS05630 00b8f062c45d4c18584b21fad3590d91 421 Gene3D G3DSA:3.40.50.2300 150 349 1.0E-76 T 23-04-2016 RR42_RS05630 00b8f062c45d4c18584b21fad3590d91 421 SUPERFAMILY SSF53822 34 411 2.36E-94 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RR42_RS05630 00b8f062c45d4c18584b21fad3590d91 421 PANTHER PTHR30483 6 421 6.3E-213 T 23-04-2016 RR42_RS05630 00b8f062c45d4c18584b21fad3590d91 421 Pfam PF13433 Periplasmic binding protein domain 35 409 7.4E-175 T 23-04-2016 RR42_RS05630 00b8f062c45d4c18584b21fad3590d91 421 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 35 407 2.0E-181 T 23-04-2016 IPR017777 ABC transporter, urea, substrate-binding, UrtA RR42_RS08640 3785f14c7a210b3ef9aa0a5f7d8ee980 335 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 8 333 3.3E-110 T 23-04-2016 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 RR42_RS08640 3785f14c7a210b3ef9aa0a5f7d8ee980 335 Pfam PF05125 Phage major capsid protein, P2 family 9 331 5.4E-148 T 23-04-2016 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 RR42_RS17025 abc473786f60e2e5f9b436647df801fc 396 PANTHER PTHR11351 17 382 2.0E-137 T 23-04-2016 RR42_RS17025 abc473786f60e2e5f9b436647df801fc 396 Pfam PF01610 Transposase 273 395 1.4E-8 T 23-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RR42_RS17025 abc473786f60e2e5f9b436647df801fc 396 Pfam PF00487 Fatty acid desaturase 18 241 4.7E-16 T 23-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 RR42_RS17025 abc473786f60e2e5f9b436647df801fc 396 PANTHER PTHR11351:SF33 17 382 2.0E-137 T 23-04-2016 RR42_RS17025 abc473786f60e2e5f9b436647df801fc 396 PRINTS PR00075 Fatty acid desaturase family 1 signature 41 61 3.4E-5 T 23-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 RR42_RS17025 abc473786f60e2e5f9b436647df801fc 396 PRINTS PR00075 Fatty acid desaturase family 1 signature 166 187 3.4E-5 T 23-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 RR42_RS17025 abc473786f60e2e5f9b436647df801fc 396 PRINTS PR00075 Fatty acid desaturase family 1 signature 209 223 3.4E-5 T 23-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 RR42_RS17025 abc473786f60e2e5f9b436647df801fc 396 PRINTS PR00075 Fatty acid desaturase family 1 signature 78 107 3.4E-5 T 23-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 RR42_RS10890 4460a75780ed8a0a68e85d09bbdef2d0 173 PANTHER PTHR23091 5 173 5.6E-27 T 23-04-2016 RR42_RS10890 4460a75780ed8a0a68e85d09bbdef2d0 173 Gene3D G3DSA:3.40.630.30 6 170 2.3E-38 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS10890 4460a75780ed8a0a68e85d09bbdef2d0 173 SUPERFAMILY SSF55729 7 169 2.23E-30 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS10890 4460a75780ed8a0a68e85d09bbdef2d0 173 PANTHER PTHR23091:SF187 5 173 5.6E-27 T 23-04-2016 RR42_RS10890 4460a75780ed8a0a68e85d09bbdef2d0 173 Pfam PF13420 Acetyltransferase (GNAT) domain 8 148 3.4E-14 T 23-04-2016 RR42_RS02435 1435075c42001302c8792d77042b096e 119 SMART SM00834 1 43 3.3E-17 T 23-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RR42_RS02435 1435075c42001302c8792d77042b096e 119 PANTHER PTHR34404:SF2 2 91 9.9E-18 T 23-04-2016 RR42_RS02435 1435075c42001302c8792d77042b096e 119 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 53 8.9E-20 T 23-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RR42_RS02435 1435075c42001302c8792d77042b096e 119 PANTHER PTHR34404 2 91 9.9E-18 T 23-04-2016 RR42_RS02435 1435075c42001302c8792d77042b096e 119 Pfam PF09723 Zinc ribbon domain 1 37 1.2E-14 T 23-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RR42_RS11925 01e3548d43d4579ee822719bc3085272 326 SUPERFAMILY SSF103481 56 152 5.23E-9 T 23-04-2016 RR42_RS11925 01e3548d43d4579ee822719bc3085272 326 PANTHER PTHR22911 25 312 1.4E-21 T 23-04-2016 RR42_RS11925 01e3548d43d4579ee822719bc3085272 326 Pfam PF00892 EamA-like transporter family 166 299 1.8E-9 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS11925 01e3548d43d4579ee822719bc3085272 326 Pfam PF00892 EamA-like transporter family 22 149 1.0E-6 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS11925 01e3548d43d4579ee822719bc3085272 326 SUPERFAMILY SSF103481 212 302 4.05E-7 T 23-04-2016 RR42_RS03500 83fdb0ef1d82d410b52de71d20835080 176 Pfam PF04965 Gene 25-like lysozyme 46 150 3.6E-19 T 23-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD RR42_RS03500 83fdb0ef1d82d410b52de71d20835080 176 SUPERFAMILY SSF160719 47 157 4.71E-7 T 23-04-2016 RR42_RS03500 83fdb0ef1d82d410b52de71d20835080 176 PANTHER PTHR38595 12 170 6.8E-51 T 23-04-2016 RR42_RS03500 83fdb0ef1d82d410b52de71d20835080 176 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 19 168 2.7E-20 T 23-04-2016 IPR017737 Type VI secretion system, lysozyme-related protein RR42_RS03500 83fdb0ef1d82d410b52de71d20835080 176 PANTHER PTHR38595:SF1 12 170 6.8E-51 T 23-04-2016 RR42_RS01090 a8e1f0f88fcaf2292569942416c317b1 467 Gene3D G3DSA:3.30.565.10 300 446 4.8E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS01090 a8e1f0f88fcaf2292569942416c317b1 467 PANTHER PTHR24423 2 14 4.6E-15 T 23-04-2016 RR42_RS01090 a8e1f0f88fcaf2292569942416c317b1 467 PANTHER PTHR24423 209 445 4.6E-15 T 23-04-2016 RR42_RS01090 a8e1f0f88fcaf2292569942416c317b1 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 393 4.8E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS01090 a8e1f0f88fcaf2292569942416c317b1 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 4.8E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS01090 a8e1f0f88fcaf2292569942416c317b1 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 445 4.8E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS01090 a8e1f0f88fcaf2292569942416c317b1 467 PANTHER PTHR24423:SF427 2 14 4.6E-15 T 23-04-2016 RR42_RS01090 a8e1f0f88fcaf2292569942416c317b1 467 PANTHER PTHR24423:SF427 209 445 4.6E-15 T 23-04-2016 RR42_RS01090 a8e1f0f88fcaf2292569942416c317b1 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 446 1.6E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS01090 a8e1f0f88fcaf2292569942416c317b1 467 SMART SM00387 334 448 5.8E-11 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS01090 a8e1f0f88fcaf2292569942416c317b1 467 SUPERFAMILY SSF55874 297 446 2.49E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS05450 fcea22cb6f6fc767954a681214092ada 214 PANTHER PTHR35809 1 214 4.1E-61 T 23-04-2016 RR42_RS05450 fcea22cb6f6fc767954a681214092ada 214 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 7 212 1.6E-70 T 23-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 RR42_RS05450 fcea22cb6f6fc767954a681214092ada 214 Pfam PF02666 Phosphatidylserine decarboxylase 43 210 3.9E-31 T 23-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 RR42_RS05450 fcea22cb6f6fc767954a681214092ada 214 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 7 214 37.999 T 23-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 RR42_RS06010 cb720d8e4b8a002e895368ea5abb82ac 163 Gene3D G3DSA:3.40.50.270 1 154 4.3E-49 T 23-04-2016 RR42_RS06010 cb720d8e4b8a002e895368ea5abb82ac 163 PANTHER PTHR11717:SF7 2 160 7.8E-51 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RR42_RS06010 cb720d8e4b8a002e895368ea5abb82ac 163 SUPERFAMILY SSF52788 2 154 4.84E-48 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RR42_RS06010 cb720d8e4b8a002e895368ea5abb82ac 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 6 23 6.9E-20 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RR42_RS06010 cb720d8e4b8a002e895368ea5abb82ac 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 49 65 6.9E-20 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RR42_RS06010 cb720d8e4b8a002e895368ea5abb82ac 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 125 140 6.9E-20 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RR42_RS06010 cb720d8e4b8a002e895368ea5abb82ac 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 83 98 6.9E-20 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RR42_RS06010 cb720d8e4b8a002e895368ea5abb82ac 163 PANTHER PTHR11717 2 160 7.8E-51 T 23-04-2016 RR42_RS06010 cb720d8e4b8a002e895368ea5abb82ac 163 SMART SM00226 4 153 6.6E-37 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RR42_RS06010 cb720d8e4b8a002e895368ea5abb82ac 163 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 149 3.6E-36 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RR42_RS12070 6cc24b1f15c16ed8d164135ec2ed3ab3 489 PANTHER PTHR23501 31 489 4.8E-99 T 23-04-2016 RR42_RS12070 6cc24b1f15c16ed8d164135ec2ed3ab3 489 Gene3D G3DSA:1.20.1250.20 279 488 3.9E-13 T 23-04-2016 RR42_RS12070 6cc24b1f15c16ed8d164135ec2ed3ab3 489 Gene3D G3DSA:1.20.1250.20 30 217 7.5E-27 T 23-04-2016 RR42_RS12070 6cc24b1f15c16ed8d164135ec2ed3ab3 489 PRINTS PR01036 Tetracycline resistance protein TetB signature 128 148 4.8E-10 T 23-04-2016 RR42_RS12070 6cc24b1f15c16ed8d164135ec2ed3ab3 489 PRINTS PR01036 Tetracycline resistance protein TetB signature 356 376 4.8E-10 T 23-04-2016 RR42_RS12070 6cc24b1f15c16ed8d164135ec2ed3ab3 489 PRINTS PR01036 Tetracycline resistance protein TetB signature 37 61 4.8E-10 T 23-04-2016 RR42_RS12070 6cc24b1f15c16ed8d164135ec2ed3ab3 489 PRINTS PR01036 Tetracycline resistance protein TetB signature 158 182 4.8E-10 T 23-04-2016 RR42_RS12070 6cc24b1f15c16ed8d164135ec2ed3ab3 489 SUPERFAMILY SSF103473 267 485 7.06E-58 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS12070 6cc24b1f15c16ed8d164135ec2ed3ab3 489 SUPERFAMILY SSF103473 17 211 7.06E-58 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS12070 6cc24b1f15c16ed8d164135ec2ed3ab3 489 Pfam PF07690 Major Facilitator Superfamily 38 428 3.9E-43 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS12070 6cc24b1f15c16ed8d164135ec2ed3ab3 489 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 34 437 5.6E-77 T 23-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RR42_RS19570 0dd4b8ce9c8dbdcbe4f2836fea8e622f 182 PIRSF PIRSF006707 1 176 2.0E-62 T 23-04-2016 IPR026282 DNA-binding protein, MJ1563 type RR42_RS19570 0dd4b8ce9c8dbdcbe4f2836fea8e622f 182 PANTHER PTHR38465 1 172 1.3E-12 T 23-04-2016 RR42_RS19570 0dd4b8ce9c8dbdcbe4f2836fea8e622f 182 SUPERFAMILY SSF46785 3 141 1.39E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19570 0dd4b8ce9c8dbdcbe4f2836fea8e622f 182 Gene3D G3DSA:1.10.10.10 1 87 5.0E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19570 0dd4b8ce9c8dbdcbe4f2836fea8e622f 182 Pfam PF12802 MarR family 26 80 4.4E-10 T 23-04-2016 RR42_RS18615 f210af21cb3e3cef6bd6ed3ddfc672c9 164 PANTHER PTHR30399:SF4 1 162 4.7E-93 T 23-04-2016 RR42_RS18615 f210af21cb3e3cef6bd6ed3ddfc672c9 164 Pfam PF01863 Protein of unknown function DUF45 90 146 4.6E-12 T 23-04-2016 IPR002725 Protein of unknown function DUF45 RR42_RS18615 f210af21cb3e3cef6bd6ed3ddfc672c9 164 PANTHER PTHR30399 1 162 4.7E-93 T 23-04-2016 RR42_RS17085 bc894cb326f94b18a8426a4345b92061 340 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 10 334 3.6E-116 T 23-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 RR42_RS17085 bc894cb326f94b18a8426a4345b92061 340 Pfam PF00296 Luciferase-like monooxygenase 23 305 1.7E-37 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RR42_RS17085 bc894cb326f94b18a8426a4345b92061 340 PANTHER PTHR30137 2 335 4.0E-107 T 23-04-2016 RR42_RS17085 bc894cb326f94b18a8426a4345b92061 340 PANTHER PTHR30137:SF7 2 335 4.0E-107 T 23-04-2016 RR42_RS17085 bc894cb326f94b18a8426a4345b92061 340 SUPERFAMILY SSF51679 8 333 2.22E-74 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RR42_RS17085 bc894cb326f94b18a8426a4345b92061 340 Gene3D G3DSA:3.20.20.30 9 333 1.0E-82 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RR42_RS01910 e890004b5b54168b8369b0c13d8845b2 218 Gene3D G3DSA:3.40.30.10 65 213 2.5E-9 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS01910 e890004b5b54168b8369b0c13d8845b2 218 SUPERFAMILY SSF52833 68 213 1.83E-10 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS03245 17033aec05d6381c6bf23a12b0fffb2c 510 PANTHER PTHR30023:SF0 18 506 4.2E-64 T 23-04-2016 RR42_RS03245 17033aec05d6381c6bf23a12b0fffb2c 510 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 60 505 3.9E-80 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RR42_RS03245 17033aec05d6381c6bf23a12b0fffb2c 510 Gene3D G3DSA:3.40.710.10 271 507 1.0E-66 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS03245 17033aec05d6381c6bf23a12b0fffb2c 510 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 465 478 4.3E-24 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RR42_RS03245 17033aec05d6381c6bf23a12b0fffb2c 510 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 388 402 4.3E-24 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RR42_RS03245 17033aec05d6381c6bf23a12b0fffb2c 510 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 329 351 4.3E-24 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RR42_RS03245 17033aec05d6381c6bf23a12b0fffb2c 510 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 403 417 4.3E-24 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RR42_RS03245 17033aec05d6381c6bf23a12b0fffb2c 510 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 96 115 4.3E-24 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RR42_RS03245 17033aec05d6381c6bf23a12b0fffb2c 510 PANTHER PTHR30023 18 506 4.2E-64 T 23-04-2016 RR42_RS03245 17033aec05d6381c6bf23a12b0fffb2c 510 Gene3D G3DSA:3.40.710.10 74 116 7.5E-4 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS03245 17033aec05d6381c6bf23a12b0fffb2c 510 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 88 487 3.8E-56 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RR42_RS03245 17033aec05d6381c6bf23a12b0fffb2c 510 SUPERFAMILY SSF56601 54 508 4.95E-97 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS02490 0b229f08ff3c258e61b5c7f3b31b21f7 185 SUPERFAMILY SSF52540 1 163 7.2E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02490 0b229f08ff3c258e61b5c7f3b31b21f7 185 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 3 137 8.3E-45 T 23-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 RR42_RS02490 0b229f08ff3c258e61b5c7f3b31b21f7 185 Gene3D G3DSA:3.40.50.300 2 167 4.5E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02490 0b229f08ff3c258e61b5c7f3b31b21f7 185 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 3 164 2.0E-39 T 23-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 RR42_RS02490 0b229f08ff3c258e61b5c7f3b31b21f7 185 PANTHER PTHR40072 2 178 6.5E-19 T 23-04-2016 RR42_RS17505 e9d30c3272b3fe3522ef8c23fa5fd247 484 SUPERFAMILY SSF52467 312 483 2.22E-74 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RR42_RS17505 e9d30c3272b3fe3522ef8c23fa5fd247 484 PANTHER PTHR10160 1 483 5.1E-222 T 23-04-2016 RR42_RS17505 e9d30c3272b3fe3522ef8c23fa5fd247 484 Gene3D G3DSA:3.40.50.1220 308 483 8.1E-86 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RR42_RS17505 e9d30c3272b3fe3522ef8c23fa5fd247 484 PIRSF PIRSF000204 1 484 3.2E-207 T 23-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 RR42_RS17505 e9d30c3272b3fe3522ef8c23fa5fd247 484 Pfam PF02233 NAD(P) transhydrogenase beta subunit 5 480 3.7E-186 T 23-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 RR42_RS17505 e9d30c3272b3fe3522ef8c23fa5fd247 484 PANTHER PTHR10160:SF24 1 483 5.1E-222 T 23-04-2016 RR42_RS13530 698be419028b6d1deee3a6a69c92b4a0 152 Pfam PF13279 Thioesterase-like superfamily 11 133 5.0E-11 T 23-04-2016 RR42_RS13530 698be419028b6d1deee3a6a69c92b4a0 152 SUPERFAMILY SSF54637 4 137 6.66E-36 T 23-04-2016 IPR029069 HotDog domain RR42_RS13530 698be419028b6d1deee3a6a69c92b4a0 152 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 10 27 - T 23-04-2016 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 RR42_RS13530 698be419028b6d1deee3a6a69c92b4a0 152 Gene3D G3DSA:3.10.129.10 5 138 1.5E-40 T 23-04-2016 IPR029069 HotDog domain RR42_RS13530 698be419028b6d1deee3a6a69c92b4a0 152 PANTHER PTHR31793 5 148 2.8E-23 T 23-04-2016 RR42_RS00200 05e7b4ad0d140bdcbaf103228aac9142 376 PANTHER PTHR30482 55 367 2.3E-65 T 23-04-2016 RR42_RS00200 05e7b4ad0d140bdcbaf103228aac9142 376 Pfam PF02653 Branched-chain amino acid transport system / permease component 85 354 1.8E-29 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RR42_RS00200 05e7b4ad0d140bdcbaf103228aac9142 376 PANTHER PTHR30482:SF10 55 367 2.3E-65 T 23-04-2016 RR42_RS06210 e4cd0e61b9da0cf8ac6f52299da79f36 577 Pfam PF00501 AMP-binding enzyme 44 467 1.8E-82 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS06210 e4cd0e61b9da0cf8ac6f52299da79f36 577 PANTHER PTHR24095 7 571 8.2E-168 T 23-04-2016 RR42_RS06210 e4cd0e61b9da0cf8ac6f52299da79f36 577 Pfam PF13193 AMP-binding enzyme C-terminal domain 476 558 1.6E-20 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RR42_RS06210 e4cd0e61b9da0cf8ac6f52299da79f36 577 Gene3D G3DSA:3.30.300.30 462 570 2.7E-31 T 23-04-2016 RR42_RS06210 e4cd0e61b9da0cf8ac6f52299da79f36 577 Gene3D G3DSA:3.40.50.980 45 204 8.1E-36 T 23-04-2016 RR42_RS06210 e4cd0e61b9da0cf8ac6f52299da79f36 577 SUPERFAMILY SSF56801 13 569 1.44E-144 T 23-04-2016 RR42_RS06210 e4cd0e61b9da0cf8ac6f52299da79f36 577 PANTHER PTHR24095:SF117 7 571 8.2E-168 T 23-04-2016 RR42_RS06210 e4cd0e61b9da0cf8ac6f52299da79f36 577 ProSitePatterns PS00455 Putative AMP-binding domain signature. 199 210 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS06210 e4cd0e61b9da0cf8ac6f52299da79f36 577 Gene3D G3DSA:3.40.50.980 205 359 1.1E-27 T 23-04-2016 RR42_RS06210 e4cd0e61b9da0cf8ac6f52299da79f36 577 Gene3D G3DSA:2.30.38.10 372 457 1.9E-20 T 23-04-2016 RR42_RS11230 b731b8b56cbea58631d227bfed9970e0 347 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 246 329 8.4E-27 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RR42_RS11230 b731b8b56cbea58631d227bfed9970e0 347 SMART SM00382 45 244 1.3E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS11230 b731b8b56cbea58631d227bfed9970e0 347 SUPERFAMILY SSF52540 16 266 7.88E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11230 b731b8b56cbea58631d227bfed9970e0 347 Gene3D G3DSA:3.40.50.300 15 268 4.8E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11230 b731b8b56cbea58631d227bfed9970e0 347 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 246 310 6.6E-20 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RR42_RS11230 b731b8b56cbea58631d227bfed9970e0 347 Pfam PF00005 ABC transporter 37 194 3.1E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS11230 b731b8b56cbea58631d227bfed9970e0 347 PANTHER PTHR24220 18 337 8.2E-153 T 23-04-2016 RR42_RS11230 b731b8b56cbea58631d227bfed9970e0 347 PANTHER PTHR24220:SF535 18 337 8.2E-153 T 23-04-2016 RR42_RS11230 b731b8b56cbea58631d227bfed9970e0 347 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS19235 acf248b9a6028eb05934c1032a69504f 91 SUPERFAMILY SSF54570 3 84 3.53E-35 T 23-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 RR42_RS19235 acf248b9a6028eb05934c1032a69504f 91 PANTHER PTHR11880 1 91 3.1E-53 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RR42_RS19235 acf248b9a6028eb05934c1032a69504f 91 Pfam PF00203 Ribosomal protein S19 3 83 3.8E-37 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RR42_RS19235 acf248b9a6028eb05934c1032a69504f 91 Gene3D G3DSA:3.30.860.10 1 90 1.5E-41 T 23-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 RR42_RS19235 acf248b9a6028eb05934c1032a69504f 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.418 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RR42_RS19235 acf248b9a6028eb05934c1032a69504f 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 7.3E-45 T 23-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 RR42_RS19235 acf248b9a6028eb05934c1032a69504f 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 23-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 RR42_RS19235 acf248b9a6028eb05934c1032a69504f 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 8.0E-24 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RR42_RS19235 acf248b9a6028eb05934c1032a69504f 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 8.0E-24 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RR42_RS19235 acf248b9a6028eb05934c1032a69504f 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 8.0E-24 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RR42_RS19235 acf248b9a6028eb05934c1032a69504f 91 PIRSF PIRSF002144 1 91 5.6E-33 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RR42_RS04615 9f4ac4b17dbf2d7820899977dc1780b3 377 PANTHER PTHR19328:SF33 7 376 7.8E-102 T 23-04-2016 RR42_RS04615 9f4ac4b17dbf2d7820899977dc1780b3 377 PANTHER PTHR19328 7 376 7.8E-102 T 23-04-2016 RR42_RS04615 9f4ac4b17dbf2d7820899977dc1780b3 377 Gene3D G3DSA:2.120.10.30 31 376 9.3E-71 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like RR42_RS04615 9f4ac4b17dbf2d7820899977dc1780b3 377 SUPERFAMILY SSF50952 37 375 1.57E-38 T 23-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RR42_RS04615 9f4ac4b17dbf2d7820899977dc1780b3 377 Pfam PF07995 Glucose / Sorbosone dehydrogenase 144 371 1.8E-18 T 23-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 RR42_RS11120 f9c86e787b3df9957f99e30b8b21358f 213 PANTHER PTHR35568:SF1 1 213 2.5E-78 T 23-04-2016 RR42_RS11120 f9c86e787b3df9957f99e30b8b21358f 213 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 15 131 8.0E-53 T 23-04-2016 IPR013559 YheO-like RR42_RS11120 f9c86e787b3df9957f99e30b8b21358f 213 Pfam PF13309 HTH domain 152 212 3.7E-18 T 23-04-2016 RR42_RS11120 f9c86e787b3df9957f99e30b8b21358f 213 Pfam PF08348 YheO-like PAS domain 16 126 1.1E-35 T 23-04-2016 IPR013559 YheO-like RR42_RS11120 f9c86e787b3df9957f99e30b8b21358f 213 PANTHER PTHR35568 1 213 2.5E-78 T 23-04-2016 RR42_RS19520 79b0c52c54acd23f88594355fd414043 809 Pfam PF00263 Bacterial type II and III secretion system protein 529 696 1.4E-50 T 23-04-2016 IPR004846 Type II/III secretion system GO:0009306 RR42_RS19520 79b0c52c54acd23f88594355fd414043 809 PRINTS PR00811 Bacterial general secretion pathway protein D signature 560 570 1.6E-25 T 23-04-2016 IPR001775 GspD/PilQ family RR42_RS19520 79b0c52c54acd23f88594355fd414043 809 PRINTS PR00811 Bacterial general secretion pathway protein D signature 525 549 1.6E-25 T 23-04-2016 IPR001775 GspD/PilQ family RR42_RS19520 79b0c52c54acd23f88594355fd414043 809 PRINTS PR00811 Bacterial general secretion pathway protein D signature 660 678 1.6E-25 T 23-04-2016 IPR001775 GspD/PilQ family RR42_RS19520 79b0c52c54acd23f88594355fd414043 809 PRINTS PR00811 Bacterial general secretion pathway protein D signature 433 443 1.6E-25 T 23-04-2016 IPR001775 GspD/PilQ family RR42_RS19520 79b0c52c54acd23f88594355fd414043 809 PRINTS PR00811 Bacterial general secretion pathway protein D signature 683 697 1.6E-25 T 23-04-2016 IPR001775 GspD/PilQ family RR42_RS19520 79b0c52c54acd23f88594355fd414043 809 PANTHER PTHR30332:SF8 58 760 9.9E-170 T 23-04-2016 RR42_RS19520 79b0c52c54acd23f88594355fd414043 809 PANTHER PTHR30332 58 760 9.9E-170 T 23-04-2016 RR42_RS19520 79b0c52c54acd23f88594355fd414043 809 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 60 704 6.5E-188 T 23-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 RR42_RS19520 79b0c52c54acd23f88594355fd414043 809 Pfam PF03958 Bacterial type II/III secretion system short domain 219 296 6.1E-15 T 23-04-2016 IPR005644 NolW-like RR42_RS19520 79b0c52c54acd23f88594355fd414043 809 Pfam PF03958 Bacterial type II/III secretion system short domain 303 433 5.5E-15 T 23-04-2016 IPR005644 NolW-like RR42_RS19520 79b0c52c54acd23f88594355fd414043 809 Pfam PF03958 Bacterial type II/III secretion system short domain 156 215 4.5E-12 T 23-04-2016 IPR005644 NolW-like RR42_RS02660 5b2f578fe8719ca791350b736e5df33e 380 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 7 380 40.599 T 23-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 RR42_RS02660 5b2f578fe8719ca791350b736e5df33e 380 Gene3D G3DSA:3.30.420.40 150 338 7.0E-69 T 23-04-2016 RR42_RS02660 5b2f578fe8719ca791350b736e5df33e 380 PANTHER PTHR30605:SF0 1 379 5.2E-138 T 23-04-2016 RR42_RS02660 5b2f578fe8719ca791350b736e5df33e 380 Pfam PF03702 Uncharacterised protein family (UPF0075) 9 379 1.2E-137 T 23-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 RR42_RS02660 5b2f578fe8719ca791350b736e5df33e 380 SUPERFAMILY SSF53067 148 343 8.03E-22 T 23-04-2016 RR42_RS02660 5b2f578fe8719ca791350b736e5df33e 380 SUPERFAMILY SSF53067 69 114 8.03E-22 T 23-04-2016 RR42_RS02660 5b2f578fe8719ca791350b736e5df33e 380 SUPERFAMILY SSF53067 9 42 8.03E-22 T 23-04-2016 RR42_RS02660 5b2f578fe8719ca791350b736e5df33e 380 PANTHER PTHR30605 1 379 5.2E-138 T 23-04-2016 RR42_RS13250 e92bd267147cd94f1c57eb5452ae117a 316 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 41 311 5.1E-85 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS13250 e92bd267147cd94f1c57eb5452ae117a 316 PANTHER PTHR30349 1 270 1.5E-93 T 23-04-2016 RR42_RS13250 e92bd267147cd94f1c57eb5452ae117a 316 PIRSF PIRSF017082 1 316 8.0E-90 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS13250 e92bd267147cd94f1c57eb5452ae117a 316 SUPERFAMILY SSF53850 89 277 2.08E-15 T 23-04-2016 RR42_RS13250 e92bd267147cd94f1c57eb5452ae117a 316 PANTHER PTHR30349:SF16 1 270 1.5E-93 T 23-04-2016 RR42_RS14625 b803dc521b2075a59fee079f86e34ab0 318 PANTHER PTHR11358 9 317 2.6E-92 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RR42_RS14625 b803dc521b2075a59fee079f86e34ab0 318 PANTHER PTHR11358:SF35 9 317 2.6E-92 T 23-04-2016 RR42_RS14625 b803dc521b2075a59fee079f86e34ab0 318 SUPERFAMILY SSF52768 18 317 1.8E-76 T 23-04-2016 RR42_RS14625 b803dc521b2075a59fee079f86e34ab0 318 Hamap MF_00737 Formimidoylglutamase [hutG]. 10 318 40.084 T 23-04-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8|UniPathway: UPA00379 RR42_RS14625 b803dc521b2075a59fee079f86e34ab0 318 TIGRFAM TIGR01227 hutG: formimidoylglutamase 15 315 5.4E-87 T 23-04-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8|UniPathway: UPA00379 RR42_RS14625 b803dc521b2075a59fee079f86e34ab0 318 Gene3D G3DSA:3.40.800.10 13 317 6.3E-91 T 23-04-2016 IPR023696 Ureohydrolase domain RR42_RS14625 b803dc521b2075a59fee079f86e34ab0 318 Pfam PF00491 Arginase family 47 317 2.3E-58 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RR42_RS14625 b803dc521b2075a59fee079f86e34ab0 318 PIRSF PIRSF036979 45 318 1.6E-27 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RR42_RS14625 b803dc521b2075a59fee079f86e34ab0 318 PRINTS PR00116 Arginase signature 125 140 8.0E-6 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RR42_RS14625 b803dc521b2075a59fee079f86e34ab0 318 PRINTS PR00116 Arginase signature 279 293 8.0E-6 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RR42_RS14625 b803dc521b2075a59fee079f86e34ab0 318 PRINTS PR00116 Arginase signature 244 273 8.0E-6 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RR42_RS14625 b803dc521b2075a59fee079f86e34ab0 318 ProSitePatterns PS01053 Arginase family signature. 247 268 - T 23-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 RR42_RS09050 036785a09af516df8b477c015ca31834 231 Gene3D G3DSA:3.40.50.1110 42 222 4.1E-51 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain RR42_RS09050 036785a09af516df8b477c015ca31834 231 SUPERFAMILY SSF52266 43 221 2.44E-47 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain RR42_RS09050 036785a09af516df8b477c015ca31834 231 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 46 205 2.0E-21 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain RR42_RS09050 036785a09af516df8b477c015ca31834 231 PANTHER PTHR30383 44 218 2.5E-41 T 23-04-2016 RR42_RS10015 726d47f5004934c2c04765088302538d 435 Gene3D G3DSA:1.20.1250.20 221 401 9.8E-17 T 23-04-2016 RR42_RS10015 726d47f5004934c2c04765088302538d 435 Gene3D G3DSA:1.20.1250.20 13 198 3.8E-35 T 23-04-2016 RR42_RS10015 726d47f5004934c2c04765088302538d 435 ProSitePatterns PS00217 Sugar transport proteins signature 2. 111 136 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RR42_RS10015 726d47f5004934c2c04765088302538d 435 SUPERFAMILY SSF103473 9 407 4.05E-72 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS10015 726d47f5004934c2c04765088302538d 435 PANTHER PTHR23508:SF18 1 421 2.8E-121 T 23-04-2016 RR42_RS10015 726d47f5004934c2c04765088302538d 435 PANTHER PTHR23508 1 421 2.8E-121 T 23-04-2016 RR42_RS10015 726d47f5004934c2c04765088302538d 435 Pfam PF07690 Major Facilitator Superfamily 25 359 1.5E-40 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS10015 726d47f5004934c2c04765088302538d 435 ProSitePatterns PS00216 Sugar transport proteins signature 1. 276 293 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RR42_RS11705 3c53d7f6f12197a76b11063b3568a24a 118 Pfam PF00582 Universal stress protein family 68 116 1.6E-7 T 23-04-2016 IPR006016 UspA GO:0006950 RR42_RS11705 3c53d7f6f12197a76b11063b3568a24a 118 PRINTS PR01438 Universal stress protein signature 96 118 2.5E-5 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS11705 3c53d7f6f12197a76b11063b3568a24a 118 PRINTS PR01438 Universal stress protein signature 78 90 2.5E-5 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS11705 3c53d7f6f12197a76b11063b3568a24a 118 SUPERFAMILY SSF52402 3 117 3.85E-15 T 23-04-2016 RR42_RS11705 3c53d7f6f12197a76b11063b3568a24a 118 Gene3D G3DSA:3.40.50.620 43 116 2.4E-14 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS20120 176b169cfbee20e2d05d60d5b43be095 383 PANTHER PTHR30483 11 380 1.4E-80 T 23-04-2016 RR42_RS20120 176b169cfbee20e2d05d60d5b43be095 383 Pfam PF13458 Periplasmic binding protein 31 372 7.7E-56 T 23-04-2016 IPR028081 Leucine-binding protein domain RR42_RS20120 176b169cfbee20e2d05d60d5b43be095 383 PANTHER PTHR30483:SF20 11 380 1.4E-80 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RR42_RS20120 176b169cfbee20e2d05d60d5b43be095 383 Gene3D G3DSA:3.40.50.2300 31 232 2.1E-63 T 23-04-2016 RR42_RS20120 176b169cfbee20e2d05d60d5b43be095 383 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 262 280 9.8E-6 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RR42_RS20120 176b169cfbee20e2d05d60d5b43be095 383 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 32 48 9.8E-6 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RR42_RS20120 176b169cfbee20e2d05d60d5b43be095 383 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 97 107 9.8E-6 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RR42_RS20120 176b169cfbee20e2d05d60d5b43be095 383 SUPERFAMILY SSF53822 31 377 9.42E-88 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RR42_RS18645 d91e076d8ca5c9171c4fe883c60a8fbd 295 PANTHER PTHR35273 34 288 1.9E-97 T 23-04-2016 RR42_RS18645 d91e076d8ca5c9171c4fe883c60a8fbd 295 Pfam PF03537 Glycoside-hydrolase family GH114 65 288 2.4E-87 T 23-04-2016 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain RR42_RS18645 d91e076d8ca5c9171c4fe883c60a8fbd 295 SUPERFAMILY SSF51445 64 289 8.0E-53 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily RR42_RS18645 d91e076d8ca5c9171c4fe883c60a8fbd 295 PANTHER PTHR35273:SF1 34 288 1.9E-97 T 23-04-2016 RR42_RS12560 51dd4222c4022ecf6a73f511d9d9ca02 573 Pfam PF02562 PhoH-like protein 360 567 1.1E-54 T 23-04-2016 IPR003714 PhoH-like protein GO:0005524 RR42_RS12560 51dd4222c4022ecf6a73f511d9d9ca02 573 Gene3D G3DSA:3.40.50.300 357 572 6.6E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12560 51dd4222c4022ecf6a73f511d9d9ca02 573 Gene3D G3DSA:3.40.50.1010 210 266 1.1E-8 T 23-04-2016 IPR029060 PIN domain-like RR42_RS12560 51dd4222c4022ecf6a73f511d9d9ca02 573 Gene3D G3DSA:3.40.50.1010 113 172 1.1E-8 T 23-04-2016 IPR029060 PIN domain-like RR42_RS12560 51dd4222c4022ecf6a73f511d9d9ca02 573 SUPERFAMILY SSF52540 359 445 3.65E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12560 51dd4222c4022ecf6a73f511d9d9ca02 573 SUPERFAMILY SSF52540 478 553 3.65E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12560 51dd4222c4022ecf6a73f511d9d9ca02 573 PANTHER PTHR30473:SF2 308 573 1.1E-178 T 23-04-2016 RR42_RS12560 51dd4222c4022ecf6a73f511d9d9ca02 573 PANTHER PTHR30473:SF2 111 287 1.1E-178 T 23-04-2016 RR42_RS12560 51dd4222c4022ecf6a73f511d9d9ca02 573 SMART SM00670 112 247 1.3E-11 T 23-04-2016 IPR002716 PIN domain RR42_RS12560 51dd4222c4022ecf6a73f511d9d9ca02 573 PANTHER PTHR30473 308 573 1.1E-178 T 23-04-2016 RR42_RS12560 51dd4222c4022ecf6a73f511d9d9ca02 573 PANTHER PTHR30473 111 287 1.1E-178 T 23-04-2016 RR42_RS12560 51dd4222c4022ecf6a73f511d9d9ca02 573 SUPERFAMILY SSF88723 112 173 2.16E-10 T 23-04-2016 IPR029060 PIN domain-like RR42_RS12560 51dd4222c4022ecf6a73f511d9d9ca02 573 SUPERFAMILY SSF88723 210 262 2.16E-10 T 23-04-2016 IPR029060 PIN domain-like RR42_RS12560 51dd4222c4022ecf6a73f511d9d9ca02 573 Pfam PF13638 PIN domain 114 259 6.4E-39 T 23-04-2016 IPR002716 PIN domain RR42_RS14845 c4034520967bb066f67a8370313df5d0 150 Pfam PF12802 MarR family 40 98 5.1E-13 T 23-04-2016 RR42_RS14845 c4034520967bb066f67a8370313df5d0 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 144 2.6E-8 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS14845 c4034520967bb066f67a8370313df5d0 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 2.6E-8 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS14845 c4034520967bb066f67a8370313df5d0 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 2.6E-8 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS14845 c4034520967bb066f67a8370313df5d0 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 2.6E-8 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS14845 c4034520967bb066f67a8370313df5d0 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 73 107 - T 23-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site RR42_RS14845 c4034520967bb066f67a8370313df5d0 150 SMART SM00347 34 134 1.7E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS14845 c4034520967bb066f67a8370313df5d0 150 SUPERFAMILY SSF46785 8 147 5.6E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS14845 c4034520967bb066f67a8370313df5d0 150 PANTHER PTHR33164 11 150 1.1E-16 T 23-04-2016 RR42_RS14845 c4034520967bb066f67a8370313df5d0 150 Gene3D G3DSA:1.10.10.10 10 146 1.8E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS04070 fd4162f7693fe48d61b10bebaf09d845 334 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 90 2.4E-8 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RR42_RS04070 fd4162f7693fe48d61b10bebaf09d845 334 Gene3D G3DSA:3.90.180.10 5 154 6.7E-45 T 23-04-2016 IPR011032 GroES-like RR42_RS04070 fd4162f7693fe48d61b10bebaf09d845 334 Gene3D G3DSA:3.40.50.720 155 262 2.3E-23 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS04070 fd4162f7693fe48d61b10bebaf09d845 334 Pfam PF13602 Zinc-binding dehydrogenase 195 329 3.1E-21 T 23-04-2016 RR42_RS04070 fd4162f7693fe48d61b10bebaf09d845 334 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 149 170 - T 23-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 RR42_RS04070 fd4162f7693fe48d61b10bebaf09d845 334 PANTHER PTHR11695 18 334 2.1E-86 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RR42_RS04070 fd4162f7693fe48d61b10bebaf09d845 334 SUPERFAMILY SSF51735 121 298 4.52E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS04070 fd4162f7693fe48d61b10bebaf09d845 334 SUPERFAMILY SSF50129 5 153 2.59E-38 T 23-04-2016 IPR011032 GroES-like RR42_RS04070 fd4162f7693fe48d61b10bebaf09d845 334 PANTHER PTHR11695:SF294 18 334 2.1E-86 T 23-04-2016 RR42_RS04070 fd4162f7693fe48d61b10bebaf09d845 334 SMART SM00829 15 329 7.2E-34 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RR42_RS13310 e2056fd0a378c3cd88ae4e1d2f26065b 108 SUPERFAMILY SSF52833 3 107 1.99E-41 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS13310 e2056fd0a378c3cd88ae4e1d2f26065b 108 Pfam PF00085 Thioredoxin 5 105 5.3E-35 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 RR42_RS13310 e2056fd0a378c3cd88ae4e1d2f26065b 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 105 8.8E-40 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RR42_RS13310 e2056fd0a378c3cd88ae4e1d2f26065b 108 Gene3D G3DSA:3.40.30.10 2 106 4.3E-40 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS13310 e2056fd0a378c3cd88ae4e1d2f26065b 108 PIRSF PIRSF000077 2 108 2.8E-44 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RR42_RS13310 e2056fd0a378c3cd88ae4e1d2f26065b 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RR42_RS13310 e2056fd0a378c3cd88ae4e1d2f26065b 108 PRINTS PR00421 Thioredoxin family signature 24 32 9.6E-10 T 23-04-2016 RR42_RS13310 e2056fd0a378c3cd88ae4e1d2f26065b 108 PRINTS PR00421 Thioredoxin family signature 72 83 9.6E-10 T 23-04-2016 RR42_RS13310 e2056fd0a378c3cd88ae4e1d2f26065b 108 PRINTS PR00421 Thioredoxin family signature 32 41 9.6E-10 T 23-04-2016 RR42_RS13310 e2056fd0a378c3cd88ae4e1d2f26065b 108 PANTHER PTHR10438 4 105 1.1E-40 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RR42_RS13140 2d09d4858585a363b4c33ddceaee9457 430 Pfam PF04551 GcpE protein 31 410 4.3E-113 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 RR42_RS13140 2d09d4858585a363b4c33ddceaee9457 430 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 14 414 28.161 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 RR42_RS13140 2d09d4858585a363b4c33ddceaee9457 430 PANTHER PTHR30454 13 414 9.5E-141 T 23-04-2016 RR42_RS13140 2d09d4858585a363b4c33ddceaee9457 430 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 16 409 2.2E-118 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 RR42_RS13140 2d09d4858585a363b4c33ddceaee9457 430 PIRSF PIRSF004640 11 420 1.6E-129 T 23-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 RR42_RS09100 42b297ebbbf3e8ca8a3b375efd795f2e 206 SUPERFAMILY SSF46785 60 195 9.09E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS09100 42b297ebbbf3e8ca8a3b375efd795f2e 206 Gene3D G3DSA:1.10.10.10 63 193 8.0E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS09100 42b297ebbbf3e8ca8a3b375efd795f2e 206 Pfam PF13463 Winged helix DNA-binding domain 88 153 7.2E-17 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS18090 81ed49fbeb67f8df972c7b61feb05ea6 389 PANTHER PTHR22926:SF5 2 152 8.7E-160 T 23-04-2016 RR42_RS18090 81ed49fbeb67f8df972c7b61feb05ea6 389 PANTHER PTHR22926:SF5 175 389 8.7E-160 T 23-04-2016 RR42_RS18090 81ed49fbeb67f8df972c7b61feb05ea6 389 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 387 23.595 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RR42_RS18090 81ed49fbeb67f8df972c7b61feb05ea6 389 Pfam PF00953 Glycosyl transferase family 4 99 307 3.3E-34 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RR42_RS18090 81ed49fbeb67f8df972c7b61feb05ea6 389 PANTHER PTHR22926 2 152 8.7E-160 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RR42_RS18090 81ed49fbeb67f8df972c7b61feb05ea6 389 PANTHER PTHR22926 175 389 8.7E-160 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RR42_RS18090 81ed49fbeb67f8df972c7b61feb05ea6 389 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 78 8.2E-5 T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RR42_RS18090 81ed49fbeb67f8df972c7b61feb05ea6 389 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 40 389 2.0E-119 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RR42_RS18090 81ed49fbeb67f8df972c7b61feb05ea6 389 ProSitePatterns PS01348 MraY family signature 2. 212 223 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RR42_RS18090 81ed49fbeb67f8df972c7b61feb05ea6 389 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RR42_RS05155 b57ee89ec2f37569c9c15970c30c3fd3 316 Gene3D G3DSA:3.40.50.720 47 118 4.4E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS05155 b57ee89ec2f37569c9c15970c30c3fd3 316 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 47 222 1.3E-16 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RR42_RS05155 b57ee89ec2f37569c9c15970c30c3fd3 316 SUPERFAMILY SSF51735 102 282 5.96E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS05155 b57ee89ec2f37569c9c15970c30c3fd3 316 PANTHER PTHR10996 47 312 4.1E-86 T 23-04-2016 RR42_RS05155 b57ee89ec2f37569c9c15970c30c3fd3 316 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 281 7.6E-48 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RR42_RS05155 b57ee89ec2f37569c9c15970c30c3fd3 316 Gene3D G3DSA:3.40.50.720 119 282 1.2E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS05155 b57ee89ec2f37569c9c15970c30c3fd3 316 SUPERFAMILY SSF52283 47 134 7.94E-24 T 23-04-2016 RR42_RS07590 2ce7067979078a8a1781a47aa21f6ad2 405 Pfam PF01479 S4 domain 77 123 9.9E-10 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RR42_RS07590 2ce7067979078a8a1781a47aa21f6ad2 405 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 194 208 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS07590 2ce7067979078a8a1781a47aa21f6ad2 405 Pfam PF00849 RNA pseudouridylate synthase 152 306 2.5E-30 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS07590 2ce7067979078a8a1781a47aa21f6ad2 405 PANTHER PTHR11079:SF73 67 388 2.4E-121 T 23-04-2016 RR42_RS07590 2ce7067979078a8a1781a47aa21f6ad2 405 PANTHER PTHR11079 67 388 2.4E-121 T 23-04-2016 RR42_RS07590 2ce7067979078a8a1781a47aa21f6ad2 405 SUPERFAMILY SSF55120 137 381 5.14E-74 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS07590 2ce7067979078a8a1781a47aa21f6ad2 405 Gene3D G3DSA:3.10.290.10 77 126 7.4E-11 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RR42_RS07590 2ce7067979078a8a1781a47aa21f6ad2 405 SUPERFAMILY SSF55174 77 164 1.85E-10 T 23-04-2016 RR42_RS07590 2ce7067979078a8a1781a47aa21f6ad2 405 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 75 377 1.5E-90 T 23-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS07590 2ce7067979078a8a1781a47aa21f6ad2 405 SMART SM00363 77 142 2.8E-10 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RR42_RS07945 97eb6b96f9ec8b19e1e9d8da50f47a5c 316 SUPERFAMILY SSF161098 90 301 9.03E-16 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS07945 97eb6b96f9ec8b19e1e9d8da50f47a5c 316 Gene3D G3DSA:1.10.3720.10 87 311 4.9E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS07945 97eb6b96f9ec8b19e1e9d8da50f47a5c 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 314 1.1E-38 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS07945 97eb6b96f9ec8b19e1e9d8da50f47a5c 316 PANTHER PTHR30465:SF0 1 315 9.1E-105 T 23-04-2016 RR42_RS07945 97eb6b96f9ec8b19e1e9d8da50f47a5c 316 PANTHER PTHR30465 1 315 9.1E-105 T 23-04-2016 RR42_RS01290 986124fb9cc0c8c17aa6c297f54c1d88 628 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 140 601 56.848 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 RR42_RS01290 986124fb9cc0c8c17aa6c297f54c1d88 628 PANTHER PTHR30557:SF1 133 163 0.0 T 23-04-2016 RR42_RS01290 986124fb9cc0c8c17aa6c297f54c1d88 628 PANTHER PTHR30557:SF1 24 99 0.0 T 23-04-2016 RR42_RS01290 986124fb9cc0c8c17aa6c297f54c1d88 628 PANTHER PTHR30557:SF1 198 627 0.0 T 23-04-2016 RR42_RS01290 986124fb9cc0c8c17aa6c297f54c1d88 628 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 140 599 3.0E-214 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 RR42_RS01290 986124fb9cc0c8c17aa6c297f54c1d88 628 PANTHER PTHR30557 133 163 0.0 T 23-04-2016 RR42_RS01290 986124fb9cc0c8c17aa6c297f54c1d88 628 PANTHER PTHR30557 24 99 0.0 T 23-04-2016 RR42_RS01290 986124fb9cc0c8c17aa6c297f54c1d88 628 PANTHER PTHR30557 198 627 0.0 T 23-04-2016 RR42_RS01290 986124fb9cc0c8c17aa6c297f54c1d88 628 Pfam PF01964 Radical SAM ThiC family 142 596 3.4E-198 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 RR42_RS01290 986124fb9cc0c8c17aa6c297f54c1d88 628 Pfam PF13667 ThiC-associated domain 25 101 1.0E-30 T 23-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 RR42_RS07355 3466644bf1aa560a008713b8946a6643 210 SMART SM00448 13 124 1.9E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS07355 3466644bf1aa560a008713b8946a6643 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 205 1.3E-20 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS07355 3466644bf1aa560a008713b8946a6643 210 SMART SM00421 148 205 1.1E-20 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS07355 3466644bf1aa560a008713b8946a6643 210 Gene3D G3DSA:3.40.50.2300 13 156 7.3E-37 T 23-04-2016 RR42_RS07355 3466644bf1aa560a008713b8946a6643 210 PANTHER PTHR26402 13 206 1.2E-70 T 23-04-2016 RR42_RS07355 3466644bf1aa560a008713b8946a6643 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 2.525211E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS07355 3466644bf1aa560a008713b8946a6643 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 2.525211E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS07355 3466644bf1aa560a008713b8946a6643 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 2.525211E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS07355 3466644bf1aa560a008713b8946a6643 210 PANTHER PTHR26402:SF613 13 206 1.2E-70 T 23-04-2016 RR42_RS07355 3466644bf1aa560a008713b8946a6643 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS07355 3466644bf1aa560a008713b8946a6643 210 Gene3D G3DSA:1.10.10.10 157 208 8.2E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS07355 3466644bf1aa560a008713b8946a6643 210 Pfam PF00072 Response regulator receiver domain 15 124 6.4E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS07355 3466644bf1aa560a008713b8946a6643 210 SUPERFAMILY SSF52172 12 148 1.32E-36 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS07355 3466644bf1aa560a008713b8946a6643 210 SUPERFAMILY SSF46894 139 207 6.8E-20 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS16470 a9dc7f818683ef4492695c8a4058bf24 510 Gene3D G3DSA:3.40.640.10 188 401 2.4E-48 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS16470 a9dc7f818683ef4492695c8a4058bf24 510 SUPERFAMILY SSF53383 152 508 6.49E-76 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS16470 a9dc7f818683ef4492695c8a4058bf24 510 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 83 1.7E-13 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS16470 a9dc7f818683ef4492695c8a4058bf24 510 PANTHER PTHR11751:SF10 133 510 8.2E-95 T 23-04-2016 RR42_RS16470 a9dc7f818683ef4492695c8a4058bf24 510 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 57 2.4E-5 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS16470 a9dc7f818683ef4492695c8a4058bf24 510 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 57 73 2.4E-5 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS16470 a9dc7f818683ef4492695c8a4058bf24 510 Pfam PF00155 Aminotransferase class I and II 178 374 6.8E-12 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RR42_RS16470 a9dc7f818683ef4492695c8a4058bf24 510 SUPERFAMILY SSF46785 14 85 1.69E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS16470 a9dc7f818683ef4492695c8a4058bf24 510 Gene3D G3DSA:1.10.10.10 17 85 4.8E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS16470 a9dc7f818683ef4492695c8a4058bf24 510 PANTHER PTHR11751 133 510 8.2E-95 T 23-04-2016 RR42_RS16470 a9dc7f818683ef4492695c8a4058bf24 510 SMART SM00345 24 83 9.0E-14 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS09045 0bf414c4d66167bea57e06b9cf309002 649 SUPERFAMILY SSF54534 264 372 1.37E-32 T 23-04-2016 RR42_RS09045 0bf414c4d66167bea57e06b9cf309002 649 PANTHER PTHR10657:SF11 245 424 2.1E-79 T 23-04-2016 RR42_RS09045 0bf414c4d66167bea57e06b9cf309002 649 PANTHER PTHR10657:SF11 1 170 2.1E-79 T 23-04-2016 RR42_RS09045 0bf414c4d66167bea57e06b9cf309002 649 PANTHER PTHR10657 245 424 2.1E-79 T 23-04-2016 RR42_RS09045 0bf414c4d66167bea57e06b9cf309002 649 PANTHER PTHR10657 1 170 2.1E-79 T 23-04-2016 RR42_RS09045 0bf414c4d66167bea57e06b9cf309002 649 SUPERFAMILY SSF109998 42 171 3.34E-27 T 23-04-2016 IPR027304 Trigger factor/SurA domain RR42_RS09045 0bf414c4d66167bea57e06b9cf309002 649 SUPERFAMILY SSF109998 205 247 3.34E-27 T 23-04-2016 IPR027304 Trigger factor/SurA domain RR42_RS09045 0bf414c4d66167bea57e06b9cf309002 649 Gene3D G3DSA:3.10.50.40 264 396 2.3E-46 T 23-04-2016 RR42_RS09045 0bf414c4d66167bea57e06b9cf309002 649 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 312 333 - T 23-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site RR42_RS09045 0bf414c4d66167bea57e06b9cf309002 649 Pfam PF00639 PPIC-type PPIASE domain 277 372 8.4E-28 T 23-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 RR42_RS09045 0bf414c4d66167bea57e06b9cf309002 649 Pfam PF13624 SurA N-terminal domain 1 167 2.3E-40 T 23-04-2016 RR42_RS05310 b330e6a82706fb0f7a856f408b16bdb4 142 Pfam PF12779 YXWGXW repeat (2 copies) 119 141 2.4 T 23-04-2016 IPR024447 YXWGXW repeat RR42_RS05310 b330e6a82706fb0f7a856f408b16bdb4 142 Pfam PF12779 YXWGXW repeat (2 copies) 71 94 9.2E-4 T 23-04-2016 IPR024447 YXWGXW repeat RR42_RS05100 e54eb0ac461fd2b6d15ff24d87b46eed 321 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 8 313 1.2E-140 T 23-04-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 RR42_RS05100 e54eb0ac461fd2b6d15ff24d87b46eed 321 Gene3D G3DSA:3.40.50.720 7 146 1.8E-72 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS05100 e54eb0ac461fd2b6d15ff24d87b46eed 321 PANTHER PTHR41706 4 320 2.6E-135 T 23-04-2016 RR42_RS05100 e54eb0ac461fd2b6d15ff24d87b46eed 321 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 321 145.388 T 23-04-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 RR42_RS05100 e54eb0ac461fd2b6d15ff24d87b46eed 321 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 134 288 6.2E-65 T 23-04-2016 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 RR42_RS05100 e54eb0ac461fd2b6d15ff24d87b46eed 321 SUPERFAMILY SSF55347 134 288 7.85E-65 T 23-04-2016 RR42_RS05100 e54eb0ac461fd2b6d15ff24d87b46eed 321 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 10 123 4.6E-12 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RR42_RS05100 e54eb0ac461fd2b6d15ff24d87b46eed 321 SMART SM00859 10 126 3.1E-11 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RR42_RS05100 e54eb0ac461fd2b6d15ff24d87b46eed 321 PIRSF PIRSF015689 5 319 3.0E-131 T 23-04-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 RR42_RS05100 e54eb0ac461fd2b6d15ff24d87b46eed 321 SUPERFAMILY SSF51735 8 158 1.37E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS05100 e54eb0ac461fd2b6d15ff24d87b46eed 321 Gene3D G3DSA:3.30.360.10 147 288 6.8E-73 T 23-04-2016 RR42_RS06165 fd21c3a79aa8df78130e71e2602dded6 290 SUPERFAMILY SSF51569 2 276 3.85E-101 T 23-04-2016 RR42_RS06165 fd21c3a79aa8df78130e71e2602dded6 290 Gene3D G3DSA:3.20.20.70 12 277 3.0E-114 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS06165 fd21c3a79aa8df78130e71e2602dded6 290 PANTHER PTHR21057:SF2 5 284 3.6E-159 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RR42_RS06165 fd21c3a79aa8df78130e71e2602dded6 290 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 274 3.7E-122 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RR42_RS06165 fd21c3a79aa8df78130e71e2602dded6 290 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 276 52.937 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RR42_RS06165 fd21c3a79aa8df78130e71e2602dded6 290 PANTHER PTHR21057 5 284 3.6E-159 T 23-04-2016 RR42_RS06165 fd21c3a79aa8df78130e71e2602dded6 290 Pfam PF00793 DAHP synthetase I family 8 274 2.9E-68 T 23-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RR42_RS20355 3087af98449a5b4879d8f60f59dd20e0 2006 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 1062 1245 8.2E-16 T 23-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 RR42_RS20355 3087af98449a5b4879d8f60f59dd20e0 2006 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 547 666 1.7E-30 T 23-04-2016 IPR021868 Alpha-2-macroglobulin MG1 domain RR42_RS20355 3087af98449a5b4879d8f60f59dd20e0 2006 Pfam PF01835 MG2 domain 673 777 6.9E-24 T 23-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 RR42_RS20355 3087af98449a5b4879d8f60f59dd20e0 2006 SMART SM01360 1303 1393 9.2E-19 T 23-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 RR42_RS20355 3087af98449a5b4879d8f60f59dd20e0 2006 PANTHER PTHR40094:SF1 1175 2006 7.5E-64 T 23-04-2016 RR42_RS20355 3087af98449a5b4879d8f60f59dd20e0 2006 PANTHER PTHR40094:SF1 16 860 7.5E-64 T 23-04-2016 RR42_RS20355 3087af98449a5b4879d8f60f59dd20e0 2006 PANTHER PTHR40094:SF1 879 1139 7.5E-64 T 23-04-2016 RR42_RS20355 3087af98449a5b4879d8f60f59dd20e0 2006 SMART SM01359 1062 1245 5.1E-42 T 23-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 RR42_RS20355 3087af98449a5b4879d8f60f59dd20e0 2006 Pfam PF00207 Alpha-2-macroglobulin family 1305 1390 1.5E-7 T 23-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 RR42_RS20355 3087af98449a5b4879d8f60f59dd20e0 2006 PANTHER PTHR40094 1175 2006 7.5E-64 T 23-04-2016 RR42_RS20355 3087af98449a5b4879d8f60f59dd20e0 2006 PANTHER PTHR40094 16 860 7.5E-64 T 23-04-2016 RR42_RS20355 3087af98449a5b4879d8f60f59dd20e0 2006 PANTHER PTHR40094 879 1139 7.5E-64 T 23-04-2016 RR42_RS14325 b1ba721e6406ffd30a88793e184e618a 511 Gene3D G3DSA:3.60.20.10 2 259 4.8E-58 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RR42_RS14325 b1ba721e6406ffd30a88793e184e618a 511 PANTHER PTHR11907:SF0 1 480 3.3E-244 T 23-04-2016 RR42_RS14325 b1ba721e6406ffd30a88793e184e618a 511 PIRSF PIRSF000485 1 483 1.1E-156 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 RR42_RS14325 b1ba721e6406ffd30a88793e184e618a 511 Pfam PF13537 Glutamine amidotransferase domain 81 214 4.8E-17 T 23-04-2016 IPR017932 Glutamine amidotransferase type 2 domain RR42_RS14325 b1ba721e6406ffd30a88793e184e618a 511 SUPERFAMILY SSF53271 252 484 6.03E-72 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS14325 b1ba721e6406ffd30a88793e184e618a 511 Gene3D G3DSA:3.40.50.2020 273 445 4.2E-45 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS14325 b1ba721e6406ffd30a88793e184e618a 511 SUPERFAMILY SSF56235 2 259 5.49E-67 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RR42_RS14325 b1ba721e6406ffd30a88793e184e618a 511 Pfam PF00156 Phosphoribosyl transferase domain 281 395 2.5E-10 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RR42_RS14325 b1ba721e6406ffd30a88793e184e618a 511 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 468 44.206 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 RR42_RS14325 b1ba721e6406ffd30a88793e184e618a 511 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 1.5E-152 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 RR42_RS14325 b1ba721e6406ffd30a88793e184e618a 511 PANTHER PTHR11907 1 480 3.3E-244 T 23-04-2016 RR42_RS37505 1780d3c553154be2b15147452ce51bca 230 PANTHER PTHR30487 1 18 9.9E-90 T 23-04-2016 RR42_RS37505 1780d3c553154be2b15147452ce51bca 230 PANTHER PTHR30487 38 230 9.9E-90 T 23-04-2016 RR42_RS37505 1780d3c553154be2b15147452ce51bca 230 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 1 105 5.8E-32 T 23-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RR42_RS37505 1780d3c553154be2b15147452ce51bca 230 PANTHER PTHR30487:SF0 1 18 9.9E-90 T 23-04-2016 RR42_RS37505 1780d3c553154be2b15147452ce51bca 230 PANTHER PTHR30487:SF0 38 230 9.9E-90 T 23-04-2016 RR42_RS37505 1780d3c553154be2b15147452ce51bca 230 Pfam PF01478 Type IV leader peptidase family 116 224 1.5E-25 T 23-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 RR42_RS37505 1780d3c553154be2b15147452ce51bca 230 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 124 141 4.4E-28 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RR42_RS37505 1780d3c553154be2b15147452ce51bca 230 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 204 219 4.4E-28 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RR42_RS37505 1780d3c553154be2b15147452ce51bca 230 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 192 203 4.4E-28 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RR42_RS37505 1780d3c553154be2b15147452ce51bca 230 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 181 191 4.4E-28 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RR42_RS20750 911372f30e1102eae5665e467c0f67ea 322 PIRSF PIRSF017082 1 322 7.4E-71 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS20750 911372f30e1102eae5665e467c0f67ea 322 SUPERFAMILY SSF53850 106 283 3.93E-10 T 23-04-2016 RR42_RS20750 911372f30e1102eae5665e467c0f67ea 322 PANTHER PTHR30349:SF16 2 292 5.5E-79 T 23-04-2016 RR42_RS20750 911372f30e1102eae5665e467c0f67ea 322 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 45 319 1.0E-82 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS20750 911372f30e1102eae5665e467c0f67ea 322 PANTHER PTHR30349 2 292 5.5E-79 T 23-04-2016 RR42_RS12975 edf98a14f3675fb897e444951bd8fe40 263 Pfam PF08282 haloacid dehalogenase-like hydrolase 18 95 1.0E-6 T 23-04-2016 IPR023214 HAD-like domain RR42_RS12975 edf98a14f3675fb897e444951bd8fe40 263 Pfam PF08282 haloacid dehalogenase-like hydrolase 189 231 1.6E-4 T 23-04-2016 IPR023214 HAD-like domain RR42_RS12975 edf98a14f3675fb897e444951bd8fe40 263 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 18 225 7.4E-24 T 23-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 RR42_RS12975 edf98a14f3675fb897e444951bd8fe40 263 Gene3D G3DSA:3.40.50.1000 12 83 2.1E-19 T 23-04-2016 IPR023214 HAD-like domain RR42_RS12975 edf98a14f3675fb897e444951bd8fe40 263 Gene3D G3DSA:3.40.50.1000 172 258 2.1E-19 T 23-04-2016 IPR023214 HAD-like domain RR42_RS12975 edf98a14f3675fb897e444951bd8fe40 263 SUPERFAMILY SSF56784 13 256 1.07E-30 T 23-04-2016 IPR023214 HAD-like domain RR42_RS03015 4cf031e8b1f463d0da6f87122252cf21 265 Gene3D G3DSA:3.90.226.10 2 263 2.4E-83 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS03015 4cf031e8b1f463d0da6f87122252cf21 265 PANTHER PTHR11941 4 262 2.3E-83 T 23-04-2016 RR42_RS03015 4cf031e8b1f463d0da6f87122252cf21 265 SUPERFAMILY SSF52096 2 264 1.33E-85 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS03015 4cf031e8b1f463d0da6f87122252cf21 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 264 3.7E-59 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RR42_RS17210 da724a4569038702be501d4a72e4a528 328 Gene3D G3DSA:3.40.50.300 18 184 5.4E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17210 da724a4569038702be501d4a72e4a528 328 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 19 321 29.215 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 RR42_RS17210 da724a4569038702be501d4a72e4a528 328 SUPERFAMILY SSF52540 20 162 1.4E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17210 da724a4569038702be501d4a72e4a528 328 SUPERFAMILY SSF52540 17 119 1.33E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17210 da724a4569038702be501d4a72e4a528 328 SUPERFAMILY SSF52540 200 285 1.33E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17210 da724a4569038702be501d4a72e4a528 328 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 19 305 3.2E-89 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 RR42_RS17210 da724a4569038702be501d4a72e4a528 328 PANTHER PTHR11088 18 322 2.0E-101 T 23-04-2016 RR42_RS17210 da724a4569038702be501d4a72e4a528 328 Gene3D G3DSA:1.10.287.890 220 301 1.5E-32 T 23-04-2016 RR42_RS17210 da724a4569038702be501d4a72e4a528 328 Pfam PF01715 IPP transferase 53 304 2.0E-86 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 RR42_RS20175 83377099a368b3b101925fff4af321d7 179 Gene3D G3DSA:1.10.520.20 2 107 1.1E-26 T 23-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain RR42_RS20175 83377099a368b3b101925fff4af321d7 179 SUPERFAMILY SSF47928 3 107 1.7E-22 T 23-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain RR42_RS20175 83377099a368b3b101925fff4af321d7 179 PANTHER PTHR11910 7 174 1.3E-41 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RR42_RS20175 83377099a368b3b101925fff4af321d7 179 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 177 4.5E-50 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RR42_RS20175 83377099a368b3b101925fff4af321d7 179 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 179 19.662 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RR42_RS20175 83377099a368b3b101925fff4af321d7 179 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 174 2.8E-39 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RR42_RS20175 83377099a368b3b101925fff4af321d7 179 PRINTS PR00125 ATP synthase delta subunit signature 76 87 3.4E-26 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RR42_RS20175 83377099a368b3b101925fff4af321d7 179 PRINTS PR00125 ATP synthase delta subunit signature 137 152 3.4E-26 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RR42_RS20175 83377099a368b3b101925fff4af321d7 179 PRINTS PR00125 ATP synthase delta subunit signature 7 26 3.4E-26 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RR42_RS20175 83377099a368b3b101925fff4af321d7 179 PRINTS PR00125 ATP synthase delta subunit signature 152 170 3.4E-26 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RR42_RS20175 83377099a368b3b101925fff4af321d7 179 PRINTS PR00125 ATP synthase delta subunit signature 87 101 3.4E-26 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RR42_RS12180 6c4144fdf2f38e7a2f1f0df5561aa07f 233 Gene3D G3DSA:1.10.150.240 18 90 4.2E-25 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RR42_RS12180 6c4144fdf2f38e7a2f1f0df5561aa07f 233 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 6 189 8.4E-25 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS12180 6c4144fdf2f38e7a2f1f0df5561aa07f 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 111 124 2.1E-32 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS12180 6c4144fdf2f38e7a2f1f0df5561aa07f 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 160 180 2.1E-32 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS12180 6c4144fdf2f38e7a2f1f0df5561aa07f 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 142 158 2.1E-32 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS12180 6c4144fdf2f38e7a2f1f0df5561aa07f 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 187 200 2.1E-32 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS12180 6c4144fdf2f38e7a2f1f0df5561aa07f 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 30 43 2.1E-32 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS12180 6c4144fdf2f38e7a2f1f0df5561aa07f 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 2.1E-32 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS12180 6c4144fdf2f38e7a2f1f0df5561aa07f 233 SUPERFAMILY SSF56784 3 226 3.48E-45 T 23-04-2016 IPR023214 HAD-like domain RR42_RS12180 6c4144fdf2f38e7a2f1f0df5561aa07f 233 PANTHER PTHR12725 1 226 2.6E-20 T 23-04-2016 RR42_RS12180 6c4144fdf2f38e7a2f1f0df5561aa07f 233 Gene3D G3DSA:3.40.50.1000 91 225 1.6E-36 T 23-04-2016 IPR023214 HAD-like domain RR42_RS12180 6c4144fdf2f38e7a2f1f0df5561aa07f 233 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 4 204 6.5E-67 T 23-04-2016 IPR006328 Haloacid dehalogenase, type II GO:0008152|GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 RR42_RS12180 6c4144fdf2f38e7a2f1f0df5561aa07f 233 Pfam PF00702 haloacid dehalogenase-like hydrolase 4 185 6.4E-10 T 23-04-2016 RR42_RS20545 16b7aeb7c9edcbb86229f6cee7fcd40f 209 Pfam PF03473 MOSC domain 64 182 4.1E-21 T 23-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 RR42_RS20545 16b7aeb7c9edcbb86229f6cee7fcd40f 209 PANTHER PTHR30212:SF2 1 197 6.0E-39 T 23-04-2016 RR42_RS20545 16b7aeb7c9edcbb86229f6cee7fcd40f 209 SUPERFAMILY SSF50800 7 203 4.87E-51 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain RR42_RS20545 16b7aeb7c9edcbb86229f6cee7fcd40f 209 Gene3D G3DSA:2.40.33.20 5 198 8.3E-60 T 23-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like RR42_RS20545 16b7aeb7c9edcbb86229f6cee7fcd40f 209 PANTHER PTHR30212 1 197 6.0E-39 T 23-04-2016 RR42_RS01675 3a5ec0e2f36d891db48d0098a8e8dc95 101 PANTHER PTHR38036 11 101 4.5E-18 T 23-04-2016 RR42_RS01675 3a5ec0e2f36d891db48d0098a8e8dc95 101 PANTHER PTHR38036:SF1 11 101 4.5E-18 T 23-04-2016 RR42_RS01675 3a5ec0e2f36d891db48d0098a8e8dc95 101 Gene3D G3DSA:3.30.70.1460 17 101 1.2E-30 T 23-04-2016 IPR027471 YbeD-like domain RR42_RS01675 3a5ec0e2f36d891db48d0098a8e8dc95 101 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 13 101 22.194 T 23-04-2016 IPR007454 Uncharacterised protein family UPF0250 RR42_RS01675 3a5ec0e2f36d891db48d0098a8e8dc95 101 Pfam PF04359 Protein of unknown function (DUF493) 18 101 6.3E-30 T 23-04-2016 IPR007454 Uncharacterised protein family UPF0250 RR42_RS01675 3a5ec0e2f36d891db48d0098a8e8dc95 101 SUPERFAMILY SSF117991 18 101 1.02E-25 T 23-04-2016 IPR027471 YbeD-like domain RR42_RS11810 1c188d0d930c4f07e99960f9ccbcd01a 401 Gene3D G3DSA:3.40.50.2000 177 354 1.0E-7 T 23-04-2016 RR42_RS11810 1c188d0d930c4f07e99960f9ccbcd01a 401 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 21 396 35.948 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 RR42_RS11810 1c188d0d930c4f07e99960f9ccbcd01a 401 SUPERFAMILY SSF53756 24 394 1.7E-28 T 23-04-2016 RR42_RS11810 1c188d0d930c4f07e99960f9ccbcd01a 401 Pfam PF02684 Lipid-A-disaccharide synthetase 24 389 3.6E-95 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 RR42_RS11810 1c188d0d930c4f07e99960f9ccbcd01a 401 PANTHER PTHR30372:SF0 23 399 5.2E-96 T 23-04-2016 RR42_RS11810 1c188d0d930c4f07e99960f9ccbcd01a 401 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 23 388 3.1E-96 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 RR42_RS11810 1c188d0d930c4f07e99960f9ccbcd01a 401 PANTHER PTHR30372 23 399 5.2E-96 T 23-04-2016 RR42_RS05985 3c6a938e194b906a7b9108a5ab85c3e8 413 PIRSF PIRSF020818 1 413 2.3E-198 T 23-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase RR42_RS05985 3c6a938e194b906a7b9108a5ab85c3e8 413 Gene3D G3DSA:3.40.50.1820 106 412 5.4E-9 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS05985 3c6a938e194b906a7b9108a5ab85c3e8 413 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 2 411 1.2E-179 T 23-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase RR42_RS05985 3c6a938e194b906a7b9108a5ab85c3e8 413 Pfam PF06850 PHB de-polymerase C-terminus 211 411 9.1E-98 T 23-04-2016 IPR009656 PHB de-polymerase, C-terminal RR42_RS05985 3c6a938e194b906a7b9108a5ab85c3e8 413 SUPERFAMILY SSF53474 107 409 1.86E-29 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS11520 0ddc3779cae44d1e1bfaf3f4260fee4c 262 SMART SM00382 33 216 9.5E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS11520 0ddc3779cae44d1e1bfaf3f4260fee4c 262 SUPERFAMILY SSF52540 8 228 2.17E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11520 0ddc3779cae44d1e1bfaf3f4260fee4c 262 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS11520 0ddc3779cae44d1e1bfaf3f4260fee4c 262 PANTHER PTHR24220 10 227 1.1E-82 T 23-04-2016 RR42_RS11520 0ddc3779cae44d1e1bfaf3f4260fee4c 262 Gene3D G3DSA:3.40.50.300 5 228 2.9E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11520 0ddc3779cae44d1e1bfaf3f4260fee4c 262 Pfam PF00005 ABC transporter 24 167 6.8E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS11520 0ddc3779cae44d1e1bfaf3f4260fee4c 262 TIGRFAM TIGR03864 PQQ_ABC_ATP: ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system 8 243 6.2E-101 T 23-04-2016 IPR022467 ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system RR42_RS02615 f36093331fd5eb4cbabd991c9e5e8d36 276 Pfam PF11227 Protein of unknown function (DUF3025) 56 271 4.8E-73 T 23-04-2016 IPR021390 Protein of unknown function DUF3025 RR42_RS19260 9f9294846115eff0b62ce0c50ff8816b 163 SMART SM00903 17 160 9.7E-47 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 RR42_RS19260 9f9294846115eff0b62ce0c50ff8816b 163 PANTHER PTHR30466 9 163 4.0E-30 T 23-04-2016 RR42_RS19260 9f9294846115eff0b62ce0c50ff8816b 163 SUPERFAMILY SSF50475 8 161 2.45E-41 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RR42_RS19260 9f9294846115eff0b62ce0c50ff8816b 163 PANTHER PTHR30466:SF2 9 163 4.0E-30 T 23-04-2016 RR42_RS19260 9f9294846115eff0b62ce0c50ff8816b 163 Pfam PF01613 Flavin reductase like domain 18 161 4.9E-31 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 RR42_RS19260 9f9294846115eff0b62ce0c50ff8816b 163 Gene3D G3DSA:2.30.110.10 7 159 2.2E-46 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RR42_RS01955 6c665f7fbd6ac7cd99a1c6a2725c0c59 439 SUPERFAMILY SSF53850 67 300 5.43E-30 T 23-04-2016 RR42_RS01955 6c665f7fbd6ac7cd99a1c6a2725c0c59 439 PANTHER PTHR30024 30 438 7.5E-147 T 23-04-2016 RR42_RS01955 6c665f7fbd6ac7cd99a1c6a2725c0c59 439 Pfam PF13379 NMT1-like family 63 313 3.0E-107 T 23-04-2016 RR42_RS01955 6c665f7fbd6ac7cd99a1c6a2725c0c59 439 PANTHER PTHR30024:SF7 30 438 7.5E-147 T 23-04-2016 RR42_RS01955 6c665f7fbd6ac7cd99a1c6a2725c0c59 439 Gene3D G3DSA:3.40.190.10 192 290 2.4E-8 T 23-04-2016 RR42_RS08240 44806e0ac38845db6d7460a8b08d63ed 461 Pfam PF13264 Domain of unknown function (DUF4055) 249 383 4.2E-36 T 23-04-2016 IPR025129 Domain of unknown function DUF4055 RR42_RS20630 e3f175f30335b416916903b1cf97486f 224 Gene3D G3DSA:1.10.10.10 124 219 7.0E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS20630 e3f175f30335b416916903b1cf97486f 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 218 1.4E-17 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS20630 e3f175f30335b416916903b1cf97486f 224 SMART SM00862 145 218 3.8E-18 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS20630 e3f175f30335b416916903b1cf97486f 224 SUPERFAMILY SSF52172 2 161 3.27E-36 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS20630 e3f175f30335b416916903b1cf97486f 224 PANTHER PTHR26402:SF316 1 221 1.2E-72 T 23-04-2016 RR42_RS20630 e3f175f30335b416916903b1cf97486f 224 Pfam PF00072 Response regulator receiver domain 4 112 2.0E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS20630 e3f175f30335b416916903b1cf97486f 224 Gene3D G3DSA:3.40.50.2300 2 121 3.1E-35 T 23-04-2016 RR42_RS20630 e3f175f30335b416916903b1cf97486f 224 SUPERFAMILY SSF46894 127 219 2.55E-16 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS20630 e3f175f30335b416916903b1cf97486f 224 SMART SM00448 1 112 3.2E-35 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS20630 e3f175f30335b416916903b1cf97486f 224 PANTHER PTHR26402 1 221 1.2E-72 T 23-04-2016 RR42_RS16730 bde7882c408b41aad1a9312a511cdeb8 362 SUPERFAMILY SSF55874 224 312 1.3E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS16730 bde7882c408b41aad1a9312a511cdeb8 362 PANTHER PTHR34220 37 344 1.4E-47 T 23-04-2016 RR42_RS16730 bde7882c408b41aad1a9312a511cdeb8 362 Gene3D G3DSA:3.30.565.10 223 313 3.3E-11 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS16730 bde7882c408b41aad1a9312a511cdeb8 362 Pfam PF06580 Histidine kinase 167 245 5.4E-18 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 RR42_RS11990 2b6116dcdb2ea7d7634afe6381fb4b4c 515 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 77 99 - T 23-04-2016 IPR023765 Solute-binding protein family 5, conserved site RR42_RS11990 2b6116dcdb2ea7d7634afe6381fb4b4c 515 Gene3D G3DSA:3.40.190.10 133 281 1.6E-45 T 23-04-2016 RR42_RS11990 2b6116dcdb2ea7d7634afe6381fb4b4c 515 PANTHER PTHR30290 24 514 5.2E-244 T 23-04-2016 RR42_RS11990 2b6116dcdb2ea7d7634afe6381fb4b4c 515 PIRSF PIRSF002741 7 515 3.1E-106 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RR42_RS11990 2b6116dcdb2ea7d7634afe6381fb4b4c 515 SUPERFAMILY SSF53850 32 513 1.09E-136 T 23-04-2016 RR42_RS11990 2b6116dcdb2ea7d7634afe6381fb4b4c 515 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 72 429 1.2E-91 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain RR42_RS11990 2b6116dcdb2ea7d7634afe6381fb4b4c 515 PANTHER PTHR30290:SF32 24 514 5.2E-244 T 23-04-2016 RR42_RS11990 2b6116dcdb2ea7d7634afe6381fb4b4c 515 Gene3D G3DSA:3.10.105.10 282 483 1.4E-55 T 23-04-2016 RR42_RS05605 f53c433b58c1eb0a1b2e3ed2fb3eb3ac 149 Gene3D G3DSA:3.10.129.10 2 148 3.3E-42 T 23-04-2016 IPR029069 HotDog domain RR42_RS05605 f53c433b58c1eb0a1b2e3ed2fb3eb3ac 149 SUPERFAMILY SSF54637 3 148 1.38E-38 T 23-04-2016 IPR029069 HotDog domain RR42_RS05605 f53c433b58c1eb0a1b2e3ed2fb3eb3ac 149 Pfam PF01575 MaoC like domain 19 113 3.5E-18 T 23-04-2016 IPR002539 MaoC-like domain RR42_RS05605 f53c433b58c1eb0a1b2e3ed2fb3eb3ac 149 PANTHER PTHR13078 1 148 2.9E-39 T 23-04-2016 RR42_RS13495 bfa9fe632b7658377b1946c5c7da941f 165 SMART SM01103 6 89 5.4E-36 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 RR42_RS13495 bfa9fe632b7658377b1946c5c7da941f 165 PANTHER PTHR31846 4 90 1.4E-15 T 23-04-2016 RR42_RS13495 bfa9fe632b7658377b1946c5c7da941f 165 SUPERFAMILY SSF75471 6 92 7.59E-24 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 RR42_RS13495 bfa9fe632b7658377b1946c5c7da941f 165 Pfam PF01985 CRS1 / YhbY (CRM) domain 9 89 6.8E-16 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 RR42_RS13495 bfa9fe632b7658377b1946c5c7da941f 165 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 14 93 1.0E-36 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 RR42_RS13495 bfa9fe632b7658377b1946c5c7da941f 165 Gene3D G3DSA:3.30.110.60 6 92 2.5E-25 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 RR42_RS10325 83c5e6b8965866810748624b289a2898 690 Pfam PF01968 Hydantoinase/oxoprolinase 204 495 1.3E-77 T 23-04-2016 IPR002821 Hydantoinase/oxoprolinase GO:0016787 RR42_RS10325 83c5e6b8965866810748624b289a2898 690 SUPERFAMILY SSF53067 68 99 6.64E-6 T 23-04-2016 RR42_RS10325 83c5e6b8965866810748624b289a2898 690 SUPERFAMILY SSF53067 3 32 6.64E-6 T 23-04-2016 RR42_RS10325 83c5e6b8965866810748624b289a2898 690 SUPERFAMILY SSF53067 263 341 6.64E-6 T 23-04-2016 RR42_RS10325 83c5e6b8965866810748624b289a2898 690 SUPERFAMILY SSF53067 400 490 6.64E-6 T 23-04-2016 RR42_RS10325 83c5e6b8965866810748624b289a2898 690 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 2 183 2.0E-41 T 23-04-2016 IPR008040 Hydantoinaseoxoprolinase, N-terminal RR42_RS10325 83c5e6b8965866810748624b289a2898 690 PANTHER PTHR11365 1 690 1.8E-150 T 23-04-2016 RR42_RS15985 e7d3a16791ca382ce4e3bcea9f74afda 72 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 1 70 2.5E-14 T 23-04-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing RR42_RS15985 e7d3a16791ca382ce4e3bcea9f74afda 72 PIRSF PIRSF036704 1 71 5.9E-16 T 23-04-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing RR42_RS09615 754be0e314cf21d88eb665e6ad681fbf 161 Pfam PF09361 Phasin protein 13 102 1.8E-7 T 23-04-2016 IPR018968 Phasin RR42_RS12550 7a8201fe13704480ec5e7712300e0b84 126 PANTHER PTHR21192 17 122 1.5E-29 T 23-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein RR42_RS12550 7a8201fe13704480ec5e7712300e0b84 126 SUPERFAMILY SSF64076 2 122 2.35E-37 T 23-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein RR42_RS12550 7a8201fe13704480ec5e7712300e0b84 126 PANTHER PTHR21192:SF3 17 122 1.5E-29 T 23-04-2016 RR42_RS12550 7a8201fe13704480ec5e7712300e0b84 126 Gene3D G3DSA:3.40.1230.10 1 123 1.8E-46 T 23-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein RR42_RS12550 7a8201fe13704480ec5e7712300e0b84 126 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 14 121 1.3E-33 T 23-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein RR42_RS24330 4e45c995477b04778758f3122d8a905d 248 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 4 158 9.5E-62 T 23-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset RR42_RS24330 4e45c995477b04778758f3122d8a905d 248 SUPERFAMILY SSF69349 100 153 5.81E-9 T 23-04-2016 RR42_RS24330 4e45c995477b04778758f3122d8a905d 248 Gene3D G3DSA:2.40.50.230 29 109 2.8E-35 T 23-04-2016 IPR006531 Gp5 N-terminal RR42_RS24330 4e45c995477b04778758f3122d8a905d 248 PANTHER PTHR32305 1 138 6.4E-50 T 23-04-2016 RR42_RS24330 4e45c995477b04778758f3122d8a905d 248 PANTHER PTHR32305:SF9 1 138 6.4E-50 T 23-04-2016 RR42_RS24330 4e45c995477b04778758f3122d8a905d 248 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 8 160 6.9E-55 T 23-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein RR42_RS24330 4e45c995477b04778758f3122d8a905d 248 SUPERFAMILY SSF69255 22 109 1.07E-30 T 23-04-2016 RR42_RS24330 4e45c995477b04778758f3122d8a905d 248 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 133 240 6.1E-32 T 23-04-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain RR42_RS05730 1f8eaf37d5168732ffddf0227ca4ea15 206 Gene3D G3DSA:1.10.1740.10 18 132 1.9E-22 T 23-04-2016 RR42_RS05730 1f8eaf37d5168732ffddf0227ca4ea15 206 Pfam PF04545 Sigma-70, region 4 145 194 6.3E-12 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS05730 1f8eaf37d5168732ffddf0227ca4ea15 206 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 39 196 1.2E-28 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS05730 1f8eaf37d5168732ffddf0227ca4ea15 206 Gene3D G3DSA:1.10.10.10 137 197 9.1E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS05730 1f8eaf37d5168732ffddf0227ca4ea15 206 SUPERFAMILY SSF88946 18 121 7.46E-19 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS05730 1f8eaf37d5168732ffddf0227ca4ea15 206 PANTHER PTHR30173:SF29 13 200 1.4E-60 T 23-04-2016 RR42_RS05730 1f8eaf37d5168732ffddf0227ca4ea15 206 PANTHER PTHR30173 13 200 1.4E-60 T 23-04-2016 RR42_RS05730 1f8eaf37d5168732ffddf0227ca4ea15 206 SUPERFAMILY SSF88659 123 198 4.86E-14 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS05730 1f8eaf37d5168732ffddf0227ca4ea15 206 Pfam PF04542 Sigma-70 region 2 41 106 6.8E-13 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS15205 0cbc41c6057c50e8d4c5a84e27e199e4 206 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 12 206 1.2E-78 T 23-04-2016 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent RR42_RS15205 0cbc41c6057c50e8d4c5a84e27e199e4 206 PANTHER PTHR30212 9 201 8.9E-75 T 23-04-2016 RR42_RS15205 0cbc41c6057c50e8d4c5a84e27e199e4 206 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 32 123 3.7E-13 T 23-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RR42_RS15205 0cbc41c6057c50e8d4c5a84e27e199e4 206 Gene3D G3DSA:2.30.110.10 27 149 2.1E-21 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RR42_RS15205 0cbc41c6057c50e8d4c5a84e27e199e4 206 PANTHER PTHR30212:SF4 9 201 8.9E-75 T 23-04-2016 RR42_RS15205 0cbc41c6057c50e8d4c5a84e27e199e4 206 SUPERFAMILY SSF50475 27 165 1.32E-17 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RR42_RS03450 3281c2435c5778d6462196ff7fbb8f56 269 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 4 261 41.282 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RR42_RS03450 3281c2435c5778d6462196ff7fbb8f56 269 SUPERFAMILY SSF53448 6 265 8.08E-59 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RR42_RS03450 3281c2435c5778d6462196ff7fbb8f56 269 Gene3D G3DSA:3.90.550.10 6 262 2.6E-78 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RR42_RS03450 3281c2435c5778d6462196ff7fbb8f56 269 PANTHER PTHR21485:SF4 6 262 4.2E-103 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RR42_RS03450 3281c2435c5778d6462196ff7fbb8f56 269 PANTHER PTHR21485 6 262 4.2E-103 T 23-04-2016 RR42_RS03450 3281c2435c5778d6462196ff7fbb8f56 269 Pfam PF02348 Cytidylyltransferase 8 234 2.4E-52 T 23-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RR42_RS03450 3281c2435c5778d6462196ff7fbb8f56 269 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 5 254 1.5E-84 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RR42_RS17155 79ffe652c9dd76611b25cfb232e2179a 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 2.0E-64 T 23-04-2016 IPR007551 Protein of unknown function DUF520 RR42_RS17155 79ffe652c9dd76611b25cfb232e2179a 161 SUPERFAMILY SSF89963 2 87 2.3E-30 T 23-04-2016 IPR007551 Protein of unknown function DUF520 RR42_RS17155 79ffe652c9dd76611b25cfb232e2179a 161 SUPERFAMILY SSF89963 89 161 2.22E-27 T 23-04-2016 IPR007551 Protein of unknown function DUF520 RR42_RS17155 79ffe652c9dd76611b25cfb232e2179a 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 27.74 T 23-04-2016 IPR007551 Protein of unknown function DUF520 RR42_RS17155 79ffe652c9dd76611b25cfb232e2179a 161 PANTHER PTHR30476 1 161 8.0E-72 T 23-04-2016 RR42_RS17155 79ffe652c9dd76611b25cfb232e2179a 161 Gene3D G3DSA:3.30.70.860 95 161 3.3E-32 T 23-04-2016 RR42_RS17155 79ffe652c9dd76611b25cfb232e2179a 161 PANTHER PTHR30476:SF0 1 161 8.0E-72 T 23-04-2016 RR42_RS17155 79ffe652c9dd76611b25cfb232e2179a 161 Gene3D G3DSA:3.30.70.990 9 94 2.0E-31 T 23-04-2016 RR42_RS07740 d9de21f17c51d42a442bb77234de48da 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 216 2.8E-21 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS07740 d9de21f17c51d42a442bb77234de48da 219 Gene3D G3DSA:1.10.10.10 124 218 9.5E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS07740 d9de21f17c51d42a442bb77234de48da 219 SMART SM00862 145 216 6.0E-24 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS07740 d9de21f17c51d42a442bb77234de48da 219 PANTHER PTHR26402:SF578 1 219 8.3E-78 T 23-04-2016 RR42_RS07740 d9de21f17c51d42a442bb77234de48da 219 SUPERFAMILY SSF52172 1 178 3.52E-38 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS07740 d9de21f17c51d42a442bb77234de48da 219 Pfam PF00072 Response regulator receiver domain 3 112 2.7E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS07740 d9de21f17c51d42a442bb77234de48da 219 SMART SM00448 1 112 1.9E-33 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS07740 d9de21f17c51d42a442bb77234de48da 219 PANTHER PTHR26402 1 219 8.3E-78 T 23-04-2016 RR42_RS07740 d9de21f17c51d42a442bb77234de48da 219 Gene3D G3DSA:3.40.50.2300 1 121 1.2E-34 T 23-04-2016 RR42_RS00825 2d7e9fa651710490e959795ab8e2298c 597 SUPERFAMILY SSF47323 466 597 1.44E-32 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS00825 2d7e9fa651710490e959795ab8e2298c 597 SMART SM00836 471 597 3.8E-47 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RR42_RS00825 2d7e9fa651710490e959795ab8e2298c 597 Hamap MF_00123 Arginine--tRNA ligase [argS]. 7 597 24.704 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RR42_RS00825 2d7e9fa651710490e959795ab8e2298c 597 Gene3D G3DSA:3.30.1360.70 7 114 7.0E-29 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RR42_RS00825 2d7e9fa651710490e959795ab8e2298c 597 PANTHER PTHR11956:SF6 1 597 1.0E-207 T 23-04-2016 RR42_RS00825 2d7e9fa651710490e959795ab8e2298c 597 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 7 597 3.0E-120 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RR42_RS00825 2d7e9fa651710490e959795ab8e2298c 597 Pfam PF00750 tRNA synthetases class I (R) 105 406 3.6E-21 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RR42_RS00825 2d7e9fa651710490e959795ab8e2298c 597 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 134 143 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS00825 2d7e9fa651710490e959795ab8e2298c 597 Pfam PF05746 DALR anticodon binding domain 471 597 1.5E-32 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RR42_RS00825 2d7e9fa651710490e959795ab8e2298c 597 Gene3D G3DSA:1.10.730.10 476 597 6.3E-41 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS00825 2d7e9fa651710490e959795ab8e2298c 597 SUPERFAMILY SSF55190 9 115 1.57E-22 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RR42_RS00825 2d7e9fa651710490e959795ab8e2298c 597 Gene3D G3DSA:3.40.50.620 123 475 3.6E-108 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS00825 2d7e9fa651710490e959795ab8e2298c 597 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 8 95 1.3E-21 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RR42_RS00825 2d7e9fa651710490e959795ab8e2298c 597 PANTHER PTHR11956 1 597 1.0E-207 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RR42_RS00825 2d7e9fa651710490e959795ab8e2298c 597 SUPERFAMILY SSF52374 123 406 1.44E-80 T 23-04-2016 RR42_RS00825 2d7e9fa651710490e959795ab8e2298c 597 SUPERFAMILY SSF52374 433 481 1.44E-80 T 23-04-2016 RR42_RS00825 2d7e9fa651710490e959795ab8e2298c 597 SMART SM01016 7 95 3.2E-30 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RR42_RS00825 2d7e9fa651710490e959795ab8e2298c 597 PRINTS PR01038 Arginyl-tRNA synthetase signature 139 155 3.1E-22 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RR42_RS00825 2d7e9fa651710490e959795ab8e2298c 597 PRINTS PR01038 Arginyl-tRNA synthetase signature 312 333 3.1E-22 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RR42_RS00825 2d7e9fa651710490e959795ab8e2298c 597 PRINTS PR01038 Arginyl-tRNA synthetase signature 124 139 3.1E-22 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RR42_RS00825 2d7e9fa651710490e959795ab8e2298c 597 PRINTS PR01038 Arginyl-tRNA synthetase signature 163 176 3.1E-22 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RR42_RS01935 d3d78d9ec206e1d143f0fb09d802bd66 291 Pfam PF05726 Pirin C-terminal cupin domain 176 274 1.2E-22 T 23-04-2016 IPR008778 Pirin, C-terminal domain RR42_RS01935 d3d78d9ec206e1d143f0fb09d802bd66 291 PIRSF PIRSF006232 1 283 8.3E-91 T 23-04-2016 IPR012093 Pirin RR42_RS01935 d3d78d9ec206e1d143f0fb09d802bd66 291 SUPERFAMILY SSF51182 4 286 1.8E-81 T 23-04-2016 IPR011051 RmlC-like cupin domain RR42_RS01935 d3d78d9ec206e1d143f0fb09d802bd66 291 Pfam PF02678 Pirin 20 123 2.3E-36 T 23-04-2016 IPR003829 Pirin, N-terminal domain RR42_RS01935 d3d78d9ec206e1d143f0fb09d802bd66 291 Gene3D G3DSA:2.60.120.10 7 245 1.1E-71 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS01935 d3d78d9ec206e1d143f0fb09d802bd66 291 PANTHER PTHR13903 4 289 5.0E-114 T 23-04-2016 IPR012093 Pirin RR42_RS01935 d3d78d9ec206e1d143f0fb09d802bd66 291 PANTHER PTHR13903:SF4 4 289 5.0E-114 T 23-04-2016 RR42_RS03580 da910247d2006236f6ccf846eccbdf6d 370 Pfam PF09850 Type VI secretion system protein DotU 2 203 7.6E-63 T 23-04-2016 IPR017732 Type IV / VI secretion system, DotU RR42_RS03580 da910247d2006236f6ccf846eccbdf6d 370 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 232 368 7.2E-49 T 23-04-2016 IPR017733 Type VI secretion system peptidoglycan-associated domain RR42_RS03580 da910247d2006236f6ccf846eccbdf6d 370 SUPERFAMILY SSF103088 241 368 2.62E-29 T 23-04-2016 IPR006665 OmpA-like domain RR42_RS03580 da910247d2006236f6ccf846eccbdf6d 370 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 2 206 3.5E-64 T 23-04-2016 IPR017732 Type IV / VI secretion system, DotU RR42_RS03580 da910247d2006236f6ccf846eccbdf6d 370 PANTHER PTHR30128:SF2 2 370 6.6E-64 T 23-04-2016 RR42_RS03580 da910247d2006236f6ccf846eccbdf6d 370 Gene3D G3DSA:3.30.1330.60 243 368 3.9E-30 T 23-04-2016 IPR006665 OmpA-like domain RR42_RS03580 da910247d2006236f6ccf846eccbdf6d 370 Pfam PF00691 OmpA family 265 362 1.6E-17 T 23-04-2016 IPR006665 OmpA-like domain RR42_RS03580 da910247d2006236f6ccf846eccbdf6d 370 PANTHER PTHR30128 2 370 6.6E-64 T 23-04-2016 RR42_RS15125 3b7115f1e0d56324597e59d92d2c26a0 257 Gene3D G3DSA:3.40.225.10 21 233 1.9E-61 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal RR42_RS15125 3b7115f1e0d56324597e59d92d2c26a0 257 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 27 206 4.5E-46 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal RR42_RS15125 3b7115f1e0d56324597e59d92d2c26a0 257 SMART SM01007 26 206 5.7E-61 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal RR42_RS15125 3b7115f1e0d56324597e59d92d2c26a0 257 SUPERFAMILY SSF53639 20 231 2.94E-62 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal RR42_RS15125 3b7115f1e0d56324597e59d92d2c26a0 257 PANTHER PTHR10672 18 256 3.4E-97 T 23-04-2016 RR42_RS04570 2c71b726033e9e20cce0e0e8586dbd4f 249 PANTHER PTHR21294 1 249 3.4E-156 T 23-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 RR42_RS04570 2c71b726033e9e20cce0e0e8586dbd4f 249 Pfam PF01012 Electron transfer flavoprotein domain 29 206 5.5E-44 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RR42_RS04570 2c71b726033e9e20cce0e0e8586dbd4f 249 SUPERFAMILY SSF52402 1 242 1.33E-85 T 23-04-2016 RR42_RS04570 2c71b726033e9e20cce0e0e8586dbd4f 249 SMART SM00893 23 211 3.3E-67 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RR42_RS04570 2c71b726033e9e20cce0e0e8586dbd4f 249 Gene3D G3DSA:3.40.50.620 1 247 5.3E-104 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS04570 2c71b726033e9e20cce0e0e8586dbd4f 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 23-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 RR42_RS04570 2c71b726033e9e20cce0e0e8586dbd4f 249 PANTHER PTHR21294:SF8 1 249 3.4E-156 T 23-04-2016 RR42_RS04570 2c71b726033e9e20cce0e0e8586dbd4f 249 PIRSF PIRSF000090 1 249 2.3E-86 T 23-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 RR42_RS12355 b1d877cc8be1b7b88d7f3addfb6c5ef9 300 PANTHER PTHR30427 3 298 1.0E-64 T 23-04-2016 RR42_RS12355 b1d877cc8be1b7b88d7f3addfb6c5ef9 300 Gene3D G3DSA:3.40.190.10 181 262 2.8E-14 T 23-04-2016 RR42_RS12355 b1d877cc8be1b7b88d7f3addfb6c5ef9 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.5E-12 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS12355 b1d877cc8be1b7b88d7f3addfb6c5ef9 300 Gene3D G3DSA:3.40.190.10 94 180 6.0E-20 T 23-04-2016 RR42_RS12355 b1d877cc8be1b7b88d7f3addfb6c5ef9 300 Gene3D G3DSA:1.10.10.10 6 88 1.3E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS12355 b1d877cc8be1b7b88d7f3addfb6c5ef9 300 SUPERFAMILY SSF53850 94 296 1.09E-36 T 23-04-2016 RR42_RS12355 b1d877cc8be1b7b88d7f3addfb6c5ef9 300 Pfam PF03466 LysR substrate binding domain 93 294 4.0E-36 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS12355 b1d877cc8be1b7b88d7f3addfb6c5ef9 300 SUPERFAMILY SSF46785 5 114 2.07E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS09435 725b9199721c53f6ad3cc4d2857772b8 187 Pfam PF03167 Uracil DNA glycosylase superfamily 19 162 1.3E-22 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RR42_RS09435 725b9199721c53f6ad3cc4d2857772b8 187 PANTHER PTHR12159 16 174 8.9E-52 T 23-04-2016 IPR015637 G/U mismatch-specific DNA glycosylase GO:0006281|GO:0019104 RR42_RS09435 725b9199721c53f6ad3cc4d2857772b8 187 Gene3D G3DSA:3.40.470.10 16 175 3.1E-52 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RR42_RS09435 725b9199721c53f6ad3cc4d2857772b8 187 SMART SM00986 17 175 1.9E-4 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RR42_RS09435 725b9199721c53f6ad3cc4d2857772b8 187 SUPERFAMILY SSF52141 16 175 8.5E-42 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RR42_RS09435 725b9199721c53f6ad3cc4d2857772b8 187 SMART SM00987 17 175 1.9E-4 T 23-04-2016 RR42_RS17160 2499b53e6549f882027794ed5c214b0e 338 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 338 80.497 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS17160 2499b53e6549f882027794ed5c214b0e 338 Pfam PF01565 FAD binding domain 24 154 2.5E-21 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RR42_RS17160 2499b53e6549f882027794ed5c214b0e 338 PANTHER PTHR21071 3 337 1.4E-140 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS17160 2499b53e6549f882027794ed5c214b0e 338 Gene3D G3DSA:3.90.78.10 239 338 1.4E-37 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS17160 2499b53e6549f882027794ed5c214b0e 338 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 10 334 5.0E-69 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS17160 2499b53e6549f882027794ed5c214b0e 338 Gene3D G3DSA:3.30.43.10 8 72 1.1E-22 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RR42_RS17160 2499b53e6549f882027794ed5c214b0e 338 SUPERFAMILY SSF56194 213 338 3.27E-43 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS17160 2499b53e6549f882027794ed5c214b0e 338 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 215 337 7.0E-32 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS17160 2499b53e6549f882027794ed5c214b0e 338 PANTHER PTHR21071:SF6 3 337 1.4E-140 T 23-04-2016 RR42_RS17160 2499b53e6549f882027794ed5c214b0e 338 Gene3D G3DSA:3.30.465.10 80 238 4.7E-52 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RR42_RS17160 2499b53e6549f882027794ed5c214b0e 338 SUPERFAMILY SSF56176 8 196 1.14E-43 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RR42_RS08875 0a345b6aac2fb109514533db1e4e7c9d 149 Gene3D G3DSA:1.10.10.10 1 133 1.1E-38 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS08875 0a345b6aac2fb109514533db1e4e7c9d 149 PANTHER PTHR33221 2 131 1.7E-35 T 23-04-2016 RR42_RS08875 0a345b6aac2fb109514533db1e4e7c9d 149 SUPERFAMILY SSF46785 2 132 3.04E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS08875 0a345b6aac2fb109514533db1e4e7c9d 149 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 5.1E-29 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type RR42_RS08875 0a345b6aac2fb109514533db1e4e7c9d 149 Pfam PF02082 Transcriptional regulator 1 82 6.2E-25 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type RR42_RS08875 0a345b6aac2fb109514533db1e4e7c9d 149 PANTHER PTHR33221:SF4 2 131 1.7E-35 T 23-04-2016 RR42_RS19540 b9b7bd1c6e83a0524984cf7c8962234e 1197 PANTHER PTHR18968:SF134 359 782 1.3E-188 T 23-04-2016 RR42_RS19540 b9b7bd1c6e83a0524984cf7c8962234e 1197 Gene3D G3DSA:3.40.50.970 514 685 1.1E-9 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS19540 b9b7bd1c6e83a0524984cf7c8962234e 1197 SUPERFAMILY SSF53323 746 946 8.76E-31 T 23-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 RR42_RS19540 b9b7bd1c6e83a0524984cf7c8962234e 1197 SUPERFAMILY SSF52518 461 648 1.28E-15 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS19540 b9b7bd1c6e83a0524984cf7c8962234e 1197 Gene3D G3DSA:3.40.50.970 115 230 1.4E-4 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS19540 b9b7bd1c6e83a0524984cf7c8962234e 1197 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 481 628 1.7E-7 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RR42_RS19540 b9b7bd1c6e83a0524984cf7c8962234e 1197 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 754 940 1.2E-22 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RR42_RS19540 b9b7bd1c6e83a0524984cf7c8962234e 1197 PANTHER PTHR18968 359 782 1.3E-188 T 23-04-2016 RR42_RS19540 b9b7bd1c6e83a0524984cf7c8962234e 1197 SUPERFAMILY SSF52518 32 215 1.0E-19 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS19540 b9b7bd1c6e83a0524984cf7c8962234e 1197 Gene3D G3DSA:3.40.920.10 748 945 3.3E-15 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RR42_RS11920 99990ffe8ca3582985e47e85494d504b 273 Gene3D G3DSA:1.10.620.20 27 181 7.2E-13 T 23-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 RR42_RS11920 99990ffe8ca3582985e47e85494d504b 273 SUPERFAMILY SSF47240 6 188 8.6E-41 T 23-04-2016 IPR009078 Ferritin-like superfamily RR42_RS00395 a2cda24d7a5349600d760ccc07c0484f 293 Gene3D G3DSA:2.60.120.10 52 128 6.3E-12 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS00395 a2cda24d7a5349600d760ccc07c0484f 293 Gene3D G3DSA:1.10.10.60 248 291 5.4E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS00395 a2cda24d7a5349600d760ccc07c0484f 293 Pfam PF02311 AraC-like ligand binding domain 62 141 8.5E-9 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RR42_RS00395 a2cda24d7a5349600d760ccc07c0484f 293 SMART SM00342 210 292 1.7E-23 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RR42_RS00395 a2cda24d7a5349600d760ccc07c0484f 293 SUPERFAMILY SSF51182 54 219 6.67E-18 T 23-04-2016 IPR011051 RmlC-like cupin domain RR42_RS00395 a2cda24d7a5349600d760ccc07c0484f 293 PANTHER PTHR11019 47 291 1.6E-74 T 23-04-2016 RR42_RS00395 a2cda24d7a5349600d760ccc07c0484f 293 PANTHER PTHR11019:SF138 47 291 1.6E-74 T 23-04-2016 RR42_RS00395 a2cda24d7a5349600d760ccc07c0484f 293 Pfam PF12833 Helix-turn-helix domain 218 292 2.0E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RR42_RS00395 a2cda24d7a5349600d760ccc07c0484f 293 SUPERFAMILY SSF46689 247 291 8.51E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS00395 a2cda24d7a5349600d760ccc07c0484f 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 276 1.2E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RR42_RS00395 a2cda24d7a5349600d760ccc07c0484f 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 276 292 1.2E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RR42_RS00395 a2cda24d7a5349600d760ccc07c0484f 293 Gene3D G3DSA:1.10.10.60 189 247 3.0E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS00395 a2cda24d7a5349600d760ccc07c0484f 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 247 288 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RR42_RS01305 8709661bd380af829314cec20937ac43 282 Gene3D G3DSA:3.20.20.70 18 275 6.2E-52 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS01305 8709661bd380af829314cec20937ac43 282 Hamap MF_00443 Thiazole synthase [thiG]. 16 272 40.734 T 23-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 RR42_RS01305 8709661bd380af829314cec20937ac43 282 SUPERFAMILY SSF110399 15 258 3.27E-78 T 23-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 RR42_RS01305 8709661bd380af829314cec20937ac43 282 PANTHER PTHR34266 11 277 1.3E-126 T 23-04-2016 RR42_RS01305 8709661bd380af829314cec20937ac43 282 Pfam PF05690 Thiazole biosynthesis protein ThiG 19 266 3.1E-103 T 23-04-2016 RR42_RS12675 004e30cbe9cfb448a29643d8249ec2c5 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 7.4E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS12675 004e30cbe9cfb448a29643d8249ec2c5 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 416 7.4E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS12675 004e30cbe9cfb448a29643d8249ec2c5 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 7.4E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS12675 004e30cbe9cfb448a29643d8249ec2c5 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 7.4E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS12675 004e30cbe9cfb448a29643d8249ec2c5 482 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 458 4.2E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS12675 004e30cbe9cfb448a29643d8249ec2c5 482 PANTHER PTHR24423 265 456 1.1E-38 T 23-04-2016 RR42_RS12675 004e30cbe9cfb448a29643d8249ec2c5 482 PANTHER PTHR24423 221 245 1.1E-38 T 23-04-2016 RR42_RS12675 004e30cbe9cfb448a29643d8249ec2c5 482 Gene3D G3DSA:3.30.565.10 301 456 5.3E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS12675 004e30cbe9cfb448a29643d8249ec2c5 482 SUPERFAMILY SSF55874 306 457 1.22E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS12675 004e30cbe9cfb448a29643d8249ec2c5 482 Gene3D G3DSA:1.10.287.130 220 294 2.9E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS12675 004e30cbe9cfb448a29643d8249ec2c5 482 SUPERFAMILY SSF47384 221 254 3.34E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS12675 004e30cbe9cfb448a29643d8249ec2c5 482 SMART SM00387 349 459 3.1E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS12675 004e30cbe9cfb448a29643d8249ec2c5 482 Pfam PF16927 N-terminal 7TM region of histidine kinase 9 216 1.2E-13 T 23-04-2016 IPR031621 Histidine kinase, N-terminal 7TM region RR42_RS00465 180716111ed773d56b3c12efb218a767 323 Gene3D G3DSA:1.20.58.340 249 323 7.3E-19 T 23-04-2016 RR42_RS00465 180716111ed773d56b3c12efb218a767 323 Gene3D G3DSA:1.20.58.340 132 245 8.5E-37 T 23-04-2016 RR42_RS00465 180716111ed773d56b3c12efb218a767 323 SUPERFAMILY SSF143865 4 255 7.72E-66 T 23-04-2016 RR42_RS00465 180716111ed773d56b3c12efb218a767 323 Gene3D G3DSA:3.30.460.20 5 131 1.9E-34 T 23-04-2016 RR42_RS00465 180716111ed773d56b3c12efb218a767 323 PANTHER PTHR21535 10 323 9.7E-52 T 23-04-2016 RR42_RS00465 180716111ed773d56b3c12efb218a767 323 Pfam PF01544 CorA-like Mg2+ transporter protein 33 318 9.3E-62 T 23-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 RR42_RS00465 180716111ed773d56b3c12efb218a767 323 SUPERFAMILY SSF144083 259 319 1.11E-15 T 23-04-2016 RR42_RS11690 9843ad6864a2ccbbe3348b8fed4ea8a9 438 Pfam PF05139 Erythromycin esterase 69 416 5.1E-105 T 23-04-2016 IPR007815 Erythromycin esterase GO:0046677 RR42_RS11690 9843ad6864a2ccbbe3348b8fed4ea8a9 438 SUPERFAMILY SSF159501 16 422 1.57E-116 T 23-04-2016 RR42_RS11690 9843ad6864a2ccbbe3348b8fed4ea8a9 438 Gene3D G3DSA:1.20.1440.30 149 261 6.6E-5 T 23-04-2016 RR42_RS11690 9843ad6864a2ccbbe3348b8fed4ea8a9 438 Gene3D G3DSA:3.30.1870.10 68 143 2.9E-26 T 23-04-2016 RR42_RS11690 9843ad6864a2ccbbe3348b8fed4ea8a9 438 PANTHER PTHR31299:SF0 24 438 3.7E-105 T 23-04-2016 RR42_RS11690 9843ad6864a2ccbbe3348b8fed4ea8a9 438 Gene3D G3DSA:3.40.1660.10 281 422 9.0E-64 T 23-04-2016 RR42_RS11690 9843ad6864a2ccbbe3348b8fed4ea8a9 438 Gene3D G3DSA:3.40.1660.10 15 63 9.0E-64 T 23-04-2016 RR42_RS11690 9843ad6864a2ccbbe3348b8fed4ea8a9 438 PIRSF PIRSF036794 13 425 6.5E-101 T 23-04-2016 IPR014622 Uncharacterised conserved protein UCP036794, erythromycin esterase-type RR42_RS11690 9843ad6864a2ccbbe3348b8fed4ea8a9 438 PANTHER PTHR31299 24 438 3.7E-105 T 23-04-2016 RR42_RS01145 c0e26fb8f00df3e2397ed9aee34dac42 477 PANTHER PTHR30092 1 460 2.9E-136 T 23-04-2016 RR42_RS01145 c0e26fb8f00df3e2397ed9aee34dac42 477 PIRSF PIRSF004548 1 460 4.2E-136 T 23-04-2016 IPR010364 Uncharacterised protein family, inner membrane CreD RR42_RS01145 c0e26fb8f00df3e2397ed9aee34dac42 477 Pfam PF06123 Inner membrane protein CreD 5 446 1.7E-145 T 23-04-2016 IPR010364 Uncharacterised protein family, inner membrane CreD RR42_RS09130 268fab939b03b4ec139bc8f8c65a36e3 152 Gene3D G3DSA:1.10.150.120 74 150 4.2E-23 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RR42_RS09130 268fab939b03b4ec139bc8f8c65a36e3 152 Pfam PF01799 [2Fe-2S] binding domain 72 143 1.5E-20 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RR42_RS09130 268fab939b03b4ec139bc8f8c65a36e3 152 Gene3D G3DSA:3.10.20.30 3 73 8.6E-25 T 23-04-2016 IPR012675 Beta-grasp domain RR42_RS09130 268fab939b03b4ec139bc8f8c65a36e3 152 SUPERFAMILY SSF47741 72 151 7.72E-25 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RR42_RS09130 268fab939b03b4ec139bc8f8c65a36e3 152 PANTHER PTHR11908:SF82 1 136 8.9E-18 T 23-04-2016 RR42_RS09130 268fab939b03b4ec139bc8f8c65a36e3 152 SUPERFAMILY SSF54292 3 77 8.39E-23 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS09130 268fab939b03b4ec139bc8f8c65a36e3 152 PANTHER PTHR11908 1 136 8.9E-18 T 23-04-2016 RR42_RS09130 268fab939b03b4ec139bc8f8c65a36e3 152 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 54 3.1E-8 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS08560 6de4c6094b7d209de8e766f4bccdecbb 390 PANTHER PTHR35861:SF1 1 389 1.7E-111 T 23-04-2016 RR42_RS08560 6de4c6094b7d209de8e766f4bccdecbb 390 Pfam PF04984 Phage tail sheath protein 96 377 1.1E-39 T 23-04-2016 IPR007067 Tail sheath protein RR42_RS08560 6de4c6094b7d209de8e766f4bccdecbb 390 Pfam PF04984 Phage tail sheath protein 1 92 1.3E-7 T 23-04-2016 IPR007067 Tail sheath protein RR42_RS08560 6de4c6094b7d209de8e766f4bccdecbb 390 PANTHER PTHR35861 1 389 1.7E-111 T 23-04-2016 RR42_RS02040 c03ae986c107d1aea99da5814903935c 293 Gene3D G3DSA:3.20.190.10 2 153 1.6E-35 T 23-04-2016 RR42_RS02040 c03ae986c107d1aea99da5814903935c 293 PANTHER PTHR22993:SF15 1 293 7.3E-113 T 23-04-2016 RR42_RS02040 c03ae986c107d1aea99da5814903935c 293 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 293 42.748 T 23-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 RR42_RS02040 c03ae986c107d1aea99da5814903935c 293 Pfam PF06827 Zinc finger found in FPG and IleRS 265 292 4.5E-11 T 23-04-2016 IPR010663 Zinc finger, FPG/IleRS-type RR42_RS02040 c03ae986c107d1aea99da5814903935c 293 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 153 242 1.8E-19 T 23-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RR42_RS02040 c03ae986c107d1aea99da5814903935c 293 ProSitePatterns PS01242 Zinc finger FPG-type signature. 268 292 - T 23-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 RR42_RS02040 c03ae986c107d1aea99da5814903935c 293 SMART SM01232 153 245 4.2E-44 T 23-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RR42_RS02040 c03ae986c107d1aea99da5814903935c 293 Gene3D G3DSA:1.10.8.50 154 293 2.5E-48 T 23-04-2016 RR42_RS02040 c03ae986c107d1aea99da5814903935c 293 SUPERFAMILY SSF57716 241 292 5.99E-17 T 23-04-2016 RR42_RS02040 c03ae986c107d1aea99da5814903935c 293 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 292 1.1E-79 T 23-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 RR42_RS02040 c03ae986c107d1aea99da5814903935c 293 PANTHER PTHR22993 1 293 7.3E-113 T 23-04-2016 RR42_RS02040 c03ae986c107d1aea99da5814903935c 293 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 134 2.0E-32 T 23-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RR42_RS02040 c03ae986c107d1aea99da5814903935c 293 SUPERFAMILY SSF81624 2 162 4.84E-35 T 23-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RR42_RS02040 c03ae986c107d1aea99da5814903935c 293 SMART SM00898 2 135 9.3E-53 T 23-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RR42_RS02040 c03ae986c107d1aea99da5814903935c 293 SUPERFAMILY SSF46946 154 245 1.06E-26 T 23-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RR42_RS01570 b35a6970ebd57f1698e26d37be1c0769 505 Gene3D G3DSA:1.10.10.10 10 80 1.0E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS01570 b35a6970ebd57f1698e26d37be1c0769 505 PANTHER PTHR11751:SF386 89 501 2.5E-99 T 23-04-2016 RR42_RS01570 b35a6970ebd57f1698e26d37be1c0769 505 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 79 1.4E-10 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS01570 b35a6970ebd57f1698e26d37be1c0769 505 SUPERFAMILY SSF53383 116 474 3.5E-84 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS01570 b35a6970ebd57f1698e26d37be1c0769 505 Gene3D G3DSA:3.90.1150.10 367 463 5.5E-9 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS01570 b35a6970ebd57f1698e26d37be1c0769 505 SMART SM00345 20 79 8.9E-11 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS01570 b35a6970ebd57f1698e26d37be1c0769 505 Pfam PF00155 Aminotransferase class I and II 120 466 3.4E-43 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RR42_RS01570 b35a6970ebd57f1698e26d37be1c0769 505 SUPERFAMILY SSF46785 10 83 3.63E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS01570 b35a6970ebd57f1698e26d37be1c0769 505 PANTHER PTHR11751 89 501 2.5E-99 T 23-04-2016 RR42_RS01570 b35a6970ebd57f1698e26d37be1c0769 505 Gene3D G3DSA:3.40.640.10 146 364 3.1E-66 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS03350 aa237b98884d8b41bffb9f5c8ce28655 159 PANTHER PTHR10815:SF5 46 156 1.4E-44 T 23-04-2016 RR42_RS03350 aa237b98884d8b41bffb9f5c8ce28655 159 Gene3D G3DSA:1.10.10.10 71 157 9.5E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS03350 aa237b98884d8b41bffb9f5c8ce28655 159 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 73 154 1.6E-24 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RR42_RS03350 aa237b98884d8b41bffb9f5c8ce28655 159 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 120 126 - T 23-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 RR42_RS03350 aa237b98884d8b41bffb9f5c8ce28655 159 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 73 156 2.4E-29 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RR42_RS03350 aa237b98884d8b41bffb9f5c8ce28655 159 PANTHER PTHR10815 46 156 1.4E-44 T 23-04-2016 RR42_RS03350 aa237b98884d8b41bffb9f5c8ce28655 159 SUPERFAMILY SSF46767 71 156 6.15E-26 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RR42_RS03350 aa237b98884d8b41bffb9f5c8ce28655 159 SUPERFAMILY SSF53155 7 77 2.04E-11 T 23-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 RR42_RS13275 535002a1f58e53ca48335f533f2e4d0b 105 SUPERFAMILY SSF54909 1 96 4.6E-29 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RR42_RS13275 535002a1f58e53ca48335f533f2e4d0b 105 Gene3D G3DSA:3.30.70.900 1 93 7.3E-20 T 23-04-2016 RR42_RS13275 535002a1f58e53ca48335f533f2e4d0b 105 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 4.5E-16 T 23-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain RR42_RS04830 ce59a3c5ce010b42e17a7c7bb94a3444 525 SUPERFAMILY SSF53720 19 519 1.44E-103 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RR42_RS04830 ce59a3c5ce010b42e17a7c7bb94a3444 525 Gene3D G3DSA:3.40.309.10 267 455 4.3E-55 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RR42_RS04830 ce59a3c5ce010b42e17a7c7bb94a3444 525 Pfam PF00171 Aldehyde dehydrogenase family 20 466 5.4E-49 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RR42_RS04830 ce59a3c5ce010b42e17a7c7bb94a3444 525 Gene3D G3DSA:3.40.605.10 5 265 3.0E-46 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RR42_RS04830 ce59a3c5ce010b42e17a7c7bb94a3444 525 PANTHER PTHR11699:SF10 1 520 9.9E-142 T 23-04-2016 RR42_RS04830 ce59a3c5ce010b42e17a7c7bb94a3444 525 PANTHER PTHR11699 1 520 9.9E-142 T 23-04-2016 RR42_RS11440 93a8d3e82539bfb9d35810cd8c36de84 159 TIGRFAM TIGR04494 c550_PedF: cytochrome c-550 PedF 14 159 2.3E-62 T 23-04-2016 IPR030991 Cytochrome c-550 PedF RR42_RS11440 93a8d3e82539bfb9d35810cd8c36de84 159 Gene3D G3DSA:1.10.760.10 58 158 1.2E-19 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS11440 93a8d3e82539bfb9d35810cd8c36de84 159 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 63 154 2.0E-12 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS11440 93a8d3e82539bfb9d35810cd8c36de84 159 SUPERFAMILY SSF46626 5 156 1.23E-16 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS11325 33ce2084674f3de800ca8248186c77c0 820 Gene3D G3DSA:1.10.439.10 35 201 2.5E-62 T 23-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 RR42_RS11325 33ce2084674f3de800ca8248186c77c0 820 SUPERFAMILY SSF56235 45 816 3.09E-236 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RR42_RS11325 33ce2084674f3de800ca8248186c77c0 820 PANTHER PTHR34218 1 818 2.0E-278 T 23-04-2016 RR42_RS11325 33ce2084674f3de800ca8248186c77c0 820 Gene3D G3DSA:2.30.120.10 332 407 4.0E-26 T 23-04-2016 RR42_RS11325 33ce2084674f3de800ca8248186c77c0 820 PANTHER PTHR34218:SF2 1 818 2.0E-278 T 23-04-2016 RR42_RS11325 33ce2084674f3de800ca8248186c77c0 820 Gene3D G3DSA:3.60.20.10 204 331 2.4E-110 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RR42_RS11325 33ce2084674f3de800ca8248186c77c0 820 Gene3D G3DSA:3.60.20.10 417 606 2.4E-110 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RR42_RS11325 33ce2084674f3de800ca8248186c77c0 820 PIRSF PIRSF001227 9 817 1.4E-205 T 23-04-2016 IPR014395 Penicillin acylase GO:0016811 RR42_RS11325 33ce2084674f3de800ca8248186c77c0 820 Pfam PF01804 Penicillin amidase 49 798 2.8E-234 T 23-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 RR42_RS21605 933743d2661071356356727c5d675815 135 SUPERFAMILY SSF52540 2 135 2.45E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS21605 933743d2661071356356727c5d675815 135 PANTHER PTHR24220:SF483 1 135 5.5E-57 T 23-04-2016 RR42_RS21605 933743d2661071356356727c5d675815 135 Gene3D G3DSA:3.40.50.300 2 135 2.0E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS21605 933743d2661071356356727c5d675815 135 PANTHER PTHR24220 1 135 5.5E-57 T 23-04-2016 RR42_RS21605 933743d2661071356356727c5d675815 135 Pfam PF00005 ABC transporter 2 135 2.0E-23 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS16240 178566c6ddd3a82a92ea363f3202d421 134 PANTHER PTHR33542 1 119 1.7E-18 T 23-04-2016 RR42_RS16240 178566c6ddd3a82a92ea363f3202d421 134 Pfam PF01903 CbiX 16 120 2.6E-23 T 23-04-2016 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377|UniPathway: UPA00148 RR42_RS16240 178566c6ddd3a82a92ea363f3202d421 134 SUPERFAMILY SSF53800 9 122 1.44E-28 T 23-04-2016 RR42_RS16240 178566c6ddd3a82a92ea363f3202d421 134 Gene3D G3DSA:3.40.50.1400 9 129 9.6E-32 T 23-04-2016 RR42_RS13630 bea1a2d38a9d4dad9eb7eb90c5dfc386 764 SMART SM01008 20 125 3.2E-49 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RR42_RS13630 bea1a2d38a9d4dad9eb7eb90c5dfc386 764 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 142 694 1.4E-151 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS13630 bea1a2d38a9d4dad9eb7eb90c5dfc386 764 Gene3D G3DSA:3.30.365.10 276 350 1.4E-33 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS13630 bea1a2d38a9d4dad9eb7eb90c5dfc386 764 Gene3D G3DSA:3.30.365.10 114 167 1.4E-33 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS13630 bea1a2d38a9d4dad9eb7eb90c5dfc386 764 Gene3D G3DSA:3.30.365.10 610 758 1.1E-63 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS13630 bea1a2d38a9d4dad9eb7eb90c5dfc386 764 Gene3D G3DSA:3.30.365.10 352 438 1.1E-63 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS13630 bea1a2d38a9d4dad9eb7eb90c5dfc386 764 PANTHER PTHR11908 585 760 1.1E-206 T 23-04-2016 RR42_RS13630 bea1a2d38a9d4dad9eb7eb90c5dfc386 764 PANTHER PTHR11908 6 565 1.1E-206 T 23-04-2016 RR42_RS13630 bea1a2d38a9d4dad9eb7eb90c5dfc386 764 Gene3D G3DSA:3.90.1170.50 4 113 1.7E-40 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RR42_RS13630 bea1a2d38a9d4dad9eb7eb90c5dfc386 764 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 21 125 2.3E-31 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RR42_RS13630 bea1a2d38a9d4dad9eb7eb90c5dfc386 764 Gene3D G3DSA:3.30.365.10 439 579 2.7E-41 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS13630 bea1a2d38a9d4dad9eb7eb90c5dfc386 764 SUPERFAMILY SSF56003 117 758 4.58E-185 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS13630 bea1a2d38a9d4dad9eb7eb90c5dfc386 764 Gene3D G3DSA:3.30.365.10 168 273 6.2E-33 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS13630 bea1a2d38a9d4dad9eb7eb90c5dfc386 764 SUPERFAMILY SSF54665 4 147 3.79E-41 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RR42_RS12520 d01a2f7e23711cdc073cf8052c432910 175 Gene3D G3DSA:3.90.1170.40 2 148 6.9E-55 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 RR42_RS12520 d01a2f7e23711cdc073cf8052c432910 175 SUPERFAMILY SSF54690 3 148 1.23E-50 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 RR42_RS12520 d01a2f7e23711cdc073cf8052c432910 175 Pfam PF02391 MoaE protein 6 118 2.2E-36 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 RR42_RS12520 d01a2f7e23711cdc073cf8052c432910 175 PANTHER PTHR23404:SF2 22 164 3.7E-38 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 RR42_RS12520 d01a2f7e23711cdc073cf8052c432910 175 PANTHER PTHR23404 22 164 3.7E-38 T 23-04-2016 RR42_RS04660 7d0b1a1f7b79a1b912b40f9f065be5a6 255 SUPERFAMILY SSF53448 1 146 5.31E-29 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RR42_RS04660 7d0b1a1f7b79a1b912b40f9f065be5a6 255 PANTHER PTHR10859 1 126 2.5E-28 T 23-04-2016 RR42_RS04660 7d0b1a1f7b79a1b912b40f9f065be5a6 255 Gene3D G3DSA:3.90.550.10 1 107 1.7E-15 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RR42_RS04660 7d0b1a1f7b79a1b912b40f9f065be5a6 255 Pfam PF00535 Glycosyl transferase family 2 4 122 1.9E-17 T 23-04-2016 IPR001173 Glycosyltransferase 2-like RR42_RS04660 7d0b1a1f7b79a1b912b40f9f065be5a6 255 PANTHER PTHR10859:SF99 1 126 2.5E-28 T 23-04-2016 RR42_RS14430 e1b4d7eaf8f2acc4d073d45dfe8d2f67 433 Gene3D G3DSA:1.10.580.10 56 284 2.6E-97 T 23-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 RR42_RS14430 e1b4d7eaf8f2acc4d073d45dfe8d2f67 433 PRINTS PR00143 Citrate synthase signature 245 273 4.9E-54 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS14430 e1b4d7eaf8f2acc4d073d45dfe8d2f67 433 PRINTS PR00143 Citrate synthase signature 384 398 4.9E-54 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS14430 e1b4d7eaf8f2acc4d073d45dfe8d2f67 433 PRINTS PR00143 Citrate synthase signature 169 182 4.9E-54 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS14430 e1b4d7eaf8f2acc4d073d45dfe8d2f67 433 PRINTS PR00143 Citrate synthase signature 223 238 4.9E-54 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS14430 e1b4d7eaf8f2acc4d073d45dfe8d2f67 433 PRINTS PR00143 Citrate synthase signature 300 320 4.9E-54 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS14430 e1b4d7eaf8f2acc4d073d45dfe8d2f67 433 PRINTS PR00143 Citrate synthase signature 364 380 4.9E-54 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS14430 e1b4d7eaf8f2acc4d073d45dfe8d2f67 433 ProSitePatterns PS00480 Citrate synthase signature. 307 319 - T 23-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 RR42_RS14430 e1b4d7eaf8f2acc4d073d45dfe8d2f67 433 Gene3D G3DSA:1.10.230.10 285 378 1.1E-41 T 23-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain RR42_RS14430 e1b4d7eaf8f2acc4d073d45dfe8d2f67 433 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 18 427 8.0E-243 T 23-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 RR42_RS14430 e1b4d7eaf8f2acc4d073d45dfe8d2f67 433 PIRSF PIRSF001369 41 433 2.5E-161 T 23-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 RR42_RS14430 e1b4d7eaf8f2acc4d073d45dfe8d2f67 433 PANTHER PTHR11739 31 418 3.8E-194 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS14430 e1b4d7eaf8f2acc4d073d45dfe8d2f67 433 SUPERFAMILY SSF48256 9 433 1.83E-162 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS14430 e1b4d7eaf8f2acc4d073d45dfe8d2f67 433 Pfam PF00285 Citrate synthase, C-terminal domain 50 416 2.2E-130 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS17630 dcadaf98ffe79b07d7a8bc07c743f20a 272 SMART SM00934 17 255 1.3E-45 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RR42_RS17630 dcadaf98ffe79b07d7a8bc07c743f20a 272 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 17 249 1.9E-32 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RR42_RS17630 dcadaf98ffe79b07d7a8bc07c743f20a 272 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 2 268 36.368 T 23-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RR42_RS17630 dcadaf98ffe79b07d7a8bc07c743f20a 272 PANTHER PTHR19278:SF1 1 225 8.2E-65 T 23-04-2016 RR42_RS17630 dcadaf98ffe79b07d7a8bc07c743f20a 272 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 90 103 - T 23-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RR42_RS17630 dcadaf98ffe79b07d7a8bc07c743f20a 272 Gene3D G3DSA:3.20.20.70 5 262 1.2E-69 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS17630 dcadaf98ffe79b07d7a8bc07c743f20a 272 SUPERFAMILY SSF51366 3 262 6.67E-77 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RR42_RS17630 dcadaf98ffe79b07d7a8bc07c743f20a 272 PANTHER PTHR19278 1 225 8.2E-65 T 23-04-2016 RR42_RS17630 dcadaf98ffe79b07d7a8bc07c743f20a 272 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 3 255 3.9E-73 T 23-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RR42_RS01485 847939a1bbdd7637951fba62b2fca3b2 121 SUPERFAMILY SSF55785 23 108 2.79E-11 T 23-04-2016 IPR000014 PAS domain RR42_RS01485 847939a1bbdd7637951fba62b2fca3b2 121 Gene3D G3DSA:3.30.450.20 11 121 1.5E-31 T 23-04-2016 RR42_RS19245 1c1818c6d41f76b39e56ea5265160316 104 SUPERFAMILY SSF54189 8 97 1.51E-29 T 23-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19245 1c1818c6d41f76b39e56ea5265160316 104 Pfam PF00276 Ribosomal protein L23 13 99 1.4E-30 T 23-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 RR42_RS19245 1c1818c6d41f76b39e56ea5265160316 104 PANTHER PTHR11620 12 97 2.1E-23 T 23-04-2016 RR42_RS19245 1c1818c6d41f76b39e56ea5265160316 104 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 12 102 21.638 T 23-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 RR42_RS19245 1c1818c6d41f76b39e56ea5265160316 104 Gene3D G3DSA:3.30.70.330 10 101 5.6E-33 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 RR42_RS11785 bcc705c4071b0e2451feb332e74840c3 141 Gene3D G3DSA:2.40.50.140 87 140 1.6E-5 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS11785 bcc705c4071b0e2451feb332e74840c3 141 Pfam PF01957 NfeD-like C-terminal, partner-binding 6 140 6.8E-11 T 23-04-2016 IPR002810 NfeD-like, C-terminal domain RR42_RS01630 d30e84ae5dc4f31e5a21381727aa1d2f 307 PANTHER PTHR24220:SF519 58 304 1.0E-125 T 23-04-2016 RR42_RS01630 d30e84ae5dc4f31e5a21381727aa1d2f 307 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 282 304 1.7E-9 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RR42_RS01630 d30e84ae5dc4f31e5a21381727aa1d2f 307 Pfam PF00005 ABC transporter 72 233 3.3E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS01630 d30e84ae5dc4f31e5a21381727aa1d2f 307 SMART SM00382 81 282 1.5E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS01630 d30e84ae5dc4f31e5a21381727aa1d2f 307 Gene3D G3DSA:3.40.50.300 54 302 1.1E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01630 d30e84ae5dc4f31e5a21381727aa1d2f 307 PANTHER PTHR24220 58 304 1.0E-125 T 23-04-2016 RR42_RS01630 d30e84ae5dc4f31e5a21381727aa1d2f 307 SUPERFAMILY SSF52540 55 304 1.88E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS19460 ac3bb42ff9d9af79c54a6673c7e4cfff 232 Gene3D G3DSA:3.40.630.30 33 171 3.6E-18 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS19460 ac3bb42ff9d9af79c54a6673c7e4cfff 232 SUPERFAMILY SSF55729 35 171 5.49E-17 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS19460 ac3bb42ff9d9af79c54a6673c7e4cfff 232 Pfam PF00583 Acetyltransferase (GNAT) family 94 169 2.1E-8 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RR42_RS16110 814bbff2ad3e76e97ab7b045010c1eb6 191 SMART SM00855 2 151 7.2E-11 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RR42_RS16110 814bbff2ad3e76e97ab7b045010c1eb6 191 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 189 8.7E-34 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RR42_RS16110 814bbff2ad3e76e97ab7b045010c1eb6 191 PANTHER PTHR23029 46 189 3.4E-21 T 23-04-2016 RR42_RS16110 814bbff2ad3e76e97ab7b045010c1eb6 191 SUPERFAMILY SSF53254 1 190 6.21E-38 T 23-04-2016 IPR029033 Histidine phosphatase superfamily RR42_RS16110 814bbff2ad3e76e97ab7b045010c1eb6 191 Gene3D G3DSA:3.40.50.1240 1 190 8.8E-37 T 23-04-2016 IPR029033 Histidine phosphatase superfamily RR42_RS16755 8b0c9cb71d46d5f2ec71fc615069f5ae 517 Pfam PF02913 FAD linked oxidases, C-terminal domain 268 505 1.2E-31 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RR42_RS16755 8b0c9cb71d46d5f2ec71fc615069f5ae 517 SUPERFAMILY SSF56176 59 268 2.38E-47 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RR42_RS16755 8b0c9cb71d46d5f2ec71fc615069f5ae 517 Gene3D G3DSA:3.30.465.10 147 268 1.8E-26 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RR42_RS16755 8b0c9cb71d46d5f2ec71fc615069f5ae 517 Gene3D G3DSA:3.30.43.10 47 146 1.4E-17 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RR42_RS16755 8b0c9cb71d46d5f2ec71fc615069f5ae 517 PANTHER PTHR11748 46 505 4.7E-90 T 23-04-2016 RR42_RS16755 8b0c9cb71d46d5f2ec71fc615069f5ae 517 SUPERFAMILY SSF55103 245 510 7.06E-36 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RR42_RS16755 8b0c9cb71d46d5f2ec71fc615069f5ae 517 Pfam PF01565 FAD binding domain 93 231 9.2E-31 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RR42_RS16755 8b0c9cb71d46d5f2ec71fc615069f5ae 517 Gene3D G3DSA:1.10.45.10 467 507 7.6E-12 T 23-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RR42_RS16755 8b0c9cb71d46d5f2ec71fc615069f5ae 517 PANTHER PTHR11748:SF3 46 505 4.7E-90 T 23-04-2016 IPR025650 Alkyldihydroxyacetonephosphate synthase GO:0008609|GO:0008610 KEGG: 00565+2.5.1.26|UniPathway: UPA00781 RR42_RS07415 93f90cee84d497318c9c1e51d9a1bc74 470 Gene3D G3DSA:1.10.45.10 430 469 5.2E-13 T 23-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RR42_RS07415 93f90cee84d497318c9c1e51d9a1bc74 470 SUPERFAMILY SSF56176 6 217 2.94E-71 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RR42_RS07415 93f90cee84d497318c9c1e51d9a1bc74 470 Pfam PF01565 FAD binding domain 42 180 1.3E-35 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RR42_RS07415 93f90cee84d497318c9c1e51d9a1bc74 470 SUPERFAMILY SSF55103 222 470 1.26E-52 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RR42_RS07415 93f90cee84d497318c9c1e51d9a1bc74 470 Pfam PF02913 FAD linked oxidases, C-terminal domain 221 469 6.8E-50 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RR42_RS07415 93f90cee84d497318c9c1e51d9a1bc74 470 Gene3D G3DSA:3.30.465.10 99 218 6.6E-34 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RR42_RS07415 93f90cee84d497318c9c1e51d9a1bc74 470 PANTHER PTHR11748:SF76 1 470 1.4E-179 T 23-04-2016 RR42_RS07415 93f90cee84d497318c9c1e51d9a1bc74 470 Gene3D G3DSA:3.30.43.10 5 97 5.7E-24 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RR42_RS07415 93f90cee84d497318c9c1e51d9a1bc74 470 PANTHER PTHR11748 1 470 1.4E-179 T 23-04-2016 RR42_RS16070 2a1ddf8044bcc086f38158c15ac91b65 216 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 155 2.0E-18 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RR42_RS16070 2a1ddf8044bcc086f38158c15ac91b65 216 SUPERFAMILY SSF52540 3 194 3.66E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS16070 2a1ddf8044bcc086f38158c15ac91b65 216 Gene3D G3DSA:3.40.50.300 3 203 3.0E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS16070 2a1ddf8044bcc086f38158c15ac91b65 216 PIRSF PIRSF009320 1 201 4.0E-27 T 23-04-2016 RR42_RS16070 2a1ddf8044bcc086f38158c15ac91b65 216 PANTHER PTHR13696 1 213 2.7E-23 T 23-04-2016 RR42_RS10310 48cd9ac17572b1f7c6910adbfb472c78 297 PANTHER PTHR37418 2 88 2.5E-110 T 23-04-2016 RR42_RS10310 48cd9ac17572b1f7c6910adbfb472c78 297 PANTHER PTHR37418 106 296 2.5E-110 T 23-04-2016 RR42_RS10310 48cd9ac17572b1f7c6910adbfb472c78 297 Gene3D G3DSA:3.20.20.70 3 295 2.2E-98 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS10310 48cd9ac17572b1f7c6910adbfb472c78 297 PANTHER PTHR37418:SF2 2 88 2.5E-110 T 23-04-2016 RR42_RS10310 48cd9ac17572b1f7c6910adbfb472c78 297 PANTHER PTHR37418:SF2 106 296 2.5E-110 T 23-04-2016 RR42_RS10310 48cd9ac17572b1f7c6910adbfb472c78 297 Pfam PF05853 beta-keto acid cleavage enzyme 4 293 9.5E-89 T 23-04-2016 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00600+2.3.1.24|UniPathway: UPA00870 RR42_RS15485 5661ed22833d9d93286f5b8f4be23461 415 PANTHER PTHR11680 9 415 1.2E-250 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RR42_RS15485 5661ed22833d9d93286f5b8f4be23461 415 Gene3D G3DSA:3.90.1150.10 284 415 1.1E-57 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS15485 5661ed22833d9d93286f5b8f4be23461 415 SUPERFAMILY SSF53383 8 415 2.75E-180 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS15485 5661ed22833d9d93286f5b8f4be23461 415 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 8 415 52.683 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RR42_RS15485 5661ed22833d9d93286f5b8f4be23461 415 PIRSF PIRSF000412 1 415 3.2E-167 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RR42_RS15485 5661ed22833d9d93286f5b8f4be23461 415 Pfam PF00464 Serine hydroxymethyltransferase 10 383 2.4E-173 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RR42_RS15485 5661ed22833d9d93286f5b8f4be23461 415 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 23-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RR42_RS15485 5661ed22833d9d93286f5b8f4be23461 415 Gene3D G3DSA:3.40.640.10 38 283 1.2E-103 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS11460 1125aa0a51873fe5b8c2c85519cf1f2d 305 Gene3D G3DSA:3.60.15.10 4 305 1.7E-113 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS11460 1125aa0a51873fe5b8c2c85519cf1f2d 305 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 5 305 5.1E-120 T 23-04-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 UniPathway: UPA00539 RR42_RS11460 1125aa0a51873fe5b8c2c85519cf1f2d 305 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 305 168.281 T 23-04-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 UniPathway: UPA00539 RR42_RS11460 1125aa0a51873fe5b8c2c85519cf1f2d 305 Pfam PF12706 Beta-lactamase superfamily domain 52 272 2.6E-49 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS11460 1125aa0a51873fe5b8c2c85519cf1f2d 305 SUPERFAMILY SSF56281 4 305 6.27E-58 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS00360 30a2dd0fbaa615d4a10182e1518a799d 245 PANTHER PTHR28047 1 232 2.4E-53 T 23-04-2016 RR42_RS00360 30a2dd0fbaa615d4a10182e1518a799d 245 Pfam PF01177 Asp/Glu/Hydantoin racemase 4 209 1.3E-14 T 23-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS00360 30a2dd0fbaa615d4a10182e1518a799d 245 PANTHER PTHR28047:SF1 1 232 2.4E-53 T 23-04-2016 RR42_RS00505 ee8646e311d1518ab6bf7397ae48985d 678 SUPERFAMILY SSF55874 513 661 1.01E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS00505 ee8646e311d1518ab6bf7397ae48985d 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 660 3.0E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS00505 ee8646e311d1518ab6bf7397ae48985d 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 623 641 3.0E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS00505 ee8646e311d1518ab6bf7397ae48985d 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 608 618 3.0E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS00505 ee8646e311d1518ab6bf7397ae48985d 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 590 604 3.0E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS00505 ee8646e311d1518ab6bf7397ae48985d 678 PANTHER PTHR24423 414 660 7.6E-59 T 23-04-2016 RR42_RS00505 ee8646e311d1518ab6bf7397ae48985d 678 PANTHER PTHR24423 37 43 7.6E-59 T 23-04-2016 RR42_RS00505 ee8646e311d1518ab6bf7397ae48985d 678 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 554 661 2.2E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS00505 ee8646e311d1518ab6bf7397ae48985d 678 SMART SM00388 442 505 8.0E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS00505 ee8646e311d1518ab6bf7397ae48985d 678 Pfam PF00512 His Kinase A (phospho-acceptor) domain 443 501 1.5E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS00505 ee8646e311d1518ab6bf7397ae48985d 678 SMART SM00387 553 663 2.8E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS00505 ee8646e311d1518ab6bf7397ae48985d 678 SUPERFAMILY SSF47384 436 501 6.67E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS00505 ee8646e311d1518ab6bf7397ae48985d 678 Gene3D G3DSA:1.10.287.130 437 501 7.2E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS00505 ee8646e311d1518ab6bf7397ae48985d 678 Pfam PF07695 7TM diverse intracellular signalling 180 383 5.0E-23 T 23-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 RR42_RS00505 ee8646e311d1518ab6bf7397ae48985d 678 Pfam PF07696 7TMR-DISM extracellular 2 34 168 1.2E-30 T 23-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 RR42_RS00505 ee8646e311d1518ab6bf7397ae48985d 678 Gene3D G3DSA:3.30.565.10 515 664 2.8E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS16750 79ca7c42977749aac728f86654480a95 194 SUPERFAMILY SSF110391 13 186 7.85E-49 T 23-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 RR42_RS16750 79ca7c42977749aac728f86654480a95 194 Gene3D G3DSA:3.20.20.400 4 187 2.6E-47 T 23-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 RR42_RS16750 79ca7c42977749aac728f86654480a95 194 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 14 185 2.8E-48 T 23-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 RR42_RS16750 79ca7c42977749aac728f86654480a95 194 PANTHER PTHR35787 4 191 3.6E-36 T 23-04-2016 RR42_RS16750 79ca7c42977749aac728f86654480a95 194 PIRSF PIRSF016897 3 191 5.3E-56 T 23-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 RR42_RS01835 3bc4abbc5ff24a70a17719d81a8a0306 85 SUPERFAMILY SSF52833 1 84 1.31E-23 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS01835 3bc4abbc5ff24a70a17719d81a8a0306 85 PANTHER PTHR10168 3 83 1.7E-23 T 23-04-2016 RR42_RS01835 3bc4abbc5ff24a70a17719d81a8a0306 85 Gene3D G3DSA:3.40.30.10 1 79 6.0E-26 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS01835 3bc4abbc5ff24a70a17719d81a8a0306 85 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 23-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 RR42_RS01835 3bc4abbc5ff24a70a17719d81a8a0306 85 Pfam PF00462 Glutaredoxin 4 64 6.2E-19 T 23-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 RR42_RS01835 3bc4abbc5ff24a70a17719d81a8a0306 85 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 2.5E-32 T 23-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 RR42_RS01835 3bc4abbc5ff24a70a17719d81a8a0306 85 PRINTS PR00160 Glutaredoxin signature 47 60 2.0E-14 T 23-04-2016 IPR014025 Glutaredoxin subgroup RR42_RS01835 3bc4abbc5ff24a70a17719d81a8a0306 85 PRINTS PR00160 Glutaredoxin signature 61 74 2.0E-14 T 23-04-2016 IPR014025 Glutaredoxin subgroup RR42_RS01835 3bc4abbc5ff24a70a17719d81a8a0306 85 PRINTS PR00160 Glutaredoxin signature 4 22 2.0E-14 T 23-04-2016 IPR014025 Glutaredoxin subgroup RR42_RS02550 830c16d2e04dce69b39df6b838d49560 261 Gene3D G3DSA:1.10.3720.10 59 255 4.5E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS02550 830c16d2e04dce69b39df6b838d49560 261 PANTHER PTHR30151 13 258 2.8E-66 T 23-04-2016 RR42_RS02550 830c16d2e04dce69b39df6b838d49560 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 254 3.9E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS02550 830c16d2e04dce69b39df6b838d49560 261 SUPERFAMILY SSF161098 60 242 2.62E-26 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS14205 6dac6646795497bf7e77223b762ab2c1 392 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 164 388 1.1E-71 T 23-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 RR42_RS14205 6dac6646795497bf7e77223b762ab2c1 392 Gene3D G3DSA:3.20.140.10 1 372 8.8E-144 T 23-04-2016 RR42_RS14205 6dac6646795497bf7e77223b762ab2c1 392 SUPERFAMILY SSF51690 118 388 2.55E-89 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 RR42_RS14205 6dac6646795497bf7e77223b762ab2c1 392 PIRSF PIRSF000484 1 376 2.4E-66 T 23-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 RR42_RS14205 6dac6646795497bf7e77223b762ab2c1 392 PANTHER PTHR11098:SF16 2 388 2.5E-184 T 23-04-2016 RR42_RS14205 6dac6646795497bf7e77223b762ab2c1 392 SUPERFAMILY SSF54675 1 137 2.75E-44 T 23-04-2016 RR42_RS14205 6dac6646795497bf7e77223b762ab2c1 392 PANTHER PTHR11098 2 388 2.5E-184 T 23-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 RR42_RS14205 6dac6646795497bf7e77223b762ab2c1 392 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 1 390 46.321 T 23-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 RR42_RS14205 6dac6646795497bf7e77223b762ab2c1 392 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 2 387 2.0E-145 T 23-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 RR42_RS17675 372d14edbf71b37f6f7082d4003cf529 465 Gene3D G3DSA:3.90.190.20 320 459 9.5E-36 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RR42_RS17675 372d14edbf71b37f6f7082d4003cf529 465 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 460 58.968 T 23-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 RR42_RS17675 372d14edbf71b37f6f7082d4003cf529 465 Pfam PF08245 Mur ligase middle domain 108 298 7.9E-24 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS17675 372d14edbf71b37f6f7082d4003cf529 465 SUPERFAMILY SSF53244 318 458 2.62E-37 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RR42_RS17675 372d14edbf71b37f6f7082d4003cf529 465 Pfam PF02875 Mur ligase family, glutamate ligase domain 318 379 5.9E-11 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RR42_RS17675 372d14edbf71b37f6f7082d4003cf529 465 Pfam PF01225 Mur ligase family, catalytic domain 2 100 5.3E-20 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS17675 372d14edbf71b37f6f7082d4003cf529 465 PANTHER PTHR23135:SF17 1 457 6.1E-245 T 23-04-2016 RR42_RS17675 372d14edbf71b37f6f7082d4003cf529 465 PANTHER PTHR23135 1 457 6.1E-245 T 23-04-2016 RR42_RS17675 372d14edbf71b37f6f7082d4003cf529 465 Gene3D G3DSA:3.40.50.720 1 90 5.2E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS17675 372d14edbf71b37f6f7082d4003cf529 465 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 459 4.0E-214 T 23-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 RR42_RS17675 372d14edbf71b37f6f7082d4003cf529 465 SUPERFAMILY SSF51984 1 90 1.26E-21 T 23-04-2016 RR42_RS17675 372d14edbf71b37f6f7082d4003cf529 465 Gene3D G3DSA:3.40.1190.10 92 319 2.4E-88 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS17675 372d14edbf71b37f6f7082d4003cf529 465 SUPERFAMILY SSF53623 97 315 6.8E-51 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS03600 bda3803e086a954145a7c7eef94d5f37 323 PRINTS PR00412 Epoxide hydrolase signature 290 312 3.6E-6 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS03600 bda3803e086a954145a7c7eef94d5f37 323 PRINTS PR00412 Epoxide hydrolase signature 131 144 3.6E-6 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS03600 bda3803e086a954145a7c7eef94d5f37 323 PRINTS PR00412 Epoxide hydrolase signature 68 86 3.6E-6 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS03600 bda3803e086a954145a7c7eef94d5f37 323 PRINTS PR00412 Epoxide hydrolase signature 145 158 3.6E-6 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS03600 bda3803e086a954145a7c7eef94d5f37 323 Gene3D G3DSA:3.40.50.1820 36 314 1.2E-62 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS03600 bda3803e086a954145a7c7eef94d5f37 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 145 158 5.0E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS03600 bda3803e086a954145a7c7eef94d5f37 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 87 102 5.0E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS03600 bda3803e086a954145a7c7eef94d5f37 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 131 144 5.0E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS03600 bda3803e086a954145a7c7eef94d5f37 323 SUPERFAMILY SSF53474 39 314 3.65E-62 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS03600 bda3803e086a954145a7c7eef94d5f37 323 PANTHER PTHR10992 31 315 4.6E-51 T 23-04-2016 RR42_RS03600 bda3803e086a954145a7c7eef94d5f37 323 PANTHER PTHR10992:SF778 31 315 4.6E-51 T 23-04-2016 RR42_RS03600 bda3803e086a954145a7c7eef94d5f37 323 Pfam PF00561 alpha/beta hydrolase fold 63 251 3.2E-24 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS36535 6f79eafba67a53ca32eefeefd4441a9a 82 Pfam PF05567 Neisseria PilC beta-propeller domain 1 63 5.2E-8 T 23-04-2016 IPR008707 PilC beta-propeller domain RR42_RS17530 6cc51cec11b1b6f832430f5f1c090112 426 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 332 354 - T 23-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RR42_RS17530 6cc51cec11b1b6f832430f5f1c090112 426 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 17 415 2.5E-144 T 23-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RR42_RS17530 6cc51cec11b1b6f832430f5f1c090112 426 PIRSF PIRSF000151 2 426 1.0E-167 T 23-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RR42_RS17530 6cc51cec11b1b6f832430f5f1c090112 426 PANTHER PTHR11063 3 425 5.3E-166 T 23-04-2016 RR42_RS17530 6cc51cec11b1b6f832430f5f1c090112 426 Gene3D G3DSA:3.40.309.10 230 383 9.0E-41 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RR42_RS17530 6cc51cec11b1b6f832430f5f1c090112 426 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 9 425 40.604 T 23-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RR42_RS17530 6cc51cec11b1b6f832430f5f1c090112 426 Gene3D G3DSA:3.40.605.10 384 425 1.4E-95 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RR42_RS17530 6cc51cec11b1b6f832430f5f1c090112 426 Gene3D G3DSA:3.40.605.10 5 228 1.4E-95 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RR42_RS17530 6cc51cec11b1b6f832430f5f1c090112 426 PANTHER PTHR11063:SF8 3 425 5.3E-166 T 23-04-2016 RR42_RS17530 6cc51cec11b1b6f832430f5f1c090112 426 SUPERFAMILY SSF53720 8 425 6.81E-114 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RR42_RS17530 6cc51cec11b1b6f832430f5f1c090112 426 Pfam PF00171 Aldehyde dehydrogenase family 10 276 2.8E-15 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RR42_RS17530 6cc51cec11b1b6f832430f5f1c090112 426 Pfam PF00171 Aldehyde dehydrogenase family 315 382 1.0E-7 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RR42_RS04555 ca0e620d681195ae669458765c8c53ca 344 SUPERFAMILY SSF52540 1 239 2.06E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04555 ca0e620d681195ae669458765c8c53ca 344 SMART SM00930 265 340 2.7E-30 T 23-04-2016 IPR018449 NIL domain RR42_RS04555 ca0e620d681195ae669458765c8c53ca 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS04555 ca0e620d681195ae669458765c8c53ca 344 Pfam PF00005 ABC transporter 21 169 3.1E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS04555 ca0e620d681195ae669458765c8c53ca 344 PANTHER PTHR24220 3 341 3.3E-144 T 23-04-2016 RR42_RS04555 ca0e620d681195ae669458765c8c53ca 344 Gene3D G3DSA:3.30.70.260 237 343 1.4E-31 T 23-04-2016 RR42_RS04555 ca0e620d681195ae669458765c8c53ca 344 SMART SM00382 30 227 5.5E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS04555 ca0e620d681195ae669458765c8c53ca 344 PANTHER PTHR24220:SF455 3 341 3.3E-144 T 23-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 RR42_RS04555 ca0e620d681195ae669458765c8c53ca 344 Pfam PF09383 NIL domain 268 339 9.2E-23 T 23-04-2016 IPR018449 NIL domain RR42_RS04555 ca0e620d681195ae669458765c8c53ca 344 SUPERFAMILY SSF55021 248 343 9.84E-25 T 23-04-2016 RR42_RS04555 ca0e620d681195ae669458765c8c53ca 344 Gene3D G3DSA:3.40.50.300 1 236 6.2E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05260 1443a1ce16b510cd9896c4848751b148 468 PANTHER PTHR11119:SF3 14 161 2.8E-123 T 23-04-2016 RR42_RS05260 1443a1ce16b510cd9896c4848751b148 468 PANTHER PTHR11119:SF3 187 455 2.8E-123 T 23-04-2016 RR42_RS05260 1443a1ce16b510cd9896c4848751b148 468 Pfam PF00860 Permease family 22 414 6.0E-104 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RR42_RS05260 1443a1ce16b510cd9896c4848751b148 468 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 362 382 - T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 RR42_RS05260 1443a1ce16b510cd9896c4848751b148 468 TIGRFAM TIGR03173 pbuX: xanthine permease 25 448 3.6E-166 T 23-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 RR42_RS05260 1443a1ce16b510cd9896c4848751b148 468 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 17 445 1.6E-124 T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 RR42_RS05260 1443a1ce16b510cd9896c4848751b148 468 PANTHER PTHR11119 14 161 2.8E-123 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RR42_RS05260 1443a1ce16b510cd9896c4848751b148 468 PANTHER PTHR11119 187 455 2.8E-123 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RR42_RS20345 49943896064811efc657dd452eb7b103 724 Gene3D G3DSA:3.40.710.10 270 613 2.2E-74 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS20345 49943896064811efc657dd452eb7b103 724 PANTHER PTHR32282 28 690 2.5E-122 T 23-04-2016 RR42_RS20345 49943896064811efc657dd452eb7b103 724 Pfam PF00912 Transglycosylase 50 205 1.4E-44 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 RR42_RS20345 49943896064811efc657dd452eb7b103 724 SUPERFAMILY SSF53955 31 208 5.91E-44 T 23-04-2016 IPR023346 Lysozyme-like domain RR42_RS20345 49943896064811efc657dd452eb7b103 724 Pfam PF00905 Penicillin binding protein transpeptidase domain 302 570 1.4E-9 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RR42_RS20345 49943896064811efc657dd452eb7b103 724 Gene3D G3DSA:1.10.3810.10 48 207 6.2E-43 T 23-04-2016 RR42_RS20345 49943896064811efc657dd452eb7b103 724 SUPERFAMILY SSF56601 255 599 7.09E-83 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS20345 49943896064811efc657dd452eb7b103 724 PANTHER PTHR32282:SF0 28 690 2.5E-122 T 23-04-2016 RR42_RS20345 49943896064811efc657dd452eb7b103 724 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 24 593 3.7E-183 T 23-04-2016 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 RR42_RS20345 49943896064811efc657dd452eb7b103 724 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 631 710 2.1E-22 T 23-04-2016 IPR009647 Penicillin-binding, C-terminal KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 RR42_RS11700 aa24b736748745f0983629c5463c0605 217 PANTHER PTHR34606:SF2 3 215 1.5E-39 T 23-04-2016 RR42_RS11700 aa24b736748745f0983629c5463c0605 217 SMART SM00749 154 216 3.6E-4 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria RR42_RS11700 aa24b736748745f0983629c5463c0605 217 SMART SM00749 83 146 4.1E-4 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria RR42_RS11700 aa24b736748745f0983629c5463c0605 217 SMART SM00749 8 71 1.1E-7 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria RR42_RS11700 aa24b736748745f0983629c5463c0605 217 Pfam PF04972 BON domain 152 215 8.5E-14 T 23-04-2016 IPR007055 BON domain RR42_RS11700 aa24b736748745f0983629c5463c0605 217 Pfam PF04972 BON domain 79 146 6.5E-17 T 23-04-2016 IPR007055 BON domain RR42_RS11700 aa24b736748745f0983629c5463c0605 217 Pfam PF04972 BON domain 3 70 5.0E-16 T 23-04-2016 IPR007055 BON domain RR42_RS11700 aa24b736748745f0983629c5463c0605 217 PANTHER PTHR34606 3 215 1.5E-39 T 23-04-2016 RR42_RS15340 92d3f027d2938d240223981be0186678 91 Gene3D G3DSA:3.50.30.50 21 65 8.7E-5 T 23-04-2016 RR42_RS05285 48d38b159bf432266682cf743bc32b14 582 Gene3D G3DSA:2.140.10.10 66 580 7.8E-137 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RR42_RS05285 48d38b159bf432266682cf743bc32b14 582 Pfam PF13360 PQQ-like domain 102 241 9.7E-17 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat RR42_RS05285 48d38b159bf432266682cf743bc32b14 582 Pfam PF13360 PQQ-like domain 480 575 1.1E-9 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat RR42_RS05285 48d38b159bf432266682cf743bc32b14 582 SMART SM00564 471 497 83.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RR42_RS05285 48d38b159bf432266682cf743bc32b14 582 SMART SM00564 318 345 300.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RR42_RS05285 48d38b159bf432266682cf743bc32b14 582 SMART SM00564 113 144 0.0038 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RR42_RS05285 48d38b159bf432266682cf743bc32b14 582 SMART SM00564 506 538 0.001 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RR42_RS05285 48d38b159bf432266682cf743bc32b14 582 SMART SM00564 162 193 2.9E-6 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RR42_RS05285 48d38b159bf432266682cf743bc32b14 582 SMART SM00564 207 244 5.3E-4 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RR42_RS05285 48d38b159bf432266682cf743bc32b14 582 PANTHER PTHR32303 53 246 7.0E-84 T 23-04-2016 RR42_RS05285 48d38b159bf432266682cf743bc32b14 582 PANTHER PTHR32303 272 395 7.0E-84 T 23-04-2016 RR42_RS05285 48d38b159bf432266682cf743bc32b14 582 PANTHER PTHR32303 413 576 7.0E-84 T 23-04-2016 RR42_RS05285 48d38b159bf432266682cf743bc32b14 582 SUPERFAMILY SSF50998 64 581 7.59E-151 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RR42_RS05285 48d38b159bf432266682cf743bc32b14 582 PANTHER PTHR32303:SF2 53 246 7.0E-84 T 23-04-2016 RR42_RS05285 48d38b159bf432266682cf743bc32b14 582 PANTHER PTHR32303:SF2 272 395 7.0E-84 T 23-04-2016 RR42_RS05285 48d38b159bf432266682cf743bc32b14 582 PANTHER PTHR32303:SF2 413 576 7.0E-84 T 23-04-2016 RR42_RS15905 6b322e1db9dbf357885c63813669cd17 1007 SUPERFAMILY SSF51621 77 1007 2.04E-296 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS15905 6b322e1db9dbf357885c63813669cd17 1007 Gene3D G3DSA:1.20.1440.90 356 480 3.0E-23 T 23-04-2016 RR42_RS15905 6b322e1db9dbf357885c63813669cd17 1007 PANTHER PTHR30523:SF0 48 1007 0.0 T 23-04-2016 RR42_RS15905 6b322e1db9dbf357885c63813669cd17 1007 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 69 1007 19.208 T 23-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RR42_RS15905 6b322e1db9dbf357885c63813669cd17 1007 Pfam PF00311 Phosphoenolpyruvate carboxylase 203 1007 6.3E-294 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RR42_RS15905 6b322e1db9dbf357885c63813669cd17 1007 PANTHER PTHR30523 48 1007 0.0 T 23-04-2016 RR42_RS15905 6b322e1db9dbf357885c63813669cd17 1007 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 648 660 - T 23-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RR42_RS15905 6b322e1db9dbf357885c63813669cd17 1007 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 477 497 6.8E-53 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RR42_RS15905 6b322e1db9dbf357885c63813669cd17 1007 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 827 853 6.8E-53 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RR42_RS15905 6b322e1db9dbf357885c63813669cd17 1007 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 646 666 6.8E-53 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RR42_RS15905 6b322e1db9dbf357885c63813669cd17 1007 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 206 219 6.8E-53 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RR42_RS15905 6b322e1db9dbf357885c63813669cd17 1007 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 326 341 6.8E-53 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RR42_RS15905 6b322e1db9dbf357885c63813669cd17 1007 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 688 717 6.8E-53 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RR42_RS15905 6b322e1db9dbf357885c63813669cd17 1007 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 207 218 - T 23-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RR42_RS16260 313e952d5e61698cdbd5067894d41568 262 PIRSF PIRSF000857 24 262 1.8E-78 T 23-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 RR42_RS16260 313e952d5e61698cdbd5067894d41568 262 Gene3D G3DSA:3.40.50.620 31 227 9.4E-47 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS16260 313e952d5e61698cdbd5067894d41568 262 PANTHER PTHR23293:SF11 61 261 1.1E-70 T 23-04-2016 RR42_RS16260 313e952d5e61698cdbd5067894d41568 262 PANTHER PTHR23293 61 261 1.1E-70 T 23-04-2016 RR42_RS16260 313e952d5e61698cdbd5067894d41568 262 SUPERFAMILY SSF52402 31 219 1.9E-41 T 23-04-2016 RR42_RS16260 313e952d5e61698cdbd5067894d41568 262 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 58 255 1.0E-79 T 23-04-2016 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 RR42_RS16260 313e952d5e61698cdbd5067894d41568 262 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 64 231 4.2E-37 T 23-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 RR42_RS09105 c8bb8247fe9fb54811749d72c781892a 1216 Pfam PF02538 Hydantoinase B/oxoprolinase 709 1215 1.5E-203 T 23-04-2016 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 RR42_RS09105 c8bb8247fe9fb54811749d72c781892a 1216 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 20 198 2.8E-61 T 23-04-2016 IPR008040 Hydantoinaseoxoprolinase, N-terminal RR42_RS09105 c8bb8247fe9fb54811749d72c781892a 1216 PANTHER PTHR11365:SF2 12 1215 0.0 T 23-04-2016 RR42_RS09105 c8bb8247fe9fb54811749d72c781892a 1216 Pfam PF01968 Hydantoinase/oxoprolinase 218 508 5.8E-108 T 23-04-2016 IPR002821 Hydantoinase/oxoprolinase GO:0016787 RR42_RS09105 c8bb8247fe9fb54811749d72c781892a 1216 PANTHER PTHR11365 12 1215 0.0 T 23-04-2016 RR42_RS16520 bf04d4ba028beb8b0abf6525403f9393 179 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 169 4.7E-29 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS16520 bf04d4ba028beb8b0abf6525403f9393 179 Gene3D G3DSA:1.10.1740.10 8 106 4.0E-19 T 23-04-2016 RR42_RS16520 bf04d4ba028beb8b0abf6525403f9393 179 Gene3D G3DSA:1.10.10.10 110 173 4.7E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS16520 bf04d4ba028beb8b0abf6525403f9393 179 PANTHER PTHR30173:SF6 2 172 1.3E-36 T 23-04-2016 RR42_RS16520 bf04d4ba028beb8b0abf6525403f9393 179 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 35 65 - T 23-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS16520 bf04d4ba028beb8b0abf6525403f9393 179 Pfam PF04542 Sigma-70 region 2 16 78 1.3E-10 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS16520 bf04d4ba028beb8b0abf6525403f9393 179 PANTHER PTHR30173 2 172 1.3E-36 T 23-04-2016 RR42_RS16520 bf04d4ba028beb8b0abf6525403f9393 179 SUPERFAMILY SSF88659 110 172 7.41E-16 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS16520 bf04d4ba028beb8b0abf6525403f9393 179 SUPERFAMILY SSF88946 8 91 2.33E-16 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS16520 bf04d4ba028beb8b0abf6525403f9393 179 Pfam PF08281 Sigma-70, region 4 117 168 1.2E-15 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS07905 d2eb8e49e6f332ebe8f273e01071dfc0 278 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 152 177 - T 23-04-2016 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 RR42_RS07905 d2eb8e49e6f332ebe8f273e01071dfc0 278 Gene3D G3DSA:1.10.600.10 5 277 4.1E-93 T 23-04-2016 IPR008949 Isoprenoid synthase domain RR42_RS07905 d2eb8e49e6f332ebe8f273e01071dfc0 278 TIGRFAM TIGR03465 HpnD: squalene synthase HpnD 10 276 7.2E-116 T 23-04-2016 IPR017828 Squalene/phytoene synthase HpnD GO:0016117|GO:0016767 RR42_RS07905 d2eb8e49e6f332ebe8f273e01071dfc0 278 Pfam PF00494 Squalene/phytoene synthase 13 264 2.9E-77 T 23-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 RR42_RS07905 d2eb8e49e6f332ebe8f273e01071dfc0 278 PANTHER PTHR31480 5 278 7.8E-74 T 23-04-2016 RR42_RS07905 d2eb8e49e6f332ebe8f273e01071dfc0 278 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 122 137 - T 23-04-2016 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 RR42_RS07905 d2eb8e49e6f332ebe8f273e01071dfc0 278 SUPERFAMILY SSF48576 4 276 1.3E-85 T 23-04-2016 IPR008949 Isoprenoid synthase domain RR42_RS17150 aa8341a9fbf6adcd781f7f2a8e88726f 149 PANTHER PTHR37953:SF1 33 149 4.1E-28 T 23-04-2016 RR42_RS17150 aa8341a9fbf6adcd781f7f2a8e88726f 149 PANTHER PTHR37953 33 149 4.1E-28 T 23-04-2016 RR42_RS17150 aa8341a9fbf6adcd781f7f2a8e88726f 149 Pfam PF02643 Uncharacterized ACR, COG1430 41 142 3.3E-33 T 23-04-2016 IPR003795 Protein of unknown function DUF192 RR42_RS16285 d5a09ac1755f9becebf82cd0f70944e0 383 PANTHER PTHR18895 210 335 7.1E-19 T 23-04-2016 RR42_RS16285 d5a09ac1755f9becebf82cd0f70944e0 383 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 272 278 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RR42_RS16285 d5a09ac1755f9becebf82cd0f70944e0 383 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 208 275 5.3E-11 T 23-04-2016 RR42_RS16285 d5a09ac1755f9becebf82cd0f70944e0 383 Gene3D G3DSA:3.40.50.150 178 354 1.0E-27 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS16285 d5a09ac1755f9becebf82cd0f70944e0 383 SUPERFAMILY SSF53335 166 321 5.23E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS17670 6996cded38a12517372fc163a1e6db51 221 SUPERFAMILY SSF53474 2 189 2.05E-19 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS17670 6996cded38a12517372fc163a1e6db51 221 PANTHER PTHR35602 1 194 1.1E-58 T 23-04-2016 RR42_RS17670 6996cded38a12517372fc163a1e6db51 221 PANTHER PTHR35602:SF3 1 194 1.1E-58 T 23-04-2016 RR42_RS17670 6996cded38a12517372fc163a1e6db51 221 Gene3D G3DSA:3.40.50.1820 130 186 4.6E-18 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS17670 6996cded38a12517372fc163a1e6db51 221 Gene3D G3DSA:3.40.50.1820 2 98 4.6E-18 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS17670 6996cded38a12517372fc163a1e6db51 221 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 189 1.3E-58 T 23-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA RR42_RS01750 829fa172ab743eb7801de06da37749e6 269 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 40 269 1.0E-78 T 23-04-2016 IPR010239 Conserved hypothetical protein CHP02001 RR42_RS01750 829fa172ab743eb7801de06da37749e6 269 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 31 269 1.5E-64 T 23-04-2016 IPR010239 Conserved hypothetical protein CHP02001 RR42_RS04085 05828df1540be86a0f4a50ad206eba84 262 PANTHER PTHR37844 1 256 5.0E-30 T 23-04-2016 RR42_RS04085 05828df1540be86a0f4a50ad206eba84 262 Pfam PF00149 Calcineurin-like phosphoesterase 1 223 2.7E-10 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RR42_RS04085 05828df1540be86a0f4a50ad206eba84 262 Gene3D G3DSA:3.60.21.10 152 248 6.6E-18 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS04085 05828df1540be86a0f4a50ad206eba84 262 Gene3D G3DSA:3.60.21.10 1 64 6.6E-18 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS04085 05828df1540be86a0f4a50ad206eba84 262 SUPERFAMILY SSF56300 151 239 2.43E-26 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS04085 05828df1540be86a0f4a50ad206eba84 262 SUPERFAMILY SSF56300 1 111 2.43E-26 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS09365 51562923b1e4877be6a536916bcca1ce 446 SUPERFAMILY SSF103473 19 429 1.22E-63 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS09365 51562923b1e4877be6a536916bcca1ce 446 Gene3D G3DSA:1.20.1250.20 239 431 9.3E-20 T 23-04-2016 RR42_RS09365 51562923b1e4877be6a536916bcca1ce 446 Gene3D G3DSA:1.20.1250.20 25 207 3.7E-32 T 23-04-2016 RR42_RS09365 51562923b1e4877be6a536916bcca1ce 446 PANTHER PTHR23505 1 443 7.9E-43 T 23-04-2016 RR42_RS09365 51562923b1e4877be6a536916bcca1ce 446 Pfam PF07690 Major Facilitator Superfamily 34 387 1.5E-39 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS03595 ea67aaa5dd3302a9dc05452a7c29db72 305 PANTHER PTHR30126:SF4 2 290 2.0E-76 T 23-04-2016 RR42_RS03595 ea67aaa5dd3302a9dc05452a7c29db72 305 Gene3D G3DSA:3.40.190.10 181 256 3.6E-9 T 23-04-2016 RR42_RS03595 ea67aaa5dd3302a9dc05452a7c29db72 305 SUPERFAMILY SSF46785 2 111 4.81E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS03595 ea67aaa5dd3302a9dc05452a7c29db72 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 1.7E-14 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS03595 ea67aaa5dd3302a9dc05452a7c29db72 305 Gene3D G3DSA:1.10.10.10 5 88 1.4E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS03595 ea67aaa5dd3302a9dc05452a7c29db72 305 Pfam PF03466 LysR substrate binding domain 89 290 6.6E-25 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS03595 ea67aaa5dd3302a9dc05452a7c29db72 305 SUPERFAMILY SSF53850 89 290 7.24E-27 T 23-04-2016 RR42_RS03595 ea67aaa5dd3302a9dc05452a7c29db72 305 PANTHER PTHR30126 2 290 2.0E-76 T 23-04-2016 RR42_RS03595 ea67aaa5dd3302a9dc05452a7c29db72 305 Gene3D G3DSA:3.40.190.10 89 180 1.2E-13 T 23-04-2016 RR42_RS13105 1db20e7b3b629f706de1649c5c84e95a 468 SUPERFAMILY SSF117892 199 322 1.09E-20 T 23-04-2016 IPR001107 Band 7 domain RR42_RS13105 1db20e7b3b629f706de1649c5c84e95a 468 Pfam PF12221 Bacterial membrane protein N terminal 40 99 1.4E-11 T 23-04-2016 IPR020980 Menbrane protein HflK, N-terminal RR42_RS13105 1db20e7b3b629f706de1649c5c84e95a 468 PANTHER PTHR10264 52 431 8.0E-111 T 23-04-2016 IPR001972 Stomatin family GO:0016020 RR42_RS13105 1db20e7b3b629f706de1649c5c84e95a 468 SMART SM00244 138 315 2.2E-23 T 23-04-2016 IPR001107 Band 7 domain RR42_RS13105 1db20e7b3b629f706de1649c5c84e95a 468 PANTHER PTHR10264:SF51 52 431 8.0E-111 T 23-04-2016 IPR010201 HflK GO:0016021 RR42_RS13105 1db20e7b3b629f706de1649c5c84e95a 468 TIGRFAM TIGR01933 hflK: HflK protein 140 417 6.0E-88 T 23-04-2016 IPR010201 HflK GO:0016021 RR42_RS13105 1db20e7b3b629f706de1649c5c84e95a 468 Pfam PF01145 SPFH domain / Band 7 family 142 331 6.4E-30 T 23-04-2016 IPR001107 Band 7 domain RR42_RS20235 798a10e431ae77bd2a99a8e2f000a0ca 247 Gene3D G3DSA:3.40.50.300 4 241 2.2E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20235 798a10e431ae77bd2a99a8e2f000a0ca 247 SUPERFAMILY SSF52540 4 241 2.33E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20235 798a10e431ae77bd2a99a8e2f000a0ca 247 SMART SM00382 29 242 9.2E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS20235 798a10e431ae77bd2a99a8e2f000a0ca 247 PANTHER PTHR24220:SF568 6 245 1.4E-109 T 23-04-2016 RR42_RS20235 798a10e431ae77bd2a99a8e2f000a0ca 247 Pfam PF00005 ABC transporter 21 170 8.9E-25 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS20235 798a10e431ae77bd2a99a8e2f000a0ca 247 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS20235 798a10e431ae77bd2a99a8e2f000a0ca 247 PANTHER PTHR24220 6 245 1.4E-109 T 23-04-2016 RR42_RS10905 b9253f31fd901092a89850e3072fc16f 204 Gene3D G3DSA:3.40.50.300 2 202 1.5E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS10905 b9253f31fd901092a89850e3072fc16f 204 PANTHER PTHR10344 1 202 1.5E-61 T 23-04-2016 RR42_RS10905 b9253f31fd901092a89850e3072fc16f 204 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 194 1.5E-50 T 23-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 RR42_RS10905 b9253f31fd901092a89850e3072fc16f 204 Pfam PF02223 Thymidylate kinase 8 194 1.0E-47 T 23-04-2016 RR42_RS10905 b9253f31fd901092a89850e3072fc16f 204 SUPERFAMILY SSF52540 1 201 2.42E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS10905 b9253f31fd901092a89850e3072fc16f 204 Hamap MF_00165 Thymidylate kinase [tmk]. 4 204 28.717 T 23-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 RR42_RS13075 bad359a64f0c71d3f1dd2041e475cc43 144 Gene3D G3DSA:1.10.10.10 1 139 1.4E-43 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS13075 bad359a64f0c71d3f1dd2041e475cc43 144 PANTHER PTHR33221 2 144 1.1E-39 T 23-04-2016 RR42_RS13075 bad359a64f0c71d3f1dd2041e475cc43 144 PANTHER PTHR33221:SF5 2 144 1.1E-39 T 23-04-2016 RR42_RS13075 bad359a64f0c71d3f1dd2041e475cc43 144 Pfam PF02082 Transcriptional regulator 1 81 2.7E-22 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type RR42_RS13075 bad359a64f0c71d3f1dd2041e475cc43 144 SUPERFAMILY SSF46785 6 131 5.18E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS17325 d1537a17c7e6d6ccbabbbc330317c373 240 PANTHER PTHR30249:SF5 1 238 1.7E-93 T 23-04-2016 RR42_RS17325 d1537a17c7e6d6ccbabbbc330317c373 240 Pfam PF04172 LrgB-like family 23 236 9.8E-80 T 23-04-2016 IPR007300 CidB/LrgB family RR42_RS17325 d1537a17c7e6d6ccbabbbc330317c373 240 PANTHER PTHR30249 1 238 1.7E-93 T 23-04-2016 RR42_RS01830 5676b034912aa7550c91b5759138e33a 137 SUPERFAMILY SSF52821 32 137 1.03E-33 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS01830 5676b034912aa7550c91b5759138e33a 137 PANTHER PTHR12231:SF138 43 137 2.8E-21 T 23-04-2016 RR42_RS01830 5676b034912aa7550c91b5759138e33a 137 Pfam PF00581 Rhodanese-like domain 41 130 1.7E-18 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS01830 5676b034912aa7550c91b5759138e33a 137 PANTHER PTHR12231 43 137 2.8E-21 T 23-04-2016 RR42_RS01830 5676b034912aa7550c91b5759138e33a 137 SMART SM00450 37 134 1.3E-24 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS01830 5676b034912aa7550c91b5759138e33a 137 Gene3D G3DSA:3.40.250.10 24 137 1.4E-32 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS00865 2dce2b6779d4fbd64c5aab4216773aef 152 PANTHER PTHR12418:SF28 22 147 1.2E-23 T 23-04-2016 RR42_RS00865 2dce2b6779d4fbd64c5aab4216773aef 152 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 27 129 1.1E-18 T 23-04-2016 IPR003736 Phenylacetic acid degradation-related domain RR42_RS00865 2dce2b6779d4fbd64c5aab4216773aef 152 Gene3D G3DSA:3.10.129.10 15 147 2.8E-33 T 23-04-2016 IPR029069 HotDog domain RR42_RS00865 2dce2b6779d4fbd64c5aab4216773aef 152 PANTHER PTHR12418 22 147 1.2E-23 T 23-04-2016 RR42_RS00865 2dce2b6779d4fbd64c5aab4216773aef 152 SUPERFAMILY SSF54637 15 146 2.01E-27 T 23-04-2016 IPR029069 HotDog domain RR42_RS00865 2dce2b6779d4fbd64c5aab4216773aef 152 Pfam PF03061 Thioesterase superfamily 57 130 3.7E-13 T 23-04-2016 IPR006683 Thioesterase domain RR42_RS12065 4eb15878eea8cd186b615b0ee7ac3709 89 PRINTS PR00689 Acyl-coA-binding protein signature 5 20 1.3E-17 T 23-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 RR42_RS12065 4eb15878eea8cd186b615b0ee7ac3709 89 PRINTS PR00689 Acyl-coA-binding protein signature 22 40 1.3E-17 T 23-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 RR42_RS12065 4eb15878eea8cd186b615b0ee7ac3709 89 PRINTS PR00689 Acyl-coA-binding protein signature 45 60 1.3E-17 T 23-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 RR42_RS12065 4eb15878eea8cd186b615b0ee7ac3709 89 PRINTS PR00689 Acyl-coA-binding protein signature 66 83 1.3E-17 T 23-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 RR42_RS12065 4eb15878eea8cd186b615b0ee7ac3709 89 SUPERFAMILY SSF47027 3 84 1.83E-24 T 23-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 RR42_RS12065 4eb15878eea8cd186b615b0ee7ac3709 89 Gene3D G3DSA:1.20.80.10 1 83 4.2E-27 T 23-04-2016 IPR014352 FERM/acyl-CoA-binding protein, 3-helical bundle RR42_RS12065 4eb15878eea8cd186b615b0ee7ac3709 89 Pfam PF00887 Acyl CoA binding protein 6 83 3.4E-23 T 23-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 RR42_RS12065 4eb15878eea8cd186b615b0ee7ac3709 89 PANTHER PTHR23310 1 83 5.0E-30 T 23-04-2016 RR42_RS12175 ee922a39314ae11b5a6304b72313374c 528 SUPERFAMILY SSF51645 5 528 1.26E-183 T 23-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 RR42_RS12175 ee922a39314ae11b5a6304b72313374c 528 ProSitePatterns PS00510 Malate synthase signature. 263 278 - T 23-04-2016 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 RR42_RS12175 ee922a39314ae11b5a6304b72313374c 528 Gene3D G3DSA:1.20.1220.12 411 522 3.6E-30 T 23-04-2016 RR42_RS12175 ee922a39314ae11b5a6304b72313374c 528 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 22 528 3.5E-222 T 23-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 RR42_RS12175 ee922a39314ae11b5a6304b72313374c 528 PIRSF PIRSF001363 1 528 6.2E-244 T 23-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 RR42_RS12175 ee922a39314ae11b5a6304b72313374c 528 PANTHER PTHR21631:SF1 1 528 1.9E-262 T 23-04-2016 RR42_RS12175 ee922a39314ae11b5a6304b72313374c 528 Gene3D G3DSA:3.20.20.360 71 407 5.8E-112 T 23-04-2016 RR42_RS12175 ee922a39314ae11b5a6304b72313374c 528 PANTHER PTHR21631 1 528 1.9E-262 T 23-04-2016 RR42_RS12175 ee922a39314ae11b5a6304b72313374c 528 Pfam PF01274 Malate synthase 10 528 4.7E-195 T 23-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 RR42_RS01925 c4e768ec995ee88c3eddb53602bd6828 208 Gene3D G3DSA:3.40.30.10 21 207 2.1E-60 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS01925 c4e768ec995ee88c3eddb53602bd6828 208 Pfam PF02630 SCO1/SenC 29 186 2.3E-37 T 23-04-2016 IPR003782 Copper chaperone SCO1/SenC RR42_RS01925 c4e768ec995ee88c3eddb53602bd6828 208 PANTHER PTHR12151 35 207 1.4E-53 T 23-04-2016 IPR003782 Copper chaperone SCO1/SenC RR42_RS01925 c4e768ec995ee88c3eddb53602bd6828 208 SUPERFAMILY SSF52833 49 207 3.16E-51 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS04340 bc302cc5c71432090b94737e1345a913 226 SUPERFAMILY SSF48371 33 118 8.64E-7 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 RR42_RS04340 bc302cc5c71432090b94737e1345a913 226 Gene3D G3DSA:1.25.10.10 23 118 2.3E-6 T 23-04-2016 IPR011989 Armadillo-like helical RR42_RS00330 49298ef3418dacef6670225fc21d54f8 212 SUPERFAMILY SSF52833 58 208 3.17E-50 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS00330 49298ef3418dacef6670225fc21d54f8 212 Gene3D G3DSA:3.40.30.10 58 209 3.1E-53 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS00330 49298ef3418dacef6670225fc21d54f8 212 PANTHER PTHR11592 66 209 2.8E-61 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RR42_RS00330 49298ef3418dacef6670225fc21d54f8 212 PRINTS PR01011 Glutathione peroxidase family signature 170 179 3.1E-12 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RR42_RS00330 49298ef3418dacef6670225fc21d54f8 212 PRINTS PR01011 Glutathione peroxidase family signature 75 92 3.1E-12 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RR42_RS00330 49298ef3418dacef6670225fc21d54f8 212 PRINTS PR01011 Glutathione peroxidase family signature 110 126 3.1E-12 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RR42_RS00330 49298ef3418dacef6670225fc21d54f8 212 ProSitePatterns PS00460 Glutathione peroxidases active site. 77 92 - T 23-04-2016 IPR029759 Glutathione peroxidase active site RR42_RS00330 49298ef3418dacef6670225fc21d54f8 212 Pfam PF00255 Glutathione peroxidase 66 162 4.7E-30 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RR42_RS05225 52c1f0afedcaf7f150c915ba80538be8 519 SUPERFAMILY SSF103473 6 196 3.92E-61 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS05225 52c1f0afedcaf7f150c915ba80538be8 519 SUPERFAMILY SSF103473 247 420 3.92E-61 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS05225 52c1f0afedcaf7f150c915ba80538be8 519 SUPERFAMILY SSF103473 477 508 3.92E-61 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS05225 52c1f0afedcaf7f150c915ba80538be8 519 Pfam PF07690 Major Facilitator Superfamily 16 407 1.5E-45 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS05225 52c1f0afedcaf7f150c915ba80538be8 519 Gene3D G3DSA:1.20.1250.20 257 421 1.5E-13 T 23-04-2016 RR42_RS05225 52c1f0afedcaf7f150c915ba80538be8 519 Gene3D G3DSA:1.20.1250.20 480 507 1.5E-13 T 23-04-2016 RR42_RS05225 52c1f0afedcaf7f150c915ba80538be8 519 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RR42_RS05225 52c1f0afedcaf7f150c915ba80538be8 519 PRINTS PR01036 Tetracycline resistance protein TetB signature 401 420 2.7E-7 T 23-04-2016 RR42_RS05225 52c1f0afedcaf7f150c915ba80538be8 519 PRINTS PR01036 Tetracycline resistance protein TetB signature 202 220 2.7E-7 T 23-04-2016 RR42_RS05225 52c1f0afedcaf7f150c915ba80538be8 519 PRINTS PR01036 Tetracycline resistance protein TetB signature 137 161 2.7E-7 T 23-04-2016 RR42_RS05225 52c1f0afedcaf7f150c915ba80538be8 519 PRINTS PR01036 Tetracycline resistance protein TetB signature 75 97 2.7E-7 T 23-04-2016 RR42_RS05225 52c1f0afedcaf7f150c915ba80538be8 519 Gene3D G3DSA:1.20.1250.20 13 194 1.2E-27 T 23-04-2016 RR42_RS05225 52c1f0afedcaf7f150c915ba80538be8 519 PANTHER PTHR23501:SF7 2 510 6.8E-106 T 23-04-2016 RR42_RS05225 52c1f0afedcaf7f150c915ba80538be8 519 PANTHER PTHR23501 2 510 6.8E-106 T 23-04-2016 RR42_RS15575 72690eee92fb0e8ac65698a02f99b4ea 173 PANTHER PTHR11078 34 165 6.2E-33 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 RR42_RS15575 72690eee92fb0e8ac65698a02f99b4ea 173 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 36 163 2.7E-36 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 RR42_RS15575 72690eee92fb0e8ac65698a02f99b4ea 173 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 34 165 20.039 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 RR42_RS15575 72690eee92fb0e8ac65698a02f99b4ea 173 Pfam PF01029 NusB family 38 161 1.1E-30 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RR42_RS15575 72690eee92fb0e8ac65698a02f99b4ea 173 Gene3D G3DSA:1.10.940.10 34 167 2.7E-36 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RR42_RS15575 72690eee92fb0e8ac65698a02f99b4ea 173 SUPERFAMILY SSF48013 33 165 2.88E-38 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RR42_RS15895 a4663fdb26a90b9b3ed73f15a355f80b 720 Pfam PF02602 Uroporphyrinogen-III synthase HemD 17 282 1.1E-34 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS15895 a4663fdb26a90b9b3ed73f15a355f80b 720 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 374 717 4.4E-55 T 23-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX RR42_RS15895 a4663fdb26a90b9b3ed73f15a355f80b 720 SUPERFAMILY SSF69618 4 290 2.35E-46 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RR42_RS15895 a4663fdb26a90b9b3ed73f15a355f80b 720 Gene3D G3DSA:3.40.50.10090 160 289 2.3E-13 T 23-04-2016 RR42_RS15895 a4663fdb26a90b9b3ed73f15a355f80b 720 Gene3D G3DSA:3.40.50.10090 5 109 4.6E-16 T 23-04-2016 RR42_RS15895 a4663fdb26a90b9b3ed73f15a355f80b 720 PANTHER PTHR38043 333 562 3.3E-29 T 23-04-2016 RR42_RS15895 a4663fdb26a90b9b3ed73f15a355f80b 720 PANTHER PTHR38043 593 717 3.3E-29 T 23-04-2016 RR42_RS02520 9b46b72fc91400d6f81b11ed147296ed 318 PANTHER PTHR33434 6 307 6.3E-22 T 23-04-2016 RR42_RS02520 9b46b72fc91400d6f81b11ed147296ed 318 PANTHER PTHR33434:SF2 6 307 6.3E-22 T 23-04-2016 RR42_RS02520 9b46b72fc91400d6f81b11ed147296ed 318 Gene3D G3DSA:3.40.50.10440 1 29 3.3E-17 T 23-04-2016 RR42_RS02520 9b46b72fc91400d6f81b11ed147296ed 318 Gene3D G3DSA:3.40.50.10440 70 168 3.3E-17 T 23-04-2016 RR42_RS02520 9b46b72fc91400d6f81b11ed147296ed 318 SUPERFAMILY SSF82549 1 311 1.46E-44 T 23-04-2016 RR42_RS02520 9b46b72fc91400d6f81b11ed147296ed 318 Gene3D G3DSA:3.30.1180.10 174 310 1.8E-16 T 23-04-2016 RR42_RS02520 9b46b72fc91400d6f81b11ed147296ed 318 Pfam PF02645 Uncharacterised protein, DegV family COG1307 5 310 2.6E-35 T 23-04-2016 IPR003797 DegV RR42_RS36175 4e7f8d9e5e6869182a5cbe89f1c817f8 36 Gene3D G3DSA:3.40.50.720 3 36 9.4E-9 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS36175 4e7f8d9e5e6869182a5cbe89f1c817f8 36 SUPERFAMILY SSF51735 3 36 6.97E-9 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS36175 4e7f8d9e5e6869182a5cbe89f1c817f8 36 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 34 1.5E-5 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RR42_RS15155 247569b97a370ffcf1158ee41058d706 406 Pfam PF02515 CoA-transferase family III 4 382 2.8E-135 T 23-04-2016 IPR003673 CoA-transferase family III GO:0003824 RR42_RS15155 247569b97a370ffcf1158ee41058d706 406 Gene3D G3DSA:3.40.50.10540 2 226 3.8E-123 T 23-04-2016 IPR023606 CoA-transferase family III domain RR42_RS15155 247569b97a370ffcf1158ee41058d706 406 Gene3D G3DSA:3.40.50.10540 315 406 3.8E-123 T 23-04-2016 IPR023606 CoA-transferase family III domain RR42_RS15155 247569b97a370ffcf1158ee41058d706 406 PANTHER PTHR24023:SF593 31 393 1.8E-43 T 23-04-2016 RR42_RS15155 247569b97a370ffcf1158ee41058d706 406 Gene3D G3DSA:3.30.1540.10 232 314 1.2E-37 T 23-04-2016 RR42_RS15155 247569b97a370ffcf1158ee41058d706 406 PANTHER PTHR24023 31 393 1.8E-43 T 23-04-2016 RR42_RS15155 247569b97a370ffcf1158ee41058d706 406 SUPERFAMILY SSF89796 1 406 3.27E-149 T 23-04-2016 IPR023606 CoA-transferase family III domain RR42_RS02765 4daa9655f58bc6126afca48c3ed80a8c 344 SUPERFAMILY SSF56112 10 330 6.56E-57 T 23-04-2016 IPR011009 Protein kinase-like domain RR42_RS02765 4daa9655f58bc6126afca48c3ed80a8c 344 PANTHER PTHR33540:SF1 20 338 1.4E-106 T 23-04-2016 RR42_RS02765 4daa9655f58bc6126afca48c3ed80a8c 344 Gene3D G3DSA:3.90.1200.10 104 333 4.9E-72 T 23-04-2016 RR42_RS02765 4daa9655f58bc6126afca48c3ed80a8c 344 PANTHER PTHR33540 20 338 1.4E-106 T 23-04-2016 RR42_RS02765 4daa9655f58bc6126afca48c3ed80a8c 344 Pfam PF01636 Phosphotransferase enzyme family 31 258 1.3E-31 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase RR42_RS02765 4daa9655f58bc6126afca48c3ed80a8c 344 Gene3D G3DSA:3.30.200.20 7 102 1.2E-29 T 23-04-2016 RR42_RS19015 c71c4f162f15453210ed96ab83d9a911 724 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 279 718 1.3E-151 T 23-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 RR42_RS19015 c71c4f162f15453210ed96ab83d9a911 724 SMART SM00965 304 352 1.3E-8 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 RR42_RS19015 c71c4f162f15453210ed96ab83d9a911 724 Pfam PF11741 AMIN domain 48 129 2.4E-6 T 23-04-2016 IPR021731 AMIN domain RR42_RS19015 c71c4f162f15453210ed96ab83d9a911 724 Pfam PF07660 Secretin and TonB N terminus short domain 305 352 8.2E-9 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 RR42_RS19015 c71c4f162f15453210ed96ab83d9a911 724 PRINTS PR00811 Bacterial general secretion pathway protein D signature 559 583 1.1E-20 T 23-04-2016 IPR001775 GspD/PilQ family RR42_RS19015 c71c4f162f15453210ed96ab83d9a911 724 PRINTS PR00811 Bacterial general secretion pathway protein D signature 682 700 1.1E-20 T 23-04-2016 IPR001775 GspD/PilQ family RR42_RS19015 c71c4f162f15453210ed96ab83d9a911 724 PRINTS PR00811 Bacterial general secretion pathway protein D signature 473 483 1.1E-20 T 23-04-2016 IPR001775 GspD/PilQ family RR42_RS19015 c71c4f162f15453210ed96ab83d9a911 724 PRINTS PR00811 Bacterial general secretion pathway protein D signature 705 719 1.1E-20 T 23-04-2016 IPR001775 GspD/PilQ family RR42_RS19015 c71c4f162f15453210ed96ab83d9a911 724 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 663 696 - T 23-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 RR42_RS19015 c71c4f162f15453210ed96ab83d9a911 724 Pfam PF03958 Bacterial type II/III secretion system short domain 378 473 5.2E-13 T 23-04-2016 IPR005644 NolW-like RR42_RS19015 c71c4f162f15453210ed96ab83d9a911 724 Pfam PF00263 Bacterial type II and III secretion system protein 563 717 2.4E-48 T 23-04-2016 IPR004846 Type II/III secretion system GO:0009306 RR42_RS19015 c71c4f162f15453210ed96ab83d9a911 724 PANTHER PTHR30604 99 396 7.4E-104 T 23-04-2016 RR42_RS19015 c71c4f162f15453210ed96ab83d9a911 724 PANTHER PTHR30604 425 723 7.4E-104 T 23-04-2016 RR42_RS00615 39cff747677e2c961c911827f7de0f30 374 PANTHER PTHR30349:SF17 24 342 1.1E-98 T 23-04-2016 RR42_RS00615 39cff747677e2c961c911827f7de0f30 374 Gene3D G3DSA:1.10.150.130 25 119 1.4E-21 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal RR42_RS00615 39cff747677e2c961c911827f7de0f30 374 PANTHER PTHR30349 24 342 1.1E-98 T 23-04-2016 RR42_RS00615 39cff747677e2c961c911827f7de0f30 374 Pfam PF00589 Phage integrase family 136 317 1.5E-35 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RR42_RS00615 39cff747677e2c961c911827f7de0f30 374 SUPERFAMILY SSF56349 128 329 1.59E-46 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RR42_RS00615 39cff747677e2c961c911827f7de0f30 374 SUPERFAMILY SSF47823 23 110 1.96E-13 T 23-04-2016 IPR010998 Integrase, Lambda-type, N-terminal RR42_RS00615 39cff747677e2c961c911827f7de0f30 374 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 21 331 32.532 T 23-04-2016 IPR023009 Tyrosine recombinase XerC/XerD RR42_RS00615 39cff747677e2c961c911827f7de0f30 374 Gene3D G3DSA:1.10.443.10 132 325 2.1E-48 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RR42_RS00615 39cff747677e2c961c911827f7de0f30 374 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 26 108 1.9E-17 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RR42_RS18470 b8604513d710dc97edbd6600de214167 360 SMART SM00937 67 178 2.3E-61 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RR42_RS18470 b8604513d710dc97edbd6600de214167 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 356 2.5E-163 T 23-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 RR42_RS18470 b8604513d710dc97edbd6600de214167 360 Gene3D G3DSA:1.20.58.410 7 93 5.5E-16 T 23-04-2016 RR42_RS18470 b8604513d710dc97edbd6600de214167 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RR42_RS18470 b8604513d710dc97edbd6600de214167 360 Pfam PF00472 RF-1 domain 213 321 1.6E-43 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RR42_RS18470 b8604513d710dc97edbd6600de214167 360 PANTHER PTHR11075 1 356 4.1E-174 T 23-04-2016 RR42_RS18470 b8604513d710dc97edbd6600de214167 360 PANTHER PTHR11075:SF9 1 356 4.1E-174 T 23-04-2016 RR42_RS18470 b8604513d710dc97edbd6600de214167 360 Gene3D G3DSA:3.30.160.20 213 288 8.7E-37 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain RR42_RS18470 b8604513d710dc97edbd6600de214167 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 40.247 T 23-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 RR42_RS18470 b8604513d710dc97edbd6600de214167 360 Pfam PF03462 PCRF domain 13 203 1.7E-71 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RR42_RS18470 b8604513d710dc97edbd6600de214167 360 SUPERFAMILY SSF75620 12 353 8.76E-137 T 23-04-2016 RR42_RS12555 a4d1e228ec859da1935ad49f062d39ea 154 PIRSF PIRSF000239 1 154 1.6E-30 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 RR42_RS12555 a4d1e228ec859da1935ad49f062d39ea 154 Pfam PF00578 AhpC/TSA family 8 133 3.9E-33 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 RR42_RS12555 a4d1e228ec859da1935ad49f062d39ea 154 PANTHER PTHR10681 1 154 3.3E-42 T 23-04-2016 RR42_RS12555 a4d1e228ec859da1935ad49f062d39ea 154 SUPERFAMILY SSF52833 6 154 2.54E-48 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS12555 a4d1e228ec859da1935ad49f062d39ea 154 Gene3D G3DSA:3.40.30.10 5 153 1.6E-45 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS11450 f4dceec47cc83646e0d59de729f03fac 311 SMART SM00849 47 235 1.6E-6 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS11450 f4dceec47cc83646e0d59de729f03fac 311 Gene3D G3DSA:3.60.15.10 23 254 4.0E-31 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS11450 f4dceec47cc83646e0d59de729f03fac 311 Pfam PF00753 Metallo-beta-lactamase superfamily 51 233 2.5E-9 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS11450 f4dceec47cc83646e0d59de729f03fac 311 SUPERFAMILY SSF56281 21 295 3.22E-36 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS12420 8bf6c4e599e768749bb04a82562656c9 384 SUPERFAMILY SSF89796 7 382 9.94E-119 T 23-04-2016 IPR023606 CoA-transferase family III domain RR42_RS12420 8bf6c4e599e768749bb04a82562656c9 384 PANTHER PTHR24023:SF593 57 381 2.4E-30 T 23-04-2016 RR42_RS12420 8bf6c4e599e768749bb04a82562656c9 384 PANTHER PTHR24023 57 381 2.4E-30 T 23-04-2016 RR42_RS12420 8bf6c4e599e768749bb04a82562656c9 384 Gene3D G3DSA:3.40.50.10540 8 214 1.4E-93 T 23-04-2016 IPR023606 CoA-transferase family III domain RR42_RS12420 8bf6c4e599e768749bb04a82562656c9 384 Gene3D G3DSA:3.40.50.10540 304 381 1.4E-93 T 23-04-2016 IPR023606 CoA-transferase family III domain RR42_RS12420 8bf6c4e599e768749bb04a82562656c9 384 Pfam PF02515 CoA-transferase family III 10 371 1.6E-113 T 23-04-2016 IPR003673 CoA-transferase family III GO:0003824 RR42_RS12420 8bf6c4e599e768749bb04a82562656c9 384 Gene3D G3DSA:3.30.1540.10 220 303 3.3E-21 T 23-04-2016 RR42_RS05305 7169f3f36118ce7e57c4786363d02d51 268 PANTHER PTHR14239:SF9 16 243 1.3E-31 T 23-04-2016 RR42_RS05305 7169f3f36118ce7e57c4786363d02d51 268 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 55 144 5.6E-18 T 23-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal RR42_RS05305 7169f3f36118ce7e57c4786363d02d51 268 PANTHER PTHR14239 16 243 1.3E-31 T 23-04-2016 RR42_RS05305 7169f3f36118ce7e57c4786363d02d51 268 SUPERFAMILY SSF51735 55 253 1.92E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS05305 7169f3f36118ce7e57c4786363d02d51 268 Gene3D G3DSA:3.40.50.720 55 254 2.0E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS16890 3abdd47bda95ae55d4e517338d4f678f 391 Pfam PF14321 Domain of unknown function (DUF4382) 37 188 5.3E-39 T 23-04-2016 IPR025491 Domain of unknown function DUF4382 RR42_RS01320 b52c3df0d6aba5cee241a203a2b31125 258 Pfam PF13476 AAA domain 37 81 8.3E-9 T 23-04-2016 RR42_RS01320 b52c3df0d6aba5cee241a203a2b31125 258 SUPERFAMILY SSF52540 37 221 2.97E-25 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01320 b52c3df0d6aba5cee241a203a2b31125 258 SMART SM00382 39 214 2.3E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS01320 b52c3df0d6aba5cee241a203a2b31125 258 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 148 204 4.2E-9 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RR42_RS01320 b52c3df0d6aba5cee241a203a2b31125 258 Gene3D G3DSA:3.40.50.300 37 74 3.9E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01320 b52c3df0d6aba5cee241a203a2b31125 258 Gene3D G3DSA:3.40.50.300 135 220 4.3E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS08760 c3aa82a748edeea44bb20f750f0665ff 221 SMART SM00448 3 116 8.3E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS08760 c3aa82a748edeea44bb20f750f0665ff 221 ProSitePatterns PS00622 LuxR-type HTH domain signature. 172 199 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS08760 c3aa82a748edeea44bb20f750f0665ff 221 Gene3D G3DSA:1.10.10.10 122 218 3.0E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS08760 c3aa82a748edeea44bb20f750f0665ff 221 SUPERFAMILY SSF46894 149 218 7.48E-21 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS08760 c3aa82a748edeea44bb20f750f0665ff 221 PANTHER PTHR26402:SF151 3 217 3.0E-74 T 23-04-2016 RR42_RS08760 c3aa82a748edeea44bb20f750f0665ff 221 Gene3D G3DSA:3.40.50.2300 2 121 3.5E-34 T 23-04-2016 RR42_RS08760 c3aa82a748edeea44bb20f750f0665ff 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 212 5.6E-20 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS08760 c3aa82a748edeea44bb20f750f0665ff 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 4.4E-14 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS08760 c3aa82a748edeea44bb20f750f0665ff 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 4.4E-14 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS08760 c3aa82a748edeea44bb20f750f0665ff 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 4.4E-14 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS08760 c3aa82a748edeea44bb20f750f0665ff 221 Pfam PF00072 Response regulator receiver domain 5 116 2.1E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS08760 c3aa82a748edeea44bb20f750f0665ff 221 SMART SM00421 155 212 8.4E-23 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS08760 c3aa82a748edeea44bb20f750f0665ff 221 PANTHER PTHR26402 3 217 3.0E-74 T 23-04-2016 RR42_RS08760 c3aa82a748edeea44bb20f750f0665ff 221 SUPERFAMILY SSF52172 2 132 6.26E-34 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 Gene3D G3DSA:1.20.120.520 618 760 8.0E-10 T 23-04-2016 RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 69 611 1.4E-153 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 SUPERFAMILY SSF81665 219 304 3.27E-13 T 23-04-2016 RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 SUPERFAMILY SSF81665 555 592 3.27E-13 T 23-04-2016 RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 SUPERFAMILY SSF81665 74 123 3.27E-13 T 23-04-2016 RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 SUPERFAMILY SSF81653 122 218 7.85E-19 T 23-04-2016 RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 Gene3D G3DSA:3.40.50.1000 437 565 3.7E-38 T 23-04-2016 IPR023214 HAD-like domain RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 Gene3D G3DSA:3.40.50.1000 283 325 3.7E-38 T 23-04-2016 IPR023214 HAD-like domain RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 92 331 2.2E-30 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 413 588 6.8E-33 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 312 318 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 PANTHER PTHR24093 60 581 2.7E-110 T 23-04-2016 RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 168 182 1.4E-23 T 23-04-2016 RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 533 545 1.4E-23 T 23-04-2016 RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 434 445 1.4E-23 T 23-04-2016 RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 310 324 1.4E-23 T 23-04-2016 RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 457 467 1.4E-23 T 23-04-2016 RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 509 528 1.4E-23 T 23-04-2016 RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 509 525 2.0E-5 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 541 566 2.0E-5 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 Pfam PF00702 haloacid dehalogenase-like hydrolase 307 523 2.7E-28 T 23-04-2016 RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 Pfam PF01814 Hemerythrin HHE cation binding domain 629 761 3.6E-14 T 23-04-2016 IPR012312 Haemerythrin-like RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 SUPERFAMILY SSF56784 308 328 5.5E-44 T 23-04-2016 IPR023214 HAD-like domain RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 SUPERFAMILY SSF56784 367 610 5.5E-44 T 23-04-2016 IPR023214 HAD-like domain RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 Gene3D G3DSA:2.70.150.10 73 218 1.5E-19 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 Pfam PF00122 E1-E2 ATPase 90 301 6.1E-50 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 ProSitePatterns PS01229 Hypothetical cof family signature 2. 509 531 - T 23-04-2016 RR42_RS09625 1a4026b5919ce3ab551d62f139f1b7e0 766 Gene3D G3DSA:3.40.1110.10 326 436 2.2E-11 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RR42_RS00530 de1a835a2c359985cc60533b9537931e 248 Pfam PF08238 Sel1 repeat 123 151 5.6E-6 T 23-04-2016 IPR006597 Sel1-like repeat RR42_RS00530 de1a835a2c359985cc60533b9537931e 248 Pfam PF08238 Sel1 repeat 82 114 4.1E-6 T 23-04-2016 IPR006597 Sel1-like repeat RR42_RS00530 de1a835a2c359985cc60533b9537931e 248 Pfam PF08238 Sel1 repeat 153 187 1.5E-7 T 23-04-2016 IPR006597 Sel1-like repeat RR42_RS00530 de1a835a2c359985cc60533b9537931e 248 Pfam PF08238 Sel1 repeat 190 225 1.2E-7 T 23-04-2016 IPR006597 Sel1-like repeat RR42_RS00530 de1a835a2c359985cc60533b9537931e 248 SMART SM00671 188 225 2.1E-7 T 23-04-2016 IPR006597 Sel1-like repeat RR42_RS00530 de1a835a2c359985cc60533b9537931e 248 SMART SM00671 152 187 1.8E-6 T 23-04-2016 IPR006597 Sel1-like repeat RR42_RS00530 de1a835a2c359985cc60533b9537931e 248 SMART SM00671 116 151 2.0E-7 T 23-04-2016 IPR006597 Sel1-like repeat RR42_RS00530 de1a835a2c359985cc60533b9537931e 248 SMART SM00671 80 115 9.1E-5 T 23-04-2016 IPR006597 Sel1-like repeat RR42_RS00530 de1a835a2c359985cc60533b9537931e 248 PANTHER PTHR11102 1 17 1.6E-44 T 23-04-2016 RR42_RS00530 de1a835a2c359985cc60533b9537931e 248 PANTHER PTHR11102 58 239 1.6E-44 T 23-04-2016 RR42_RS00530 de1a835a2c359985cc60533b9537931e 248 SUPERFAMILY SSF81901 53 233 5.14E-42 T 23-04-2016 RR42_RS00530 de1a835a2c359985cc60533b9537931e 248 Gene3D G3DSA:1.25.40.10 40 148 2.1E-26 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS00530 de1a835a2c359985cc60533b9537931e 248 Gene3D G3DSA:1.25.40.10 149 233 2.3E-26 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS04765 23133889a6293ae0af5e30f38036715c 262 SUPERFAMILY SSF51735 6 257 6.8E-67 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS04765 23133889a6293ae0af5e30f38036715c 262 PANTHER PTHR24319 1 256 3.5E-63 T 23-04-2016 RR42_RS04765 23133889a6293ae0af5e30f38036715c 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 7.1E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS04765 23133889a6293ae0af5e30f38036715c 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 7.1E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS04765 23133889a6293ae0af5e30f38036715c 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 7.1E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS04765 23133889a6293ae0af5e30f38036715c 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 6.6E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS04765 23133889a6293ae0af5e30f38036715c 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 6.6E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS04765 23133889a6293ae0af5e30f38036715c 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.6E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS04765 23133889a6293ae0af5e30f38036715c 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 6.6E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS04765 23133889a6293ae0af5e30f38036715c 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 6.6E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS04765 23133889a6293ae0af5e30f38036715c 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 6.6E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS04765 23133889a6293ae0af5e30f38036715c 262 Gene3D G3DSA:3.40.50.720 2 257 7.6E-68 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS04765 23133889a6293ae0af5e30f38036715c 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 256 8.5E-46 T 23-04-2016 RR42_RS04765 23133889a6293ae0af5e30f38036715c 262 PANTHER PTHR24319:SF23 1 256 3.5E-63 T 23-04-2016 RR42_RS15040 76c8b4d1a8bb09f613d82d157779aa2f 290 PANTHER PTHR17630 53 288 3.1E-95 T 23-04-2016 RR42_RS15040 76c8b4d1a8bb09f613d82d157779aa2f 290 Gene3D G3DSA:3.40.50.1820 52 288 3.6E-67 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS15040 76c8b4d1a8bb09f613d82d157779aa2f 290 PANTHER PTHR17630:SF42 53 288 3.1E-95 T 23-04-2016 RR42_RS15040 76c8b4d1a8bb09f613d82d157779aa2f 290 SUPERFAMILY SSF53474 52 288 5.6E-48 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS15040 76c8b4d1a8bb09f613d82d157779aa2f 290 Pfam PF01738 Dienelactone hydrolase family 62 288 8.0E-63 T 23-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 RR42_RS02830 60cf44dc2df81f3260f53167efc2e91a 316 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 4 303 3.1E-145 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RR42_RS02830 60cf44dc2df81f3260f53167efc2e91a 316 Gene3D G3DSA:1.20.58.180 214 309 2.2E-35 T 23-04-2016 RR42_RS02830 60cf44dc2df81f3260f53167efc2e91a 316 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 77 97 3.5E-58 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RR42_RS02830 60cf44dc2df81f3260f53167efc2e91a 316 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 56 71 3.5E-58 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RR42_RS02830 60cf44dc2df81f3260f53167efc2e91a 316 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 157 172 3.5E-58 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RR42_RS02830 60cf44dc2df81f3260f53167efc2e91a 316 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 134 154 3.5E-58 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RR42_RS02830 60cf44dc2df81f3260f53167efc2e91a 316 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 108 132 3.5E-58 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RR42_RS02830 60cf44dc2df81f3260f53167efc2e91a 316 PANTHER PTHR30075 2 313 2.6E-233 T 23-04-2016 RR42_RS02830 60cf44dc2df81f3260f53167efc2e91a 316 SUPERFAMILY SSF55681 3 304 8.52E-127 T 23-04-2016 RR42_RS02830 60cf44dc2df81f3260f53167efc2e91a 316 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 2 304 60.66 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RR42_RS02830 60cf44dc2df81f3260f53167efc2e91a 316 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 3 311 1.4E-152 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RR42_RS02830 60cf44dc2df81f3260f53167efc2e91a 316 Gene3D G3DSA:3.30.930.10 1 212 8.5E-104 T 23-04-2016 RR42_RS01100 58f820c48a211903ff8d7a6b9bb6034c 311 SUPERFAMILY SSF46785 6 82 9.98E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS01100 58f820c48a211903ff8d7a6b9bb6034c 311 Gene3D G3DSA:3.40.190.10 90 172 2.1E-33 T 23-04-2016 RR42_RS01100 58f820c48a211903ff8d7a6b9bb6034c 311 Gene3D G3DSA:3.40.190.10 273 299 2.1E-33 T 23-04-2016 RR42_RS01100 58f820c48a211903ff8d7a6b9bb6034c 311 PANTHER PTHR30118:SF8 1 307 5.3E-99 T 23-04-2016 RR42_RS01100 58f820c48a211903ff8d7a6b9bb6034c 311 PANTHER PTHR30118 1 307 5.3E-99 T 23-04-2016 RR42_RS01100 58f820c48a211903ff8d7a6b9bb6034c 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.2E-15 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS01100 58f820c48a211903ff8d7a6b9bb6034c 311 SUPERFAMILY SSF53850 90 297 1.74E-38 T 23-04-2016 RR42_RS01100 58f820c48a211903ff8d7a6b9bb6034c 311 Pfam PF03466 LysR substrate binding domain 95 296 1.3E-20 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS01100 58f820c48a211903ff8d7a6b9bb6034c 311 Gene3D G3DSA:1.10.10.10 2 84 1.7E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS01100 58f820c48a211903ff8d7a6b9bb6034c 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 9.5E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS01100 58f820c48a211903ff8d7a6b9bb6034c 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 9.5E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS01100 58f820c48a211903ff8d7a6b9bb6034c 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 9.5E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS01100 58f820c48a211903ff8d7a6b9bb6034c 311 Gene3D G3DSA:3.40.190.10 173 269 5.8E-19 T 23-04-2016 RR42_RS20195 f29dd62b0a07cc7320cf8df6f0aa171c 166 Pfam PF03899 ATP synthase I chain 57 153 6.7E-15 T 23-04-2016 IPR005598 ATP synthase protein I RR42_RS12245 bd2581235cb616d368e49042de80c644 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.0E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS12245 bd2581235cb616d368e49042de80c644 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.0E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS12245 bd2581235cb616d368e49042de80c644 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.0E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS12245 bd2581235cb616d368e49042de80c644 315 Gene3D G3DSA:3.40.190.10 92 179 1.1E-22 T 23-04-2016 RR42_RS12245 bd2581235cb616d368e49042de80c644 315 PANTHER PTHR30126:SF6 1 309 1.3E-135 T 23-04-2016 RR42_RS12245 bd2581235cb616d368e49042de80c644 315 Gene3D G3DSA:3.40.190.10 180 260 2.9E-25 T 23-04-2016 RR42_RS12245 bd2581235cb616d368e49042de80c644 315 Pfam PF03466 LysR substrate binding domain 89 294 7.2E-45 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS12245 bd2581235cb616d368e49042de80c644 315 SUPERFAMILY SSF53850 92 298 6.21E-44 T 23-04-2016 RR42_RS12245 bd2581235cb616d368e49042de80c644 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 5.0E-15 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS12245 bd2581235cb616d368e49042de80c644 315 SUPERFAMILY SSF46785 11 112 1.26E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS12245 bd2581235cb616d368e49042de80c644 315 PANTHER PTHR30126 1 309 1.3E-135 T 23-04-2016 RR42_RS12245 bd2581235cb616d368e49042de80c644 315 Gene3D G3DSA:1.10.10.10 1 82 4.1E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19450 8652b23d24e2672d42cba4ec03cdb185 604 Gene3D G3DSA:3.40.50.720 399 535 6.6E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS19450 8652b23d24e2672d42cba4ec03cdb185 604 PANTHER PTHR16254 1 561 1.3E-223 T 23-04-2016 RR42_RS19450 8652b23d24e2672d42cba4ec03cdb185 604 Pfam PF00999 Sodium/hydrogen exchanger family 10 377 7.0E-61 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RR42_RS19450 8652b23d24e2672d42cba4ec03cdb185 604 SUPERFAMILY SSF51735 406 536 4.45E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS19450 8652b23d24e2672d42cba4ec03cdb185 604 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 288 3.8E-84 T 23-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 RR42_RS19450 8652b23d24e2672d42cba4ec03cdb185 604 Pfam PF02254 TrkA-N domain 407 517 3.4E-22 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RR42_RS19450 8652b23d24e2672d42cba4ec03cdb185 604 PANTHER PTHR16254:SF6 1 561 1.3E-223 T 23-04-2016 RR42_RS10835 d3388019c4fa49e4aa2f1bdd468d3e53 179 SUPERFAMILY SSF69118 23 164 4.73E-24 T 23-04-2016 IPR029032 AhpD-like RR42_RS10835 d3388019c4fa49e4aa2f1bdd468d3e53 179 Gene3D G3DSA:1.20.1290.10 52 164 7.7E-21 T 23-04-2016 IPR029032 AhpD-like RR42_RS10835 d3388019c4fa49e4aa2f1bdd468d3e53 179 TIGRFAM TIGR04029 CMD_Avi_7170: CMD domain protein, Avi_7170 family 10 166 6.9E-31 T 23-04-2016 IPR023982 Conserved hypothetical protein CHP04029, CMD-like RR42_RS06730 0a0fb68912a024b48458b3bb2d825115 278 Pfam PF12705 PD-(D/E)XK nuclease superfamily 18 275 2.3E-15 T 23-04-2016 RR42_RS03860 10792f4a1eff1ef63791c67a28fe4fb8 359 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 35 45 4.0E-5 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RR42_RS03860 10792f4a1eff1ef63791c67a28fe4fb8 359 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 45 55 4.0E-5 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RR42_RS03860 10792f4a1eff1ef63791c67a28fe4fb8 359 Gene3D G3DSA:3.40.50.2300 93 201 2.7E-32 T 23-04-2016 RR42_RS03860 10792f4a1eff1ef63791c67a28fe4fb8 359 SMART SM00354 33 103 3.0E-24 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RR42_RS03860 10792f4a1eff1ef63791c67a28fe4fb8 359 Gene3D G3DSA:1.10.260.40 34 92 3.6E-22 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS03860 10792f4a1eff1ef63791c67a28fe4fb8 359 Pfam PF13377 Periplasmic binding protein-like domain 200 358 4.7E-30 T 23-04-2016 RR42_RS03860 10792f4a1eff1ef63791c67a28fe4fb8 359 PANTHER PTHR30146 33 358 6.1E-128 T 23-04-2016 RR42_RS03860 10792f4a1eff1ef63791c67a28fe4fb8 359 Pfam PF00356 Bacterial regulatory proteins, lacI family 35 80 2.4E-15 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RR42_RS03860 10792f4a1eff1ef63791c67a28fe4fb8 359 ProSitePatterns PS00356 LacI-type HTH domain signature. 36 54 - T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RR42_RS03860 10792f4a1eff1ef63791c67a28fe4fb8 359 Gene3D G3DSA:3.40.50.2300 202 358 1.8E-42 T 23-04-2016 RR42_RS03860 10792f4a1eff1ef63791c67a28fe4fb8 359 SUPERFAMILY SSF53822 90 346 4.57E-54 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RR42_RS03860 10792f4a1eff1ef63791c67a28fe4fb8 359 SUPERFAMILY SSF47413 33 91 3.84E-16 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS03860 10792f4a1eff1ef63791c67a28fe4fb8 359 PANTHER PTHR30146:SF2 33 358 6.1E-128 T 23-04-2016 RR42_RS09460 3b09d13fbe75e5425b0aa93787aa2ae4 271 SUPERFAMILY SSF53223 4 102 1.96E-28 T 23-04-2016 RR42_RS09460 3b09d13fbe75e5425b0aa93787aa2ae4 271 PANTHER PTHR21089:SF1 23 271 1.8E-74 T 23-04-2016 RR42_RS09460 3b09d13fbe75e5425b0aa93787aa2ae4 271 Gene3D G3DSA:3.40.192.10 22 107 1.4E-30 T 23-04-2016 RR42_RS09460 3b09d13fbe75e5425b0aa93787aa2ae4 271 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 22 90 8.3E-21 T 23-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 RR42_RS09460 3b09d13fbe75e5425b0aa93787aa2ae4 271 SUPERFAMILY SSF51735 103 265 6.62E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS09460 3b09d13fbe75e5425b0aa93787aa2ae4 271 PANTHER PTHR21089 23 271 1.8E-74 T 23-04-2016 RR42_RS09460 3b09d13fbe75e5425b0aa93787aa2ae4 271 Gene3D G3DSA:3.40.50.720 108 267 3.5E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS09460 3b09d13fbe75e5425b0aa93787aa2ae4 271 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 112 163 3.6E-6 T 23-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RR42_RS16390 a2fde608d3f472c5495b1ee6c0218070 223 Gene3D G3DSA:1.10.3720.10 19 218 3.4E-31 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS16390 a2fde608d3f472c5495b1ee6c0218070 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 217 8.4E-12 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS16390 a2fde608d3f472c5495b1ee6c0218070 223 PANTHER PTHR30614 1 217 8.7E-53 T 23-04-2016 RR42_RS16390 a2fde608d3f472c5495b1ee6c0218070 223 SUPERFAMILY SSF161098 19 214 3.66E-33 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS16390 a2fde608d3f472c5495b1ee6c0218070 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 18 113 4.4E-23 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RR42_RS02770 fd852a9f79663a3a3514274dc8ec11bb 802 PANTHER PTHR30189 90 754 6.1E-60 T 23-04-2016 RR42_RS02770 fd852a9f79663a3a3514274dc8ec11bb 802 Gene3D G3DSA:2.60.450.10 86 241 2.2E-11 T 23-04-2016 RR42_RS02770 fd852a9f79663a3a3514274dc8ec11bb 802 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 43 769 19.846 T 23-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 RR42_RS02770 fd852a9f79663a3a3514274dc8ec11bb 802 Pfam PF04453 Organic solvent tolerance protein 331 707 5.9E-89 T 23-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 RR42_RS18030 3b21c091d0c9cf2165d2c4e249654c1a 311 PANTHER PTHR21666 126 288 1.0E-49 T 23-04-2016 RR42_RS18030 3b21c091d0c9cf2165d2c4e249654c1a 311 SUPERFAMILY SSF51261 92 288 2.77E-60 T 23-04-2016 IPR011055 Duplicated hybrid motif RR42_RS18030 3b21c091d0c9cf2165d2c4e249654c1a 311 Pfam PF01551 Peptidase family M23 190 284 2.0E-34 T 23-04-2016 IPR016047 Peptidase M23 RR42_RS18030 3b21c091d0c9cf2165d2c4e249654c1a 311 Gene3D G3DSA:2.70.70.10 145 288 7.0E-50 T 23-04-2016 RR42_RS13905 43637a010782a334e9b55ff7bcfe0e25 507 PIRSF PIRSF001394 1 507 8.9E-217 T 23-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 RR42_RS13905 43637a010782a334e9b55ff7bcfe0e25 507 PANTHER PTHR30389 1 507 3.0E-299 T 23-04-2016 RR42_RS13905 43637a010782a334e9b55ff7bcfe0e25 507 PANTHER PTHR30389:SF1 1 507 3.0E-299 T 23-04-2016 RR42_RS13905 43637a010782a334e9b55ff7bcfe0e25 507 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 284 1.5E-62 T 23-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 RR42_RS13905 43637a010782a334e9b55ff7bcfe0e25 507 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 327 489 3.8E-48 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RR42_RS13905 43637a010782a334e9b55ff7bcfe0e25 507 SUPERFAMILY SSF117457 319 489 1.16E-61 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RR42_RS13905 43637a010782a334e9b55ff7bcfe0e25 507 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 9.4E-100 T 23-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 RR42_RS13905 43637a010782a334e9b55ff7bcfe0e25 507 Gene3D G3DSA:3.20.130.10 303 489 4.7E-73 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RR42_RS13905 43637a010782a334e9b55ff7bcfe0e25 507 Pfam PF05683 Fumarase C-terminus 289 490 1.2E-82 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RR42_RS17695 7564a63526f296de4ad8d01c2e7d6150 152 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 151 2.2E-55 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 RR42_RS17695 7564a63526f296de4ad8d01c2e7d6150 152 PANTHER PTHR23151 1 151 1.6E-43 T 23-04-2016 RR42_RS17695 7564a63526f296de4ad8d01c2e7d6150 152 Pfam PF00364 Biotin-requiring enzyme 78 151 8.8E-27 T 23-04-2016 IPR000089 Biotin/lipoyl attachment RR42_RS17695 7564a63526f296de4ad8d01c2e7d6150 152 SUPERFAMILY SSF51230 77 151 1.7E-25 T 23-04-2016 IPR011053 Single hybrid motif RR42_RS17695 7564a63526f296de4ad8d01c2e7d6150 152 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 108 125 - T 23-04-2016 IPR001882 Biotin-binding site RR42_RS17695 7564a63526f296de4ad8d01c2e7d6150 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 81 94 2.3E-20 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 RR42_RS17695 7564a63526f296de4ad8d01c2e7d6150 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 98 112 2.3E-20 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 RR42_RS17695 7564a63526f296de4ad8d01c2e7d6150 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 113 126 2.3E-20 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 RR42_RS17695 7564a63526f296de4ad8d01c2e7d6150 152 Gene3D G3DSA:2.40.50.100 77 151 7.1E-33 T 23-04-2016 RR42_RS06390 fd5a1e67240fe89a58319f99159e447e 307 PANTHER PTHR30537 1 295 1.1E-104 T 23-04-2016 RR42_RS06390 fd5a1e67240fe89a58319f99159e447e 307 Gene3D G3DSA:3.40.190.10 180 259 1.3E-8 T 23-04-2016 RR42_RS06390 fd5a1e67240fe89a58319f99159e447e 307 SUPERFAMILY SSF46785 6 87 8.7E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS06390 fd5a1e67240fe89a58319f99159e447e 307 SUPERFAMILY SSF53850 90 297 7.96E-42 T 23-04-2016 RR42_RS06390 fd5a1e67240fe89a58319f99159e447e 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 3.0E-14 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS06390 fd5a1e67240fe89a58319f99159e447e 307 Pfam PF03466 LysR substrate binding domain 89 294 1.4E-43 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS06390 fd5a1e67240fe89a58319f99159e447e 307 Gene3D G3DSA:3.40.190.10 92 179 6.1E-20 T 23-04-2016 RR42_RS06390 fd5a1e67240fe89a58319f99159e447e 307 PANTHER PTHR30537:SF5 1 295 1.1E-104 T 23-04-2016 RR42_RS06390 fd5a1e67240fe89a58319f99159e447e 307 Gene3D G3DSA:1.10.10.10 3 81 7.2E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS09325 b3f9d7a9c20ce662def181d56c9c0351 265 SUPERFAMILY SSF48256 18 238 4.84E-41 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS09325 b3f9d7a9c20ce662def181d56c9c0351 265 PANTHER PTHR11739:SF4 29 243 1.8E-17 T 23-04-2016 RR42_RS09325 b3f9d7a9c20ce662def181d56c9c0351 265 Gene3D G3DSA:1.10.580.10 27 157 4.8E-17 T 23-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 RR42_RS09325 b3f9d7a9c20ce662def181d56c9c0351 265 PANTHER PTHR11739 29 243 1.8E-17 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS09325 b3f9d7a9c20ce662def181d56c9c0351 265 Pfam PF00285 Citrate synthase, C-terminal domain 34 236 4.3E-26 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS08150 d1b2dc321ca4bc07cb37fb1af3b40674 74 Gene3D G3DSA:1.10.8.320 1 63 3.8E-10 T 23-04-2016 RR42_RS08150 d1b2dc321ca4bc07cb37fb1af3b40674 74 SUPERFAMILY SSF47413 1 64 1.96E-11 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS13650 26ae72aa6dda7c67ea3355b64194e6ac 318 Gene3D G3DSA:3.40.50.80 104 216 1.5E-27 T 23-04-2016 RR42_RS13650 26ae72aa6dda7c67ea3355b64194e6ac 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 53 67 4.0E-46 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RR42_RS13650 26ae72aa6dda7c67ea3355b64194e6ac 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 31 41 4.0E-46 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RR42_RS13650 26ae72aa6dda7c67ea3355b64194e6ac 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 41 53 4.0E-46 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RR42_RS13650 26ae72aa6dda7c67ea3355b64194e6ac 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 91 105 4.0E-46 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RR42_RS13650 26ae72aa6dda7c67ea3355b64194e6ac 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 189 197 4.0E-46 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RR42_RS13650 26ae72aa6dda7c67ea3355b64194e6ac 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 138 147 4.0E-46 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RR42_RS13650 26ae72aa6dda7c67ea3355b64194e6ac 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 77 91 4.0E-46 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RR42_RS13650 26ae72aa6dda7c67ea3355b64194e6ac 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 113 132 4.0E-46 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RR42_RS13650 26ae72aa6dda7c67ea3355b64194e6ac 318 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 267 275 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RR42_RS13650 26ae72aa6dda7c67ea3355b64194e6ac 318 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 240 307 2.4E-12 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS13650 26ae72aa6dda7c67ea3355b64194e6ac 318 PANTHER PTHR22924:SF20 21 274 1.4E-62 T 23-04-2016 RR42_RS13650 26ae72aa6dda7c67ea3355b64194e6ac 318 SUPERFAMILY SSF63380 4 101 1.72E-26 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RR42_RS13650 26ae72aa6dda7c67ea3355b64194e6ac 318 Gene3D G3DSA:3.10.20.30 217 316 8.0E-26 T 23-04-2016 IPR012675 Beta-grasp domain RR42_RS13650 26ae72aa6dda7c67ea3355b64194e6ac 318 Pfam PF00175 Oxidoreductase NAD-binding domain 114 201 4.5E-5 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RR42_RS13650 26ae72aa6dda7c67ea3355b64194e6ac 318 SUPERFAMILY SSF54292 213 316 9.31E-26 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS13650 26ae72aa6dda7c67ea3355b64194e6ac 318 PANTHER PTHR22924 21 274 1.4E-62 T 23-04-2016 RR42_RS13650 26ae72aa6dda7c67ea3355b64194e6ac 318 Gene3D G3DSA:2.40.30.10 4 102 2.3E-32 T 23-04-2016 RR42_RS13650 26ae72aa6dda7c67ea3355b64194e6ac 318 SUPERFAMILY SSF52343 99 223 5.24E-28 T 23-04-2016 RR42_RS14765 8992dfb2d140b090b8bd8fe347c73bc7 293 PANTHER PTHR36838 1 293 7.0E-45 T 23-04-2016 RR42_RS14765 8992dfb2d140b090b8bd8fe347c73bc7 293 Pfam PF03547 Membrane transport protein 148 286 4.6E-11 T 23-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 RR42_RS14765 8992dfb2d140b090b8bd8fe347c73bc7 293 PANTHER PTHR36838:SF2 1 293 7.0E-45 T 23-04-2016 RR42_RS04650 09968287d22a85fd9b4111956257dc82 1170 SUPERFAMILY SSF89550 6 270 4.51E-10 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 RR42_RS04650 09968287d22a85fd9b4111956257dc82 1170 Pfam PF01336 OB-fold nucleic acid binding domain 1006 1079 2.2E-6 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RR42_RS04650 09968287d22a85fd9b4111956257dc82 1170 Pfam PF02811 PHP domain 8 180 3.3E-38 T 23-04-2016 IPR004013 PHP domain GO:0003824 RR42_RS04650 09968287d22a85fd9b4111956257dc82 1170 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 298 740 2.2E-175 T 23-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS04650 09968287d22a85fd9b4111956257dc82 1170 Gene3D G3DSA:3.20.20.140 6 263 4.6E-20 T 23-04-2016 RR42_RS04650 09968287d22a85fd9b4111956257dc82 1170 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1040 0.0 T 23-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS04650 09968287d22a85fd9b4111956257dc82 1170 SMART SM00481 7 74 2.4E-22 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 RR42_RS04650 09968287d22a85fd9b4111956257dc82 1170 Pfam PF14579 Helix-hairpin-helix motif 814 902 1.3E-28 T 23-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS04650 09968287d22a85fd9b4111956257dc82 1170 Gene3D G3DSA:2.40.50.140 1004 1082 1.4E-14 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS04650 09968287d22a85fd9b4111956257dc82 1170 PANTHER PTHR32294:SF0 2 1170 0.0 T 23-04-2016 RR42_RS04650 09968287d22a85fd9b4111956257dc82 1170 Gene3D G3DSA:1.10.150.280 840 886 3.4E-4 T 23-04-2016 RR42_RS04650 09968287d22a85fd9b4111956257dc82 1170 PANTHER PTHR32294 2 1170 0.0 T 23-04-2016 RR42_RS10080 20dfa63cb924bf9c762aae7129e99aa5 486 SUPERFAMILY SSF53098 131 289 1.37E-15 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS10080 20dfa63cb924bf9c762aae7129e99aa5 486 Gene3D G3DSA:3.30.420.10 127 287 2.4E-16 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS10080 20dfa63cb924bf9c762aae7129e99aa5 486 Pfam PF13565 Homeodomain-like domain 36 109 1.2E-10 T 23-04-2016 RR42_RS10080 20dfa63cb924bf9c762aae7129e99aa5 486 SUPERFAMILY SSF46689 3 113 7.53E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS06235 a6f90b431e0cde0b3ecfd31844e7e1e0 221 PANTHER PTHR22939 35 202 5.5E-41 T 23-04-2016 RR42_RS06235 a6f90b431e0cde0b3ecfd31844e7e1e0 221 Pfam PF02163 Peptidase family M50 124 177 9.1E-7 T 23-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 RR42_RS06235 a6f90b431e0cde0b3ecfd31844e7e1e0 221 PANTHER PTHR22939:SF104 35 202 5.5E-41 T 23-04-2016 RR42_RS04700 60ab6c9876d1069c1d98ac58a93af5ae 488 PANTHER PTHR30001 1 488 6.2E-193 T 23-04-2016 RR42_RS04700 60ab6c9876d1069c1d98ac58a93af5ae 488 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 1.6E-153 T 23-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 RR42_RS04700 60ab6c9876d1069c1d98ac58a93af5ae 488 Gene3D G3DSA:2.40.50.140 30 125 1.5E-31 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS04700 60ab6c9876d1069c1d98ac58a93af5ae 488 SMART SM00316 37 119 1.5E-5 T 23-04-2016 IPR022967 RNA-binding domain, S1 RR42_RS04700 60ab6c9876d1069c1d98ac58a93af5ae 488 SUPERFAMILY SSF50249 39 125 1.47E-17 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS04700 60ab6c9876d1069c1d98ac58a93af5ae 488 Pfam PF10150 Ribonuclease E/G family 121 392 3.2E-101 T 23-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 RR42_RS08615 d70ef8c5c857542d9d2b842766c6aaa7 103 Pfam PF05449 Putative 3TM holin, Phage_holin_3 8 86 5.2E-27 T 23-04-2016 IPR008473 Putative 3TM holin, Phage holin 3 RR42_RS20670 890535eaec115e90ccd29acfbfdf1c73 202 SUPERFAMILY SSF47616 78 199 6.66E-8 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS20670 890535eaec115e90ccd29acfbfdf1c73 202 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 74 1.2E-19 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RR42_RS20670 890535eaec115e90ccd29acfbfdf1c73 202 SUPERFAMILY SSF52833 1 84 3.34E-16 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS20670 890535eaec115e90ccd29acfbfdf1c73 202 Gene3D G3DSA:3.40.30.10 1 72 2.0E-16 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS20670 890535eaec115e90ccd29acfbfdf1c73 202 PANTHER PTHR11260:SF325 1 201 3.0E-68 T 23-04-2016 RR42_RS20670 890535eaec115e90ccd29acfbfdf1c73 202 Gene3D G3DSA:1.20.1050.10 78 188 8.3E-6 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS20670 890535eaec115e90ccd29acfbfdf1c73 202 PANTHER PTHR11260 1 201 3.0E-68 T 23-04-2016 RR42_RS35530 15e2f4b8db1554188c054a98f20b0dc4 167 SUPERFAMILY SSF51735 1 167 9.59E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS35530 15e2f4b8db1554188c054a98f20b0dc4 167 Pfam PF16363 GDP-mannose 4,6 dehydratase 1 166 9.9E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS35530 15e2f4b8db1554188c054a98f20b0dc4 167 Gene3D G3DSA:3.40.50.720 1 166 1.8E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS35530 15e2f4b8db1554188c054a98f20b0dc4 167 PANTHER PTHR10366 1 167 4.2E-66 T 23-04-2016 RR42_RS35530 15e2f4b8db1554188c054a98f20b0dc4 167 PANTHER PTHR10366:SF41 1 167 4.2E-66 T 23-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 RR42_RS03455 4dcc7579827bd4307891e56b2c9b5e3a 62 Pfam PF03966 Trm112p-like protein 2 41 4.5E-11 T 23-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 RR42_RS03455 4dcc7579827bd4307891e56b2c9b5e3a 62 PANTHER PTHR33505 1 53 1.3E-22 T 23-04-2016 RR42_RS03455 4dcc7579827bd4307891e56b2c9b5e3a 62 Gene3D G3DSA:2.20.25.10 8 52 5.4E-25 T 23-04-2016 RR42_RS03455 4dcc7579827bd4307891e56b2c9b5e3a 62 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 26.881 T 23-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 RR42_RS03455 4dcc7579827bd4307891e56b2c9b5e3a 62 SUPERFAMILY SSF158997 1 52 1.31E-20 T 23-04-2016 RR42_RS29835 ed8c2d8e3990466a5ced3457d7b5a582 428 PANTHER PTHR30451:SF1 1 428 3.4E-157 T 23-04-2016 RR42_RS29835 ed8c2d8e3990466a5ced3457d7b5a582 428 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 11 21 - T 23-04-2016 IPR018030 Fimbrial membrane usher, conserved site RR42_RS29835 ed8c2d8e3990466a5ced3457d7b5a582 428 PANTHER PTHR30451 1 428 3.4E-157 T 23-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RR42_RS29835 ed8c2d8e3990466a5ced3457d7b5a582 428 Pfam PF00577 Outer membrane usher protein 1 427 3.4E-115 T 23-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RR42_RS13450 7bd97d8b813c5fc58e9438fe735dd654 234 Gene3D G3DSA:1.20.58.220 127 232 8.5E-32 T 23-04-2016 RR42_RS13450 7bd97d8b813c5fc58e9438fe735dd654 234 SUPERFAMILY SSF109755 8 229 2.93E-68 T 23-04-2016 RR42_RS13450 7bd97d8b813c5fc58e9438fe735dd654 234 PANTHER PTHR10010:SF14 1 233 1.9E-71 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 RR42_RS13450 7bd97d8b813c5fc58e9438fe735dd654 234 PIRSF PIRSF003107 3 224 4.5E-62 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 RR42_RS13450 7bd97d8b813c5fc58e9438fe735dd654 234 Gene3D G3DSA:1.20.58.220 5 114 6.0E-33 T 23-04-2016 RR42_RS13450 7bd97d8b813c5fc58e9438fe735dd654 234 PANTHER PTHR10010 1 233 1.9E-71 T 23-04-2016 RR42_RS13450 7bd97d8b813c5fc58e9438fe735dd654 234 Pfam PF01895 PhoU domain 130 210 7.7E-16 T 23-04-2016 IPR026022 PhoU domain RR42_RS13450 7bd97d8b813c5fc58e9438fe735dd654 234 Pfam PF01895 PhoU domain 21 109 2.2E-20 T 23-04-2016 IPR026022 PhoU domain RR42_RS13450 7bd97d8b813c5fc58e9438fe735dd654 234 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 8 220 3.9E-71 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 RR42_RS17115 ca9d8b73b6fc6f142b64bafa9870d878 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 7.6E-31 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RR42_RS17115 ca9d8b73b6fc6f142b64bafa9870d878 68 PRINTS PR00050 Cold shock protein signature 40 58 2.0E-16 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RR42_RS17115 ca9d8b73b6fc6f142b64bafa9870d878 68 PRINTS PR00050 Cold shock protein signature 25 34 2.0E-16 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RR42_RS17115 ca9d8b73b6fc6f142b64bafa9870d878 68 PRINTS PR00050 Cold shock protein signature 4 19 2.0E-16 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RR42_RS17115 ca9d8b73b6fc6f142b64bafa9870d878 68 SMART SM00357 3 67 1.6E-28 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 RR42_RS17115 ca9d8b73b6fc6f142b64bafa9870d878 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 23-04-2016 IPR019844 Cold-shock conserved site RR42_RS17115 ca9d8b73b6fc6f142b64bafa9870d878 68 Gene3D G3DSA:2.40.50.140 1 65 8.0E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS17115 ca9d8b73b6fc6f142b64bafa9870d878 68 PIRSF PIRSF002599 1 68 1.1E-23 T 23-04-2016 IPR012156 Cold shock, CspA GO:0003676 RR42_RS17115 ca9d8b73b6fc6f142b64bafa9870d878 68 PANTHER PTHR11544 1 65 3.7E-36 T 23-04-2016 RR42_RS17115 ca9d8b73b6fc6f142b64bafa9870d878 68 SUPERFAMILY SSF50249 1 65 2.36E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS16075 d9efbeca6aa7332dab6a7a43ad8c7df0 507 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 507 206.405 T 23-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 RR42_RS16075 d9efbeca6aa7332dab6a7a43ad8c7df0 507 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 21 499 1.7E-141 T 23-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 RR42_RS16075 d9efbeca6aa7332dab6a7a43ad8c7df0 507 Gene3D G3DSA:3.40.50.300 20 252 2.8E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS16075 d9efbeca6aa7332dab6a7a43ad8c7df0 507 SUPERFAMILY SSF52540 20 253 3.64E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS16075 d9efbeca6aa7332dab6a7a43ad8c7df0 507 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 21 241 5.0E-30 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RR42_RS16075 d9efbeca6aa7332dab6a7a43ad8c7df0 507 SUPERFAMILY SSF52317 268 466 5.03E-37 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RR42_RS16075 d9efbeca6aa7332dab6a7a43ad8c7df0 507 PANTHER PTHR21343:SF1 1 504 1.0E-219 T 23-04-2016 RR42_RS16075 d9efbeca6aa7332dab6a7a43ad8c7df0 507 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 267 457 4.6E-55 T 23-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 RR42_RS16075 d9efbeca6aa7332dab6a7a43ad8c7df0 507 PANTHER PTHR21343 1 504 1.0E-219 T 23-04-2016 RR42_RS16075 d9efbeca6aa7332dab6a7a43ad8c7df0 507 Gene3D G3DSA:3.40.50.880 267 469 1.9E-27 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RR42_RS20830 edd1fd99c6febcae1ca217126d4e8a90 556 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 543 25.22 T 23-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 RR42_RS20830 edd1fd99c6febcae1ca217126d4e8a90 556 PRINTS PR01900 YidC translocation/secretion protein signature 496 520 3.1E-25 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RR42_RS20830 edd1fd99c6febcae1ca217126d4e8a90 556 PRINTS PR01900 YidC translocation/secretion protein signature 348 364 3.1E-25 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RR42_RS20830 edd1fd99c6febcae1ca217126d4e8a90 556 PRINTS PR01900 YidC translocation/secretion protein signature 477 492 3.1E-25 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RR42_RS20830 edd1fd99c6febcae1ca217126d4e8a90 556 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 361 7.7E-115 T 23-04-2016 IPR028053 Membrane insertase YidC, N-terminal RR42_RS20830 edd1fd99c6febcae1ca217126d4e8a90 556 Pfam PF14849 YidC periplasmic domain 84 352 1.4E-85 T 23-04-2016 IPR028053 Membrane insertase YidC, N-terminal RR42_RS20830 edd1fd99c6febcae1ca217126d4e8a90 556 PANTHER PTHR12428 179 541 1.2E-107 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RR42_RS20830 edd1fd99c6febcae1ca217126d4e8a90 556 PRINTS PR00701 60kDa inner membrane protein signature 172 192 2.8E-73 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RR42_RS20830 edd1fd99c6febcae1ca217126d4e8a90 556 PRINTS PR00701 60kDa inner membrane protein signature 507 530 2.8E-73 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RR42_RS20830 edd1fd99c6febcae1ca217126d4e8a90 556 PRINTS PR00701 60kDa inner membrane protein signature 424 447 2.8E-73 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RR42_RS20830 edd1fd99c6febcae1ca217126d4e8a90 556 PRINTS PR00701 60kDa inner membrane protein signature 260 275 2.8E-73 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RR42_RS20830 edd1fd99c6febcae1ca217126d4e8a90 556 PRINTS PR00701 60kDa inner membrane protein signature 471 493 2.8E-73 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RR42_RS20830 edd1fd99c6febcae1ca217126d4e8a90 556 PRINTS PR00701 60kDa inner membrane protein signature 89 110 2.8E-73 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RR42_RS20830 edd1fd99c6febcae1ca217126d4e8a90 556 PRINTS PR00701 60kDa inner membrane protein signature 225 243 2.8E-73 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RR42_RS20830 edd1fd99c6febcae1ca217126d4e8a90 556 PRINTS PR00701 60kDa inner membrane protein signature 333 353 2.8E-73 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RR42_RS20830 edd1fd99c6febcae1ca217126d4e8a90 556 PRINTS PR00701 60kDa inner membrane protein signature 2 23 2.8E-73 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RR42_RS20830 edd1fd99c6febcae1ca217126d4e8a90 556 Pfam PF02096 60Kd inner membrane protein 363 541 3.0E-63 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RR42_RS20830 edd1fd99c6febcae1ca217126d4e8a90 556 PANTHER PTHR12428:SF14 179 541 1.2E-107 T 23-04-2016 RR42_RS20830 edd1fd99c6febcae1ca217126d4e8a90 556 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 362 541 1.1E-73 T 23-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal RR42_RS14160 36273797719df61e45b4c4ed1e5f274f 1050 SMART SM00316 37 118 6.6E-10 T 23-04-2016 IPR022967 RNA-binding domain, S1 RR42_RS14160 36273797719df61e45b4c4ed1e5f274f 1050 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 423 1.2E-159 T 23-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 RR42_RS14160 36273797719df61e45b4c4ed1e5f274f 1050 PANTHER PTHR30001 1 846 0.0 T 23-04-2016 RR42_RS14160 36273797719df61e45b4c4ed1e5f274f 1050 SUPERFAMILY SSF50249 39 124 8.04E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS14160 36273797719df61e45b4c4ed1e5f274f 1050 Gene3D G3DSA:2.40.50.140 31 124 1.0E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS14160 36273797719df61e45b4c4ed1e5f274f 1050 Hamap MF_00970 Ribonuclease E [rne]. 1 1030 35.452 T 23-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 RR42_RS14160 36273797719df61e45b4c4ed1e5f274f 1050 Pfam PF10150 Ribonuclease E/G family 120 389 7.9E-94 T 23-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 RR42_RS14160 36273797719df61e45b4c4ed1e5f274f 1050 PANTHER PTHR30001:SF1 1 846 0.0 T 23-04-2016 RR42_RS14160 36273797719df61e45b4c4ed1e5f274f 1050 Pfam PF00575 S1 RNA binding domain 36 117 1.4E-10 T 23-04-2016 IPR003029 S1 domain GO:0003676 RR42_RS12910 77d2c82c436779e9e218c1ed549ebd91 482 PANTHER PTHR10422:SF21 11 471 1.0E-287 T 23-04-2016 RR42_RS12910 77d2c82c436779e9e218c1ed549ebd91 482 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 17 446 3.0E-118 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS12910 77d2c82c436779e9e218c1ed549ebd91 482 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 12 474 2.0E-234 T 23-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS12910 77d2c82c436779e9e218c1ed549ebd91 482 PANTHER PTHR10422 11 471 1.0E-287 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS12910 77d2c82c436779e9e218c1ed549ebd91 482 SUPERFAMILY SSF81442 14 471 7.59E-125 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS12910 77d2c82c436779e9e218c1ed549ebd91 482 Gene3D G3DSA:1.20.210.10 17 470 6.5E-71 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS12910 77d2c82c436779e9e218c1ed549ebd91 482 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 207 262 - T 23-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS00635 ae9d653b8372e024e40a0c83017baabf 331 Gene3D G3DSA:3.20.20.70 63 324 7.0E-70 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS00635 ae9d653b8372e024e40a0c83017baabf 331 TIGRFAM TIGR00510 lipA: lipoyl synthase 43 325 1.9E-126 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RR42_RS00635 ae9d653b8372e024e40a0c83017baabf 331 Hamap MF_00206 Lipoyl synthase [lipA]. 46 331 150.368 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RR42_RS00635 ae9d653b8372e024e40a0c83017baabf 331 Pfam PF04055 Radical SAM superfamily 101 261 9.5E-13 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RR42_RS00635 ae9d653b8372e024e40a0c83017baabf 331 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 38 83 3.6E-7 T 23-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RR42_RS00635 ae9d653b8372e024e40a0c83017baabf 331 SUPERFAMILY SSF102114 62 328 1.11E-63 T 23-04-2016 RR42_RS00635 ae9d653b8372e024e40a0c83017baabf 331 PIRSF PIRSF005963 3 331 2.6E-126 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RR42_RS00635 ae9d653b8372e024e40a0c83017baabf 331 PANTHER PTHR10949 43 327 2.4E-160 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RR42_RS00635 ae9d653b8372e024e40a0c83017baabf 331 SMART SM00729 94 302 1.4E-15 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RR42_RS10760 fcab524356c1bdbef1afbd9b50b6d4fe 111 Gene3D G3DSA:1.10.260.40 4 61 1.6E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS10760 fcab524356c1bdbef1afbd9b50b6d4fe 111 SUPERFAMILY SSF47413 4 66 1.13E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS10760 fcab524356c1bdbef1afbd9b50b6d4fe 111 Pfam PF13560 Helix-turn-helix domain 5 61 4.9E-8 T 23-04-2016 RR42_RS12515 e633d294cb75e599fdcec72b37763b66 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 8 118 6.4E-20 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RR42_RS12515 e633d294cb75e599fdcec72b37763b66 126 PANTHER PTHR28259 1 123 5.1E-31 T 23-04-2016 RR42_RS12515 e633d294cb75e599fdcec72b37763b66 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 123 17.681 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RR42_RS12515 e633d294cb75e599fdcec72b37763b66 126 TIGRFAM TIGR00494 crcB: protein CrcB 8 120 4.4E-27 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RR42_RS13025 78affe65719451a3eeb5688253e25f1c 328 SUPERFAMILY SSF50974 12 321 1.27E-73 T 23-04-2016 IPR011045 Nitrous oxide reductase, N-terminal RR42_RS13025 78affe65719451a3eeb5688253e25f1c 328 PANTHER PTHR13833 57 235 1.9E-19 T 23-04-2016 RR42_RS13025 78affe65719451a3eeb5688253e25f1c 328 PANTHER PTHR13833 279 320 1.9E-19 T 23-04-2016 RR42_RS13025 78affe65719451a3eeb5688253e25f1c 328 Gene3D G3DSA:2.130.10.10 26 321 9.2E-53 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RR42_RS13025 78affe65719451a3eeb5688253e25f1c 328 Pfam PF10282 Lactonase, 7-bladed beta-propeller 102 299 3.6E-10 T 23-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 RR42_RS20165 48a5e5c0a4796e4f8cc9feca63c96240 291 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 277 290 - T 23-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site RR42_RS20165 48a5e5c0a4796e4f8cc9feca63c96240 291 Pfam PF00231 ATP synthase 4 290 7.2E-90 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RR42_RS20165 48a5e5c0a4796e4f8cc9feca63c96240 291 PANTHER PTHR11693 1 291 1.7E-119 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RR42_RS20165 48a5e5c0a4796e4f8cc9feca63c96240 291 Gene3D G3DSA:1.10.287.80 240 286 9.9E-29 T 23-04-2016 RR42_RS20165 48a5e5c0a4796e4f8cc9feca63c96240 291 PRINTS PR00126 ATP synthase gamma subunit signature 238 257 1.8E-36 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RR42_RS20165 48a5e5c0a4796e4f8cc9feca63c96240 291 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.8E-36 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RR42_RS20165 48a5e5c0a4796e4f8cc9feca63c96240 291 PRINTS PR00126 ATP synthase gamma subunit signature 269 290 1.8E-36 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RR42_RS20165 48a5e5c0a4796e4f8cc9feca63c96240 291 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.8E-36 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RR42_RS20165 48a5e5c0a4796e4f8cc9feca63c96240 291 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 291 35.967 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RR42_RS20165 48a5e5c0a4796e4f8cc9feca63c96240 291 Gene3D G3DSA:1.10.287.80 19 60 9.3E-42 T 23-04-2016 RR42_RS20165 48a5e5c0a4796e4f8cc9feca63c96240 291 Gene3D G3DSA:1.10.287.80 206 239 9.3E-42 T 23-04-2016 RR42_RS20165 48a5e5c0a4796e4f8cc9feca63c96240 291 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 291 1.4E-103 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RR42_RS20165 48a5e5c0a4796e4f8cc9feca63c96240 291 SUPERFAMILY SSF52943 2 291 9.68E-95 T 23-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain RR42_RS20165 48a5e5c0a4796e4f8cc9feca63c96240 291 Gene3D G3DSA:3.40.1380.10 64 191 4.6E-41 T 23-04-2016 RR42_RS03635 0b3ab6e5330ab03478a458a6ddf7f709 300 SUPERFAMILY SSF50494 19 219 2.7E-19 T 23-04-2016 IPR009003 Peptidase S1, PA clan RR42_RS03635 0b3ab6e5330ab03478a458a6ddf7f709 300 Pfam PF13365 Trypsin-like peptidase domain 26 191 4.0E-10 T 23-04-2016 RR42_RS03635 0b3ab6e5330ab03478a458a6ddf7f709 300 Gene3D G3DSA:2.40.10.10 3 103 8.2E-6 T 23-04-2016 RR42_RS03635 0b3ab6e5330ab03478a458a6ddf7f709 300 PRINTS PR00834 HtrA/DegQ protease family signature 170 187 4.9E-5 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS03635 0b3ab6e5330ab03478a458a6ddf7f709 300 PRINTS PR00834 HtrA/DegQ protease family signature 132 156 4.9E-5 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS03635 0b3ab6e5330ab03478a458a6ddf7f709 300 PRINTS PR00834 HtrA/DegQ protease family signature 37 49 4.9E-5 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RR42_RS03635 0b3ab6e5330ab03478a458a6ddf7f709 300 Gene3D G3DSA:2.40.10.10 104 216 2.2E-5 T 23-04-2016 RR42_RS11860 bf3397de4eb76f8712749503316c2d73 186 Hamap MF_00040 Ribosome-recycling factor [frr]. 4 186 27.219 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 RR42_RS11860 bf3397de4eb76f8712749503316c2d73 186 PANTHER PTHR20982 7 186 1.8E-79 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 RR42_RS11860 bf3397de4eb76f8712749503316c2d73 186 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 186 8.1E-70 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 RR42_RS11860 bf3397de4eb76f8712749503316c2d73 186 SUPERFAMILY SSF55194 6 185 7.2E-72 T 23-04-2016 IPR023584 Ribosome recycling factor domain RR42_RS11860 bf3397de4eb76f8712749503316c2d73 186 Pfam PF01765 Ribosome recycling factor 21 184 2.4E-64 T 23-04-2016 IPR023584 Ribosome recycling factor domain RR42_RS11860 bf3397de4eb76f8712749503316c2d73 186 Gene3D G3DSA:1.10.132.20 67 186 8.2E-46 T 23-04-2016 IPR023584 Ribosome recycling factor domain RR42_RS16380 b6f4b7ecfa431892cd42b7e96857e739 337 SUPERFAMILY SSF51735 1 321 9.74E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS16380 b6f4b7ecfa431892cd42b7e96857e739 337 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1 160 0.0031 T 23-04-2016 RR42_RS16380 b6f4b7ecfa431892cd42b7e96857e739 337 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 5.4E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16380 b6f4b7ecfa431892cd42b7e96857e739 337 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 5.4E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16380 b6f4b7ecfa431892cd42b7e96857e739 337 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 68 79 5.4E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16380 b6f4b7ecfa431892cd42b7e96857e739 337 Gene3D G3DSA:3.90.25.10 216 323 1.7E-7 T 23-04-2016 RR42_RS16380 b6f4b7ecfa431892cd42b7e96857e739 337 Gene3D G3DSA:3.40.50.720 1 215 6.0E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS16380 b6f4b7ecfa431892cd42b7e96857e739 337 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 239 1.8E-36 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RR42_RS16380 b6f4b7ecfa431892cd42b7e96857e739 337 PANTHER PTHR10366 2 320 8.9E-51 T 23-04-2016 RR42_RS02035 78a8295c6eb6c1c809abffba5cda7262 623 PANTHER PTHR23083:SF195 115 613 8.1E-39 T 23-04-2016 RR42_RS02035 78a8295c6eb6c1c809abffba5cda7262 623 Gene3D G3DSA:1.25.40.10 337 405 3.7E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS02035 78a8295c6eb6c1c809abffba5cda7262 623 Gene3D G3DSA:1.25.40.10 102 167 2.1E-21 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS02035 78a8295c6eb6c1c809abffba5cda7262 623 Gene3D G3DSA:1.25.40.10 204 336 2.1E-21 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS02035 78a8295c6eb6c1c809abffba5cda7262 623 PANTHER PTHR23083 115 613 8.1E-39 T 23-04-2016 RR42_RS02035 78a8295c6eb6c1c809abffba5cda7262 623 SMART SM00028 218 251 12.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RR42_RS02035 78a8295c6eb6c1c809abffba5cda7262 623 SMART SM00028 285 318 17.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RR42_RS02035 78a8295c6eb6c1c809abffba5cda7262 623 SMART SM00028 571 604 0.95 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RR42_RS02035 78a8295c6eb6c1c809abffba5cda7262 623 SMART SM00028 469 502 260.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RR42_RS02035 78a8295c6eb6c1c809abffba5cda7262 623 SMART SM00028 319 352 120.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RR42_RS02035 78a8295c6eb6c1c809abffba5cda7262 623 Pfam PF13432 Tetratricopeptide repeat 290 351 2.3E-7 T 23-04-2016 RR42_RS02035 78a8295c6eb6c1c809abffba5cda7262 623 Pfam PF13432 Tetratricopeptide repeat 473 538 2.0E-6 T 23-04-2016 RR42_RS02035 78a8295c6eb6c1c809abffba5cda7262 623 Pfam PF13432 Tetratricopeptide repeat 198 250 0.0033 T 23-04-2016 RR42_RS02035 78a8295c6eb6c1c809abffba5cda7262 623 Pfam PF13432 Tetratricopeptide repeat 544 603 0.004 T 23-04-2016 RR42_RS02035 78a8295c6eb6c1c809abffba5cda7262 623 SUPERFAMILY SSF48452 445 606 2.66E-21 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS02035 78a8295c6eb6c1c809abffba5cda7262 623 SUPERFAMILY SSF48452 126 252 1.75E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS02035 78a8295c6eb6c1c809abffba5cda7262 623 Gene3D G3DSA:1.25.40.10 406 605 3.7E-26 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS02035 78a8295c6eb6c1c809abffba5cda7262 623 SUPERFAMILY SSF48452 391 417 7.01E-17 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS02035 78a8295c6eb6c1c809abffba5cda7262 623 SUPERFAMILY SSF48452 217 355 7.01E-17 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS37545 6d86e184c429d52f3e8e8214bd810721 916 SUPERFAMILY SSF53933 806 912 4.82E-19 T 23-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 RR42_RS37545 6d86e184c429d52f3e8e8214bd810721 916 PRINTS PR00117 Barnase signature 846 864 1.5E-5 T 23-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 RR42_RS37545 6d86e184c429d52f3e8e8214bd810721 916 PRINTS PR00117 Barnase signature 867 886 1.5E-5 T 23-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 RR42_RS37545 6d86e184c429d52f3e8e8214bd810721 916 PRINTS PR00117 Barnase signature 807 824 1.5E-5 T 23-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 RR42_RS37545 6d86e184c429d52f3e8e8214bd810721 916 Pfam PF00545 ribonuclease 820 909 2.9E-15 T 23-04-2016 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 RR42_RS37545 6d86e184c429d52f3e8e8214bd810721 916 Gene3D G3DSA:3.10.450.30 803 912 1.1E-27 T 23-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 RR42_RS37545 6d86e184c429d52f3e8e8214bd810721 916 Pfam PF04830 Possible hemagglutinin (DUF637) 423 584 1.3E-16 T 23-04-2016 IPR006915 Domain of unknown function DUF637, haemagglutinin putative RR42_RS19895 df1b5bb6e2fd5d184dcfa92009720fc0 139 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 53 127 6.6E-18 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RR42_RS19895 df1b5bb6e2fd5d184dcfa92009720fc0 139 SUPERFAMILY SSF54534 52 128 5.36E-16 T 23-04-2016 RR42_RS19895 df1b5bb6e2fd5d184dcfa92009720fc0 139 Gene3D G3DSA:3.10.50.30 50 138 1.1E-25 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RR42_RS19895 df1b5bb6e2fd5d184dcfa92009720fc0 139 PANTHER PTHR30437:SF5 11 137 1.7E-33 T 23-04-2016 RR42_RS19895 df1b5bb6e2fd5d184dcfa92009720fc0 139 Pfam PF14760 Rnk N-terminus 9 47 3.0E-5 T 23-04-2016 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain RR42_RS19895 df1b5bb6e2fd5d184dcfa92009720fc0 139 PANTHER PTHR30437 11 137 1.7E-33 T 23-04-2016 RR42_RS19895 df1b5bb6e2fd5d184dcfa92009720fc0 139 Gene3D G3DSA:1.10.286.20 7 47 3.1E-4 T 23-04-2016 RR42_RS17135 b6ce5de243105a3c60c4554575930214 416 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 29 410 4.9E-112 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RR42_RS17135 b6ce5de243105a3c60c4554575930214 416 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 303 322 - T 23-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RR42_RS17135 b6ce5de243105a3c60c4554575930214 416 PANTHER PTHR11835:SF52 1 164 2.1E-234 T 23-04-2016 RR42_RS17135 b6ce5de243105a3c60c4554575930214 416 PANTHER PTHR11835:SF52 188 255 2.1E-234 T 23-04-2016 RR42_RS17135 b6ce5de243105a3c60c4554575930214 416 PANTHER PTHR11835:SF52 275 416 2.1E-234 T 23-04-2016 RR42_RS17135 b6ce5de243105a3c60c4554575930214 416 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 2 416 6.9E-222 T 23-04-2016 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 RR42_RS17135 b6ce5de243105a3c60c4554575930214 416 Gene3D G3DSA:3.40.718.10 11 416 1.9E-159 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RR42_RS17135 b6ce5de243105a3c60c4554575930214 416 PANTHER PTHR11835 1 164 2.1E-234 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RR42_RS17135 b6ce5de243105a3c60c4554575930214 416 PANTHER PTHR11835 188 255 2.1E-234 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RR42_RS17135 b6ce5de243105a3c60c4554575930214 416 PANTHER PTHR11835 275 416 2.1E-234 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RR42_RS17135 b6ce5de243105a3c60c4554575930214 416 SMART SM01329 28 412 2.8E-170 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RR42_RS17135 b6ce5de243105a3c60c4554575930214 416 SUPERFAMILY SSF53659 2 416 1.31E-143 T 23-04-2016 RR42_RS19560 294c08ef9f269724bfd9abd9b1e9a074 203 Pfam PF13761 Domain of unknown function (DUF4166) 28 182 2.0E-21 T 23-04-2016 IPR025311 Domain of unknown function DUF4166 RR42_RS05515 0b911bd7f348ee4a6cc206d8cabea149 160 PANTHER PTHR11995 11 156 2.3E-124 T 23-04-2016 RR42_RS05515 0b911bd7f348ee4a6cc206d8cabea149 160 SUPERFAMILY SSF56770 9 153 1.83E-67 T 23-04-2016 RR42_RS05515 0b911bd7f348ee4a6cc206d8cabea149 160 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 RR42_RS05515 0b911bd7f348ee4a6cc206d8cabea149 160 Gene3D G3DSA:3.40.50.700 21 149 1.6E-32 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 RR42_RS05515 0b911bd7f348ee4a6cc206d8cabea149 160 PANTHER PTHR11995:SF19 11 156 2.3E-124 T 23-04-2016 RR42_RS05515 0b911bd7f348ee4a6cc206d8cabea149 160 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 152 6.5E-78 T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 RR42_RS05515 0b911bd7f348ee4a6cc206d8cabea149 160 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 145 3.7E-22 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 RR42_RS05515 0b911bd7f348ee4a6cc206d8cabea149 160 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 42.163 T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 RR42_RS07935 55052782abf8f9bf70c036decfed467a 361 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 254 319 4.8E-19 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RR42_RS07935 55052782abf8f9bf70c036decfed467a 361 Gene3D G3DSA:3.40.50.300 23 282 1.6E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07935 55052782abf8f9bf70c036decfed467a 361 ProSitePatterns PS00211 ABC transporters family signature. 175 189 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS07935 55052782abf8f9bf70c036decfed467a 361 PANTHER PTHR24220 27 341 4.6E-140 T 23-04-2016 RR42_RS07935 55052782abf8f9bf70c036decfed467a 361 SMART SM00382 61 260 6.1E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS07935 55052782abf8f9bf70c036decfed467a 361 PANTHER PTHR24220:SF336 27 341 4.6E-140 T 23-04-2016 RR42_RS07935 55052782abf8f9bf70c036decfed467a 361 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 252 338 4.0E-28 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RR42_RS07935 55052782abf8f9bf70c036decfed467a 361 Pfam PF00005 ABC transporter 53 202 2.8E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS07935 55052782abf8f9bf70c036decfed467a 361 SUPERFAMILY SSF52540 29 274 8.76E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12195 37072d77b74230aa799274b252e7969a 222 Pfam PF01435 Peptidase family M48 54 217 2.0E-26 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RR42_RS12195 37072d77b74230aa799274b252e7969a 222 PANTHER PTHR22726:SF4 1 220 3.7E-101 T 23-04-2016 RR42_RS12195 37072d77b74230aa799274b252e7969a 222 Gene3D G3DSA:3.30.2010.10 43 118 1.8E-19 T 23-04-2016 RR42_RS12195 37072d77b74230aa799274b252e7969a 222 PANTHER PTHR22726 1 220 3.7E-101 T 23-04-2016 RR42_RS15580 1cf457b980df0dac9ee33c205076848d 393 SUPERFAMILY SSF53383 9 392 1.27E-101 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS15580 1cf457b980df0dac9ee33c205076848d 393 Gene3D G3DSA:3.40.640.10 53 273 4.9E-66 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS15580 1cf457b980df0dac9ee33c205076848d 393 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 23-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 RR42_RS15580 1cf457b980df0dac9ee33c205076848d 393 Pfam PF00155 Aminotransferase class I and II 36 388 1.8E-57 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RR42_RS15580 1cf457b980df0dac9ee33c205076848d 393 PANTHER PTHR11751 11 391 5.1E-136 T 23-04-2016 RR42_RS15580 1cf457b980df0dac9ee33c205076848d 393 Gene3D G3DSA:3.90.1150.10 274 392 1.3E-30 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS15580 1cf457b980df0dac9ee33c205076848d 393 PANTHER PTHR11751:SF401 11 391 5.1E-136 T 23-04-2016 RR42_RS05610 17d555ea13133f4545ad0c469ee0b6d9 159 PANTHER PTHR13078 15 154 5.2E-37 T 23-04-2016 RR42_RS05610 17d555ea13133f4545ad0c469ee0b6d9 159 Pfam PF01575 MaoC like domain 14 115 1.8E-25 T 23-04-2016 IPR002539 MaoC-like domain RR42_RS05610 17d555ea13133f4545ad0c469ee0b6d9 159 SUPERFAMILY SSF54637 7 155 1.98E-36 T 23-04-2016 IPR029069 HotDog domain RR42_RS05610 17d555ea13133f4545ad0c469ee0b6d9 159 Gene3D G3DSA:3.10.129.10 7 154 2.4E-36 T 23-04-2016 IPR029069 HotDog domain RR42_RS11380 3b110ac5c2fc99c72747a469bdeac87b 184 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 30 171 48.155 T 23-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 RR42_RS11380 3b110ac5c2fc99c72747a469bdeac87b 184 PANTHER PTHR11079 26 172 2.5E-45 T 23-04-2016 RR42_RS11380 3b110ac5c2fc99c72747a469bdeac87b 184 SUPERFAMILY SSF53927 20 175 3.01E-56 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RR42_RS11380 3b110ac5c2fc99c72747a469bdeac87b 184 Pfam PF14437 MafB19-like deaminase 26 168 1.4E-29 T 23-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 RR42_RS11380 3b110ac5c2fc99c72747a469bdeac87b 184 PANTHER PTHR11079:SF72 26 172 2.5E-45 T 23-04-2016 RR42_RS11380 3b110ac5c2fc99c72747a469bdeac87b 184 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 75 112 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RR42_RS11380 3b110ac5c2fc99c72747a469bdeac87b 184 Gene3D G3DSA:3.40.140.10 19 167 4.2E-59 T 23-04-2016 RR42_RS04995 8b3334eff78fbb4328ac9b2d0b1bbd51 101 Pfam PF00436 Single-strand binding protein family 7 93 4.5E-5 T 23-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 RR42_RS04995 8b3334eff78fbb4328ac9b2d0b1bbd51 101 SUPERFAMILY SSF50249 6 94 2.81E-7 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS04995 8b3334eff78fbb4328ac9b2d0b1bbd51 101 Gene3D G3DSA:2.40.50.140 6 93 7.8E-7 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS03935 3077cab7db5d1cd14330ea8a2f6e5237 455 TIGRFAM TIGR03173 pbuX: xanthine permease 26 435 1.1E-149 T 23-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 RR42_RS03935 3077cab7db5d1cd14330ea8a2f6e5237 455 PANTHER PTHR11119 14 436 5.9E-101 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RR42_RS03935 3077cab7db5d1cd14330ea8a2f6e5237 455 Pfam PF00860 Permease family 23 399 4.1E-96 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RR42_RS03935 3077cab7db5d1cd14330ea8a2f6e5237 455 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 23 433 5.4E-108 T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 RR42_RS10195 2586a683b9c9b4fb424461ca2ea1459d 271 PANTHER PTHR24421 25 261 1.5E-28 T 23-04-2016 RR42_RS10195 2586a683b9c9b4fb424461ca2ea1459d 271 Pfam PF07730 Histidine kinase 45 105 7.1E-8 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RR42_RS10195 2586a683b9c9b4fb424461ca2ea1459d 271 SUPERFAMILY SSF55874 125 246 1.03E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS10195 2586a683b9c9b4fb424461ca2ea1459d 271 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 155 245 1.6E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS10195 2586a683b9c9b4fb424461ca2ea1459d 271 PANTHER PTHR24421:SF1 25 261 1.5E-28 T 23-04-2016 RR42_RS10195 2586a683b9c9b4fb424461ca2ea1459d 271 SMART SM00387 150 248 5.6E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS10195 2586a683b9c9b4fb424461ca2ea1459d 271 Gene3D G3DSA:3.30.565.10 148 247 8.9E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS04385 91a2e7a57cedcdce754670bd3574d1e3 420 Gene3D G3DSA:3.30.9.10 135 189 1.0E-8 T 23-04-2016 RR42_RS04385 91a2e7a57cedcdce754670bd3574d1e3 420 Gene3D G3DSA:3.30.9.10 271 317 1.0E-8 T 23-04-2016 RR42_RS04385 91a2e7a57cedcdce754670bd3574d1e3 420 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 415 48.673 T 23-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 RR42_RS04385 91a2e7a57cedcdce754670bd3574d1e3 420 SUPERFAMILY SSF51905 107 271 9.58E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS04385 91a2e7a57cedcdce754670bd3574d1e3 420 SUPERFAMILY SSF51905 1 54 9.58E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS04385 91a2e7a57cedcdce754670bd3574d1e3 420 SUPERFAMILY SSF51905 364 415 9.58E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS04385 91a2e7a57cedcdce754670bd3574d1e3 420 Pfam PF01266 FAD dependent oxidoreductase 2 401 4.2E-60 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RR42_RS04385 91a2e7a57cedcdce754670bd3574d1e3 420 Gene3D G3DSA:3.50.50.60 1 55 5.1E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS04385 91a2e7a57cedcdce754670bd3574d1e3 420 Gene3D G3DSA:3.50.50.60 108 122 5.1E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS04385 91a2e7a57cedcdce754670bd3574d1e3 420 Gene3D G3DSA:3.50.50.60 190 270 5.1E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS04385 91a2e7a57cedcdce754670bd3574d1e3 420 Gene3D G3DSA:3.50.50.60 364 416 5.1E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS04385 91a2e7a57cedcdce754670bd3574d1e3 420 PANTHER PTHR13847 1 63 1.6E-87 T 23-04-2016 RR42_RS04385 91a2e7a57cedcdce754670bd3574d1e3 420 PANTHER PTHR13847 107 414 1.6E-87 T 23-04-2016 RR42_RS04385 91a2e7a57cedcdce754670bd3574d1e3 420 PANTHER PTHR13847:SF148 1 63 1.6E-87 T 23-04-2016 RR42_RS04385 91a2e7a57cedcdce754670bd3574d1e3 420 PANTHER PTHR13847:SF148 107 414 1.6E-87 T 23-04-2016 RR42_RS04385 91a2e7a57cedcdce754670bd3574d1e3 420 SUPERFAMILY SSF54373 271 364 6.28E-9 T 23-04-2016 RR42_RS18310 42e486e73d267a5a6123519384a71d94 267 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 267 34.405 T 23-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 RR42_RS18310 42e486e73d267a5a6123519384a71d94 267 Gene3D G3DSA:3.20.20.70 1 266 1.5E-103 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS18310 42e486e73d267a5a6123519384a71d94 267 PANTHER PTHR22854 1 267 1.0E-101 T 23-04-2016 RR42_RS18310 42e486e73d267a5a6123519384a71d94 267 PANTHER PTHR22854:SF2 1 267 1.0E-101 T 23-04-2016 RR42_RS18310 42e486e73d267a5a6123519384a71d94 267 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 262 7.2E-91 T 23-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 RR42_RS18310 42e486e73d267a5a6123519384a71d94 267 SUPERFAMILY SSF51366 1 266 1.65E-84 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RR42_RS18310 42e486e73d267a5a6123519384a71d94 267 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 61 79 - T 23-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 RR42_RS05410 7fad954b1cfeef7809c0bacd93ab6587 325 Gene3D G3DSA:3.40.50.1820 127 316 9.9E-31 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS05410 7fad954b1cfeef7809c0bacd93ab6587 325 SUPERFAMILY SSF53474 126 298 3.86E-33 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS05410 7fad954b1cfeef7809c0bacd93ab6587 325 Pfam PF12697 Alpha/beta hydrolase family 131 273 1.3E-7 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS05660 a9b288da1208a311508b890313119290 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 35.633 T 23-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RR42_RS05660 a9b288da1208a311508b890313119290 100 PANTHER PTHR33569:SF1 2 100 1.5E-45 T 23-04-2016 RR42_RS05660 a9b288da1208a311508b890313119290 100 PIRSF PIRSF001223 1 100 3.9E-52 T 23-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RR42_RS05660 a9b288da1208a311508b890313119290 100 Pfam PF00547 Urease, gamma subunit 1 99 2.2E-48 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RR42_RS05660 a9b288da1208a311508b890313119290 100 SUPERFAMILY SSF54111 1 99 4.58E-47 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RR42_RS05660 a9b288da1208a311508b890313119290 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 7.2E-53 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RR42_RS05660 a9b288da1208a311508b890313119290 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 2.0E-35 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RR42_RS05660 a9b288da1208a311508b890313119290 100 Gene3D G3DSA:3.30.280.10 1 99 1.7E-50 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RR42_RS05660 a9b288da1208a311508b890313119290 100 PANTHER PTHR33569 2 100 1.5E-45 T 23-04-2016 RR42_RS11090 5d98357d364795829f9bc9a1b23384c8 211 PANTHER PTHR11080 7 211 7.2E-69 T 23-04-2016 RR42_RS11090 5d98357d364795829f9bc9a1b23384c8 211 PANTHER PTHR11080:SF2 7 211 7.2E-69 T 23-04-2016 RR42_RS11090 5d98357d364795829f9bc9a1b23384c8 211 Pfam PF00857 Isochorismatase family 10 189 7.2E-32 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RR42_RS11090 5d98357d364795829f9bc9a1b23384c8 211 SUPERFAMILY SSF52499 10 210 1.7E-50 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RR42_RS11090 5d98357d364795829f9bc9a1b23384c8 211 Gene3D G3DSA:3.40.50.850 9 210 5.2E-68 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RR42_RS12380 813fdb9a51072a4900e7ff0c81b693fc 107 SMART SM00834 1 41 3.1E-15 T 23-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RR42_RS12380 813fdb9a51072a4900e7ff0c81b693fc 107 Pfam PF09723 Zinc ribbon domain 1 40 3.8E-13 T 23-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RR42_RS12380 813fdb9a51072a4900e7ff0c81b693fc 107 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 46 4.0E-16 T 23-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RR42_RS10210 33e49a8a9138bd5ae1ac2f968d61a00b 327 Pfam PF00107 Zinc-binding dehydrogenase 159 271 1.1E-10 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RR42_RS10210 33e49a8a9138bd5ae1ac2f968d61a00b 327 SUPERFAMILY SSF51735 116 285 9.05E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10210 33e49a8a9138bd5ae1ac2f968d61a00b 327 Gene3D G3DSA:3.90.180.10 15 131 8.1E-5 T 23-04-2016 IPR011032 GroES-like RR42_RS10210 33e49a8a9138bd5ae1ac2f968d61a00b 327 SMART SM00829 16 323 0.0026 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RR42_RS10210 33e49a8a9138bd5ae1ac2f968d61a00b 327 Gene3D G3DSA:3.40.50.720 132 288 1.8E-70 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10210 33e49a8a9138bd5ae1ac2f968d61a00b 327 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 325 2.2E-128 T 23-04-2016 IPR014188 Acrylyl-CoA reductase AcuI RR42_RS10210 33e49a8a9138bd5ae1ac2f968d61a00b 327 PANTHER PTHR11695 16 327 5.7E-141 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RR42_RS10210 33e49a8a9138bd5ae1ac2f968d61a00b 327 SUPERFAMILY SSF50129 2 146 8.96E-41 T 23-04-2016 IPR011032 GroES-like RR42_RS10210 33e49a8a9138bd5ae1ac2f968d61a00b 327 PANTHER PTHR11695:SF13 16 327 5.7E-141 T 23-04-2016 IPR014188 Acrylyl-CoA reductase AcuI RR42_RS01355 f93fe89f38e77e3fb376c074da3c7048 70 Pfam PF00364 Biotin-requiring enzyme 9 69 3.0E-15 T 23-04-2016 IPR000089 Biotin/lipoyl attachment RR42_RS01355 f93fe89f38e77e3fb376c074da3c7048 70 PANTHER PTHR18866 2 70 7.6E-12 T 23-04-2016 RR42_RS01355 f93fe89f38e77e3fb376c074da3c7048 70 PANTHER PTHR18866:SF102 2 70 7.6E-12 T 23-04-2016 RR42_RS01355 f93fe89f38e77e3fb376c074da3c7048 70 SUPERFAMILY SSF51230 3 69 7.07E-18 T 23-04-2016 IPR011053 Single hybrid motif RR42_RS01355 f93fe89f38e77e3fb376c074da3c7048 70 Gene3D G3DSA:2.40.50.100 2 69 3.2E-21 T 23-04-2016 RR42_RS17825 5e06d21385490aa66aab3237488b4b59 283 PANTHER PTHR30136:SF8 2 274 1.5E-61 T 23-04-2016 RR42_RS17825 5e06d21385490aa66aab3237488b4b59 283 Pfam PF01614 Bacterial transcriptional regulator 144 245 2.6E-8 T 23-04-2016 IPR014757 Transcription regulator IclR, C-terminal RR42_RS17825 5e06d21385490aa66aab3237488b4b59 283 Gene3D G3DSA:1.10.10.10 24 100 6.4E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS17825 5e06d21385490aa66aab3237488b4b59 283 Gene3D G3DSA:3.30.450.40 101 274 4.8E-38 T 23-04-2016 IPR029016 GAF domain-like RR42_RS17825 5e06d21385490aa66aab3237488b4b59 283 SUPERFAMILY SSF55781 93 274 1.77E-30 T 23-04-2016 IPR029016 GAF domain-like RR42_RS17825 5e06d21385490aa66aab3237488b4b59 283 Pfam PF09339 IclR helix-turn-helix domain 32 77 2.8E-9 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RR42_RS17825 5e06d21385490aa66aab3237488b4b59 283 PANTHER PTHR30136 2 274 1.5E-61 T 23-04-2016 RR42_RS17825 5e06d21385490aa66aab3237488b4b59 283 SMART SM00346 26 116 1.3E-8 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RR42_RS17825 5e06d21385490aa66aab3237488b4b59 283 SUPERFAMILY SSF46785 26 100 1.39E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS20095 592e40c9666482235ee5be325fc12825 159 SUPERFAMILY SSF82784 1 152 2.49E-46 T 23-04-2016 IPR003718 OsmC/Ohr family RR42_RS20095 592e40c9666482235ee5be325fc12825 159 Pfam PF02566 OsmC-like protein 52 151 2.4E-14 T 23-04-2016 IPR003718 OsmC/Ohr family RR42_RS20095 592e40c9666482235ee5be325fc12825 159 Gene3D G3DSA:3.30.300.20 1 153 3.0E-57 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta RR42_RS04620 b62eba613aa87271e57f7067307fec12 84 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 1.3E-26 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS04620 b62eba613aa87271e57f7067307fec12 84 Gene3D G3DSA:3.30.1320.10 1 78 5.4E-32 T 23-04-2016 IPR023803 Ribosomal protein S16 domain RR42_RS04620 b62eba613aa87271e57f7067307fec12 84 SUPERFAMILY SSF54565 1 77 6.15E-28 T 23-04-2016 IPR023803 Ribosomal protein S16 domain RR42_RS04620 b62eba613aa87271e57f7067307fec12 84 PANTHER PTHR12919 1 76 1.3E-37 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS04620 b62eba613aa87271e57f7067307fec12 84 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.03 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS04620 b62eba613aa87271e57f7067307fec12 84 Pfam PF00886 Ribosomal protein S16 8 68 1.0E-23 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19195 0c064525b5a316001de9f55ac33fd05e 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 44.141 T 23-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19195 0c064525b5a316001de9f55ac33fd05e 180 SUPERFAMILY SSF55282 4 180 2.83E-76 T 23-04-2016 IPR022803 Ribosomal protein L5 domain RR42_RS19195 0c064525b5a316001de9f55ac33fd05e 180 ProSitePatterns PS00358 Ribosomal protein L5 signature. 58 74 - T 23-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19195 0c064525b5a316001de9f55ac33fd05e 180 PIRSF PIRSF002161 1 180 5.1E-62 T 23-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 RR42_RS19195 0c064525b5a316001de9f55ac33fd05e 180 Pfam PF00673 ribosomal L5P family C-terminus 85 178 2.4E-39 T 23-04-2016 IPR031309 Ribosomal protein L5, C-terminal RR42_RS19195 0c064525b5a316001de9f55ac33fd05e 180 Gene3D G3DSA:3.30.1440.10 3 180 2.9E-75 T 23-04-2016 IPR022803 Ribosomal protein L5 domain RR42_RS19195 0c064525b5a316001de9f55ac33fd05e 180 Pfam PF00281 Ribosomal protein L5 25 81 1.1E-26 T 23-04-2016 IPR031310 Ribosomal protein L5, N-terminal RR42_RS19195 0c064525b5a316001de9f55ac33fd05e 180 PANTHER PTHR11994 1 179 6.2E-91 T 23-04-2016 RR42_RS20835 6f9306125323a57f66e41766dc5ccd08 130 Gene3D G3DSA:3.30.230.10 4 77 2.2E-17 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RR42_RS20835 6f9306125323a57f66e41766dc5ccd08 130 Pfam PF00825 Ribonuclease P 4 77 3.1E-16 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RR42_RS20835 6f9306125323a57f66e41766dc5ccd08 130 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 33 47 - T 23-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 RR42_RS20835 6f9306125323a57f66e41766dc5ccd08 130 SUPERFAMILY SSF54211 4 77 3.29E-15 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RR42_RS20835 6f9306125323a57f66e41766dc5ccd08 130 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 1 63 7.0E-22 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RR42_RS20835 6f9306125323a57f66e41766dc5ccd08 130 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 4 67 3.0E-12 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RR42_RS18760 34878bc48f701d1384adf80f79c72bcc 624 PANTHER PTHR11070 31 305 9.1E-21 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RR42_RS18760 34878bc48f701d1384adf80f79c72bcc 624 Gene3D G3DSA:3.40.50.300 23 241 8.0E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18760 34878bc48f701d1384adf80f79c72bcc 624 Gene3D G3DSA:3.40.50.300 507 594 3.1E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18760 34878bc48f701d1384adf80f79c72bcc 624 Pfam PF00580 UvrD/REP helicase N-terminal domain 152 241 9.6E-9 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RR42_RS18760 34878bc48f701d1384adf80f79c72bcc 624 Pfam PF13245 Part of AAA domain 29 95 2.4E-7 T 23-04-2016 RR42_RS18760 34878bc48f701d1384adf80f79c72bcc 624 SUPERFAMILY SSF52540 25 484 8.07E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18760 34878bc48f701d1384adf80f79c72bcc 624 SUPERFAMILY SSF52540 514 540 8.07E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18760 34878bc48f701d1384adf80f79c72bcc 624 SUPERFAMILY SSF52540 572 598 8.07E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07340 ddd2f8fe545ea958b77c70365443ef67 704 Gene3D G3DSA:1.10.1370.10 156 368 2.2E-137 T 23-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RR42_RS07340 ddd2f8fe545ea958b77c70365443ef67 704 Gene3D G3DSA:1.10.1370.10 523 702 2.2E-137 T 23-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RR42_RS07340 ddd2f8fe545ea958b77c70365443ef67 704 Pfam PF01432 Peptidase family M3 237 698 5.6E-144 T 23-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 RR42_RS07340 ddd2f8fe545ea958b77c70365443ef67 704 Gene3D G3DSA:1.20.1050.40 26 153 2.6E-16 T 23-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal RR42_RS07340 ddd2f8fe545ea958b77c70365443ef67 704 SUPERFAMILY SSF55486 17 700 7.2E-193 T 23-04-2016 RR42_RS07340 ddd2f8fe545ea958b77c70365443ef67 704 Gene3D G3DSA:3.40.390.10 378 522 1.5E-55 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RR42_RS07340 ddd2f8fe545ea958b77c70365443ef67 704 PANTHER PTHR11804 17 701 1.2E-276 T 23-04-2016 RR42_RS07340 ddd2f8fe545ea958b77c70365443ef67 704 PANTHER PTHR11804:SF8 17 701 1.2E-276 T 23-04-2016 RR42_RS20245 b4032fb8be29a7bde4abb2b295e646b3 350 PANTHER PTHR11795 120 350 1.3E-136 T 23-04-2016 RR42_RS20245 b4032fb8be29a7bde4abb2b295e646b3 350 PANTHER PTHR11795 1 57 1.3E-136 T 23-04-2016 RR42_RS20245 b4032fb8be29a7bde4abb2b295e646b3 350 Pfam PF02653 Branched-chain amino acid transport system / permease component 98 335 9.6E-15 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RR42_RS20245 b4032fb8be29a7bde4abb2b295e646b3 350 PANTHER PTHR11795:SF402 120 350 1.3E-136 T 23-04-2016 RR42_RS20245 b4032fb8be29a7bde4abb2b295e646b3 350 PANTHER PTHR11795:SF402 1 57 1.3E-136 T 23-04-2016 RR42_RS19035 6656b9d1028bc87e9aac9f945db49712 361 Gene3D G3DSA:3.30.420.40 13 109 1.7E-7 T 23-04-2016 RR42_RS19035 6656b9d1028bc87e9aac9f945db49712 361 SUPERFAMILY SSF53067 201 359 2.71E-11 T 23-04-2016 RR42_RS19035 6656b9d1028bc87e9aac9f945db49712 361 PANTHER PTHR32432:SF3 2 361 1.8E-31 T 23-04-2016 RR42_RS19035 6656b9d1028bc87e9aac9f945db49712 361 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 12 360 1.7E-64 T 23-04-2016 IPR005883 Type IV pilus assembly protein PilM RR42_RS19035 6656b9d1028bc87e9aac9f945db49712 361 PIRSF PIRSF019169 2 361 1.2E-90 T 23-04-2016 IPR005883 Type IV pilus assembly protein PilM RR42_RS19035 6656b9d1028bc87e9aac9f945db49712 361 SMART SM00842 14 181 5.7E-5 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 RR42_RS19035 6656b9d1028bc87e9aac9f945db49712 361 Pfam PF11104 Type IV pilus assembly protein PilM; 16 359 7.5E-103 T 23-04-2016 IPR005883 Type IV pilus assembly protein PilM RR42_RS19035 6656b9d1028bc87e9aac9f945db49712 361 SUPERFAMILY SSF53067 14 181 3.06E-15 T 23-04-2016 RR42_RS19035 6656b9d1028bc87e9aac9f945db49712 361 Gene3D G3DSA:3.30.420.40 202 326 9.0E-10 T 23-04-2016 RR42_RS19035 6656b9d1028bc87e9aac9f945db49712 361 PANTHER PTHR32432 2 361 1.8E-31 T 23-04-2016 RR42_RS04815 6d383958d72eb2285afbb349e1590f3f 314 PANTHER PTHR30177:SF9 21 314 2.0E-95 T 23-04-2016 RR42_RS04815 6d383958d72eb2285afbb349e1590f3f 314 SUPERFAMILY SSF53850 41 313 4.34E-64 T 23-04-2016 RR42_RS04815 6d383958d72eb2285afbb349e1590f3f 314 Gene3D G3DSA:3.40.190.120 143 251 4.1E-30 T 23-04-2016 RR42_RS04815 6d383958d72eb2285afbb349e1590f3f 314 Gene3D G3DSA:3.40.190.10 40 142 1.3E-54 T 23-04-2016 RR42_RS04815 6d383958d72eb2285afbb349e1590f3f 314 Gene3D G3DSA:3.40.190.10 258 314 1.3E-54 T 23-04-2016 RR42_RS04815 6d383958d72eb2285afbb349e1590f3f 314 PANTHER PTHR30177 21 314 2.0E-95 T 23-04-2016 RR42_RS04815 6d383958d72eb2285afbb349e1590f3f 314 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 41 309 2.7E-62 T 23-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 RR42_RS19090 965bc33d5f6bdb58a3a832405fc9618c 219 SUPERFAMILY SSF46626 131 217 1.45E-22 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS19090 965bc33d5f6bdb58a3a832405fc9618c 219 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 35 117 3.7E-7 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS19090 965bc33d5f6bdb58a3a832405fc9618c 219 Gene3D G3DSA:1.10.760.10 58 120 4.4E-26 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS19090 965bc33d5f6bdb58a3a832405fc9618c 219 Gene3D G3DSA:1.10.760.10 145 217 2.3E-27 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS19090 965bc33d5f6bdb58a3a832405fc9618c 219 SUPERFAMILY SSF46626 33 119 2.7E-21 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS19090 965bc33d5f6bdb58a3a832405fc9618c 219 Pfam PF00034 Cytochrome c 134 216 2.8E-8 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS19090 965bc33d5f6bdb58a3a832405fc9618c 219 PIRSF PIRSF000005 1 219 2.2E-64 T 23-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 RR42_RS19090 965bc33d5f6bdb58a3a832405fc9618c 219 PANTHER PTHR33751:SF3 52 219 7.2E-49 T 23-04-2016 RR42_RS19090 965bc33d5f6bdb58a3a832405fc9618c 219 PANTHER PTHR33751 52 219 7.2E-49 T 23-04-2016 RR42_RS19090 965bc33d5f6bdb58a3a832405fc9618c 219 Gene3D G3DSA:1.10.760.10 20 57 2.1E-5 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS07860 8e63d6e9324410e7fe156a7b28b3764e 193 Gene3D G3DSA:3.40.630.30 6 158 1.2E-20 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS07860 8e63d6e9324410e7fe156a7b28b3764e 193 PANTHER PTHR23091 3 84 6.5E-12 T 23-04-2016 RR42_RS07860 8e63d6e9324410e7fe156a7b28b3764e 193 PANTHER PTHR23091 100 182 6.5E-12 T 23-04-2016 RR42_RS07860 8e63d6e9324410e7fe156a7b28b3764e 193 Pfam PF00583 Acetyltransferase (GNAT) family 96 156 6.4E-8 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RR42_RS07860 8e63d6e9324410e7fe156a7b28b3764e 193 SUPERFAMILY SSF55729 5 159 4.63E-19 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS37425 96e104bdb0d0e6d2cc9f0a6d5526ba6e 92 Gene3D G3DSA:3.40.50.2020 13 88 1.8E-16 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS37425 96e104bdb0d0e6d2cc9f0a6d5526ba6e 92 SUPERFAMILY SSF53271 14 90 1.22E-12 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS18865 7163f6bedda9d90a2e7595f6f4250656 118 Gene3D G3DSA:3.30.428.10 2 114 2.4E-40 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 RR42_RS18865 7163f6bedda9d90a2e7595f6f4250656 118 Pfam PF01230 HIT domain 16 108 1.3E-24 T 23-04-2016 IPR001310 Histidine triad (HIT) protein RR42_RS18865 7163f6bedda9d90a2e7595f6f4250656 118 SUPERFAMILY SSF54197 5 114 9.59E-39 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 RR42_RS18865 7163f6bedda9d90a2e7595f6f4250656 118 ProSitePatterns PS00892 HIT domain signature. 89 107 - T 23-04-2016 IPR019808 Histidine triad, conserved site RR42_RS18865 7163f6bedda9d90a2e7595f6f4250656 118 PANTHER PTHR23089 6 113 2.3E-42 T 23-04-2016 IPR001310 Histidine triad (HIT) protein RR42_RS18865 7163f6bedda9d90a2e7595f6f4250656 118 PRINTS PR00332 Histidine triad family signature 29 47 3.2E-19 T 23-04-2016 IPR001310 Histidine triad (HIT) protein RR42_RS18865 7163f6bedda9d90a2e7595f6f4250656 118 PRINTS PR00332 Histidine triad family signature 96 106 3.2E-19 T 23-04-2016 IPR001310 Histidine triad (HIT) protein RR42_RS18865 7163f6bedda9d90a2e7595f6f4250656 118 PRINTS PR00332 Histidine triad family signature 8 24 3.2E-19 T 23-04-2016 IPR001310 Histidine triad (HIT) protein RR42_RS05240 5e4c8387a47c3035ec400cdadc44c6ef 78 PANTHER PTHR30537:SF5 1 72 2.3E-16 T 23-04-2016 RR42_RS05240 5e4c8387a47c3035ec400cdadc44c6ef 78 Gene3D G3DSA:3.40.190.10 2 43 7.2E-7 T 23-04-2016 RR42_RS05240 5e4c8387a47c3035ec400cdadc44c6ef 78 PANTHER PTHR30537 1 72 2.3E-16 T 23-04-2016 RR42_RS05240 5e4c8387a47c3035ec400cdadc44c6ef 78 Pfam PF03466 LysR substrate binding domain 2 73 9.8E-13 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS05240 5e4c8387a47c3035ec400cdadc44c6ef 78 SUPERFAMILY SSF53850 2 74 1.45E-13 T 23-04-2016 RR42_RS11000 4e6dda09626786aea2070eb620e37318 321 Gene3D G3DSA:3.40.50.1820 5 319 5.5E-89 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS11000 4e6dda09626786aea2070eb620e37318 321 PANTHER PTHR23024 54 316 1.0E-79 T 23-04-2016 RR42_RS11000 4e6dda09626786aea2070eb620e37318 321 Pfam PF07859 alpha/beta hydrolase fold 86 295 7.8E-73 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RR42_RS11000 4e6dda09626786aea2070eb620e37318 321 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 86 102 - T 23-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 RR42_RS11000 4e6dda09626786aea2070eb620e37318 321 PANTHER PTHR23024:SF24 54 316 1.0E-79 T 23-04-2016 RR42_RS11000 4e6dda09626786aea2070eb620e37318 321 SUPERFAMILY SSF53474 32 319 2.38E-67 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS12340 fb176273e4e6f1c7128fc22433639094 333 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 60 329 3.9E-63 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS12340 fb176273e4e6f1c7128fc22433639094 333 PANTHER PTHR30349 24 330 3.0E-62 T 23-04-2016 RR42_RS12340 fb176273e4e6f1c7128fc22433639094 333 PIRSF PIRSF017082 4 332 3.9E-64 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS12340 fb176273e4e6f1c7128fc22433639094 333 Gene3D G3DSA:3.40.190.10 142 236 7.0E-5 T 23-04-2016 RR42_RS12340 fb176273e4e6f1c7128fc22433639094 333 PANTHER PTHR30349:SF32 24 330 3.0E-62 T 23-04-2016 RR42_RS12340 fb176273e4e6f1c7128fc22433639094 333 SUPERFAMILY SSF53850 44 286 2.48E-9 T 23-04-2016 RR42_RS17610 ff41ea01ece516506fe7ce3132f8bb82 774 Gene3D G3DSA:3.40.50.10380 27 176 1.7E-50 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RR42_RS17610 ff41ea01ece516506fe7ce3132f8bb82 774 Pfam PF03949 Malic enzyme, NAD binding domain 181 376 6.3E-21 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RR42_RS17610 ff41ea01ece516506fe7ce3132f8bb82 774 Pfam PF12434 Malate dehydrogenase enzyme 1 32 1.3E-16 T 23-04-2016 IPR032683 Malate dehydrogenase enzyme, N-terminal RR42_RS17610 ff41ea01ece516506fe7ce3132f8bb82 774 SUPERFAMILY SSF53223 26 177 1.22E-52 T 23-04-2016 RR42_RS17610 ff41ea01ece516506fe7ce3132f8bb82 774 PANTHER PTHR23406 48 463 7.8E-162 T 23-04-2016 RR42_RS17610 ff41ea01ece516506fe7ce3132f8bb82 774 SMART SM01274 34 167 1.3E-80 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RR42_RS17610 ff41ea01ece516506fe7ce3132f8bb82 774 SUPERFAMILY SSF51735 179 454 2.87E-83 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS17610 ff41ea01ece516506fe7ce3132f8bb82 774 PIRSF PIRSF036684 14 774 0.0 T 23-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 RR42_RS17610 ff41ea01ece516506fe7ce3132f8bb82 774 Gene3D G3DSA:3.40.50.720 177 459 4.6E-87 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS17610 ff41ea01ece516506fe7ce3132f8bb82 774 SMART SM00919 179 416 5.1E-135 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RR42_RS17610 ff41ea01ece516506fe7ce3132f8bb82 774 SUPERFAMILY SSF53659 445 770 1.4E-87 T 23-04-2016 RR42_RS17610 ff41ea01ece516506fe7ce3132f8bb82 774 Pfam PF01515 Phosphate acetyl/butaryl transferase 447 765 8.0E-93 T 23-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 RR42_RS17610 ff41ea01ece516506fe7ce3132f8bb82 774 Pfam PF00390 Malic enzyme, N-terminal domain 35 167 6.4E-27 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RR42_RS17610 ff41ea01ece516506fe7ce3132f8bb82 774 Gene3D G3DSA:3.40.50.10750 594 742 2.3E-50 T 23-04-2016 RR42_RS12015 eaa3c6c252fee2ecf3a5bc784f6731c0 161 Gene3D G3DSA:1.20.1550.10 4 158 4.6E-47 T 23-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain RR42_RS12015 eaa3c6c252fee2ecf3a5bc784f6731c0 161 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 1 159 19.354 T 23-04-2016 IPR022920 Disulphide bond formation protein DsbB RR42_RS12015 eaa3c6c252fee2ecf3a5bc784f6731c0 161 Pfam PF02600 Disulfide bond formation protein DsbB 6 150 5.3E-39 T 23-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 RR42_RS12015 eaa3c6c252fee2ecf3a5bc784f6731c0 161 PANTHER PTHR36570 1 156 1.5E-19 T 23-04-2016 RR42_RS12015 eaa3c6c252fee2ecf3a5bc784f6731c0 161 SUPERFAMILY SSF158442 8 151 2.09E-36 T 23-04-2016 RR42_RS12885 fe1d0e030b68c78dd6868ad90151f23d 72 Pfam PF05751 FixH 10 44 5.0E-6 T 23-04-2016 IPR008620 Nitrogen fixation protein FixH RR42_RS19595 67f0a1208d75d129fc25383532f4f9a2 373 SUPERFAMILY SSF103473 2 365 2.75E-29 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS19595 67f0a1208d75d129fc25383532f4f9a2 373 PANTHER PTHR23514 1 365 1.1E-93 T 23-04-2016 RR42_RS19595 67f0a1208d75d129fc25383532f4f9a2 373 Gene3D G3DSA:1.20.1250.20 189 364 1.7E-6 T 23-04-2016 RR42_RS19595 67f0a1208d75d129fc25383532f4f9a2 373 Gene3D G3DSA:1.20.1250.20 2 167 4.9E-10 T 23-04-2016 RR42_RS19595 67f0a1208d75d129fc25383532f4f9a2 373 PANTHER PTHR23514:SF13 1 365 1.1E-93 T 23-04-2016 RR42_RS19595 67f0a1208d75d129fc25383532f4f9a2 373 Pfam PF07690 Major Facilitator Superfamily 3 307 2.7E-15 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS04160 9b9b2335b54e0c15eb9e76ed2d42f775 414 Pfam PF09594 Protein of unknown function (DUF2029) 103 331 4.4E-33 T 23-04-2016 IPR018584 Glycosyltransferase family 87 GO:0016758 RR42_RS04200 1ad11affbc208db042010a9bc540d187 389 PANTHER PTHR22726:SF7 333 354 4.3E-43 T 23-04-2016 RR42_RS04200 1ad11affbc208db042010a9bc540d187 389 PANTHER PTHR22726:SF7 370 387 4.3E-43 T 23-04-2016 RR42_RS04200 1ad11affbc208db042010a9bc540d187 389 PANTHER PTHR22726:SF7 17 314 4.3E-43 T 23-04-2016 RR42_RS04200 1ad11affbc208db042010a9bc540d187 389 PANTHER PTHR22726 333 354 4.3E-43 T 23-04-2016 RR42_RS04200 1ad11affbc208db042010a9bc540d187 389 PANTHER PTHR22726 370 387 4.3E-43 T 23-04-2016 RR42_RS04200 1ad11affbc208db042010a9bc540d187 389 PANTHER PTHR22726 17 314 4.3E-43 T 23-04-2016 RR42_RS04200 1ad11affbc208db042010a9bc540d187 389 Gene3D G3DSA:3.30.2010.10 201 248 2.8E-8 T 23-04-2016 RR42_RS04200 1ad11affbc208db042010a9bc540d187 389 Pfam PF01435 Peptidase family M48 168 386 6.0E-22 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RR42_RS11350 80e8c7bcfc425875bb184bbb12bc2008 297 Gene3D G3DSA:3.60.130.10 12 297 1.5E-86 T 23-04-2016 RR42_RS11350 80e8c7bcfc425875bb184bbb12bc2008 297 SUPERFAMILY SSF51197 16 297 1.28E-86 T 23-04-2016 RR42_RS11350 80e8c7bcfc425875bb184bbb12bc2008 297 PANTHER PTHR30468 4 297 5.9E-74 T 23-04-2016 RR42_RS11350 80e8c7bcfc425875bb184bbb12bc2008 297 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 18 290 2.2E-55 T 23-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 RR42_RS11290 4c14cdfd74c03e9c226f757b56e18bb0 200 PANTHER PTHR30328 8 187 4.0E-25 T 23-04-2016 RR42_RS11290 4c14cdfd74c03e9c226f757b56e18bb0 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 58 7.1E-13 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS11290 4c14cdfd74c03e9c226f757b56e18bb0 200 Gene3D G3DSA:1.10.357.10 5 187 1.4E-32 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS11290 4c14cdfd74c03e9c226f757b56e18bb0 200 SUPERFAMILY SSF48498 79 187 8.4E-21 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RR42_RS11290 4c14cdfd74c03e9c226f757b56e18bb0 200 Pfam PF16925 Bacterial transcriptional repressor C-terminal 91 186 7.7E-9 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RR42_RS11290 4c14cdfd74c03e9c226f757b56e18bb0 200 PANTHER PTHR30328:SF7 8 187 4.0E-25 T 23-04-2016 RR42_RS11290 4c14cdfd74c03e9c226f757b56e18bb0 200 SUPERFAMILY SSF46689 6 73 7.18E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS12960 da98000e0f200af1aec675ef7e5cd891 282 Gene3D G3DSA:1.10.3720.10 4 271 9.6E-53 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS12960 da98000e0f200af1aec675ef7e5cd891 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 277 1.6E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS12960 da98000e0f200af1aec675ef7e5cd891 282 PANTHER PTHR32243:SF31 1 280 3.6E-128 T 23-04-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 RR42_RS12960 da98000e0f200af1aec675ef7e5cd891 282 PANTHER PTHR32243 1 280 3.6E-128 T 23-04-2016 RR42_RS12960 da98000e0f200af1aec675ef7e5cd891 282 SUPERFAMILY SSF161098 4 278 1.7E-59 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS19345 94ddaaf4aa178248280921eab793e0ea 193 SMART SM00739 139 166 1.4E-5 T 23-04-2016 IPR005824 KOW RR42_RS19345 94ddaaf4aa178248280921eab793e0ea 193 SUPERFAMILY SSF50104 137 193 1.1E-19 T 23-04-2016 IPR008991 Translation protein SH3-like domain RR42_RS19345 94ddaaf4aa178248280921eab793e0ea 193 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 21 193 1.4E-69 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RR42_RS19345 94ddaaf4aa178248280921eab793e0ea 193 SUPERFAMILY SSF82679 18 129 6.67E-39 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 RR42_RS19345 94ddaaf4aa178248280921eab793e0ea 193 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 18 193 25.463 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RR42_RS19345 94ddaaf4aa178248280921eab793e0ea 193 PANTHER PTHR30265 16 193 8.8E-81 T 23-04-2016 RR42_RS19345 94ddaaf4aa178248280921eab793e0ea 193 ProSitePatterns PS01014 Transcription termination factor nusG signature. 176 185 - T 23-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site RR42_RS19345 94ddaaf4aa178248280921eab793e0ea 193 SMART SM00738 18 127 8.1E-48 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 RR42_RS19345 94ddaaf4aa178248280921eab793e0ea 193 Pfam PF02357 Transcription termination factor nusG 19 124 9.6E-27 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 RR42_RS19345 94ddaaf4aa178248280921eab793e0ea 193 Pfam PF00467 KOW motif 142 175 1.8E-6 T 23-04-2016 IPR005824 KOW RR42_RS19345 94ddaaf4aa178248280921eab793e0ea 193 PRINTS PR00338 Transcription termination factor NUSG signature 169 185 1.3E-19 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RR42_RS19345 94ddaaf4aa178248280921eab793e0ea 193 PRINTS PR00338 Transcription termination factor NUSG signature 73 85 1.3E-19 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RR42_RS19345 94ddaaf4aa178248280921eab793e0ea 193 PRINTS PR00338 Transcription termination factor NUSG signature 151 166 1.3E-19 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RR42_RS19345 94ddaaf4aa178248280921eab793e0ea 193 Gene3D G3DSA:3.30.70.940 18 130 4.6E-46 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 RR42_RS19345 94ddaaf4aa178248280921eab793e0ea 193 Gene3D G3DSA:2.30.30.30 132 193 4.5E-31 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 RR42_RS12830 fce013511f10070189f314e5145516c7 534 Gene3D G3DSA:1.20.1250.20 37 214 9.3E-29 T 23-04-2016 RR42_RS12830 fce013511f10070189f314e5145516c7 534 Gene3D G3DSA:1.20.1250.20 496 523 5.2E-21 T 23-04-2016 RR42_RS12830 fce013511f10070189f314e5145516c7 534 Gene3D G3DSA:1.20.1250.20 289 445 5.2E-21 T 23-04-2016 RR42_RS12830 fce013511f10070189f314e5145516c7 534 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 36 516 1.1E-153 T 23-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RR42_RS12830 fce013511f10070189f314e5145516c7 534 PANTHER PTHR23501 27 520 1.9E-224 T 23-04-2016 RR42_RS12830 fce013511f10070189f314e5145516c7 534 PANTHER PTHR23501:SF52 27 520 1.9E-224 T 23-04-2016 RR42_RS12830 fce013511f10070189f314e5145516c7 534 SUPERFAMILY SSF103473 22 217 1.24E-64 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS12830 fce013511f10070189f314e5145516c7 534 SUPERFAMILY SSF103473 495 521 1.24E-64 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS12830 fce013511f10070189f314e5145516c7 534 SUPERFAMILY SSF103473 272 443 1.24E-64 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS12830 fce013511f10070189f314e5145516c7 534 Pfam PF07690 Major Facilitator Superfamily 40 433 1.2E-50 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS12035 e203b258aa841e74c567500f3f01b16c 371 PANTHER PTHR30511:SF4 3 365 7.4E-130 T 23-04-2016 RR42_RS12035 e203b258aa841e74c567500f3f01b16c 371 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 23-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RR42_RS12035 e203b258aa841e74c567500f3f01b16c 371 SUPERFAMILY SSF50621 227 358 1.43E-44 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RR42_RS12035 e203b258aa841e74c567500f3f01b16c 371 SUPERFAMILY SSF51419 9 233 3.05E-61 T 23-04-2016 IPR029066 PLP-binding barrel RR42_RS12035 e203b258aa841e74c567500f3f01b16c 371 Hamap MF_01201 Alanine racemase. 2 360 33.238 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RR42_RS12035 e203b258aa841e74c567500f3f01b16c 371 SMART SM01005 232 360 2.0E-67 T 23-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RR42_RS12035 e203b258aa841e74c567500f3f01b16c 371 Pfam PF00842 Alanine racemase, C-terminal domain 232 357 2.1E-38 T 23-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RR42_RS12035 e203b258aa841e74c567500f3f01b16c 371 Gene3D G3DSA:3.20.20.10 13 207 7.1E-64 T 23-04-2016 IPR029066 PLP-binding barrel RR42_RS12035 e203b258aa841e74c567500f3f01b16c 371 Pfam PF01168 Alanine racemase, N-terminal domain 9 217 8.5E-65 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RR42_RS12035 e203b258aa841e74c567500f3f01b16c 371 Gene3D G3DSA:2.40.37.10 208 359 4.9E-52 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RR42_RS12035 e203b258aa841e74c567500f3f01b16c 371 PANTHER PTHR30511 3 365 7.4E-130 T 23-04-2016 RR42_RS12035 e203b258aa841e74c567500f3f01b16c 371 TIGRFAM TIGR00492 alr: alanine racemase 4 358 4.3E-108 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RR42_RS12035 e203b258aa841e74c567500f3f01b16c 371 PRINTS PR00992 Alanine racemase signature 265 280 1.2E-60 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RR42_RS12035 e203b258aa841e74c567500f3f01b16c 371 PRINTS PR00992 Alanine racemase signature 190 217 1.2E-60 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RR42_RS12035 e203b258aa841e74c567500f3f01b16c 371 PRINTS PR00992 Alanine racemase signature 248 263 1.2E-60 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RR42_RS12035 e203b258aa841e74c567500f3f01b16c 371 PRINTS PR00992 Alanine racemase signature 61 79 1.2E-60 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RR42_RS12035 e203b258aa841e74c567500f3f01b16c 371 PRINTS PR00992 Alanine racemase signature 121 133 1.2E-60 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RR42_RS12035 e203b258aa841e74c567500f3f01b16c 371 PRINTS PR00992 Alanine racemase signature 342 355 1.2E-60 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RR42_RS12035 e203b258aa841e74c567500f3f01b16c 371 PRINTS PR00992 Alanine racemase signature 155 166 1.2E-60 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RR42_RS12035 e203b258aa841e74c567500f3f01b16c 371 PRINTS PR00992 Alanine racemase signature 27 43 1.2E-60 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RR42_RS14535 043a32344cc35a67f2011026c74cab4b 381 SUPERFAMILY SSF53474 273 346 2.22E-17 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS14535 043a32344cc35a67f2011026c74cab4b 381 SUPERFAMILY SSF53474 19 130 2.22E-17 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS14535 043a32344cc35a67f2011026c74cab4b 381 Gene3D G3DSA:3.40.50.1820 277 316 1.0E-14 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS14535 043a32344cc35a67f2011026c74cab4b 381 Gene3D G3DSA:3.40.50.1820 17 133 1.0E-14 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS12265 d93a60b6cba844dad8a5acb773b822d7 209 Pfam PF06821 Serine hydrolase 9 174 3.9E-55 T 23-04-2016 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- RR42_RS12265 d93a60b6cba844dad8a5acb773b822d7 209 SUPERFAMILY SSF53474 8 172 4.71E-30 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS12265 d93a60b6cba844dad8a5acb773b822d7 209 Gene3D G3DSA:3.40.50.1820 5 179 5.2E-42 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS02365 797bdc9dc56bd4c81caad87356d8ded6 793 SMART SM01008 24 144 2.1E-56 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RR42_RS02365 797bdc9dc56bd4c81caad87356d8ded6 793 SUPERFAMILY SSF54665 4 164 2.22E-46 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RR42_RS02365 797bdc9dc56bd4c81caad87356d8ded6 793 Gene3D G3DSA:3.30.365.10 467 636 3.0E-50 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS02365 797bdc9dc56bd4c81caad87356d8ded6 793 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 159 723 3.2E-176 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS02365 797bdc9dc56bd4c81caad87356d8ded6 793 PANTHER PTHR11908:SF85 10 588 0.0 T 23-04-2016 RR42_RS02365 797bdc9dc56bd4c81caad87356d8ded6 793 PANTHER PTHR11908:SF85 605 793 0.0 T 23-04-2016 RR42_RS02365 797bdc9dc56bd4c81caad87356d8ded6 793 SUPERFAMILY SSF56003 136 786 1.7E-202 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS02365 797bdc9dc56bd4c81caad87356d8ded6 793 Gene3D G3DSA:3.30.365.10 637 786 3.8E-68 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS02365 797bdc9dc56bd4c81caad87356d8ded6 793 Gene3D G3DSA:3.30.365.10 377 466 3.8E-68 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS02365 797bdc9dc56bd4c81caad87356d8ded6 793 Gene3D G3DSA:3.90.1170.50 2 132 1.6E-44 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RR42_RS02365 797bdc9dc56bd4c81caad87356d8ded6 793 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 24 144 7.3E-31 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RR42_RS02365 797bdc9dc56bd4c81caad87356d8ded6 793 Gene3D G3DSA:3.30.365.10 298 374 1.2E-50 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS02365 797bdc9dc56bd4c81caad87356d8ded6 793 Gene3D G3DSA:3.30.365.10 133 189 1.2E-50 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS02365 797bdc9dc56bd4c81caad87356d8ded6 793 Gene3D G3DSA:3.30.365.10 190 296 7.9E-34 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS02365 797bdc9dc56bd4c81caad87356d8ded6 793 PANTHER PTHR11908 10 588 0.0 T 23-04-2016 RR42_RS02365 797bdc9dc56bd4c81caad87356d8ded6 793 PANTHER PTHR11908 605 793 0.0 T 23-04-2016 RR42_RS02010 248b3159759f03cf651c19765113cd56 200 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 93 1.0E-46 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 RR42_RS02010 248b3159759f03cf651c19765113cd56 200 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 93 21.713 T 23-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RR42_RS02010 248b3159759f03cf651c19765113cd56 200 SUPERFAMILY SSF50715 2 189 1.55E-54 T 23-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 RR42_RS02010 248b3159759f03cf651c19765113cd56 200 Pfam PF01386 Ribosomal L25p family 5 90 8.2E-23 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 RR42_RS02010 248b3159759f03cf651c19765113cd56 200 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 1 184 31.242 T 23-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RR42_RS02010 248b3159759f03cf651c19765113cd56 200 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 175 1.9E-43 T 23-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RR42_RS02010 248b3159759f03cf651c19765113cd56 200 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 98 185 2.3E-31 T 23-04-2016 IPR020057 Ribosomal protein L25, beta domain RR42_RS02010 248b3159759f03cf651c19765113cd56 200 PANTHER PTHR33284 5 196 2.8E-61 T 23-04-2016 RR42_RS02010 248b3159759f03cf651c19765113cd56 200 Gene3D G3DSA:2.40.240.10 2 93 2.6E-31 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 RR42_RS02010 248b3159759f03cf651c19765113cd56 200 Gene3D G3DSA:2.170.120.20 97 191 4.6E-31 T 23-04-2016 IPR020057 Ribosomal protein L25, beta domain RR42_RS37695 3d05245dc2aa3c8132b4b08fdcffedf5 172 SMART SM00448 39 152 9.9E-5 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS37695 3d05245dc2aa3c8132b4b08fdcffedf5 172 Gene3D G3DSA:3.40.50.2300 38 159 4.2E-15 T 23-04-2016 RR42_RS37695 3d05245dc2aa3c8132b4b08fdcffedf5 172 Pfam PF00072 Response regulator receiver domain 41 150 4.6E-8 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS37695 3d05245dc2aa3c8132b4b08fdcffedf5 172 SUPERFAMILY SSF52172 37 158 6.69E-16 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS13505 8bf628a4ffb753ce8b5464fdc08dfe84 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 16 47 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RR42_RS13505 8bf628a4ffb753ce8b5464fdc08dfe84 157 Pfam PF03449 Transcription elongation factor, N-terminal 3 73 9.5E-30 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RR42_RS13505 8bf628a4ffb753ce8b5464fdc08dfe84 157 PANTHER PTHR30437 2 156 3.0E-59 T 23-04-2016 RR42_RS13505 8bf628a4ffb753ce8b5464fdc08dfe84 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 1 155 32.399 T 23-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 RR42_RS13505 8bf628a4ffb753ce8b5464fdc08dfe84 157 SUPERFAMILY SSF46557 3 77 1.57E-26 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RR42_RS13505 8bf628a4ffb753ce8b5464fdc08dfe84 157 Gene3D G3DSA:1.10.287.180 2 74 6.8E-32 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RR42_RS13505 8bf628a4ffb753ce8b5464fdc08dfe84 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RR42_RS13505 8bf628a4ffb753ce8b5464fdc08dfe84 157 PIRSF PIRSF006092 1 157 5.9E-49 T 23-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 RR42_RS13505 8bf628a4ffb753ce8b5464fdc08dfe84 157 Gene3D G3DSA:3.10.50.30 80 156 3.0E-29 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RR42_RS13505 8bf628a4ffb753ce8b5464fdc08dfe84 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 4 154 4.7E-55 T 23-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 RR42_RS13505 8bf628a4ffb753ce8b5464fdc08dfe84 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 2.2E-26 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RR42_RS13505 8bf628a4ffb753ce8b5464fdc08dfe84 157 SUPERFAMILY SSF54534 82 156 2.22E-22 T 23-04-2016 RR42_RS12005 57108014cddd47df5d1d16869746f5ba 340 Gene3D G3DSA:3.40.50.10490 127 279 4.6E-24 T 23-04-2016 RR42_RS12005 57108014cddd47df5d1d16869746f5ba 340 SUPERFAMILY SSF46689 21 93 5.2E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS12005 57108014cddd47df5d1d16869746f5ba 340 Pfam PF01380 SIS domain 148 272 1.1E-16 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RR42_RS12005 57108014cddd47df5d1d16869746f5ba 340 PANTHER PTHR30514:SF3 16 293 2.9E-37 T 23-04-2016 RR42_RS12005 57108014cddd47df5d1d16869746f5ba 340 Gene3D G3DSA:1.10.10.10 20 94 1.6E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS12005 57108014cddd47df5d1d16869746f5ba 340 PANTHER PTHR30514 16 293 2.9E-37 T 23-04-2016 RR42_RS12005 57108014cddd47df5d1d16869746f5ba 340 Pfam PF01418 Helix-turn-helix domain, rpiR family 22 90 1.4E-13 T 23-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RR42_RS12005 57108014cddd47df5d1d16869746f5ba 340 SUPERFAMILY SSF53697 120 282 8.23E-25 T 23-04-2016 RR42_RS13550 0f57d7c41ee8a65980e2d17b45adc04f 266 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RR42_RS13550 0f57d7c41ee8a65980e2d17b45adc04f 266 SUPERFAMILY SSF51735 4 265 9.09E-81 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS13550 0f57d7c41ee8a65980e2d17b45adc04f 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 1.4E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13550 0f57d7c41ee8a65980e2d17b45adc04f 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.4E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13550 0f57d7c41ee8a65980e2d17b45adc04f 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 246 1.4E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13550 0f57d7c41ee8a65980e2d17b45adc04f 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.4E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13550 0f57d7c41ee8a65980e2d17b45adc04f 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 1.4E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13550 0f57d7c41ee8a65980e2d17b45adc04f 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 1.4E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13550 0f57d7c41ee8a65980e2d17b45adc04f 266 Pfam PF00106 short chain dehydrogenase 11 204 5.8E-61 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13550 0f57d7c41ee8a65980e2d17b45adc04f 266 PANTHER PTHR24322 51 145 1.7E-56 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13550 0f57d7c41ee8a65980e2d17b45adc04f 266 PANTHER PTHR24322 161 193 1.7E-56 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13550 0f57d7c41ee8a65980e2d17b45adc04f 266 PANTHER PTHR24322 14 33 1.7E-56 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13550 0f57d7c41ee8a65980e2d17b45adc04f 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 5.6E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13550 0f57d7c41ee8a65980e2d17b45adc04f 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 5.6E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13550 0f57d7c41ee8a65980e2d17b45adc04f 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 5.6E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13550 0f57d7c41ee8a65980e2d17b45adc04f 266 Gene3D G3DSA:3.40.50.720 5 264 3.0E-86 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS13550 0f57d7c41ee8a65980e2d17b45adc04f 266 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 183 0.0097 T 23-04-2016 RR42_RS05845 6939b2a5803be50bf23d3bd5c419dbe6 292 Gene3D G3DSA:3.40.50.300 51 243 4.3E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05845 6939b2a5803be50bf23d3bd5c419dbe6 292 SUPERFAMILY SSF52540 21 248 9.5E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05845 6939b2a5803be50bf23d3bd5c419dbe6 292 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 41 188 1.4E-13 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RR42_RS05845 6939b2a5803be50bf23d3bd5c419dbe6 292 SMART SM00382 37 195 3.8E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS05845 6939b2a5803be50bf23d3bd5c419dbe6 292 PANTHER PTHR22908 15 247 3.4E-75 T 23-04-2016 RR42_RS05845 6939b2a5803be50bf23d3bd5c419dbe6 292 Gene3D G3DSA:3.40.50.300 5 50 3.8E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12170 642f529e4ef591653960d632b8ba05c5 195 PANTHER PTHR33420 20 195 4.5E-24 T 23-04-2016 RR42_RS12170 642f529e4ef591653960d632b8ba05c5 195 Pfam PF16970 Type-1 fimbrial protein, A 74 194 1.7E-8 T 23-04-2016 RR42_RS12170 642f529e4ef591653960d632b8ba05c5 195 Gene3D G3DSA:2.60.40.1090 35 194 2.2E-25 T 23-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RR42_RS12170 642f529e4ef591653960d632b8ba05c5 195 SUPERFAMILY SSF49401 37 194 4.03E-20 T 23-04-2016 IPR008966 Adhesion domain RR42_RS23110 e911afe676c168976bbac237362d8e2f 176 Gene3D G3DSA:3.40.50.1100 3 176 1.5E-56 T 23-04-2016 RR42_RS23110 e911afe676c168976bbac237362d8e2f 176 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 176 5.8E-40 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RR42_RS23110 e911afe676c168976bbac237362d8e2f 176 PANTHER PTHR10314 1 176 2.2E-90 T 23-04-2016 RR42_RS23110 e911afe676c168976bbac237362d8e2f 176 PANTHER PTHR10314:SF30 1 176 2.2E-90 T 23-04-2016 RR42_RS23110 e911afe676c168976bbac237362d8e2f 176 SUPERFAMILY SSF53686 10 176 9.69E-49 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RR42_RS09650 49ff197d3d7b3bd7c325fd88888e216d 1063 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 628 1063 4.3E-98 T 23-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 RR42_RS09650 49ff197d3d7b3bd7c325fd88888e216d 1063 Gene3D G3DSA:2.160.20.20 260 748 2.4E-56 T 23-04-2016 IPR012332 P22 tailspike C-terminal domain-like RR42_RS09650 49ff197d3d7b3bd7c325fd88888e216d 1063 Gene3D G3DSA:2.160.20.20 50 259 1.5E-7 T 23-04-2016 IPR012332 P22 tailspike C-terminal domain-like RR42_RS09650 49ff197d3d7b3bd7c325fd88888e216d 1063 Pfam PF03212 Pertactin 619 735 6.5E-28 T 23-04-2016 IPR004899 Pertactin, central region RR42_RS09650 49ff197d3d7b3bd7c325fd88888e216d 1063 SUPERFAMILY SSF103515 782 1063 6.41E-44 T 23-04-2016 IPR005546 Autotransporter beta-domain RR42_RS09650 49ff197d3d7b3bd7c325fd88888e216d 1063 SMART SM00869 799 1052 3.9E-41 T 23-04-2016 IPR005546 Autotransporter beta-domain RR42_RS09650 49ff197d3d7b3bd7c325fd88888e216d 1063 Gene3D G3DSA:2.40.128.130 771 1063 2.1E-80 T 23-04-2016 IPR005546 Autotransporter beta-domain RR42_RS09650 49ff197d3d7b3bd7c325fd88888e216d 1063 SUPERFAMILY SSF51126 310 736 1.27E-40 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor RR42_RS09650 49ff197d3d7b3bd7c325fd88888e216d 1063 PRINTS PR01484 Pertactin virulence factor family signature 1043 1063 3.8E-60 T 23-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 RR42_RS09650 49ff197d3d7b3bd7c325fd88888e216d 1063 PRINTS PR01484 Pertactin virulence factor family signature 799 819 3.8E-60 T 23-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 RR42_RS09650 49ff197d3d7b3bd7c325fd88888e216d 1063 PRINTS PR01484 Pertactin virulence factor family signature 779 797 3.8E-60 T 23-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 RR42_RS09650 49ff197d3d7b3bd7c325fd88888e216d 1063 PRINTS PR01484 Pertactin virulence factor family signature 951 974 3.8E-60 T 23-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 RR42_RS09650 49ff197d3d7b3bd7c325fd88888e216d 1063 PRINTS PR01484 Pertactin virulence factor family signature 1018 1043 3.8E-60 T 23-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 RR42_RS09650 49ff197d3d7b3bd7c325fd88888e216d 1063 PRINTS PR01484 Pertactin virulence factor family signature 840 864 3.8E-60 T 23-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 RR42_RS09650 49ff197d3d7b3bd7c325fd88888e216d 1063 PRINTS PR01484 Pertactin virulence factor family signature 932 949 3.8E-60 T 23-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 RR42_RS09650 49ff197d3d7b3bd7c325fd88888e216d 1063 PRINTS PR01484 Pertactin virulence factor family signature 980 1001 3.8E-60 T 23-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 RR42_RS09650 49ff197d3d7b3bd7c325fd88888e216d 1063 Pfam PF03797 Autotransporter beta-domain 800 1045 5.7E-47 T 23-04-2016 IPR005546 Autotransporter beta-domain RR42_RS16600 bb21ff96bcc39014dcc9b451b5d5914e 534 Gene3D G3DSA:3.40.50.980 7 185 2.1E-35 T 23-04-2016 RR42_RS16600 bb21ff96bcc39014dcc9b451b5d5914e 534 ProSitePatterns PS00455 Putative AMP-binding domain signature. 179 190 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS16600 bb21ff96bcc39014dcc9b451b5d5914e 534 PANTHER PTHR24096 6 516 8.3E-98 T 23-04-2016 RR42_RS16600 bb21ff96bcc39014dcc9b451b5d5914e 534 Pfam PF00501 AMP-binding enzyme 13 416 3.4E-70 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS16600 bb21ff96bcc39014dcc9b451b5d5914e 534 SUPERFAMILY SSF56801 6 519 2.88E-102 T 23-04-2016 RR42_RS16600 bb21ff96bcc39014dcc9b451b5d5914e 534 Gene3D G3DSA:3.30.300.30 422 513 1.8E-9 T 23-04-2016 RR42_RS16600 bb21ff96bcc39014dcc9b451b5d5914e 534 Gene3D G3DSA:3.40.50.980 186 327 1.3E-22 T 23-04-2016 RR42_RS16600 bb21ff96bcc39014dcc9b451b5d5914e 534 Gene3D G3DSA:2.30.38.10 337 412 4.5E-15 T 23-04-2016 RR42_RS17795 b66156157083da5f859cd62bd02af605 277 Pfam PF00248 Aldo/keto reductase family 15 264 1.4E-56 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain RR42_RS17795 b66156157083da5f859cd62bd02af605 277 SUPERFAMILY SSF51430 6 267 6.42E-81 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain RR42_RS17795 b66156157083da5f859cd62bd02af605 277 PANTHER PTHR11732:SF98 1 267 1.6E-111 T 23-04-2016 RR42_RS17795 b66156157083da5f859cd62bd02af605 277 PANTHER PTHR11732 1 267 1.6E-111 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta RR42_RS17795 b66156157083da5f859cd62bd02af605 277 Gene3D G3DSA:3.20.20.100 8 268 8.5E-79 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain RR42_RS17795 b66156157083da5f859cd62bd02af605 277 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 233 248 - T 23-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RR42_RS17795 b66156157083da5f859cd62bd02af605 277 PRINTS PR00069 Aldo-keto reductase signature 125 142 2.8E-15 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RR42_RS17795 b66156157083da5f859cd62bd02af605 277 PRINTS PR00069 Aldo-keto reductase signature 95 113 2.8E-15 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RR42_RS17795 b66156157083da5f859cd62bd02af605 277 PRINTS PR00069 Aldo-keto reductase signature 39 63 2.8E-15 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RR42_RS17795 b66156157083da5f859cd62bd02af605 277 PRINTS PR00069 Aldo-keto reductase signature 199 223 2.8E-15 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RR42_RS04690 b330f787dbb7f0f7649ced6e842738d7 306 PANTHER PTHR21624:SF1 68 276 3.4E-72 T 23-04-2016 RR42_RS04690 b330f787dbb7f0f7649ced6e842738d7 306 PANTHER PTHR21624 68 276 3.4E-72 T 23-04-2016 RR42_RS04690 b330f787dbb7f0f7649ced6e842738d7 306 Pfam PF04116 Fatty acid hydroxylase superfamily 85 217 2.8E-29 T 23-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 RR42_RS01435 2435296eea74e56876876d528a56143e 248 PANTHER PTHR24322:SF211 149 179 3.1E-38 T 23-04-2016 RR42_RS01435 2435296eea74e56876876d528a56143e 248 PANTHER PTHR24322:SF211 4 133 3.1E-38 T 23-04-2016 RR42_RS01435 2435296eea74e56876876d528a56143e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 1.7E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS01435 2435296eea74e56876876d528a56143e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 1.7E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS01435 2435296eea74e56876876d528a56143e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 200 220 1.7E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS01435 2435296eea74e56876876d528a56143e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 16 1.7E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS01435 2435296eea74e56876876d528a56143e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 1.7E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS01435 2435296eea74e56876876d528a56143e 248 Gene3D G3DSA:3.40.50.720 2 236 1.3E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS01435 2435296eea74e56876876d528a56143e 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 6 235 4.5E-35 T 23-04-2016 RR42_RS01435 2435296eea74e56876876d528a56143e 248 SUPERFAMILY SSF51735 1 237 9.55E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS01435 2435296eea74e56876876d528a56143e 248 PANTHER PTHR24322 149 179 3.1E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS01435 2435296eea74e56876876d528a56143e 248 PANTHER PTHR24322 4 133 3.1E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16445 d95a64d180f477a11778d419f120605e 252 PIRSF PIRSF039085 1 252 4.0E-107 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RR42_RS16445 d95a64d180f477a11778d419f120605e 252 PANTHER PTHR24220:SF327 3 252 2.9E-126 T 23-04-2016 RR42_RS16445 d95a64d180f477a11778d419f120605e 252 SUPERFAMILY SSF52540 1 246 2.66E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS16445 d95a64d180f477a11778d419f120605e 252 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS16445 d95a64d180f477a11778d419f120605e 252 PANTHER PTHR24220 3 252 2.9E-126 T 23-04-2016 RR42_RS16445 d95a64d180f477a11778d419f120605e 252 SMART SM00382 26 224 6.6E-21 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS16445 d95a64d180f477a11778d419f120605e 252 Pfam PF00005 ABC transporter 17 176 5.4E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS16445 d95a64d180f477a11778d419f120605e 252 Gene3D G3DSA:3.40.50.300 1 248 3.1E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14395 098383b5b1a1a12c0e0eac101127b146 43 Pfam PF08085 Entericidin EcnA/B family 21 41 1.4E-6 T 23-04-2016 IPR012556 Entericidin A/B GO:0009636|GO:0016020 RR42_RS09110 e9884e4878fc37ba69ae1139f2ff77b5 858 Gene3D G3DSA:1.10.760.10 479 517 8.3E-4 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS09110 e9884e4878fc37ba69ae1139f2ff77b5 858 Gene3D G3DSA:1.10.760.10 838 857 6.7E-5 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS09110 e9884e4878fc37ba69ae1139f2ff77b5 858 Gene3D G3DSA:1.10.760.10 536 537 6.7E-5 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS09110 e9884e4878fc37ba69ae1139f2ff77b5 858 Gene3D G3DSA:1.10.760.10 625 650 6.7E-5 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS09110 e9884e4878fc37ba69ae1139f2ff77b5 858 Gene3D G3DSA:1.10.760.10 779 789 6.7E-5 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS09110 e9884e4878fc37ba69ae1139f2ff77b5 858 Gene3D G3DSA:1.10.760.10 588 589 6.7E-5 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS09110 e9884e4878fc37ba69ae1139f2ff77b5 858 SUPERFAMILY SSF46626 482 548 2.02E-5 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS09110 e9884e4878fc37ba69ae1139f2ff77b5 858 SUPERFAMILY SSF46626 479 503 1.81E-8 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS09110 e9884e4878fc37ba69ae1139f2ff77b5 858 SUPERFAMILY SSF46626 598 648 1.81E-8 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS09110 e9884e4878fc37ba69ae1139f2ff77b5 858 SUPERFAMILY SSF46626 839 857 1.81E-8 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS04130 e0f6c7be6fe8e20bbb1e77735d7bf738 615 PANTHER PTHR30332 236 541 2.1E-65 T 23-04-2016 RR42_RS04130 e0f6c7be6fe8e20bbb1e77735d7bf738 615 PRINTS PR00811 Bacterial general secretion pathway protein D signature 238 248 2.2E-11 T 23-04-2016 IPR001775 GspD/PilQ family RR42_RS04130 e0f6c7be6fe8e20bbb1e77735d7bf738 615 PRINTS PR00811 Bacterial general secretion pathway protein D signature 436 454 2.2E-11 T 23-04-2016 IPR001775 GspD/PilQ family RR42_RS04130 e0f6c7be6fe8e20bbb1e77735d7bf738 615 PRINTS PR00811 Bacterial general secretion pathway protein D signature 297 321 2.2E-11 T 23-04-2016 IPR001775 GspD/PilQ family RR42_RS04130 e0f6c7be6fe8e20bbb1e77735d7bf738 615 Pfam PF00263 Bacterial type II and III secretion system protein 302 472 6.7E-42 T 23-04-2016 IPR004846 Type II/III secretion system GO:0009306 RR42_RS04130 e0f6c7be6fe8e20bbb1e77735d7bf738 615 Pfam PF13629 Pilus formation protein N terminal region 94 162 2.8E-18 T 23-04-2016 IPR032789 Pilus formation protein, N-terminal RR42_RS00425 1eacc637ea708ce046c20e118fac38dc 337 SUPERFAMILY SSF53850 121 299 4.34E-8 T 23-04-2016 RR42_RS00425 1eacc637ea708ce046c20e118fac38dc 337 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 60 333 2.1E-73 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS00425 1eacc637ea708ce046c20e118fac38dc 337 PIRSF PIRSF017082 1 337 1.2E-74 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS00425 1eacc637ea708ce046c20e118fac38dc 337 PANTHER PTHR30349 15 299 4.4E-72 T 23-04-2016 RR42_RS00425 1eacc637ea708ce046c20e118fac38dc 337 PANTHER PTHR30349:SF16 15 299 4.4E-72 T 23-04-2016 RR42_RS10570 04e8e0a5cb3c252892d0e63c9df1d143 358 PANTHER PTHR22893 2 356 3.9E-151 T 23-04-2016 RR42_RS10570 04e8e0a5cb3c252892d0e63c9df1d143 358 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 11 335 4.7E-85 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RR42_RS10570 04e8e0a5cb3c252892d0e63c9df1d143 358 SUPERFAMILY SSF51395 2 357 1.05E-113 T 23-04-2016 RR42_RS10570 04e8e0a5cb3c252892d0e63c9df1d143 358 Gene3D G3DSA:3.20.20.70 2 355 6.5E-125 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS11670 de28173d4d4cd373bae7f0f483573910 510 Pfam PF02885 Glycosyl transferase family, helical bundle domain 107 166 1.1E-9 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain RR42_RS11670 de28173d4d4cd373bae7f0f483573910 510 Gene3D G3DSA:1.20.970.10 104 167 3.4E-11 T 23-04-2016 RR42_RS11670 de28173d4d4cd373bae7f0f483573910 510 Gene3D G3DSA:3.90.1170.30 423 498 5.3E-15 T 23-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 RR42_RS11670 de28173d4d4cd373bae7f0f483573910 510 Hamap MF_00703 Putative thymidine phosphorylase. 13 507 59.415 T 23-04-2016 IPR028579 Putative thymidine phosphorylase KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 RR42_RS11670 de28173d4d4cd373bae7f0f483573910 510 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 436 496 3.3E-10 T 23-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 RR42_RS11670 de28173d4d4cd373bae7f0f483573910 510 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 209 224 - T 23-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 RR42_RS11670 de28173d4d4cd373bae7f0f483573910 510 PANTHER PTHR10515 77 483 6.5E-119 T 23-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 RR42_RS11670 de28173d4d4cd373bae7f0f483573910 510 SUPERFAMILY SSF54680 423 504 1.26E-15 T 23-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 RR42_RS11670 de28173d4d4cd373bae7f0f483573910 510 Gene3D G3DSA:3.40.1030.10 169 419 9.2E-66 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RR42_RS11670 de28173d4d4cd373bae7f0f483573910 510 Pfam PF00591 Glycosyl transferase family, a/b domain 175 271 1.3E-6 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RR42_RS11670 de28173d4d4cd373bae7f0f483573910 510 TIGRFAM TIGR02645 ARCH_P_rylase: putative thymidine phosphorylase 12 504 7.1E-194 T 23-04-2016 IPR013466 Thymidine phosphorylase/AMP phosphorylase GO:0016763 RR42_RS11670 de28173d4d4cd373bae7f0f483573910 510 SUPERFAMILY SSF52418 169 418 6.28E-64 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RR42_RS11670 de28173d4d4cd373bae7f0f483573910 510 SUPERFAMILY SSF47648 104 170 1.14E-13 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain RR42_RS11670 de28173d4d4cd373bae7f0f483573910 510 SMART SM00941 436 503 9.6E-20 T 23-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 RR42_RS11670 de28173d4d4cd373bae7f0f483573910 510 PANTHER PTHR10515:SF0 77 483 6.5E-119 T 23-04-2016 RR42_RS11225 88b3be8cc58b14f84c9d54a549d3310e 300 SUPERFAMILY SSF161098 95 278 4.45E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS11225 88b3be8cc58b14f84c9d54a549d3310e 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 297 6.4E-23 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS11225 88b3be8cc58b14f84c9d54a549d3310e 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 32 74 1.4E-5 T 23-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RR42_RS11225 88b3be8cc58b14f84c9d54a549d3310e 300 PANTHER PTHR30465:SF58 32 298 2.8E-107 T 23-04-2016 RR42_RS11225 88b3be8cc58b14f84c9d54a549d3310e 300 PANTHER PTHR30465 32 298 2.8E-107 T 23-04-2016 RR42_RS11225 88b3be8cc58b14f84c9d54a549d3310e 300 Gene3D G3DSA:1.10.3720.10 98 294 1.9E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS06425 e54d5e35e1f1a1bfb6b8cb7159fcf22f 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 45 2.3E-6 T 23-04-2016 IPR001451 Hexapeptide repeat RR42_RS06425 e54d5e35e1f1a1bfb6b8cb7159fcf22f 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 95 128 1.3E-5 T 23-04-2016 IPR001451 Hexapeptide repeat RR42_RS06425 e54d5e35e1f1a1bfb6b8cb7159fcf22f 180 Gene3D G3DSA:2.160.10.10 4 173 2.3E-42 T 23-04-2016 RR42_RS06425 e54d5e35e1f1a1bfb6b8cb7159fcf22f 180 SUPERFAMILY SSF51161 4 174 2.22E-43 T 23-04-2016 IPR011004 Trimeric LpxA-like RR42_RS06425 e54d5e35e1f1a1bfb6b8cb7159fcf22f 180 PANTHER PTHR13061 6 177 2.5E-72 T 23-04-2016 RR42_RS20325 357bd649724f880f2939ce8bb0e041e0 334 Pfam PF00248 Aldo/keto reductase family 16 312 1.5E-78 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain RR42_RS20325 357bd649724f880f2939ce8bb0e041e0 334 Gene3D G3DSA:3.20.20.100 5 326 1.6E-116 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain RR42_RS20325 357bd649724f880f2939ce8bb0e041e0 334 PANTHER PTHR11732:SF225 2 329 1.6E-156 T 23-04-2016 RR42_RS20325 357bd649724f880f2939ce8bb0e041e0 334 PANTHER PTHR11732 2 329 1.6E-156 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta RR42_RS20325 357bd649724f880f2939ce8bb0e041e0 334 SUPERFAMILY SSF51430 5 314 5.37E-103 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain RR42_RS16460 0e303ebe0f02e9e198d114194026f6f3 159 SUPERFAMILY SSF51182 42 148 3.15E-16 T 23-04-2016 IPR011051 RmlC-like cupin domain RR42_RS16460 0e303ebe0f02e9e198d114194026f6f3 159 PANTHER PTHR38599:SF1 49 150 8.6E-27 T 23-04-2016 RR42_RS16460 0e303ebe0f02e9e198d114194026f6f3 159 Pfam PF07883 Cupin domain 74 144 1.2E-8 T 23-04-2016 IPR013096 Cupin 2, conserved barrel RR42_RS16460 0e303ebe0f02e9e198d114194026f6f3 159 Gene3D G3DSA:2.60.120.10 65 146 1.8E-18 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS16460 0e303ebe0f02e9e198d114194026f6f3 159 PANTHER PTHR38599 49 150 8.6E-27 T 23-04-2016 RR42_RS01850 f9a9d69dd63f7e8928fa277232ebbe7c 330 PIRSF PIRSF017082 1 329 6.1E-72 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS01850 f9a9d69dd63f7e8928fa277232ebbe7c 330 Gene3D G3DSA:3.40.190.10 166 246 1.4E-4 T 23-04-2016 RR42_RS01850 f9a9d69dd63f7e8928fa277232ebbe7c 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 326 1.2E-81 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS01850 f9a9d69dd63f7e8928fa277232ebbe7c 330 SUPERFAMILY SSF53850 120 290 1.26E-10 T 23-04-2016 RR42_RS01850 f9a9d69dd63f7e8928fa277232ebbe7c 330 PANTHER PTHR30349 23 324 6.0E-85 T 23-04-2016 RR42_RS01850 f9a9d69dd63f7e8928fa277232ebbe7c 330 PANTHER PTHR30349:SF32 23 324 6.0E-85 T 23-04-2016 RR42_RS10945 2f779baef79f404370a5e4dcda8a8d1d 423 PANTHER PTHR23527 8 419 2.8E-29 T 23-04-2016 RR42_RS10945 2f779baef79f404370a5e4dcda8a8d1d 423 Gene3D G3DSA:1.20.1250.20 18 213 4.7E-24 T 23-04-2016 RR42_RS10945 2f779baef79f404370a5e4dcda8a8d1d 423 Gene3D G3DSA:1.20.1250.20 233 418 1.7E-17 T 23-04-2016 RR42_RS10945 2f779baef79f404370a5e4dcda8a8d1d 423 SUPERFAMILY SSF103473 10 419 1.83E-50 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS10945 2f779baef79f404370a5e4dcda8a8d1d 423 Pfam PF07690 Major Facilitator Superfamily 31 314 6.1E-30 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS08370 64a4b6d22d3b7d6b800b6bf80ab9eef4 372 Pfam PF01757 Acyltransferase family 18 351 1.6E-23 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 RR42_RS24555 c598decc1f3f8fc59627b2f13ccf8a2d 494 SUPERFAMILY SSF53474 45 372 4.85E-27 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS24555 c598decc1f3f8fc59627b2f13ccf8a2d 494 Gene3D G3DSA:3.40.50.1820 114 342 1.4E-8 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS24555 c598decc1f3f8fc59627b2f13ccf8a2d 494 Pfam PF11339 Protein of unknown function (DUF3141) 17 494 2.8E-251 T 23-04-2016 IPR024501 Protein of unknown function DUF3141 RR42_RS01585 0f0630120d0010c58cf36af9068d8e5b 464 PIRSF PIRSF006060 6 462 2.8E-91 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RR42_RS01585 0f0630120d0010c58cf36af9068d8e5b 464 Pfam PF13520 Amino acid permease 25 430 7.3E-64 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RR42_RS01585 0f0630120d0010c58cf36af9068d8e5b 464 PANTHER PTHR11785:SF405 2 456 4.3E-215 T 23-04-2016 RR42_RS01585 0f0630120d0010c58cf36af9068d8e5b 464 PANTHER PTHR11785 2 456 4.3E-215 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RR42_RS14070 ca77729cc1bd5ecbf0ebd1bfb7fff4c2 357 PANTHER PTHR38782:SF1 17 355 1.1E-39 T 23-04-2016 RR42_RS14070 ca77729cc1bd5ecbf0ebd1bfb7fff4c2 357 Pfam PF17188 MucB/RseB C-terminal domain 244 350 1.1E-26 T 23-04-2016 IPR033436 MucB/RseB, C-terminal RR42_RS14070 ca77729cc1bd5ecbf0ebd1bfb7fff4c2 357 PANTHER PTHR38782 17 355 1.1E-39 T 23-04-2016 RR42_RS14070 ca77729cc1bd5ecbf0ebd1bfb7fff4c2 357 PIRSF PIRSF005427 13 356 2.3E-98 T 23-04-2016 IPR005588 MucB/RseB RR42_RS14070 ca77729cc1bd5ecbf0ebd1bfb7fff4c2 357 Pfam PF03888 MucB/RseB N-terminal domain 47 221 3.6E-55 T 23-04-2016 IPR033434 MucB/RseB, N-terminal RR42_RS01735 2ae169ed0dc3a3f24cf7aa1558f5947d 217 PIRSF PIRSF006324 1 214 1.2E-55 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RR42_RS01735 2ae169ed0dc3a3f24cf7aa1558f5947d 217 Pfam PF01810 LysE type translocator 16 209 3.4E-31 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RR42_RS01735 2ae169ed0dc3a3f24cf7aa1558f5947d 217 PANTHER PTHR30086 1 217 1.4E-68 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RR42_RS01735 2ae169ed0dc3a3f24cf7aa1558f5947d 217 PANTHER PTHR30086:SF14 1 217 1.4E-68 T 23-04-2016 RR42_RS02285 3c8ec91a05bffa314d7d041dfe217f77 392 PANTHER PTHR30294:SF12 20 389 1.7E-104 T 23-04-2016 RR42_RS02285 3c8ec91a05bffa314d7d041dfe217f77 392 PANTHER PTHR30294 20 389 1.7E-104 T 23-04-2016 RR42_RS02285 3c8ec91a05bffa314d7d041dfe217f77 392 Pfam PF12698 ABC-2 family transporter protein 42 384 3.3E-43 T 23-04-2016 RR42_RS09995 1b8d168e2e82a2b6a3323ad83d6a80b7 296 Gene3D G3DSA:3.60.15.10 6 293 5.9E-43 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS09995 1b8d168e2e82a2b6a3323ad83d6a80b7 296 SMART SM00849 59 273 3.3E-12 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS09995 1b8d168e2e82a2b6a3323ad83d6a80b7 296 PANTHER PTHR23200 1 274 2.2E-55 T 23-04-2016 RR42_RS09995 1b8d168e2e82a2b6a3323ad83d6a80b7 296 SUPERFAMILY SSF56281 44 294 1.76E-34 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS09995 1b8d168e2e82a2b6a3323ad83d6a80b7 296 Pfam PF00753 Metallo-beta-lactamase superfamily 63 273 2.8E-19 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS09995 1b8d168e2e82a2b6a3323ad83d6a80b7 296 PANTHER PTHR23200:SF43 1 274 2.2E-55 T 23-04-2016 RR42_RS00685 af554d9d133bfc90a2aa2ee81b43ddf3 297 SUPERFAMILY SSF52540 24 256 3.48E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS00685 af554d9d133bfc90a2aa2ee81b43ddf3 297 SMART SM00382 49 238 3.0E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS00685 af554d9d133bfc90a2aa2ee81b43ddf3 297 PANTHER PTHR24220:SF483 26 265 5.6E-115 T 23-04-2016 RR42_RS00685 af554d9d133bfc90a2aa2ee81b43ddf3 297 PANTHER PTHR24220 26 265 5.6E-115 T 23-04-2016 RR42_RS00685 af554d9d133bfc90a2aa2ee81b43ddf3 297 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS00685 af554d9d133bfc90a2aa2ee81b43ddf3 297 Pfam PF00005 ABC transporter 41 190 1.1E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS00685 af554d9d133bfc90a2aa2ee81b43ddf3 297 Gene3D G3DSA:3.40.50.300 23 251 1.0E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14285 0abfe37c24236e01986628c87e098927 205 PIRSF PIRSF006324 1 205 5.2E-57 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RR42_RS14285 0abfe37c24236e01986628c87e098927 205 Pfam PF01810 LysE type translocator 15 203 7.3E-29 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RR42_RS14285 0abfe37c24236e01986628c87e098927 205 PANTHER PTHR30086:SF14 1 203 2.0E-43 T 23-04-2016 RR42_RS14285 0abfe37c24236e01986628c87e098927 205 PANTHER PTHR30086 1 203 2.0E-43 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RR42_RS12840 bd80da1ae1d11e3a2701a05a03e31dce 122 Pfam PF02033 Ribosome-binding factor A 10 111 9.4E-28 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RR42_RS12840 bd80da1ae1d11e3a2701a05a03e31dce 122 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 13 98 1.0E-35 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RR42_RS12840 bd80da1ae1d11e3a2701a05a03e31dce 122 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 9 115 1.7E-23 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RR42_RS12840 bd80da1ae1d11e3a2701a05a03e31dce 122 PANTHER PTHR33515 10 122 7.0E-29 T 23-04-2016 RR42_RS12840 bd80da1ae1d11e3a2701a05a03e31dce 122 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 118 19.292 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RR42_RS12840 bd80da1ae1d11e3a2701a05a03e31dce 122 SUPERFAMILY SSF89919 8 114 1.7E-29 T 23-04-2016 IPR023799 Ribosome-binding factor A domain RR42_RS12840 bd80da1ae1d11e3a2701a05a03e31dce 122 Gene3D G3DSA:3.30.300.20 8 118 3.5E-33 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta RR42_RS15800 1d689f8de436af5a107a3bfd89b6c90f 298 Pfam PF00248 Aldo/keto reductase family 3 264 2.1E-26 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain RR42_RS15800 1d689f8de436af5a107a3bfd89b6c90f 298 PANTHER PTHR11732:SF14 2 264 6.0E-26 T 23-04-2016 RR42_RS15800 1d689f8de436af5a107a3bfd89b6c90f 298 PANTHER PTHR11732 2 264 6.0E-26 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta RR42_RS15800 1d689f8de436af5a107a3bfd89b6c90f 298 SUPERFAMILY SSF51430 3 264 2.23E-39 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain RR42_RS15800 1d689f8de436af5a107a3bfd89b6c90f 298 Gene3D G3DSA:3.20.20.100 2 263 7.0E-33 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain RR42_RS35330 63264b9f44ebd8473ce8328b3744f4de 393 Gene3D G3DSA:3.30.2090.10 102 186 2.2E-16 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS35330 63264b9f44ebd8473ce8328b3744f4de 393 Gene3D G3DSA:3.30.70.1430 1 58 6.2E-9 T 23-04-2016 RR42_RS35330 63264b9f44ebd8473ce8328b3744f4de 393 PANTHER PTHR32063 1 393 3.3E-142 T 23-04-2016 RR42_RS35330 63264b9f44ebd8473ce8328b3744f4de 393 SUPERFAMILY SSF82693 1 51 4.19E-7 T 23-04-2016 RR42_RS35330 63264b9f44ebd8473ce8328b3744f4de 393 SUPERFAMILY SSF82693 63 101 1.57E-17 T 23-04-2016 RR42_RS35330 63264b9f44ebd8473ce8328b3744f4de 393 SUPERFAMILY SSF82693 187 241 1.57E-17 T 23-04-2016 RR42_RS35330 63264b9f44ebd8473ce8328b3744f4de 393 Gene3D G3DSA:1.20.1640.10 204 393 3.6E-49 T 23-04-2016 RR42_RS35330 63264b9f44ebd8473ce8328b3744f4de 393 Pfam PF00873 AcrB/AcrD/AcrF family 1 393 3.5E-111 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS35330 63264b9f44ebd8473ce8328b3744f4de 393 SUPERFAMILY SSF82714 103 184 2.35E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS35330 63264b9f44ebd8473ce8328b3744f4de 393 PANTHER PTHR32063:SF0 1 393 3.3E-142 T 23-04-2016 RR42_RS35330 63264b9f44ebd8473ce8328b3744f4de 393 SUPERFAMILY SSF82866 209 393 1.57E-42 T 23-04-2016 RR42_RS02710 895646946068376199568bb356ddd8af 377 PANTHER PTHR23344 41 370 9.8E-111 T 23-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 RR42_RS02710 895646946068376199568bb356ddd8af 377 PANTHER PTHR23344:SF7 41 370 9.8E-111 T 23-04-2016 RR42_RS02710 895646946068376199568bb356ddd8af 377 Gene3D G3DSA:3.20.20.190 40 372 5.4E-93 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RR42_RS02710 895646946068376199568bb356ddd8af 377 SUPERFAMILY SSF51695 39 372 3.14E-79 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RR42_RS02710 895646946068376199568bb356ddd8af 377 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 45 366 6.6E-49 T 23-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 RR42_RS05490 f55ad8286b0c24bc7b125f351e021dfa 334 SUPERFAMILY SSF50129 1 143 3.3E-36 T 23-04-2016 IPR011032 GroES-like RR42_RS05490 f55ad8286b0c24bc7b125f351e021dfa 334 Gene3D G3DSA:3.40.50.720 156 271 6.3E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS05490 f55ad8286b0c24bc7b125f351e021dfa 334 SMART SM00829 10 332 4.2E-48 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RR42_RS05490 f55ad8286b0c24bc7b125f351e021dfa 334 PANTHER PTHR11695 15 333 5.5E-129 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RR42_RS05490 f55ad8286b0c24bc7b125f351e021dfa 334 PANTHER PTHR11695:SF610 15 333 5.5E-129 T 23-04-2016 RR42_RS05490 f55ad8286b0c24bc7b125f351e021dfa 334 Pfam PF00107 Zinc-binding dehydrogenase 160 285 4.7E-33 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RR42_RS05490 f55ad8286b0c24bc7b125f351e021dfa 334 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 334 3.0E-145 T 23-04-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- RR42_RS05490 f55ad8286b0c24bc7b125f351e021dfa 334 Gene3D G3DSA:3.90.180.10 1 155 1.1E-40 T 23-04-2016 IPR011032 GroES-like RR42_RS05490 f55ad8286b0c24bc7b125f351e021dfa 334 SUPERFAMILY SSF51735 116 296 1.28E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS18130 90b19617ea398c789c4863ecade3e308 365 PRINTS PR00184 Neisseria sp. porin signature 60 85 3.5E-6 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RR42_RS18130 90b19617ea398c789c4863ecade3e308 365 PRINTS PR00184 Neisseria sp. porin signature 194 211 3.5E-6 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RR42_RS18130 90b19617ea398c789c4863ecade3e308 365 PRINTS PR00184 Neisseria sp. porin signature 303 327 3.5E-6 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RR42_RS18130 90b19617ea398c789c4863ecade3e308 365 SUPERFAMILY SSF56935 21 365 2.23E-83 T 23-04-2016 RR42_RS18130 90b19617ea398c789c4863ecade3e308 365 Gene3D G3DSA:2.40.160.10 21 365 1.2E-92 T 23-04-2016 IPR023614 Porin domain RR42_RS18130 90b19617ea398c789c4863ecade3e308 365 Pfam PF13609 Gram-negative porin 7 330 1.1E-53 T 23-04-2016 RR42_RS17310 935f5b00c9f4ead2bf07cd04886d361e 374 SUPERFAMILY SSF55103 193 372 1.55E-19 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RR42_RS17310 935f5b00c9f4ead2bf07cd04886d361e 374 SUPERFAMILY SSF56176 16 184 1.4E-31 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RR42_RS17310 935f5b00c9f4ead2bf07cd04886d361e 374 PANTHER PTHR11748 19 370 8.7E-77 T 23-04-2016 RR42_RS17310 935f5b00c9f4ead2bf07cd04886d361e 374 Gene3D G3DSA:3.30.465.10 57 184 5.1E-19 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RR42_RS17310 935f5b00c9f4ead2bf07cd04886d361e 374 Pfam PF01565 FAD binding domain 14 146 2.1E-20 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RR42_RS17310 935f5b00c9f4ead2bf07cd04886d361e 374 PANTHER PTHR11748:SF1 19 370 8.7E-77 T 23-04-2016 RR42_RS17310 935f5b00c9f4ead2bf07cd04886d361e 374 Gene3D G3DSA:1.10.45.10 350 370 2.7E-4 T 23-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RR42_RS19565 f22d8c96a090310d220cd50f812f91dc 503 Gene3D G3DSA:3.40.50.720 192 435 2.8E-23 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS19565 f22d8c96a090310d220cd50f812f91dc 503 PANTHER PTHR11092:SF0 186 501 3.0E-98 T 23-04-2016 RR42_RS19565 f22d8c96a090310d220cd50f812f91dc 503 Pfam PF08338 Domain of unknown function (DUF1731) 449 495 1.7E-16 T 23-04-2016 IPR013549 Domain of unknown function DUF1731 RR42_RS19565 f22d8c96a090310d220cd50f812f91dc 503 Pfam PF01370 NAD dependent epimerase/dehydratase family 195 407 5.3E-15 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RR42_RS19565 f22d8c96a090310d220cd50f812f91dc 503 SUPERFAMILY SSF51735 194 495 6.47E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS19565 f22d8c96a090310d220cd50f812f91dc 503 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 195 492 9.6E-80 T 23-04-2016 IPR010099 Epimerase family protein SDR39U1 RR42_RS19565 f22d8c96a090310d220cd50f812f91dc 503 PANTHER PTHR11092 186 501 3.0E-98 T 23-04-2016 IPR010099 Epimerase family protein SDR39U1 RR42_RS07875 f1abc86050a2d5dedfdeee2c192659da 433 PANTHER PTHR23508:SF14 14 418 4.3E-268 T 23-04-2016 RR42_RS07875 f1abc86050a2d5dedfdeee2c192659da 433 ProSitePatterns PS00217 Sugar transport proteins signature 2. 123 148 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RR42_RS07875 f1abc86050a2d5dedfdeee2c192659da 433 ProSitePatterns PS00216 Sugar transport proteins signature 1. 291 308 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RR42_RS07875 f1abc86050a2d5dedfdeee2c192659da 433 PANTHER PTHR23508 14 418 4.3E-268 T 23-04-2016 RR42_RS07875 f1abc86050a2d5dedfdeee2c192659da 433 Gene3D G3DSA:1.20.1250.20 235 417 2.1E-21 T 23-04-2016 RR42_RS07875 f1abc86050a2d5dedfdeee2c192659da 433 Gene3D G3DSA:1.20.1250.20 12 218 2.0E-25 T 23-04-2016 RR42_RS07875 f1abc86050a2d5dedfdeee2c192659da 433 Pfam PF07690 Major Facilitator Superfamily 19 368 1.2E-30 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS07875 f1abc86050a2d5dedfdeee2c192659da 433 SUPERFAMILY SSF103473 12 421 1.96E-65 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS19265 7cf5e7294ec522e845f5b9d522132951 413 SUPERFAMILY SSF51905 1 165 3.11E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS19265 7cf5e7294ec522e845f5b9d522132951 413 SUPERFAMILY SSF51905 282 358 3.11E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS19265 7cf5e7294ec522e845f5b9d522132951 413 Gene3D G3DSA:3.50.50.60 273 354 2.4E-12 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS19265 7cf5e7294ec522e845f5b9d522132951 413 Gene3D G3DSA:3.50.50.60 2 170 2.4E-12 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS07270 851b78ee6b66d78b81c779e022baeb37 1626 PANTHER PTHR11606 688 1113 0.0 T 23-04-2016 RR42_RS07270 851b78ee6b66d78b81c779e022baeb37 1626 PANTHER PTHR11606 14 151 0.0 T 23-04-2016 RR42_RS07270 851b78ee6b66d78b81c779e022baeb37 1626 PANTHER PTHR11606 1138 1383 0.0 T 23-04-2016 RR42_RS07270 851b78ee6b66d78b81c779e022baeb37 1626 PANTHER PTHR11606 225 573 0.0 T 23-04-2016 RR42_RS07270 851b78ee6b66d78b81c779e022baeb37 1626 SUPERFAMILY SSF53223 773 957 4.51E-25 T 23-04-2016 RR42_RS07270 851b78ee6b66d78b81c779e022baeb37 1626 PIRSF PIRSF036761 3 1624 0.0 T 23-04-2016 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 RR42_RS07270 851b78ee6b66d78b81c779e022baeb37 1626 SUPERFAMILY SSF51735 1099 1297 7.22E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS07270 851b78ee6b66d78b81c779e022baeb37 1626 SUPERFAMILY SSF51735 961 1063 7.22E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS07270 851b78ee6b66d78b81c779e022baeb37 1626 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 78 1616 0.0 T 23-04-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 RR42_RS07270 851b78ee6b66d78b81c779e022baeb37 1626 PANTHER PTHR11606:SF1 688 1113 0.0 T 23-04-2016 RR42_RS07270 851b78ee6b66d78b81c779e022baeb37 1626 PANTHER PTHR11606:SF1 14 151 0.0 T 23-04-2016 RR42_RS07270 851b78ee6b66d78b81c779e022baeb37 1626 PANTHER PTHR11606:SF1 1138 1383 0.0 T 23-04-2016 RR42_RS07270 851b78ee6b66d78b81c779e022baeb37 1626 PANTHER PTHR11606:SF1 225 573 0.0 T 23-04-2016 RR42_RS07270 851b78ee6b66d78b81c779e022baeb37 1626 Gene3D G3DSA:3.40.50.720 1104 1194 3.3E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS07270 851b78ee6b66d78b81c779e022baeb37 1626 Gene3D G3DSA:3.40.50.720 958 1069 3.3E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS14580 98adfb436d6c4171a9d3bb1bbfdfe847 334 SUPERFAMILY SSF103481 201 305 1.57E-9 T 23-04-2016 RR42_RS14580 98adfb436d6c4171a9d3bb1bbfdfe847 334 SUPERFAMILY SSF103481 57 155 1.44E-9 T 23-04-2016 RR42_RS14580 98adfb436d6c4171a9d3bb1bbfdfe847 334 PANTHER PTHR12715:SF9 22 308 3.6E-72 T 23-04-2016 RR42_RS14580 98adfb436d6c4171a9d3bb1bbfdfe847 334 Pfam PF00892 EamA-like transporter family 170 302 2.1E-13 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS14580 98adfb436d6c4171a9d3bb1bbfdfe847 334 Pfam PF00892 EamA-like transporter family 22 148 9.7E-12 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS14580 98adfb436d6c4171a9d3bb1bbfdfe847 334 PANTHER PTHR12715 22 308 3.6E-72 T 23-04-2016 RR42_RS20720 d075d99ceb31de2bc920f5bc039e1626 304 PANTHER PTHR24322:SF365 11 141 7.2E-56 T 23-04-2016 RR42_RS20720 d075d99ceb31de2bc920f5bc039e1626 304 PANTHER PTHR24322:SF365 157 191 7.2E-56 T 23-04-2016 RR42_RS20720 d075d99ceb31de2bc920f5bc039e1626 304 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 195 3.9E-4 T 23-04-2016 RR42_RS20720 d075d99ceb31de2bc920f5bc039e1626 304 SUPERFAMILY SSF51735 1 271 5.72E-65 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS20720 d075d99ceb31de2bc920f5bc039e1626 304 PANTHER PTHR24322 11 141 7.2E-56 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS20720 d075d99ceb31de2bc920f5bc039e1626 304 PANTHER PTHR24322 157 191 7.2E-56 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS20720 d075d99ceb31de2bc920f5bc039e1626 304 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RR42_RS20720 d075d99ceb31de2bc920f5bc039e1626 304 Gene3D G3DSA:3.40.50.720 6 245 3.1E-64 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS20720 d075d99ceb31de2bc920f5bc039e1626 304 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 6.8E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS20720 d075d99ceb31de2bc920f5bc039e1626 304 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 6.8E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS20720 d075d99ceb31de2bc920f5bc039e1626 304 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 6.8E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS20720 d075d99ceb31de2bc920f5bc039e1626 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.5E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS20720 d075d99ceb31de2bc920f5bc039e1626 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.5E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS20720 d075d99ceb31de2bc920f5bc039e1626 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.5E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS20720 d075d99ceb31de2bc920f5bc039e1626 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.5E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS20720 d075d99ceb31de2bc920f5bc039e1626 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.5E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS20720 d075d99ceb31de2bc920f5bc039e1626 304 Pfam PF00106 short chain dehydrogenase 7 201 1.8E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS14795 66891611e4d2a9c1408ca5d7d9d2c0ec 232 Gene3D G3DSA:2.60.120.10 3 231 9.2E-76 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS14795 66891611e4d2a9c1408ca5d7d9d2c0ec 232 Pfam PF02678 Pirin 10 119 2.6E-37 T 23-04-2016 IPR003829 Pirin, N-terminal domain RR42_RS14795 66891611e4d2a9c1408ca5d7d9d2c0ec 232 PANTHER PTHR13903 1 232 3.6E-114 T 23-04-2016 IPR012093 Pirin RR42_RS14795 66891611e4d2a9c1408ca5d7d9d2c0ec 232 PANTHER PTHR13903:SF7 1 232 3.6E-114 T 23-04-2016 RR42_RS14795 66891611e4d2a9c1408ca5d7d9d2c0ec 232 PIRSF PIRSF006232 1 230 6.0E-56 T 23-04-2016 IPR012093 Pirin RR42_RS14795 66891611e4d2a9c1408ca5d7d9d2c0ec 232 SUPERFAMILY SSF51182 1 231 3.74E-81 T 23-04-2016 IPR011051 RmlC-like cupin domain RR42_RS20715 7f4ac2824b5de31ee9da9d586949b494 524 SUPERFAMILY SSF51905 28 248 5.18E-58 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS20715 7f4ac2824b5de31ee9da9d586949b494 524 SUPERFAMILY SSF51905 315 432 5.18E-58 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS20715 7f4ac2824b5de31ee9da9d586949b494 524 Gene3D G3DSA:3.50.50.60 320 507 4.9E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS20715 7f4ac2824b5de31ee9da9d586949b494 524 Gene3D G3DSA:3.50.50.60 16 232 2.3E-62 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS20715 7f4ac2824b5de31ee9da9d586949b494 524 PANTHER PTHR23023:SF132 23 523 1.5E-237 T 23-04-2016 RR42_RS20715 7f4ac2824b5de31ee9da9d586949b494 524 PANTHER PTHR23023 23 523 1.5E-237 T 23-04-2016 RR42_RS20715 7f4ac2824b5de31ee9da9d586949b494 524 Pfam PF00743 Flavin-binding monooxygenase-like 29 363 1.6E-14 T 23-04-2016 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 RR42_RS16130 8d7604044f2b26161d6cc93b70944d06 278 SMART SM00382 38 226 3.6E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS16130 8d7604044f2b26161d6cc93b70944d06 278 PANTHER PTHR24220 15 241 1.4E-65 T 23-04-2016 RR42_RS16130 8d7604044f2b26161d6cc93b70944d06 278 Gene3D G3DSA:3.40.50.300 16 239 8.0E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS16130 8d7604044f2b26161d6cc93b70944d06 278 PANTHER PTHR24220:SF266 15 241 1.4E-65 T 23-04-2016 RR42_RS16130 8d7604044f2b26161d6cc93b70944d06 278 SUPERFAMILY SSF52540 14 240 6.71E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS16130 8d7604044f2b26161d6cc93b70944d06 278 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS16130 8d7604044f2b26161d6cc93b70944d06 278 Pfam PF00005 ABC transporter 29 177 5.3E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS06145 dc09500f5fcde78bf86dd30bb7ed8165 274 SMART SM00460 164 229 5.0E-12 T 23-04-2016 IPR002931 Transglutaminase-like RR42_RS06145 dc09500f5fcde78bf86dd30bb7ed8165 274 Gene3D G3DSA:3.90.260.10 168 259 1.3E-9 T 23-04-2016 IPR002931 Transglutaminase-like RR42_RS06145 dc09500f5fcde78bf86dd30bb7ed8165 274 PANTHER PTHR33490 1 270 6.3E-52 T 23-04-2016 RR42_RS06145 dc09500f5fcde78bf86dd30bb7ed8165 274 SUPERFAMILY SSF54001 106 254 9.39E-36 T 23-04-2016 RR42_RS06145 dc09500f5fcde78bf86dd30bb7ed8165 274 PANTHER PTHR33490:SF5 1 270 6.3E-52 T 23-04-2016 RR42_RS06145 dc09500f5fcde78bf86dd30bb7ed8165 274 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 79 1.4E-21 T 23-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal RR42_RS06145 dc09500f5fcde78bf86dd30bb7ed8165 274 Pfam PF01841 Transglutaminase-like superfamily 136 226 1.5E-20 T 23-04-2016 IPR002931 Transglutaminase-like RR42_RS07520 aa5ce6434b4ba529ef85fcffd4a1a07e 566 SUPERFAMILY SSF56801 26 545 7.06E-145 T 23-04-2016 RR42_RS07520 aa5ce6434b4ba529ef85fcffd4a1a07e 566 Gene3D G3DSA:2.30.38.10 368 440 3.1E-19 T 23-04-2016 RR42_RS07520 aa5ce6434b4ba529ef85fcffd4a1a07e 566 Gene3D G3DSA:3.40.50.980 45 205 9.8E-32 T 23-04-2016 RR42_RS07520 aa5ce6434b4ba529ef85fcffd4a1a07e 566 TIGRFAM TIGR02262 benz_CoA_lig: benzoate-CoA ligase family 33 541 1.9E-241 T 23-04-2016 IPR011957 Benzoate-CoA ligase family GO:0005524|GO:0016405 RR42_RS07520 aa5ce6434b4ba529ef85fcffd4a1a07e 566 PANTHER PTHR24095 30 545 3.3E-156 T 23-04-2016 RR42_RS07520 aa5ce6434b4ba529ef85fcffd4a1a07e 566 Pfam PF00501 AMP-binding enzyme 46 446 3.3E-91 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS07520 aa5ce6434b4ba529ef85fcffd4a1a07e 566 Gene3D G3DSA:3.30.300.30 441 543 2.4E-29 T 23-04-2016 RR42_RS07520 aa5ce6434b4ba529ef85fcffd4a1a07e 566 Pfam PF13193 AMP-binding enzyme C-terminal domain 455 533 2.2E-21 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RR42_RS07520 aa5ce6434b4ba529ef85fcffd4a1a07e 566 Gene3D G3DSA:3.40.50.980 206 367 3.3E-36 T 23-04-2016 RR42_RS19960 75b2c402dd4cae2de9e24b8842897411 221 Gene3D G3DSA:1.10.357.10 8 177 1.2E-31 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS19960 75b2c402dd4cae2de9e24b8842897411 221 SUPERFAMILY SSF46689 8 70 1.65E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS19960 75b2c402dd4cae2de9e24b8842897411 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 8.2E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS19960 75b2c402dd4cae2de9e24b8842897411 221 PANTHER PTHR30055 8 204 7.3E-38 T 23-04-2016 RR42_RS19960 75b2c402dd4cae2de9e24b8842897411 221 PANTHER PTHR30055:SF39 8 204 7.3E-38 T 23-04-2016 RR42_RS02260 47f2f069931c206d13a40af46477cbee 450 SUPERFAMILY SSF46626 72 242 4.19E-28 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS02260 47f2f069931c206d13a40af46477cbee 450 PANTHER PTHR30600:SF5 415 450 6.4E-84 T 23-04-2016 RR42_RS02260 47f2f069931c206d13a40af46477cbee 450 PANTHER PTHR30600:SF5 71 379 6.4E-84 T 23-04-2016 RR42_RS02260 47f2f069931c206d13a40af46477cbee 450 Gene3D G3DSA:1.10.760.10 75 264 6.5E-34 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS02260 47f2f069931c206d13a40af46477cbee 450 Gene3D G3DSA:1.10.760.10 265 444 9.6E-32 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS02260 47f2f069931c206d13a40af46477cbee 450 Pfam PF00034 Cytochrome c 268 440 1.1E-5 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS02260 47f2f069931c206d13a40af46477cbee 450 Pfam PF03150 Di-haem cytochrome c peroxidase 81 260 1.1E-33 T 23-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 RR42_RS02260 47f2f069931c206d13a40af46477cbee 450 SUPERFAMILY SSF46626 243 311 1.83E-31 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS02260 47f2f069931c206d13a40af46477cbee 450 SUPERFAMILY SSF46626 342 440 1.83E-31 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS02260 47f2f069931c206d13a40af46477cbee 450 PANTHER PTHR30600 415 450 6.4E-84 T 23-04-2016 RR42_RS02260 47f2f069931c206d13a40af46477cbee 450 PANTHER PTHR30600 71 379 6.4E-84 T 23-04-2016 RR42_RS07285 dc9051048066ae0ea20e7461d3f9de76 324 PANTHER PTHR30349:SF16 10 321 1.1E-96 T 23-04-2016 RR42_RS07285 dc9051048066ae0ea20e7461d3f9de76 324 PANTHER PTHR30349 10 321 1.1E-96 T 23-04-2016 RR42_RS07285 dc9051048066ae0ea20e7461d3f9de76 324 PIRSF PIRSF017082 1 323 7.9E-84 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS07285 dc9051048066ae0ea20e7461d3f9de76 324 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 320 1.1E-85 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS07285 dc9051048066ae0ea20e7461d3f9de76 324 SUPERFAMILY SSF53850 113 285 1.19E-6 T 23-04-2016 RR42_RS03435 758eb74c68c04629c9e290df8f030b08 269 SMART SM00530 24 96 1.1E-4 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RR42_RS03435 758eb74c68c04629c9e290df8f030b08 269 PANTHER PTHR35010 14 269 4.1E-81 T 23-04-2016 RR42_RS03435 758eb74c68c04629c9e290df8f030b08 269 Pfam PF13560 Helix-turn-helix domain 21 99 1.2E-13 T 23-04-2016 RR42_RS03435 758eb74c68c04629c9e290df8f030b08 269 Gene3D G3DSA:1.10.260.40 14 94 1.1E-12 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS03435 758eb74c68c04629c9e290df8f030b08 269 PANTHER PTHR35010:SF2 14 269 4.1E-81 T 23-04-2016 RR42_RS03435 758eb74c68c04629c9e290df8f030b08 269 SUPERFAMILY SSF47413 43 95 8.26E-6 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS35815 36a899a0ff3d6e59d9f60e3b8ab496db 287 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 51 271 1.0E-30 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RR42_RS35815 36a899a0ff3d6e59d9f60e3b8ab496db 287 SUPERFAMILY SSF52540 50 283 1.54E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS35815 36a899a0ff3d6e59d9f60e3b8ab496db 287 PANTHER PTHR21343:SF1 30 287 3.0E-139 T 23-04-2016 RR42_RS35815 36a899a0ff3d6e59d9f60e3b8ab496db 287 Gene3D G3DSA:3.40.50.300 50 282 6.0E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS35815 36a899a0ff3d6e59d9f60e3b8ab496db 287 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 51 283 2.2E-95 T 23-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 RR42_RS35815 36a899a0ff3d6e59d9f60e3b8ab496db 287 Hamap MF_00028 Cobyric acid synthase [cobQ]. 49 287 115.074 T 23-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 RR42_RS35815 36a899a0ff3d6e59d9f60e3b8ab496db 287 PANTHER PTHR21343 30 287 3.0E-139 T 23-04-2016 RR42_RS10875 b16b95c38b57c451b9e2edf11101ed6c 429 PANTHER PTHR23150:SF24 18 429 1.1E-113 T 23-04-2016 RR42_RS10875 b16b95c38b57c451b9e2edf11101ed6c 429 SUPERFAMILY SSF109854 13 151 1.72E-8 T 23-04-2016 RR42_RS10875 b16b95c38b57c451b9e2edf11101ed6c 429 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 20 426 5.8E-175 T 23-04-2016 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255|UniPathway: UPA01014 RR42_RS10875 b16b95c38b57c451b9e2edf11101ed6c 429 Pfam PF03781 Sulfatase-modifying factor enzyme 1 187 324 8.0E-25 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme RR42_RS10875 b16b95c38b57c451b9e2edf11101ed6c 429 Pfam PF03781 Sulfatase-modifying factor enzyme 1 344 426 6.4E-10 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme RR42_RS10875 b16b95c38b57c451b9e2edf11101ed6c 429 SUPERFAMILY SSF56436 186 428 1.18E-70 T 23-04-2016 IPR016187 C-type lectin fold RR42_RS10875 b16b95c38b57c451b9e2edf11101ed6c 429 PANTHER PTHR23150 18 429 1.1E-113 T 23-04-2016 RR42_RS10875 b16b95c38b57c451b9e2edf11101ed6c 429 Pfam PF12867 DinB superfamily 22 153 4.3E-13 T 23-04-2016 IPR024775 DinB-like domain RR42_RS10875 b16b95c38b57c451b9e2edf11101ed6c 429 Gene3D G3DSA:3.90.1580.10 181 428 6.7E-62 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme RR42_RS14635 b9c0242ccc0cc3ad4310e962b4bf8c7c 466 PANTHER PTHR11785 1 456 2.0E-236 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RR42_RS14635 b9c0242ccc0cc3ad4310e962b4bf8c7c 466 PIRSF PIRSF006060 1 459 1.4E-71 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RR42_RS14635 b9c0242ccc0cc3ad4310e962b4bf8c7c 466 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 23-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RR42_RS14635 b9c0242ccc0cc3ad4310e962b4bf8c7c 466 PANTHER PTHR11785:SF351 1 456 2.0E-236 T 23-04-2016 RR42_RS14635 b9c0242ccc0cc3ad4310e962b4bf8c7c 466 Pfam PF00324 Amino acid permease 16 451 3.6E-104 T 23-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RR42_RS13265 ebcb9a47086ae8b58d2bd8d1155c0aff 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 1.4E-16 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS13265 ebcb9a47086ae8b58d2bd8d1155c0aff 301 PANTHER PTHR30419 1 294 2.7E-90 T 23-04-2016 RR42_RS13265 ebcb9a47086ae8b58d2bd8d1155c0aff 301 Gene3D G3DSA:3.40.190.10 180 266 4.1E-19 T 23-04-2016 RR42_RS13265 ebcb9a47086ae8b58d2bd8d1155c0aff 301 Gene3D G3DSA:3.40.190.10 94 179 2.8E-23 T 23-04-2016 RR42_RS13265 ebcb9a47086ae8b58d2bd8d1155c0aff 301 SUPERFAMILY SSF46785 5 115 5.99E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS13265 ebcb9a47086ae8b58d2bd8d1155c0aff 301 Pfam PF03466 LysR substrate binding domain 92 293 5.2E-38 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS13265 ebcb9a47086ae8b58d2bd8d1155c0aff 301 SUPERFAMILY SSF53850 93 296 1.94E-41 T 23-04-2016 RR42_RS13265 ebcb9a47086ae8b58d2bd8d1155c0aff 301 PANTHER PTHR30419:SF2 1 294 2.7E-90 T 23-04-2016 RR42_RS13265 ebcb9a47086ae8b58d2bd8d1155c0aff 301 Gene3D G3DSA:1.10.10.10 7 91 1.5E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS01265 ff721e32b2e6811227098895ad1c2682 387 PIRSF PIRSF000497 1 386 1.5E-171 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RR42_RS01265 ff721e32b2e6811227098895ad1c2682 387 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 102 2.2E-40 T 23-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RR42_RS01265 ff721e32b2e6811227098895ad1c2682 387 Gene3D G3DSA:3.30.300.10 246 385 5.3E-69 T 23-04-2016 RR42_RS01265 ff721e32b2e6811227098895ad1c2682 387 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 119 129 - T 23-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RR42_RS01265 ff721e32b2e6811227098895ad1c2682 387 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 384 6.2E-182 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RR42_RS01265 ff721e32b2e6811227098895ad1c2682 387 Pfam PF02772 S-adenosylmethionine synthetase, central domain 118 233 7.6E-47 T 23-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RR42_RS01265 ff721e32b2e6811227098895ad1c2682 387 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 261 269 - T 23-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RR42_RS01265 ff721e32b2e6811227098895ad1c2682 387 SUPERFAMILY SSF55973 113 234 1.57E-51 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RR42_RS01265 ff721e32b2e6811227098895ad1c2682 387 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 235 373 4.4E-68 T 23-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RR42_RS01265 ff721e32b2e6811227098895ad1c2682 387 SUPERFAMILY SSF55973 4 110 1.84E-45 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RR42_RS01265 ff721e32b2e6811227098895ad1c2682 387 Gene3D G3DSA:3.30.300.10 12 135 3.2E-46 T 23-04-2016 RR42_RS01265 ff721e32b2e6811227098895ad1c2682 387 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 385 56.464 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RR42_RS01265 ff721e32b2e6811227098895ad1c2682 387 SUPERFAMILY SSF55973 235 385 7.3E-68 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RR42_RS01265 ff721e32b2e6811227098895ad1c2682 387 PANTHER PTHR11964 2 380 8.4E-268 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RR42_RS01265 ff721e32b2e6811227098895ad1c2682 387 Gene3D G3DSA:3.30.300.10 136 235 6.8E-44 T 23-04-2016 RR42_RS02610 c6faaf3b9ded3bc6f26f76cdb5a59e0b 344 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 5 343 6.1E-144 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RR42_RS02610 c6faaf3b9ded3bc6f26f76cdb5a59e0b 344 Gene3D G3DSA:3.20.20.140 1 342 5.1E-137 T 23-04-2016 RR42_RS02610 c6faaf3b9ded3bc6f26f76cdb5a59e0b 344 PANTHER PTHR11647:SF59 1 319 4.3E-164 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RR42_RS02610 c6faaf3b9ded3bc6f26f76cdb5a59e0b 344 PANTHER PTHR11647 1 319 4.3E-164 T 23-04-2016 RR42_RS02610 c6faaf3b9ded3bc6f26f76cdb5a59e0b 344 PIRSF PIRSF001237 1 344 1.9E-139 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RR42_RS02610 c6faaf3b9ded3bc6f26f76cdb5a59e0b 344 Hamap MF_00219 Dihydroorotase [pyrC]. 3 344 43.895 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RR42_RS02610 c6faaf3b9ded3bc6f26f76cdb5a59e0b 344 SUPERFAMILY SSF51556 3 343 1.2E-148 T 23-04-2016 IPR032466 Metal-dependent hydrolase RR42_RS02610 c6faaf3b9ded3bc6f26f76cdb5a59e0b 344 ProSitePatterns PS00482 Dihydroorotase signature 1. 12 20 - T 23-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RR42_RS02610 c6faaf3b9ded3bc6f26f76cdb5a59e0b 344 Pfam PF01979 Amidohydrolase family 12 312 2.8E-22 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RR42_RS02610 c6faaf3b9ded3bc6f26f76cdb5a59e0b 344 ProSitePatterns PS00483 Dihydroorotase signature 2. 246 257 - T 23-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RR42_RS20150 5b771b4863302d9ca4e987abcfc1c6c7 371 Pfam PF11738 Protein of unknown function (DUF3298) 269 345 4.1E-12 T 23-04-2016 IPR021729 Domain of unknown function DUF3298 RR42_RS20150 5b771b4863302d9ca4e987abcfc1c6c7 371 Gene3D G3DSA:3.90.640.20 270 351 1.7E-11 T 23-04-2016 IPR021729 Domain of unknown function DUF3298 RR42_RS26340 e1a0f36e84a6766744467c838917ea42 253 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 1 85 3.1E-22 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RR42_RS26340 e1a0f36e84a6766744467c838917ea42 253 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 215 253 2.6E-5 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RR42_RS26340 e1a0f36e84a6766744467c838917ea42 253 PANTHER PTHR23309 192 253 1.2E-69 T 23-04-2016 RR42_RS26340 e1a0f36e84a6766744467c838917ea42 253 PANTHER PTHR23309 1 103 1.2E-69 T 23-04-2016 RR42_RS26340 e1a0f36e84a6766744467c838917ea42 253 SUPERFAMILY SSF48179 3 96 2.13E-24 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RR42_RS26340 e1a0f36e84a6766744467c838917ea42 253 PANTHER PTHR23309:SF12 192 253 1.2E-69 T 23-04-2016 RR42_RS26340 e1a0f36e84a6766744467c838917ea42 253 PANTHER PTHR23309:SF12 1 103 1.2E-69 T 23-04-2016 RR42_RS26340 e1a0f36e84a6766744467c838917ea42 253 Gene3D G3DSA:1.10.1040.10 215 253 7.7E-5 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RR42_RS26340 e1a0f36e84a6766744467c838917ea42 253 Gene3D G3DSA:1.10.1040.10 1 85 8.2E-24 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RR42_RS15845 61c2682961266849558b700a609c1e23 284 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 13 261 1.3E-72 T 23-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 RR42_RS15845 61c2682961266849558b700a609c1e23 284 PIRSF PIRSF000903 10 281 8.3E-100 T 23-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 RR42_RS15845 61c2682961266849558b700a609c1e23 284 PANTHER PTHR24032:SF27 12 262 2.3E-93 T 23-04-2016 RR42_RS15845 61c2682961266849558b700a609c1e23 284 SUPERFAMILY SSF56300 9 261 2.97E-48 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS15845 61c2682961266849558b700a609c1e23 284 Gene3D G3DSA:3.60.21.10 174 275 2.7E-45 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS15845 61c2682961266849558b700a609c1e23 284 Gene3D G3DSA:3.60.21.10 12 137 2.7E-45 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS15845 61c2682961266849558b700a609c1e23 284 PANTHER PTHR24032 12 262 2.3E-93 T 23-04-2016 RR42_RS15845 61c2682961266849558b700a609c1e23 284 Pfam PF00149 Calcineurin-like phosphoesterase 14 132 1.1E-7 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RR42_RS08705 fd23d8cb9bae387eb9200a7d99caf3e9 235 Pfam PF02678 Pirin 15 118 1.2E-19 T 23-04-2016 IPR003829 Pirin, N-terminal domain RR42_RS08705 fd23d8cb9bae387eb9200a7d99caf3e9 235 PANTHER PTHR13903:SF7 1 233 2.1E-47 T 23-04-2016 RR42_RS08705 fd23d8cb9bae387eb9200a7d99caf3e9 235 SUPERFAMILY SSF51182 1 233 2.21E-47 T 23-04-2016 IPR011051 RmlC-like cupin domain RR42_RS08705 fd23d8cb9bae387eb9200a7d99caf3e9 235 Gene3D G3DSA:2.60.120.10 12 232 2.0E-42 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS08705 fd23d8cb9bae387eb9200a7d99caf3e9 235 PIRSF PIRSF006232 12 233 4.1E-30 T 23-04-2016 IPR012093 Pirin RR42_RS08705 fd23d8cb9bae387eb9200a7d99caf3e9 235 PANTHER PTHR13903 1 233 2.1E-47 T 23-04-2016 IPR012093 Pirin RR42_RS15490 23381d654e1dfdb0e7a72360b9ac6e6c 155 Pfam PF03477 ATP cone domain 51 136 9.6E-13 T 23-04-2016 IPR005144 ATP-cone domain RR42_RS15490 23381d654e1dfdb0e7a72360b9ac6e6c 155 PANTHER PTHR30455:SF2 2 147 8.3E-61 T 23-04-2016 RR42_RS15490 23381d654e1dfdb0e7a72360b9ac6e6c 155 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 2.3E-57 T 23-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 RR42_RS15490 23381d654e1dfdb0e7a72360b9ac6e6c 155 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 154 81.857 T 23-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 RR42_RS15490 23381d654e1dfdb0e7a72360b9ac6e6c 155 PANTHER PTHR30455 2 147 8.3E-61 T 23-04-2016 RR42_RS05930 5c475b28641de4d444721ccf110e8a70 131 PANTHER PTHR11079:SF70 1 46 1.8E-12 T 23-04-2016 RR42_RS05930 5c475b28641de4d444721ccf110e8a70 131 SMART SM00363 11 73 2.0E-7 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RR42_RS05930 5c475b28641de4d444721ccf110e8a70 131 PIRSF PIRSF016821 8 131 2.4E-39 T 23-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 RR42_RS05930 5c475b28641de4d444721ccf110e8a70 131 SUPERFAMILY SSF55174 10 109 1.83E-27 T 23-04-2016 RR42_RS05930 5c475b28641de4d444721ccf110e8a70 131 Gene3D G3DSA:3.10.290.10 10 105 3.8E-33 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RR42_RS05930 5c475b28641de4d444721ccf110e8a70 131 PANTHER PTHR11079 1 46 1.8E-12 T 23-04-2016 RR42_RS05930 5c475b28641de4d444721ccf110e8a70 131 Pfam PF01479 S4 domain 12 57 1.5E-11 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RR42_RS12500 c2208285e5b8b4f29e4b397d852911eb 259 PANTHER PTHR11941 4 253 4.0E-54 T 23-04-2016 RR42_RS12500 c2208285e5b8b4f29e4b397d852911eb 259 Gene3D G3DSA:3.90.226.10 4 253 4.8E-52 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS12500 c2208285e5b8b4f29e4b397d852911eb 259 SUPERFAMILY SSF52096 3 254 5.39E-56 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS12500 c2208285e5b8b4f29e4b397d852911eb 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 253 2.6E-34 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RR42_RS00630 6698c4871bf4436c79e61ca1f684bd73 243 Gene3D G3DSA:3.90.1550.10 3 195 1.1E-65 T 23-04-2016 RR42_RS00630 6698c4871bf4436c79e61ca1f684bd73 243 Pfam PF03099 Biotin/lipoate A/B protein ligase family 63 163 2.0E-8 T 23-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 RR42_RS00630 6698c4871bf4436c79e61ca1f684bd73 243 Hamap MF_00013 Octanoyltransferase [lipB]. 3 226 36.429 T 23-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RR42_RS00630 6698c4871bf4436c79e61ca1f684bd73 243 PANTHER PTHR10993 4 179 1.5E-63 T 23-04-2016 RR42_RS00630 6698c4871bf4436c79e61ca1f684bd73 243 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 27 184 1.3E-54 T 23-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RR42_RS00630 6698c4871bf4436c79e61ca1f684bd73 243 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 3.0E-17 T 23-04-2016 RR42_RS00630 6698c4871bf4436c79e61ca1f684bd73 243 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 23-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RR42_RS00630 6698c4871bf4436c79e61ca1f684bd73 243 SUPERFAMILY SSF55681 3 194 2.98E-61 T 23-04-2016 RR42_RS09210 d0440c8cb19a2db4f63d42db457fa46c 202 PANTHER PTHR35008 1 202 6.6E-17 T 23-04-2016 RR42_RS09210 d0440c8cb19a2db4f63d42db457fa46c 202 SUPERFAMILY SSF46626 79 184 9.74E-26 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS09210 d0440c8cb19a2db4f63d42db457fa46c 202 PRINTS PR00605 Class IC cytochrome C signature 139 161 2.7E-6 T 23-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 RR42_RS09210 d0440c8cb19a2db4f63d42db457fa46c 202 PRINTS PR00605 Class IC cytochrome C signature 86 97 2.7E-6 T 23-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 RR42_RS09210 d0440c8cb19a2db4f63d42db457fa46c 202 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 79 160 3.1E-12 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS09210 d0440c8cb19a2db4f63d42db457fa46c 202 Gene3D G3DSA:1.10.760.10 79 186 5.6E-32 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS02275 8a4549048d8577e062e34aaa0c9303ab 397 Gene3D G3DSA:3.40.640.10 52 266 1.8E-60 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS02275 8a4549048d8577e062e34aaa0c9303ab 397 PANTHER PTHR11751 26 395 3.9E-97 T 23-04-2016 RR42_RS02275 8a4549048d8577e062e34aaa0c9303ab 397 SUPERFAMILY SSF53383 25 396 2.24E-101 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS02275 8a4549048d8577e062e34aaa0c9303ab 397 Pfam PF00155 Aminotransferase class I and II 50 391 7.4E-54 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RR42_RS02275 8a4549048d8577e062e34aaa0c9303ab 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 23-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 RR42_RS02275 8a4549048d8577e062e34aaa0c9303ab 397 Gene3D G3DSA:3.90.1150.10 267 395 1.3E-39 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS00460 3b51a37dac5f10e85ab810eb79f77542 271 PANTHER PTHR34108 1 133 7.4E-34 T 23-04-2016 RR42_RS00460 3b51a37dac5f10e85ab810eb79f77542 271 PANTHER PTHR34108 158 271 7.4E-34 T 23-04-2016 RR42_RS00460 3b51a37dac5f10e85ab810eb79f77542 271 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 9 103 1.6E-9 T 23-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 RR42_RS00460 3b51a37dac5f10e85ab810eb79f77542 271 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 8 269 24.711 T 23-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 RR42_RS00460 3b51a37dac5f10e85ab810eb79f77542 271 SUPERFAMILY SSF63848 163 269 2.48E-30 T 23-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 RR42_RS00460 3b51a37dac5f10e85ab810eb79f77542 271 PANTHER PTHR34108:SF1 1 133 7.4E-34 T 23-04-2016 RR42_RS00460 3b51a37dac5f10e85ab810eb79f77542 271 PANTHER PTHR34108:SF1 158 271 7.4E-34 T 23-04-2016 RR42_RS00460 3b51a37dac5f10e85ab810eb79f77542 271 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 9 268 1.5E-48 T 23-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 RR42_RS00460 3b51a37dac5f10e85ab810eb79f77542 271 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 166 265 2.9E-29 T 23-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 RR42_RS00460 3b51a37dac5f10e85ab810eb79f77542 271 Gene3D G3DSA:2.160.20.70 153 269 2.9E-37 T 23-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 RR42_RS03025 4ec0b82bf4a954f74afa2eee3807ba6d 695 PANTHER PTHR30509 1 250 4.3E-105 T 23-04-2016 RR42_RS03025 4ec0b82bf4a954f74afa2eee3807ba6d 695 PANTHER PTHR30509 315 648 4.3E-105 T 23-04-2016 RR42_RS03025 4ec0b82bf4a954f74afa2eee3807ba6d 695 Pfam PF04632 Fusaric acid resistance protein family 9 668 2.0E-203 T 23-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 RR42_RS03025 4ec0b82bf4a954f74afa2eee3807ba6d 695 PANTHER PTHR30509:SF1 1 250 4.3E-105 T 23-04-2016 RR42_RS03025 4ec0b82bf4a954f74afa2eee3807ba6d 695 PANTHER PTHR30509:SF1 315 648 4.3E-105 T 23-04-2016 RR42_RS20515 7bdc463d8e24b3a6c4178cda9ebfc648 690 Pfam PF02554 Carbon starvation protein CstA 32 408 1.2E-171 T 23-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 RR42_RS20515 7bdc463d8e24b3a6c4178cda9ebfc648 690 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 463 591 5.5E-35 T 23-04-2016 IPR025299 CstA, C-terminal domain RR42_RS20515 7bdc463d8e24b3a6c4178cda9ebfc648 690 PANTHER PTHR30252 6 690 0.0 T 23-04-2016 RR42_RS20515 7bdc463d8e24b3a6c4178cda9ebfc648 690 PANTHER PTHR30252:SF3 6 690 0.0 T 23-04-2016 RR42_RS13935 15141694be0721d7c348cc9c0b786d81 110 Gene3D G3DSA:2.10.70.10 77 110 2.8E-13 T 23-04-2016 RR42_RS13935 15141694be0721d7c348cc9c0b786d81 110 Pfam PF10636 Hemin uptake protein hemP 78 110 3.1E-15 T 23-04-2016 IPR019600 Hemin uptake protein HemP RR42_RS00215 d0820ff5f214631f89d8a7b7095ce2a8 429 SUPERFAMILY SSF75304 2 427 6.02E-113 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RR42_RS00215 d0820ff5f214631f89d8a7b7095ce2a8 429 Gene3D G3DSA:3.90.1300.10 2 427 3.9E-116 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RR42_RS00215 d0820ff5f214631f89d8a7b7095ce2a8 429 PANTHER PTHR11895 1 426 1.8E-110 T 23-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RR42_RS00215 d0820ff5f214631f89d8a7b7095ce2a8 429 Pfam PF01425 Amidase 26 418 3.1E-80 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RR42_RS15665 2dbe91a51094557979ad2dec6ed52ba0 107 PANTHER PTHR10657:SF12 1 107 1.2E-13 T 23-04-2016 RR42_RS15665 2dbe91a51094557979ad2dec6ed52ba0 107 Gene3D G3DSA:3.40.250.10 2 106 5.6E-30 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS15665 2dbe91a51094557979ad2dec6ed52ba0 107 SUPERFAMILY SSF52821 2 105 1.3E-29 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS15665 2dbe91a51094557979ad2dec6ed52ba0 107 PANTHER PTHR10657 1 107 1.2E-13 T 23-04-2016 RR42_RS15665 2dbe91a51094557979ad2dec6ed52ba0 107 SMART SM00450 7 102 7.8E-17 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS15665 2dbe91a51094557979ad2dec6ed52ba0 107 Pfam PF00581 Rhodanese-like domain 10 98 1.2E-13 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS14935 28a328fdd18b93ebf9c53cbe859ab9fc 599 PANTHER PTHR30625:SF3 133 599 4.7E-160 T 23-04-2016 RR42_RS14935 28a328fdd18b93ebf9c53cbe859ab9fc 599 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 190 334 1.3E-16 T 23-04-2016 RR42_RS14935 28a328fdd18b93ebf9c53cbe859ab9fc 599 PANTHER PTHR30625 133 599 4.7E-160 T 23-04-2016 RR42_RS14935 28a328fdd18b93ebf9c53cbe859ab9fc 599 Pfam PF01618 MotA/TolQ/ExbB proton channel family 463 570 2.2E-28 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RR42_RS14935 28a328fdd18b93ebf9c53cbe859ab9fc 599 SMART SM00560 200 334 0.007 T 23-04-2016 IPR006558 LamG-like jellyroll fold RR42_RS14935 28a328fdd18b93ebf9c53cbe859ab9fc 599 Gene3D G3DSA:2.60.120.200 200 338 4.0E-13 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RR42_RS14935 28a328fdd18b93ebf9c53cbe859ab9fc 599 SUPERFAMILY SSF49899 136 338 6.43E-19 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RR42_RS14935 28a328fdd18b93ebf9c53cbe859ab9fc 599 Pfam PF10102 Domain of unknown function (DUF2341) 72 137 1.3E-18 T 23-04-2016 IPR018765 Domain of unknown function DUF2341 RR42_RS01185 753f1d80aea0c07ea38793d6a023d1b9 418 Gene3D G3DSA:1.20.1250.20 220 405 4.7E-15 T 23-04-2016 RR42_RS01185 753f1d80aea0c07ea38793d6a023d1b9 418 PANTHER PTHR12778 13 401 1.2E-115 T 23-04-2016 RR42_RS01185 753f1d80aea0c07ea38793d6a023d1b9 418 Gene3D G3DSA:1.20.1250.20 11 201 3.6E-14 T 23-04-2016 RR42_RS01185 753f1d80aea0c07ea38793d6a023d1b9 418 SUPERFAMILY SSF103473 11 409 1.24E-41 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS01185 753f1d80aea0c07ea38793d6a023d1b9 418 Pfam PF07690 Major Facilitator Superfamily 22 367 1.6E-25 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS02590 c79d3286a46f4033ed0274749c50e140 244 SUPERFAMILY SSF52540 1 226 8.22E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02590 c79d3286a46f4033ed0274749c50e140 244 PANTHER PTHR24220 3 244 9.0E-179 T 23-04-2016 RR42_RS02590 c79d3286a46f4033ed0274749c50e140 244 SMART SM00382 26 213 3.7E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS02590 c79d3286a46f4033ed0274749c50e140 244 Pfam PF00005 ABC transporter 18 165 1.0E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS02590 c79d3286a46f4033ed0274749c50e140 244 PANTHER PTHR24220:SF317 3 244 9.0E-179 T 23-04-2016 IPR030206 Glutamate/aspartate transport ATP-binding protein GltL/AatP GO:0005524|GO:0006865|GO:0043190 RR42_RS02590 c79d3286a46f4033ed0274749c50e140 244 Gene3D G3DSA:3.40.50.300 1 226 5.1E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02590 c79d3286a46f4033ed0274749c50e140 244 PIRSF PIRSF039085 1 243 4.2E-100 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RR42_RS02590 c79d3286a46f4033ed0274749c50e140 244 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS20470 5ca10fac5b6fbf59a5224ca06e0dbd9e 171 Hamap MF_00163 Peptide deformylase [def]. 2 163 29.342 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RR42_RS20470 5ca10fac5b6fbf59a5224ca06e0dbd9e 171 PANTHER PTHR10458 1 171 3.0E-85 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RR42_RS20470 5ca10fac5b6fbf59a5224ca06e0dbd9e 171 PIRSF PIRSF004749 1 171 3.4E-56 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RR42_RS20470 5ca10fac5b6fbf59a5224ca06e0dbd9e 171 SUPERFAMILY SSF56420 1 162 4.06E-61 T 23-04-2016 IPR023635 Peptide deformylase RR42_RS20470 5ca10fac5b6fbf59a5224ca06e0dbd9e 171 Gene3D G3DSA:3.90.45.10 5 167 2.2E-64 T 23-04-2016 IPR023635 Peptide deformylase RR42_RS20470 5ca10fac5b6fbf59a5224ca06e0dbd9e 171 PANTHER PTHR10458:SF10 1 171 3.0E-85 T 23-04-2016 RR42_RS20470 5ca10fac5b6fbf59a5224ca06e0dbd9e 171 PRINTS PR01576 Peptide deformylase signature 90 101 4.0E-36 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RR42_RS20470 5ca10fac5b6fbf59a5224ca06e0dbd9e 171 PRINTS PR01576 Peptide deformylase signature 102 120 4.0E-36 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RR42_RS20470 5ca10fac5b6fbf59a5224ca06e0dbd9e 171 PRINTS PR01576 Peptide deformylase signature 121 150 4.0E-36 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RR42_RS20470 5ca10fac5b6fbf59a5224ca06e0dbd9e 171 PRINTS PR01576 Peptide deformylase signature 33 62 4.0E-36 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RR42_RS20470 5ca10fac5b6fbf59a5224ca06e0dbd9e 171 Pfam PF01327 Polypeptide deformylase 5 152 7.3E-50 T 23-04-2016 IPR023635 Peptide deformylase RR42_RS20470 5ca10fac5b6fbf59a5224ca06e0dbd9e 171 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 160 6.0E-56 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RR42_RS24155 50a71aa387f6dd2a7875f4d99cf997e1 380 Gene3D G3DSA:1.10.10.10 2 71 1.5E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS24155 50a71aa387f6dd2a7875f4d99cf997e1 380 Gene3D G3DSA:3.30.420.40 72 218 1.6E-32 T 23-04-2016 RR42_RS24155 50a71aa387f6dd2a7875f4d99cf997e1 380 Pfam PF00480 ROK family 77 378 2.3E-20 T 23-04-2016 IPR000600 ROK family RR42_RS24155 50a71aa387f6dd2a7875f4d99cf997e1 380 SUPERFAMILY SSF46785 3 66 8.03E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS24155 50a71aa387f6dd2a7875f4d99cf997e1 380 PANTHER PTHR18964 52 380 1.8E-25 T 23-04-2016 RR42_RS24155 50a71aa387f6dd2a7875f4d99cf997e1 380 SUPERFAMILY SSF53067 77 379 6.48E-36 T 23-04-2016 RR42_RS24155 50a71aa387f6dd2a7875f4d99cf997e1 380 PANTHER PTHR18964:SF108 52 380 1.8E-25 T 23-04-2016 RR42_RS24155 50a71aa387f6dd2a7875f4d99cf997e1 380 Gene3D G3DSA:3.30.420.40 219 362 6.3E-21 T 23-04-2016 RR42_RS03575 479acbfd6e1c2bcf739baa60ccf7af7b 447 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 20 445 2.0E-146 T 23-04-2016 IPR010263 Type VI secretion protein, VC_A0114 RR42_RS03575 479acbfd6e1c2bcf739baa60ccf7af7b 447 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 446 2.9E-145 T 23-04-2016 IPR010263 Type VI secretion protein, VC_A0114 RR42_RS03575 479acbfd6e1c2bcf739baa60ccf7af7b 447 PANTHER PTHR35566:SF2 1 446 1.0E-232 T 23-04-2016 RR42_RS03575 479acbfd6e1c2bcf739baa60ccf7af7b 447 PANTHER PTHR35566 1 446 1.0E-232 T 23-04-2016 RR42_RS02440 6f0484aa58bf2e084396e8b3dfc7222b 232 PANTHER PTHR31876 13 226 1.6E-58 T 23-04-2016 RR42_RS02440 6f0484aa58bf2e084396e8b3dfc7222b 232 Pfam PF04367 Protein of unknown function (DUF502) 64 169 1.3E-37 T 23-04-2016 IPR007462 Protein of unknown function DUF502 RR42_RS02440 6f0484aa58bf2e084396e8b3dfc7222b 232 PANTHER PTHR31876:SF1 13 226 1.6E-58 T 23-04-2016 RR42_RS16465 80a51317d9372e8721108db466c6387c 245 SUPERFAMILY SSF51735 4 237 9.8E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS16465 80a51317d9372e8721108db466c6387c 245 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 239 1.9E-14 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RR42_RS16465 80a51317d9372e8721108db466c6387c 245 PANTHER PTHR10366 4 222 3.2E-34 T 23-04-2016 RR42_RS16465 80a51317d9372e8721108db466c6387c 245 PANTHER PTHR10366:SF340 4 222 3.2E-34 T 23-04-2016 RR42_RS16465 80a51317d9372e8721108db466c6387c 245 Gene3D G3DSA:3.40.50.720 3 220 9.1E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS04285 aacaf41344f0055f6a7e882950d44c6f 175 Pfam PF00719 Inorganic pyrophosphatase 18 173 1.8E-49 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RR42_RS04285 aacaf41344f0055f6a7e882950d44c6f 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RR42_RS04285 aacaf41344f0055f6a7e882950d44c6f 175 PANTHER PTHR10286 6 166 3.2E-66 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RR42_RS04285 aacaf41344f0055f6a7e882950d44c6f 175 Gene3D G3DSA:3.90.80.10 4 174 5.0E-57 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RR42_RS04285 aacaf41344f0055f6a7e882950d44c6f 175 SUPERFAMILY SSF50324 6 174 4.97E-64 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RR42_RS04285 aacaf41344f0055f6a7e882950d44c6f 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 35.136 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RR42_RS18970 2944a262d803888e33fd6ece3102a5d2 273 PANTHER PTHR24220 10 259 2.5E-140 T 23-04-2016 RR42_RS18970 2944a262d803888e33fd6ece3102a5d2 273 SUPERFAMILY SSF52540 8 238 8.37E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18970 2944a262d803888e33fd6ece3102a5d2 273 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS18970 2944a262d803888e33fd6ece3102a5d2 273 Gene3D G3DSA:3.40.50.300 7 239 1.0E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18970 2944a262d803888e33fd6ece3102a5d2 273 Pfam PF00005 ABC transporter 26 175 1.0E-26 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS18970 2944a262d803888e33fd6ece3102a5d2 273 SMART SM00382 35 231 3.4E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS18970 2944a262d803888e33fd6ece3102a5d2 273 PANTHER PTHR24220:SF368 10 259 2.5E-140 T 23-04-2016 RR42_RS19980 aa8a39d9008c421978ef495d71897119 338 SUPERFAMILY SSF53850 31 278 4.83E-38 T 23-04-2016 RR42_RS19980 aa8a39d9008c421978ef495d71897119 338 Pfam PF09084 NMT1/THI5 like 51 262 2.1E-23 T 23-04-2016 IPR015168 SsuA/THI5-like RR42_RS19980 aa8a39d9008c421978ef495d71897119 338 Gene3D G3DSA:3.40.190.10 116 249 9.4E-17 T 23-04-2016 RR42_RS19980 aa8a39d9008c421978ef495d71897119 338 PANTHER PTHR30024:SF8 5 285 1.5E-32 T 23-04-2016 RR42_RS19980 aa8a39d9008c421978ef495d71897119 338 PANTHER PTHR30024 5 285 1.5E-32 T 23-04-2016 RR42_RS19600 82dd78ea84606063b54161c9291bce64 297 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 4 250 7.4E-53 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RR42_RS19600 82dd78ea84606063b54161c9291bce64 297 PANTHER PTHR30096 1 286 8.6E-90 T 23-04-2016 RR42_RS19600 82dd78ea84606063b54161c9291bce64 297 PIRSF PIRSF006157 1 284 9.6E-83 T 23-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 RR42_RS19600 82dd78ea84606063b54161c9291bce64 297 Gene3D G3DSA:3.40.830.10 2 283 1.6E-85 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RR42_RS19600 82dd78ea84606063b54161c9291bce64 297 PANTHER PTHR30096:SF0 1 286 8.6E-90 T 23-04-2016 RR42_RS19600 82dd78ea84606063b54161c9291bce64 297 SUPERFAMILY SSF53213 1 282 1.7E-78 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RR42_RS35385 2bf07824589a12d36dfbf6c8a07198be 77 Pfam PF02397 Bacterial sugar transferase 1 76 1.8E-13 T 23-04-2016 IPR003362 Bacterial sugar transferase RR42_RS35385 2bf07824589a12d36dfbf6c8a07198be 77 PANTHER PTHR30576 1 77 1.8E-21 T 23-04-2016 RR42_RS35385 2bf07824589a12d36dfbf6c8a07198be 77 PANTHER PTHR30576:SF0 1 77 1.8E-21 T 23-04-2016 RR42_RS15415 70957ae760d11060a6f4ddf721c601e6 126 Gene3D G3DSA:1.20.1250.20 13 102 6.1E-4 T 23-04-2016 RR42_RS15415 70957ae760d11060a6f4ddf721c601e6 126 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 13 125 4.2E-22 T 23-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III RR42_RS01440 03072aacc122296193583fe5cf44feab 137 Pfam PF02152 Dihydroneopterin aldolase 19 127 1.0E-25 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RR42_RS01440 03072aacc122296193583fe5cf44feab 137 Gene3D G3DSA:3.30.1130.10 17 128 4.0E-32 T 23-04-2016 RR42_RS01440 03072aacc122296193583fe5cf44feab 137 SUPERFAMILY SSF55620 14 128 7.78E-28 T 23-04-2016 RR42_RS01440 03072aacc122296193583fe5cf44feab 137 TIGRFAM TIGR00526 folB_dom: FolB domain 19 127 7.6E-15 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RR42_RS01440 03072aacc122296193583fe5cf44feab 137 SMART SM00905 18 129 2.7E-29 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RR42_RS08145 a9fd57f6d2b92a2f2f99b2e3a7019219 70 SUPERFAMILY SSF47413 13 65 3.1E-12 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS08145 a9fd57f6d2b92a2f2f99b2e3a7019219 70 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 13 67 2.5E-22 T 23-04-2016 IPR031856 Putative bacterial antitoxin YdaS RR42_RS08145 a9fd57f6d2b92a2f2f99b2e3a7019219 70 Gene3D G3DSA:1.10.260.40 5 69 2.6E-22 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS09915 76aadeec6e0a75ac08b21b4d0ca68263 421 Gene3D G3DSA:1.20.1250.20 8 191 1.7E-38 T 23-04-2016 RR42_RS09915 76aadeec6e0a75ac08b21b4d0ca68263 421 PANTHER PTHR23508 10 375 2.2E-71 T 23-04-2016 RR42_RS09915 76aadeec6e0a75ac08b21b4d0ca68263 421 SUPERFAMILY SSF103473 7 402 2.35E-75 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS09915 76aadeec6e0a75ac08b21b4d0ca68263 421 Pfam PF07690 Major Facilitator Superfamily 17 359 4.4E-46 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS09915 76aadeec6e0a75ac08b21b4d0ca68263 421 Gene3D G3DSA:1.20.1250.20 222 395 1.4E-17 T 23-04-2016 RR42_RS09915 76aadeec6e0a75ac08b21b4d0ca68263 421 PANTHER PTHR23508:SF18 10 375 2.2E-71 T 23-04-2016 RR42_RS04345 a2ebcb02a10c35d2d8595c1705a797ec 553 SUPERFAMILY SSF161098 9 263 1.14E-45 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS04345 a2ebcb02a10c35d2d8595c1705a797ec 553 Gene3D G3DSA:1.10.3720.10 294 548 1.0E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS04345 a2ebcb02a10c35d2d8595c1705a797ec 553 Gene3D G3DSA:1.10.3720.10 16 270 2.8E-37 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS04345 a2ebcb02a10c35d2d8595c1705a797ec 553 SUPERFAMILY SSF161098 286 547 3.4E-32 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS04345 a2ebcb02a10c35d2d8595c1705a797ec 553 PANTHER PTHR30183 414 550 4.2E-206 T 23-04-2016 RR42_RS04345 a2ebcb02a10c35d2d8595c1705a797ec 553 PANTHER PTHR30183 1 397 4.2E-206 T 23-04-2016 RR42_RS04345 a2ebcb02a10c35d2d8595c1705a797ec 553 PANTHER PTHR30183:SF2 414 550 4.2E-206 T 23-04-2016 RR42_RS04345 a2ebcb02a10c35d2d8595c1705a797ec 553 PANTHER PTHR30183:SF2 1 397 4.2E-206 T 23-04-2016 RR42_RS04345 a2ebcb02a10c35d2d8595c1705a797ec 553 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 356 541 7.8E-7 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS04345 a2ebcb02a10c35d2d8595c1705a797ec 553 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 261 5.5E-11 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS08775 b0cbc4582f49770beb0a392866d99694 317 PANTHER PTHR30217 2 204 9.0E-139 T 23-04-2016 RR42_RS08775 b0cbc4582f49770beb0a392866d99694 317 PANTHER PTHR30217 226 317 9.0E-139 T 23-04-2016 RR42_RS08775 b0cbc4582f49770beb0a392866d99694 317 ProSitePatterns PS01276 Peptidase family U32 signature. 147 165 - T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RR42_RS08775 b0cbc4582f49770beb0a392866d99694 317 Pfam PF01136 Peptidase family U32 63 316 4.0E-66 T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RR42_RS08775 b0cbc4582f49770beb0a392866d99694 317 PANTHER PTHR30217:SF3 226 317 9.0E-139 T 23-04-2016 RR42_RS08775 b0cbc4582f49770beb0a392866d99694 317 PANTHER PTHR30217:SF3 2 204 9.0E-139 T 23-04-2016 RR42_RS09000 422cc18cfc55b5cc4e19187d6c0ccac5 83 SUPERFAMILY SSF160272 1 72 2.75E-7 T 23-04-2016 IPR009962 Protein of unknown function DUF1488 RR42_RS09000 422cc18cfc55b5cc4e19187d6c0ccac5 83 Pfam PF07369 Protein of unknown function (DUF1488) 4 82 1.8E-19 T 23-04-2016 IPR009962 Protein of unknown function DUF1488 RR42_RS12215 7e038adeb00cac82ab84b032e34ba828 165 PANTHER PTHR33254 1 163 2.2E-78 T 23-04-2016 RR42_RS12215 7e038adeb00cac82ab84b032e34ba828 165 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 158 1.5E-64 T 23-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 RR42_RS12215 7e038adeb00cac82ab84b032e34ba828 165 Gene3D G3DSA:3.50.30.40 2 161 8.0E-50 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein RR42_RS12215 7e038adeb00cac82ab84b032e34ba828 165 Pfam PF03737 Demethylmenaquinone methyltransferase 5 158 7.3E-43 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein RR42_RS12215 7e038adeb00cac82ab84b032e34ba828 165 SUPERFAMILY SSF89562 1 163 1.24E-46 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein RR42_RS12215 7e038adeb00cac82ab84b032e34ba828 165 PANTHER PTHR33254:SF4 1 163 2.2E-78 T 23-04-2016 RR42_RS01010 6560ac70cf9b0fece13a0fd238f9f9bf 207 PANTHER PTHR11260:SF253 2 200 3.1E-67 T 23-04-2016 RR42_RS01010 6560ac70cf9b0fece13a0fd238f9f9bf 207 PANTHER PTHR11260 2 200 3.1E-67 T 23-04-2016 RR42_RS01010 6560ac70cf9b0fece13a0fd238f9f9bf 207 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 79 6.4E-14 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RR42_RS01010 6560ac70cf9b0fece13a0fd238f9f9bf 207 SUPERFAMILY SSF47616 79 201 7.24E-29 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS01010 6560ac70cf9b0fece13a0fd238f9f9bf 207 Gene3D G3DSA:3.40.30.10 2 92 7.6E-23 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS01010 6560ac70cf9b0fece13a0fd238f9f9bf 207 Gene3D G3DSA:1.20.1050.10 93 200 4.1E-33 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS01010 6560ac70cf9b0fece13a0fd238f9f9bf 207 Pfam PF00043 Glutathione S-transferase, C-terminal domain 110 196 1.3E-5 T 23-04-2016 IPR004046 Glutathione S-transferase, C-terminal RR42_RS01010 6560ac70cf9b0fece13a0fd238f9f9bf 207 SUPERFAMILY SSF52833 1 84 6.87E-21 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS09630 3d8b0cfe3ed1b6f596d37b475d1d9bc6 111 PANTHER PTHR35893 3 107 1.5E-13 T 23-04-2016 RR42_RS09630 3d8b0cfe3ed1b6f596d37b475d1d9bc6 111 Pfam PF05957 Bacterial protein of unknown function (DUF883) 15 104 4.4E-21 T 23-04-2016 IPR010279 Protein of unknown function DUF883, ElaB RR42_RS09415 4176cf29ffbfbe26c384537fa57c2342 417 SUPERFAMILY SSF55031 221 337 1.52E-15 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS09415 4176cf29ffbfbe26c384537fa57c2342 417 Pfam PF01546 Peptidase family M20/M25/M40 78 414 1.2E-27 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RR42_RS09415 4176cf29ffbfbe26c384537fa57c2342 417 SUPERFAMILY SSF53187 22 226 2.28E-58 T 23-04-2016 RR42_RS09415 4176cf29ffbfbe26c384537fa57c2342 417 SUPERFAMILY SSF53187 345 417 2.28E-58 T 23-04-2016 RR42_RS09415 4176cf29ffbfbe26c384537fa57c2342 417 PIRSF PIRSF001235 5 417 1.4E-102 T 23-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 RR42_RS09415 4176cf29ffbfbe26c384537fa57c2342 417 Gene3D G3DSA:3.40.630.10 13 229 2.0E-71 T 23-04-2016 RR42_RS09415 4176cf29ffbfbe26c384537fa57c2342 417 Gene3D G3DSA:3.40.630.10 360 416 2.0E-71 T 23-04-2016 RR42_RS09415 4176cf29ffbfbe26c384537fa57c2342 417 Gene3D G3DSA:3.30.70.360 230 332 7.9E-26 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS09415 4176cf29ffbfbe26c384537fa57c2342 417 PANTHER PTHR32494 26 417 1.9E-92 T 23-04-2016 RR42_RS09415 4176cf29ffbfbe26c384537fa57c2342 417 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 25 415 7.0E-81 T 23-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 RR42_RS08935 7fd7ab08236abd0dbe398083f6895d4b 262 Gene3D G3DSA:3.10.50.40 94 230 6.0E-24 T 23-04-2016 RR42_RS08935 7fd7ab08236abd0dbe398083f6895d4b 262 SUPERFAMILY SSF54534 97 208 1.9E-18 T 23-04-2016 RR42_RS08935 7fd7ab08236abd0dbe398083f6895d4b 262 PANTHER PTHR10657 143 239 1.9E-12 T 23-04-2016 RR42_RS08935 7fd7ab08236abd0dbe398083f6895d4b 262 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 145 165 - T 23-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site RR42_RS08935 7fd7ab08236abd0dbe398083f6895d4b 262 Pfam PF00639 PPIC-type PPIASE domain 107 204 1.1E-15 T 23-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 RR42_RS08935 7fd7ab08236abd0dbe398083f6895d4b 262 PANTHER PTHR10657:SF11 143 239 1.9E-12 T 23-04-2016 RR42_RS18845 5b1deb92c5d107cf221f861405613c05 366 Gene3D G3DSA:2.40.160.10 21 366 8.5E-100 T 23-04-2016 IPR023614 Porin domain RR42_RS18845 5b1deb92c5d107cf221f861405613c05 366 Pfam PF13609 Gram-negative porin 7 332 2.3E-56 T 23-04-2016 RR42_RS18845 5b1deb92c5d107cf221f861405613c05 366 SUPERFAMILY SSF56935 21 366 4.88E-90 T 23-04-2016 RR42_RS18845 5b1deb92c5d107cf221f861405613c05 366 PRINTS PR00184 Neisseria sp. porin signature 304 328 2.8E-5 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RR42_RS18845 5b1deb92c5d107cf221f861405613c05 366 PRINTS PR00184 Neisseria sp. porin signature 55 80 2.8E-5 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RR42_RS18845 5b1deb92c5d107cf221f861405613c05 366 PANTHER PTHR34501 2 211 2.9E-15 T 23-04-2016 RR42_RS03105 49f258f6c010da0dd57072431e22c11d 231 Pfam PF03741 Integral membrane protein TerC family 16 189 3.3E-45 T 23-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 RR42_RS03105 49f258f6c010da0dd57072431e22c11d 231 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 13 190 3.9E-68 T 23-04-2016 IPR022301 Integral membrane protein YjbE RR42_RS03105 49f258f6c010da0dd57072431e22c11d 231 PANTHER PTHR30060 4 228 2.8E-35 T 23-04-2016 RR42_RS18250 03afa91bd41e7c4cd6665fbb01bbb0a7 258 Gene3D G3DSA:3.90.226.10 2 256 7.0E-99 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS18250 03afa91bd41e7c4cd6665fbb01bbb0a7 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 257 4.5E-81 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RR42_RS18250 03afa91bd41e7c4cd6665fbb01bbb0a7 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 23-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RR42_RS18250 03afa91bd41e7c4cd6665fbb01bbb0a7 258 SUPERFAMILY SSF52096 1 258 1.1E-89 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS18250 03afa91bd41e7c4cd6665fbb01bbb0a7 258 PANTHER PTHR11941:SF54 3 255 2.7E-120 T 23-04-2016 RR42_RS18250 03afa91bd41e7c4cd6665fbb01bbb0a7 258 PANTHER PTHR11941 3 255 2.7E-120 T 23-04-2016 RR42_RS09960 1ed3202232eff6c37dd9d484a0d61c3b 250 PANTHER PTHR14194 1 244 2.9E-85 T 23-04-2016 RR42_RS09960 1ed3202232eff6c37dd9d484a0d61c3b 250 Gene3D G3DSA:3.40.50.720 1 204 3.1E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS09960 1ed3202232eff6c37dd9d484a0d61c3b 250 PANTHER PTHR14194:SF69 1 244 2.9E-85 T 23-04-2016 RR42_RS09960 1ed3202232eff6c37dd9d484a0d61c3b 250 SUPERFAMILY SSF51735 1 211 1.32E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS09960 1ed3202232eff6c37dd9d484a0d61c3b 250 Pfam PF13460 NAD(P)H-binding 7 173 3.7E-8 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS01315 723a4845e2b39edd67c716d137c6fbcb 167 SUPERFAMILY SSF55729 1 138 3.43E-25 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS01315 723a4845e2b39edd67c716d137c6fbcb 167 Pfam PF00583 Acetyltransferase (GNAT) family 61 134 3.4E-12 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RR42_RS01315 723a4845e2b39edd67c716d137c6fbcb 167 Gene3D G3DSA:3.40.630.30 1 138 2.2E-25 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS01315 723a4845e2b39edd67c716d137c6fbcb 167 PANTHER PTHR23091 1 138 4.3E-16 T 23-04-2016 RR42_RS15915 fe4d079ccc3737bb45c876453f53ab49 201 SUPERFAMILY SSF88946 20 117 7.65E-24 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS15915 fe4d079ccc3737bb45c876453f53ab49 201 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 197 5.4E-29 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS15915 fe4d079ccc3737bb45c876453f53ab49 201 SUPERFAMILY SSF88659 116 199 3.55E-15 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS15915 fe4d079ccc3737bb45c876453f53ab49 201 PANTHER PTHR30173:SF31 11 198 1.9E-48 T 23-04-2016 RR42_RS15915 fe4d079ccc3737bb45c876453f53ab49 201 PANTHER PTHR30173 11 198 1.9E-48 T 23-04-2016 RR42_RS15915 fe4d079ccc3737bb45c876453f53ab49 201 Gene3D G3DSA:1.10.10.10 137 198 4.8E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS15915 fe4d079ccc3737bb45c876453f53ab49 201 Pfam PF08281 Sigma-70, region 4 141 193 1.4E-13 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS15915 fe4d079ccc3737bb45c876453f53ab49 201 Gene3D G3DSA:1.10.1740.10 21 117 1.7E-23 T 23-04-2016 RR42_RS15915 fe4d079ccc3737bb45c876453f53ab49 201 Pfam PF04542 Sigma-70 region 2 38 105 6.7E-15 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS13815 fed6ad91926560464575adb726565075 534 Gene3D G3DSA:3.50.50.60 23 293 1.7E-37 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS13815 fed6ad91926560464575adb726565075 534 PANTHER PTHR11985 10 526 3.5E-202 T 23-04-2016 RR42_RS13815 fed6ad91926560464575adb726565075 534 SUPERFAMILY SSF51905 25 352 2.59E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS13815 fed6ad91926560464575adb726565075 534 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 408 515 6.3E-15 T 23-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RR42_RS13815 fed6ad91926560464575adb726565075 534 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 39 49 2.5E-29 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RR42_RS13815 fed6ad91926560464575adb726565075 534 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 100 112 2.5E-29 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RR42_RS13815 fed6ad91926560464575adb726565075 534 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 375 387 2.5E-29 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RR42_RS13815 fed6ad91926560464575adb726565075 534 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 26 38 2.5E-29 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RR42_RS13815 fed6ad91926560464575adb726565075 534 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 344 350 2.5E-29 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RR42_RS13815 fed6ad91926560464575adb726565075 534 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 55 67 2.5E-29 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RR42_RS13815 fed6ad91926560464575adb726565075 534 Pfam PF01266 FAD dependent oxidoreductase 27 386 9.9E-51 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RR42_RS13815 fed6ad91926560464575adb726565075 534 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 380 390 - T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RR42_RS13895 b76896a677c2544408abbf136b7fe01f 250 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 229 2.3E-18 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS13895 b76896a677c2544408abbf136b7fe01f 250 SMART SM00448 3 114 1.3E-38 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS13895 b76896a677c2544408abbf136b7fe01f 250 SUPERFAMILY SSF52172 2 127 1.57E-37 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS13895 b76896a677c2544408abbf136b7fe01f 250 SUPERFAMILY SSF46894 130 230 5.39E-24 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS13895 b76896a677c2544408abbf136b7fe01f 250 SMART SM00862 153 229 1.1E-15 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS13895 b76896a677c2544408abbf136b7fe01f 250 Gene3D G3DSA:3.40.50.2300 3 123 3.4E-37 T 23-04-2016 RR42_RS13895 b76896a677c2544408abbf136b7fe01f 250 Pfam PF00072 Response regulator receiver domain 5 114 6.5E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS13895 b76896a677c2544408abbf136b7fe01f 250 Gene3D G3DSA:1.10.10.10 130 231 2.1E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS13895 b76896a677c2544408abbf136b7fe01f 250 PANTHER PTHR26402 3 231 4.8E-74 T 23-04-2016 RR42_RS13895 b76896a677c2544408abbf136b7fe01f 250 PANTHER PTHR26402:SF292 3 231 4.8E-74 T 23-04-2016 RR42_RS10115 67974ff21f38bcceee223762a745297e 335 Gene3D G3DSA:3.40.50.2000 144 306 1.3E-9 T 23-04-2016 RR42_RS10115 67974ff21f38bcceee223762a745297e 335 PANTHER PTHR12526:SF397 152 331 4.9E-12 T 23-04-2016 RR42_RS10115 67974ff21f38bcceee223762a745297e 335 PANTHER PTHR12526 152 331 4.9E-12 T 23-04-2016 RR42_RS10115 67974ff21f38bcceee223762a745297e 335 TIGRFAM TIGR04348 TIGR04348: putative glycosyltransferase, TIGR04348 family 8 325 5.1E-132 T 23-04-2016 IPR027627 Putative glycosyltransferase RR42_RS10115 67974ff21f38bcceee223762a745297e 335 SUPERFAMILY SSF53756 9 313 6.98E-25 T 23-04-2016 RR42_RS10115 67974ff21f38bcceee223762a745297e 335 Pfam PF00534 Glycosyl transferases group 1 149 308 3.5E-11 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 RR42_RS12595 680c7273e7bac4d95272f784bcb5d0b1 92 PRINTS PR00974 Ribosomal protein S18 family signature 44 54 2.3E-14 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS12595 680c7273e7bac4d95272f784bcb5d0b1 92 PRINTS PR00974 Ribosomal protein S18 family signature 54 61 2.3E-14 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS12595 680c7273e7bac4d95272f784bcb5d0b1 92 PRINTS PR00974 Ribosomal protein S18 family signature 62 76 2.3E-14 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS12595 680c7273e7bac4d95272f784bcb5d0b1 92 PRINTS PR00974 Ribosomal protein S18 family signature 76 86 2.3E-14 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS12595 680c7273e7bac4d95272f784bcb5d0b1 92 TIGRFAM TIGR00165 S18: ribosomal protein bS18 21 88 9.6E-32 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS12595 680c7273e7bac4d95272f784bcb5d0b1 92 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 37 87 2.0E-23 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS12595 680c7273e7bac4d95272f784bcb5d0b1 92 ProSitePatterns PS00057 Ribosomal protein S18 signature. 37 60 - T 23-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS12595 680c7273e7bac4d95272f784bcb5d0b1 92 SUPERFAMILY SSF46911 15 88 1.11E-26 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS12595 680c7273e7bac4d95272f784bcb5d0b1 92 PANTHER PTHR13479 20 88 4.4E-22 T 23-04-2016 RR42_RS12595 680c7273e7bac4d95272f784bcb5d0b1 92 Gene3D G3DSA:4.10.640.10 24 90 1.5E-28 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS12595 680c7273e7bac4d95272f784bcb5d0b1 92 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 8 89 19.47 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS12595 680c7273e7bac4d95272f784bcb5d0b1 92 Pfam PF01084 Ribosomal protein S18 35 84 5.9E-22 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS13555 d49d8a6d891e6e452075b1ba2b123101 796 SUPERFAMILY SSF51905 254 362 4.17E-37 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS13555 d49d8a6d891e6e452075b1ba2b123101 796 SUPERFAMILY SSF51905 1 152 4.17E-37 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS13555 d49d8a6d891e6e452075b1ba2b123101 796 SUPERFAMILY SSF51395 419 774 3.66E-116 T 23-04-2016 RR42_RS13555 d49d8a6d891e6e452075b1ba2b123101 796 PANTHER PTHR22893 406 759 3.7E-213 T 23-04-2016 RR42_RS13555 d49d8a6d891e6e452075b1ba2b123101 796 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 1.9E-9 T 23-04-2016 RR42_RS13555 d49d8a6d891e6e452075b1ba2b123101 796 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 276 291 1.9E-9 T 23-04-2016 RR42_RS13555 d49d8a6d891e6e452075b1ba2b123101 796 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 291 307 1.9E-9 T 23-04-2016 RR42_RS13555 d49d8a6d891e6e452075b1ba2b123101 796 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 131 146 1.9E-9 T 23-04-2016 RR42_RS13555 d49d8a6d891e6e452075b1ba2b123101 796 PANTHER PTHR22893:SF29 406 759 3.7E-213 T 23-04-2016 RR42_RS13555 d49d8a6d891e6e452075b1ba2b123101 796 Gene3D G3DSA:3.50.50.60 1 42 1.0E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS13555 d49d8a6d891e6e452075b1ba2b123101 796 Gene3D G3DSA:3.50.50.60 96 168 1.0E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS13555 d49d8a6d891e6e452075b1ba2b123101 796 Gene3D G3DSA:3.50.50.60 263 394 1.0E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS13555 d49d8a6d891e6e452075b1ba2b123101 796 Gene3D G3DSA:3.20.20.70 419 757 5.0E-123 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS13555 d49d8a6d891e6e452075b1ba2b123101 796 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 422 751 9.9E-64 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RR42_RS15375 ad3e2c1abebf274979a13ccce9ea58e9 160 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 9.9E-22 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RR42_RS15375 ad3e2c1abebf274979a13ccce9ea58e9 160 PANTHER PTHR30154 1 146 6.6E-64 T 23-04-2016 RR42_RS15375 ad3e2c1abebf274979a13ccce9ea58e9 160 Gene3D G3DSA:3.30.70.920 57 149 1.4E-26 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RR42_RS15375 ad3e2c1abebf274979a13ccce9ea58e9 160 SUPERFAMILY SSF54909 64 148 3.22E-20 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RR42_RS15375 ad3e2c1abebf274979a13ccce9ea58e9 160 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 23-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RR42_RS15375 ad3e2c1abebf274979a13ccce9ea58e9 160 Gene3D G3DSA:1.10.10.10 4 54 5.8E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS15375 ad3e2c1abebf274979a13ccce9ea58e9 160 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 49 7.5E-20 T 23-04-2016 RR42_RS15375 ad3e2c1abebf274979a13ccce9ea58e9 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.2E-14 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS15375 ad3e2c1abebf274979a13ccce9ea58e9 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.2E-14 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS15375 ad3e2c1abebf274979a13ccce9ea58e9 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.2E-14 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS15375 ad3e2c1abebf274979a13ccce9ea58e9 160 SMART SM00344 3 112 5.3E-38 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RR42_RS15375 ad3e2c1abebf274979a13ccce9ea58e9 160 SUPERFAMILY SSF46785 2 62 1.32E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS15375 ad3e2c1abebf274979a13ccce9ea58e9 160 PANTHER PTHR30154:SF28 1 146 6.6E-64 T 23-04-2016 RR42_RS19705 1f9a4aacd89e76290488d53079336d12 454 PANTHER PTHR19372:SF2 87 451 8.0E-78 T 23-04-2016 RR42_RS19705 1f9a4aacd89e76290488d53079336d12 454 Gene3D G3DSA:3.90.420.10 94 328 7.2E-59 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RR42_RS19705 1f9a4aacd89e76290488d53079336d12 454 Pfam PF00174 Oxidoreductase molybdopterin binding domain 144 301 4.9E-42 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RR42_RS19705 1f9a4aacd89e76290488d53079336d12 454 SUPERFAMILY SSF56524 91 330 3.92E-66 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RR42_RS19705 1f9a4aacd89e76290488d53079336d12 454 Gene3D G3DSA:2.60.40.650 329 442 2.7E-27 T 23-04-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 RR42_RS19705 1f9a4aacd89e76290488d53079336d12 454 TIGRFAM TIGR04555 sulfite_DH_soxC: sulfite dehydrogenase 38 451 4.0E-187 T 23-04-2016 IPR030835 Sulfite dehydrogenase SoxC RR42_RS19705 1f9a4aacd89e76290488d53079336d12 454 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 328 438 7.0E-18 T 23-04-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 RR42_RS19705 1f9a4aacd89e76290488d53079336d12 454 PRINTS PR00407 Eukaryotic molybdopterin domain signature 285 298 1.9E-15 T 23-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 RR42_RS19705 1f9a4aacd89e76290488d53079336d12 454 PRINTS PR00407 Eukaryotic molybdopterin domain signature 350 364 1.9E-15 T 23-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 RR42_RS19705 1f9a4aacd89e76290488d53079336d12 454 PRINTS PR00407 Eukaryotic molybdopterin domain signature 269 282 1.9E-15 T 23-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 RR42_RS19705 1f9a4aacd89e76290488d53079336d12 454 PRINTS PR00407 Eukaryotic molybdopterin domain signature 129 145 1.9E-15 T 23-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 RR42_RS19705 1f9a4aacd89e76290488d53079336d12 454 PRINTS PR00407 Eukaryotic molybdopterin domain signature 252 268 1.9E-15 T 23-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 RR42_RS19705 1f9a4aacd89e76290488d53079336d12 454 PRINTS PR00407 Eukaryotic molybdopterin domain signature 407 419 1.9E-15 T 23-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 RR42_RS19705 1f9a4aacd89e76290488d53079336d12 454 SUPERFAMILY SSF81296 328 442 3.92E-31 T 23-04-2016 IPR014756 Immunoglobulin E-set RR42_RS19705 1f9a4aacd89e76290488d53079336d12 454 PANTHER PTHR19372 87 451 8.0E-78 T 23-04-2016 RR42_RS01990 a1de059874bec173dc37fd000f24f7bc 180 PIRSF PIRSF004553 1 179 5.7E-42 T 23-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RR42_RS01990 a1de059874bec173dc37fd000f24f7bc 180 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 1 176 1.5E-43 T 23-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RR42_RS01990 a1de059874bec173dc37fd000f24f7bc 180 PANTHER PTHR18895 1 176 5.5E-36 T 23-04-2016 RR42_RS01990 a1de059874bec173dc37fd000f24f7bc 180 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 112 118 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RR42_RS01990 a1de059874bec173dc37fd000f24f7bc 180 Pfam PF03602 Conserved hypothetical protein 95 1 175 1.2E-47 T 23-04-2016 RR42_RS01990 a1de059874bec173dc37fd000f24f7bc 180 PANTHER PTHR18895:SF60 1 176 5.5E-36 T 23-04-2016 RR42_RS01990 a1de059874bec173dc37fd000f24f7bc 180 SUPERFAMILY SSF53335 1 176 1.03E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS01990 a1de059874bec173dc37fd000f24f7bc 180 Gene3D G3DSA:3.40.50.150 1 177 9.2E-58 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS03250 2913710141d424e71514c3496c41b327 201 PRINTS PR00598 Bacterial regulatory protein MarR family signature 155 175 1.3E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS03250 2913710141d424e71514c3496c41b327 201 PRINTS PR00598 Bacterial regulatory protein MarR family signature 106 121 1.3E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS03250 2913710141d424e71514c3496c41b327 201 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 1.3E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS03250 2913710141d424e71514c3496c41b327 201 PRINTS PR00598 Bacterial regulatory protein MarR family signature 125 141 1.3E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS03250 2913710141d424e71514c3496c41b327 201 Pfam PF01047 MarR family 72 129 1.0E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS03250 2913710141d424e71514c3496c41b327 201 SUPERFAMILY SSF46785 39 176 1.78E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS03250 2913710141d424e71514c3496c41b327 201 PANTHER PTHR33164 17 189 1.6E-29 T 23-04-2016 RR42_RS03250 2913710141d424e71514c3496c41b327 201 SMART SM00347 65 165 3.3E-17 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS03250 2913710141d424e71514c3496c41b327 201 Gene3D G3DSA:1.10.10.10 43 175 9.3E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS05110 734a4d84cac520477c7e6b5814b3462d 489 TIGRFAM TIGR03216 OH_muco_semi_DH: 2-hydroxymuconic semialdehyde dehydrogenase 9 489 3.3E-257 T 23-04-2016 IPR017628 2-hydroxymuconic semialdehyde dehydrogenase GO:0016620|GO:0055114 RR42_RS05110 734a4d84cac520477c7e6b5814b3462d 489 Gene3D G3DSA:3.40.309.10 271 460 2.9E-67 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RR42_RS05110 734a4d84cac520477c7e6b5814b3462d 489 PANTHER PTHR11699:SF213 9 489 9.5E-218 T 23-04-2016 RR42_RS05110 734a4d84cac520477c7e6b5814b3462d 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 284 295 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RR42_RS05110 734a4d84cac520477c7e6b5814b3462d 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 256 263 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RR42_RS05110 734a4d84cac520477c7e6b5814b3462d 489 SUPERFAMILY SSF53720 6 488 2.62E-160 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RR42_RS05110 734a4d84cac520477c7e6b5814b3462d 489 PANTHER PTHR11699 9 489 9.5E-218 T 23-04-2016 RR42_RS05110 734a4d84cac520477c7e6b5814b3462d 489 Gene3D G3DSA:3.40.605.10 10 270 7.5E-91 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RR42_RS05110 734a4d84cac520477c7e6b5814b3462d 489 Pfam PF00171 Aldehyde dehydrogenase family 20 484 9.3E-160 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RR42_RS00265 f3715f08b701b9530d2a0af50349c27c 242 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS00265 f3715f08b701b9530d2a0af50349c27c 242 PANTHER PTHR24220 6 238 2.8E-118 T 23-04-2016 RR42_RS00265 f3715f08b701b9530d2a0af50349c27c 242 SUPERFAMILY SSF52540 4 233 2.93E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS00265 f3715f08b701b9530d2a0af50349c27c 242 SMART SM00382 29 217 6.1E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS00265 f3715f08b701b9530d2a0af50349c27c 242 PANTHER PTHR24220:SF447 6 238 2.8E-118 T 23-04-2016 RR42_RS00265 f3715f08b701b9530d2a0af50349c27c 242 Gene3D G3DSA:3.40.50.300 3 237 1.9E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS00265 f3715f08b701b9530d2a0af50349c27c 242 Pfam PF00005 ABC transporter 20 168 7.9E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS00265 f3715f08b701b9530d2a0af50349c27c 242 PIRSF PIRSF039085 1 242 2.8E-101 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RR42_RS01845 a8693d3595994ab6c0a77a12304c72f3 338 PIRSF PIRSF000114 1 338 3.8E-92 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RR42_RS01845 a8693d3595994ab6c0a77a12304c72f3 338 Gene3D G3DSA:3.40.50.720 1 190 9.5E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS01845 a8693d3595994ab6c0a77a12304c72f3 338 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 195 216 - T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RR42_RS01845 a8693d3595994ab6c0a77a12304c72f3 338 SUPERFAMILY SSF48179 186 338 7.82E-53 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RR42_RS01845 a8693d3595994ab6c0a77a12304c72f3 338 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 187 327 2.6E-48 T 23-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RR42_RS01845 a8693d3595994ab6c0a77a12304c72f3 338 Gene3D G3DSA:1.10.1040.10 191 333 5.5E-54 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RR42_RS01845 a8693d3595994ab6c0a77a12304c72f3 338 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2 165 1.2E-35 T 23-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RR42_RS01845 a8693d3595994ab6c0a77a12304c72f3 338 PANTHER PTHR11728 1 338 4.7E-110 T 23-04-2016 RR42_RS01845 a8693d3595994ab6c0a77a12304c72f3 338 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 329 34.809 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RR42_RS01845 a8693d3595994ab6c0a77a12304c72f3 338 SUPERFAMILY SSF51735 1 187 2.03E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS01845 a8693d3595994ab6c0a77a12304c72f3 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 245 262 6.8E-35 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RR42_RS01845 a8693d3595994ab6c0a77a12304c72f3 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 140 160 6.8E-35 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RR42_RS01845 a8693d3595994ab6c0a77a12304c72f3 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 205 229 6.8E-35 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RR42_RS01845 a8693d3595994ab6c0a77a12304c72f3 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 180 204 6.8E-35 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RR42_RS01845 a8693d3595994ab6c0a77a12304c72f3 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 5 22 6.8E-35 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RR42_RS11590 482fd1a563726dd2045b21f47efa4701 201 SUPERFAMILY SSF55469 26 201 2.75E-28 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 RR42_RS11590 482fd1a563726dd2045b21f47efa4701 201 PANTHER PTHR23026 1 199 2.9E-51 T 23-04-2016 RR42_RS11590 482fd1a563726dd2045b21f47efa4701 201 Gene3D G3DSA:3.40.109.10 17 201 1.1E-29 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 RR42_RS11590 482fd1a563726dd2045b21f47efa4701 201 Pfam PF00881 Nitroreductase family 32 199 1.1E-20 T 23-04-2016 IPR029479 Nitroreductase RR42_RS11590 482fd1a563726dd2045b21f47efa4701 201 PANTHER PTHR23026:SF112 1 199 2.9E-51 T 23-04-2016 RR42_RS11625 21eba81c60532aaff763906ad15a225e 449 SUPERFAMILY SSF53474 238 441 1.54E-16 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS11625 21eba81c60532aaff763906ad15a225e 449 Pfam PF00156 Phosphoribosyl transferase domain 11 183 6.7E-27 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RR42_RS11625 21eba81c60532aaff763906ad15a225e 449 SUPERFAMILY SSF53271 7 210 9.85E-32 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS11625 21eba81c60532aaff763906ad15a225e 449 Gene3D G3DSA:3.40.50.1820 237 441 3.4E-17 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS11625 21eba81c60532aaff763906ad15a225e 449 PANTHER PTHR31299 6 216 3.0E-36 T 23-04-2016 RR42_RS11625 21eba81c60532aaff763906ad15a225e 449 Gene3D G3DSA:3.40.50.2020 5 185 3.4E-26 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS09745 8f199cda0223f5b019e3a83ee72a1ad7 335 PANTHER PTHR11695 17 334 4.2E-150 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RR42_RS09745 8f199cda0223f5b019e3a83ee72a1ad7 335 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 23-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 RR42_RS09745 8f199cda0223f5b019e3a83ee72a1ad7 335 PANTHER PTHR11695:SF403 17 334 4.2E-150 T 23-04-2016 RR42_RS09745 8f199cda0223f5b019e3a83ee72a1ad7 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 137 1.2E-32 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RR42_RS09745 8f199cda0223f5b019e3a83ee72a1ad7 335 Gene3D G3DSA:3.40.50.720 174 279 1.8E-6 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS09745 8f199cda0223f5b019e3a83ee72a1ad7 335 SUPERFAMILY SSF51735 142 299 7.3E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS09745 8f199cda0223f5b019e3a83ee72a1ad7 335 Gene3D G3DSA:3.90.180.10 2 173 1.3E-61 T 23-04-2016 IPR011032 GroES-like RR42_RS09745 8f199cda0223f5b019e3a83ee72a1ad7 335 SMART SM00829 12 332 3.5E-4 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RR42_RS09745 8f199cda0223f5b019e3a83ee72a1ad7 335 SUPERFAMILY SSF50129 3 145 8.52E-52 T 23-04-2016 IPR011032 GroES-like RR42_RS09745 8f199cda0223f5b019e3a83ee72a1ad7 335 SUPERFAMILY SSF50129 304 326 8.52E-52 T 23-04-2016 IPR011032 GroES-like RR42_RS09745 8f199cda0223f5b019e3a83ee72a1ad7 335 TIGRFAM TIGR02822 adh_fam_2: zinc-binding alcohol dehydrogenase family protein 16 332 2.0E-100 T 23-04-2016 IPR014187 Alcohol dehydrogenase, zinc-binding type 2 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 RR42_RS15385 c357da0b05b4910ed0be000776b70e04 418 SUPERFAMILY SSF53383 5 402 4.19E-90 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS15385 c357da0b05b4910ed0be000776b70e04 418 Gene3D G3DSA:3.90.1150.10 259 417 8.1E-59 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS15385 c357da0b05b4910ed0be000776b70e04 418 TIGRFAM TIGR01814 kynureninase: kynureninase 10 402 8.4E-107 T 23-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 RR42_RS15385 c357da0b05b4910ed0be000776b70e04 418 PANTHER PTHR14084 1 411 2.5E-137 T 23-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 RR42_RS15385 c357da0b05b4910ed0be000776b70e04 418 Pfam PF00266 Aminotransferase class-V 81 354 4.5E-16 T 23-04-2016 IPR000192 Aminotransferase class V domain RR42_RS15385 c357da0b05b4910ed0be000776b70e04 418 PIRSF PIRSF038800 1 409 1.7E-144 T 23-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 RR42_RS15385 c357da0b05b4910ed0be000776b70e04 418 Gene3D G3DSA:3.40.640.10 27 258 1.1E-22 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS15385 c357da0b05b4910ed0be000776b70e04 418 Hamap MF_01970 Kynureninase [kynU]. 1 401 34.794 T 23-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 RR42_RS04585 0c63b23ab7047ffabd098847f57e1d22 434 Gene3D G3DSA:3.40.50.720 357 421 4.2E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS04585 0c63b23ab7047ffabd098847f57e1d22 434 Gene3D G3DSA:3.40.50.720 194 273 4.2E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS04585 0c63b23ab7047ffabd098847f57e1d22 434 Gene3D G3DSA:3.40.50.720 1 96 4.2E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS04585 0c63b23ab7047ffabd098847f57e1d22 434 PANTHER PTHR13847:SF148 1 63 3.8E-215 T 23-04-2016 RR42_RS04585 0c63b23ab7047ffabd098847f57e1d22 434 PANTHER PTHR13847:SF148 107 421 3.8E-215 T 23-04-2016 RR42_RS04585 0c63b23ab7047ffabd098847f57e1d22 434 Gene3D G3DSA:3.30.9.10 134 193 4.3E-15 T 23-04-2016 RR42_RS04585 0c63b23ab7047ffabd098847f57e1d22 434 Gene3D G3DSA:3.30.9.10 274 356 4.3E-15 T 23-04-2016 RR42_RS04585 0c63b23ab7047ffabd098847f57e1d22 434 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 414 49.914 T 23-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 RR42_RS04585 0c63b23ab7047ffabd098847f57e1d22 434 PANTHER PTHR13847 1 63 3.8E-215 T 23-04-2016 RR42_RS04585 0c63b23ab7047ffabd098847f57e1d22 434 PANTHER PTHR13847 107 421 3.8E-215 T 23-04-2016 RR42_RS04585 0c63b23ab7047ffabd098847f57e1d22 434 SUPERFAMILY SSF54373 273 363 3.79E-18 T 23-04-2016 RR42_RS04585 0c63b23ab7047ffabd098847f57e1d22 434 Pfam PF01266 FAD dependent oxidoreductase 3 401 1.3E-69 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RR42_RS04585 0c63b23ab7047ffabd098847f57e1d22 434 SUPERFAMILY SSF51905 1 54 1.42E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS04585 0c63b23ab7047ffabd098847f57e1d22 434 SUPERFAMILY SSF51905 107 275 1.42E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS04585 0c63b23ab7047ffabd098847f57e1d22 434 SUPERFAMILY SSF51905 363 422 1.42E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS27600 a3315e2ce8a6c9b69a7160ec919eea9d 98 PANTHER PTHR11271:SF37 1 92 2.2E-21 T 23-04-2016 RR42_RS27600 a3315e2ce8a6c9b69a7160ec919eea9d 98 Gene3D G3DSA:2.30.40.10 7 61 2.2E-12 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS27600 a3315e2ce8a6c9b69a7160ec919eea9d 98 SUPERFAMILY SSF51338 6 69 1.86E-10 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS27600 a3315e2ce8a6c9b69a7160ec919eea9d 98 Gene3D G3DSA:3.20.20.140 62 96 8.8E-8 T 23-04-2016 RR42_RS27600 a3315e2ce8a6c9b69a7160ec919eea9d 98 PANTHER PTHR11271 1 92 2.2E-21 T 23-04-2016 RR42_RS17390 6f91c5b1128b3246d706adb284473a0d 733 PANTHER PTHR24031 287 311 2.0E-122 T 23-04-2016 RR42_RS17390 6f91c5b1128b3246d706adb284473a0d 733 PANTHER PTHR24031 666 717 2.0E-122 T 23-04-2016 RR42_RS17390 6f91c5b1128b3246d706adb284473a0d 733 PANTHER PTHR24031 328 443 2.0E-122 T 23-04-2016 RR42_RS17390 6f91c5b1128b3246d706adb284473a0d 733 PANTHER PTHR24031 462 643 2.0E-122 T 23-04-2016 RR42_RS17390 6f91c5b1128b3246d706adb284473a0d 733 Gene3D G3DSA:3.40.50.300 286 494 5.3E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17390 6f91c5b1128b3246d706adb284473a0d 733 SMART SM00490 545 629 4.6E-21 T 23-04-2016 IPR001650 Helicase, C-terminal RR42_RS17390 6f91c5b1128b3246d706adb284473a0d 733 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 57 705 9.7E-210 T 23-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 RR42_RS17390 6f91c5b1128b3246d706adb284473a0d 733 Gene3D G3DSA:3.40.50.300 495 677 5.8E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17390 6f91c5b1128b3246d706adb284473a0d 733 Gene3D G3DSA:2.40.50.140 82 166 3.5E-11 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS17390 6f91c5b1128b3246d706adb284473a0d 733 SUPERFAMILY SSF52540 244 494 2.04E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17390 6f91c5b1128b3246d706adb284473a0d 733 Pfam PF00270 DEAD/DEAH box helicase 302 474 6.2E-16 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RR42_RS17390 6f91c5b1128b3246d706adb284473a0d 733 Pfam PF17191 RecG wedge domain 46 193 5.2E-8 T 23-04-2016 IPR033454 RecG, wedge domain RR42_RS17390 6f91c5b1128b3246d706adb284473a0d 733 SMART SM00487 294 500 6.6E-30 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RR42_RS17390 6f91c5b1128b3246d706adb284473a0d 733 SUPERFAMILY SSF52540 493 695 2.32E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17390 6f91c5b1128b3246d706adb284473a0d 733 PANTHER PTHR24031:SF249 287 311 2.0E-122 T 23-04-2016 RR42_RS17390 6f91c5b1128b3246d706adb284473a0d 733 PANTHER PTHR24031:SF249 666 717 2.0E-122 T 23-04-2016 RR42_RS17390 6f91c5b1128b3246d706adb284473a0d 733 PANTHER PTHR24031:SF249 328 443 2.0E-122 T 23-04-2016 RR42_RS17390 6f91c5b1128b3246d706adb284473a0d 733 PANTHER PTHR24031:SF249 462 643 2.0E-122 T 23-04-2016 RR42_RS17390 6f91c5b1128b3246d706adb284473a0d 733 Pfam PF00271 Helicase conserved C-terminal domain 518 628 2.7E-18 T 23-04-2016 IPR001650 Helicase, C-terminal RR42_RS17390 6f91c5b1128b3246d706adb284473a0d 733 SUPERFAMILY SSF50249 45 199 6.85E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS28765 7b261fd27a4e3b7cfa517ef3ff9465a9 143 PANTHER PTHR35862 2 143 4.1E-53 T 23-04-2016 RR42_RS28765 7b261fd27a4e3b7cfa517ef3ff9465a9 143 PANTHER PTHR35862:SF1 2 143 4.1E-53 T 23-04-2016 RR42_RS28765 7b261fd27a4e3b7cfa517ef3ff9465a9 143 Pfam PF04865 Baseplate J-like protein 60 143 2.3E-13 T 23-04-2016 IPR006949 Baseplate protein J-like RR42_RS35735 94cc6eb676a206f193e7cb2372ff380b 101 SUPERFAMILY SSF52374 16 100 1.07E-13 T 23-04-2016 RR42_RS35735 94cc6eb676a206f193e7cb2372ff380b 101 Gene3D G3DSA:3.40.50.620 7 100 1.6E-12 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS35735 94cc6eb676a206f193e7cb2372ff380b 101 Pfam PF09334 tRNA synthetases class I (M) 3 101 1.6E-20 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RR42_RS01745 1517cc9d5f3e1679791b743a4c95d05b 87 PANTHER PTHR38040:SF1 1 84 2.7E-21 T 23-04-2016 RR42_RS01745 1517cc9d5f3e1679791b743a4c95d05b 87 Pfam PF04380 Membrane fusogenic activity 1 74 7.8E-31 T 23-04-2016 IPR007475 Membrane fusogenic activity RR42_RS01745 1517cc9d5f3e1679791b743a4c95d05b 87 PANTHER PTHR38040 1 84 2.7E-21 T 23-04-2016 RR42_RS17235 8e9e09e47bbda2d1e454b7fe58f59feb 537 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 16 502 36.368 T 23-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 RR42_RS17235 8e9e09e47bbda2d1e454b7fe58f59feb 537 PANTHER PTHR13734:SF47 15 299 6.7E-105 T 23-04-2016 RR42_RS17235 8e9e09e47bbda2d1e454b7fe58f59feb 537 SUPERFAMILY SSF81301 157 209 3.27E-36 T 23-04-2016 RR42_RS17235 8e9e09e47bbda2d1e454b7fe58f59feb 537 SUPERFAMILY SSF81301 36 130 3.27E-36 T 23-04-2016 RR42_RS17235 8e9e09e47bbda2d1e454b7fe58f59feb 537 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 239 301 7.0E-22 T 23-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain RR42_RS17235 8e9e09e47bbda2d1e454b7fe58f59feb 537 Gene3D G3DSA:3.30.460.10 45 211 1.7E-48 T 23-04-2016 RR42_RS17235 8e9e09e47bbda2d1e454b7fe58f59feb 537 Gene3D G3DSA:1.10.3090.10 212 443 1.2E-48 T 23-04-2016 RR42_RS17235 8e9e09e47bbda2d1e454b7fe58f59feb 537 Pfam PF01743 Poly A polymerase head domain 63 212 5.3E-32 T 23-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 RR42_RS17235 8e9e09e47bbda2d1e454b7fe58f59feb 537 Pfam PF12626 Polymerase A arginine-rich C-terminus 352 494 4.6E-41 T 23-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain RR42_RS17235 8e9e09e47bbda2d1e454b7fe58f59feb 537 SUPERFAMILY SSF81891 210 444 5.23E-55 T 23-04-2016 RR42_RS17235 8e9e09e47bbda2d1e454b7fe58f59feb 537 PANTHER PTHR13734 15 299 6.7E-105 T 23-04-2016 RR42_RS17235 8e9e09e47bbda2d1e454b7fe58f59feb 537 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 32 454 2.2E-146 T 23-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 RR42_RS05290 ca1e76aa82b2e9cd1c667ad35b721a8d 222 SMART SM00248 66 95 0.024 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 RR42_RS05290 ca1e76aa82b2e9cd1c667ad35b721a8d 222 SMART SM00248 99 128 0.59 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 RR42_RS05290 ca1e76aa82b2e9cd1c667ad35b721a8d 222 SMART SM00248 132 161 0.015 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 RR42_RS05290 ca1e76aa82b2e9cd1c667ad35b721a8d 222 SMART SM00248 165 194 0.016 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 RR42_RS05290 ca1e76aa82b2e9cd1c667ad35b721a8d 222 PANTHER PTHR24123 38 202 9.9E-43 T 23-04-2016 RR42_RS05290 ca1e76aa82b2e9cd1c667ad35b721a8d 222 Pfam PF12796 Ankyrin repeats (3 copies) 133 196 1.5E-9 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain RR42_RS05290 ca1e76aa82b2e9cd1c667ad35b721a8d 222 Pfam PF12796 Ankyrin repeats (3 copies) 40 130 2.9E-12 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain RR42_RS05290 ca1e76aa82b2e9cd1c667ad35b721a8d 222 Gene3D G3DSA:1.25.40.20 128 219 3.0E-26 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain RR42_RS05290 ca1e76aa82b2e9cd1c667ad35b721a8d 222 SUPERFAMILY SSF48403 35 218 3.28E-46 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain RR42_RS05290 ca1e76aa82b2e9cd1c667ad35b721a8d 222 Gene3D G3DSA:1.25.40.20 38 127 8.0E-26 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain RR42_RS08650 5995a3f68ac46d3fb43e6f4d5dffe759 592 Pfam PF03237 Terminase-like family 167 575 3.7E-105 T 23-04-2016 IPR004921 Terminase, large subunit RR42_RS08650 5995a3f68ac46d3fb43e6f4d5dffe759 592 Gene3D G3DSA:1.10.10.60 18 98 4.7E-4 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS08650 5995a3f68ac46d3fb43e6f4d5dffe759 592 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 16 73 4.8E-25 T 23-04-2016 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 RR42_RS17700 605323ed112de0afb22366e20e3b416c 455 PANTHER PTHR18866 1 447 1.4E-288 T 23-04-2016 RR42_RS17700 605323ed112de0afb22366e20e3b416c 455 SUPERFAMILY SSF51246 331 444 1.05E-42 T 23-04-2016 IPR011054 Rudiment single hybrid motif RR42_RS17700 605323ed112de0afb22366e20e3b416c 455 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RR42_RS17700 605323ed112de0afb22366e20e3b416c 455 SUPERFAMILY SSF56059 83 348 4.71E-70 T 23-04-2016 RR42_RS17700 605323ed112de0afb22366e20e3b416c 455 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.6E-38 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal RR42_RS17700 605323ed112de0afb22366e20e3b416c 455 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.6E-45 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain RR42_RS17700 605323ed112de0afb22366e20e3b416c 455 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 6.7E-80 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RR42_RS17700 605323ed112de0afb22366e20e3b416c 455 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 8.6E-223 T 23-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 RR42_RS17700 605323ed112de0afb22366e20e3b416c 455 Gene3D G3DSA:3.30.470.20 204 444 7.9E-97 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RR42_RS17700 605323ed112de0afb22366e20e3b416c 455 SUPERFAMILY SSF52440 1 113 1.51E-48 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RR42_RS17700 605323ed112de0afb22366e20e3b416c 455 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RR42_RS17700 605323ed112de0afb22366e20e3b416c 455 SMART SM00878 336 441 9.9E-65 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal RR42_RS17700 605323ed112de0afb22366e20e3b416c 455 Gene3D G3DSA:3.30.1490.20 130 203 1.7E-28 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RR42_RS17700 605323ed112de0afb22366e20e3b416c 455 Gene3D G3DSA:3.40.50.20 1 129 2.6E-52 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RR42_RS17560 3431cc437a3aaed911e542ac8aacc966 143 PANTHER PTHR33202 5 134 5.7E-38 T 23-04-2016 RR42_RS17560 3431cc437a3aaed911e542ac8aacc966 143 Gene3D G3DSA:1.10.10.10 6 82 6.9E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS17560 3431cc437a3aaed911e542ac8aacc966 143 SUPERFAMILY SSF46785 6 133 7.08E-40 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS17560 3431cc437a3aaed911e542ac8aacc966 143 Pfam PF01475 Ferric uptake regulator family 10 129 2.1E-45 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 RR42_RS09955 83004d06e2be95e79d20955025559203 159 PANTHER PTHR34846:SF2 10 141 1.9E-12 T 23-04-2016 RR42_RS09955 83004d06e2be95e79d20955025559203 159 PANTHER PTHR34846 10 141 1.9E-12 T 23-04-2016 RR42_RS09955 83004d06e2be95e79d20955025559203 159 Gene3D G3DSA:1.20.1290.10 2 147 2.1E-53 T 23-04-2016 IPR029032 AhpD-like RR42_RS09955 83004d06e2be95e79d20955025559203 159 Pfam PF02627 Carboxymuconolactone decarboxylase family 23 93 1.0E-18 T 23-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RR42_RS09955 83004d06e2be95e79d20955025559203 159 SUPERFAMILY SSF69118 4 145 2.49E-46 T 23-04-2016 IPR029032 AhpD-like RR42_RS09955 83004d06e2be95e79d20955025559203 159 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 34 78 4.0E-13 T 23-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RR42_RS17405 f8e26d8512a3a17f33ba80d7c549a128 109 PANTHER PTHR33909 1 109 4.0E-31 T 23-04-2016 RR42_RS17405 f8e26d8512a3a17f33ba80d7c549a128 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 59 77 6.7E-15 T 23-04-2016 IPR003849 Preprotein translocase YajC RR42_RS17405 f8e26d8512a3a17f33ba80d7c549a128 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 6.7E-15 T 23-04-2016 IPR003849 Preprotein translocase YajC RR42_RS17405 f8e26d8512a3a17f33ba80d7c549a128 109 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 21 101 8.0E-28 T 23-04-2016 IPR003849 Preprotein translocase YajC RR42_RS17405 f8e26d8512a3a17f33ba80d7c549a128 109 PANTHER PTHR33909:SF1 1 109 4.0E-31 T 23-04-2016 RR42_RS17405 f8e26d8512a3a17f33ba80d7c549a128 109 Pfam PF02699 Preprotein translocase subunit 22 98 3.2E-31 T 23-04-2016 IPR003849 Preprotein translocase YajC RR42_RS17405 f8e26d8512a3a17f33ba80d7c549a128 109 SMART SM01323 19 101 1.9E-46 T 23-04-2016 IPR003849 Preprotein translocase YajC RR42_RS11850 62c7a34671c537aba546c8e683676f7b 273 PANTHER PTHR13773 1 272 3.6E-55 T 23-04-2016 RR42_RS11850 62c7a34671c537aba546c8e683676f7b 273 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 231 257 - T 23-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 RR42_RS11850 62c7a34671c537aba546c8e683676f7b 273 Pfam PF01148 Cytidylyltransferase family 4 269 1.7E-53 T 23-04-2016 RR42_RS11850 62c7a34671c537aba546c8e683676f7b 273 PANTHER PTHR13773:SF0 1 272 3.6E-55 T 23-04-2016 RR42_RS03405 f601c19f833d928aabb4eedf7bade48c 406 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 52 402 2.5E-132 T 23-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 RR42_RS03405 f601c19f833d928aabb4eedf7bade48c 406 PANTHER PTHR30002 40 402 3.4E-145 T 23-04-2016 RR42_RS03405 f601c19f833d928aabb4eedf7bade48c 406 SUPERFAMILY SSF46548 183 300 7.32E-20 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RR42_RS03405 f601c19f833d928aabb4eedf7bade48c 406 Pfam PF13484 4Fe-4S double cluster binding domain 236 300 2.5E-20 T 23-04-2016 RR42_RS03405 f601c19f833d928aabb4eedf7bade48c 406 PANTHER PTHR30002:SF4 40 402 3.4E-145 T 23-04-2016 RR42_RS03405 f601c19f833d928aabb4eedf7bade48c 406 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 237 248 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RR42_RS03405 f601c19f833d928aabb4eedf7bade48c 406 Pfam PF08331 Domain of unknown function (DUF1730) 100 184 2.4E-20 T 23-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 RR42_RS03405 f601c19f833d928aabb4eedf7bade48c 406 Gene3D G3DSA:3.30.70.20 235 302 1.7E-6 T 23-04-2016 RR42_RS03405 f601c19f833d928aabb4eedf7bade48c 406 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 45 359 47.652 T 23-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 RR42_RS20025 669377563d662eaedaaf325f1347102e 533 PANTHER PTHR13932 43 509 1.0E-215 T 23-04-2016 RR42_RS20025 669377563d662eaedaaf325f1347102e 533 Gene3D G3DSA:3.80.30.20 110 305 2.0E-29 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RR42_RS20025 669377563d662eaedaaf325f1347102e 533 Pfam PF06969 HemN C-terminal domain 423 489 6.5E-7 T 23-04-2016 IPR010723 HemN, C-terminal RR42_RS20025 669377563d662eaedaaf325f1347102e 533 SUPERFAMILY SSF102114 55 499 5.76E-131 T 23-04-2016 RR42_RS20025 669377563d662eaedaaf325f1347102e 533 Pfam PF04055 Radical SAM superfamily 114 285 1.9E-18 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RR42_RS20025 669377563d662eaedaaf325f1347102e 533 PANTHER PTHR13932:SF6 43 509 1.0E-215 T 23-04-2016 RR42_RS20025 669377563d662eaedaaf325f1347102e 533 SMART SM00729 109 330 1.9E-50 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RR42_RS01645 ced4d938d2c93a1e9a1009b3b691291b 444 SUPERFAMILY SSF53822 42 410 2.73E-48 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RR42_RS01645 ced4d938d2c93a1e9a1009b3b691291b 444 Gene3D G3DSA:3.40.50.2300 41 159 1.8E-6 T 23-04-2016 RR42_RS01645 ced4d938d2c93a1e9a1009b3b691291b 444 Gene3D G3DSA:3.40.50.2300 326 363 1.8E-6 T 23-04-2016 RR42_RS01645 ced4d938d2c93a1e9a1009b3b691291b 444 Pfam PF13458 Periplasmic binding protein 34 404 2.7E-68 T 23-04-2016 IPR028081 Leucine-binding protein domain RR42_RS01645 ced4d938d2c93a1e9a1009b3b691291b 444 PANTHER PTHR30483 1 439 5.0E-13 T 23-04-2016 RR42_RS01645 ced4d938d2c93a1e9a1009b3b691291b 444 Gene3D G3DSA:3.40.50.2300 160 290 7.5E-17 T 23-04-2016 RR42_RS12335 fe5eed6f89d8034aac4ce5105e253549 433 SUPERFAMILY SSF53649 2 410 2.33E-113 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RR42_RS12335 fe5eed6f89d8034aac4ce5105e253549 433 ProSitePatterns PS00149 Sulfatases signature 2. 102 112 - T 23-04-2016 IPR024607 Sulfatase, conserved site RR42_RS12335 fe5eed6f89d8034aac4ce5105e253549 433 Gene3D G3DSA:3.40.720.10 2 357 1.1E-100 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RR42_RS12335 fe5eed6f89d8034aac4ce5105e253549 433 Gene3D G3DSA:3.30.1120.10 358 416 1.1E-15 T 23-04-2016 RR42_RS12335 fe5eed6f89d8034aac4ce5105e253549 433 Pfam PF00884 Sulfatase 3 321 1.1E-70 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RR42_RS12335 fe5eed6f89d8034aac4ce5105e253549 433 PANTHER PTHR10342:SF199 2 205 5.9E-121 T 23-04-2016 RR42_RS12335 fe5eed6f89d8034aac4ce5105e253549 433 PANTHER PTHR10342:SF199 223 433 5.9E-121 T 23-04-2016 RR42_RS12335 fe5eed6f89d8034aac4ce5105e253549 433 PANTHER PTHR10342 2 205 5.9E-121 T 23-04-2016 RR42_RS12335 fe5eed6f89d8034aac4ce5105e253549 433 PANTHER PTHR10342 223 433 5.9E-121 T 23-04-2016 RR42_RS12060 cf8581ae13989eac85e9dad8d8f83646 255 Gene3D G3DSA:3.30.420.40 3 145 4.2E-35 T 23-04-2016 RR42_RS12060 cf8581ae13989eac85e9dad8d8f83646 255 Pfam PF00814 Glycoprotease family 40 163 2.0E-25 T 23-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RR42_RS12060 cf8581ae13989eac85e9dad8d8f83646 255 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 229 9.2E-51 T 23-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 RR42_RS12060 cf8581ae13989eac85e9dad8d8f83646 255 PANTHER PTHR11735 1 143 1.1E-31 T 23-04-2016 RR42_RS12060 cf8581ae13989eac85e9dad8d8f83646 255 PANTHER PTHR11735:SF11 1 143 1.1E-31 T 23-04-2016 RR42_RS12060 cf8581ae13989eac85e9dad8d8f83646 255 SUPERFAMILY SSF53067 124 227 2.07E-19 T 23-04-2016 RR42_RS12060 cf8581ae13989eac85e9dad8d8f83646 255 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 5 18 5.7E-5 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RR42_RS12060 cf8581ae13989eac85e9dad8d8f83646 255 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 65 85 5.7E-5 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RR42_RS12060 cf8581ae13989eac85e9dad8d8f83646 255 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 86 105 5.7E-5 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RR42_RS12060 cf8581ae13989eac85e9dad8d8f83646 255 SUPERFAMILY SSF53067 3 110 1.94E-23 T 23-04-2016 RR42_RS02415 a478a1c5cc9558fe88595cbf838cecce 525 Gene3D G3DSA:3.90.1200.10 265 335 9.7E-5 T 23-04-2016 RR42_RS02415 a478a1c5cc9558fe88595cbf838cecce 525 PANTHER PTHR10566:SF79 6 514 3.1E-229 T 23-04-2016 RR42_RS02415 a478a1c5cc9558fe88595cbf838cecce 525 SUPERFAMILY SSF56112 192 435 2.35E-42 T 23-04-2016 IPR011009 Protein kinase-like domain RR42_RS02415 a478a1c5cc9558fe88595cbf838cecce 525 SUPERFAMILY SSF56112 90 157 2.35E-42 T 23-04-2016 IPR011009 Protein kinase-like domain RR42_RS02415 a478a1c5cc9558fe88595cbf838cecce 525 PANTHER PTHR10566 6 514 3.1E-229 T 23-04-2016 RR42_RS02415 a478a1c5cc9558fe88595cbf838cecce 525 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 4 442 4.4E-173 T 23-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 RR42_RS02415 a478a1c5cc9558fe88595cbf838cecce 525 Pfam PF03109 ABC1 family 108 229 5.0E-33 T 23-04-2016 IPR004147 UbiB domain RR42_RS02415 a478a1c5cc9558fe88595cbf838cecce 525 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 525 51.955 T 23-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 RR42_RS15180 18071913f85cb28bfac63d1be655928b 500 PANTHER PTHR35342:SF2 2 500 7.6E-299 T 23-04-2016 RR42_RS15180 18071913f85cb28bfac63d1be655928b 500 PANTHER PTHR35342 2 500 7.6E-299 T 23-04-2016 RR42_RS15180 18071913f85cb28bfac63d1be655928b 500 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 438 2.0E-153 T 23-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane RR42_RS06715 1bdde72d2f44b79f76d81098d607394b 390 Pfam PF07505 Protein of unknown function (DUF5131) 5 386 8.6E-97 T 23-04-2016 IPR011101 Protein of unknown function DUF5131 RR42_RS07855 fe3947bbb79313d0187c2625189dcd56 169 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 6 161 36.258 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RR42_RS07855 fe3947bbb79313d0187c2625189dcd56 169 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 7 160 3.9E-65 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RR42_RS07855 fe3947bbb79313d0187c2625189dcd56 169 Gene3D G3DSA:3.30.1330.50 4 161 1.4E-71 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RR42_RS07855 fe3947bbb79313d0187c2625189dcd56 169 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 40 55 - T 23-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RR42_RS07855 fe3947bbb79313d0187c2625189dcd56 169 PANTHER PTHR32125 4 161 7.9E-57 T 23-04-2016 RR42_RS07855 fe3947bbb79313d0187c2625189dcd56 169 Pfam PF02542 YgbB family 6 159 8.4E-65 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RR42_RS07855 fe3947bbb79313d0187c2625189dcd56 169 SUPERFAMILY SSF69765 6 161 4.84E-66 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RR42_RS22300 413e32f9d2e557cadd64c708b26e6581 240 SUPERFAMILY SSF53732 145 240 2.22E-11 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS22300 413e32f9d2e557cadd64c708b26e6581 240 PANTHER PTHR11670 95 240 2.3E-14 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS22300 413e32f9d2e557cadd64c708b26e6581 240 PANTHER PTHR11670:SF12 95 240 2.3E-14 T 23-04-2016 RR42_RS22300 413e32f9d2e557cadd64c708b26e6581 240 Pfam PF00330 Aconitase family (aconitate hydratase) 156 227 3.9E-7 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS09090 d912e68225653b0ae17e254e0a8a6b26 320 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 302 5.0E-45 T 23-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 RR42_RS09090 d912e68225653b0ae17e254e0a8a6b26 320 PANTHER PTHR33376 1 320 8.4E-55 T 23-04-2016 RR42_RS18590 e08428938ad9ee8a3a8000f4ccc0c797 342 SUPERFAMILY SSF50331 189 312 4.62E-28 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RR42_RS18590 e08428938ad9ee8a3a8000f4ccc0c797 342 SUPERFAMILY SSF52540 1 195 1.05E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18590 e08428938ad9ee8a3a8000f4ccc0c797 342 Gene3D G3DSA:2.40.50.100 298 312 9.2E-10 T 23-04-2016 RR42_RS18590 e08428938ad9ee8a3a8000f4ccc0c797 342 Gene3D G3DSA:2.40.50.100 192 239 9.2E-10 T 23-04-2016 RR42_RS18590 e08428938ad9ee8a3a8000f4ccc0c797 342 PANTHER PTHR24220 1 340 3.1E-133 T 23-04-2016 RR42_RS18590 e08428938ad9ee8a3a8000f4ccc0c797 342 Gene3D G3DSA:2.40.50.140 240 297 1.1E-9 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS18590 e08428938ad9ee8a3a8000f4ccc0c797 342 Pfam PF00005 ABC transporter 1 114 1.1E-16 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS18590 e08428938ad9ee8a3a8000f4ccc0c797 342 PANTHER PTHR24220:SF151 1 340 3.1E-133 T 23-04-2016 RR42_RS18590 e08428938ad9ee8a3a8000f4ccc0c797 342 Pfam PF08402 TOBE domain 236 304 7.8E-7 T 23-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 RR42_RS18590 e08428938ad9ee8a3a8000f4ccc0c797 342 ProSitePatterns PS00211 ABC transporters family signature. 87 101 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS18590 e08428938ad9ee8a3a8000f4ccc0c797 342 Gene3D G3DSA:3.40.50.300 1 187 1.5E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14155 706a870d7abd4cd74776121b9644a204 333 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 149 163 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS14155 706a870d7abd4cd74776121b9644a204 333 Pfam PF00849 RNA pseudouridylate synthase 111 259 1.3E-30 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS14155 706a870d7abd4cd74776121b9644a204 333 SUPERFAMILY SSF55120 98 327 7.52E-65 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS14155 706a870d7abd4cd74776121b9644a204 333 PANTHER PTHR11079:SF84 1 329 1.8E-113 T 23-04-2016 RR42_RS14155 706a870d7abd4cd74776121b9644a204 333 Gene3D G3DSA:3.10.290.10 33 81 8.1E-5 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RR42_RS14155 706a870d7abd4cd74776121b9644a204 333 SMART SM00363 33 92 1.2E-4 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RR42_RS14155 706a870d7abd4cd74776121b9644a204 333 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 29 325 2.9E-80 T 23-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS14155 706a870d7abd4cd74776121b9644a204 333 Pfam PF01479 S4 domain 33 79 4.8E-8 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RR42_RS14155 706a870d7abd4cd74776121b9644a204 333 SUPERFAMILY SSF55174 32 83 6.8E-8 T 23-04-2016 RR42_RS14155 706a870d7abd4cd74776121b9644a204 333 PANTHER PTHR11079 1 329 1.8E-113 T 23-04-2016 RR42_RS14375 02f52c8955c5000dc7815f9f3a396954 960 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 236 308 1.2E-25 T 23-04-2016 IPR020012 Motility protein FimV, N-terminal RR42_RS14375 02f52c8955c5000dc7815f9f3a396954 960 Gene3D G3DSA:3.10.350.10 229 287 1.8E-4 T 23-04-2016 IPR018392 LysM domain RR42_RS14375 02f52c8955c5000dc7815f9f3a396954 960 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 916 957 8.8E-18 T 23-04-2016 IPR020011 Motility protein FimV, C-terminal RR42_RS14375 02f52c8955c5000dc7815f9f3a396954 960 Gene3D G3DSA:1.25.40.10 624 702 1.1E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS14375 02f52c8955c5000dc7815f9f3a396954 960 Gene3D G3DSA:1.25.40.10 914 943 1.1E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS17195 52adc072d16437ae626946eea629e71c 282 PANTHER PTHR31350:SF1 23 280 8.2E-39 T 23-04-2016 RR42_RS17195 52adc072d16437ae626946eea629e71c 282 Pfam PF13371 Tetratricopeptide repeat 200 271 4.6E-23 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS17195 52adc072d16437ae626946eea629e71c 282 PANTHER PTHR31350 23 280 8.2E-39 T 23-04-2016 RR42_RS17195 52adc072d16437ae626946eea629e71c 282 Pfam PF13369 Transglutaminase-like superfamily 43 198 7.7E-48 T 23-04-2016 IPR032698 Protein SirB1, N-terminal RR42_RS17195 52adc072d16437ae626946eea629e71c 282 Gene3D G3DSA:1.25.40.10 109 119 5.9E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS17195 52adc072d16437ae626946eea629e71c 282 Gene3D G3DSA:1.25.40.10 196 263 5.9E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS15790 bc3a323ab734c707dff17bf77f9647aa 429 PANTHER PTHR11986 3 409 2.3E-103 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RR42_RS15790 bc3a323ab734c707dff17bf77f9647aa 429 SUPERFAMILY SSF53383 5 401 1.17E-91 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS15790 bc3a323ab734c707dff17bf77f9647aa 429 Gene3D G3DSA:3.40.640.10 76 304 1.5E-61 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS15790 bc3a323ab734c707dff17bf77f9647aa 429 Gene3D G3DSA:3.90.1150.10 311 401 1.4E-21 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS15790 bc3a323ab734c707dff17bf77f9647aa 429 Gene3D G3DSA:3.90.1150.10 3 75 1.4E-21 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS15790 bc3a323ab734c707dff17bf77f9647aa 429 PANTHER PTHR11986:SF5 3 409 2.3E-103 T 23-04-2016 RR42_RS15790 bc3a323ab734c707dff17bf77f9647aa 429 Pfam PF00202 Aminotransferase class-III 39 325 1.1E-55 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RR42_RS11830 0c89b96af532d73ab2c5078c03e9f1b9 175 SUPERFAMILY SSF111384 30 171 7.45E-35 T 23-04-2016 IPR024930 Skp domain RR42_RS11830 0c89b96af532d73ab2c5078c03e9f1b9 175 Gene3D G3DSA:3.30.910.20 21 68 2.6E-32 T 23-04-2016 RR42_RS11830 0c89b96af532d73ab2c5078c03e9f1b9 175 Gene3D G3DSA:3.30.910.20 106 171 2.6E-32 T 23-04-2016 RR42_RS11830 0c89b96af532d73ab2c5078c03e9f1b9 175 PANTHER PTHR35089:SF1 9 175 1.6E-36 T 23-04-2016 RR42_RS11830 0c89b96af532d73ab2c5078c03e9f1b9 175 Pfam PF03938 Outer membrane protein (OmpH-like) 18 170 1.4E-34 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 RR42_RS11830 0c89b96af532d73ab2c5078c03e9f1b9 175 SMART SM00935 19 171 9.2E-57 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 RR42_RS11830 0c89b96af532d73ab2c5078c03e9f1b9 175 PANTHER PTHR35089 9 175 1.6E-36 T 23-04-2016 RR42_RS11830 0c89b96af532d73ab2c5078c03e9f1b9 175 PIRSF PIRSF002094 7 174 3.6E-49 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 RR42_RS01940 e990c5883b6ec7e425560b492161e8d9 342 Gene3D G3DSA:3.40.1030.10 97 317 7.0E-23 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RR42_RS01940 e990c5883b6ec7e425560b492161e8d9 342 SUPERFAMILY SSF47648 24 91 4.84E-15 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain RR42_RS01940 e990c5883b6ec7e425560b492161e8d9 342 Pfam PF02885 Glycosyl transferase family, helical bundle domain 24 84 8.9E-11 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain RR42_RS01940 e990c5883b6ec7e425560b492161e8d9 342 SUPERFAMILY SSF52418 98 326 1.01E-36 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RR42_RS01940 e990c5883b6ec7e425560b492161e8d9 342 Gene3D G3DSA:1.20.970.10 25 88 5.8E-18 T 23-04-2016 RR42_RS20265 a4f2bae735dc6c637cf97d39df025245 342 PANTHER PTHR30482 28 342 7.0E-116 T 23-04-2016 RR42_RS20265 a4f2bae735dc6c637cf97d39df025245 342 PANTHER PTHR30482:SF8 28 342 7.0E-116 T 23-04-2016 RR42_RS20265 a4f2bae735dc6c637cf97d39df025245 342 Pfam PF02653 Branched-chain amino acid transport system / permease component 46 320 8.8E-33 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RR42_RS17255 ecf324de7b0c03f7e637ab14ab11e238 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 224 4.3E-12 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS17255 ecf324de7b0c03f7e637ab14ab11e238 232 SUPERFAMILY SSF161098 16 225 1.13E-36 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS17255 ecf324de7b0c03f7e637ab14ab11e238 232 PANTHER PTHR30183 1 226 1.2E-77 T 23-04-2016 RR42_RS17255 ecf324de7b0c03f7e637ab14ab11e238 232 Gene3D G3DSA:1.10.3720.10 18 227 8.2E-32 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS17255 ecf324de7b0c03f7e637ab14ab11e238 232 PANTHER PTHR30183:SF4 1 226 1.2E-77 T 23-04-2016 RR42_RS15200 1b0d7fd6b8071b0f36f97f07d2b291ba 286 Gene3D G3DSA:3.10.310.10 124 275 2.8E-37 T 23-04-2016 RR42_RS15200 1b0d7fd6b8071b0f36f97f07d2b291ba 286 Gene3D G3DSA:3.10.310.10 5 123 1.7E-35 T 23-04-2016 RR42_RS15200 1b0d7fd6b8071b0f36f97f07d2b291ba 286 PANTHER PTHR13774:SF15 1 286 9.5E-58 T 23-04-2016 RR42_RS15200 1b0d7fd6b8071b0f36f97f07d2b291ba 286 PANTHER PTHR13774 1 286 9.5E-58 T 23-04-2016 RR42_RS15200 1b0d7fd6b8071b0f36f97f07d2b291ba 286 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 278 4.5E-49 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- RR42_RS15200 1b0d7fd6b8071b0f36f97f07d2b291ba 286 Pfam PF02567 Phenazine biosynthesis-like protein 10 275 1.3E-48 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- RR42_RS15200 1b0d7fd6b8071b0f36f97f07d2b291ba 286 SUPERFAMILY SSF54506 3 285 6.46E-67 T 23-04-2016 RR42_RS15200 1b0d7fd6b8071b0f36f97f07d2b291ba 286 PIRSF PIRSF016184 1 286 6.0E-66 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- RR42_RS10690 fe8ded25ca6e47bbf46ea430c256daa3 259 PANTHER PTHR10992:SF861 11 259 7.7E-68 T 23-04-2016 RR42_RS10690 fe8ded25ca6e47bbf46ea430c256daa3 259 Gene3D G3DSA:3.40.50.1820 1 258 8.4E-68 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS10690 fe8ded25ca6e47bbf46ea430c256daa3 259 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 10 258 8.1E-96 T 23-04-2016 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185|UniPathway: UPA00157 RR42_RS10690 fe8ded25ca6e47bbf46ea430c256daa3 259 Pfam PF00561 alpha/beta hydrolase fold 22 130 6.5E-17 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS10690 fe8ded25ca6e47bbf46ea430c256daa3 259 SUPERFAMILY SSF53474 1 258 7.63E-70 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS10690 fe8ded25ca6e47bbf46ea430c256daa3 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 5.2E-7 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS10690 fe8ded25ca6e47bbf46ea430c256daa3 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 5.2E-7 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS10690 fe8ded25ca6e47bbf46ea430c256daa3 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 5.2E-7 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS10690 fe8ded25ca6e47bbf46ea430c256daa3 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 204 218 5.2E-7 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS10690 fe8ded25ca6e47bbf46ea430c256daa3 259 PANTHER PTHR10992 11 259 7.7E-68 T 23-04-2016 RR42_RS01135 1958d84b8329981d4e6fb91cc1daa872 219 PANTHER PTHR30055:SF58 22 217 3.3E-60 T 23-04-2016 RR42_RS01135 1958d84b8329981d4e6fb91cc1daa872 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 55 84 2.7E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS01135 1958d84b8329981d4e6fb91cc1daa872 219 SUPERFAMILY SSF48498 108 218 4.88E-14 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RR42_RS01135 1958d84b8329981d4e6fb91cc1daa872 219 SUPERFAMILY SSF46689 27 101 1.4E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS01135 1958d84b8329981d4e6fb91cc1daa872 219 Gene3D G3DSA:1.10.357.10 28 218 2.1E-44 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS01135 1958d84b8329981d4e6fb91cc1daa872 219 PANTHER PTHR30055 22 217 3.3E-60 T 23-04-2016 RR42_RS16245 faad196d0f1f3ed9534913aee40ddedd 256 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 7 21 - T 23-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 RR42_RS16245 faad196d0f1f3ed9534913aee40ddedd 256 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 209 3.2E-45 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RR42_RS16245 faad196d0f1f3ed9534913aee40ddedd 256 SUPERFAMILY SSF53790 1 235 7.98E-61 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RR42_RS16245 faad196d0f1f3ed9534913aee40ddedd 256 Gene3D G3DSA:3.40.1010.10 1 116 4.1E-41 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 RR42_RS16245 faad196d0f1f3ed9534913aee40ddedd 256 PANTHER PTHR21091:SF16 1 210 5.0E-58 T 23-04-2016 RR42_RS16245 faad196d0f1f3ed9534913aee40ddedd 256 PANTHER PTHR21091 1 210 5.0E-58 T 23-04-2016 RR42_RS16245 faad196d0f1f3ed9534913aee40ddedd 256 Gene3D G3DSA:3.30.950.10 117 237 3.3E-28 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 RR42_RS16245 faad196d0f1f3ed9534913aee40ddedd 256 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 81 114 - T 23-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 RR42_RS16245 faad196d0f1f3ed9534913aee40ddedd 256 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 2 233 9.5E-85 T 23-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 RR42_RS05070 c0cd5774e98a92549d2b9f08291e227f 482 PANTHER PTHR11785 20 468 4.1E-226 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RR42_RS05070 c0cd5774e98a92549d2b9f08291e227f 482 Pfam PF00324 Amino acid permease 33 446 2.3E-92 T 23-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RR42_RS05070 c0cd5774e98a92549d2b9f08291e227f 482 ProSitePatterns PS00218 Amino acid permeases signature. 57 87 - T 23-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RR42_RS05070 c0cd5774e98a92549d2b9f08291e227f 482 PANTHER PTHR11785:SF317 20 468 4.1E-226 T 23-04-2016 RR42_RS05070 c0cd5774e98a92549d2b9f08291e227f 482 PIRSF PIRSF006060 14 481 1.9E-67 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RR42_RS13840 c7416e8376e3e701166d9306e2c16811 430 PANTHER PTHR22935:SF77 5 428 1.5E-101 T 23-04-2016 RR42_RS13840 c7416e8376e3e701166d9306e2c16811 430 Pfam PF00144 Beta-lactamase 50 418 2.0E-74 T 23-04-2016 IPR001466 Beta-lactamase-related RR42_RS13840 c7416e8376e3e701166d9306e2c16811 430 Gene3D G3DSA:3.40.710.10 34 411 7.6E-94 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS13840 c7416e8376e3e701166d9306e2c16811 430 PANTHER PTHR22935 5 428 1.5E-101 T 23-04-2016 RR42_RS13840 c7416e8376e3e701166d9306e2c16811 430 SUPERFAMILY SSF56601 45 422 1.21E-96 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS06435 149d4d3ec33e1b51e3b36d849bc56fdc 473 Pfam PF02913 FAD linked oxidases, C-terminal domain 222 472 3.8E-52 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RR42_RS06435 149d4d3ec33e1b51e3b36d849bc56fdc 473 Gene3D G3DSA:3.30.43.10 3 100 1.4E-27 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RR42_RS06435 149d4d3ec33e1b51e3b36d849bc56fdc 473 SUPERFAMILY SSF56176 8 222 2.19E-78 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RR42_RS06435 149d4d3ec33e1b51e3b36d849bc56fdc 473 PANTHER PTHR11748:SF76 18 473 4.8E-196 T 23-04-2016 RR42_RS06435 149d4d3ec33e1b51e3b36d849bc56fdc 473 SUPERFAMILY SSF55103 199 472 2.94E-58 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RR42_RS06435 149d4d3ec33e1b51e3b36d849bc56fdc 473 Gene3D G3DSA:1.10.45.10 433 472 3.8E-13 T 23-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RR42_RS06435 149d4d3ec33e1b51e3b36d849bc56fdc 473 PANTHER PTHR11748 18 473 4.8E-196 T 23-04-2016 RR42_RS06435 149d4d3ec33e1b51e3b36d849bc56fdc 473 Pfam PF01565 FAD binding domain 46 182 3.0E-38 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RR42_RS06435 149d4d3ec33e1b51e3b36d849bc56fdc 473 Gene3D G3DSA:3.30.465.10 101 222 1.0E-39 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RR42_RS12225 126501dd672f0e8e25c4af69d844ed92 276 PANTHER PTHR26402:SF524 3 124 7.6E-43 T 23-04-2016 RR42_RS12225 126501dd672f0e8e25c4af69d844ed92 276 SMART SM00448 3 115 7.7E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS12225 126501dd672f0e8e25c4af69d844ed92 276 Gene3D G3DSA:3.40.50.2300 3 127 1.2E-31 T 23-04-2016 RR42_RS12225 126501dd672f0e8e25c4af69d844ed92 276 Pfam PF00072 Response regulator receiver domain 6 115 2.0E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS12225 126501dd672f0e8e25c4af69d844ed92 276 Pfam PF04397 LytTr DNA-binding domain 181 275 5.5E-24 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 RR42_RS12225 126501dd672f0e8e25c4af69d844ed92 276 PANTHER PTHR26402 3 124 7.6E-43 T 23-04-2016 RR42_RS12225 126501dd672f0e8e25c4af69d844ed92 276 SUPERFAMILY SSF52172 3 127 4.13E-32 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS12225 126501dd672f0e8e25c4af69d844ed92 276 SMART SM00850 180 276 1.0E-23 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 RR42_RS12225 126501dd672f0e8e25c4af69d844ed92 276 Gene3D G3DSA:2.40.50.40 172 239 1.4E-17 T 23-04-2016 RR42_RS06825 39cc9f0510d2e7d36e280d84b6fac89b 294 PANTHER PTHR41328 37 127 2.8E-12 T 23-04-2016 RR42_RS06825 39cc9f0510d2e7d36e280d84b6fac89b 294 Pfam PF03592 Terminase small subunit 41 256 3.6E-31 T 23-04-2016 IPR005335 Terminase small subunit GO:0006323 RR42_RS06825 39cc9f0510d2e7d36e280d84b6fac89b 294 PANTHER PTHR41328:SF2 37 127 2.8E-12 T 23-04-2016 RR42_RS10630 7f4aef5ef94454ff6d6bfd8beea4fdba 116 PANTHER PTHR30218 9 115 1.0E-24 T 23-04-2016 RR42_RS10630 7f4aef5ef94454ff6d6bfd8beea4fdba 116 SUPERFAMILY SSF140356 23 115 2.62E-29 T 23-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 RR42_RS10630 7f4aef5ef94454ff6d6bfd8beea4fdba 116 Pfam PF13089 Polyphosphate kinase N-terminal domain 25 115 4.8E-27 T 23-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 RR42_RS10630 7f4aef5ef94454ff6d6bfd8beea4fdba 116 PANTHER PTHR30218:SF0 9 115 1.0E-24 T 23-04-2016 RR42_RS10630 7f4aef5ef94454ff6d6bfd8beea4fdba 116 Gene3D G3DSA:1.20.58.310 20 102 2.2E-27 T 23-04-2016 RR42_RS06455 193714ca4eb986a816e784b96ff202b5 105 Pfam PF06127 Protein of unknown function (DUF962) 9 102 4.2E-37 T 23-04-2016 IPR009305 Protein of unknown function DUF962 RR42_RS06455 193714ca4eb986a816e784b96ff202b5 105 PANTHER PTHR34205 1 103 2.2E-45 T 23-04-2016 RR42_RS10840 0e7febab4e59bcb084aa493913a56ebb 197 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 19 193 2.5E-68 T 23-04-2016 IPR010195 Uncharacterised peroxidase-related RR42_RS10840 0e7febab4e59bcb084aa493913a56ebb 197 Gene3D G3DSA:1.20.1290.10 77 192 2.3E-37 T 23-04-2016 IPR029032 AhpD-like RR42_RS10840 0e7febab4e59bcb084aa493913a56ebb 197 PANTHER PTHR35446:SF2 10 190 1.7E-35 T 23-04-2016 RR42_RS10840 0e7febab4e59bcb084aa493913a56ebb 197 PANTHER PTHR35446 10 190 1.7E-35 T 23-04-2016 RR42_RS10840 0e7febab4e59bcb084aa493913a56ebb 197 Pfam PF02627 Carboxymuconolactone decarboxylase family 57 126 1.9E-11 T 23-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RR42_RS10840 0e7febab4e59bcb084aa493913a56ebb 197 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 76 104 6.6E-9 T 23-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RR42_RS10840 0e7febab4e59bcb084aa493913a56ebb 197 SUPERFAMILY SSF69118 13 191 2.99E-46 T 23-04-2016 IPR029032 AhpD-like RR42_RS17660 ff70d887e69523e0aab567a82df48aa3 246 SUPERFAMILY SSF51735 4 246 4.69E-86 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS17660 ff70d887e69523e0aab567a82df48aa3 246 PANTHER PTHR24322 10 138 2.9E-61 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS17660 ff70d887e69523e0aab567a82df48aa3 246 PANTHER PTHR24322 154 186 2.9E-61 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS17660 ff70d887e69523e0aab567a82df48aa3 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 7.5E-14 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS17660 ff70d887e69523e0aab567a82df48aa3 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 7.5E-14 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS17660 ff70d887e69523e0aab567a82df48aa3 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 7.5E-14 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS17660 ff70d887e69523e0aab567a82df48aa3 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 6.9E-70 T 23-04-2016 RR42_RS17660 ff70d887e69523e0aab567a82df48aa3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.9E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS17660 ff70d887e69523e0aab567a82df48aa3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 5.9E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS17660 ff70d887e69523e0aab567a82df48aa3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 5.9E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS17660 ff70d887e69523e0aab567a82df48aa3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 5.9E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS17660 ff70d887e69523e0aab567a82df48aa3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 5.9E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS17660 ff70d887e69523e0aab567a82df48aa3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 5.9E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS17660 ff70d887e69523e0aab567a82df48aa3 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RR42_RS17660 ff70d887e69523e0aab567a82df48aa3 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 185 1.7E-4 T 23-04-2016 RR42_RS17660 ff70d887e69523e0aab567a82df48aa3 246 Gene3D G3DSA:3.40.50.720 2 246 3.2E-92 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS17660 ff70d887e69523e0aab567a82df48aa3 246 PANTHER PTHR24322:SF328 10 138 2.9E-61 T 23-04-2016 RR42_RS17660 ff70d887e69523e0aab567a82df48aa3 246 PANTHER PTHR24322:SF328 154 186 2.9E-61 T 23-04-2016 RR42_RS29920 fda37dff5180f31a3b620dfd8b9ba21d 121 SUPERFAMILY SSF53271 2 121 6.45E-24 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS29920 fda37dff5180f31a3b620dfd8b9ba21d 121 PANTHER PTHR31299 11 121 7.6E-25 T 23-04-2016 RR42_RS29920 fda37dff5180f31a3b620dfd8b9ba21d 121 Pfam PF00156 Phosphoribosyl transferase domain 4 121 1.7E-19 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RR42_RS29920 fda37dff5180f31a3b620dfd8b9ba21d 121 Gene3D G3DSA:3.40.50.2020 7 121 1.2E-16 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS09540 7bfe04bf242e01fb2ec12b96fd8886a5 186 Pfam PF05951 Bacterial protein of unknown function (DUF882) 38 186 1.4E-50 T 23-04-2016 IPR010275 Protein of unknown function DUF882 RR42_RS09540 7bfe04bf242e01fb2ec12b96fd8886a5 186 PANTHER PTHR37425 9 186 5.0E-45 T 23-04-2016 RR42_RS09540 7bfe04bf242e01fb2ec12b96fd8886a5 186 SUPERFAMILY SSF55166 70 186 3.14E-32 T 23-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain RR42_RS09540 7bfe04bf242e01fb2ec12b96fd8886a5 186 Gene3D G3DSA:3.30.1380.10 73 186 5.1E-28 T 23-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain RR42_RS08655 a70ba5692f6201611cbbefb38ad2da4f 351 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 55 333 1.2E-81 T 23-04-2016 IPR006430 Phage portal protein PBSX family RR42_RS08655 a70ba5692f6201611cbbefb38ad2da4f 351 PIRSF PIRSF018494 1 347 5.8E-159 T 23-04-2016 IPR030935 Phage portal protein PBSX family, Proteobacteria RR42_RS08655 a70ba5692f6201611cbbefb38ad2da4f 351 Pfam PF04860 Phage portal protein 100 330 2.8E-12 T 23-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein RR42_RS13455 fddd54f83d0bedd1e8343ae427e9d3ca 262 PANTHER PTHR24220:SF560 17 257 2.2E-168 T 23-04-2016 RR42_RS13455 fddd54f83d0bedd1e8343ae427e9d3ca 262 SMART SM00382 40 234 3.1E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS13455 fddd54f83d0bedd1e8343ae427e9d3ca 262 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS13455 fddd54f83d0bedd1e8343ae427e9d3ca 262 SUPERFAMILY SSF52540 16 246 1.82E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13455 fddd54f83d0bedd1e8343ae427e9d3ca 262 Gene3D G3DSA:3.40.50.300 16 256 2.3E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13455 fddd54f83d0bedd1e8343ae427e9d3ca 262 PANTHER PTHR24220 17 257 2.2E-168 T 23-04-2016 RR42_RS13455 fddd54f83d0bedd1e8343ae427e9d3ca 262 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 16 262 3.9E-120 T 23-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 RR42_RS13455 fddd54f83d0bedd1e8343ae427e9d3ca 262 Pfam PF00005 ABC transporter 31 186 2.9E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS14075 ed04836ad6f0e14987b6f1b75ef1de67 209 SUPERFAMILY SSF89069 15 82 1.57E-13 T 23-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 RR42_RS14075 ed04836ad6f0e14987b6f1b75ef1de67 209 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 15 95 2.1E-15 T 23-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 RR42_RS00920 584a82d980712466bbaa18789b06b805 301 Gene3D G3DSA:3.40.50.1820 62 257 1.9E-28 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS00920 584a82d980712466bbaa18789b06b805 301 Pfam PF00326 Prolyl oligopeptidase family 103 180 6.8E-11 T 23-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 RR42_RS00920 584a82d980712466bbaa18789b06b805 301 SUPERFAMILY SSF53474 61 292 6.01E-29 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS15380 6ca3f39f70d3014bbf5886ab3645eb4c 221 Hamap MF_01969 Kynurenine formamidase [kynB]. 15 220 43.83 T 23-04-2016 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 RR42_RS15380 6ca3f39f70d3014bbf5886ab3645eb4c 221 PANTHER PTHR31118 13 217 8.8E-41 T 23-04-2016 RR42_RS15380 6ca3f39f70d3014bbf5886ab3645eb4c 221 TIGRFAM TIGR03035 trp_arylform: arylformamidase 16 220 1.4E-99 T 23-04-2016 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 RR42_RS15380 6ca3f39f70d3014bbf5886ab3645eb4c 221 SUPERFAMILY SSF102198 14 218 9.94E-58 T 23-04-2016 RR42_RS15380 6ca3f39f70d3014bbf5886ab3645eb4c 221 Pfam PF04199 Putative cyclase 18 163 1.2E-16 T 23-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 RR42_RS15380 6ca3f39f70d3014bbf5886ab3645eb4c 221 Gene3D G3DSA:3.50.30.50 14 217 3.6E-54 T 23-04-2016 RR42_RS10600 faaadc839747eceab1541807e6b9b957 343 PANTHER PTHR33376 3 343 5.3E-77 T 23-04-2016 RR42_RS10600 faaadc839747eceab1541807e6b9b957 343 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 45 295 1.3E-53 T 23-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 RR42_RS10600 faaadc839747eceab1541807e6b9b957 343 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 53 318 7.4E-62 T 23-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 RR42_RS10600 faaadc839747eceab1541807e6b9b957 343 PIRSF PIRSF006470 5 338 1.7E-66 T 23-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 RR42_RS10600 faaadc839747eceab1541807e6b9b957 343 PANTHER PTHR33376:SF2 3 343 5.3E-77 T 23-04-2016 RR42_RS05255 0825d541cd779109809028574da5f97d 316 Gene3D G3DSA:3.20.20.370 5 311 3.5E-105 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RR42_RS05255 0825d541cd779109809028574da5f97d 316 Pfam PF01522 Polysaccharide deacetylase 76 163 1.4E-11 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RR42_RS05255 0825d541cd779109809028574da5f97d 316 SUPERFAMILY SSF88713 5 310 5.0E-88 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RR42_RS05255 0825d541cd779109809028574da5f97d 316 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 6 310 6.4E-157 T 23-04-2016 IPR017625 Putative urate catabolism protein RR42_RS05255 0825d541cd779109809028574da5f97d 316 PANTHER PTHR10587 11 308 3.5E-149 T 23-04-2016 RR42_RS05255 0825d541cd779109809028574da5f97d 316 PANTHER PTHR10587:SF72 11 308 3.5E-149 T 23-04-2016 RR42_RS10910 224d8e4c897bfb0e2854aec1d381510c 331 PANTHER PTHR30518 1 329 4.6E-88 T 23-04-2016 RR42_RS10910 224d8e4c897bfb0e2854aec1d381510c 331 Gene3D G3DSA:3.30.160.60 299 329 8.1E-16 T 23-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 RR42_RS10910 224d8e4c897bfb0e2854aec1d381510c 331 PANTHER PTHR30518:SF2 1 329 4.6E-88 T 23-04-2016 RR42_RS10910 224d8e4c897bfb0e2854aec1d381510c 331 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 1 329 1.8E-81 T 23-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like RR42_RS10910 224d8e4c897bfb0e2854aec1d381510c 331 Pfam PF02618 YceG-like family 40 326 1.5E-79 T 23-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like RR42_RS10090 6d1f1ea3b0ef753eb1ec37d84f391c4a 273 Gene3D G3DSA:3.90.470.20 32 147 1.6E-25 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RR42_RS10090 6d1f1ea3b0ef753eb1ec37d84f391c4a 273 SUPERFAMILY SSF56214 135 243 7.72E-13 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RR42_RS10090 6d1f1ea3b0ef753eb1ec37d84f391c4a 273 PANTHER PTHR12215 5 202 1.3E-28 T 23-04-2016 RR42_RS10090 6d1f1ea3b0ef753eb1ec37d84f391c4a 273 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 135 196 6.5E-9 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RR42_RS10090 6d1f1ea3b0ef753eb1ec37d84f391c4a 273 Gene3D G3DSA:3.90.470.20 148 242 4.6E-11 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RR42_RS10090 6d1f1ea3b0ef753eb1ec37d84f391c4a 273 SUPERFAMILY SSF56214 43 127 4.84E-18 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RR42_RS20785 88b0dc1bbbf698c6f2c423ad3f02921a 391 Pfam PF01757 Acyltransferase family 7 319 1.3E-18 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 RR42_RS20785 88b0dc1bbbf698c6f2c423ad3f02921a 391 PANTHER PTHR23028:SF53 2 358 2.7E-39 T 23-04-2016 RR42_RS20785 88b0dc1bbbf698c6f2c423ad3f02921a 391 PANTHER PTHR23028 2 358 2.7E-39 T 23-04-2016 RR42_RS36275 1a27ca96618615526244e8d80af89782 332 PANTHER PTHR30349:SF16 183 325 6.8E-18 T 23-04-2016 RR42_RS36275 1a27ca96618615526244e8d80af89782 332 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 268 326 6.8E-10 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS36275 1a27ca96618615526244e8d80af89782 332 PANTHER PTHR30349 183 325 6.8E-18 T 23-04-2016 RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 PANTHER PTHR32063:SF13 1 1032 0.0 T 23-04-2016 RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 SUPERFAMILY SSF82693 38 128 1.02E-21 T 23-04-2016 RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 PRINTS PR00702 Acriflavin resistance protein family signature 469 492 5.8E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 5.8E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 5.8E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 PRINTS PR00702 Acriflavin resistance protein family signature 548 565 5.8E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 5.8E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 PRINTS PR00702 Acriflavin resistance protein family signature 616 630 5.8E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 5.8E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 5.8E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 PRINTS PR00702 Acriflavin resistance protein family signature 444 467 5.8E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 SUPERFAMILY SSF82714 719 805 3.01E-16 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 Gene3D G3DSA:3.30.70.1430 38 139 2.1E-28 T 23-04-2016 RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 PANTHER PTHR32063 1 1032 0.0 T 23-04-2016 RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 SUPERFAMILY SSF82866 805 1026 4.05E-41 T 23-04-2016 RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 SUPERFAMILY SSF82693 273 328 3.49E-18 T 23-04-2016 RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 SUPERFAMILY SSF82866 295 496 3.4E-46 T 23-04-2016 RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 Gene3D G3DSA:3.30.70.1430 564 651 2.0E-15 T 23-04-2016 RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 Gene3D G3DSA:1.20.1640.10 293 503 8.9E-55 T 23-04-2016 RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 Gene3D G3DSA:3.30.2090.10 180 274 2.4E-25 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 Gene3D G3DSA:3.30.2090.10 719 807 5.6E-18 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1027 0.0 T 23-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 SUPERFAMILY SSF82693 561 652 7.32E-14 T 23-04-2016 RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 Pfam PF00873 AcrB/AcrD/AcrF family 1 1022 0.0 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 Gene3D G3DSA:1.10.3850.10 811 1025 3.9E-54 T 23-04-2016 RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 SUPERFAMILY SSF82693 136 181 3.49E-18 T 23-04-2016 RR42_RS19885 a423320cb338020c96e6e353a70e698a 1032 SUPERFAMILY SSF82714 181 270 1.1E-20 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RR42_RS17300 62f078c1829d6b2cf4bfb2291d2ac9f6 497 Gene3D G3DSA:1.10.45.10 430 469 1.5E-5 T 23-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RR42_RS17300 62f078c1829d6b2cf4bfb2291d2ac9f6 497 Gene3D G3DSA:3.30.43.10 14 107 5.1E-25 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RR42_RS17300 62f078c1829d6b2cf4bfb2291d2ac9f6 497 SUPERFAMILY SSF56176 17 229 3.18E-66 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RR42_RS17300 62f078c1829d6b2cf4bfb2291d2ac9f6 497 SUPERFAMILY SSF55103 203 472 3.27E-70 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RR42_RS17300 62f078c1829d6b2cf4bfb2291d2ac9f6 497 Pfam PF02913 FAD linked oxidases, C-terminal domain 228 468 1.3E-62 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RR42_RS17300 62f078c1829d6b2cf4bfb2291d2ac9f6 497 PANTHER PTHR11748 14 488 1.3E-184 T 23-04-2016 RR42_RS17300 62f078c1829d6b2cf4bfb2291d2ac9f6 497 PANTHER PTHR11748:SF78 14 488 1.3E-184 T 23-04-2016 RR42_RS17300 62f078c1829d6b2cf4bfb2291d2ac9f6 497 Pfam PF01565 FAD binding domain 54 192 5.3E-39 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RR42_RS17300 62f078c1829d6b2cf4bfb2291d2ac9f6 497 Gene3D G3DSA:3.30.465.10 109 229 1.3E-30 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RR42_RS11805 331b1468d4fb79ecc6484055c6ee8401 236 SUPERFAMILY SSF53098 25 215 7.13E-67 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS11805 331b1468d4fb79ecc6484055c6ee8401 236 Pfam PF01351 Ribonuclease HII 31 210 4.2E-37 T 23-04-2016 IPR024567 Ribonuclease HII/HIII domain RR42_RS11805 331b1468d4fb79ecc6484055c6ee8401 236 PANTHER PTHR10954 28 221 1.0E-75 T 23-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 RR42_RS11805 331b1468d4fb79ecc6484055c6ee8401 236 Hamap MF_00052_B Ribonuclease HII [rnhB]. 29 211 36.257 T 23-04-2016 IPR022898 Ribonuclease HII GO:0004523 RR42_RS11805 331b1468d4fb79ecc6484055c6ee8401 236 Gene3D G3DSA:3.30.420.10 29 169 1.3E-47 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS14985 37cdd552320975fe77384f40ce2cbced 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 57 3.0E-9 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RR42_RS14985 37cdd552320975fe77384f40ce2cbced 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 20.611 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RR42_RS14985 37cdd552320975fe77384f40ce2cbced 70 Pfam PF01165 Ribosomal protein S21 3 57 1.7E-20 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RR42_RS14985 37cdd552320975fe77384f40ce2cbced 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.79E-14 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RR42_RS14985 37cdd552320975fe77384f40ce2cbced 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.79E-14 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RR42_RS14985 37cdd552320975fe77384f40ce2cbced 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.79E-14 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RR42_RS14985 37cdd552320975fe77384f40ce2cbced 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.79E-14 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RR42_RS14985 37cdd552320975fe77384f40ce2cbced 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 3.0E-23 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RR42_RS14985 37cdd552320975fe77384f40ce2cbced 70 PANTHER PTHR21109 1 67 9.2E-21 T 23-04-2016 RR42_RS18635 bf6d00a6bacfc4e547a691dbb6529a04 334 Pfam PF01522 Polysaccharide deacetylase 108 216 1.9E-18 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RR42_RS18635 bf6d00a6bacfc4e547a691dbb6529a04 334 Gene3D G3DSA:3.20.20.370 60 323 7.0E-69 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RR42_RS18635 bf6d00a6bacfc4e547a691dbb6529a04 334 SUPERFAMILY SSF88713 59 324 1.24E-56 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RR42_RS18635 bf6d00a6bacfc4e547a691dbb6529a04 334 PANTHER PTHR10587 105 333 5.6E-53 T 23-04-2016 RR42_RS18635 bf6d00a6bacfc4e547a691dbb6529a04 334 PANTHER PTHR10587:SF71 105 333 5.6E-53 T 23-04-2016 RR42_RS36840 95cf7788cb2e92add0eb26ac83c8a63c 229 Pfam PF00764 Arginosuccinate synthase 1 229 1.2E-78 T 23-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RR42_RS36840 95cf7788cb2e92add0eb26ac83c8a63c 229 Gene3D G3DSA:3.90.1260.10 19 229 5.7E-94 T 23-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RR42_RS36840 95cf7788cb2e92add0eb26ac83c8a63c 229 PANTHER PTHR11587 1 229 1.6E-115 T 23-04-2016 RR42_RS36840 95cf7788cb2e92add0eb26ac83c8a63c 229 SUPERFAMILY SSF69864 18 229 8.63E-89 T 23-04-2016 RR42_RS36840 95cf7788cb2e92add0eb26ac83c8a63c 229 PANTHER PTHR11587:SF2 1 229 1.6E-115 T 23-04-2016 RR42_RS00610 8d11dce8ce0d32014602978581436950 222 PANTHER PTHR38765 1 220 1.9E-21 T 23-04-2016 RR42_RS00610 8d11dce8ce0d32014602978581436950 222 Pfam PF04340 Protein of unknown function, DUF484 2 220 9.8E-31 T 23-04-2016 IPR007435 Protein of unknown function DUF484 RR42_RS08720 4f494f1a7dae4ecf36f30546aa320b33 321 SUPERFAMILY SSF53474 41 320 1.46E-62 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS08720 4f494f1a7dae4ecf36f30546aa320b33 321 PANTHER PTHR23024 69 317 1.6E-87 T 23-04-2016 RR42_RS08720 4f494f1a7dae4ecf36f30546aa320b33 321 PANTHER PTHR23024:SF128 69 317 1.6E-87 T 23-04-2016 RR42_RS08720 4f494f1a7dae4ecf36f30546aa320b33 321 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 86 102 - T 23-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 RR42_RS08720 4f494f1a7dae4ecf36f30546aa320b33 321 Pfam PF07859 alpha/beta hydrolase fold 87 293 7.4E-69 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RR42_RS08720 4f494f1a7dae4ecf36f30546aa320b33 321 Gene3D G3DSA:3.40.50.1820 3 320 1.4E-87 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS16275 7c5c45f27a0db8794dede7ec13408935 257 PANTHER PTHR30269:SF2 1 256 8.9E-59 T 23-04-2016 RR42_RS16275 7c5c45f27a0db8794dede7ec13408935 257 Pfam PF01925 Sulfite exporter TauE/SafE 7 255 1.4E-45 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RR42_RS16275 7c5c45f27a0db8794dede7ec13408935 257 PANTHER PTHR30269 1 256 8.9E-59 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RR42_RS15410 619ffcca86855d6691763e2ebd0ef028 91 PANTHER PTHR35893 1 91 1.3E-24 T 23-04-2016 RR42_RS15410 619ffcca86855d6691763e2ebd0ef028 91 PANTHER PTHR35893:SF3 1 91 1.3E-24 T 23-04-2016 RR42_RS15410 619ffcca86855d6691763e2ebd0ef028 91 Pfam PF05957 Bacterial protein of unknown function (DUF883) 2 91 2.9E-33 T 23-04-2016 IPR010279 Protein of unknown function DUF883, ElaB RR42_RS12655 f6b1d37a4135bd2c93dcfb7d773943a2 157 PIRSF PIRSF021700 1 156 6.5E-63 T 23-04-2016 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase RR42_RS12655 f6b1d37a4135bd2c93dcfb7d773943a2 157 PANTHER PTHR33990 1 157 8.9E-74 T 23-04-2016 RR42_RS12655 f6b1d37a4135bd2c93dcfb7d773943a2 157 Gene3D G3DSA:3.10.180.10 1 128 1.9E-48 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS12655 f6b1d37a4135bd2c93dcfb7d773943a2 157 PANTHER PTHR33990:SF2 1 157 8.9E-74 T 23-04-2016 RR42_RS12655 f6b1d37a4135bd2c93dcfb7d773943a2 157 SUPERFAMILY SSF54593 3 154 1.9E-49 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS12655 f6b1d37a4135bd2c93dcfb7d773943a2 157 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 2 116 4.4E-47 T 23-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase RR42_RS16255 29ba56f69d10a4ffc2244cb57b80a8cd 320 PIRSF PIRSF002936 15 320 8.0E-135 T 23-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 RR42_RS16255 29ba56f69d10a4ffc2244cb57b80a8cd 320 SUPERFAMILY SSF52402 18 228 5.35E-61 T 23-04-2016 RR42_RS16255 29ba56f69d10a4ffc2244cb57b80a8cd 320 PANTHER PTHR23293:SF6 262 320 3.2E-67 T 23-04-2016 RR42_RS16255 29ba56f69d10a4ffc2244cb57b80a8cd 320 PANTHER PTHR23293:SF6 18 176 3.2E-67 T 23-04-2016 RR42_RS16255 29ba56f69d10a4ffc2244cb57b80a8cd 320 PANTHER PTHR23293:SF6 196 229 3.2E-67 T 23-04-2016 RR42_RS16255 29ba56f69d10a4ffc2244cb57b80a8cd 320 PANTHER PTHR23293 262 320 3.2E-67 T 23-04-2016 RR42_RS16255 29ba56f69d10a4ffc2244cb57b80a8cd 320 PANTHER PTHR23293 18 176 3.2E-67 T 23-04-2016 RR42_RS16255 29ba56f69d10a4ffc2244cb57b80a8cd 320 PANTHER PTHR23293 196 229 3.2E-67 T 23-04-2016 RR42_RS16255 29ba56f69d10a4ffc2244cb57b80a8cd 320 Gene3D G3DSA:3.40.50.620 261 269 1.8E-52 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS16255 29ba56f69d10a4ffc2244cb57b80a8cd 320 Gene3D G3DSA:3.40.50.620 12 228 1.8E-52 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS16255 29ba56f69d10a4ffc2244cb57b80a8cd 320 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 44 273 2.2E-45 T 23-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 RR42_RS03780 ce43036f41b06fcf2edda523dffb6571 349 Pfam PF02615 Malate/L-lactate dehydrogenase 4 335 1.5E-99 T 23-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 RR42_RS03780 ce43036f41b06fcf2edda523dffb6571 349 SUPERFAMILY SSF89733 1 346 4.58E-100 T 23-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 RR42_RS03780 ce43036f41b06fcf2edda523dffb6571 349 Gene3D G3DSA:1.10.1530.10 1 71 9.5E-21 T 23-04-2016 RR42_RS03780 ce43036f41b06fcf2edda523dffb6571 349 Gene3D G3DSA:3.30.1370.60 72 276 1.3E-70 T 23-04-2016 RR42_RS03780 ce43036f41b06fcf2edda523dffb6571 349 PANTHER PTHR11091 1 348 1.3E-76 T 23-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 RR42_RS18510 e441595ebd092a4661d4fc9f84e1df76 149 PANTHER PTHR30154 1 147 1.7E-35 T 23-04-2016 RR42_RS18510 e441595ebd092a4661d4fc9f84e1df76 149 Gene3D G3DSA:1.10.10.10 1 54 4.3E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS18510 e441595ebd092a4661d4fc9f84e1df76 149 Gene3D G3DSA:3.30.70.920 68 139 4.6E-18 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RR42_RS18510 e441595ebd092a4661d4fc9f84e1df76 149 SUPERFAMILY SSF46785 3 59 2.57E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS18510 e441595ebd092a4661d4fc9f84e1df76 149 Pfam PF13404 AsnC-type helix-turn-helix domain 4 45 5.9E-13 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS18510 e441595ebd092a4661d4fc9f84e1df76 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 1.0E-12 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS18510 e441595ebd092a4661d4fc9f84e1df76 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 1.0E-12 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS18510 e441595ebd092a4661d4fc9f84e1df76 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 1.0E-12 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS18510 e441595ebd092a4661d4fc9f84e1df76 149 SMART SM00344 4 110 4.6E-22 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RR42_RS18510 e441595ebd092a4661d4fc9f84e1df76 149 SUPERFAMILY SSF54909 66 145 1.61E-15 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RR42_RS18510 e441595ebd092a4661d4fc9f84e1df76 149 Pfam PF01037 Lrp/AsnC ligand binding domain 79 139 9.3E-15 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RR42_RS14805 50094563dadc386c0d1b927e6848b9eb 313 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 11 280 6.4E-117 T 23-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 RR42_RS14805 50094563dadc386c0d1b927e6848b9eb 313 SUPERFAMILY SSF52374 11 268 3.75E-82 T 23-04-2016 RR42_RS14805 50094563dadc386c0d1b927e6848b9eb 313 PANTHER PTHR11451:SF35 297 312 1.2E-86 T 23-04-2016 RR42_RS14805 50094563dadc386c0d1b927e6848b9eb 313 PANTHER PTHR11451:SF35 9 238 1.2E-86 T 23-04-2016 RR42_RS14805 50094563dadc386c0d1b927e6848b9eb 313 PRINTS PR00987 Glutamyl-tRNA synthetase signature 203 211 1.2E-14 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RR42_RS14805 50094563dadc386c0d1b927e6848b9eb 313 PRINTS PR00987 Glutamyl-tRNA synthetase signature 14 26 1.2E-14 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RR42_RS14805 50094563dadc386c0d1b927e6848b9eb 313 PRINTS PR00987 Glutamyl-tRNA synthetase signature 43 56 1.2E-14 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RR42_RS14805 50094563dadc386c0d1b927e6848b9eb 313 PRINTS PR00987 Glutamyl-tRNA synthetase signature 187 197 1.2E-14 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RR42_RS14805 50094563dadc386c0d1b927e6848b9eb 313 PRINTS PR00987 Glutamyl-tRNA synthetase signature 28 39 1.2E-14 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RR42_RS14805 50094563dadc386c0d1b927e6848b9eb 313 Gene3D G3DSA:3.40.50.620 11 75 1.1E-40 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS14805 50094563dadc386c0d1b927e6848b9eb 313 Gene3D G3DSA:3.40.50.620 189 238 1.1E-40 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS14805 50094563dadc386c0d1b927e6848b9eb 313 Gene3D G3DSA:3.90.800.10 76 187 4.8E-17 T 23-04-2016 RR42_RS14805 50094563dadc386c0d1b927e6848b9eb 313 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 11 305 42.496 T 23-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 RR42_RS14805 50094563dadc386c0d1b927e6848b9eb 313 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 12 256 1.8E-40 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 RR42_RS14805 50094563dadc386c0d1b927e6848b9eb 313 PANTHER PTHR11451 297 312 1.2E-86 T 23-04-2016 RR42_RS14805 50094563dadc386c0d1b927e6848b9eb 313 PANTHER PTHR11451 9 238 1.2E-86 T 23-04-2016 RR42_RS34060 fa573cb904364d12150c6f7ea479b179 287 Pfam PF00005 ABC transporter 138 280 1.3E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS34060 fa573cb904364d12150c6f7ea479b179 287 PANTHER PTHR24220 123 287 8.6E-71 T 23-04-2016 RR42_RS34060 fa573cb904364d12150c6f7ea479b179 287 ProSitePatterns PS00211 ABC transporters family signature. 253 267 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS34060 fa573cb904364d12150c6f7ea479b179 287 SUPERFAMILY SSF52540 118 286 1.11E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS34060 fa573cb904364d12150c6f7ea479b179 287 Gene3D G3DSA:3.40.50.300 118 286 4.9E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS23140 aae0b5610c76e29f61b32a0977b2b93e 113 Gene3D G3DSA:3.90.550.10 2 111 1.9E-13 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RR42_RS23140 aae0b5610c76e29f61b32a0977b2b93e 113 Pfam PF12804 MobA-like NTP transferase domain 2 98 2.0E-20 T 23-04-2016 IPR025877 MobA-like NTP transferase RR42_RS23140 aae0b5610c76e29f61b32a0977b2b93e 113 SUPERFAMILY SSF53448 11 97 2.72E-9 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RR42_RS10715 1ea633ec39d18923613c3f3a33a565b6 200 Gene3D G3DSA:1.10.443.10 156 191 9.8E-6 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RR42_RS10715 1ea633ec39d18923613c3f3a33a565b6 200 SUPERFAMILY SSF56349 156 189 1.41E-5 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RR42_RS15160 67e01f4247aa2e2635e057664e5baafd 151 Pfam PF09980 Predicted membrane protein (DUF2214) 4 149 6.9E-52 T 23-04-2016 IPR018706 Protein of unknown function DUF2214, membrane RR42_RS16250 8ca6f606bf518e2d7177dbb5b67c95d2 434 SUPERFAMILY SSF50465 329 431 5.76E-31 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RR42_RS16250 8ca6f606bf518e2d7177dbb5b67c95d2 434 Gene3D G3DSA:3.40.50.300 7 224 1.8E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS16250 8ca6f606bf518e2d7177dbb5b67c95d2 434 Gene3D G3DSA:2.40.30.10 329 432 3.4E-9 T 23-04-2016 RR42_RS16250 8ca6f606bf518e2d7177dbb5b67c95d2 434 Pfam PF00009 Elongation factor Tu GTP binding domain 11 204 3.2E-37 T 23-04-2016 RR42_RS16250 8ca6f606bf518e2d7177dbb5b67c95d2 434 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 65 80 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site RR42_RS16250 8ca6f606bf518e2d7177dbb5b67c95d2 434 PRINTS PR00315 GTP-binding elongation factor signature 12 25 6.0E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS16250 8ca6f606bf518e2d7177dbb5b67c95d2 434 PRINTS PR00315 GTP-binding elongation factor signature 153 162 6.0E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS16250 8ca6f606bf518e2d7177dbb5b67c95d2 434 PRINTS PR00315 GTP-binding elongation factor signature 72 80 6.0E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS16250 8ca6f606bf518e2d7177dbb5b67c95d2 434 PRINTS PR00315 GTP-binding elongation factor signature 92 102 6.0E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS16250 8ca6f606bf518e2d7177dbb5b67c95d2 434 PRINTS PR00315 GTP-binding elongation factor signature 108 119 6.0E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RR42_RS16250 8ca6f606bf518e2d7177dbb5b67c95d2 434 SUPERFAMILY SSF52540 10 241 1.3E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS16250 8ca6f606bf518e2d7177dbb5b67c95d2 434 Gene3D G3DSA:2.40.30.10 234 321 3.0E-15 T 23-04-2016 RR42_RS16250 8ca6f606bf518e2d7177dbb5b67c95d2 434 SUPERFAMILY SSF50447 234 321 2.87E-15 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RR42_RS16250 8ca6f606bf518e2d7177dbb5b67c95d2 434 PANTHER PTHR23115 12 320 3.4E-59 T 23-04-2016 RR42_RS16250 8ca6f606bf518e2d7177dbb5b67c95d2 434 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 11 430 5.6E-160 T 23-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 RR42_RS03345 2345b42e45e12b44587532ff56a843b3 306 Gene3D G3DSA:1.10.150.130 15 106 2.1E-22 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal RR42_RS03345 2345b42e45e12b44587532ff56a843b3 306 SUPERFAMILY SSF47823 13 108 5.89E-29 T 23-04-2016 IPR010998 Integrase, Lambda-type, N-terminal RR42_RS03345 2345b42e45e12b44587532ff56a843b3 306 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 18 305 2.9E-110 T 23-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 RR42_RS03345 2345b42e45e12b44587532ff56a843b3 306 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 12 306 29.834 T 23-04-2016 IPR023009 Tyrosine recombinase XerC/XerD RR42_RS03345 2345b42e45e12b44587532ff56a843b3 306 Pfam PF00589 Phage integrase family 119 291 2.1E-51 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RR42_RS03345 2345b42e45e12b44587532ff56a843b3 306 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 16 98 4.4E-16 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RR42_RS03345 2345b42e45e12b44587532ff56a843b3 306 Gene3D G3DSA:1.10.443.10 120 297 2.0E-56 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RR42_RS03345 2345b42e45e12b44587532ff56a843b3 306 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 12 306 58.888 T 23-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 RR42_RS03345 2345b42e45e12b44587532ff56a843b3 306 SUPERFAMILY SSF56349 114 304 8.83E-56 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RR42_RS03345 2345b42e45e12b44587532ff56a843b3 306 PANTHER PTHR30349:SF5 15 305 2.5E-104 T 23-04-2016 RR42_RS03345 2345b42e45e12b44587532ff56a843b3 306 PANTHER PTHR30349 15 305 2.5E-104 T 23-04-2016 RR42_RS12135 4296c5a19ab6f16cc83ba80d2a00bb70 782 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 611 1.3E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS12135 4296c5a19ab6f16cc83ba80d2a00bb70 782 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 635 1.3E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS12135 4296c5a19ab6f16cc83ba80d2a00bb70 782 PRINTS PR00344 Bacterial sensor protein C-terminal signature 583 597 1.3E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS12135 4296c5a19ab6f16cc83ba80d2a00bb70 782 PRINTS PR00344 Bacterial sensor protein C-terminal signature 641 654 1.3E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS12135 4296c5a19ab6f16cc83ba80d2a00bb70 782 Gene3D G3DSA:3.30.565.10 497 657 3.3E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS12135 4296c5a19ab6f16cc83ba80d2a00bb70 782 SUPERFAMILY SSF55874 484 655 1.57E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS12135 4296c5a19ab6f16cc83ba80d2a00bb70 782 SMART SM00387 542 657 1.3E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS12135 4296c5a19ab6f16cc83ba80d2a00bb70 782 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 542 655 6.7E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS12135 4296c5a19ab6f16cc83ba80d2a00bb70 782 SMART SM00388 430 495 2.9E-21 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS12135 4296c5a19ab6f16cc83ba80d2a00bb70 782 PANTHER PTHR24423:SF382 22 31 1.9E-96 T 23-04-2016 RR42_RS12135 4296c5a19ab6f16cc83ba80d2a00bb70 782 PANTHER PTHR24423:SF382 318 657 1.9E-96 T 23-04-2016 RR42_RS12135 4296c5a19ab6f16cc83ba80d2a00bb70 782 Gene3D G3DSA:1.10.287.130 421 491 2.6E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS12135 4296c5a19ab6f16cc83ba80d2a00bb70 782 PANTHER PTHR24423 22 31 1.9E-96 T 23-04-2016 RR42_RS12135 4296c5a19ab6f16cc83ba80d2a00bb70 782 PANTHER PTHR24423 318 657 1.9E-96 T 23-04-2016 RR42_RS12135 4296c5a19ab6f16cc83ba80d2a00bb70 782 Pfam PF00512 His Kinase A (phospho-acceptor) domain 431 495 6.8E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS12135 4296c5a19ab6f16cc83ba80d2a00bb70 782 SUPERFAMILY SSF47384 415 496 1.88E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS19140 70306935ff3224bc94f3fb0263b907ff 121 PANTHER PTHR10871 1 115 2.1E-64 T 23-04-2016 RR42_RS19140 70306935ff3224bc94f3fb0263b907ff 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 23-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 RR42_RS19140 70306935ff3224bc94f3fb0263b907ff 121 SUPERFAMILY SSF46946 2 114 1.06E-44 T 23-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RR42_RS19140 70306935ff3224bc94f3fb0263b907ff 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 27.035 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19140 70306935ff3224bc94f3fb0263b907ff 121 Gene3D G3DSA:1.10.8.50 1 71 4.1E-29 T 23-04-2016 RR42_RS19140 70306935ff3224bc94f3fb0263b907ff 121 Gene3D G3DSA:4.10.910.10 73 120 4.4E-25 T 23-04-2016 IPR027437 30s ribosomal protein S13, C-terminal RR42_RS19140 70306935ff3224bc94f3fb0263b907ff 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 3.4E-53 T 23-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19140 70306935ff3224bc94f3fb0263b907ff 121 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.9E-31 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19140 70306935ff3224bc94f3fb0263b907ff 121 PIRSF PIRSF002134 1 121 1.2E-41 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS03585 3c5be7cff85659b0c9691b4e6c8ac9dc 1274 Pfam PF06744 Type VI secretion protein IcmF C-terminal 1020 1221 5.8E-50 T 23-04-2016 IPR010623 Type VI secretion system IcmF, C-terminal RR42_RS03585 3c5be7cff85659b0c9691b4e6c8ac9dc 1274 Pfam PF14331 ImcF-related N-terminal domain 260 528 2.9E-79 T 23-04-2016 IPR025743 ImcF-related, N-terminal domain RR42_RS03585 3c5be7cff85659b0c9691b4e6c8ac9dc 1274 SUPERFAMILY SSF52540 192 340 9.13E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03585 3c5be7cff85659b0c9691b4e6c8ac9dc 1274 Pfam PF06761 Intracellular multiplication and human macrophage-killing 579 897 2.3E-79 T 23-04-2016 IPR009612 ImcF-related RR42_RS03585 3c5be7cff85659b0c9691b4e6c8ac9dc 1274 Gene3D G3DSA:3.40.50.300 191 332 5.8E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03585 3c5be7cff85659b0c9691b4e6c8ac9dc 1274 PANTHER PTHR36153 47 1274 0.0 T 23-04-2016 RR42_RS03585 3c5be7cff85659b0c9691b4e6c8ac9dc 1274 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 71 1271 0.0 T 23-04-2016 IPR017731 Type VI secretion system, IcmF RR42_RS03585 3c5be7cff85659b0c9691b4e6c8ac9dc 1274 PANTHER PTHR36153:SF3 47 1274 0.0 T 23-04-2016 RR42_RS11485 58bfcaac8e1f15a439d5b27d2735deb0 580 Pfam PF13360 PQQ-like domain 68 222 1.7E-15 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat RR42_RS11485 58bfcaac8e1f15a439d5b27d2735deb0 580 SMART SM00564 84 115 4.0E-4 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RR42_RS11485 58bfcaac8e1f15a439d5b27d2735deb0 580 SMART SM00564 490 522 0.0019 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RR42_RS11485 58bfcaac8e1f15a439d5b27d2735deb0 580 SMART SM00564 132 164 1.3E-4 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RR42_RS11485 58bfcaac8e1f15a439d5b27d2735deb0 580 SMART SM00564 178 215 3.1 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RR42_RS11485 58bfcaac8e1f15a439d5b27d2735deb0 580 SMART SM00564 439 481 0.51 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RR42_RS11485 58bfcaac8e1f15a439d5b27d2735deb0 580 SMART SM00564 282 309 45.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RR42_RS11485 58bfcaac8e1f15a439d5b27d2735deb0 580 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 20 550 1.3E-234 T 23-04-2016 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 RR42_RS11485 58bfcaac8e1f15a439d5b27d2735deb0 580 Gene3D G3DSA:2.140.10.10 19 579 1.3E-151 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RR42_RS11485 58bfcaac8e1f15a439d5b27d2735deb0 580 PANTHER PTHR32303:SF2 237 354 1.3E-113 T 23-04-2016 RR42_RS11485 58bfcaac8e1f15a439d5b27d2735deb0 580 PANTHER PTHR32303:SF2 1 217 1.3E-113 T 23-04-2016 RR42_RS11485 58bfcaac8e1f15a439d5b27d2735deb0 580 PANTHER PTHR32303:SF2 395 580 1.3E-113 T 23-04-2016 RR42_RS11485 58bfcaac8e1f15a439d5b27d2735deb0 580 SUPERFAMILY SSF50998 30 573 7.2E-161 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RR42_RS11485 58bfcaac8e1f15a439d5b27d2735deb0 580 PANTHER PTHR32303 237 354 1.3E-113 T 23-04-2016 RR42_RS11485 58bfcaac8e1f15a439d5b27d2735deb0 580 PANTHER PTHR32303 1 217 1.3E-113 T 23-04-2016 RR42_RS11485 58bfcaac8e1f15a439d5b27d2735deb0 580 PANTHER PTHR32303 395 580 1.3E-113 T 23-04-2016 RR42_RS11485 58bfcaac8e1f15a439d5b27d2735deb0 580 Pfam PF01011 PQQ enzyme repeat 497 532 4.2E-9 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat RR42_RS18960 b2c6ff6f73a86a5e2b20c41c7fdc1cdc 175 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 147 4.3E-61 T 23-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 RR42_RS18960 b2c6ff6f73a86a5e2b20c41c7fdc1cdc 175 PANTHER PTHR33371 1 146 2.1E-42 T 23-04-2016 RR42_RS18960 b2c6ff6f73a86a5e2b20c41c7fdc1cdc 175 Pfam PF02470 MlaD protein 38 116 9.9E-23 T 23-04-2016 IPR003399 Mce/MlaD RR42_RS08395 b1187daf6ead7cbc23806a0969d2fcf7 304 SUPERFAMILY SSF52266 92 284 4.4E-12 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain RR42_RS08395 b1187daf6ead7cbc23806a0969d2fcf7 304 Gene3D G3DSA:3.40.50.1110 98 215 2.0E-6 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain RR42_RS02335 ab5908b67ad05afcadc9edffefb4d476 205 SUPERFAMILY SSF53448 16 200 4.16E-17 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RR42_RS02335 ab5908b67ad05afcadc9edffefb4d476 205 PANTHER PTHR19136:SF78 16 200 1.3E-20 T 23-04-2016 RR42_RS02335 ab5908b67ad05afcadc9edffefb4d476 205 Pfam PF12804 MobA-like NTP transferase domain 17 177 4.1E-30 T 23-04-2016 IPR025877 MobA-like NTP transferase RR42_RS02335 ab5908b67ad05afcadc9edffefb4d476 205 Gene3D G3DSA:3.90.550.10 15 200 3.3E-24 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RR42_RS02335 ab5908b67ad05afcadc9edffefb4d476 205 PANTHER PTHR19136 16 200 1.3E-20 T 23-04-2016 RR42_RS01880 f37020b2288f8780f38cf4182209f86b 534 Gene3D G3DSA:1.20.210.10 16 533 1.1E-218 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS01880 f37020b2288f8780f38cf4182209f86b 534 PANTHER PTHR10422 15 534 0.0 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS01880 f37020b2288f8780f38cf4182209f86b 534 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 30 533 1.0E-210 T 23-04-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS01880 f37020b2288f8780f38cf4182209f86b 534 PANTHER PTHR10422:SF27 15 534 0.0 T 23-04-2016 RR42_RS01880 f37020b2288f8780f38cf4182209f86b 534 SUPERFAMILY SSF81442 26 533 6.67E-190 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS01880 f37020b2288f8780f38cf4182209f86b 534 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 257 311 - T 23-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS01880 f37020b2288f8780f38cf4182209f86b 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 76 99 1.9E-118 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS01880 f37020b2288f8780f38cf4182209f86b 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 360 378 1.9E-118 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS01880 f37020b2288f8780f38cf4182209f86b 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 204 223 1.9E-118 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS01880 f37020b2288f8780f38cf4182209f86b 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 325 346 1.9E-118 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS01880 f37020b2288f8780f38cf4182209f86b 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 103 127 1.9E-118 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS01880 f37020b2288f8780f38cf4182209f86b 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 255 276 1.9E-118 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS01880 f37020b2288f8780f38cf4182209f86b 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 29 54 1.9E-118 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS01880 f37020b2288f8780f38cf4182209f86b 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 388 407 1.9E-118 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS01880 f37020b2288f8780f38cf4182209f86b 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 301 316 1.9E-118 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS01880 f37020b2288f8780f38cf4182209f86b 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 175 193 1.9E-118 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS01880 f37020b2288f8780f38cf4182209f86b 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 146 158 1.9E-118 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS01880 f37020b2288f8780f38cf4182209f86b 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 438 459 1.9E-118 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS01880 f37020b2288f8780f38cf4182209f86b 534 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 38 478 5.6E-151 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS10660 d18647d8a05c47b078c9aa9c929979ee 323 Pfam PF02780 Transketolase, C-terminal domain 194 314 2.0E-36 T 23-04-2016 IPR033248 Transketolase, C-terminal domain RR42_RS10660 d18647d8a05c47b078c9aa9c929979ee 323 SUPERFAMILY SSF52518 3 185 7.57E-64 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS10660 d18647d8a05c47b078c9aa9c929979ee 323 Pfam PF02779 Transketolase, pyrimidine binding domain 4 179 3.9E-43 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RR42_RS10660 d18647d8a05c47b078c9aa9c929979ee 323 SMART SM00861 4 179 1.3E-56 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RR42_RS10660 d18647d8a05c47b078c9aa9c929979ee 323 Gene3D G3DSA:3.40.50.920 194 322 5.6E-43 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RR42_RS10660 d18647d8a05c47b078c9aa9c929979ee 323 PANTHER PTHR11624 1 323 8.9E-133 T 23-04-2016 IPR033247 Transketolase family RR42_RS10660 d18647d8a05c47b078c9aa9c929979ee 323 SUPERFAMILY SSF52922 190 322 2.22E-39 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RR42_RS10660 d18647d8a05c47b078c9aa9c929979ee 323 Gene3D G3DSA:3.40.50.970 2 183 7.6E-75 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RR42_RS01540 2521db92f47fd3a7774f034b8d421b1a 296 PANTHER PTHR10992:SF778 3 292 7.1E-60 T 23-04-2016 RR42_RS01540 2521db92f47fd3a7774f034b8d421b1a 296 Pfam PF00561 alpha/beta hydrolase fold 26 151 3.1E-22 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS01540 2521db92f47fd3a7774f034b8d421b1a 296 PANTHER PTHR10992 3 292 7.1E-60 T 23-04-2016 RR42_RS01540 2521db92f47fd3a7774f034b8d421b1a 296 SUPERFAMILY SSF53474 2 290 3.08E-69 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS01540 2521db92f47fd3a7774f034b8d421b1a 296 Gene3D G3DSA:3.40.50.1820 3 290 9.7E-64 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS01540 2521db92f47fd3a7774f034b8d421b1a 296 PRINTS PR00412 Epoxide hydrolase signature 100 113 8.4E-5 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS01540 2521db92f47fd3a7774f034b8d421b1a 296 PRINTS PR00412 Epoxide hydrolase signature 114 127 8.4E-5 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS01540 2521db92f47fd3a7774f034b8d421b1a 296 PRINTS PR00412 Epoxide hydrolase signature 32 50 8.4E-5 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS01540 2521db92f47fd3a7774f034b8d421b1a 296 PRINTS PR00412 Epoxide hydrolase signature 267 289 8.4E-5 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS02255 ce6389137089bb660a564f7cd134bb0f 712 TIGRFAM TIGR03397 acid_phos_Burk: acid phosphatase, Burkholderia-type 205 708 3.4E-226 T 23-04-2016 IPR017768 Acid phosphatase, AcpA RR42_RS02255 ce6389137089bb660a564f7cd134bb0f 712 SUPERFAMILY SSF53649 471 661 2.59E-17 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RR42_RS02255 ce6389137089bb660a564f7cd134bb0f 712 PANTHER PTHR31956 305 402 9.0E-34 T 23-04-2016 RR42_RS02255 ce6389137089bb660a564f7cd134bb0f 712 PANTHER PTHR31956 205 227 9.0E-34 T 23-04-2016 RR42_RS02255 ce6389137089bb660a564f7cd134bb0f 712 PANTHER PTHR31956 256 289 9.0E-34 T 23-04-2016 RR42_RS02255 ce6389137089bb660a564f7cd134bb0f 712 PANTHER PTHR31956 488 680 9.0E-34 T 23-04-2016 RR42_RS02255 ce6389137089bb660a564f7cd134bb0f 712 Pfam PF04185 Phosphoesterase family 205 678 3.3E-95 T 23-04-2016 IPR007312 Phosphoesterase GO:0016788 RR42_RS02255 ce6389137089bb660a564f7cd134bb0f 712 Gene3D G3DSA:3.40.720.10 512 657 4.3E-6 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RR42_RS01640 66c41aa9cab9010d591fe28469872680 358 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 333 1.8E-34 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RR42_RS01640 66c41aa9cab9010d591fe28469872680 358 PANTHER PTHR30482:SF5 319 355 2.4E-87 T 23-04-2016 RR42_RS01640 66c41aa9cab9010d591fe28469872680 358 PANTHER PTHR30482:SF5 1 302 2.4E-87 T 23-04-2016 RR42_RS01640 66c41aa9cab9010d591fe28469872680 358 PANTHER PTHR30482 319 355 2.4E-87 T 23-04-2016 RR42_RS01640 66c41aa9cab9010d591fe28469872680 358 PANTHER PTHR30482 1 302 2.4E-87 T 23-04-2016 RR42_RS00310 8a636e913b452e69b44092ef31a1b935 245 SUPERFAMILY SSF46689 32 105 1.25E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS00310 8a636e913b452e69b44092ef31a1b935 245 Gene3D G3DSA:1.10.357.10 41 225 1.9E-25 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS00310 8a636e913b452e69b44092ef31a1b935 245 PANTHER PTHR30055 24 227 4.4E-18 T 23-04-2016 RR42_RS00310 8a636e913b452e69b44092ef31a1b935 245 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 66 89 2.2E-5 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS00310 8a636e913b452e69b44092ef31a1b935 245 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 58 2.2E-5 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS00310 8a636e913b452e69b44092ef31a1b935 245 Pfam PF00440 Bacterial regulatory proteins, tetR family 46 88 2.2E-12 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS09920 5326569e388a93f2f326dddd720432a8 235 Pfam PF00440 Bacterial regulatory proteins, tetR family 36 81 1.8E-14 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS09920 5326569e388a93f2f326dddd720432a8 235 PANTHER PTHR30055:SF73 20 198 8.9E-27 T 23-04-2016 RR42_RS09920 5326569e388a93f2f326dddd720432a8 235 PANTHER PTHR30055 20 198 8.9E-27 T 23-04-2016 RR42_RS09920 5326569e388a93f2f326dddd720432a8 235 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 56 79 1.0E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS09920 5326569e388a93f2f326dddd720432a8 235 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 48 1.0E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS09920 5326569e388a93f2f326dddd720432a8 235 SUPERFAMILY SSF48498 104 226 2.0E-23 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RR42_RS09920 5326569e388a93f2f326dddd720432a8 235 SUPERFAMILY SSF46689 27 102 5.08E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS09920 5326569e388a93f2f326dddd720432a8 235 Gene3D G3DSA:1.10.357.10 29 226 2.0E-34 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS18095 6e284ac524090451fde6cea81487499b 471 SUPERFAMILY SSF53623 110 325 3.66E-46 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS18095 6e284ac524090451fde6cea81487499b 471 Gene3D G3DSA:3.90.190.20 328 466 8.1E-43 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RR42_RS18095 6e284ac524090451fde6cea81487499b 471 PANTHER PTHR23135 19 464 1.3E-135 T 23-04-2016 RR42_RS18095 6e284ac524090451fde6cea81487499b 471 Gene3D G3DSA:3.40.1190.10 100 325 3.9E-61 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS18095 6e284ac524090451fde6cea81487499b 471 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 465 32.452 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS18095 6e284ac524090451fde6cea81487499b 471 SUPERFAMILY SSF63418 22 107 5.89E-26 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS18095 6e284ac524090451fde6cea81487499b 471 Pfam PF02875 Mur ligase family, glutamate ligase domain 328 400 1.2E-15 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RR42_RS18095 6e284ac524090451fde6cea81487499b 471 Pfam PF01225 Mur ligase family, catalytic domain 35 105 2.2E-12 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS18095 6e284ac524090451fde6cea81487499b 471 Gene3D G3DSA:3.40.1390.10 26 99 9.3E-26 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS18095 6e284ac524090451fde6cea81487499b 471 SUPERFAMILY SSF53244 328 464 1.01E-34 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RR42_RS18095 6e284ac524090451fde6cea81487499b 471 Pfam PF08245 Mur ligase middle domain 115 308 6.8E-40 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS18095 6e284ac524090451fde6cea81487499b 471 PANTHER PTHR23135:SF3 19 464 1.3E-135 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS18095 6e284ac524090451fde6cea81487499b 471 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 37 464 1.7E-126 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS05545 1db2856aa0912a0650a7ae8e1ad39814 354 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 18 349 24.519 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 RR42_RS05545 1db2856aa0912a0650a7ae8e1ad39814 354 PANTHER PTHR11432:SF3 4 354 1.6E-160 T 23-04-2016 RR42_RS05545 1db2856aa0912a0650a7ae8e1ad39814 354 Pfam PF00146 NADH dehydrogenase 25 342 2.7E-124 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 RR42_RS05545 1db2856aa0912a0650a7ae8e1ad39814 354 PANTHER PTHR11432 4 354 1.6E-160 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 RR42_RS05545 1db2856aa0912a0650a7ae8e1ad39814 354 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 230 243 - T 23-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 RR42_RS05030 d1951c8a2b5360e299542efbab05e0ec 555 Gene3D G3DSA:2.160.20.70 284 332 7.3E-4 T 23-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 RR42_RS05030 d1951c8a2b5360e299542efbab05e0ec 555 Pfam PF03961 Protein of unknown function (DUF342) 90 550 4.4E-107 T 23-04-2016 IPR005646 Protein of unknown function DUF342 RR42_RS05030 d1951c8a2b5360e299542efbab05e0ec 555 PANTHER PTHR38032 3 539 1.9E-80 T 23-04-2016 RR42_RS05030 d1951c8a2b5360e299542efbab05e0ec 555 SUPERFAMILY SSF63848 285 337 4.97E-5 T 23-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 RR42_RS20365 05c6f447657891ee69cfd9bb5bbd324d 310 Gene3D G3DSA:1.10.800.10 36 305 4.9E-99 T 23-04-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 RR42_RS20365 05c6f447657891ee69cfd9bb5bbd324d 310 SUPERFAMILY SSF56534 30 307 3.79E-107 T 23-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 RR42_RS20365 05c6f447657891ee69cfd9bb5bbd324d 310 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 48 263 2.1E-44 T 23-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 RR42_RS20365 05c6f447657891ee69cfd9bb5bbd324d 310 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 147 158 - T 23-04-2016 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 RR42_RS20365 05c6f447657891ee69cfd9bb5bbd324d 310 PANTHER PTHR11473 49 262 2.0E-73 T 23-04-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 RR42_RS20365 05c6f447657891ee69cfd9bb5bbd324d 310 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 104 126 2.8E-11 T 23-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 RR42_RS20365 05c6f447657891ee69cfd9bb5bbd324d 310 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 241 260 2.8E-11 T 23-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 RR42_RS20365 05c6f447657891ee69cfd9bb5bbd324d 310 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 209 227 2.8E-11 T 23-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 RR42_RS20365 05c6f447657891ee69cfd9bb5bbd324d 310 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 39 283 1.8E-119 T 23-04-2016 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158|UniPathway: UPA00139 RR42_RS15870 b186df3e5262e38dd320cae5bb280a36 145 Pfam PF03652 Holliday junction resolvase 18 142 3.4E-31 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RR42_RS15870 b186df3e5262e38dd320cae5bb280a36 145 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 20 141 8.9E-25 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RR42_RS15870 b186df3e5262e38dd320cae5bb280a36 145 SMART SM00732 17 117 5.6E-24 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RR42_RS15870 b186df3e5262e38dd320cae5bb280a36 145 PANTHER PTHR33317 17 141 9.5E-26 T 23-04-2016 RR42_RS15870 b186df3e5262e38dd320cae5bb280a36 145 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 17 144 20.428 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RR42_RS15870 b186df3e5262e38dd320cae5bb280a36 145 SUPERFAMILY SSF53098 17 143 7.74E-33 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS15870 b186df3e5262e38dd320cae5bb280a36 145 Gene3D G3DSA:3.30.420.140 17 143 8.3E-35 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RR42_RS04180 62be94e70947ae40fb2fd812c0cb6cf0 244 Gene3D G3DSA:3.40.50.150 16 192 1.1E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS04180 62be94e70947ae40fb2fd812c0cb6cf0 244 Pfam PF13489 Methyltransferase domain 26 172 2.1E-14 T 23-04-2016 RR42_RS04180 62be94e70947ae40fb2fd812c0cb6cf0 244 PANTHER PTHR10108 4 175 1.1E-15 T 23-04-2016 RR42_RS04180 62be94e70947ae40fb2fd812c0cb6cf0 244 PANTHER PTHR10108:SF739 4 175 1.1E-15 T 23-04-2016 RR42_RS04180 62be94e70947ae40fb2fd812c0cb6cf0 244 SUPERFAMILY SSF53335 17 190 2.15E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS07385 339be6adc6e0dd0df34d5f37fe4efc5f 192 Pfam PF09361 Phasin protein 6 104 2.0E-32 T 23-04-2016 IPR018968 Phasin RR42_RS07385 339be6adc6e0dd0df34d5f37fe4efc5f 192 TIGRFAM TIGR01841 phasin: phasin family protein 26 113 3.0E-29 T 23-04-2016 IPR010127 Phasin, subfamily 1 RR42_RS20560 bd0f9a375a35a99453aaf270aa8cc5ef 761 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 46 761 1.0E-124 T 23-04-2016 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 RR42_RS20560 bd0f9a375a35a99453aaf270aa8cc5ef 761 Gene3D G3DSA:2.170.130.10 37 174 6.0E-34 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RR42_RS20560 bd0f9a375a35a99453aaf270aa8cc5ef 761 Gene3D G3DSA:2.40.170.20 175 761 1.3E-104 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RR42_RS20560 bd0f9a375a35a99453aaf270aa8cc5ef 761 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 44 761 4.6E-122 T 23-04-2016 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 RR42_RS20560 bd0f9a375a35a99453aaf270aa8cc5ef 761 SUPERFAMILY SSF56935 33 761 1.44E-119 T 23-04-2016 RR42_RS20560 bd0f9a375a35a99453aaf270aa8cc5ef 761 PANTHER PTHR32552:SF18 31 761 6.5E-124 T 23-04-2016 RR42_RS20560 bd0f9a375a35a99453aaf270aa8cc5ef 761 PANTHER PTHR32552 31 761 6.5E-124 T 23-04-2016 RR42_RS20560 bd0f9a375a35a99453aaf270aa8cc5ef 761 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 171 4.2E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RR42_RS20560 bd0f9a375a35a99453aaf270aa8cc5ef 761 Pfam PF00593 TonB dependent receptor 495 759 8.4E-39 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RR42_RS05150 e1033eb2aafd1b116e4d238b0078e866 312 Gene3D G3DSA:3.90.850.10 86 305 4.2E-85 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RR42_RS05150 e1033eb2aafd1b116e4d238b0078e866 312 PANTHER PTHR11820 6 308 2.5E-99 T 23-04-2016 RR42_RS05150 e1033eb2aafd1b116e4d238b0078e866 312 PANTHER PTHR11820:SF6 6 308 2.5E-99 T 23-04-2016 RR42_RS05150 e1033eb2aafd1b116e4d238b0078e866 312 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 94 305 2.2E-74 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RR42_RS05150 e1033eb2aafd1b116e4d238b0078e866 312 SUPERFAMILY SSF56529 85 304 1.24E-75 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RR42_RS02340 2f385a24d8239cb5478bab86a4c96010 342 Gene3D G3DSA:3.40.50.20 164 231 5.1E-6 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RR42_RS02340 2f385a24d8239cb5478bab86a4c96010 342 SUPERFAMILY SSF51735 158 227 4.67E-5 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS02340 2f385a24d8239cb5478bab86a4c96010 342 Pfam PF02625 XdhC and CoxI family 15 83 3.5E-23 T 23-04-2016 IPR003777 XdhC- CoxI RR42_RS02340 2f385a24d8239cb5478bab86a4c96010 342 Pfam PF13478 XdhC Rossmann domain 165 306 4.0E-38 T 23-04-2016 IPR027051 XdhC Rossmann domain RR42_RS02340 2f385a24d8239cb5478bab86a4c96010 342 PANTHER PTHR30388:SF4 5 311 2.1E-86 T 23-04-2016 RR42_RS02340 2f385a24d8239cb5478bab86a4c96010 342 PANTHER PTHR30388 5 311 2.1E-86 T 23-04-2016 RR42_RS08365 ffc572c49de263f9f7e08bcb971ae972 259 SUPERFAMILY SSF53474 39 238 6.97E-15 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS08365 ffc572c49de263f9f7e08bcb971ae972 259 Gene3D G3DSA:3.40.50.1820 30 241 1.4E-15 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS00885 c21fc080dd6109149ed0fb6af3531e7b 398 Gene3D G3DSA:3.40.47.10 282 396 9.0E-54 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS00885 c21fc080dd6109149ed0fb6af3531e7b 398 Gene3D G3DSA:3.40.47.10 161 200 9.0E-54 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS00885 c21fc080dd6109149ed0fb6af3531e7b 398 PANTHER PTHR18919 1 398 2.2E-205 T 23-04-2016 RR42_RS00885 c21fc080dd6109149ed0fb6af3531e7b 398 ProSitePatterns PS00099 Thiolases active site. 379 392 - T 23-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RR42_RS00885 c21fc080dd6109149ed0fb6af3531e7b 398 Pfam PF00108 Thiolase, N-terminal domain 5 268 1.3E-82 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RR42_RS00885 c21fc080dd6109149ed0fb6af3531e7b 398 Pfam PF02803 Thiolase, C-terminal domain 276 395 2.5E-39 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RR42_RS00885 c21fc080dd6109149ed0fb6af3531e7b 398 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 395 6.0E-123 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RR42_RS00885 c21fc080dd6109149ed0fb6af3531e7b 398 SUPERFAMILY SSF53901 276 397 2.44E-39 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS00885 c21fc080dd6109149ed0fb6af3531e7b 398 Gene3D G3DSA:3.40.47.10 201 280 4.9E-69 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS00885 c21fc080dd6109149ed0fb6af3531e7b 398 Gene3D G3DSA:3.40.47.10 5 124 4.9E-69 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS00885 c21fc080dd6109149ed0fb6af3531e7b 398 SUPERFAMILY SSF53901 5 275 1.55E-78 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS00885 c21fc080dd6109149ed0fb6af3531e7b 398 PANTHER PTHR18919:SF110 1 398 2.2E-205 T 23-04-2016 RR42_RS00885 c21fc080dd6109149ed0fb6af3531e7b 398 PIRSF PIRSF000429 1 398 1.7E-112 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RR42_RS11385 8ce126a558a22e9d41f5d1ec9f99e4e0 158 Gene3D G3DSA:3.30.479.10 2 148 6.6E-35 T 23-04-2016 RR42_RS11385 8ce126a558a22e9d41f5d1ec9f99e4e0 158 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 7 120 2.2E-26 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein RR42_RS11385 8ce126a558a22e9d41f5d1ec9f99e4e0 158 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 7 149 8.7E-32 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein RR42_RS11385 8ce126a558a22e9d41f5d1ec9f99e4e0 158 PANTHER PTHR12589 4 156 1.7E-28 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein RR42_RS11385 8ce126a558a22e9d41f5d1ec9f99e4e0 158 SUPERFAMILY SSF55620 4 148 1.22E-36 T 23-04-2016 RR42_RS01860 7e6713392717607df29e9a9ae03c6268 243 SUPERFAMILY SSF53271 58 241 6.03E-30 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS01860 7e6713392717607df29e9a9ae03c6268 243 Pfam PF00156 Phosphoribosyl transferase domain 145 239 3.8E-9 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RR42_RS01860 7e6713392717607df29e9a9ae03c6268 243 Gene3D G3DSA:3.40.50.2020 61 241 3.3E-28 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS01860 7e6713392717607df29e9a9ae03c6268 243 PANTHER PTHR11907:SF9 10 242 2.5E-47 T 23-04-2016 RR42_RS01860 7e6713392717607df29e9a9ae03c6268 243 PANTHER PTHR11907 10 242 2.5E-47 T 23-04-2016 RR42_RS04140 9fcfa97d1d7f4a88120d8d0509d4b270 471 Gene3D G3DSA:3.40.50.300 252 378 8.6E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04140 9fcfa97d1d7f4a88120d8d0509d4b270 471 Gene3D G3DSA:3.40.50.300 161 194 8.6E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04140 9fcfa97d1d7f4a88120d8d0509d4b270 471 Pfam PF01078 Magnesium chelatase, subunit ChlI 176 207 7.4E-5 T 23-04-2016 IPR000523 Magnesium chelatase ChlI domain RR42_RS04140 9fcfa97d1d7f4a88120d8d0509d4b270 471 SUPERFAMILY SSF52540 161 442 9.69E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04140 9fcfa97d1d7f4a88120d8d0509d4b270 471 SMART SM00382 180 368 5.0E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS04140 9fcfa97d1d7f4a88120d8d0509d4b270 471 Gene3D G3DSA:3.40.50.300 195 229 3.5E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13210 a1c7568697889ed6c48bf2c0b72341c7 352 Gene3D G3DSA:2.40.160.10 22 352 1.1E-94 T 23-04-2016 IPR023614 Porin domain RR42_RS13210 a1c7568697889ed6c48bf2c0b72341c7 352 SUPERFAMILY SSF56935 22 352 8.55E-86 T 23-04-2016 RR42_RS13210 a1c7568697889ed6c48bf2c0b72341c7 352 PRINTS PR00184 Neisseria sp. porin signature 55 80 4.0E-8 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RR42_RS13210 a1c7568697889ed6c48bf2c0b72341c7 352 PRINTS PR00184 Neisseria sp. porin signature 188 205 4.0E-8 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RR42_RS13210 a1c7568697889ed6c48bf2c0b72341c7 352 PRINTS PR00184 Neisseria sp. porin signature 296 320 4.0E-8 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RR42_RS13210 a1c7568697889ed6c48bf2c0b72341c7 352 Pfam PF13609 Gram-negative porin 7 324 6.7E-52 T 23-04-2016 RR42_RS14435 2cf55ba259ab6316fa9611e12660f830 95 Pfam PF03937 Flavinator of succinate dehydrogenase 18 82 1.3E-19 T 23-04-2016 IPR005631 Flavinator of succinate dehydrogenase RR42_RS14435 2cf55ba259ab6316fa9611e12660f830 95 SUPERFAMILY SSF109910 11 89 2.09E-19 T 23-04-2016 IPR005631 Flavinator of succinate dehydrogenase RR42_RS14435 2cf55ba259ab6316fa9611e12660f830 95 Gene3D G3DSA:1.10.150.250 12 92 8.4E-23 T 23-04-2016 IPR005631 Flavinator of succinate dehydrogenase RR42_RS06585 cef34dc6d30b72c6a47ea09cf0886d7d 740 Pfam PF04607 Region found in RelA / SpoT proteins 247 356 5.6E-38 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 RR42_RS06585 cef34dc6d30b72c6a47ea09cf0886d7d 740 SUPERFAMILY SSF109604 10 201 6.91E-44 T 23-04-2016 RR42_RS06585 cef34dc6d30b72c6a47ea09cf0886d7d 740 Pfam PF13291 ACT domain 664 739 9.2E-17 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RR42_RS06585 cef34dc6d30b72c6a47ea09cf0886d7d 740 Gene3D G3DSA:3.30.70.260 666 737 6.5E-16 T 23-04-2016 RR42_RS06585 cef34dc6d30b72c6a47ea09cf0886d7d 740 SMART SM00954 247 357 1.8E-65 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 RR42_RS06585 cef34dc6d30b72c6a47ea09cf0886d7d 740 Gene3D G3DSA:3.10.20.30 411 472 8.4E-21 T 23-04-2016 IPR012675 Beta-grasp domain RR42_RS06585 cef34dc6d30b72c6a47ea09cf0886d7d 740 Gene3D G3DSA:3.30.460.10 189 336 1.1E-50 T 23-04-2016 RR42_RS06585 cef34dc6d30b72c6a47ea09cf0886d7d 740 Pfam PF02824 TGS domain 411 469 7.3E-20 T 23-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 RR42_RS06585 cef34dc6d30b72c6a47ea09cf0886d7d 740 SUPERFAMILY SSF55021 664 739 3.24E-14 T 23-04-2016 RR42_RS06585 cef34dc6d30b72c6a47ea09cf0886d7d 740 Pfam PF13328 HD domain 23 188 8.3E-48 T 23-04-2016 IPR003607 HD/PDEase domain RR42_RS06585 cef34dc6d30b72c6a47ea09cf0886d7d 740 PANTHER PTHR21262 126 740 7.3E-268 T 23-04-2016 RR42_RS06585 cef34dc6d30b72c6a47ea09cf0886d7d 740 PANTHER PTHR21262 42 110 7.3E-268 T 23-04-2016 RR42_RS06585 cef34dc6d30b72c6a47ea09cf0886d7d 740 PANTHER PTHR21262:SF5 126 740 7.3E-268 T 23-04-2016 RR42_RS06585 cef34dc6d30b72c6a47ea09cf0886d7d 740 PANTHER PTHR21262:SF5 42 110 7.3E-268 T 23-04-2016 RR42_RS06585 cef34dc6d30b72c6a47ea09cf0886d7d 740 SUPERFAMILY SSF81271 404 469 4.8E-19 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RR42_RS06585 cef34dc6d30b72c6a47ea09cf0886d7d 740 SUPERFAMILY SSF81301 204 384 1.08E-62 T 23-04-2016 RR42_RS06585 cef34dc6d30b72c6a47ea09cf0886d7d 740 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 51 739 6.7E-176 T 23-04-2016 IPR004811 RelA/SpoT family GO:0015969 RR42_RS11300 bbed4e289cd5f59099e0a78218e3a9eb 272 SUPERFAMILY SSF51735 3 236 6.52E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS11300 bbed4e289cd5f59099e0a78218e3a9eb 272 PANTHER PTHR10366 3 214 5.7E-41 T 23-04-2016 RR42_RS11300 bbed4e289cd5f59099e0a78218e3a9eb 272 PANTHER PTHR10366:SF476 3 214 5.7E-41 T 23-04-2016 RR42_RS11300 bbed4e289cd5f59099e0a78218e3a9eb 272 Gene3D G3DSA:3.40.50.720 3 171 2.3E-28 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS11300 bbed4e289cd5f59099e0a78218e3a9eb 272 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 163 1.6E-18 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RR42_RS01960 b0f1ef08344ae764875d485f48c4f882 217 PANTHER PTHR26402 27 191 3.8E-39 T 23-04-2016 RR42_RS01960 b0f1ef08344ae764875d485f48c4f882 217 PIRSF PIRSF036382 18 217 9.5E-56 T 23-04-2016 IPR008327 Signal transduction response regulator, antiterminator RR42_RS01960 b0f1ef08344ae764875d485f48c4f882 217 Gene3D G3DSA:1.10.10.10 163 216 7.7E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS01960 b0f1ef08344ae764875d485f48c4f882 217 Gene3D G3DSA:3.40.50.2300 18 151 8.2E-11 T 23-04-2016 RR42_RS01960 b0f1ef08344ae764875d485f48c4f882 217 SUPERFAMILY SSF52172 24 213 1.66E-40 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS01960 b0f1ef08344ae764875d485f48c4f882 217 PANTHER PTHR26402:SF567 27 191 3.8E-39 T 23-04-2016 RR42_RS01960 b0f1ef08344ae764875d485f48c4f882 217 SMART SM01012 158 213 3.4E-21 T 23-04-2016 IPR005561 ANTAR domain GO:0003723 RR42_RS01960 b0f1ef08344ae764875d485f48c4f882 217 Pfam PF03861 ANTAR domain 163 213 1.1E-17 T 23-04-2016 IPR005561 ANTAR domain GO:0003723 RR42_RS17605 4c1c84945ec2b6e4031e7cb6d29d1de5 122 SUPERFAMILY SSF53933 24 120 1.49E-35 T 23-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 RR42_RS17605 4c1c84945ec2b6e4031e7cb6d29d1de5 122 Pfam PF00545 ribonuclease 37 119 1.5E-29 T 23-04-2016 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 RR42_RS17605 4c1c84945ec2b6e4031e7cb6d29d1de5 122 Gene3D G3DSA:3.10.450.30 29 121 1.4E-39 T 23-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 RR42_RS09485 d515eecf0b4b13ede3095397cfeb9c5e 216 SUPERFAMILY SSF161098 13 198 2.75E-43 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS09485 d515eecf0b4b13ede3095397cfeb9c5e 216 Gene3D G3DSA:1.10.3720.10 13 213 4.9E-45 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS09485 d515eecf0b4b13ede3095397cfeb9c5e 216 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 107 2.4E-29 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RR42_RS09485 d515eecf0b4b13ede3095397cfeb9c5e 216 PANTHER PTHR30614 4 216 5.0E-86 T 23-04-2016 RR42_RS09485 d515eecf0b4b13ede3095397cfeb9c5e 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 212 5.0E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS09485 d515eecf0b4b13ede3095397cfeb9c5e 216 PANTHER PTHR30614:SF8 4 216 5.0E-86 T 23-04-2016 RR42_RS20290 519c81cdec356aa15830dd8242b12077 566 Pfam PF05199 GMC oxidoreductase 387 525 5.7E-39 T 23-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 RR42_RS20290 519c81cdec356aa15830dd8242b12077 566 PANTHER PTHR11552 2 551 4.2E-222 T 23-04-2016 RR42_RS20290 519c81cdec356aa15830dd8242b12077 566 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 81 104 - T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 RR42_RS20290 519c81cdec356aa15830dd8242b12077 566 Gene3D G3DSA:3.50.50.60 466 534 1.5E-126 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS20290 519c81cdec356aa15830dd8242b12077 566 Gene3D G3DSA:3.50.50.60 2 126 1.5E-126 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS20290 519c81cdec356aa15830dd8242b12077 566 Gene3D G3DSA:3.50.50.60 187 313 1.5E-126 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS20290 519c81cdec356aa15830dd8242b12077 566 SUPERFAMILY SSF51905 472 534 6.31E-95 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS20290 519c81cdec356aa15830dd8242b12077 566 SUPERFAMILY SSF51905 3 288 6.31E-95 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS20290 519c81cdec356aa15830dd8242b12077 566 SUPERFAMILY SSF54373 290 473 9.03E-58 T 23-04-2016 RR42_RS20290 519c81cdec356aa15830dd8242b12077 566 Pfam PF00732 GMC oxidoreductase 4 295 2.2E-82 T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 RR42_RS20290 519c81cdec356aa15830dd8242b12077 566 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 254 268 - T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 RR42_RS20290 519c81cdec356aa15830dd8242b12077 566 PANTHER PTHR11552:SF51 2 551 4.2E-222 T 23-04-2016 RR42_RS20290 519c81cdec356aa15830dd8242b12077 566 PIRSF PIRSF000137 1 541 2.0E-150 T 23-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 RR42_RS19970 eb88516f02a5f86bb594403ee168c0a8 293 SUPERFAMILY SSF161098 92 276 2.35E-26 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS19970 eb88516f02a5f86bb594403ee168c0a8 293 PANTHER PTHR30151 21 289 8.2E-78 T 23-04-2016 RR42_RS19970 eb88516f02a5f86bb594403ee168c0a8 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 285 2.8E-24 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS19970 eb88516f02a5f86bb594403ee168c0a8 293 PANTHER PTHR30151:SF18 21 289 8.2E-78 T 23-04-2016 RR42_RS19970 eb88516f02a5f86bb594403ee168c0a8 293 Gene3D G3DSA:1.10.3720.10 89 285 2.9E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS19950 54f0b2779a85e622753b4212c4bb9653 404 Pfam PF07690 Major Facilitator Superfamily 15 239 1.6E-15 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS19950 54f0b2779a85e622753b4212c4bb9653 404 Pfam PF07690 Major Facilitator Superfamily 264 398 3.1E-13 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS19950 54f0b2779a85e622753b4212c4bb9653 404 Gene3D G3DSA:1.20.1250.20 28 198 1.4E-10 T 23-04-2016 RR42_RS19950 54f0b2779a85e622753b4212c4bb9653 404 PANTHER PTHR23534 11 394 2.5E-59 T 23-04-2016 RR42_RS19950 54f0b2779a85e622753b4212c4bb9653 404 Gene3D G3DSA:1.20.1250.20 216 397 1.5E-18 T 23-04-2016 RR42_RS19950 54f0b2779a85e622753b4212c4bb9653 404 SUPERFAMILY SSF103473 10 396 1.57E-35 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS13375 2ed45795d7fc5cc3b77171f922836ceb 375 Gene3D G3DSA:1.10.3720.10 143 348 7.1E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS13375 2ed45795d7fc5cc3b77171f922836ceb 375 SUPERFAMILY SSF161098 147 334 3.79E-24 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS13375 2ed45795d7fc5cc3b77171f922836ceb 375 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 170 351 3.3E-29 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS13375 2ed45795d7fc5cc3b77171f922836ceb 375 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 53 1.0E-7 T 23-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RR42_RS13375 2ed45795d7fc5cc3b77171f922836ceb 375 PANTHER PTHR30325 13 356 1.7E-154 T 23-04-2016 RR42_RS18885 a55bc9b457548d33e3c00848226cfa3a 256 Gene3D G3DSA:3.20.20.70 4 256 2.8E-108 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS18885 a55bc9b457548d33e3c00848226cfa3a 256 Pfam PF00977 Histidine biosynthesis protein 5 238 2.7E-90 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 RR42_RS18885 a55bc9b457548d33e3c00848226cfa3a 256 PANTHER PTHR21235 1 256 1.2E-123 T 23-04-2016 RR42_RS18885 a55bc9b457548d33e3c00848226cfa3a 256 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 255 49.053 T 23-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 RR42_RS18885 a55bc9b457548d33e3c00848226cfa3a 256 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 255 1.6E-112 T 23-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 RR42_RS18885 a55bc9b457548d33e3c00848226cfa3a 256 SUPERFAMILY SSF51366 1 255 1.88E-86 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RR42_RS18885 a55bc9b457548d33e3c00848226cfa3a 256 PANTHER PTHR21235:SF2 1 256 1.2E-123 T 23-04-2016 RR42_RS18150 3b26dcadde9bb191997de0c307fd0bcd 560 Pfam PF13193 AMP-binding enzyme C-terminal domain 473 547 7.7E-19 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RR42_RS18150 3b26dcadde9bb191997de0c307fd0bcd 560 Pfam PF00501 AMP-binding enzyme 30 464 4.2E-109 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS18150 3b26dcadde9bb191997de0c307fd0bcd 560 Gene3D G3DSA:2.30.38.10 384 455 1.9E-29 T 23-04-2016 RR42_RS18150 3b26dcadde9bb191997de0c307fd0bcd 560 SUPERFAMILY SSF56801 19 555 5.89E-154 T 23-04-2016 RR42_RS18150 3b26dcadde9bb191997de0c307fd0bcd 560 PANTHER PTHR24096 22 159 2.6E-177 T 23-04-2016 RR42_RS18150 3b26dcadde9bb191997de0c307fd0bcd 560 PANTHER PTHR24096 175 555 2.6E-177 T 23-04-2016 RR42_RS18150 3b26dcadde9bb191997de0c307fd0bcd 560 Gene3D G3DSA:3.40.50.980 215 383 1.1E-42 T 23-04-2016 RR42_RS18150 3b26dcadde9bb191997de0c307fd0bcd 560 ProSitePatterns PS00455 Putative AMP-binding domain signature. 210 221 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS18150 3b26dcadde9bb191997de0c307fd0bcd 560 Gene3D G3DSA:3.30.300.30 459 555 1.1E-28 T 23-04-2016 RR42_RS18150 3b26dcadde9bb191997de0c307fd0bcd 560 Gene3D G3DSA:3.40.50.980 184 214 3.4E-41 T 23-04-2016 RR42_RS18150 3b26dcadde9bb191997de0c307fd0bcd 560 Gene3D G3DSA:3.40.50.980 24 151 3.4E-41 T 23-04-2016 RR42_RS19010 d7b9fcd4b38cd3a0df58d057fc1871d3 191 SUPERFAMILY SSF52540 1 156 2.35E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS19010 d7b9fcd4b38cd3a0df58d057fc1871d3 191 ProSitePatterns PS01128 Shikimate kinase signature. 48 73 - T 23-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 RR42_RS19010 d7b9fcd4b38cd3a0df58d057fc1871d3 191 PRINTS PR01100 Shikimate kinase family signature 65 74 3.0E-11 T 23-04-2016 RR42_RS19010 d7b9fcd4b38cd3a0df58d057fc1871d3 191 PRINTS PR01100 Shikimate kinase family signature 47 55 3.0E-11 T 23-04-2016 RR42_RS19010 d7b9fcd4b38cd3a0df58d057fc1871d3 191 PRINTS PR01100 Shikimate kinase family signature 86 103 3.0E-11 T 23-04-2016 RR42_RS19010 d7b9fcd4b38cd3a0df58d057fc1871d3 191 PRINTS PR01100 Shikimate kinase family signature 19 32 3.0E-11 T 23-04-2016 RR42_RS19010 d7b9fcd4b38cd3a0df58d057fc1871d3 191 Pfam PF01202 Shikimate kinase 1 157 1.1E-52 T 23-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 RR42_RS19010 d7b9fcd4b38cd3a0df58d057fc1871d3 191 Hamap MF_00109 Shikimate kinase [aroK]. 1 158 25.296 T 23-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 RR42_RS19010 d7b9fcd4b38cd3a0df58d057fc1871d3 191 Gene3D G3DSA:3.40.50.300 1 159 2.4E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS19010 d7b9fcd4b38cd3a0df58d057fc1871d3 191 PANTHER PTHR21087 1 165 3.4E-56 T 23-04-2016 RR42_RS19010 d7b9fcd4b38cd3a0df58d057fc1871d3 191 PANTHER PTHR21087:SF0 1 165 3.4E-56 T 23-04-2016 RR42_RS07880 ac1cb0d654a8d48d74693d727be37ef2 449 Pfam PF00672 HAMP domain 164 232 2.9E-13 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS07880 ac1cb0d654a8d48d74693d727be37ef2 449 Pfam PF16524 Periplasmic domain of Sensor histidine kinase RisS 48 154 1.7E-38 T 23-04-2016 IPR032408 Sensor histidine kinase RisS, periplasmic domain RR42_RS07880 ac1cb0d654a8d48d74693d727be37ef2 449 SUPERFAMILY SSF47384 221 292 6.47E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS07880 ac1cb0d654a8d48d74693d727be37ef2 449 Gene3D G3DSA:1.10.287.130 226 281 3.2E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS07880 ac1cb0d654a8d48d74693d727be37ef2 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 434 1.1E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS07880 ac1cb0d654a8d48d74693d727be37ef2 449 Gene3D G3DSA:3.30.565.10 282 435 7.8E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS07880 ac1cb0d654a8d48d74693d727be37ef2 449 SMART SM00388 236 295 3.6E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS07880 ac1cb0d654a8d48d74693d727be37ef2 449 SUPERFAMILY SSF55874 286 437 1.05E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS07880 ac1cb0d654a8d48d74693d727be37ef2 449 SMART SM00387 333 449 2.5E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS07880 ac1cb0d654a8d48d74693d727be37ef2 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 2.0E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS07880 ac1cb0d654a8d48d74693d727be37ef2 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 2.0E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS07880 ac1cb0d654a8d48d74693d727be37ef2 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 291 1.4E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS07880 ac1cb0d654a8d48d74693d727be37ef2 449 SMART SM00304 183 235 3.5E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RR42_RS07880 ac1cb0d654a8d48d74693d727be37ef2 449 PANTHER PTHR24423 177 434 2.5E-47 T 23-04-2016 RR42_RS05870 7be6654e8da6b3387b79f4132ebf2c20 351 Pfam PF13847 Methyltransferase domain 171 282 2.0E-17 T 23-04-2016 IPR025714 Methyltransferase domain RR42_RS05870 7be6654e8da6b3387b79f4132ebf2c20 351 PANTHER PTHR10108 134 281 1.2E-18 T 23-04-2016 RR42_RS05870 7be6654e8da6b3387b79f4132ebf2c20 351 Gene3D G3DSA:3.40.50.150 166 291 1.1E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS05870 7be6654e8da6b3387b79f4132ebf2c20 351 SUPERFAMILY SSF46785 18 89 7.07E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS05870 7be6654e8da6b3387b79f4132ebf2c20 351 SUPERFAMILY SSF53335 136 286 2.3E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS05870 7be6654e8da6b3387b79f4132ebf2c20 351 Gene3D G3DSA:1.10.10.10 15 88 7.6E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS04435 5700960eeeb50f77c09e567434217711 249 PANTHER PTHR10108 17 246 2.4E-113 T 23-04-2016 RR42_RS04435 5700960eeeb50f77c09e567434217711 249 Gene3D G3DSA:3.40.50.150 36 231 4.3E-42 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS04435 5700960eeeb50f77c09e567434217711 249 PANTHER PTHR10108:SF910 17 246 2.4E-113 T 23-04-2016 RR42_RS04435 5700960eeeb50f77c09e567434217711 249 Pfam PF13489 Methyltransferase domain 64 218 2.2E-24 T 23-04-2016 RR42_RS04435 5700960eeeb50f77c09e567434217711 249 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 25 242 2.0E-83 T 23-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 RR42_RS04435 5700960eeeb50f77c09e567434217711 249 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 23 248 38.244 T 23-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 RR42_RS04435 5700960eeeb50f77c09e567434217711 249 SUPERFAMILY SSF53335 27 245 6.0E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS11345 2a3f5cfe5ccf427bb89a60fab0acd940 378 Gene3D G3DSA:1.20.140.10 220 378 1.9E-59 T 23-04-2016 RR42_RS11345 2a3f5cfe5ccf427bb89a60fab0acd940 378 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 218 6.7E-26 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RR42_RS11345 2a3f5cfe5ccf427bb89a60fab0acd940 378 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 119 3.7E-35 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS11345 2a3f5cfe5ccf427bb89a60fab0acd940 378 Gene3D G3DSA:2.40.110.10 122 219 3.0E-41 T 23-04-2016 RR42_RS11345 2a3f5cfe5ccf427bb89a60fab0acd940 378 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RR42_RS11345 2a3f5cfe5ccf427bb89a60fab0acd940 378 PANTHER PTHR10909:SF190 1 378 1.3E-207 T 23-04-2016 RR42_RS11345 2a3f5cfe5ccf427bb89a60fab0acd940 378 PANTHER PTHR10909 1 378 1.3E-207 T 23-04-2016 RR42_RS11345 2a3f5cfe5ccf427bb89a60fab0acd940 378 SUPERFAMILY SSF47203 228 378 6.12E-49 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS11345 2a3f5cfe5ccf427bb89a60fab0acd940 378 Gene3D G3DSA:1.10.540.10 6 121 1.9E-36 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS11345 2a3f5cfe5ccf427bb89a60fab0acd940 378 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 378 4.0E-43 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS11345 2a3f5cfe5ccf427bb89a60fab0acd940 378 SUPERFAMILY SSF56645 5 241 2.88E-88 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RR42_RS17240 d97a29878c04fb40fc02bdd631b356d2 172 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 87 98 - T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RR42_RS17240 d97a29878c04fb40fc02bdd631b356d2 172 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 131 6.8E-37 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RR42_RS17240 d97a29878c04fb40fc02bdd631b356d2 172 SUPERFAMILY SSF55083 1 144 1.18E-47 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RR42_RS17240 d97a29878c04fb40fc02bdd631b356d2 172 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 131 2.6E-34 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RR42_RS17240 d97a29878c04fb40fc02bdd631b356d2 172 PANTHER PTHR20941 1 140 9.1E-52 T 23-04-2016 RR42_RS17240 d97a29878c04fb40fc02bdd631b356d2 172 Gene3D G3DSA:3.30.70.560 4 152 7.4E-50 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RR42_RS00915 93a01939cfbd3dfb4b251de00cfb787c 224 PANTHER PTHR11260 12 208 7.1E-27 T 23-04-2016 RR42_RS00915 93a01939cfbd3dfb4b251de00cfb787c 224 Gene3D G3DSA:1.20.1050.10 95 211 2.4E-24 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS00915 93a01939cfbd3dfb4b251de00cfb787c 224 SUPERFAMILY SSF52833 9 90 3.66E-13 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS00915 93a01939cfbd3dfb4b251de00cfb787c 224 Pfam PF13417 Glutathione S-transferase, N-terminal domain 12 89 7.4E-7 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RR42_RS00915 93a01939cfbd3dfb4b251de00cfb787c 224 Pfam PF13410 Glutathione S-transferase, C-terminal domain 135 200 2.0E-9 T 23-04-2016 RR42_RS00915 93a01939cfbd3dfb4b251de00cfb787c 224 SUPERFAMILY SSF47616 87 214 4.87E-28 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS00915 93a01939cfbd3dfb4b251de00cfb787c 224 Gene3D G3DSA:3.40.30.10 6 90 1.5E-15 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS12925 4d443166000f19ac6d450fa805177ba9 365 SUPERFAMILY SSF52540 47 194 5.76E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12925 4d443166000f19ac6d450fa805177ba9 365 PANTHER PTHR12169:SF11 1 358 2.0E-150 T 23-04-2016 RR42_RS12925 4d443166000f19ac6d450fa805177ba9 365 Gene3D G3DSA:3.40.50.300 15 167 2.0E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12925 4d443166000f19ac6d450fa805177ba9 365 PANTHER PTHR12169 1 358 2.0E-150 T 23-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 RR42_RS12925 4d443166000f19ac6d450fa805177ba9 365 Pfam PF03969 AFG1-like ATPase 3 354 4.4E-126 T 23-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 RR42_RS20385 1f7bc66480ea21692465db37308afe3b 188 Pfam PF00856 SET domain 47 148 1.0E-16 T 23-04-2016 IPR001214 SET domain GO:0005515 RR42_RS20385 1f7bc66480ea21692465db37308afe3b 188 PANTHER PTHR22884 31 167 6.2E-32 T 23-04-2016 RR42_RS20385 1f7bc66480ea21692465db37308afe3b 188 SMART SM00317 36 154 4.6E-28 T 23-04-2016 IPR001214 SET domain GO:0005515 RR42_RS20385 1f7bc66480ea21692465db37308afe3b 188 PANTHER PTHR22884:SF336 31 167 6.2E-32 T 23-04-2016 RR42_RS20385 1f7bc66480ea21692465db37308afe3b 188 SMART SM00508 161 177 0.0029 T 23-04-2016 IPR003616 Post-SET domain KEGG: 00310+2.1.1.43 RR42_RS20385 1f7bc66480ea21692465db37308afe3b 188 Gene3D G3DSA:2.170.270.10 34 176 2.7E-43 T 23-04-2016 RR42_RS20385 1f7bc66480ea21692465db37308afe3b 188 SUPERFAMILY SSF82199 36 174 1.11E-43 T 23-04-2016 RR42_RS01970 aab49bdbe2d167dbc5a4d4397f6bb49a 214 Pfam PF00043 Glutathione S-transferase, C-terminal domain 155 200 5.2E-6 T 23-04-2016 IPR004046 Glutathione S-transferase, C-terminal RR42_RS01970 aab49bdbe2d167dbc5a4d4397f6bb49a 214 SUPERFAMILY SSF52833 1 85 2.08E-23 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS01970 aab49bdbe2d167dbc5a4d4397f6bb49a 214 PANTHER PTHR11260 1 214 2.4E-102 T 23-04-2016 RR42_RS01970 aab49bdbe2d167dbc5a4d4397f6bb49a 214 Gene3D G3DSA:3.40.30.10 1 85 7.7E-27 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS01970 aab49bdbe2d167dbc5a4d4397f6bb49a 214 SUPERFAMILY SSF47616 82 213 2.23E-33 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS01970 aab49bdbe2d167dbc5a4d4397f6bb49a 214 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 213 6.6E-87 T 23-04-2016 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 RR42_RS01970 aab49bdbe2d167dbc5a4d4397f6bb49a 214 Gene3D G3DSA:1.20.1050.10 86 214 2.2E-53 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS01970 aab49bdbe2d167dbc5a4d4397f6bb49a 214 PANTHER PTHR11260:SF289 1 214 2.4E-102 T 23-04-2016 RR42_RS01970 aab49bdbe2d167dbc5a4d4397f6bb49a 214 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 82 9.3E-17 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RR42_RS02850 77953a9ff8367bf7fa316c1432160629 331 Gene3D G3DSA:3.40.50.300 119 321 2.6E-88 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02850 77953a9ff8367bf7fa316c1432160629 331 Pfam PF02562 PhoH-like protein 120 322 7.7E-93 T 23-04-2016 IPR003714 PhoH-like protein GO:0005524 RR42_RS02850 77953a9ff8367bf7fa316c1432160629 331 PANTHER PTHR30473:SF1 1 330 2.2E-158 T 23-04-2016 RR42_RS02850 77953a9ff8367bf7fa316c1432160629 331 PANTHER PTHR30473 1 330 2.2E-158 T 23-04-2016 RR42_RS02850 77953a9ff8367bf7fa316c1432160629 331 SUPERFAMILY SSF52540 118 297 8.5E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS10030 73e0eb363602f85e2fdce160d12bbedd 129 Pfam PF12893 Putative lumazine-binding 11 123 3.3E-32 T 23-04-2016 RR42_RS10030 73e0eb363602f85e2fdce160d12bbedd 129 SUPERFAMILY SSF54427 8 125 3.07E-34 T 23-04-2016 IPR032710 NTF2-like domain RR42_RS10030 73e0eb363602f85e2fdce160d12bbedd 129 Gene3D G3DSA:3.10.450.50 8 125 1.2E-36 T 23-04-2016 IPR032710 NTF2-like domain RR42_RS19755 95b1ee3f2005f686598af80618920500 215 SUPERFAMILY SSF53098 9 192 2.0E-23 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS19755 95b1ee3f2005f686598af80618920500 215 Gene3D G3DSA:3.30.420.10 9 194 4.8E-8 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS10560 03c6eb9bf659f552654ccbcbddca0646 281 SUPERFAMILY SSF53474 10 280 8.38E-57 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS10560 03c6eb9bf659f552654ccbcbddca0646 281 Pfam PF00561 alpha/beta hydrolase fold 41 266 7.8E-22 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS10560 03c6eb9bf659f552654ccbcbddca0646 281 PANTHER PTHR10992 162 281 2.8E-44 T 23-04-2016 RR42_RS10560 03c6eb9bf659f552654ccbcbddca0646 281 PANTHER PTHR10992 10 143 2.8E-44 T 23-04-2016 RR42_RS10560 03c6eb9bf659f552654ccbcbddca0646 281 Gene3D G3DSA:3.40.50.1820 10 280 6.2E-52 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS11510 ed53645814bf15d1629ca3c84d843a57 393 SUPERFAMILY SSF53822 96 356 1.55E-19 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RR42_RS11510 ed53645814bf15d1629ca3c84d843a57 393 TIGRFAM TIGR03863 PQQ_ABC_bind: ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system 46 390 3.5E-139 T 23-04-2016 IPR022478 ABC transporter, substrate-binding protein, PQQ-dependent alcohol dehydrogenase system RR42_RS11510 ed53645814bf15d1629ca3c84d843a57 393 Gene3D G3DSA:3.40.50.2300 99 210 8.4E-5 T 23-04-2016 RR42_RS05760 9d5fe9675455327848dfc28302f4be5e 507 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 9 186 9.4E-58 T 23-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RR42_RS05760 9d5fe9675455327848dfc28302f4be5e 507 SUPERFAMILY SSF48179 416 496 9.35E-17 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RR42_RS05760 9d5fe9675455327848dfc28302f4be5e 507 Gene3D G3DSA:3.40.50.720 4 190 6.4E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS05760 9d5fe9675455327848dfc28302f4be5e 507 SUPERFAMILY SSF48179 188 296 3.49E-28 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RR42_RS05760 9d5fe9675455327848dfc28302f4be5e 507 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 416 494 2.4E-15 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RR42_RS05760 9d5fe9675455327848dfc28302f4be5e 507 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 189 286 8.0E-25 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RR42_RS05760 9d5fe9675455327848dfc28302f4be5e 507 PANTHER PTHR23309:SF12 6 304 9.3E-196 T 23-04-2016 RR42_RS05760 9d5fe9675455327848dfc28302f4be5e 507 PANTHER PTHR23309:SF12 393 502 9.3E-196 T 23-04-2016 RR42_RS05760 9d5fe9675455327848dfc28302f4be5e 507 SUPERFAMILY SSF51735 5 188 3.57E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS05760 9d5fe9675455327848dfc28302f4be5e 507 Gene3D G3DSA:1.10.1040.10 191 286 8.7E-27 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RR42_RS05760 9d5fe9675455327848dfc28302f4be5e 507 Gene3D G3DSA:1.10.1040.10 416 492 1.5E-16 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RR42_RS05760 9d5fe9675455327848dfc28302f4be5e 507 PANTHER PTHR23309 6 304 9.3E-196 T 23-04-2016 RR42_RS05760 9d5fe9675455327848dfc28302f4be5e 507 PANTHER PTHR23309 393 502 9.3E-196 T 23-04-2016 RR42_RS13930 6cd4dba6843fdef9060494ff0b1527d6 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 135 9.0E-32 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RR42_RS13930 6cd4dba6843fdef9060494ff0b1527d6 137 PANTHER PTHR30558:SF3 10 136 1.8E-35 T 23-04-2016 RR42_RS13930 6cd4dba6843fdef9060494ff0b1527d6 137 PANTHER PTHR30558 10 136 1.8E-35 T 23-04-2016 RR42_RS28680 146cd35dabaf469224ebfecf8a120fb3 115 SMART SM01040 19 112 2.9E-26 T 23-04-2016 IPR003497 BRO N-terminal domain RR42_RS28680 146cd35dabaf469224ebfecf8a120fb3 115 Pfam PF02498 BRO family, N-terminal domain 20 109 5.3E-14 T 23-04-2016 IPR003497 BRO N-terminal domain RR42_RS05960 7abe992334ab2cec573bd02f02e2d1db 314 SUPERFAMILY SSF103481 208 305 5.62E-16 T 23-04-2016 RR42_RS05960 7abe992334ab2cec573bd02f02e2d1db 314 Pfam PF00892 EamA-like transporter family 164 301 3.6E-23 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS05960 7abe992334ab2cec573bd02f02e2d1db 314 Pfam PF00892 EamA-like transporter family 23 156 2.2E-16 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS05960 7abe992334ab2cec573bd02f02e2d1db 314 SUPERFAMILY SSF103481 59 159 3.01E-15 T 23-04-2016 RR42_RS05960 7abe992334ab2cec573bd02f02e2d1db 314 PANTHER PTHR22911 2 302 5.2E-51 T 23-04-2016 RR42_RS24095 2a61b20bf6e073e67e8d280b7b817eba 109 Pfam PF02321 Outer membrane efflux protein 3 64 2.4E-6 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RR42_RS24095 2a61b20bf6e073e67e8d280b7b817eba 109 Gene3D G3DSA:1.20.1600.10 2 109 2.5E-25 T 23-04-2016 RR42_RS24095 2a61b20bf6e073e67e8d280b7b817eba 109 SUPERFAMILY SSF56954 2 109 2.62E-21 T 23-04-2016 RR42_RS24095 2a61b20bf6e073e67e8d280b7b817eba 109 PANTHER PTHR30203:SF7 2 109 3.0E-25 T 23-04-2016 RR42_RS24095 2a61b20bf6e073e67e8d280b7b817eba 109 PANTHER PTHR30203 2 109 3.0E-25 T 23-04-2016 RR42_RS10605 07c75b05615cee320767628a0d7680a6 615 PANTHER PTHR33362 49 615 1.4E-126 T 23-04-2016 RR42_RS10605 07c75b05615cee320767628a0d7680a6 615 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 205 610 1.3E-93 T 23-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 RR42_RS10605 07c75b05615cee320767628a0d7680a6 615 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 32 156 1.2E-27 T 23-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RR42_RS10605 07c75b05615cee320767628a0d7680a6 615 PANTHER PTHR33362:SF8 49 615 1.4E-126 T 23-04-2016 RR42_RS10605 07c75b05615cee320767628a0d7680a6 615 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 197 604 7.5E-96 T 23-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RR42_RS14715 695e4220901fa8a3912af6006322e450 131 Pfam PF12779 YXWGXW repeat (2 copies) 50 76 9.7E-8 T 23-04-2016 IPR024447 YXWGXW repeat RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 8 525 4.7E-205 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 PANTHER PTHR10724 1 519 8.2E-244 T 23-04-2016 RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 Pfam PF00575 S1 RNA binding domain 455 525 5.7E-13 T 23-04-2016 IPR003029 S1 domain GO:0003676 RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 Pfam PF00575 S1 RNA binding domain 366 439 4.1E-19 T 23-04-2016 IPR003029 S1 domain GO:0003676 RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 Pfam PF00575 S1 RNA binding domain 24 90 1.8E-6 T 23-04-2016 IPR003029 S1 domain GO:0003676 RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 Pfam PF00575 S1 RNA binding domain 287 352 2.2E-20 T 23-04-2016 IPR003029 S1 domain GO:0003676 RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 Pfam PF00575 S1 RNA binding domain 108 176 9.7E-13 T 23-04-2016 IPR003029 S1 domain GO:0003676 RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 Pfam PF00575 S1 RNA binding domain 194 265 3.2E-22 T 23-04-2016 IPR003029 S1 domain GO:0003676 RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 Gene3D G3DSA:2.40.50.140 26 106 2.2E-9 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 Gene3D G3DSA:2.40.50.140 287 361 2.4E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 PRINTS PR00681 Ribosomal protein S1 signature 217 238 2.2E-81 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 PRINTS PR00681 Ribosomal protein S1 signature 335 353 2.2E-81 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 PRINTS PR00681 Ribosomal protein S1 signature 26 44 2.2E-81 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 PRINTS PR00681 Ribosomal protein S1 signature 113 129 2.2E-81 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 PRINTS PR00681 Ribosomal protein S1 signature 160 180 2.2E-81 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 PRINTS PR00681 Ribosomal protein S1 signature 89 108 2.2E-81 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 PRINTS PR00681 Ribosomal protein S1 signature 131 148 2.2E-81 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 PRINTS PR00681 Ribosomal protein S1 signature 44 58 2.2E-81 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 PRINTS PR00681 Ribosomal protein S1 signature 295 314 2.2E-81 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 SUPERFAMILY SSF50249 108 190 9.61E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 SUPERFAMILY SSF50249 434 537 1.12E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 PANTHER PTHR10724:SF6 1 519 8.2E-244 T 23-04-2016 RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 Gene3D G3DSA:2.40.50.140 362 442 5.8E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 SUPERFAMILY SSF50249 260 359 4.08E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 PIRSF PIRSF002111 1 539 4.5E-214 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 SUPERFAMILY SSF50249 9 118 3.28E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 Gene3D G3DSA:2.40.50.140 188 267 2.6E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 Gene3D G3DSA:2.40.50.140 447 526 3.6E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 Gene3D G3DSA:2.40.50.140 107 177 9.8E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 SMART SM00316 454 525 1.4E-17 T 23-04-2016 IPR022967 RNA-binding domain, S1 RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 SMART SM00316 108 176 2.1E-10 T 23-04-2016 IPR022967 RNA-binding domain, S1 RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 SMART SM00316 24 92 0.0013 T 23-04-2016 IPR022967 RNA-binding domain, S1 RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 SMART SM00316 367 439 7.6E-20 T 23-04-2016 IPR022967 RNA-binding domain, S1 RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 SMART SM00316 195 265 6.7E-29 T 23-04-2016 IPR022967 RNA-binding domain, S1 RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 SMART SM00316 280 352 2.4E-23 T 23-04-2016 IPR022967 RNA-binding domain, S1 RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 SUPERFAMILY SSF50249 194 279 5.0E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS04490 435553ff47be71c660b9b12ebdf8d547 564 SUPERFAMILY SSF50249 347 445 6.34E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS09835 316b58dd51f3d54eb094dee5e74c443d 226 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 192 221 5.0E-9 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RR42_RS09835 316b58dd51f3d54eb094dee5e74c443d 226 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 163 190 5.0E-9 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RR42_RS09835 316b58dd51f3d54eb094dee5e74c443d 226 SUPERFAMILY SSF58104 105 221 4.1E-14 T 23-04-2016 RR42_RS09835 316b58dd51f3d54eb094dee5e74c443d 226 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 16 74 1.1E-8 T 23-04-2016 IPR029095 NarX-like, N-terminal RR42_RS09835 316b58dd51f3d54eb094dee5e74c443d 226 Gene3D G3DSA:1.10.287.950 115 196 1.0E-13 T 23-04-2016 RR42_RS09835 316b58dd51f3d54eb094dee5e74c443d 226 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 136 196 1.7E-10 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RR42_RS01345 233e6447a1d364a70e78329e451c1272 703 Gene3D G3DSA:3.40.50.261 134 293 1.2E-23 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RR42_RS01345 233e6447a1d364a70e78329e451c1272 703 SUPERFAMILY SSF51735 8 141 3.5E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS01345 233e6447a1d364a70e78329e451c1272 703 SUPERFAMILY SSF52210 302 453 2.22E-26 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RR42_RS01345 233e6447a1d364a70e78329e451c1272 703 PANTHER PTHR33303:SF3 3 437 1.7E-155 T 23-04-2016 RR42_RS01345 233e6447a1d364a70e78329e451c1272 703 PANTHER PTHR33303:SF3 454 698 1.7E-155 T 23-04-2016 RR42_RS01345 233e6447a1d364a70e78329e451c1272 703 Pfam PF13549 ATP-grasp domain 480 696 1.7E-49 T 23-04-2016 RR42_RS01345 233e6447a1d364a70e78329e451c1272 703 Gene3D G3DSA:3.30.1490.20 493 526 3.6E-5 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RR42_RS01345 233e6447a1d364a70e78329e451c1272 703 Gene3D G3DSA:3.40.50.720 6 133 3.4E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS01345 233e6447a1d364a70e78329e451c1272 703 SUPERFAMILY SSF56059 481 697 9.72E-31 T 23-04-2016 RR42_RS01345 233e6447a1d364a70e78329e451c1272 703 SUPERFAMILY SSF52210 145 293 2.22E-34 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RR42_RS01345 233e6447a1d364a70e78329e451c1272 703 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 159 296 2.7E-42 T 23-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain RR42_RS01345 233e6447a1d364a70e78329e451c1272 703 Pfam PF13380 CoA binding domain 12 137 3.9E-20 T 23-04-2016 IPR003781 CoA-binding GO:0048037 RR42_RS01345 233e6447a1d364a70e78329e451c1272 703 SMART SM00881 8 103 6.0E-29 T 23-04-2016 IPR003781 CoA-binding GO:0048037 RR42_RS01345 233e6447a1d364a70e78329e451c1272 703 PANTHER PTHR33303 3 437 1.7E-155 T 23-04-2016 RR42_RS01345 233e6447a1d364a70e78329e451c1272 703 PANTHER PTHR33303 454 698 1.7E-155 T 23-04-2016 RR42_RS37930 d94c1368134c87ce4165e9b518888e64 150 Pfam PF03961 Protein of unknown function (DUF342) 1 149 1.1E-36 T 23-04-2016 IPR005646 Protein of unknown function DUF342 RR42_RS37930 d94c1368134c87ce4165e9b518888e64 150 PANTHER PTHR38032 1 149 3.3E-23 T 23-04-2016 RR42_RS37930 d94c1368134c87ce4165e9b518888e64 150 Gene3D G3DSA:2.160.20.70 19 68 6.4E-5 T 23-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 RR42_RS37930 d94c1368134c87ce4165e9b518888e64 150 SUPERFAMILY SSF63848 21 73 6.02E-6 T 23-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 RR42_RS20485 4233d0bc58291eb5e7286f4f26de0c10 134 Pfam PF00085 Thioredoxin 24 83 1.2E-5 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 RR42_RS20485 4233d0bc58291eb5e7286f4f26de0c10 134 Gene3D G3DSA:3.40.30.10 25 82 2.3E-8 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS20485 4233d0bc58291eb5e7286f4f26de0c10 134 SUPERFAMILY SSF52833 23 93 1.23E-11 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS17365 30c98a2e76ac8c1a0372986bb24b8627 285 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 283 27.822 T 23-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 RR42_RS17365 30c98a2e76ac8c1a0372986bb24b8627 285 Pfam PF01040 UbiA prenyltransferase family 23 268 1.9E-59 T 23-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 RR42_RS17365 30c98a2e76ac8c1a0372986bb24b8627 285 PANTHER PTHR11048 3 280 3.5E-77 T 23-04-2016 RR42_RS17365 30c98a2e76ac8c1a0372986bb24b8627 285 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 6 282 1.4E-96 T 23-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 RR42_RS17365 30c98a2e76ac8c1a0372986bb24b8627 285 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 62 84 - T 23-04-2016 IPR030470 UbiA prenyltransferase conserved site RR42_RS37750 3319300725ca54ab66153d9131482882 93 Pfam PF01979 Amidohydrolase family 15 52 1.5E-6 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RR42_RS37750 3319300725ca54ab66153d9131482882 93 Gene3D G3DSA:3.20.20.140 6 56 1.5E-7 T 23-04-2016 RR42_RS10735 d614752db73534a3b0a77785a2c51322 497 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 249 264 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RR42_RS10735 d614752db73534a3b0a77785a2c51322 497 SUPERFAMILY SSF52540 162 406 5.55E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS10735 d614752db73534a3b0a77785a2c51322 497 Pfam PF02954 Bacterial regulatory protein, Fis family 453 492 4.0E-12 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS10735 d614752db73534a3b0a77785a2c51322 497 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 376 385 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RR42_RS10735 d614752db73534a3b0a77785a2c51322 497 SUPERFAMILY SSF46689 376 495 3.58E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS10735 d614752db73534a3b0a77785a2c51322 497 PANTHER PTHR32071 36 495 8.5E-173 T 23-04-2016 RR42_RS10735 d614752db73534a3b0a77785a2c51322 497 PANTHER PTHR32071:SF22 36 495 8.5E-173 T 23-04-2016 RR42_RS10735 d614752db73534a3b0a77785a2c51322 497 Pfam PF08448 PAS fold 28 120 5.3E-7 T 23-04-2016 IPR013656 PAS fold-4 RR42_RS10735 d614752db73534a3b0a77785a2c51322 497 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 186 199 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RR42_RS10735 d614752db73534a3b0a77785a2c51322 497 Gene3D G3DSA:3.30.450.20 24 117 7.6E-8 T 23-04-2016 RR42_RS10735 d614752db73534a3b0a77785a2c51322 497 Pfam PF00158 Sigma-54 interaction domain 163 330 8.4E-61 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RR42_RS10735 d614752db73534a3b0a77785a2c51322 497 SMART SM00382 182 327 3.6E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS10735 d614752db73534a3b0a77785a2c51322 497 Gene3D G3DSA:1.10.10.60 438 496 1.8E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS10735 d614752db73534a3b0a77785a2c51322 497 Gene3D G3DSA:1.10.8.60 336 407 4.2E-20 T 23-04-2016 RR42_RS10735 d614752db73534a3b0a77785a2c51322 497 SUPERFAMILY SSF55785 23 119 1.52E-10 T 23-04-2016 IPR000014 PAS domain RR42_RS10735 d614752db73534a3b0a77785a2c51322 497 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 459 476 6.1E-9 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS10735 d614752db73534a3b0a77785a2c51322 497 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 476 496 6.1E-9 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RR42_RS10735 d614752db73534a3b0a77785a2c51322 497 Gene3D G3DSA:3.40.50.300 159 335 2.1E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS19770 ba14d7aba3619bca5b33d3c0065c004e 301 Gene3D G3DSA:3.40.190.10 196 264 2.3E-22 T 23-04-2016 RR42_RS19770 ba14d7aba3619bca5b33d3c0065c004e 301 SUPERFAMILY SSF53850 91 297 9.96E-40 T 23-04-2016 RR42_RS19770 ba14d7aba3619bca5b33d3c0065c004e 301 Pfam PF03466 LysR substrate binding domain 90 292 9.4E-45 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS19770 ba14d7aba3619bca5b33d3c0065c004e 301 Gene3D G3DSA:3.40.190.10 86 195 4.2E-27 T 23-04-2016 RR42_RS19770 ba14d7aba3619bca5b33d3c0065c004e 301 Gene3D G3DSA:1.10.10.10 6 85 3.9E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19770 ba14d7aba3619bca5b33d3c0065c004e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.4E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS19770 ba14d7aba3619bca5b33d3c0065c004e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.4E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS19770 ba14d7aba3619bca5b33d3c0065c004e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.4E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS19770 ba14d7aba3619bca5b33d3c0065c004e 301 SUPERFAMILY SSF46785 4 114 1.87E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19770 ba14d7aba3619bca5b33d3c0065c004e 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 4.2E-20 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS19770 ba14d7aba3619bca5b33d3c0065c004e 301 PANTHER PTHR30126 4 294 4.7E-67 T 23-04-2016 RR42_RS19530 9d68067344a2e077d11443243918249b 405 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 404 2.5E-170 T 23-04-2016 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 RR42_RS19530 9d68067344a2e077d11443243918249b 405 PANTHER PTHR30012:SF5 2 405 8.1E-171 T 23-04-2016 RR42_RS19530 9d68067344a2e077d11443243918249b 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 5.5E-30 T 23-04-2016 IPR003004 GspF/PilC family RR42_RS19530 9d68067344a2e077d11443243918249b 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 5.5E-30 T 23-04-2016 IPR003004 GspF/PilC family RR42_RS19530 9d68067344a2e077d11443243918249b 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 5.5E-30 T 23-04-2016 IPR003004 GspF/PilC family RR42_RS19530 9d68067344a2e077d11443243918249b 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 5.5E-30 T 23-04-2016 IPR003004 GspF/PilC family RR42_RS19530 9d68067344a2e077d11443243918249b 405 PANTHER PTHR30012 2 405 8.1E-171 T 23-04-2016 RR42_RS19530 9d68067344a2e077d11443243918249b 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 1.5E-31 T 23-04-2016 IPR018076 Type II secretion system F domain RR42_RS19530 9d68067344a2e077d11443243918249b 405 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 4.5E-26 T 23-04-2016 IPR018076 Type II secretion system F domain RR42_RS08570 25444e0f574367e8c2c97c46541b27df 523 SUPERFAMILY SSF88874 467 522 3.92E-24 T 23-04-2016 RR42_RS08570 25444e0f574367e8c2c97c46541b27df 523 SUPERFAMILY SSF88874 290 425 3.92E-24 T 23-04-2016 RR42_RS08570 25444e0f574367e8c2c97c46541b27df 523 Pfam PF07484 Phage Tail Collar Domain 300 333 3.0E-4 T 23-04-2016 IPR011083 Phage tail collar domain RR42_RS08570 25444e0f574367e8c2c97c46541b27df 523 Gene3D G3DSA:3.90.1340.10 295 377 5.1E-8 T 23-04-2016 IPR011083 Phage tail collar domain RR42_RS17340 78b098a5a71438c0be1630a322dbb804 163 PIRSF PIRSF000303 1 163 5.2E-66 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RR42_RS17340 78b098a5a71438c0be1630a322dbb804 163 Pfam PF00255 Glutathione peroxidase 4 110 1.5E-40 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RR42_RS17340 78b098a5a71438c0be1630a322dbb804 163 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 23-04-2016 IPR029759 Glutathione peroxidase active site RR42_RS17340 78b098a5a71438c0be1630a322dbb804 163 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 23-04-2016 IPR029760 Glutathione peroxidase conserved site RR42_RS17340 78b098a5a71438c0be1630a322dbb804 163 Gene3D G3DSA:3.40.30.10 3 160 8.9E-70 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS17340 78b098a5a71438c0be1630a322dbb804 163 PRINTS PR01011 Glutathione peroxidase family signature 22 39 5.9E-21 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RR42_RS17340 78b098a5a71438c0be1630a322dbb804 163 PRINTS PR01011 Glutathione peroxidase family signature 123 132 5.9E-21 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RR42_RS17340 78b098a5a71438c0be1630a322dbb804 163 PRINTS PR01011 Glutathione peroxidase family signature 57 73 5.9E-21 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RR42_RS17340 78b098a5a71438c0be1630a322dbb804 163 PANTHER PTHR11592 1 161 2.1E-88 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RR42_RS17340 78b098a5a71438c0be1630a322dbb804 163 SUPERFAMILY SSF52833 3 159 4.23E-59 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS07595 54a6133dd82ce989a901cab891880536 267 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 23 264 7.6E-70 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RR42_RS07595 54a6133dd82ce989a901cab891880536 267 PANTHER PTHR30616:SF3 7 267 4.1E-109 T 23-04-2016 RR42_RS07595 54a6133dd82ce989a901cab891880536 267 Gene3D G3DSA:3.60.140.10 4 265 1.1E-90 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RR42_RS07595 54a6133dd82ce989a901cab891880536 267 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 44 265 2.9E-50 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RR42_RS07595 54a6133dd82ce989a901cab891880536 267 SUPERFAMILY SSF64438 5 265 1.5E-75 T 23-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic RR42_RS07595 54a6133dd82ce989a901cab891880536 267 PANTHER PTHR30616 7 267 4.1E-109 T 23-04-2016 RR42_RS09380 7fcb2a21a5399cc4b2d7d7bdca8a2c0c 326 Gene3D G3DSA:3.90.180.10 3 148 1.0E-40 T 23-04-2016 IPR011032 GroES-like RR42_RS09380 7fcb2a21a5399cc4b2d7d7bdca8a2c0c 326 PANTHER PTHR11695 16 326 1.3E-120 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RR42_RS09380 7fcb2a21a5399cc4b2d7d7bdca8a2c0c 326 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 142 163 - T 23-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 RR42_RS09380 7fcb2a21a5399cc4b2d7d7bdca8a2c0c 326 SMART SM00829 11 324 3.8E-34 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RR42_RS09380 7fcb2a21a5399cc4b2d7d7bdca8a2c0c 326 Pfam PF00107 Zinc-binding dehydrogenase 153 258 8.9E-31 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RR42_RS09380 7fcb2a21a5399cc4b2d7d7bdca8a2c0c 326 SUPERFAMILY SSF50129 3 146 4.72E-34 T 23-04-2016 IPR011032 GroES-like RR42_RS09380 7fcb2a21a5399cc4b2d7d7bdca8a2c0c 326 Gene3D G3DSA:3.40.50.720 149 258 5.5E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS09380 7fcb2a21a5399cc4b2d7d7bdca8a2c0c 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 2.6E-8 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RR42_RS09380 7fcb2a21a5399cc4b2d7d7bdca8a2c0c 326 PANTHER PTHR11695:SF605 16 326 1.3E-120 T 23-04-2016 RR42_RS09380 7fcb2a21a5399cc4b2d7d7bdca8a2c0c 326 SUPERFAMILY SSF51735 114 265 1.56E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS00890 f671e37ac50e303f101190031e78341d 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 3.3E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS00890 f671e37ac50e303f101190031e78341d 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 3.3E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS00890 f671e37ac50e303f101190031e78341d 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 3.3E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS00890 f671e37ac50e303f101190031e78341d 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 3.3E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS00890 f671e37ac50e303f101190031e78341d 226 Pfam PF00106 short chain dehydrogenase 3 189 1.8E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS00890 f671e37ac50e303f101190031e78341d 226 PANTHER PTHR24322 6 130 4.0E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS00890 f671e37ac50e303f101190031e78341d 226 PANTHER PTHR24322 150 180 4.0E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS00890 f671e37ac50e303f101190031e78341d 226 Gene3D G3DSA:3.40.50.720 3 226 1.4E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS00890 f671e37ac50e303f101190031e78341d 226 SUPERFAMILY SSF51735 2 226 1.93E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS00890 f671e37ac50e303f101190031e78341d 226 PANTHER PTHR24322:SF469 6 130 4.0E-28 T 23-04-2016 RR42_RS00890 f671e37ac50e303f101190031e78341d 226 PANTHER PTHR24322:SF469 150 180 4.0E-28 T 23-04-2016 RR42_RS02250 9b878557c205a031fd91d1046899aac8 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 77 1.4E-19 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS02250 9b878557c205a031fd91d1046899aac8 250 Gene3D G3DSA:1.10.10.10 14 74 2.1E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS02250 9b878557c205a031fd91d1046899aac8 250 Gene3D G3DSA:3.40.1410.10 75 242 4.8E-40 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RR42_RS02250 9b878557c205a031fd91d1046899aac8 250 SUPERFAMILY SSF46785 14 89 4.18E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS02250 9b878557c205a031fd91d1046899aac8 250 SMART SM00345 18 77 1.8E-19 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS02250 9b878557c205a031fd91d1046899aac8 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 5.0E-5 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS02250 9b878557c205a031fd91d1046899aac8 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 5.0E-5 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS02250 9b878557c205a031fd91d1046899aac8 250 Pfam PF07702 UTRA domain 101 238 3.8E-30 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RR42_RS02250 9b878557c205a031fd91d1046899aac8 250 SMART SM00866 98 239 6.1E-30 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RR42_RS02250 9b878557c205a031fd91d1046899aac8 250 PANTHER PTHR11751 15 78 1.8E-20 T 23-04-2016 RR42_RS02250 9b878557c205a031fd91d1046899aac8 250 SUPERFAMILY SSF64288 66 242 6.91E-37 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RR42_RS12395 5ff15ae268d0058a83867dacc906eeb4 442 Gene3D G3DSA:1.10.10.10 377 437 1.9E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS12395 5ff15ae268d0058a83867dacc906eeb4 442 SMART SM00421 378 435 2.3E-8 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS12395 5ff15ae268d0058a83867dacc906eeb4 442 SUPERFAMILY SSF46894 370 438 3.74E-13 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS12395 5ff15ae268d0058a83867dacc906eeb4 442 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 395 411 6.8E-5 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS12395 5ff15ae268d0058a83867dacc906eeb4 442 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 411 423 6.8E-5 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS12395 5ff15ae268d0058a83867dacc906eeb4 442 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 381 395 6.8E-5 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS12395 5ff15ae268d0058a83867dacc906eeb4 442 SMART SM00091 230 296 0.002 T 23-04-2016 IPR000014 PAS domain RR42_RS12395 5ff15ae268d0058a83867dacc906eeb4 442 SUPERFAMILY SSF55785 230 292 8.2E-5 T 23-04-2016 IPR000014 PAS domain RR42_RS12395 5ff15ae268d0058a83867dacc906eeb4 442 Gene3D G3DSA:3.30.450.20 231 296 1.9E-6 T 23-04-2016 RR42_RS12395 5ff15ae268d0058a83867dacc906eeb4 442 Pfam PF00989 PAS fold 234 294 5.0E-5 T 23-04-2016 IPR013767 PAS fold GO:0006355 RR42_RS12395 5ff15ae268d0058a83867dacc906eeb4 442 Pfam PF00196 Bacterial regulatory proteins, luxR family 381 434 2.1E-8 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS20520 b403c9390031b8a074fce71169007bd2 468 Gene3D G3DSA:3.30.565.10 328 451 8.1E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS20520 b403c9390031b8a074fce71169007bd2 468 Gene3D G3DSA:3.30.450.20 40 184 3.5E-48 T 23-04-2016 RR42_RS20520 b403c9390031b8a074fce71169007bd2 468 PIRSF PIRSF037314 1 464 2.3E-192 T 23-04-2016 IPR017171 Signal transduction histidine kinase, MctS RR42_RS20520 b403c9390031b8a074fce71169007bd2 468 PANTHER PTHR24421 101 466 2.4E-54 T 23-04-2016 RR42_RS20520 b403c9390031b8a074fce71169007bd2 468 Pfam PF07730 Histidine kinase 249 319 1.1E-15 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RR42_RS20520 b403c9390031b8a074fce71169007bd2 468 SMART SM01049 42 132 2.6E-30 T 23-04-2016 IPR033480 Single Cache domain 2 RR42_RS20520 b403c9390031b8a074fce71169007bd2 468 Pfam PF17200 Single Cache domain 2 47 189 1.8E-39 T 23-04-2016 IPR033480 Single Cache domain 2 RR42_RS20520 b403c9390031b8a074fce71169007bd2 468 SMART SM00387 357 452 3.3E-6 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS20520 b403c9390031b8a074fce71169007bd2 468 SUPERFAMILY SSF55874 320 441 3.01E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS20520 b403c9390031b8a074fce71169007bd2 468 PANTHER PTHR24421:SF1 101 466 2.4E-54 T 23-04-2016 RR42_RS13235 3c87f788f95846fe2c74a46c4e56dd0b 263 Gene3D G3DSA:1.10.3720.10 57 252 3.4E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS13235 3c87f788f95846fe2c74a46c4e56dd0b 263 SUPERFAMILY SSF161098 59 241 1.11E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS13235 3c87f788f95846fe2c74a46c4e56dd0b 263 PANTHER PTHR30151 37 263 2.9E-94 T 23-04-2016 RR42_RS13235 3c87f788f95846fe2c74a46c4e56dd0b 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 250 1.7E-22 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS13235 3c87f788f95846fe2c74a46c4e56dd0b 263 PANTHER PTHR30151:SF18 37 263 2.9E-94 T 23-04-2016 RR42_RS18540 b10f420a829530468e2c524ce7e3f6ab 501 SUPERFAMILY SSF56801 6 496 2.09E-121 T 23-04-2016 RR42_RS18540 b10f420a829530468e2c524ce7e3f6ab 501 Gene3D G3DSA:3.40.50.980 153 316 8.2E-35 T 23-04-2016 RR42_RS18540 b10f420a829530468e2c524ce7e3f6ab 501 Pfam PF13193 AMP-binding enzyme C-terminal domain 408 483 2.4E-14 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RR42_RS18540 b10f420a829530468e2c524ce7e3f6ab 501 Gene3D G3DSA:3.40.50.980 8 152 3.2E-25 T 23-04-2016 RR42_RS18540 b10f420a829530468e2c524ce7e3f6ab 501 Gene3D G3DSA:2.30.38.10 317 390 1.9E-15 T 23-04-2016 RR42_RS18540 b10f420a829530468e2c524ce7e3f6ab 501 PANTHER PTHR24096 9 501 8.1E-170 T 23-04-2016 RR42_RS18540 b10f420a829530468e2c524ce7e3f6ab 501 ProSitePatterns PS00455 Putative AMP-binding domain signature. 145 156 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS18540 b10f420a829530468e2c524ce7e3f6ab 501 Pfam PF00501 AMP-binding enzyme 7 399 4.9E-68 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS18540 b10f420a829530468e2c524ce7e3f6ab 501 Gene3D G3DSA:3.30.300.30 395 494 7.2E-28 T 23-04-2016 RR42_RS18540 b10f420a829530468e2c524ce7e3f6ab 501 PANTHER PTHR24096:SF106 9 501 8.1E-170 T 23-04-2016 RR42_RS07540 7f8e2dfdfc0df940c7dffa54a5054617 323 PANTHER PTHR30482 15 317 4.1E-77 T 23-04-2016 RR42_RS07540 7f8e2dfdfc0df940c7dffa54a5054617 323 Pfam PF02653 Branched-chain amino acid transport system / permease component 32 300 2.6E-43 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RR42_RS07540 7f8e2dfdfc0df940c7dffa54a5054617 323 PANTHER PTHR30482:SF2 15 317 4.1E-77 T 23-04-2016 RR42_RS02785 457fc1f29612ebc034fd1c5bb961a7fc 273 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 269 54.553 T 23-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 RR42_RS02785 457fc1f29612ebc034fd1c5bb961a7fc 273 Gene3D G3DSA:3.40.50.150 6 194 7.3E-70 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS02785 457fc1f29612ebc034fd1c5bb961a7fc 273 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 267 2.6E-78 T 23-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 RR42_RS02785 457fc1f29612ebc034fd1c5bb961a7fc 273 SUPERFAMILY SSF53335 5 269 1.29E-71 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS02785 457fc1f29612ebc034fd1c5bb961a7fc 273 SMART SM00650 25 195 2.3E-77 T 23-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 RR42_RS02785 457fc1f29612ebc034fd1c5bb961a7fc 273 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 23-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 RR42_RS02785 457fc1f29612ebc034fd1c5bb961a7fc 273 Pfam PF00398 Ribosomal RNA adenine dimethylase 10 262 2.3E-56 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RR42_RS02785 457fc1f29612ebc034fd1c5bb961a7fc 273 Gene3D G3DSA:1.10.8.100 205 269 6.0E-19 T 23-04-2016 IPR023165 rRNA adenine dimethylase-like RR42_RS02785 457fc1f29612ebc034fd1c5bb961a7fc 273 PANTHER PTHR11727 7 269 7.4E-82 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RR42_RS20040 f67aa2f1e6383be7368b34aa5ec95faf 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 163 237 1.6E-22 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS20040 f67aa2f1e6383be7368b34aa5ec95faf 243 Pfam PF00072 Response regulator receiver domain 12 119 5.6E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS20040 f67aa2f1e6383be7368b34aa5ec95faf 243 SUPERFAMILY SSF52172 5 127 3.84E-39 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS20040 f67aa2f1e6383be7368b34aa5ec95faf 243 Gene3D G3DSA:3.40.50.2300 7 127 8.6E-38 T 23-04-2016 RR42_RS20040 f67aa2f1e6383be7368b34aa5ec95faf 243 PANTHER PTHR26402:SF292 9 238 5.2E-83 T 23-04-2016 RR42_RS20040 f67aa2f1e6383be7368b34aa5ec95faf 243 SUPERFAMILY SSF46894 135 237 1.02E-25 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS20040 f67aa2f1e6383be7368b34aa5ec95faf 243 PANTHER PTHR26402 9 238 5.2E-83 T 23-04-2016 RR42_RS20040 f67aa2f1e6383be7368b34aa5ec95faf 243 Gene3D G3DSA:1.10.10.10 139 238 4.3E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS20040 f67aa2f1e6383be7368b34aa5ec95faf 243 SMART SM00448 9 119 6.9E-39 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS20040 f67aa2f1e6383be7368b34aa5ec95faf 243 SMART SM00862 161 237 8.0E-24 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS09545 a37a2b51989bc31c00f4ace9efa8ca61 527 Gene3D G3DSA:1.10.101.10 180 257 4.5E-12 T 23-04-2016 IPR002477 Peptidoglycan binding-like RR42_RS09545 a37a2b51989bc31c00f4ace9efa8ca61 527 Pfam PF03734 L,D-transpeptidase catalytic domain 277 450 1.6E-29 T 23-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 RR42_RS09545 a37a2b51989bc31c00f4ace9efa8ca61 527 PANTHER PTHR41533 31 527 8.9E-79 T 23-04-2016 RR42_RS09545 a37a2b51989bc31c00f4ace9efa8ca61 527 SUPERFAMILY SSF47090 180 256 4.79E-11 T 23-04-2016 IPR002477 Peptidoglycan binding-like RR42_RS09545 a37a2b51989bc31c00f4ace9efa8ca61 527 SUPERFAMILY SSF141523 388 439 7.46E-15 T 23-04-2016 RR42_RS09545 a37a2b51989bc31c00f4ace9efa8ca61 527 SUPERFAMILY SSF141523 275 335 7.46E-15 T 23-04-2016 RR42_RS09545 a37a2b51989bc31c00f4ace9efa8ca61 527 PANTHER PTHR41533:SF1 31 527 8.9E-79 T 23-04-2016 RR42_RS09545 a37a2b51989bc31c00f4ace9efa8ca61 527 Pfam PF01471 Putative peptidoglycan binding domain 199 249 1.4E-5 T 23-04-2016 IPR002477 Peptidoglycan binding-like RR42_RS09545 a37a2b51989bc31c00f4ace9efa8ca61 527 Gene3D G3DSA:2.40.440.10 390 436 5.9E-7 T 23-04-2016 RR42_RS09545 a37a2b51989bc31c00f4ace9efa8ca61 527 Gene3D G3DSA:2.40.440.10 276 326 5.9E-7 T 23-04-2016 RR42_RS12835 f90b0c7a0165677f10a57b5867a9711b 315 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 190 247 6.5E-17 T 23-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal RR42_RS12835 f90b0c7a0165677f10a57b5867a9711b 315 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 18 227 3.8E-79 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS12835 f90b0c7a0165677f10a57b5867a9711b 315 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 17 313 19.562 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS12835 f90b0c7a0165677f10a57b5867a9711b 315 Gene3D G3DSA:2.30.130.10 252 314 1.2E-7 T 23-04-2016 IPR015947 PUA-like domain RR42_RS12835 f90b0c7a0165677f10a57b5867a9711b 315 PANTHER PTHR13767 10 313 3.0E-117 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS12835 f90b0c7a0165677f10a57b5867a9711b 315 PANTHER PTHR13767:SF2 10 313 3.0E-117 T 23-04-2016 RR42_RS12835 f90b0c7a0165677f10a57b5867a9711b 315 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 252 313 4.2E-12 T 23-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS12835 f90b0c7a0165677f10a57b5867a9711b 315 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 39 189 5.3E-56 T 23-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 RR42_RS12835 f90b0c7a0165677f10a57b5867a9711b 315 SUPERFAMILY SSF55120 16 248 8.06E-82 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RR42_RS12835 f90b0c7a0165677f10a57b5867a9711b 315 SUPERFAMILY SSF88697 252 314 6.96E-6 T 23-04-2016 IPR015947 PUA-like domain RR42_RS16990 d888cb52e1f15d46e1933bba98e2fb53 165 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 22 162 2.1E-11 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RR42_RS16990 d888cb52e1f15d46e1933bba98e2fb53 165 SUPERFAMILY SSF54534 23 164 9.62E-31 T 23-04-2016 RR42_RS16990 d888cb52e1f15d46e1933bba98e2fb53 165 Gene3D G3DSA:3.10.50.40 151 164 1.5E-17 T 23-04-2016 RR42_RS16990 d888cb52e1f15d46e1933bba98e2fb53 165 Gene3D G3DSA:3.10.50.40 19 100 1.5E-17 T 23-04-2016 RR42_RS03410 e57dbd843948028be81228aa31896fd7 170 Gene3D G3DSA:3.40.50.300 7 162 6.1E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03410 e57dbd843948028be81228aa31896fd7 170 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 12 140 1.5E-34 T 23-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 RR42_RS03410 e57dbd843948028be81228aa31896fd7 170 SUPERFAMILY SSF52540 37 137 2.03E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03410 e57dbd843948028be81228aa31896fd7 170 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 11 139 5.6E-32 T 23-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 RR42_RS03410 e57dbd843948028be81228aa31896fd7 170 PANTHER PTHR33540:SF2 5 159 9.6E-36 T 23-04-2016 RR42_RS03410 e57dbd843948028be81228aa31896fd7 170 PANTHER PTHR33540 5 159 9.6E-36 T 23-04-2016 RR42_RS37785 2ed270a9e65d12e91e05505d8a1a308d 158 PANTHER PTHR30349 2 152 7.1E-20 T 23-04-2016 RR42_RS37785 2ed270a9e65d12e91e05505d8a1a308d 158 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 2 154 1.7E-32 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS37785 2ed270a9e65d12e91e05505d8a1a308d 158 PANTHER PTHR30349:SF16 2 152 7.1E-20 T 23-04-2016 RR42_RS10755 1b4fb29d76f5a8901dbf1176dc131ef8 441 PANTHER PTHR37419:SF3 173 309 1.9E-16 T 23-04-2016 RR42_RS10755 1b4fb29d76f5a8901dbf1176dc131ef8 441 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 6 102 5.9E-8 T 23-04-2016 IPR017508 HipA, N-terminal subdomain 1 RR42_RS10755 1b4fb29d76f5a8901dbf1176dc131ef8 441 PANTHER PTHR37419 173 309 1.9E-16 T 23-04-2016 RR42_RS10755 1b4fb29d76f5a8901dbf1176dc131ef8 441 Pfam PF07804 HipA-like C-terminal domain 220 362 1.8E-26 T 23-04-2016 IPR012893 HipA-like, C-terminal RR42_RS10755 1b4fb29d76f5a8901dbf1176dc131ef8 441 Pfam PF13657 HipA N-terminal domain 6 102 1.5E-15 T 23-04-2016 IPR017508 HipA, N-terminal subdomain 1 RR42_RS10755 1b4fb29d76f5a8901dbf1176dc131ef8 441 Pfam PF07805 HipA-like N-terminal domain 142 214 9.9E-14 T 23-04-2016 IPR012894 HipA, N-terminal subdomain 2 RR42_RS02395 e2347fb3681562c3f53ea6152731f459 137 Pfam PF06155 Protein of unknown function (DUF971) 15 98 2.8E-30 T 23-04-2016 IPR010376 Domain of unknown function DUF971 Reactome: REACT_13|UniPathway: UPA00118 RR42_RS02395 e2347fb3681562c3f53ea6152731f459 137 PANTHER PTHR35303 8 123 2.9E-45 T 23-04-2016 RR42_RS02395 e2347fb3681562c3f53ea6152731f459 137 PANTHER PTHR35303:SF1 8 123 2.9E-45 T 23-04-2016 RR42_RS16280 1b049633ec188edd787137b917a85422 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS16280 1b049633ec188edd787137b917a85422 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS16280 1b049633ec188edd787137b917a85422 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS16280 1b049633ec188edd787137b917a85422 313 Gene3D G3DSA:3.40.190.10 91 179 1.1E-20 T 23-04-2016 RR42_RS16280 1b049633ec188edd787137b917a85422 313 PANTHER PTHR30126 1 309 6.5E-133 T 23-04-2016 RR42_RS16280 1b049633ec188edd787137b917a85422 313 PANTHER PTHR30126:SF6 1 309 6.5E-133 T 23-04-2016 RR42_RS16280 1b049633ec188edd787137b917a85422 313 SUPERFAMILY SSF46785 11 113 3.54E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS16280 1b049633ec188edd787137b917a85422 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 64 1.7E-14 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS16280 1b049633ec188edd787137b917a85422 313 Gene3D G3DSA:1.10.10.10 1 81 2.3E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS16280 1b049633ec188edd787137b917a85422 313 SUPERFAMILY SSF53850 91 300 6.88E-41 T 23-04-2016 RR42_RS16280 1b049633ec188edd787137b917a85422 313 Gene3D G3DSA:3.40.190.10 180 260 1.4E-25 T 23-04-2016 RR42_RS16280 1b049633ec188edd787137b917a85422 313 Pfam PF03466 LysR substrate binding domain 89 291 1.9E-40 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS14695 34c455718e5822f0a750e9d2cb717a2b 397 TIGRFAM TIGR00843 benE: benzoate transporter 6 388 2.4E-115 T 23-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 RR42_RS14695 34c455718e5822f0a750e9d2cb717a2b 397 PANTHER PTHR30199 10 397 7.6E-146 T 23-04-2016 RR42_RS14695 34c455718e5822f0a750e9d2cb717a2b 397 PANTHER PTHR30199:SF0 10 397 7.6E-146 T 23-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 RR42_RS14695 34c455718e5822f0a750e9d2cb717a2b 397 Pfam PF03594 Benzoate membrane transport protein 10 386 1.7E-144 T 23-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 RR42_RS12760 54d93b24be0805551d0e1bf0942b1f90 666 SUPERFAMILY SSF56436 443 665 1.18E-68 T 23-04-2016 IPR016187 C-type lectin fold RR42_RS12760 54d93b24be0805551d0e1bf0942b1f90 666 PANTHER PTHR23150 444 665 1.4E-63 T 23-04-2016 RR42_RS12760 54d93b24be0805551d0e1bf0942b1f90 666 Gene3D G3DSA:3.40.50.1460 44 134 2.5E-11 T 23-04-2016 IPR029030 Caspase-like domain RR42_RS12760 54d93b24be0805551d0e1bf0942b1f90 666 Pfam PF03781 Sulfatase-modifying factor enzyme 1 443 663 1.6E-58 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme RR42_RS12760 54d93b24be0805551d0e1bf0942b1f90 666 Gene3D G3DSA:3.90.1580.10 433 665 1.8E-66 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme RR42_RS12760 54d93b24be0805551d0e1bf0942b1f90 666 Pfam PF00656 Caspase domain 49 258 1.6E-28 T 23-04-2016 RR42_RS12760 54d93b24be0805551d0e1bf0942b1f90 666 SMART SM00115 40 263 0.0047 T 23-04-2016 IPR015917 Peptidase C14A, caspase catalytic domain GO:0006915|GO:0008234 RR42_RS12760 54d93b24be0805551d0e1bf0942b1f90 666 SUPERFAMILY SSF52129 36 261 2.39E-40 T 23-04-2016 IPR029030 Caspase-like domain RR42_RS10200 65ed50bd68aebab467b096b6a5010c24 99 Pfam PF00196 Bacterial regulatory proteins, luxR family 36 90 2.9E-17 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS10200 65ed50bd68aebab467b096b6a5010c24 99 Gene3D G3DSA:1.10.10.10 37 97 1.2E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS10200 65ed50bd68aebab467b096b6a5010c24 99 SUPERFAMILY SSF46894 25 97 4.08E-19 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS10200 65ed50bd68aebab467b096b6a5010c24 99 ProSitePatterns PS00622 LuxR-type HTH domain signature. 51 78 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS10200 65ed50bd68aebab467b096b6a5010c24 99 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 67 79 1.8E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS10200 65ed50bd68aebab467b096b6a5010c24 99 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 37 51 1.8E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS10200 65ed50bd68aebab467b096b6a5010c24 99 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 51 67 1.8E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS10200 65ed50bd68aebab467b096b6a5010c24 99 SMART SM00421 34 91 6.6E-16 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS06540 6af45698345c14a0af7c5ef101dd9b55 234 Pfam PF11180 Protein of unknown function (DUF2968) 47 214 1.0E-48 T 23-04-2016 IPR021350 Protein of unknown function DUF2968 RR42_RS05575 a938f28005ebaf79405fa06edd1db828 491 PANTHER PTHR22773:SF41 3 489 5.2E-158 T 23-04-2016 RR42_RS05575 a938f28005ebaf79405fa06edd1db828 491 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 5 478 17.783 T 23-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 RR42_RS05575 a938f28005ebaf79405fa06edd1db828 491 PANTHER PTHR22773 3 489 5.2E-158 T 23-04-2016 RR42_RS05575 a938f28005ebaf79405fa06edd1db828 491 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 477 2.1E-133 T 23-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 RR42_RS05575 a938f28005ebaf79405fa06edd1db828 491 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 2.8E-7 T 23-04-2016 RR42_RS05575 a938f28005ebaf79405fa06edd1db828 491 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 421 440 2.8E-7 T 23-04-2016 RR42_RS05575 a938f28005ebaf79405fa06edd1db828 491 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 308 320 2.8E-7 T 23-04-2016 RR42_RS05575 a938f28005ebaf79405fa06edd1db828 491 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 73 98 2.8E-7 T 23-04-2016 RR42_RS05575 a938f28005ebaf79405fa06edd1db828 491 Pfam PF00361 Proton-conducting membrane transporter 126 427 1.2E-73 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 RR42_RS09125 86dffbb75fee31b9016244ea28bd9e59 755 Gene3D G3DSA:3.90.1170.50 206 319 1.2E-20 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RR42_RS09125 86dffbb75fee31b9016244ea28bd9e59 755 SUPERFAMILY SSF56003 138 270 8.37E-43 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS09125 86dffbb75fee31b9016244ea28bd9e59 755 SUPERFAMILY SSF56003 16 102 8.37E-43 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS09125 86dffbb75fee31b9016244ea28bd9e59 755 SUPERFAMILY SSF56003 345 752 3.66E-114 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS09125 86dffbb75fee31b9016244ea28bd9e59 755 Gene3D G3DSA:3.30.365.10 552 753 8.1E-42 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS09125 86dffbb75fee31b9016244ea28bd9e59 755 PIRSF PIRSF036389 1 755 6.5E-252 T 23-04-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related RR42_RS09125 86dffbb75fee31b9016244ea28bd9e59 755 PANTHER PTHR11908:SF2 99 748 6.9E-159 T 23-04-2016 RR42_RS09125 86dffbb75fee31b9016244ea28bd9e59 755 PANTHER PTHR11908 99 748 6.9E-159 T 23-04-2016 RR42_RS09125 86dffbb75fee31b9016244ea28bd9e59 755 Gene3D G3DSA:3.30.365.10 349 465 6.2E-29 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS09125 86dffbb75fee31b9016244ea28bd9e59 755 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 344 580 3.9E-34 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS09125 86dffbb75fee31b9016244ea28bd9e59 755 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 623 707 1.4E-12 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS09125 86dffbb75fee31b9016244ea28bd9e59 755 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 46 101 3.7E-7 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS09125 86dffbb75fee31b9016244ea28bd9e59 755 Gene3D G3DSA:3.30.365.10 523 549 1.9E-38 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS09125 86dffbb75fee31b9016244ea28bd9e59 755 Gene3D G3DSA:3.30.365.10 138 204 1.9E-38 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS09125 86dffbb75fee31b9016244ea28bd9e59 755 Gene3D G3DSA:3.30.365.10 46 102 1.9E-38 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS09125 86dffbb75fee31b9016244ea28bd9e59 755 SMART SM01008 237 321 1.6E-17 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RR42_RS15850 12a12cbebea86cea8ec7448451d9ddfa 280 PANTHER PTHR10434 1 177 1.5E-37 T 23-04-2016 RR42_RS15850 12a12cbebea86cea8ec7448451d9ddfa 280 SMART SM00563 66 178 5.1E-33 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RR42_RS15850 12a12cbebea86cea8ec7448451d9ddfa 280 SUPERFAMILY SSF69593 21 195 1.96E-27 T 23-04-2016 RR42_RS15850 12a12cbebea86cea8ec7448451d9ddfa 280 Gene3D G3DSA:3.40.1130.10 39 160 1.6E-13 T 23-04-2016 RR42_RS15850 12a12cbebea86cea8ec7448451d9ddfa 280 Pfam PF01553 Acyltransferase 63 174 4.0E-24 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RR42_RS15850 12a12cbebea86cea8ec7448451d9ddfa 280 PANTHER PTHR10434:SF8 1 177 1.5E-37 T 23-04-2016 RR42_RS16965 c594fdc1785219d16c3f02f2255b1906 258 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 232 254 3.4E-11 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RR42_RS16965 c594fdc1785219d16c3f02f2255b1906 258 SUPERFAMILY SSF52540 7 254 4.64E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS16965 c594fdc1785219d16c3f02f2255b1906 258 Pfam PF00005 ABC transporter 23 183 1.4E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS16965 c594fdc1785219d16c3f02f2255b1906 258 PANTHER PTHR24220:SF358 130 255 5.1E-111 T 23-04-2016 RR42_RS16965 c594fdc1785219d16c3f02f2255b1906 258 PANTHER PTHR24220:SF358 9 114 5.1E-111 T 23-04-2016 RR42_RS16965 c594fdc1785219d16c3f02f2255b1906 258 SMART SM00382 32 238 6.1E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS16965 c594fdc1785219d16c3f02f2255b1906 258 Gene3D G3DSA:3.40.50.300 4 253 1.3E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS16965 c594fdc1785219d16c3f02f2255b1906 258 PANTHER PTHR24220 130 255 5.1E-111 T 23-04-2016 RR42_RS16965 c594fdc1785219d16c3f02f2255b1906 258 PANTHER PTHR24220 9 114 5.1E-111 T 23-04-2016 RR42_RS11220 ed76475ab7599503b8045f781085b054 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 310 1.5E-36 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS11220 ed76475ab7599503b8045f781085b054 311 PANTHER PTHR30465:SF0 3 311 7.0E-112 T 23-04-2016 RR42_RS11220 ed76475ab7599503b8045f781085b054 311 SUPERFAMILY SSF161098 90 294 1.41E-14 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS11220 ed76475ab7599503b8045f781085b054 311 PANTHER PTHR30465 3 311 7.0E-112 T 23-04-2016 RR42_RS12345 62720d2cd6894625e8e74caa9cd86c27 191 PANTHER PTHR33164 43 163 4.4E-19 T 23-04-2016 RR42_RS12345 62720d2cd6894625e8e74caa9cd86c27 191 SUPERFAMILY SSF46785 23 155 3.86E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS12345 62720d2cd6894625e8e74caa9cd86c27 191 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 2.6E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS12345 62720d2cd6894625e8e74caa9cd86c27 191 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 79 2.6E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS12345 62720d2cd6894625e8e74caa9cd86c27 191 PRINTS PR00598 Bacterial regulatory protein MarR family signature 129 149 2.6E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS12345 62720d2cd6894625e8e74caa9cd86c27 191 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 2.6E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS12345 62720d2cd6894625e8e74caa9cd86c27 191 Pfam PF01047 MarR family 47 104 4.1E-13 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS12345 62720d2cd6894625e8e74caa9cd86c27 191 SMART SM00347 38 139 1.4E-12 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS12345 62720d2cd6894625e8e74caa9cd86c27 191 Gene3D G3DSA:1.10.10.10 14 151 5.0E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS20585 deca2ae8523fcaebebfb3fd73e24161d 483 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 373 481 3.8E-23 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RR42_RS20585 deca2ae8523fcaebebfb3fd73e24161d 483 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 43 62 2.6E-33 T 23-04-2016 RR42_RS20585 deca2ae8523fcaebebfb3fd73e24161d 483 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 163 181 2.6E-33 T 23-04-2016 RR42_RS20585 deca2ae8523fcaebebfb3fd73e24161d 483 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 289 305 2.6E-33 T 23-04-2016 RR42_RS20585 deca2ae8523fcaebebfb3fd73e24161d 483 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 200 218 2.6E-33 T 23-04-2016 RR42_RS20585 deca2ae8523fcaebebfb3fd73e24161d 483 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 318 340 2.6E-33 T 23-04-2016 RR42_RS20585 deca2ae8523fcaebebfb3fd73e24161d 483 Gene3D G3DSA:3.50.50.60 40 166 4.8E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS20585 deca2ae8523fcaebebfb3fd73e24161d 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 290 304 2.5E-61 T 23-04-2016 RR42_RS20585 deca2ae8523fcaebebfb3fd73e24161d 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 333 340 2.5E-61 T 23-04-2016 RR42_RS20585 deca2ae8523fcaebebfb3fd73e24161d 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 369 390 2.5E-61 T 23-04-2016 RR42_RS20585 deca2ae8523fcaebebfb3fd73e24161d 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 74 89 2.5E-61 T 23-04-2016 RR42_RS20585 deca2ae8523fcaebebfb3fd73e24161d 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 200 225 2.5E-61 T 23-04-2016 RR42_RS20585 deca2ae8523fcaebebfb3fd73e24161d 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 42 64 2.5E-61 T 23-04-2016 RR42_RS20585 deca2ae8523fcaebebfb3fd73e24161d 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 437 452 2.5E-61 T 23-04-2016 RR42_RS20585 deca2ae8523fcaebebfb3fd73e24161d 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 459 479 2.5E-61 T 23-04-2016 RR42_RS20585 deca2ae8523fcaebebfb3fd73e24161d 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 166 175 2.5E-61 T 23-04-2016 RR42_RS20585 deca2ae8523fcaebebfb3fd73e24161d 483 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 42 353 2.4E-58 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS20585 deca2ae8523fcaebebfb3fd73e24161d 483 Gene3D G3DSA:3.30.390.30 373 481 1.1E-32 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RR42_RS20585 deca2ae8523fcaebebfb3fd73e24161d 483 Gene3D G3DSA:3.50.50.60 167 362 5.5E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS20585 deca2ae8523fcaebebfb3fd73e24161d 483 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 75 85 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RR42_RS20585 deca2ae8523fcaebebfb3fd73e24161d 483 PIRSF PIRSF000350 3 482 9.9E-79 T 23-04-2016 RR42_RS20585 deca2ae8523fcaebebfb3fd73e24161d 483 PANTHER PTHR22912 27 481 1.5E-133 T 23-04-2016 RR42_RS20585 deca2ae8523fcaebebfb3fd73e24161d 483 SUPERFAMILY SSF55424 371 481 4.98E-26 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RR42_RS20585 deca2ae8523fcaebebfb3fd73e24161d 483 SUPERFAMILY SSF51905 41 363 4.0E-53 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS20585 deca2ae8523fcaebebfb3fd73e24161d 483 PANTHER PTHR22912:SF106 27 481 1.5E-133 T 23-04-2016 RR42_RS17125 87d6cc7167c4f4491c4d275a1bbd755e 233 SUPERFAMILY SSF53474 31 209 4.59E-7 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS17125 87d6cc7167c4f4491c4d275a1bbd755e 233 Gene3D G3DSA:3.40.50.1820 40 157 4.8E-6 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS12150 57b5693e6858e2912a85e837240574d8 562 Gene3D G3DSA:2.40.160.50 187 560 1.8E-68 T 23-04-2016 RR42_RS12150 57b5693e6858e2912a85e837240574d8 562 PANTHER PTHR34597:SF1 63 562 9.1E-78 T 23-04-2016 RR42_RS12150 57b5693e6858e2912a85e837240574d8 562 Gene3D G3DSA:3.10.20.310 75 152 1.7E-13 T 23-04-2016 RR42_RS12150 57b5693e6858e2912a85e837240574d8 562 Pfam PF08479 POTRA domain, ShlB-type 78 152 7.1E-21 T 23-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type RR42_RS12150 57b5693e6858e2912a85e837240574d8 562 PANTHER PTHR34597 63 562 9.1E-78 T 23-04-2016 RR42_RS16690 2cd43e349b442d181d38f634e4ff2a85 116 PIRSF PIRSF007028 1 116 1.5E-49 T 23-04-2016 IPR009874 Protein of unknown function DUF1428 RR42_RS16690 2cd43e349b442d181d38f634e4ff2a85 116 Gene3D G3DSA:3.30.70.900 1 115 5.9E-54 T 23-04-2016 RR42_RS16690 2cd43e349b442d181d38f634e4ff2a85 116 SUPERFAMILY SSF54909 1 115 7.51E-51 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RR42_RS16690 2cd43e349b442d181d38f634e4ff2a85 116 Pfam PF07237 Protein of unknown function (DUF1428) 2 102 2.1E-45 T 23-04-2016 IPR009874 Protein of unknown function DUF1428 RR42_RS02315 1e5512b57a6cd6bc137d7689d7739a9f 508 SUPERFAMILY SSF53686 3 360 4.71E-96 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RR42_RS02315 1e5512b57a6cd6bc137d7689d7739a9f 508 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 6 507 9.3E-242 T 23-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 RR42_RS02315 1e5512b57a6cd6bc137d7689d7739a9f 508 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 425 507 3.6E-21 T 23-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 RR42_RS02315 1e5512b57a6cd6bc137d7689d7739a9f 508 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 324 413 1.2E-27 T 23-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 RR42_RS02315 1e5512b57a6cd6bc137d7689d7739a9f 508 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 20 311 1.8E-75 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RR42_RS02315 1e5512b57a6cd6bc137d7689d7739a9f 508 PANTHER PTHR10314 4 363 2.6E-203 T 23-04-2016 RR42_RS02315 1e5512b57a6cd6bc137d7689d7739a9f 508 Gene3D G3DSA:3.40.1020.10 334 507 8.3E-58 T 23-04-2016 RR42_RS02315 1e5512b57a6cd6bc137d7689d7739a9f 508 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 44 57 - T 23-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 RR42_RS02315 1e5512b57a6cd6bc137d7689d7739a9f 508 Gene3D G3DSA:3.40.50.1100 71 329 1.6E-80 T 23-04-2016 RR42_RS02315 1e5512b57a6cd6bc137d7689d7739a9f 508 SUPERFAMILY SSF55021 414 507 9.84E-27 T 23-04-2016 RR42_RS02315 1e5512b57a6cd6bc137d7689d7739a9f 508 PANTHER PTHR10314:SF30 4 363 2.6E-203 T 23-04-2016 RR42_RS19115 5b039f0bb78df0f579349d457a38d592 114 Pfam PF03091 CutA1 divalent ion tolerance protein 5 102 4.6E-34 T 23-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 RR42_RS19115 5b039f0bb78df0f579349d457a38d592 114 Gene3D G3DSA:3.30.70.830 2 107 1.6E-39 T 23-04-2016 RR42_RS19115 5b039f0bb78df0f579349d457a38d592 114 PANTHER PTHR23419 5 111 8.7E-39 T 23-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 RR42_RS19115 5b039f0bb78df0f579349d457a38d592 114 SUPERFAMILY SSF54913 2 105 1.45E-36 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta RR42_RS20155 7997c0e5c6c4fbff1f01ba0a32fe2dfa 138 Gene3D G3DSA:2.60.15.10 3 90 3.0E-31 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RR42_RS20155 7997c0e5c6c4fbff1f01ba0a32fe2dfa 138 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 83 1.3E-30 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RR42_RS20155 7997c0e5c6c4fbff1f01ba0a32fe2dfa 138 SUPERFAMILY SSF51344 3 85 8.89E-25 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RR42_RS20155 7997c0e5c6c4fbff1f01ba0a32fe2dfa 138 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 131 3.8E-8 T 23-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain RR42_RS20155 7997c0e5c6c4fbff1f01ba0a32fe2dfa 138 Gene3D G3DSA:1.20.5.440 91 131 1.5E-14 T 23-04-2016 RR42_RS20155 7997c0e5c6c4fbff1f01ba0a32fe2dfa 138 PANTHER PTHR13822 1 138 9.6E-44 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RR42_RS20155 7997c0e5c6c4fbff1f01ba0a32fe2dfa 138 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 131 1.1E-43 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RR42_RS20155 7997c0e5c6c4fbff1f01ba0a32fe2dfa 138 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 21.586 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RR42_RS20155 7997c0e5c6c4fbff1f01ba0a32fe2dfa 138 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 89 4.0E-38 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RR42_RS20155 7997c0e5c6c4fbff1f01ba0a32fe2dfa 138 SUPERFAMILY SSF46604 87 135 4.18E-12 T 23-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain RR42_RS19800 86f1af95180f62ad66be9ee210cda9e7 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.1E-19 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS19800 86f1af95180f62ad66be9ee210cda9e7 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 1.1E-19 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS19800 86f1af95180f62ad66be9ee210cda9e7 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.1E-19 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS19800 86f1af95180f62ad66be9ee210cda9e7 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.1E-19 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS19800 86f1af95180f62ad66be9ee210cda9e7 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 1.1E-19 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS19800 86f1af95180f62ad66be9ee210cda9e7 273 PANTHER PTHR24322 17 144 8.7E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS19800 86f1af95180f62ad66be9ee210cda9e7 273 PANTHER PTHR24322 160 192 8.7E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS19800 86f1af95180f62ad66be9ee210cda9e7 273 Gene3D G3DSA:3.40.50.720 8 253 7.0E-68 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS19800 86f1af95180f62ad66be9ee210cda9e7 273 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 252 1.5E-52 T 23-04-2016 RR42_RS19800 86f1af95180f62ad66be9ee210cda9e7 273 PANTHER PTHR24322:SF427 17 144 8.7E-47 T 23-04-2016 RR42_RS19800 86f1af95180f62ad66be9ee210cda9e7 273 PANTHER PTHR24322:SF427 160 192 8.7E-47 T 23-04-2016 RR42_RS19800 86f1af95180f62ad66be9ee210cda9e7 273 SUPERFAMILY SSF51735 12 253 6.47E-67 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS17450 49db23538e79701b0acabd7dcbd98de8 196 SUPERFAMILY SSF81342 21 193 1.18E-36 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RR42_RS17450 49db23538e79701b0acabd7dcbd98de8 196 Pfam PF01292 Prokaryotic cytochrome b561 23 193 8.8E-31 T 23-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RR42_RS17450 49db23538e79701b0acabd7dcbd98de8 196 PANTHER PTHR30529:SF5 15 193 3.7E-57 T 23-04-2016 RR42_RS17450 49db23538e79701b0acabd7dcbd98de8 196 PANTHER PTHR30529 15 193 3.7E-57 T 23-04-2016 RR42_RS00430 df7866ee3220b9921304b8de158249d5 230 PANTHER PTHR26402:SF578 1 224 1.0E-38 T 23-04-2016 RR42_RS00430 df7866ee3220b9921304b8de158249d5 230 SMART SM00448 1 113 2.8E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS00430 df7866ee3220b9921304b8de158249d5 230 SMART SM00862 148 224 2.2E-12 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS00430 df7866ee3220b9921304b8de158249d5 230 Pfam PF00072 Response regulator receiver domain 3 113 7.8E-12 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS00430 df7866ee3220b9921304b8de158249d5 230 PANTHER PTHR26402 1 224 1.0E-38 T 23-04-2016 RR42_RS00430 df7866ee3220b9921304b8de158249d5 230 Gene3D G3DSA:1.10.10.10 129 224 2.2E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS00430 df7866ee3220b9921304b8de158249d5 230 SUPERFAMILY SSF52172 1 182 1.48E-24 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS00430 df7866ee3220b9921304b8de158249d5 230 Gene3D G3DSA:3.40.50.2300 1 120 6.0E-22 T 23-04-2016 RR42_RS00430 df7866ee3220b9921304b8de158249d5 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 221 3.5E-14 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS03835 fbc7b56720c0286759f876446a87eeb5 223 PANTHER PTHR30183 4 215 3.7E-67 T 23-04-2016 RR42_RS03835 fbc7b56720c0286759f876446a87eeb5 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 211 3.6E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS03835 fbc7b56720c0286759f876446a87eeb5 223 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 10 210 5.1E-71 T 23-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 RR42_RS03835 fbc7b56720c0286759f876446a87eeb5 223 SUPERFAMILY SSF161098 4 214 4.19E-50 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS03835 fbc7b56720c0286759f876446a87eeb5 223 Gene3D G3DSA:1.10.3720.10 4 214 6.0E-46 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS17990 396e2c123e8de618c45a4e9a9d07161c 293 PANTHER PTHR30487 66 287 8.7E-105 T 23-04-2016 RR42_RS17990 396e2c123e8de618c45a4e9a9d07161c 293 Pfam PF01478 Type IV leader peptidase family 144 252 2.7E-25 T 23-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 RR42_RS17990 396e2c123e8de618c45a4e9a9d07161c 293 PANTHER PTHR30487:SF0 66 287 8.7E-105 T 23-04-2016 RR42_RS17990 396e2c123e8de618c45a4e9a9d07161c 293 PANTHER PTHR30487:SF0 10 46 8.7E-105 T 23-04-2016 RR42_RS17990 396e2c123e8de618c45a4e9a9d07161c 293 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 209 219 9.5E-28 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RR42_RS17990 396e2c123e8de618c45a4e9a9d07161c 293 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 220 231 9.5E-28 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RR42_RS17990 396e2c123e8de618c45a4e9a9d07161c 293 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 152 169 9.5E-28 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RR42_RS17990 396e2c123e8de618c45a4e9a9d07161c 293 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 232 247 9.5E-28 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RR42_RS17990 396e2c123e8de618c45a4e9a9d07161c 293 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 28 133 4.5E-32 T 23-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RR42_RS17990 396e2c123e8de618c45a4e9a9d07161c 293 PANTHER PTHR30487 10 46 8.7E-105 T 23-04-2016 RR42_RS11815 777decd85421393532fd83f1c20d2b16 267 SUPERFAMILY SSF51161 2 266 2.17E-74 T 23-04-2016 IPR011004 Trimeric LpxA-like RR42_RS11815 777decd85421393532fd83f1c20d2b16 267 Gene3D G3DSA:1.20.1180.10 197 267 1.4E-23 T 23-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RR42_RS11815 777decd85421393532fd83f1c20d2b16 267 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 149 177 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 RR42_RS11815 777decd85421393532fd83f1c20d2b16 267 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 176 266 7.1E-26 T 23-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RR42_RS11815 777decd85421393532fd83f1c20d2b16 267 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 266 9.7E-102 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RR42_RS11815 777decd85421393532fd83f1c20d2b16 267 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 267 45.979 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RR42_RS11815 777decd85421393532fd83f1c20d2b16 267 PIRSF PIRSF000456 1 267 2.8E-101 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RR42_RS11815 777decd85421393532fd83f1c20d2b16 267 PANTHER PTHR23416 1 259 9.5E-118 T 23-04-2016 RR42_RS11815 777decd85421393532fd83f1c20d2b16 267 Gene3D G3DSA:2.160.10.10 2 185 2.6E-49 T 23-04-2016 RR42_RS11815 777decd85421393532fd83f1c20d2b16 267 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 139 6.7E-9 T 23-04-2016 IPR001451 Hexapeptide repeat RR42_RS11815 777decd85421393532fd83f1c20d2b16 267 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 31 66 1.2E-5 T 23-04-2016 IPR001451 Hexapeptide repeat RR42_RS11815 777decd85421393532fd83f1c20d2b16 267 PANTHER PTHR23416:SF8 1 259 9.5E-118 T 23-04-2016 RR42_RS20780 1c90906e82c7c9c77e80dcd630d0dcb7 392 PANTHER PTHR23028:SF53 1 362 1.4E-48 T 23-04-2016 RR42_RS20780 1c90906e82c7c9c77e80dcd630d0dcb7 392 Pfam PF01757 Acyltransferase family 1 337 3.7E-27 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 RR42_RS20780 1c90906e82c7c9c77e80dcd630d0dcb7 392 PANTHER PTHR23028 1 362 1.4E-48 T 23-04-2016 RR42_RS02235 aea111fbab32eb099bc17e3a6f974550 311 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RR42_RS02235 aea111fbab32eb099bc17e3a6f974550 311 SUPERFAMILY SSF51735 98 286 6.23E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS02235 aea111fbab32eb099bc17e3a6f974550 311 PANTHER PTHR10996 1 307 2.7E-102 T 23-04-2016 RR42_RS02235 aea111fbab32eb099bc17e3a6f974550 311 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RR42_RS02235 aea111fbab32eb099bc17e3a6f974550 311 PANTHER PTHR10996:SF20 1 307 2.7E-102 T 23-04-2016 RR42_RS02235 aea111fbab32eb099bc17e3a6f974550 311 Gene3D G3DSA:3.40.50.720 108 286 7.1E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS02235 aea111fbab32eb099bc17e3a6f974550 311 SUPERFAMILY SSF52283 3 132 1.57E-28 T 23-04-2016 RR42_RS02235 aea111fbab32eb099bc17e3a6f974550 311 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 11 307 1.0E-23 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RR42_RS02235 aea111fbab32eb099bc17e3a6f974550 311 Gene3D G3DSA:3.40.50.720 5 107 6.3E-28 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS02235 aea111fbab32eb099bc17e3a6f974550 311 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 285 5.7E-57 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RR42_RS26995 3d8ab601e0608cc90b4c93dba2ec8a09 96 Gene3D G3DSA:3.40.50.360 23 95 1.7E-12 T 23-04-2016 IPR029039 Flavoprotein-like domain RR42_RS26995 3d8ab601e0608cc90b4c93dba2ec8a09 96 ProSitePatterns PS00201 Flavodoxin signature. 29 45 - T 23-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 RR42_RS26995 3d8ab601e0608cc90b4c93dba2ec8a09 96 PANTHER PTHR30546 9 96 2.5E-14 T 23-04-2016 RR42_RS26995 3d8ab601e0608cc90b4c93dba2ec8a09 96 SUPERFAMILY SSF52218 24 95 1.35E-13 T 23-04-2016 IPR029039 Flavoprotein-like domain RR42_RS10985 7321c682d4a6769e1c6d75e006ba0f7b 329 PANTHER PTHR10366 2 323 5.5E-84 T 23-04-2016 RR42_RS10985 7321c682d4a6769e1c6d75e006ba0f7b 329 SUPERFAMILY SSF51735 1 322 5.22E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10985 7321c682d4a6769e1c6d75e006ba0f7b 329 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 203 9.9E-23 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RR42_RS10985 7321c682d4a6769e1c6d75e006ba0f7b 329 Gene3D G3DSA:3.90.25.10 193 306 2.4E-38 T 23-04-2016 RR42_RS10985 7321c682d4a6769e1c6d75e006ba0f7b 329 Gene3D G3DSA:3.40.50.720 1 192 4.5E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10985 7321c682d4a6769e1c6d75e006ba0f7b 329 PANTHER PTHR10366:SF228 2 323 5.5E-84 T 23-04-2016 RR42_RS16805 63fb23bab08dfb18d464760ba7258536 139 SUPERFAMILY SSF54637 5 139 8.08E-30 T 23-04-2016 IPR029069 HotDog domain RR42_RS16805 63fb23bab08dfb18d464760ba7258536 139 PANTHER PTHR13078 6 120 2.7E-12 T 23-04-2016 RR42_RS16805 63fb23bab08dfb18d464760ba7258536 139 Gene3D G3DSA:3.10.129.10 6 139 4.3E-31 T 23-04-2016 IPR029069 HotDog domain RR42_RS16805 63fb23bab08dfb18d464760ba7258536 139 Pfam PF01575 MaoC like domain 22 120 8.0E-18 T 23-04-2016 IPR002539 MaoC-like domain RR42_RS20825 7aa3f2d9e25b9104ee3a2c884016fbe3 78 PANTHER PTHR36582:SF1 1 78 8.4E-26 T 23-04-2016 RR42_RS20825 7aa3f2d9e25b9104ee3a2c884016fbe3 78 Gene3D G3DSA:1.10.1220.10 4 40 4.6E-9 T 23-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 RR42_RS20825 7aa3f2d9e25b9104ee3a2c884016fbe3 78 SUPERFAMILY SSF47598 1 43 2.56E-11 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RR42_RS20825 7aa3f2d9e25b9104ee3a2c884016fbe3 78 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 6 67 1.5E-6 T 23-04-2016 IPR022789 Antitoxin ParD RR42_RS20825 7aa3f2d9e25b9104ee3a2c884016fbe3 78 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 3 64 1.7E-15 T 23-04-2016 IPR022789 Antitoxin ParD RR42_RS20825 7aa3f2d9e25b9104ee3a2c884016fbe3 78 PANTHER PTHR36582 1 78 8.4E-26 T 23-04-2016 RR42_RS06515 155add36ef807eb0095254ff9f778115 561 PANTHER PTHR10617:SF107 12 484 9.1E-253 T 23-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 RR42_RS06515 155add36ef807eb0095254ff9f778115 561 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 188 203 3.1E-6 T 23-04-2016 RR42_RS06515 155add36ef807eb0095254ff9f778115 561 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 19 41 3.1E-6 T 23-04-2016 RR42_RS06515 155add36ef807eb0095254ff9f778115 561 SUPERFAMILY SSF54862 461 560 1.37E-29 T 23-04-2016 RR42_RS06515 155add36ef807eb0095254ff9f778115 561 SUPERFAMILY SSF54373 221 315 1.69E-38 T 23-04-2016 RR42_RS06515 155add36ef807eb0095254ff9f778115 561 Pfam PF13450 NAD(P)-binding Rossmann-like domain 22 67 6.6E-7 T 23-04-2016 RR42_RS06515 155add36ef807eb0095254ff9f778115 561 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 457 558 1.6E-51 T 23-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 RR42_RS06515 155add36ef807eb0095254ff9f778115 561 SUPERFAMILY SSF51905 14 219 1.47E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS06515 155add36ef807eb0095254ff9f778115 561 SUPERFAMILY SSF51905 316 459 1.47E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS06515 155add36ef807eb0095254ff9f778115 561 Gene3D G3DSA:3.50.50.60 16 291 1.5E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS06515 155add36ef807eb0095254ff9f778115 561 PANTHER PTHR10617 12 484 9.1E-253 T 23-04-2016 RR42_RS06515 155add36ef807eb0095254ff9f778115 561 Gene3D G3DSA:3.30.70.20 504 545 5.4E-4 T 23-04-2016 RR42_RS05635 4cdf3912e818509c3ee64707f80878f7 530 Pfam PF02653 Branched-chain amino acid transport system / permease component 236 512 1.5E-52 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RR42_RS05635 4cdf3912e818509c3ee64707f80878f7 530 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 235 526 4.6E-128 T 23-04-2016 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type RR42_RS05635 4cdf3912e818509c3ee64707f80878f7 530 PANTHER PTHR11795 91 529 5.6E-154 T 23-04-2016 RR42_RS05635 4cdf3912e818509c3ee64707f80878f7 530 PANTHER PTHR11795:SF349 91 529 5.6E-154 T 23-04-2016 RR42_RS09015 c3fdd29ddfb03c62649a58d90a32df61 453 PANTHER PTHR30560 1 445 3.3E-106 T 23-04-2016 RR42_RS09015 c3fdd29ddfb03c62649a58d90a32df61 453 SUPERFAMILY SSF102735 1 131 1.19E-29 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RR42_RS09015 c3fdd29ddfb03c62649a58d90a32df61 453 PIRSF PIRSF003095 1 449 3.0E-126 T 23-04-2016 IPR005215 Trigger factor GO:0015031 RR42_RS09015 c3fdd29ddfb03c62649a58d90a32df61 453 Pfam PF05697 Bacterial trigger factor protein (TF) 2 143 1.2E-32 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RR42_RS09015 c3fdd29ddfb03c62649a58d90a32df61 453 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 274 427 4.4E-37 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 RR42_RS09015 c3fdd29ddfb03c62649a58d90a32df61 453 SUPERFAMILY SSF109998 261 443 4.02E-50 T 23-04-2016 IPR027304 Trigger factor/SurA domain RR42_RS09015 c3fdd29ddfb03c62649a58d90a32df61 453 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 168 249 3.6E-14 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RR42_RS09015 c3fdd29ddfb03c62649a58d90a32df61 453 Gene3D G3DSA:3.30.70.1050 1 119 6.6E-29 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RR42_RS09015 c3fdd29ddfb03c62649a58d90a32df61 453 PANTHER PTHR30560:SF3 1 445 3.3E-106 T 23-04-2016 RR42_RS09015 c3fdd29ddfb03c62649a58d90a32df61 453 Gene3D G3DSA:1.10.3120.10 216 404 1.6E-62 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 RR42_RS09015 c3fdd29ddfb03c62649a58d90a32df61 453 TIGRFAM TIGR00115 tig: trigger factor 12 426 2.9E-126 T 23-04-2016 IPR005215 Trigger factor GO:0015031 RR42_RS09015 c3fdd29ddfb03c62649a58d90a32df61 453 Hamap MF_00303 Trigger factor [tig]. 1 433 20.791 T 23-04-2016 IPR005215 Trigger factor GO:0015031 RR42_RS09015 c3fdd29ddfb03c62649a58d90a32df61 453 SUPERFAMILY SSF54534 101 253 8.04E-30 T 23-04-2016 RR42_RS18505 c9acfb7394ee7b0ad7de8de2acb29060 374 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 107 4.6E-12 T 23-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 RR42_RS18505 c9acfb7394ee7b0ad7de8de2acb29060 374 SUPERFAMILY SSF55347 120 371 7.85E-59 T 23-04-2016 RR42_RS18505 c9acfb7394ee7b0ad7de8de2acb29060 374 Gene3D G3DSA:3.30.360.10 124 270 2.6E-19 T 23-04-2016 RR42_RS18505 c9acfb7394ee7b0ad7de8de2acb29060 374 Gene3D G3DSA:3.40.50.720 1 123 4.2E-11 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS18505 c9acfb7394ee7b0ad7de8de2acb29060 374 SUPERFAMILY SSF51735 1 178 1.35E-22 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS18505 c9acfb7394ee7b0ad7de8de2acb29060 374 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 119 350 4.1E-13 T 23-04-2016 IPR032095 Saccharopine dehydrogenase, C-terminal RR42_RS01870 8af8d75c209b828d7f7848877ead77f9 169 Pfam PF10003 Integral membrane protein (DUF2244) 31 166 9.8E-45 T 23-04-2016 IPR019253 Protein of unknown function DUF2244, transmembrane RR42_RS01870 8af8d75c209b828d7f7848877ead77f9 169 PIRSF PIRSF032162 1 168 4.4E-43 T 23-04-2016 IPR016990 Uncharacterised conserved protein UCP032162, transmembrane RR42_RS10285 099026196dce2ea20cfb5819b22b6cdd 187 PANTHER PTHR30328:SF18 12 181 1.1E-22 T 23-04-2016 RR42_RS10285 099026196dce2ea20cfb5819b22b6cdd 187 SUPERFAMILY SSF48498 81 180 3.31E-24 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RR42_RS10285 099026196dce2ea20cfb5819b22b6cdd 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 3.1E-9 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS10285 099026196dce2ea20cfb5819b22b6cdd 187 SUPERFAMILY SSF46689 6 74 2.77E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS10285 099026196dce2ea20cfb5819b22b6cdd 187 PANTHER PTHR30328 12 181 1.1E-22 T 23-04-2016 RR42_RS10285 099026196dce2ea20cfb5819b22b6cdd 187 Gene3D G3DSA:1.10.10.60 10 60 3.5E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS10285 099026196dce2ea20cfb5819b22b6cdd 187 Gene3D G3DSA:1.10.357.10 61 180 3.4E-35 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS03385 609c16abd36dcaa660ca592187acdf48 309 SUPERFAMILY SSF53613 10 297 6.86E-57 T 23-04-2016 IPR029056 Ribokinase-like RR42_RS03385 609c16abd36dcaa660ca592187acdf48 309 PANTHER PTHR10584:SF161 10 302 2.8E-61 T 23-04-2016 RR42_RS03385 609c16abd36dcaa660ca592187acdf48 309 Pfam PF00294 pfkB family carbohydrate kinase 24 293 3.3E-41 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB RR42_RS03385 609c16abd36dcaa660ca592187acdf48 309 Gene3D G3DSA:3.40.1190.20 9 304 3.7E-57 T 23-04-2016 IPR029056 Ribokinase-like RR42_RS03385 609c16abd36dcaa660ca592187acdf48 309 PANTHER PTHR10584 10 302 2.8E-61 T 23-04-2016 RR42_RS18085 e5d1598ee1540f116f832da4a904c47f 508 SUPERFAMILY SSF53623 122 268 2.09E-45 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS18085 e5d1598ee1540f116f832da4a904c47f 508 SUPERFAMILY SSF53623 302 359 2.09E-45 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS18085 e5d1598ee1540f116f832da4a904c47f 508 Gene3D G3DSA:3.40.50.720 5 101 4.2E-19 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS18085 e5d1598ee1540f116f832da4a904c47f 508 PANTHER PTHR23135 4 504 2.8E-134 T 23-04-2016 RR42_RS18085 e5d1598ee1540f116f832da4a904c47f 508 PANTHER PTHR23135:SF2 4 504 2.8E-134 T 23-04-2016 RR42_RS18085 e5d1598ee1540f116f832da4a904c47f 508 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 500 32.584 T 23-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS18085 e5d1598ee1540f116f832da4a904c47f 508 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 125 149 - T 23-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 RR42_RS18085 e5d1598ee1540f116f832da4a904c47f 508 Gene3D G3DSA:3.40.1190.10 102 266 1.5E-69 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS18085 e5d1598ee1540f116f832da4a904c47f 508 Gene3D G3DSA:3.40.1190.10 300 361 1.5E-69 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS18085 e5d1598ee1540f116f832da4a904c47f 508 SUPERFAMILY SSF51984 5 102 1.06E-14 T 23-04-2016 RR42_RS18085 e5d1598ee1540f116f832da4a904c47f 508 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 498 5.1E-112 T 23-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS18085 e5d1598ee1540f116f832da4a904c47f 508 Pfam PF08245 Mur ligase middle domain 127 342 3.0E-28 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RR42_RS18085 e5d1598ee1540f116f832da4a904c47f 508 Pfam PF02875 Mur ligase family, glutamate ligase domain 363 434 8.4E-8 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RR42_RS18085 e5d1598ee1540f116f832da4a904c47f 508 Gene3D G3DSA:3.90.190.20 363 497 4.3E-47 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RR42_RS18085 e5d1598ee1540f116f832da4a904c47f 508 SUPERFAMILY SSF53244 361 500 3.89E-42 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RR42_RS07870 3ed2d78363e4ad0b9ca719076f0a4a61 182 Gene3D G3DSA:3.40.30.10 3 181 2.1E-51 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS07870 3ed2d78363e4ad0b9ca719076f0a4a61 182 SUPERFAMILY SSF52833 18 181 7.14E-44 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS07870 3ed2d78363e4ad0b9ca719076f0a4a61 182 PANTHER PTHR10681:SF87 11 182 1.8E-73 T 23-04-2016 RR42_RS07870 3ed2d78363e4ad0b9ca719076f0a4a61 182 PANTHER PTHR10681 11 182 1.8E-73 T 23-04-2016 RR42_RS07870 3ed2d78363e4ad0b9ca719076f0a4a61 182 Pfam PF00578 AhpC/TSA family 28 143 4.4E-25 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 RR42_RS07870 3ed2d78363e4ad0b9ca719076f0a4a61 182 PIRSF PIRSF000239 1 182 1.8E-40 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 RR42_RS02245 b8a0868e4d619c7a9ad57fa46be370d0 93 Pfam PF08666 SAF domain 11 89 1.6E-5 T 23-04-2016 IPR013974 SAF domain RR42_RS02245 b8a0868e4d619c7a9ad57fa46be370d0 93 PANTHER PTHR30536 1 90 8.9E-12 T 23-04-2016 RR42_RS02245 b8a0868e4d619c7a9ad57fa46be370d0 93 PANTHER PTHR30536:SF5 1 90 8.9E-12 T 23-04-2016 RR42_RS02245 b8a0868e4d619c7a9ad57fa46be370d0 93 SMART SM00858 11 89 6.4E-9 T 23-04-2016 IPR013974 SAF domain RR42_RS16415 a9aa4b2d778b6f38fb760ddb043b44e5 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 1.5E-17 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS16415 a9aa4b2d778b6f38fb760ddb043b44e5 210 PANTHER PTHR30055 4 206 2.7E-28 T 23-04-2016 RR42_RS16415 a9aa4b2d778b6f38fb760ddb043b44e5 210 Gene3D G3DSA:1.10.10.60 7 60 9.3E-22 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS16415 a9aa4b2d778b6f38fb760ddb043b44e5 210 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 154 206 3.5E-5 T 23-04-2016 RR42_RS16415 a9aa4b2d778b6f38fb760ddb043b44e5 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 6.0E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS16415 a9aa4b2d778b6f38fb760ddb043b44e5 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 6.0E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS16415 a9aa4b2d778b6f38fb760ddb043b44e5 210 PANTHER PTHR30055:SF76 4 206 2.7E-28 T 23-04-2016 RR42_RS16415 a9aa4b2d778b6f38fb760ddb043b44e5 210 Gene3D G3DSA:1.10.357.10 61 208 7.3E-23 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS16415 a9aa4b2d778b6f38fb760ddb043b44e5 210 SUPERFAMILY SSF46689 9 78 3.89E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS13160 67426bf61497f057ba44ac525149a434 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.9E-37 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS13160 67426bf61497f057ba44ac525149a434 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.9E-37 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS13160 67426bf61497f057ba44ac525149a434 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.9E-37 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS13160 67426bf61497f057ba44ac525149a434 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.9E-37 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS13160 67426bf61497f057ba44ac525149a434 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.9E-37 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS13160 67426bf61497f057ba44ac525149a434 141 SUPERFAMILY SSF54919 1 139 2.1E-56 T 23-04-2016 RR42_RS13160 67426bf61497f057ba44ac525149a434 141 PANTHER PTHR11349 1 134 5.9E-67 T 23-04-2016 RR42_RS13160 67426bf61497f057ba44ac525149a434 141 Pfam PF00334 Nucleoside diphosphate kinase 4 135 2.4E-54 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS13160 67426bf61497f057ba44ac525149a434 141 SMART SM00562 3 140 4.6E-79 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS13160 67426bf61497f057ba44ac525149a434 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.186 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS13160 67426bf61497f057ba44ac525149a434 141 Gene3D G3DSA:3.30.70.141 1 138 1.6E-57 T 23-04-2016 RR42_RS18900 48868b3d9357e74ab30441f698ac68d1 207 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 4 198 4.9E-59 T 23-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 RR42_RS18900 48868b3d9357e74ab30441f698ac68d1 207 PANTHER PTHR33508:SF1 1 207 8.6E-70 T 23-04-2016 RR42_RS18900 48868b3d9357e74ab30441f698ac68d1 207 PANTHER PTHR33508 1 207 8.6E-70 T 23-04-2016 RR42_RS18900 48868b3d9357e74ab30441f698ac68d1 207 Pfam PF01914 MarC family integral membrane protein 4 201 7.0E-59 T 23-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 RR42_RS17295 b8f9421526590916d1cf7b76176e505c 175 PANTHER PTHR23091:SF251 1 154 2.3E-24 T 23-04-2016 RR42_RS17295 b8f9421526590916d1cf7b76176e505c 175 Pfam PF00583 Acetyltransferase (GNAT) family 74 144 8.3E-16 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RR42_RS17295 b8f9421526590916d1cf7b76176e505c 175 PANTHER PTHR23091 1 154 2.3E-24 T 23-04-2016 RR42_RS17295 b8f9421526590916d1cf7b76176e505c 175 SUPERFAMILY SSF55729 1 170 9.45E-29 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS17295 b8f9421526590916d1cf7b76176e505c 175 Gene3D G3DSA:3.40.630.30 1 169 1.6E-28 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS18625 d27cb9c65d8246a9e9355e65fa6174c3 337 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 60 329 1.4E-64 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS18625 d27cb9c65d8246a9e9355e65fa6174c3 337 PIRSF PIRSF017082 4 336 6.2E-67 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS18625 d27cb9c65d8246a9e9355e65fa6174c3 337 PANTHER PTHR30349:SF1 21 299 2.4E-71 T 23-04-2016 RR42_RS18625 d27cb9c65d8246a9e9355e65fa6174c3 337 PANTHER PTHR30349 21 299 2.4E-71 T 23-04-2016 RR42_RS18625 d27cb9c65d8246a9e9355e65fa6174c3 337 SUPERFAMILY SSF53850 170 298 3.8E-7 T 23-04-2016 RR42_RS06630 7591f03ea923abcd761a02f0d4f2d244 138 PANTHER PTHR33175:SF2 39 130 6.7E-48 T 23-04-2016 RR42_RS06630 7591f03ea923abcd761a02f0d4f2d244 138 SMART SM00411 39 128 5.7E-40 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RR42_RS06630 7591f03ea923abcd761a02f0d4f2d244 138 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 37 133 29.696 T 23-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 RR42_RS06630 7591f03ea923abcd761a02f0d4f2d244 138 PANTHER PTHR33175 39 130 6.7E-48 T 23-04-2016 RR42_RS06630 7591f03ea923abcd761a02f0d4f2d244 138 PRINTS PR01727 Prokaryotic integration host factor signature 112 126 6.5E-13 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RR42_RS06630 7591f03ea923abcd761a02f0d4f2d244 138 PRINTS PR01727 Prokaryotic integration host factor signature 96 109 6.5E-13 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RR42_RS06630 7591f03ea923abcd761a02f0d4f2d244 138 PRINTS PR01727 Prokaryotic integration host factor signature 78 93 6.5E-13 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RR42_RS06630 7591f03ea923abcd761a02f0d4f2d244 138 Pfam PF00216 Bacterial DNA-binding protein 39 126 5.6E-29 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RR42_RS06630 7591f03ea923abcd761a02f0d4f2d244 138 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 38 132 2.2E-43 T 23-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 RR42_RS06630 7591f03ea923abcd761a02f0d4f2d244 138 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 84 103 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 RR42_RS06630 7591f03ea923abcd761a02f0d4f2d244 138 Gene3D G3DSA:4.10.520.10 38 129 8.5E-35 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RR42_RS06630 7591f03ea923abcd761a02f0d4f2d244 138 SUPERFAMILY SSF47729 39 129 7.95E-31 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RR42_RS10255 5a5fd8760ffe05dd213b237da26c2d6d 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 2.0E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10255 5a5fd8760ffe05dd213b237da26c2d6d 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 2.0E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10255 5a5fd8760ffe05dd213b237da26c2d6d 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 2.0E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10255 5a5fd8760ffe05dd213b237da26c2d6d 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 2.0E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10255 5a5fd8760ffe05dd213b237da26c2d6d 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 2.0E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10255 5a5fd8760ffe05dd213b237da26c2d6d 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 2.0E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10255 5a5fd8760ffe05dd213b237da26c2d6d 260 PANTHER PTHR24322 17 146 1.9E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10255 5a5fd8760ffe05dd213b237da26c2d6d 260 PANTHER PTHR24322 166 198 1.9E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10255 5a5fd8760ffe05dd213b237da26c2d6d 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 258 6.1E-56 T 23-04-2016 RR42_RS10255 5a5fd8760ffe05dd213b237da26c2d6d 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 2.3E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10255 5a5fd8760ffe05dd213b237da26c2d6d 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 2.3E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10255 5a5fd8760ffe05dd213b237da26c2d6d 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 2.3E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10255 5a5fd8760ffe05dd213b237da26c2d6d 260 Gene3D G3DSA:3.40.50.720 4 258 8.7E-81 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10255 5a5fd8760ffe05dd213b237da26c2d6d 260 SUPERFAMILY SSF51735 8 259 5.03E-76 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10255 5a5fd8760ffe05dd213b237da26c2d6d 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RR42_RS16505 ff4d6b1198de9c93ea888e7a9ab5a14c 551 SMART SM00044 316 522 0.0011 T 23-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 RR42_RS16505 ff4d6b1198de9c93ea888e7a9ab5a14c 551 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 363 514 6.3E-15 T 23-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 RR42_RS16505 ff4d6b1198de9c93ea888e7a9ab5a14c 551 SUPERFAMILY SSF54292 252 339 9.16E-17 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS16505 ff4d6b1198de9c93ea888e7a9ab5a14c 551 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 255 331 2.0E-7 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RR42_RS16505 ff4d6b1198de9c93ea888e7a9ab5a14c 551 PANTHER PTHR11920 306 515 3.8E-34 T 23-04-2016 RR42_RS16505 ff4d6b1198de9c93ea888e7a9ab5a14c 551 SUPERFAMILY SSF81343 7 196 1.31E-16 T 23-04-2016 RR42_RS16505 ff4d6b1198de9c93ea888e7a9ab5a14c 551 Gene3D G3DSA:3.10.20.30 252 338 1.4E-16 T 23-04-2016 IPR012675 Beta-grasp domain RR42_RS16505 ff4d6b1198de9c93ea888e7a9ab5a14c 551 SUPERFAMILY SSF55073 358 543 3.45E-36 T 23-04-2016 IPR029787 Nucleotide cyclase RR42_RS16505 ff4d6b1198de9c93ea888e7a9ab5a14c 551 Gene3D G3DSA:3.30.70.1230 363 542 2.1E-23 T 23-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 RR42_RS16505 ff4d6b1198de9c93ea888e7a9ab5a14c 551 PANTHER PTHR11920:SF325 306 515 3.8E-34 T 23-04-2016 RR42_RS08075 7dc2d9c33ecde0cddfda27de1b741269 581 SUPERFAMILY SSF52540 233 269 1.61E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS08075 7dc2d9c33ecde0cddfda27de1b741269 581 SUPERFAMILY SSF52540 332 367 1.61E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS08075 7dc2d9c33ecde0cddfda27de1b741269 581 SUPERFAMILY SSF52540 452 518 1.61E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS08075 7dc2d9c33ecde0cddfda27de1b741269 581 SUPERFAMILY SSF52540 1 131 1.61E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS08075 7dc2d9c33ecde0cddfda27de1b741269 581 Gene3D G3DSA:3.40.50.300 333 334 6.8E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS08075 7dc2d9c33ecde0cddfda27de1b741269 581 Gene3D G3DSA:3.40.50.300 1 124 6.8E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS08075 7dc2d9c33ecde0cddfda27de1b741269 581 Gene3D G3DSA:3.40.50.300 448 518 6.8E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS08075 7dc2d9c33ecde0cddfda27de1b741269 581 Pfam PF13476 AAA domain 6 59 1.1E-8 T 23-04-2016 RR42_RS19480 8741fa4c1137609d7c330690f42b8c8f 155 Pfam PF13633 Prokaryotic N-terminal methylation site 21 44 8.3E-10 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS19480 8741fa4c1137609d7c330690f42b8c8f 155 PRINTS PR00813 Bacterial general secretion pathway protein G signature 22 47 3.7E-17 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RR42_RS19480 8741fa4c1137609d7c330690f42b8c8f 155 PRINTS PR00813 Bacterial general secretion pathway protein G signature 58 76 3.7E-17 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RR42_RS19480 8741fa4c1137609d7c330690f42b8c8f 155 Pfam PF08334 Type II secretion system (T2SS), protein G 45 154 1.4E-44 T 23-04-2016 IPR013545 Type II secretion system protein G RR42_RS19480 8741fa4c1137609d7c330690f42b8c8f 155 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 21 43 1.6E-8 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS19480 8741fa4c1137609d7c330690f42b8c8f 155 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 21 155 9.0E-61 T 23-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 RR42_RS19480 8741fa4c1137609d7c330690f42b8c8f 155 PANTHER PTHR30093:SF9 17 155 4.6E-69 T 23-04-2016 RR42_RS19480 8741fa4c1137609d7c330690f42b8c8f 155 SUPERFAMILY SSF54523 49 155 8.89E-41 T 23-04-2016 RR42_RS19480 8741fa4c1137609d7c330690f42b8c8f 155 PANTHER PTHR30093 17 155 4.6E-69 T 23-04-2016 RR42_RS19480 8741fa4c1137609d7c330690f42b8c8f 155 Gene3D G3DSA:3.30.700.10 23 89 9.9E-10 T 23-04-2016 RR42_RS19480 8741fa4c1137609d7c330690f42b8c8f 155 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 21 41 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS18380 a8c2b50d6548629bee4dddf31934ab7c 80 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 25 65 5.9E-8 T 23-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) RR42_RS11765 3f22e08b0078174ab876e4bf138647b5 115 Gene3D G3DSA:3.10.20.280 9 96 1.1E-29 T 23-04-2016 IPR005346 RnfH protein RR42_RS11765 3f22e08b0078174ab876e4bf138647b5 115 PANTHER PTHR37483 9 114 1.2E-25 T 23-04-2016 RR42_RS11765 3f22e08b0078174ab876e4bf138647b5 115 SUPERFAMILY SSF54285 12 86 4.18E-22 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RR42_RS11765 3f22e08b0078174ab876e4bf138647b5 115 PANTHER PTHR37483:SF1 9 114 1.2E-25 T 23-04-2016 RR42_RS11765 3f22e08b0078174ab876e4bf138647b5 115 Pfam PF03658 RnfH family Ubiquitin 13 93 3.2E-28 T 23-04-2016 IPR005346 RnfH protein RR42_RS11765 3f22e08b0078174ab876e4bf138647b5 115 Hamap MF_00460 Protein RnfH [rnfH]. 12 102 22.659 T 23-04-2016 IPR005346 RnfH protein RR42_RS03255 eb5c40fef0d08784fb37ada92e72d2f7 166 PANTHER PTHR37315 9 166 1.9E-38 T 23-04-2016 RR42_RS03255 eb5c40fef0d08784fb37ada92e72d2f7 166 PANTHER PTHR37315:SF1 9 166 1.9E-38 T 23-04-2016 RR42_RS03255 eb5c40fef0d08784fb37ada92e72d2f7 166 Gene3D G3DSA:2.40.160.20 9 165 7.1E-49 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RR42_RS03255 eb5c40fef0d08784fb37ada92e72d2f7 166 Pfam PF11578 Protein of unknown function (DUF3237) 13 165 2.5E-39 T 23-04-2016 IPR020915 Uncharacterised protein family UPF0311 RR42_RS00370 b6cbf10aef77f8e0e98e86f864845116 242 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 219 4.3E-8 T 23-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RR42_RS00370 b6cbf10aef77f8e0e98e86f864845116 242 PIRSF PIRSF015736 1 242 1.0E-68 T 23-04-2016 IPR026286 Maleate isomerase/Arylmalonate decarboxylase RR42_RS00370 b6cbf10aef77f8e0e98e86f864845116 242 PANTHER PTHR40267 1 240 2.8E-49 T 23-04-2016 RR42_RS12585 aeb4926c7c5bb4d00719b879c7e2c3c6 463 SMART SM00382 213 411 7.6E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS12585 aeb4926c7c5bb4d00719b879c7e2c3c6 463 SUPERFAMILY SSF48024 14 125 2.48E-37 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RR42_RS12585 aeb4926c7c5bb4d00719b879c7e2c3c6 463 Pfam PF03796 DnaB-like helicase C terminal domain 196 451 4.4E-118 T 23-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 RR42_RS12585 aeb4926c7c5bb4d00719b879c7e2c3c6 463 Gene3D G3DSA:3.40.50.300 180 453 6.7E-107 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12585 aeb4926c7c5bb4d00719b879c7e2c3c6 463 Gene3D G3DSA:1.10.860.10 16 118 1.6E-38 T 23-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RR42_RS12585 aeb4926c7c5bb4d00719b879c7e2c3c6 463 PANTHER PTHR30153 1 461 4.5E-209 T 23-04-2016 RR42_RS12585 aeb4926c7c5bb4d00719b879c7e2c3c6 463 Pfam PF00772 DnaB-like helicase N terminal domain 16 117 3.8E-35 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RR42_RS12585 aeb4926c7c5bb4d00719b879c7e2c3c6 463 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 16 452 5.3E-179 T 23-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 RR42_RS12585 aeb4926c7c5bb4d00719b879c7e2c3c6 463 SUPERFAMILY SSF52540 194 444 1.17E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS06380 4b3a56fa89fa7fb442540f17357e9f1c 130 SUPERFAMILY SSF51905 41 123 1.24E-11 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS06380 4b3a56fa89fa7fb442540f17357e9f1c 130 Gene3D G3DSA:3.50.50.60 43 103 1.0E-4 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS00355 bf6d9fd7acbb3cfd9eddf66d266e93fb 315 Pfam PF04321 RmlD substrate binding domain 4 227 1.6E-7 T 23-04-2016 IPR029903 RmlD-like substrate binding domain RR42_RS00355 bf6d9fd7acbb3cfd9eddf66d266e93fb 315 Gene3D G3DSA:3.40.50.720 2 240 8.7E-20 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS00355 bf6d9fd7acbb3cfd9eddf66d266e93fb 315 SUPERFAMILY SSF51735 4 304 2.24E-30 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS18330 2a375335fde8d60700273a4242d7b5c6 584 SUPERFAMILY SSF161098 70 266 3.14E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS18330 2a375335fde8d60700273a4242d7b5c6 584 Gene3D G3DSA:1.10.3720.10 69 263 1.4E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS18330 2a375335fde8d60700273a4242d7b5c6 584 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 263 4.2E-12 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS18330 2a375335fde8d60700273a4242d7b5c6 584 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 399 567 2.2E-13 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS18330 2a375335fde8d60700273a4242d7b5c6 584 SUPERFAMILY SSF161098 379 569 7.96E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS18330 2a375335fde8d60700273a4242d7b5c6 584 PANTHER PTHR30151:SF10 376 581 3.4E-156 T 23-04-2016 RR42_RS18330 2a375335fde8d60700273a4242d7b5c6 584 PANTHER PTHR30151:SF10 76 234 3.4E-156 T 23-04-2016 RR42_RS18330 2a375335fde8d60700273a4242d7b5c6 584 PANTHER PTHR30151 376 581 3.4E-156 T 23-04-2016 RR42_RS18330 2a375335fde8d60700273a4242d7b5c6 584 PANTHER PTHR30151 76 234 3.4E-156 T 23-04-2016 RR42_RS18330 2a375335fde8d60700273a4242d7b5c6 584 Gene3D G3DSA:1.10.3720.10 382 570 8.4E-15 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS24405 7238f1d2300284e9fea7696e2edd4199 147 SUPERFAMILY SSF53474 4 145 2.61E-14 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS24405 7238f1d2300284e9fea7696e2edd4199 147 Gene3D G3DSA:3.40.50.1820 8 145 5.3E-28 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS09480 1a684aba0bbf24f66e38059fa0617358 244 Pfam PF00005 ABC transporter 19 167 5.4E-37 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS09480 1a684aba0bbf24f66e38059fa0617358 244 PANTHER PTHR24220 5 239 2.7E-119 T 23-04-2016 RR42_RS09480 1a684aba0bbf24f66e38059fa0617358 244 PIRSF PIRSF039085 1 242 8.9E-103 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RR42_RS09480 1a684aba0bbf24f66e38059fa0617358 244 PANTHER PTHR24220:SF550 5 239 2.7E-119 T 23-04-2016 RR42_RS09480 1a684aba0bbf24f66e38059fa0617358 244 SMART SM00382 28 215 1.2E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS09480 1a684aba0bbf24f66e38059fa0617358 244 Gene3D G3DSA:3.40.50.300 2 239 1.3E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS09480 1a684aba0bbf24f66e38059fa0617358 244 SUPERFAMILY SSF52540 3 237 2.48E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS09480 1a684aba0bbf24f66e38059fa0617358 244 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS20645 52983b7cce5e4f1ea6fe514e145cb6ba 410 PANTHER PTHR30158:SF3 1 396 2.7E-153 T 23-04-2016 RR42_RS20645 52983b7cce5e4f1ea6fe514e145cb6ba 410 Gene3D G3DSA:2.40.50.100 171 205 1.8E-23 T 23-04-2016 RR42_RS20645 52983b7cce5e4f1ea6fe514e145cb6ba 410 Gene3D G3DSA:2.40.50.100 63 96 1.8E-23 T 23-04-2016 RR42_RS20645 52983b7cce5e4f1ea6fe514e145cb6ba 410 Pfam PF13437 HlyD family secretion protein 174 286 5.7E-6 T 23-04-2016 RR42_RS20645 52983b7cce5e4f1ea6fe514e145cb6ba 410 Pfam PF13533 Biotin-lipoyl like 64 111 1.6E-11 T 23-04-2016 RR42_RS20645 52983b7cce5e4f1ea6fe514e145cb6ba 410 SUPERFAMILY SSF111369 51 298 8.76E-80 T 23-04-2016 RR42_RS20645 52983b7cce5e4f1ea6fe514e145cb6ba 410 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 371 6.9E-82 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RR42_RS20645 52983b7cce5e4f1ea6fe514e145cb6ba 410 PANTHER PTHR30158 1 396 2.7E-153 T 23-04-2016 RR42_RS04790 93652913563092bb9165820bd8284bd5 306 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 279 2.1E-31 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RR42_RS04790 93652913563092bb9165820bd8284bd5 306 PANTHER PTHR32196:SF33 8 304 8.2E-103 T 23-04-2016 RR42_RS04790 93652913563092bb9165820bd8284bd5 306 PANTHER PTHR32196 8 304 8.2E-103 T 23-04-2016 RR42_RS16435 7e8490ebc7a35a5270739fd991fc9aab 334 SUPERFAMILY SSF51735 1 322 3.06E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS16435 7e8490ebc7a35a5270739fd991fc9aab 334 PANTHER PTHR10366 2 319 5.7E-47 T 23-04-2016 RR42_RS16435 7e8490ebc7a35a5270739fd991fc9aab 334 Gene3D G3DSA:3.40.50.720 1 200 6.3E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS16435 7e8490ebc7a35a5270739fd991fc9aab 334 Gene3D G3DSA:3.90.25.10 201 326 4.6E-5 T 23-04-2016 RR42_RS16435 7e8490ebc7a35a5270739fd991fc9aab 334 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 236 2.7E-36 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RR42_RS12140 20592df47a3838c4a1741289d743eca4 327 SUPERFAMILY SSF49401 180 326 2.14E-17 T 23-04-2016 IPR008966 Adhesion domain RR42_RS12140 20592df47a3838c4a1741289d743eca4 327 PANTHER PTHR33420 181 327 1.6E-14 T 23-04-2016 RR42_RS12140 20592df47a3838c4a1741289d743eca4 327 Pfam PF00419 Fimbrial protein 179 326 6.5E-9 T 23-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RR42_RS12140 20592df47a3838c4a1741289d743eca4 327 Gene3D G3DSA:2.60.40.1090 180 326 4.1E-17 T 23-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RR42_RS09280 75c6981061a884e25b89c0380103a392 208 Pfam PF14521 Lysine-specific metallo-endopeptidase 50 199 4.6E-17 T 23-04-2016 IPR029463 Lysine-specific metallo-endopeptidase GO:0004222 RR42_RS09280 75c6981061a884e25b89c0380103a392 208 SUPERFAMILY SSF55486 21 203 5.86E-13 T 23-04-2016 RR42_RS09280 75c6981061a884e25b89c0380103a392 208 Gene3D G3DSA:3.40.390.10 13 201 1.2E-24 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RR42_RS09280 75c6981061a884e25b89c0380103a392 208 SMART SM01351 42 201 4.6E-15 T 23-04-2016 IPR029463 Lysine-specific metallo-endopeptidase GO:0004222 RR42_RS11080 0a4f2f24be97f52505d26a1ed4c9980c 59 Gene3D G3DSA:3.10.129.10 19 54 2.2E-4 T 23-04-2016 IPR029069 HotDog domain RR42_RS02940 dade8f69565400b081c78441e673bed5 212 Gene3D G3DSA:3.30.460.10 136 196 3.8E-4 T 23-04-2016 RR42_RS02940 dade8f69565400b081c78441e673bed5 212 TIGRFAM TIGR03135 malonate_mdcG: malonate decarboxylase holo-[acyl-carrier-protein] synthase 8 206 8.1E-46 T 23-04-2016 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 RR42_RS02940 dade8f69565400b081c78441e673bed5 212 Pfam PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG 8 207 3.6E-48 T 23-04-2016 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 RR42_RS25225 7639d99892c49bdfd2f8dc544d8b6517 107 SUPERFAMILY SSF55205 1 107 4.25E-29 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 RR42_RS25225 7639d99892c49bdfd2f8dc544d8b6517 107 PANTHER PTHR21090 1 107 3.3E-43 T 23-04-2016 RR42_RS25225 7639d99892c49bdfd2f8dc544d8b6517 107 ProSitePatterns PS00104 EPSP synthase signature 1. 59 73 - T 23-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RR42_RS25225 7639d99892c49bdfd2f8dc544d8b6517 107 Gene3D G3DSA:3.65.10.10 1 107 3.7E-34 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RR42_RS25225 7639d99892c49bdfd2f8dc544d8b6517 107 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 1 107 1.6E-34 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RR42_RS25225 7639d99892c49bdfd2f8dc544d8b6517 107 PANTHER PTHR21090:SF21 1 107 3.3E-43 T 23-04-2016 RR42_RS02735 3cd6ea4b8e40b739d671262dffa948bf 415 PANTHER PTHR13789:SF214 11 410 2.3E-95 T 23-04-2016 RR42_RS02735 3cd6ea4b8e40b739d671262dffa948bf 415 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 308 323 4.7E-15 T 23-04-2016 RR42_RS02735 3cd6ea4b8e40b739d671262dffa948bf 415 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 323 339 4.7E-15 T 23-04-2016 RR42_RS02735 3cd6ea4b8e40b739d671262dffa948bf 415 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 13 35 4.7E-15 T 23-04-2016 RR42_RS02735 3cd6ea4b8e40b739d671262dffa948bf 415 Pfam PF01494 FAD binding domain 12 347 5.0E-21 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 RR42_RS02735 3cd6ea4b8e40b739d671262dffa948bf 415 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 13 410 5.1E-101 T 23-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 RR42_RS02735 3cd6ea4b8e40b739d671262dffa948bf 415 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 322 335 - T 23-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 RR42_RS02735 3cd6ea4b8e40b739d671262dffa948bf 415 SUPERFAMILY SSF51905 11 200 1.87E-37 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS02735 3cd6ea4b8e40b739d671262dffa948bf 415 SUPERFAMILY SSF51905 304 411 1.87E-37 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS02735 3cd6ea4b8e40b739d671262dffa948bf 415 PANTHER PTHR13789 11 410 2.3E-95 T 23-04-2016 RR42_RS02735 3cd6ea4b8e40b739d671262dffa948bf 415 Gene3D G3DSA:3.50.50.60 306 344 7.5E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS02735 3cd6ea4b8e40b739d671262dffa948bf 415 Gene3D G3DSA:3.50.50.60 8 198 7.5E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS19920 5ef0207db10ffabae1fd52cf2939dc58 128 PANTHER PTHR40043:SF1 1 128 3.0E-24 T 23-04-2016 RR42_RS19920 5ef0207db10ffabae1fd52cf2939dc58 128 PANTHER PTHR40043 1 128 3.0E-24 T 23-04-2016 RR42_RS19920 5ef0207db10ffabae1fd52cf2939dc58 128 Pfam PF03994 Domain of Unknown Function (DUF350) 12 63 4.9E-13 T 23-04-2016 IPR007140 Protein of unknown function DUF350 RR42_RS19920 5ef0207db10ffabae1fd52cf2939dc58 128 Pfam PF03994 Domain of Unknown Function (DUF350) 75 127 4.4E-7 T 23-04-2016 IPR007140 Protein of unknown function DUF350 RR42_RS19425 0f853a8ca9c6cddcaac4a5b4a0f9eca5 92 SUPERFAMILY SSF160272 5 90 4.58E-16 T 23-04-2016 IPR009962 Protein of unknown function DUF1488 RR42_RS19425 0f853a8ca9c6cddcaac4a5b4a0f9eca5 92 Pfam PF07369 Protein of unknown function (DUF1488) 4 81 3.1E-22 T 23-04-2016 IPR009962 Protein of unknown function DUF1488 RR42_RS19425 0f853a8ca9c6cddcaac4a5b4a0f9eca5 92 Gene3D G3DSA:3.30.160.140 4 75 7.7E-9 T 23-04-2016 IPR009962 Protein of unknown function DUF1488 RR42_RS18135 f7b91bcfbe6ebe7908ebfaaf92d94e65 338 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 56 333 3.2E-92 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS18135 f7b91bcfbe6ebe7908ebfaaf92d94e65 338 PANTHER PTHR30349:SF16 1 323 5.4E-104 T 23-04-2016 RR42_RS18135 f7b91bcfbe6ebe7908ebfaaf92d94e65 338 SUPERFAMILY SSF53850 123 295 3.26E-8 T 23-04-2016 RR42_RS18135 f7b91bcfbe6ebe7908ebfaaf92d94e65 338 PANTHER PTHR30349 1 323 5.4E-104 T 23-04-2016 RR42_RS18135 f7b91bcfbe6ebe7908ebfaaf92d94e65 338 PIRSF PIRSF017082 1 337 1.5E-81 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS05335 583f748a33bd1d5ed46fd071fcc783ef 785 PANTHER PTHR11908:SF66 25 783 0.0 T 23-04-2016 RR42_RS05335 583f748a33bd1d5ed46fd071fcc783ef 785 SMART SM01008 39 146 7.5E-48 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RR42_RS05335 583f748a33bd1d5ed46fd071fcc783ef 785 PANTHER PTHR11908 25 783 0.0 T 23-04-2016 RR42_RS05335 583f748a33bd1d5ed46fd071fcc783ef 785 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 167 709 5.1E-199 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS05335 583f748a33bd1d5ed46fd071fcc783ef 785 Gene3D G3DSA:3.30.365.10 467 635 5.5E-56 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS05335 583f748a33bd1d5ed46fd071fcc783ef 785 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 40 145 7.0E-27 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RR42_RS05335 583f748a33bd1d5ed46fd071fcc783ef 785 SUPERFAMILY SSF54665 23 147 1.7E-40 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RR42_RS05335 583f748a33bd1d5ed46fd071fcc783ef 785 Gene3D G3DSA:3.30.365.10 636 777 3.2E-85 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS05335 583f748a33bd1d5ed46fd071fcc783ef 785 Gene3D G3DSA:3.30.365.10 366 466 3.2E-85 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS05335 583f748a33bd1d5ed46fd071fcc783ef 785 Gene3D G3DSA:3.90.1170.50 25 145 2.6E-42 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RR42_RS05335 583f748a33bd1d5ed46fd071fcc783ef 785 Gene3D G3DSA:3.30.365.10 147 193 8.2E-23 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS05335 583f748a33bd1d5ed46fd071fcc783ef 785 Gene3D G3DSA:3.30.365.10 290 365 8.2E-23 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS05335 583f748a33bd1d5ed46fd071fcc783ef 785 SUPERFAMILY SSF56003 147 778 1.31E-201 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS05335 583f748a33bd1d5ed46fd071fcc783ef 785 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 25 780 0.0 T 23-04-2016 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 RR42_RS05335 583f748a33bd1d5ed46fd071fcc783ef 785 Gene3D G3DSA:3.30.365.10 194 288 2.2E-33 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS16800 7d4d7341b77cc3ea92f3c853d28dbc71 276 SUPERFAMILY SSF51735 6 274 9.5E-73 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS16800 7d4d7341b77cc3ea92f3c853d28dbc71 276 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 187 0.0015 T 23-04-2016 RR42_RS16800 7d4d7341b77cc3ea92f3c853d28dbc71 276 PANTHER PTHR24322 142 150 4.4E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16800 7d4d7341b77cc3ea92f3c853d28dbc71 276 PANTHER PTHR24322 166 197 4.4E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16800 7d4d7341b77cc3ea92f3c853d28dbc71 276 PANTHER PTHR24322 12 123 4.4E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16800 7d4d7341b77cc3ea92f3c853d28dbc71 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.0E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16800 7d4d7341b77cc3ea92f3c853d28dbc71 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 4.0E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16800 7d4d7341b77cc3ea92f3c853d28dbc71 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 4.0E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16800 7d4d7341b77cc3ea92f3c853d28dbc71 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 237 257 4.0E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16800 7d4d7341b77cc3ea92f3c853d28dbc71 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.0E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16800 7d4d7341b77cc3ea92f3c853d28dbc71 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 4.0E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16800 7d4d7341b77cc3ea92f3c853d28dbc71 276 Gene3D G3DSA:3.40.50.720 1 274 3.0E-76 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS16800 7d4d7341b77cc3ea92f3c853d28dbc71 276 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 274 7.9E-48 T 23-04-2016 RR42_RS16800 7d4d7341b77cc3ea92f3c853d28dbc71 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 1.1E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16800 7d4d7341b77cc3ea92f3c853d28dbc71 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 1.1E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16800 7d4d7341b77cc3ea92f3c853d28dbc71 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.1E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS16800 7d4d7341b77cc3ea92f3c853d28dbc71 276 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RR42_RS16800 7d4d7341b77cc3ea92f3c853d28dbc71 276 PANTHER PTHR24322:SF328 142 150 4.4E-40 T 23-04-2016 RR42_RS16800 7d4d7341b77cc3ea92f3c853d28dbc71 276 PANTHER PTHR24322:SF328 166 197 4.4E-40 T 23-04-2016 RR42_RS16800 7d4d7341b77cc3ea92f3c853d28dbc71 276 PANTHER PTHR24322:SF328 12 123 4.4E-40 T 23-04-2016 RR42_RS18765 abe771c77c6c56d56ff429eb99c7b7d6 767 Gene3D G3DSA:3.40.50.300 1 176 9.3E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18765 abe771c77c6c56d56ff429eb99c7b7d6 767 Gene3D G3DSA:3.40.50.300 239 415 9.3E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18765 abe771c77c6c56d56ff429eb99c7b7d6 767 SUPERFAMILY SSF52540 241 272 7.52E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18765 abe771c77c6c56d56ff429eb99c7b7d6 767 SUPERFAMILY SSF52540 1 98 7.52E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18765 abe771c77c6c56d56ff429eb99c7b7d6 767 SUPERFAMILY SSF52540 303 417 7.52E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18765 abe771c77c6c56d56ff429eb99c7b7d6 767 Pfam PF13175 AAA ATPase domain 1 53 8.1E-14 T 23-04-2016 RR42_RS18765 abe771c77c6c56d56ff429eb99c7b7d6 767 Pfam PF13175 AAA ATPase domain 202 415 9.4E-29 T 23-04-2016 RR42_RS17455 433a560116572f22cb9acbb21db11ad2 458 Gene3D G3DSA:1.10.275.10 5 121 3.2E-45 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal RR42_RS17455 433a560116572f22cb9acbb21db11ad2 458 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 15 458 8.0E-125 T 23-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 RR42_RS17455 433a560116572f22cb9acbb21db11ad2 458 Pfam PF00206 Lyase 17 315 7.1E-57 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal RR42_RS17455 433a560116572f22cb9acbb21db11ad2 458 Pfam PF08328 Adenylosuccinate lyase C-terminal 334 448 6.8E-50 T 23-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 RR42_RS17455 433a560116572f22cb9acbb21db11ad2 458 ProSitePatterns PS00163 Fumarate lyases signature. 297 306 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 RR42_RS17455 433a560116572f22cb9acbb21db11ad2 458 Gene3D G3DSA:1.10.40.30 392 448 1.0E-30 T 23-04-2016 RR42_RS17455 433a560116572f22cb9acbb21db11ad2 458 Gene3D G3DSA:1.20.200.10 122 391 3.5E-86 T 23-04-2016 RR42_RS17455 433a560116572f22cb9acbb21db11ad2 458 PANTHER PTHR11444:SF17 7 458 2.3E-269 T 23-04-2016 RR42_RS17455 433a560116572f22cb9acbb21db11ad2 458 PRINTS PR00149 Fumarate lyase superfamily signature 254 281 3.2E-18 T 23-04-2016 IPR000362 Fumarate lyase family RR42_RS17455 433a560116572f22cb9acbb21db11ad2 458 PRINTS PR00149 Fumarate lyase superfamily signature 165 183 3.2E-18 T 23-04-2016 IPR000362 Fumarate lyase family RR42_RS17455 433a560116572f22cb9acbb21db11ad2 458 PRINTS PR00149 Fumarate lyase superfamily signature 297 313 3.2E-18 T 23-04-2016 IPR000362 Fumarate lyase family RR42_RS17455 433a560116572f22cb9acbb21db11ad2 458 PRINTS PR00149 Fumarate lyase superfamily signature 119 137 3.2E-18 T 23-04-2016 IPR000362 Fumarate lyase family RR42_RS17455 433a560116572f22cb9acbb21db11ad2 458 SUPERFAMILY SSF48557 7 451 8.01E-106 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 RR42_RS17455 433a560116572f22cb9acbb21db11ad2 458 PANTHER PTHR11444 7 458 2.3E-269 T 23-04-2016 IPR000362 Fumarate lyase family RR42_RS20595 ea14d4c789a295dc6178737b0a502493 128 Gene3D G3DSA:3.10.129.10 10 127 5.6E-38 T 23-04-2016 IPR029069 HotDog domain RR42_RS20595 ea14d4c789a295dc6178737b0a502493 128 SUPERFAMILY SSF54637 9 127 3.23E-27 T 23-04-2016 IPR029069 HotDog domain RR42_RS20595 ea14d4c789a295dc6178737b0a502493 128 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 13 126 2.7E-14 T 23-04-2016 IPR003736 Phenylacetic acid degradation-related domain RR42_RS20595 ea14d4c789a295dc6178737b0a502493 128 PANTHER PTHR21660 5 128 5.8E-23 T 23-04-2016 RR42_RS20595 ea14d4c789a295dc6178737b0a502493 128 PANTHER PTHR21660:SF7 5 128 5.8E-23 T 23-04-2016 RR42_RS20595 ea14d4c789a295dc6178737b0a502493 128 Pfam PF03061 Thioesterase superfamily 42 117 3.7E-13 T 23-04-2016 IPR006683 Thioesterase domain RR42_RS14785 12d2cc681c7a8de438908de2bb4b21e8 102 Pfam PF09413 Putative prokaryotic signal transducing protein 1 66 5.7E-7 T 23-04-2016 IPR018551 Domain of unknown function DUF2007 RR42_RS04625 526eb6a080ef198012f4eb7a9c4ce2a6 235 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 55 235 23.256 T 23-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 RR42_RS04625 526eb6a080ef198012f4eb7a9c4ce2a6 235 Pfam PF05239 PRC-barrel domain 158 230 3.6E-10 T 23-04-2016 IPR027275 PRC-barrel domain RR42_RS04625 526eb6a080ef198012f4eb7a9c4ce2a6 235 Gene3D G3DSA:2.40.30.60 49 155 5.8E-30 T 23-04-2016 IPR002676 RimM protein GO:0006364 RR42_RS04625 526eb6a080ef198012f4eb7a9c4ce2a6 235 SUPERFAMILY SSF50447 54 154 8.47E-16 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RR42_RS04625 526eb6a080ef198012f4eb7a9c4ce2a6 235 Pfam PF01782 RimM N-terminal domain 57 152 2.0E-20 T 23-04-2016 IPR002676 RimM protein GO:0006364 RR42_RS04625 526eb6a080ef198012f4eb7a9c4ce2a6 235 Gene3D G3DSA:2.30.30.240 161 235 3.0E-25 T 23-04-2016 RR42_RS04625 526eb6a080ef198012f4eb7a9c4ce2a6 235 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 56 232 4.9E-40 T 23-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 RR42_RS04625 526eb6a080ef198012f4eb7a9c4ce2a6 235 PANTHER PTHR33692 19 234 2.8E-41 T 23-04-2016 RR42_RS04625 526eb6a080ef198012f4eb7a9c4ce2a6 235 SUPERFAMILY SSF50346 161 232 2.55E-18 T 23-04-2016 IPR011033 PRC-barrel-like RR42_RS14990 bb5935895571f7c0ce36f27f34169ebc 424 Pfam PF03486 HI0933-like protein 19 410 2.7E-136 T 23-04-2016 RR42_RS14990 bb5935895571f7c0ce36f27f34169ebc 424 PANTHER PTHR10617 6 303 2.5E-106 T 23-04-2016 RR42_RS14990 bb5935895571f7c0ce36f27f34169ebc 424 PANTHER PTHR10617 348 417 2.5E-106 T 23-04-2016 RR42_RS14990 bb5935895571f7c0ce36f27f34169ebc 424 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 21 410 2.1E-114 T 23-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like RR42_RS14990 bb5935895571f7c0ce36f27f34169ebc 424 Gene3D G3DSA:1.10.8.260 287 339 7.5E-7 T 23-04-2016 IPR023166 HI0933 insert-like domain RR42_RS14990 bb5935895571f7c0ce36f27f34169ebc 424 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 20 42 4.5E-5 T 23-04-2016 RR42_RS14990 bb5935895571f7c0ce36f27f34169ebc 424 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 380 387 4.5E-5 T 23-04-2016 RR42_RS14990 bb5935895571f7c0ce36f27f34169ebc 424 Gene3D G3DSA:3.50.50.60 18 201 8.7E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS14990 bb5935895571f7c0ce36f27f34169ebc 424 Gene3D G3DSA:3.50.50.60 357 414 8.7E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS14990 bb5935895571f7c0ce36f27f34169ebc 424 Gene3D G3DSA:2.40.30.10 203 286 2.7E-24 T 23-04-2016 RR42_RS14990 bb5935895571f7c0ce36f27f34169ebc 424 PANTHER PTHR10617:SF103 6 303 2.5E-106 T 23-04-2016 RR42_RS14990 bb5935895571f7c0ce36f27f34169ebc 424 PANTHER PTHR10617:SF103 348 417 2.5E-106 T 23-04-2016 RR42_RS14990 bb5935895571f7c0ce36f27f34169ebc 424 SUPERFAMILY SSF51905 19 203 6.35E-53 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS14990 bb5935895571f7c0ce36f27f34169ebc 424 SUPERFAMILY SSF51905 355 414 6.35E-53 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS14990 bb5935895571f7c0ce36f27f34169ebc 424 SUPERFAMILY SSF160996 204 358 2.35E-38 T 23-04-2016 RR42_RS00490 9e87291947ce3d4415fc2ccdf053ca4c 205 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 16 203 34.902 T 23-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RR42_RS00490 9e87291947ce3d4415fc2ccdf053ca4c 205 PANTHER PTHR30042 13 204 1.5E-89 T 23-04-2016 RR42_RS00490 9e87291947ce3d4415fc2ccdf053ca4c 205 PIRSF PIRSF001296 15 205 7.2E-73 T 23-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RR42_RS00490 9e87291947ce3d4415fc2ccdf053ca4c 205 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 19 202 5.8E-69 T 23-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RR42_RS00490 9e87291947ce3d4415fc2ccdf053ca4c 205 PANTHER PTHR30042:SF2 13 204 1.5E-89 T 23-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RR42_RS00490 9e87291947ce3d4415fc2ccdf053ca4c 205 Pfam PF02669 K+-transporting ATPase, c chain 20 201 1.3E-71 T 23-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RR42_RS19535 c43b0b27a6b33b64b62b2cb7e7944926 633 PANTHER PTHR35811:SF1 6 536 6.8E-60 T 23-04-2016 RR42_RS19535 c43b0b27a6b33b64b62b2cb7e7944926 633 PANTHER PTHR35811 6 536 6.8E-60 T 23-04-2016 RR42_RS19535 c43b0b27a6b33b64b62b2cb7e7944926 633 Pfam PF12872 OST-HTH/LOTUS domain 177 245 6.4E-16 T 23-04-2016 IPR025605 OST-HTH/LOTUS domain RR42_RS19535 c43b0b27a6b33b64b62b2cb7e7944926 633 Pfam PF01936 NYN domain 12 144 1.5E-29 T 23-04-2016 IPR021139 NYN domain, limkain-b1-type RR42_RS19535 c43b0b27a6b33b64b62b2cb7e7944926 633 Gene3D G3DSA:3.40.50.1010 6 146 1.1E-28 T 23-04-2016 IPR029060 PIN domain-like RR42_RS20420 716c61b5443b5d3fe6970a8782fca99d 577 Pfam PF02264 LamB porin 242 573 1.7E-30 T 23-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 RR42_RS20420 716c61b5443b5d3fe6970a8782fca99d 577 Gene3D G3DSA:2.40.170.10 240 577 5.3E-36 T 23-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 RR42_RS20420 716c61b5443b5d3fe6970a8782fca99d 577 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 243 543 1.0E-28 T 23-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 RR42_RS20420 716c61b5443b5d3fe6970a8782fca99d 577 SUPERFAMILY SSF56935 240 577 1.79E-50 T 23-04-2016 RR42_RS15550 4189a0fd75477d64fe1ce7ad82669eda 190 SUPERFAMILY SSF54523 18 154 4.32E-14 T 23-04-2016 RR42_RS15550 4189a0fd75477d64fe1ce7ad82669eda 190 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 18 36 8.5E-4 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS15550 4189a0fd75477d64fe1ce7ad82669eda 190 Pfam PF12019 Type II transport protein GspH 52 166 1.1E-7 T 23-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RR42_RS15550 4189a0fd75477d64fe1ce7ad82669eda 190 Gene3D G3DSA:3.30.700.10 18 56 4.6E-6 T 23-04-2016 RR42_RS33810 c05564300d4c63d3399f5d5dc6d7c656 101 Pfam PF01541 GIY-YIG catalytic domain 1 65 4.6E-7 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily RR42_RS33810 c05564300d4c63d3399f5d5dc6d7c656 101 SMART SM00465 1 70 3.0E-8 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily RR42_RS33810 c05564300d4c63d3399f5d5dc6d7c656 101 SUPERFAMILY SSF82771 1 72 3.53E-19 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily RR42_RS33810 c05564300d4c63d3399f5d5dc6d7c656 101 Gene3D G3DSA:3.40.1440.10 2 69 3.6E-5 T 23-04-2016 IPR027299 GIY-YIG domain RR42_RS33810 c05564300d4c63d3399f5d5dc6d7c656 101 PANTHER PTHR30562 1 101 1.5E-41 T 23-04-2016 RR42_RS33810 c05564300d4c63d3399f5d5dc6d7c656 101 PANTHER PTHR30562:SF1 1 101 1.5E-41 T 23-04-2016 RR42_RS12160 ffc3c720d7d875c44799486bb0069393 849 Pfam PF13954 PapC N-terminal domain 12 165 1.4E-39 T 23-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 RR42_RS12160 ffc3c720d7d875c44799486bb0069393 849 PANTHER PTHR30451 11 836 0.0 T 23-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RR42_RS12160 ffc3c720d7d875c44799486bb0069393 849 Pfam PF00577 Outer membrane usher protein 180 739 9.9E-152 T 23-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RR42_RS12160 ffc3c720d7d875c44799486bb0069393 849 PANTHER PTHR30451:SF1 11 836 0.0 T 23-04-2016 RR42_RS12160 ffc3c720d7d875c44799486bb0069393 849 Pfam PF13953 PapC C-terminal domain 750 816 4.2E-17 T 23-04-2016 IPR025949 PapC-like, C-terminal domain RR42_RS12160 ffc3c720d7d875c44799486bb0069393 849 SUPERFAMILY SSF141729 11 139 5.62E-27 T 23-04-2016 RR42_RS12160 ffc3c720d7d875c44799486bb0069393 849 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 292 302 - T 23-04-2016 IPR018030 Fimbrial membrane usher, conserved site RR42_RS05530 613fe54433485ed49575c37561263043 168 SUPERFAMILY SSF52833 3 158 3.91E-51 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS05530 613fe54433485ed49575c37561263043 168 Gene3D G3DSA:3.40.30.10 76 156 3.6E-6 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS05530 613fe54433485ed49575c37561263043 168 PIRSF PIRSF000216 1 168 1.2E-56 T 23-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 RR42_RS05530 613fe54433485ed49575c37561263043 168 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 11 157 9.5E-49 T 23-04-2016 RR42_RS05530 613fe54433485ed49575c37561263043 168 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 9 157 6.1E-62 T 23-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 RR42_RS05530 613fe54433485ed49575c37561263043 168 PANTHER PTHR10371 2 158 5.4E-57 T 23-04-2016 RR42_RS12870 ad7eba42d693702d1b1550580dbf1131 254 PANTHER PTHR42208:SF1 1 239 1.1E-16 T 23-04-2016 RR42_RS12870 ad7eba42d693702d1b1550580dbf1131 254 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 9 232 3.0E-45 T 23-04-2016 RR42_RS12870 ad7eba42d693702d1b1550580dbf1131 254 PANTHER PTHR42208 1 239 1.1E-16 T 23-04-2016 RR42_RS09740 3920507b389a3ce59a488775deee7f13 328 Gene3D G3DSA:2.40.50.100 183 214 1.2E-7 T 23-04-2016 RR42_RS09740 3920507b389a3ce59a488775deee7f13 328 Gene3D G3DSA:2.40.50.100 49 80 1.2E-7 T 23-04-2016 RR42_RS09740 3920507b389a3ce59a488775deee7f13 328 Pfam PF13437 HlyD family secretion protein 185 268 1.3E-10 T 23-04-2016 RR42_RS09740 3920507b389a3ce59a488775deee7f13 328 SUPERFAMILY SSF111369 49 235 6.15E-7 T 23-04-2016 RR42_RS09740 3920507b389a3ce59a488775deee7f13 328 PANTHER PTHR30438 1 327 9.4E-49 T 23-04-2016 RR42_RS09740 3920507b389a3ce59a488775deee7f13 328 PANTHER PTHR30438:SF1 1 327 9.4E-49 T 23-04-2016 RR42_RS26465 0741405ebc67040c29468f5c38b4f715 534 Pfam PF13116 Protein of unknown function 149 447 6.6E-48 T 23-04-2016 IPR025263 Domain of unknown function DUF3971 RR42_RS26465 0741405ebc67040c29468f5c38b4f715 534 PANTHER PTHR38690 44 219 1.2E-34 T 23-04-2016 RR42_RS26465 0741405ebc67040c29468f5c38b4f715 534 PANTHER PTHR38690 237 518 1.2E-34 T 23-04-2016 RR42_RS20145 2a4a4ced4cd6588697f2bcd5118f5d09 140 PANTHER PTHR33303 1 137 1.7E-39 T 23-04-2016 RR42_RS20145 2a4a4ced4cd6588697f2bcd5118f5d09 140 SUPERFAMILY SSF51735 3 137 3.09E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS20145 2a4a4ced4cd6588697f2bcd5118f5d09 140 Gene3D G3DSA:3.40.50.720 4 138 4.3E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS20145 2a4a4ced4cd6588697f2bcd5118f5d09 140 SMART SM00881 8 109 2.7E-20 T 23-04-2016 IPR003781 CoA-binding GO:0048037 RR42_RS20145 2a4a4ced4cd6588697f2bcd5118f5d09 140 Pfam PF13380 CoA binding domain 12 135 3.4E-37 T 23-04-2016 IPR003781 CoA-binding GO:0048037 RR42_RS00790 bf39703ab26ddaf96b89efc09f45102d 135 Pfam PF00072 Response regulator receiver domain 15 126 9.7E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS00790 bf39703ab26ddaf96b89efc09f45102d 135 Gene3D G3DSA:3.40.50.2300 10 133 1.5E-23 T 23-04-2016 RR42_RS00790 bf39703ab26ddaf96b89efc09f45102d 135 SMART SM00448 13 127 1.0E-16 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS00790 bf39703ab26ddaf96b89efc09f45102d 135 SUPERFAMILY SSF52172 9 132 6.12E-22 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS00790 bf39703ab26ddaf96b89efc09f45102d 135 PANTHER PTHR26402 13 132 1.2E-23 T 23-04-2016 RR42_RS25015 eefcf8367c6d0aaacdd7ebf6447910c4 294 PANTHER PTHR11662 45 294 1.8E-106 T 23-04-2016 RR42_RS25015 eefcf8367c6d0aaacdd7ebf6447910c4 294 PANTHER PTHR11662:SF3 45 294 1.8E-106 T 23-04-2016 RR42_RS25015 eefcf8367c6d0aaacdd7ebf6447910c4 294 Gene3D G3DSA:1.20.1250.20 49 252 6.7E-45 T 23-04-2016 RR42_RS25015 eefcf8367c6d0aaacdd7ebf6447910c4 294 Pfam PF07690 Major Facilitator Superfamily 60 292 1.8E-33 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS25015 eefcf8367c6d0aaacdd7ebf6447910c4 294 SUPERFAMILY SSF103473 39 293 3.66E-56 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS08785 36a0872d8222fbbbf959ae81ead6c53b 150 PANTHER PTHR10094 82 133 1.1E-12 T 23-04-2016 RR42_RS08785 36a0872d8222fbbbf959ae81ead6c53b 150 Gene3D G3DSA:3.30.1050.10 46 127 1.7E-9 T 23-04-2016 IPR003033 SCP2 sterol-binding domain RR42_RS08785 36a0872d8222fbbbf959ae81ead6c53b 150 SUPERFAMILY SSF55718 16 129 2.33E-19 T 23-04-2016 IPR003033 SCP2 sterol-binding domain RR42_RS08785 36a0872d8222fbbbf959ae81ead6c53b 150 PANTHER PTHR10094:SF16 82 133 1.1E-12 T 23-04-2016 RR42_RS08785 36a0872d8222fbbbf959ae81ead6c53b 150 Pfam PF02036 SCP-2 sterol transfer family 42 121 7.4E-11 T 23-04-2016 IPR003033 SCP2 sterol-binding domain RR42_RS13415 e870216f39d6635d05c7d65ca8e0ae6f 73 PANTHER PTHR33370 2 72 1.2E-34 T 23-04-2016 RR42_RS13415 e870216f39d6635d05c7d65ca8e0ae6f 73 Gene3D G3DSA:2.40.50.140 2 72 2.3E-33 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS13415 e870216f39d6635d05c7d65ca8e0ae6f 73 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 3.4E-30 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RR42_RS13415 e870216f39d6635d05c7d65ca8e0ae6f 73 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 24.864 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RR42_RS13415 e870216f39d6635d05c7d65ca8e0ae6f 73 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 2.5E-23 T 23-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 RR42_RS13415 e870216f39d6635d05c7d65ca8e0ae6f 73 SUPERFAMILY SSF50249 1 71 2.0E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS05345 91d304fb785a82bee916d6fd1c2954f7 314 SUPERFAMILY SSF53850 91 300 3.72E-44 T 23-04-2016 RR42_RS05345 91d304fb785a82bee916d6fd1c2954f7 314 Gene3D G3DSA:3.40.190.10 175 272 3.8E-27 T 23-04-2016 RR42_RS05345 91d304fb785a82bee916d6fd1c2954f7 314 Pfam PF03466 LysR substrate binding domain 97 300 6.6E-23 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS05345 91d304fb785a82bee916d6fd1c2954f7 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 1.1E-13 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS05345 91d304fb785a82bee916d6fd1c2954f7 314 Gene3D G3DSA:3.40.190.10 276 304 2.0E-30 T 23-04-2016 RR42_RS05345 91d304fb785a82bee916d6fd1c2954f7 314 Gene3D G3DSA:3.40.190.10 91 174 2.0E-30 T 23-04-2016 RR42_RS05345 91d304fb785a82bee916d6fd1c2954f7 314 Gene3D G3DSA:1.10.10.10 4 87 3.2E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS05345 91d304fb785a82bee916d6fd1c2954f7 314 PANTHER PTHR30118:SF8 1 310 6.9E-77 T 23-04-2016 RR42_RS05345 91d304fb785a82bee916d6fd1c2954f7 314 PANTHER PTHR30118 1 310 6.9E-77 T 23-04-2016 RR42_RS05345 91d304fb785a82bee916d6fd1c2954f7 314 SUPERFAMILY SSF46785 6 85 1.16E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS15795 c5a6d326f0fcc563216ae7c05ef8bbb4 256 PANTHER PTHR21485 1 183 3.6E-26 T 23-04-2016 RR42_RS15795 c5a6d326f0fcc563216ae7c05ef8bbb4 256 Pfam PF02348 Cytidylyltransferase 4 174 1.4E-31 T 23-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RR42_RS15795 c5a6d326f0fcc563216ae7c05ef8bbb4 256 Gene3D G3DSA:3.90.550.10 1 204 2.5E-36 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RR42_RS15795 c5a6d326f0fcc563216ae7c05ef8bbb4 256 PANTHER PTHR21485:SF16 1 183 3.6E-26 T 23-04-2016 RR42_RS15795 c5a6d326f0fcc563216ae7c05ef8bbb4 256 SUPERFAMILY SSF53448 1 208 1.66E-30 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RR42_RS00025 810d38b503ebb67ff7ca875157d4e709 914 SUPERFAMILY SSF52540 562 740 6.01E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS00025 810d38b503ebb67ff7ca875157d4e709 914 Gene3D G3DSA:3.40.50.300 565 738 3.5E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS00025 810d38b503ebb67ff7ca875157d4e709 914 SMART SM00382 571 753 6.9E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS00025 810d38b503ebb67ff7ca875157d4e709 914 Pfam PF12102 Domain of unknown function (DUF3578) 387 437 9.6E-7 T 23-04-2016 IPR021961 Protein of unknown function DUF3578 RR42_RS15715 ce4c02a702f518038ea749b1495c713a 358 PANTHER PTHR12526:SF374 9 358 6.3E-57 T 23-04-2016 RR42_RS15715 ce4c02a702f518038ea749b1495c713a 358 Pfam PF00534 Glycosyl transferases group 1 185 339 1.1E-40 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 RR42_RS15715 ce4c02a702f518038ea749b1495c713a 358 SUPERFAMILY SSF53756 8 357 3.38E-72 T 23-04-2016 RR42_RS15715 ce4c02a702f518038ea749b1495c713a 358 Gene3D G3DSA:3.40.50.2000 186 338 1.1E-28 T 23-04-2016 RR42_RS15715 ce4c02a702f518038ea749b1495c713a 358 Pfam PF13439 Glycosyltransferase Family 4 19 171 4.2E-11 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RR42_RS15715 ce4c02a702f518038ea749b1495c713a 358 PANTHER PTHR12526 9 358 6.3E-57 T 23-04-2016 RR42_RS11975 87963ed011b7e181fbf0864cf846d175 351 PANTHER PTHR36512 10 345 2.2E-72 T 23-04-2016 RR42_RS11975 87963ed011b7e181fbf0864cf846d175 351 PANTHER PTHR36512:SF1 10 345 2.2E-72 T 23-04-2016 RR42_RS11975 87963ed011b7e181fbf0864cf846d175 351 SUPERFAMILY SSF56266 6 343 3.66E-102 T 23-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RR42_RS11975 87963ed011b7e181fbf0864cf846d175 351 Pfam PF03576 Peptidase family S58 13 329 1.3E-110 T 23-04-2016 IPR005321 Peptidase S58, DmpA RR42_RS11975 87963ed011b7e181fbf0864cf846d175 351 Gene3D G3DSA:3.60.70.12 4 335 5.6E-129 T 23-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RR42_RS17215 556187f234a446655ca7231c102e4f67 167 Gene3D G3DSA:3.40.630.30 3 163 6.3E-58 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS17215 556187f234a446655ca7231c102e4f67 167 SUPERFAMILY SSF55729 5 154 5.06E-36 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS17215 556187f234a446655ca7231c102e4f67 167 PANTHER PTHR10545 5 167 7.4E-72 T 23-04-2016 RR42_RS17215 556187f234a446655ca7231c102e4f67 167 Pfam PF00583 Acetyltransferase (GNAT) family 68 143 1.1E-17 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RR42_RS13925 06fa1764db7cc505eef343110ae04aa8 245 PANTHER PTHR30625 22 242 1.8E-43 T 23-04-2016 RR42_RS13925 06fa1764db7cc505eef343110ae04aa8 245 PANTHER PTHR30625:SF3 22 242 1.8E-43 T 23-04-2016 RR42_RS13925 06fa1764db7cc505eef343110ae04aa8 245 Pfam PF01618 MotA/TolQ/ExbB proton channel family 97 206 3.2E-36 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RR42_RS04390 9ce27e74d2e9582a89dbd4660ffc605f 306 PANTHER PTHR30085:SF2 10 304 6.5E-114 T 23-04-2016 RR42_RS04390 9ce27e74d2e9582a89dbd4660ffc605f 306 PANTHER PTHR30085 10 304 6.5E-114 T 23-04-2016 RR42_RS04390 9ce27e74d2e9582a89dbd4660ffc605f 306 Gene3D G3DSA:3.40.190.10 43 130 2.1E-24 T 23-04-2016 RR42_RS04390 9ce27e74d2e9582a89dbd4660ffc605f 306 Gene3D G3DSA:3.40.190.10 238 279 2.1E-24 T 23-04-2016 RR42_RS04390 9ce27e74d2e9582a89dbd4660ffc605f 306 SUPERFAMILY SSF53850 19 278 1.66E-57 T 23-04-2016 RR42_RS04390 9ce27e74d2e9582a89dbd4660ffc605f 306 SMART SM00062 46 277 1.3E-49 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RR42_RS04390 9ce27e74d2e9582a89dbd4660ffc605f 306 Gene3D G3DSA:3.40.190.10 131 237 4.5E-28 T 23-04-2016 RR42_RS04390 9ce27e74d2e9582a89dbd4660ffc605f 306 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 275 5.5E-42 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RR42_RS16540 6f273b3e2fc2c2f0a71a0f5853b155f9 729 SUPERFAMILY SSF56601 296 346 2.82E-109 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS16540 6f273b3e2fc2c2f0a71a0f5853b155f9 729 SUPERFAMILY SSF56601 244 266 2.82E-109 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS16540 6f273b3e2fc2c2f0a71a0f5853b155f9 729 SUPERFAMILY SSF56601 409 699 2.82E-109 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS16540 6f273b3e2fc2c2f0a71a0f5853b155f9 729 Pfam PF00912 Transglycosylase 87 262 1.9E-61 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 RR42_RS16540 6f273b3e2fc2c2f0a71a0f5853b155f9 729 Pfam PF00905 Penicillin binding protein transpeptidase domain 415 652 1.4E-31 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RR42_RS16540 6f273b3e2fc2c2f0a71a0f5853b155f9 729 PANTHER PTHR32282:SF5 11 347 2.4E-171 T 23-04-2016 RR42_RS16540 6f273b3e2fc2c2f0a71a0f5853b155f9 729 PANTHER PTHR32282:SF5 408 709 2.4E-171 T 23-04-2016 RR42_RS16540 6f273b3e2fc2c2f0a71a0f5853b155f9 729 SUPERFAMILY SSF53955 76 286 1.97E-69 T 23-04-2016 IPR023346 Lysozyme-like domain RR42_RS16540 6f273b3e2fc2c2f0a71a0f5853b155f9 729 Gene3D G3DSA:3.40.710.10 265 350 5.5E-109 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS16540 6f273b3e2fc2c2f0a71a0f5853b155f9 729 Gene3D G3DSA:3.40.710.10 407 699 5.5E-109 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS16540 6f273b3e2fc2c2f0a71a0f5853b155f9 729 PANTHER PTHR32282 11 347 2.4E-171 T 23-04-2016 RR42_RS16540 6f273b3e2fc2c2f0a71a0f5853b155f9 729 PANTHER PTHR32282 408 709 2.4E-171 T 23-04-2016 RR42_RS16540 6f273b3e2fc2c2f0a71a0f5853b155f9 729 Gene3D G3DSA:1.10.3810.10 88 264 2.4E-68 T 23-04-2016 RR42_RS12970 f871499bc7822f564c3163688c0f8a64 438 Gene3D G3DSA:3.40.190.10 147 356 1.9E-41 T 23-04-2016 RR42_RS12970 f871499bc7822f564c3163688c0f8a64 438 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 141 158 - T 23-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 RR42_RS12970 f871499bc7822f564c3163688c0f8a64 438 Pfam PF13416 Bacterial extracellular solute-binding protein 45 368 2.1E-42 T 23-04-2016 RR42_RS12970 f871499bc7822f564c3163688c0f8a64 438 PANTHER PTHR30061 5 434 7.8E-155 T 23-04-2016 RR42_RS12970 f871499bc7822f564c3163688c0f8a64 438 PANTHER PTHR30061:SF7 5 434 7.8E-155 T 23-04-2016 RR42_RS12970 f871499bc7822f564c3163688c0f8a64 438 SUPERFAMILY SSF53850 26 424 1.98E-73 T 23-04-2016 RR42_RS06695 12705924a6cf428aa5c158fffd28fc87 368 Gene3D G3DSA:4.10.860.10 276 307 1.5E-4 T 23-04-2016 IPR001943 UVR domain GO:0005515 RR42_RS06695 12705924a6cf428aa5c158fffd28fc87 368 Pfam PF02151 UvrB/uvrC motif 279 306 1.1E-6 T 23-04-2016 IPR001943 UVR domain GO:0005515 RR42_RS06695 12705924a6cf428aa5c158fffd28fc87 368 SUPERFAMILY SSF46600 273 307 2.35E-5 T 23-04-2016 IPR001943 UVR domain GO:0005515 RR42_RS05250 458ee4f2192acaa9b03f8efddd8db097 172 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 15 169 1.2E-60 T 23-04-2016 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 RR42_RS05250 458ee4f2192acaa9b03f8efddd8db097 172 Pfam PF09349 OHCU decarboxylase 11 167 7.5E-47 T 23-04-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 RR42_RS05250 458ee4f2192acaa9b03f8efddd8db097 172 Gene3D G3DSA:1.10.3330.10 12 171 3.7E-60 T 23-04-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 RR42_RS05250 458ee4f2192acaa9b03f8efddd8db097 172 SUPERFAMILY SSF158694 6 170 1.1E-54 T 23-04-2016 RR42_RS05585 4b198139cebc95631af9058b2069bd44 207 Gene3D G3DSA:3.90.79.10 26 192 1.9E-51 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RR42_RS05585 4b198139cebc95631af9058b2069bd44 207 PANTHER PTHR11839:SF9 31 190 9.5E-49 T 23-04-2016 RR42_RS05585 4b198139cebc95631af9058b2069bd44 207 SUPERFAMILY SSF55811 26 191 5.96E-46 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RR42_RS05585 4b198139cebc95631af9058b2069bd44 207 Pfam PF00293 NUDIX domain 60 169 3.7E-15 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RR42_RS05585 4b198139cebc95631af9058b2069bd44 207 PANTHER PTHR11839 31 190 9.5E-49 T 23-04-2016 RR42_RS03145 6b28656ddf3f2a4aa2985d6591516809 570 PANTHER PTHR22726:SF10 89 409 1.5E-71 T 23-04-2016 RR42_RS03145 6b28656ddf3f2a4aa2985d6591516809 570 PANTHER PTHR22726 89 409 1.5E-71 T 23-04-2016 RR42_RS03145 6b28656ddf3f2a4aa2985d6591516809 570 SUPERFAMILY SSF48452 378 506 1.49E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS03145 6b28656ddf3f2a4aa2985d6591516809 570 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 12 562 31.548 T 23-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 RR42_RS03145 6b28656ddf3f2a4aa2985d6591516809 570 Gene3D G3DSA:3.30.2010.10 125 219 1.0E-18 T 23-04-2016 RR42_RS03145 6b28656ddf3f2a4aa2985d6591516809 570 Pfam PF01435 Peptidase family M48 162 328 4.8E-31 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RR42_RS03145 6b28656ddf3f2a4aa2985d6591516809 570 Gene3D G3DSA:1.25.40.10 366 536 1.0E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS15700 3c39b2e371f7516d18d6337ad84fa4b9 438 PANTHER PTHR30576 246 437 5.7E-77 T 23-04-2016 RR42_RS15700 3c39b2e371f7516d18d6337ad84fa4b9 438 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 35 438 6.2E-90 T 23-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase RR42_RS15700 3c39b2e371f7516d18d6337ad84fa4b9 438 PANTHER PTHR30576:SF0 246 437 5.7E-77 T 23-04-2016 RR42_RS15700 3c39b2e371f7516d18d6337ad84fa4b9 438 Pfam PF02397 Bacterial sugar transferase 251 432 3.9E-52 T 23-04-2016 IPR003362 Bacterial sugar transferase RR42_RS20575 628430a98a27ab882bdf579e7bdbafd7 106 Pfam PF09919 Uncharacterized conserved protein (DUF2149) 14 101 3.5E-27 T 23-04-2016 IPR018676 Protein of unknown function DUF2149 RR42_RS26485 16074f5f746d3610ea0bfa36e1cdf41f 348 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 165 348 5.0E-44 T 23-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 RR42_RS26485 16074f5f746d3610ea0bfa36e1cdf41f 348 PANTHER PTHR30621 1 348 2.8E-68 T 23-04-2016 RR42_RS26485 16074f5f746d3610ea0bfa36e1cdf41f 348 Gene3D G3DSA:3.30.460.10 249 348 1.5E-28 T 23-04-2016 RR42_RS26485 16074f5f746d3610ea0bfa36e1cdf41f 348 Pfam PF08335 GlnD PII-uridylyltransferase 2 50 2.4E-8 T 23-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RR42_RS26485 16074f5f746d3610ea0bfa36e1cdf41f 348 SUPERFAMILY SSF81301 137 348 2.07E-52 T 23-04-2016 RR42_RS02070 344f273fc910de8ef8d9cbc875831b88 323 PANTHER PTHR30305:SF1 1 317 2.3E-87 T 23-04-2016 RR42_RS02070 344f273fc910de8ef8d9cbc875831b88 323 Gene3D G3DSA:3.40.50.300 141 312 1.1E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02070 344f273fc910de8ef8d9cbc875831b88 323 SUPERFAMILY SSF53795 140 306 7.94E-34 T 23-04-2016 RR42_RS02070 344f273fc910de8ef8d9cbc875831b88 323 Pfam PF02603 HPr Serine kinase N terminus 8 135 9.1E-24 T 23-04-2016 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 RR42_RS02070 344f273fc910de8ef8d9cbc875831b88 323 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 13 309 7.1E-95 T 23-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 RR42_RS02070 344f273fc910de8ef8d9cbc875831b88 323 Gene3D G3DSA:3.40.1390.20 12 137 1.1E-33 T 23-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like RR42_RS02070 344f273fc910de8ef8d9cbc875831b88 323 SUPERFAMILY SSF75138 12 137 1.83E-29 T 23-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like RR42_RS02070 344f273fc910de8ef8d9cbc875831b88 323 Pfam PF07475 HPr Serine kinase C-terminal domain 140 305 5.1E-60 T 23-04-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 RR42_RS02070 344f273fc910de8ef8d9cbc875831b88 323 PANTHER PTHR30305 1 317 2.3E-87 T 23-04-2016 RR42_RS02070 344f273fc910de8ef8d9cbc875831b88 323 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 5 313 37.051 T 23-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 RR42_RS14930 b9101c443a2a70681adef1e23e08015c 136 PANTHER PTHR30558 12 135 4.7E-41 T 23-04-2016 RR42_RS14930 b9101c443a2a70681adef1e23e08015c 136 PANTHER PTHR30558:SF10 12 135 4.7E-41 T 23-04-2016 RR42_RS14930 b9101c443a2a70681adef1e23e08015c 136 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 133 3.1E-28 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RR42_RS09315 dfd5a97d2b000d6c61aa5d4c57937098 331 PANTHER PTHR30349:SF16 8 296 6.5E-108 T 23-04-2016 RR42_RS09315 dfd5a97d2b000d6c61aa5d4c57937098 331 PANTHER PTHR30349 8 296 6.5E-108 T 23-04-2016 RR42_RS09315 dfd5a97d2b000d6c61aa5d4c57937098 331 SUPERFAMILY SSF53850 118 293 1.04E-13 T 23-04-2016 RR42_RS09315 dfd5a97d2b000d6c61aa5d4c57937098 331 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 55 327 3.3E-97 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS09315 dfd5a97d2b000d6c61aa5d4c57937098 331 PIRSF PIRSF017082 1 331 1.7E-83 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS10025 88aa23035d2f168252e987713582fe03 91 PIRSF PIRSF001486 1 91 3.3E-46 T 23-04-2016 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 RR42_RS10025 88aa23035d2f168252e987713582fe03 91 Pfam PF02426 Muconolactone delta-isomerase 1 89 1.5E-41 T 23-04-2016 IPR026029 Muconolactone isomerase domain KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 RR42_RS10025 88aa23035d2f168252e987713582fe03 91 TIGRFAM TIGR03221 muco_delta: muconolactone delta-isomerase 2 91 4.7E-47 T 23-04-2016 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 RR42_RS10025 88aa23035d2f168252e987713582fe03 91 ProDom PD006619 ISOMERASE MUCONOLACTONE DELTA-ISOMERASE HYDROCARBONS MIASE AROMATIC CATABOLISM METHYLMUCONOLACTONE DIRECT SEQUENCING 1 57 8.0E-13 T 23-04-2016 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 RR42_RS10025 88aa23035d2f168252e987713582fe03 91 SUPERFAMILY SSF54909 1 91 3.75E-38 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RR42_RS17540 08bcf812ab701fa58985aca9f9f3feb2 173 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 14 172 25.681 T 23-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 RR42_RS17540 08bcf812ab701fa58985aca9f9f3feb2 173 Pfam PF04390 Lipopolysaccharide-assembly 20 167 7.7E-24 T 23-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 RR42_RS17540 08bcf812ab701fa58985aca9f9f3feb2 173 Gene3D G3DSA:3.30.160.150 29 172 1.2E-46 T 23-04-2016 RR42_RS17540 08bcf812ab701fa58985aca9f9f3feb2 173 PANTHER PTHR38098:SF1 13 172 8.3E-19 T 23-04-2016 RR42_RS17540 08bcf812ab701fa58985aca9f9f3feb2 173 PANTHER PTHR38098 13 172 8.3E-19 T 23-04-2016 RR42_RS05140 45c96531120323f9e8c16883e044fcbf 325 PANTHER PTHR23024 72 207 1.9E-29 T 23-04-2016 RR42_RS05140 45c96531120323f9e8c16883e044fcbf 325 Gene3D G3DSA:3.40.50.1820 64 317 5.6E-43 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS05140 45c96531120323f9e8c16883e044fcbf 325 Pfam PF07859 alpha/beta hydrolase fold 97 276 1.7E-18 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RR42_RS05140 45c96531120323f9e8c16883e044fcbf 325 SUPERFAMILY SSF53474 70 294 6.15E-42 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS00690 0f91821f257b50be96ede58a57d0da1a 373 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 121 368 2.0E-67 T 23-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria RR42_RS00690 0f91821f257b50be96ede58a57d0da1a 373 PANTHER PTHR30188 35 372 3.1E-85 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 RR42_RS00690 0f91821f257b50be96ede58a57d0da1a 373 PANTHER PTHR30188:SF3 35 372 3.1E-85 T 23-04-2016 RR42_RS00690 0f91821f257b50be96ede58a57d0da1a 373 Pfam PF02405 Permease MlaE 158 366 3.6E-68 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 RR42_RS15295 0a0902600b2e23a59b8b079299487967 149 SUPERFAMILY SSF47188 14 130 8.37E-24 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 RR42_RS15295 0a0902600b2e23a59b8b079299487967 149 PANTHER PTHR37164 8 145 4.0E-13 T 23-04-2016 RR42_RS15295 0a0902600b2e23a59b8b079299487967 149 ProSitePatterns PS00550 Hemerythrin family signature. 59 82 - T 23-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 RR42_RS15295 0a0902600b2e23a59b8b079299487967 149 Pfam PF01814 Hemerythrin HHE cation binding domain 25 126 7.8E-8 T 23-04-2016 IPR012312 Haemerythrin-like RR42_RS15295 0a0902600b2e23a59b8b079299487967 149 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 15 129 1.2E-16 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 RR42_RS15295 0a0902600b2e23a59b8b079299487967 149 Gene3D G3DSA:1.20.120.50 14 129 1.4E-18 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 RR42_RS06180 61156b1ed44a69762ff220afc8fdef34 112 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 33.902 T 23-04-2016 IPR023081 Cell division protein FtsB RR42_RS06180 61156b1ed44a69762ff220afc8fdef34 112 PANTHER PTHR37485:SF1 2 106 1.5E-34 T 23-04-2016 RR42_RS06180 61156b1ed44a69762ff220afc8fdef34 112 PANTHER PTHR37485 2 106 1.5E-34 T 23-04-2016 RR42_RS06180 61156b1ed44a69762ff220afc8fdef34 112 Pfam PF04977 Septum formation initiator 11 89 1.2E-26 T 23-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 RR42_RS00855 4bad3dc47d83ed5a09caa47f64ab31ee 357 PANTHER PTHR11935 24 126 3.8E-36 T 23-04-2016 RR42_RS00855 4bad3dc47d83ed5a09caa47f64ab31ee 357 PANTHER PTHR11935 157 327 3.8E-36 T 23-04-2016 RR42_RS00855 4bad3dc47d83ed5a09caa47f64ab31ee 357 SMART SM00849 42 270 4.7E-19 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS00855 4bad3dc47d83ed5a09caa47f64ab31ee 357 SUPERFAMILY SSF56281 17 356 2.36E-61 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS00855 4bad3dc47d83ed5a09caa47f64ab31ee 357 Gene3D G3DSA:3.60.15.10 171 300 5.2E-48 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS00855 4bad3dc47d83ed5a09caa47f64ab31ee 357 Gene3D G3DSA:3.60.15.10 16 127 5.2E-48 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS00855 4bad3dc47d83ed5a09caa47f64ab31ee 357 PANTHER PTHR11935:SF109 24 126 3.8E-36 T 23-04-2016 RR42_RS00855 4bad3dc47d83ed5a09caa47f64ab31ee 357 PANTHER PTHR11935:SF109 157 327 3.8E-36 T 23-04-2016 RR42_RS00855 4bad3dc47d83ed5a09caa47f64ab31ee 357 Pfam PF00753 Metallo-beta-lactamase superfamily 41 270 4.8E-23 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS09940 4be3e7f263afe375cc9ace197015bff3 313 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 35 297 1.4E-47 T 23-04-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region RR42_RS09940 4be3e7f263afe375cc9ace197015bff3 313 Gene3D G3DSA:2.120.10.30 20 310 2.5E-65 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like RR42_RS09940 4be3e7f263afe375cc9ace197015bff3 313 PANTHER PTHR10907:SF47 12 311 2.2E-88 T 23-04-2016 RR42_RS09940 4be3e7f263afe375cc9ace197015bff3 313 PANTHER PTHR10907 12 311 2.2E-88 T 23-04-2016 RR42_RS09940 4be3e7f263afe375cc9ace197015bff3 313 SUPERFAMILY SSF63829 9 305 4.58E-57 T 23-04-2016 RR42_RS09940 4be3e7f263afe375cc9ace197015bff3 313 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 36 53 4.2E-7 T 23-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) RR42_RS09940 4be3e7f263afe375cc9ace197015bff3 313 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 236 253 4.2E-7 T 23-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) RR42_RS09940 4be3e7f263afe375cc9ace197015bff3 313 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 165 187 4.2E-7 T 23-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) RR42_RS11980 8a0e8f334f970b7757085750f1afd4c0 305 PANTHER PTHR30465:SF57 19 304 3.2E-194 T 23-04-2016 RR42_RS11980 8a0e8f334f970b7757085750f1afd4c0 305 PANTHER PTHR30465 19 304 3.2E-194 T 23-04-2016 RR42_RS11980 8a0e8f334f970b7757085750f1afd4c0 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 303 1.5E-31 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS11980 8a0e8f334f970b7757085750f1afd4c0 305 Gene3D G3DSA:1.10.3720.10 93 300 7.4E-31 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS11980 8a0e8f334f970b7757085750f1afd4c0 305 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 26 79 2.6E-12 T 23-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RR42_RS11980 8a0e8f334f970b7757085750f1afd4c0 305 SUPERFAMILY SSF161098 97 287 1.2E-30 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS06675 9b4036898d50e02209f57edc547cabb7 203 Pfam PF07603 Protein of unknown function (DUF1566) 116 199 8.4E-9 T 23-04-2016 IPR011460 Protein of unknown function DUF1566 RR42_RS11405 144dab9d21b43fa33201c45d113ee363 168 PANTHER PTHR36922:SF1 1 166 1.2E-73 T 23-04-2016 RR42_RS11405 144dab9d21b43fa33201c45d113ee363 168 Pfam PF09351 Domain of unknown function (DUF1993) 5 165 8.1E-62 T 23-04-2016 IPR018531 Domain of unknown function DUF1993 RR42_RS11405 144dab9d21b43fa33201c45d113ee363 168 Gene3D G3DSA:1.20.120.450 1 166 1.6E-71 T 23-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase RR42_RS11405 144dab9d21b43fa33201c45d113ee363 168 PANTHER PTHR36922 1 166 1.2E-73 T 23-04-2016 RR42_RS11405 144dab9d21b43fa33201c45d113ee363 168 SUPERFAMILY SSF109854 4 166 2.84E-61 T 23-04-2016 RR42_RS19465 0ac519ba95be243a97f534be4448ba08 163 Gene3D G3DSA:3.30.70.920 59 148 2.9E-31 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RR42_RS19465 0ac519ba95be243a97f534be4448ba08 163 PANTHER PTHR30154:SF23 1 160 6.0E-55 T 23-04-2016 RR42_RS19465 0ac519ba95be243a97f534be4448ba08 163 SUPERFAMILY SSF46785 5 65 1.47E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19465 0ac519ba95be243a97f534be4448ba08 163 SUPERFAMILY SSF54909 66 160 9.79E-20 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RR42_RS19465 0ac519ba95be243a97f534be4448ba08 163 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 1.7E-20 T 23-04-2016 RR42_RS19465 0ac519ba95be243a97f534be4448ba08 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 7.3E-18 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS19465 0ac519ba95be243a97f534be4448ba08 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 7.3E-18 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS19465 0ac519ba95be243a97f534be4448ba08 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 7.3E-18 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS19465 0ac519ba95be243a97f534be4448ba08 163 Pfam PF01037 Lrp/AsnC ligand binding domain 72 150 2.6E-22 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RR42_RS19465 0ac519ba95be243a97f534be4448ba08 163 SMART SM00344 6 120 9.5E-34 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RR42_RS19465 0ac519ba95be243a97f534be4448ba08 163 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 23-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RR42_RS19465 0ac519ba95be243a97f534be4448ba08 163 Gene3D G3DSA:1.10.10.10 4 57 1.5E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19465 0ac519ba95be243a97f534be4448ba08 163 PANTHER PTHR30154 1 160 6.0E-55 T 23-04-2016 RR42_RS10485 5ba731b4a0b6046ca2442fbaf751308e 231 PANTHER PTHR24423:SF438 188 205 9.1E-14 T 23-04-2016 RR42_RS10485 5ba731b4a0b6046ca2442fbaf751308e 231 PANTHER PTHR24423:SF438 7 112 9.1E-14 T 23-04-2016 RR42_RS10485 5ba731b4a0b6046ca2442fbaf751308e 231 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 9 114 4.1E-17 T 23-04-2016 IPR000014 PAS domain RR42_RS10485 5ba731b4a0b6046ca2442fbaf751308e 231 Gene3D G3DSA:3.30.450.20 8 111 2.2E-22 T 23-04-2016 RR42_RS10485 5ba731b4a0b6046ca2442fbaf751308e 231 Pfam PF08447 PAS fold 28 98 1.6E-12 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 RR42_RS10485 5ba731b4a0b6046ca2442fbaf751308e 231 SMART SM00091 4 70 1.6E-10 T 23-04-2016 IPR000014 PAS domain RR42_RS10485 5ba731b4a0b6046ca2442fbaf751308e 231 SMART SM00862 148 223 0.0053 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS10485 5ba731b4a0b6046ca2442fbaf751308e 231 SUPERFAMILY SSF46894 149 223 7.94E-9 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS10485 5ba731b4a0b6046ca2442fbaf751308e 231 PANTHER PTHR24423 188 205 9.1E-14 T 23-04-2016 RR42_RS10485 5ba731b4a0b6046ca2442fbaf751308e 231 PANTHER PTHR24423 7 112 9.1E-14 T 23-04-2016 RR42_RS10485 5ba731b4a0b6046ca2442fbaf751308e 231 SUPERFAMILY SSF55785 15 117 1.2E-20 T 23-04-2016 IPR000014 PAS domain RR42_RS10485 5ba731b4a0b6046ca2442fbaf751308e 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 222 8.2E-10 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS10485 5ba731b4a0b6046ca2442fbaf751308e 231 Gene3D G3DSA:1.10.10.10 150 224 7.9E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS06020 24ef93d06ffc7f2a62b8781968c33903 184 PANTHER PTHR33221 2 155 1.1E-56 T 23-04-2016 RR42_RS06020 24ef93d06ffc7f2a62b8781968c33903 184 Gene3D G3DSA:1.10.10.10 1 139 2.0E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS06020 24ef93d06ffc7f2a62b8781968c33903 184 SUPERFAMILY SSF46785 2 135 5.09E-35 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS06020 24ef93d06ffc7f2a62b8781968c33903 184 Pfam PF02082 Transcriptional regulator 1 83 6.0E-28 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type RR42_RS06020 24ef93d06ffc7f2a62b8781968c33903 184 PANTHER PTHR33221:SF1 2 155 1.1E-56 T 23-04-2016 RR42_RS06020 24ef93d06ffc7f2a62b8781968c33903 184 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 133 1.8E-43 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type RR42_RS06020 24ef93d06ffc7f2a62b8781968c33903 184 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 137 3.7E-66 T 23-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 RR42_RS25830 451d92c8c95c3cb58c93b63461cd0f76 340 PANTHER PTHR23024 230 339 1.4E-29 T 23-04-2016 RR42_RS25830 451d92c8c95c3cb58c93b63461cd0f76 340 Pfam PF07859 alpha/beta hydrolase fold 255 339 6.2E-18 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RR42_RS25830 451d92c8c95c3cb58c93b63461cd0f76 340 Gene3D G3DSA:3.40.50.1820 222 339 6.3E-35 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS25830 451d92c8c95c3cb58c93b63461cd0f76 340 SUPERFAMILY SSF53474 208 339 6.54E-35 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS04915 5148e13e4f9fa93bb91e493d281bb329 67 PANTHER PTHR34476 2 62 2.7E-16 T 23-04-2016 RR42_RS04915 5148e13e4f9fa93bb91e493d281bb329 67 SUPERFAMILY SSF63562 1 63 7.72E-21 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RR42_RS04915 5148e13e4f9fa93bb91e493d281bb329 67 Gene3D G3DSA:3.90.940.10 1 64 4.6E-12 T 23-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RR42_RS04915 5148e13e4f9fa93bb91e493d281bb329 67 Pfam PF01192 RNA polymerase Rpb6 8 58 1.8E-16 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RR42_RS04915 5148e13e4f9fa93bb91e493d281bb329 67 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 60 16.572 T 23-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RR42_RS04915 5148e13e4f9fa93bb91e493d281bb329 67 SMART SM01409 8 59 6.9E-16 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RR42_RS04915 5148e13e4f9fa93bb91e493d281bb329 67 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 57 5.9E-18 T 23-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RR42_RS17585 28d23cd61e53936149977f8c628c486e 146 SUPERFAMILY SSF54593 8 131 1.1E-25 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS17585 28d23cd61e53936149977f8c628c486e 146 Gene3D G3DSA:3.10.180.10 12 135 3.4E-27 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS17585 28d23cd61e53936149977f8c628c486e 146 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 129 2.1E-12 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RR42_RS17585 28d23cd61e53936149977f8c628c486e 146 PANTHER PTHR34109 12 144 3.2E-21 T 23-04-2016 RR42_RS32255 523be62071e04d02e2e703f52d75ae9b 212 PANTHER PTHR21631 30 212 1.0E-58 T 23-04-2016 RR42_RS32255 523be62071e04d02e2e703f52d75ae9b 212 Gene3D G3DSA:3.20.20.60 38 212 1.6E-66 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS32255 523be62071e04d02e2e703f52d75ae9b 212 Pfam PF00463 Isocitrate lyase family 42 210 4.2E-30 T 23-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 RR42_RS32255 523be62071e04d02e2e703f52d75ae9b 212 SUPERFAMILY SSF51621 35 212 1.35E-63 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS18500 242fa60bbe2537fa8b5ebeb071ca05af 494 SUPERFAMILY SSF53720 7 483 1.23E-122 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RR42_RS18500 242fa60bbe2537fa8b5ebeb071ca05af 494 Pfam PF00171 Aldehyde dehydrogenase family 7 472 3.8E-117 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RR42_RS18500 242fa60bbe2537fa8b5ebeb071ca05af 494 PANTHER PTHR11699 21 493 3.4E-230 T 23-04-2016 RR42_RS18500 242fa60bbe2537fa8b5ebeb071ca05af 494 Gene3D G3DSA:3.40.309.10 262 441 6.7E-45 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RR42_RS18500 242fa60bbe2537fa8b5ebeb071ca05af 494 PANTHER PTHR11699:SF144 21 493 3.4E-230 T 23-04-2016 RR42_RS18500 242fa60bbe2537fa8b5ebeb071ca05af 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RR42_RS18500 242fa60bbe2537fa8b5ebeb071ca05af 494 Gene3D G3DSA:3.40.605.10 16 261 9.4E-70 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RR42_RS14305 50ec24582e0c2ac647bbf52b78745d11 394 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 381 5.0E-40 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RR42_RS14305 50ec24582e0c2ac647bbf52b78745d11 394 Gene3D G3DSA:2.40.50.100 60 92 9.3E-14 T 23-04-2016 RR42_RS14305 50ec24582e0c2ac647bbf52b78745d11 394 Gene3D G3DSA:2.40.50.100 181 210 9.3E-14 T 23-04-2016 RR42_RS14305 50ec24582e0c2ac647bbf52b78745d11 394 SUPERFAMILY SSF111369 48 239 6.93E-20 T 23-04-2016 RR42_RS14305 50ec24582e0c2ac647bbf52b78745d11 394 PANTHER PTHR30572:SF3 13 392 3.8E-87 T 23-04-2016 RR42_RS14305 50ec24582e0c2ac647bbf52b78745d11 394 PANTHER PTHR30572 13 392 3.8E-87 T 23-04-2016 RR42_RS14305 50ec24582e0c2ac647bbf52b78745d11 394 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 53 266 2.2E-15 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RR42_RS10815 8b6ad3729c82518f7d929e08bc79de59 336 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS10815 8b6ad3729c82518f7d929e08bc79de59 336 PANTHER PTHR24220 14 324 5.6E-135 T 23-04-2016 RR42_RS10815 8b6ad3729c82518f7d929e08bc79de59 336 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 306 9.0E-20 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RR42_RS10815 8b6ad3729c82518f7d929e08bc79de59 336 SUPERFAMILY SSF52540 13 261 1.44E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS10815 8b6ad3729c82518f7d929e08bc79de59 336 PANTHER PTHR24220:SF535 14 324 5.6E-135 T 23-04-2016 RR42_RS10815 8b6ad3729c82518f7d929e08bc79de59 336 Gene3D G3DSA:3.40.50.300 12 264 6.1E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS10815 8b6ad3729c82518f7d929e08bc79de59 336 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 324 2.5E-22 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RR42_RS10815 8b6ad3729c82518f7d929e08bc79de59 336 SMART SM00382 41 240 2.3E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS10815 8b6ad3729c82518f7d929e08bc79de59 336 Pfam PF00005 ABC transporter 33 190 3.0E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS10695 0bf77c8d6b9257d744cc32eb18998526 94 ProDom PD006619 ISOMERASE MUCONOLACTONE DELTA-ISOMERASE HYDROCARBONS MIASE AROMATIC CATABOLISM METHYLMUCONOLACTONE DIRECT SEQUENCING 1 57 1.0E-22 T 23-04-2016 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 RR42_RS10695 0bf77c8d6b9257d744cc32eb18998526 94 Pfam PF02426 Muconolactone delta-isomerase 1 89 6.7E-40 T 23-04-2016 IPR026029 Muconolactone isomerase domain KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 RR42_RS10695 0bf77c8d6b9257d744cc32eb18998526 94 TIGRFAM TIGR03221 muco_delta: muconolactone delta-isomerase 2 91 4.6E-45 T 23-04-2016 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 RR42_RS10695 0bf77c8d6b9257d744cc32eb18998526 94 SUPERFAMILY SSF54909 1 91 2.47E-36 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RR42_RS10695 0bf77c8d6b9257d744cc32eb18998526 94 PIRSF PIRSF001486 1 94 1.9E-45 T 23-04-2016 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 RR42_RS19335 aa8bbb73d36aa9104708319a149e2504 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.356 T 23-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 RR42_RS19335 aa8bbb73d36aa9104708319a149e2504 231 Gene3D G3DSA:3.40.50.790 69 159 3.0E-41 T 23-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich RR42_RS19335 aa8bbb73d36aa9104708319a149e2504 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 9.6E-103 T 23-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 RR42_RS19335 aa8bbb73d36aa9104708319a149e2504 231 PANTHER PTHR23105:SF5 21 229 1.6E-73 T 23-04-2016 RR42_RS19335 aa8bbb73d36aa9104708319a149e2504 231 SUPERFAMILY SSF56808 6 224 1.1E-78 T 23-04-2016 IPR023674 Ribosomal protein L1-like RR42_RS19335 aa8bbb73d36aa9104708319a149e2504 231 Gene3D G3DSA:3.30.190.20 16 68 6.4E-44 T 23-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 RR42_RS19335 aa8bbb73d36aa9104708319a149e2504 231 Gene3D G3DSA:3.30.190.20 161 225 6.4E-44 T 23-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 RR42_RS19335 aa8bbb73d36aa9104708319a149e2504 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 23-04-2016 IPR023673 Ribosomal protein L1, conserved site RR42_RS19335 aa8bbb73d36aa9104708319a149e2504 231 Pfam PF00687 Ribosomal protein L1p/L10e family 34 220 4.2E-51 T 23-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein RR42_RS19335 aa8bbb73d36aa9104708319a149e2504 231 PIRSF PIRSF002155 1 227 1.6E-74 T 23-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 RR42_RS19335 aa8bbb73d36aa9104708319a149e2504 231 PANTHER PTHR23105 21 229 1.6E-73 T 23-04-2016 RR42_RS16425 b4761c06246b6453a32ee8471c5c5cab 287 Gene3D G3DSA:3.40.50.150 11 263 3.3E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS16425 b4761c06246b6453a32ee8471c5c5cab 287 SUPERFAMILY SSF53335 19 219 2.52E-36 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS16425 b4761c06246b6453a32ee8471c5c5cab 287 PANTHER PTHR10108:SF855 12 210 1.4E-28 T 23-04-2016 RR42_RS16425 b4761c06246b6453a32ee8471c5c5cab 287 Pfam PF08241 Methyltransferase domain 51 148 2.6E-20 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RR42_RS16425 b4761c06246b6453a32ee8471c5c5cab 287 PANTHER PTHR10108 12 210 1.4E-28 T 23-04-2016 RR42_RS13320 c555db3f82dfb313ba1d09994b20357e 284 PANTHER PTHR30164 1 282 3.5E-67 T 23-04-2016 RR42_RS13320 c555db3f82dfb313ba1d09994b20357e 284 Pfam PF06167 Glucose-regulated metallo-peptidase M90 10 278 7.4E-91 T 23-04-2016 IPR010384 MtfA family RR42_RS13320 c555db3f82dfb313ba1d09994b20357e 284 SUPERFAMILY SSF55486 48 280 6.01E-36 T 23-04-2016 RR42_RS13320 c555db3f82dfb313ba1d09994b20357e 284 Gene3D G3DSA:3.40.390.10 35 279 1.6E-30 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RR42_RS19075 3edb8ad058927f19710529b8d1f81402 146 PIRSF PIRSF029720 7 146 3.3E-47 T 23-04-2016 IPR014558 Uncharacterised conserved lipoprotein RR42_RS19075 3edb8ad058927f19710529b8d1f81402 146 PANTHER PTHR39335 54 146 7.6E-37 T 23-04-2016 RR42_RS19075 3edb8ad058927f19710529b8d1f81402 146 Pfam PF03640 Secreted repeat of unknown function 102 144 1.1E-20 T 23-04-2016 IPR005297 Lipoprotein repeat RR42_RS19075 3edb8ad058927f19710529b8d1f81402 146 Pfam PF03640 Secreted repeat of unknown function 53 90 7.9E-13 T 23-04-2016 IPR005297 Lipoprotein repeat RR42_RS06085 ed8f54c55a86aed871a093e98744a00a 240 SMART SM00257 43 87 1.3E-9 T 23-04-2016 IPR018392 LysM domain RR42_RS06085 ed8f54c55a86aed871a093e98744a00a 240 Pfam PF01476 LysM domain 44 86 5.0E-9 T 23-04-2016 IPR018392 LysM domain RR42_RS06085 ed8f54c55a86aed871a093e98744a00a 240 Gene3D G3DSA:2.70.70.10 115 237 7.3E-33 T 23-04-2016 RR42_RS06085 ed8f54c55a86aed871a093e98744a00a 240 PANTHER PTHR21666 55 240 3.4E-25 T 23-04-2016 RR42_RS06085 ed8f54c55a86aed871a093e98744a00a 240 SUPERFAMILY SSF51261 44 236 2.46E-35 T 23-04-2016 IPR011055 Duplicated hybrid motif RR42_RS06085 ed8f54c55a86aed871a093e98744a00a 240 Pfam PF01551 Peptidase family M23 143 232 5.9E-24 T 23-04-2016 IPR016047 Peptidase M23 RR42_RS06085 ed8f54c55a86aed871a093e98744a00a 240 Gene3D G3DSA:3.10.350.10 43 87 3.4E-15 T 23-04-2016 IPR018392 LysM domain RR42_RS22835 854063a19a71aab239e9206dade3c4a0 194 Pfam PF00350 Dynamin family 86 153 2.5E-7 T 23-04-2016 IPR022812 Dynamin superfamily RR42_RS22835 854063a19a71aab239e9206dade3c4a0 194 Gene3D G3DSA:3.40.50.300 73 140 2.7E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS22835 854063a19a71aab239e9206dade3c4a0 194 SUPERFAMILY SSF52540 62 146 2.19E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14705 66830e925965a90cc4995913dd401961 110 PANTHER PTHR30561 1 110 1.4E-48 T 23-04-2016 RR42_RS14705 66830e925965a90cc4995913dd401961 110 SUPERFAMILY SSF103481 7 106 1.7E-19 T 23-04-2016 RR42_RS14705 66830e925965a90cc4995913dd401961 110 Pfam PF00893 Small Multidrug Resistance protein 3 94 1.1E-26 T 23-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 RR42_RS14705 66830e925965a90cc4995913dd401961 110 PANTHER PTHR30561:SF1 1 110 1.4E-48 T 23-04-2016 RR42_RS05145 dd20b1c54c48ca55d7de5565f141cf91 197 PANTHER PTHR21366 1 162 9.3E-17 T 23-04-2016 RR42_RS05145 dd20b1c54c48ca55d7de5565f141cf91 197 Gene3D G3DSA:3.10.180.10 4 149 1.4E-42 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS05145 dd20b1c54c48ca55d7de5565f141cf91 197 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 131 9.2E-23 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RR42_RS05145 dd20b1c54c48ca55d7de5565f141cf91 197 SUPERFAMILY SSF54593 3 150 4.97E-39 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS17930 35208fcf079fe5f79bdcda3af8d7c9f9 220 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.526 T 23-04-2016 IPR022927 RNA pyrophosphohydrolase RppH RR42_RS17930 35208fcf079fe5f79bdcda3af8d7c9f9 220 PRINTS PR00502 NUDIX hydrolase family signature 47 62 4.4E-7 T 23-04-2016 IPR020476 NUDIX hydrolase RR42_RS17930 35208fcf079fe5f79bdcda3af8d7c9f9 220 PRINTS PR00502 NUDIX hydrolase family signature 33 47 4.4E-7 T 23-04-2016 IPR020476 NUDIX hydrolase RR42_RS17930 35208fcf079fe5f79bdcda3af8d7c9f9 220 PANTHER PTHR23114 1 158 3.3E-37 T 23-04-2016 RR42_RS17930 35208fcf079fe5f79bdcda3af8d7c9f9 220 Pfam PF00293 NUDIX domain 7 136 3.6E-23 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RR42_RS17930 35208fcf079fe5f79bdcda3af8d7c9f9 220 SUPERFAMILY SSF55811 6 168 1.23E-29 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RR42_RS17930 35208fcf079fe5f79bdcda3af8d7c9f9 220 Gene3D G3DSA:3.90.79.10 7 152 1.9E-28 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RR42_RS17930 35208fcf079fe5f79bdcda3af8d7c9f9 220 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RR42_RS10805 09264a1edc93db7dd556009cdba82bd4 328 SUPERFAMILY SSF161098 93 310 1.09E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS10805 09264a1edc93db7dd556009cdba82bd4 328 PANTHER PTHR30465 6 324 7.3E-103 T 23-04-2016 RR42_RS10805 09264a1edc93db7dd556009cdba82bd4 328 PANTHER PTHR30465:SF0 6 324 7.3E-103 T 23-04-2016 RR42_RS10805 09264a1edc93db7dd556009cdba82bd4 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 323 1.3E-42 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS10805 09264a1edc93db7dd556009cdba82bd4 328 Gene3D G3DSA:1.10.3720.10 93 320 2.2E-22 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS03700 93f435c61d663a8aecbb3a222bda065b 91 TIGRFAM TIGR02953 penta_MxKDx: pentapeptide MXKDX repeat protein 5 62 1.7E-13 T 23-04-2016 IPR014299 Pentapeptide MXKDX repeat protein RR42_RS06130 687850b6b0d02eb76f5d243a7a31ffe2 169 Pfam PF01202 Shikimate kinase 9 142 4.9E-12 T 23-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 RR42_RS06130 687850b6b0d02eb76f5d243a7a31ffe2 169 PANTHER PTHR11603 1 162 1.5E-70 T 23-04-2016 RR42_RS06130 687850b6b0d02eb76f5d243a7a31ffe2 169 SUPERFAMILY SSF52540 1 157 8.63E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS06130 687850b6b0d02eb76f5d243a7a31ffe2 169 Gene3D G3DSA:3.40.50.300 1 160 1.4E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14415 9bc255ce73f7108683e1315ed86184a7 424 PANTHER PTHR30482:SF9 70 422 8.8E-171 T 23-04-2016 RR42_RS14415 9bc255ce73f7108683e1315ed86184a7 424 PANTHER PTHR30482 70 422 8.8E-171 T 23-04-2016 RR42_RS14415 9bc255ce73f7108683e1315ed86184a7 424 Pfam PF02653 Branched-chain amino acid transport system / permease component 119 405 2.7E-52 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RR42_RS14415 9bc255ce73f7108683e1315ed86184a7 424 Pfam PF11862 Domain of unknown function (DUF3382) 19 110 1.3E-24 T 23-04-2016 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal RR42_RS05520 58c5264b399e429eecf2ad78049abf7b 199 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 120 141 - T 23-04-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 RR42_RS05520 58c5264b399e429eecf2ad78049abf7b 199 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 32 158 6.8E-42 T 23-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 RR42_RS05520 58c5264b399e429eecf2ad78049abf7b 199 PANTHER PTHR10884 14 177 3.4E-70 T 23-04-2016 RR42_RS05520 58c5264b399e429eecf2ad78049abf7b 199 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 86 147 4.0E-19 T 23-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 RR42_RS05520 58c5264b399e429eecf2ad78049abf7b 199 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 7 167 34.592 T 23-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 RR42_RS05520 58c5264b399e429eecf2ad78049abf7b 199 SUPERFAMILY SSF143243 8 181 2.22E-56 T 23-04-2016 RR42_RS05520 58c5264b399e429eecf2ad78049abf7b 199 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 32 160 2.6E-43 T 23-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 RR42_RS37730 6ba75a67c921401d96c9a0fb1b6f2a98 76 Gene3D G3DSA:2.60.120.10 35 76 4.3E-8 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS37730 6ba75a67c921401d96c9a0fb1b6f2a98 76 SUPERFAMILY SSF51182 2 76 4.84E-15 T 23-04-2016 IPR011051 RmlC-like cupin domain RR42_RS37730 6ba75a67c921401d96c9a0fb1b6f2a98 76 Pfam PF07883 Cupin domain 33 76 3.0E-9 T 23-04-2016 IPR013096 Cupin 2, conserved barrel RR42_RS12275 439aa899f9a47e45b7fecf5a24a72ea7 71 Pfam PF03459 TOBE domain 8 67 1.3E-16 T 23-04-2016 IPR005116 Transport-associated OB, type 1 RR42_RS12275 439aa899f9a47e45b7fecf5a24a72ea7 71 SUPERFAMILY SSF50331 6 69 2.07E-17 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RR42_RS12275 439aa899f9a47e45b7fecf5a24a72ea7 71 Gene3D G3DSA:2.40.50.100 6 69 2.1E-22 T 23-04-2016 RR42_RS12275 439aa899f9a47e45b7fecf5a24a72ea7 71 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 6 69 2.3E-18 T 23-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 RR42_RS05975 14c0e567b694abed0cb52596bc716c8c 273 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 88 99 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RR42_RS05975 14c0e567b694abed0cb52596bc716c8c 273 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 5 155 3.0E-68 T 23-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 RR42_RS05975 14c0e567b694abed0cb52596bc716c8c 273 Pfam PF14697 4Fe-4S dicluster domain 81 135 5.6E-17 T 23-04-2016 RR42_RS05975 14c0e567b694abed0cb52596bc716c8c 273 PANTHER PTHR11938:SF64 10 145 4.2E-52 T 23-04-2016 RR42_RS05975 14c0e567b694abed0cb52596bc716c8c 273 Gene3D G3DSA:3.30.70.20 60 142 5.3E-16 T 23-04-2016 RR42_RS05975 14c0e567b694abed0cb52596bc716c8c 273 Pfam PF04060 Putative Fe-S cluster 16 48 2.5E-12 T 23-04-2016 IPR007202 4Fe-4S domain GO:0051536 RR42_RS05975 14c0e567b694abed0cb52596bc716c8c 273 SUPERFAMILY SSF54862 11 139 8.79E-28 T 23-04-2016 RR42_RS05975 14c0e567b694abed0cb52596bc716c8c 273 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 118 129 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RR42_RS05975 14c0e567b694abed0cb52596bc716c8c 273 PANTHER PTHR11938 10 145 4.2E-52 T 23-04-2016 RR42_RS05395 07ff46cdd04b2ad1dff2ce3acf438a78 112 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 52 63 - T 23-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 RR42_RS05395 07ff46cdd04b2ad1dff2ce3acf438a78 112 PANTHER PTHR34299:SF1 1 112 1.9E-27 T 23-04-2016 RR42_RS05395 07ff46cdd04b2ad1dff2ce3acf438a78 112 Gene3D G3DSA:1.10.3830.10 2 101 2.5E-36 T 23-04-2016 RR42_RS05395 07ff46cdd04b2ad1dff2ce3acf438a78 112 PANTHER PTHR34299 1 112 1.9E-27 T 23-04-2016 RR42_RS05395 07ff46cdd04b2ad1dff2ce3acf438a78 112 Pfam PF01219 Prokaryotic diacylglycerol kinase 2 98 1.9E-30 T 23-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 RR42_RS13585 b6e4d3309015f4fe571920da4752caef 240 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 231 5.8E-88 T 23-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS13585 b6e4d3309015f4fe571920da4752caef 240 Gene3D G3DSA:3.30.420.10 1 175 3.8E-65 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS13585 b6e4d3309015f4fe571920da4752caef 240 Pfam PF00929 Exonuclease 4 165 3.5E-36 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RR42_RS13585 b6e4d3309015f4fe571920da4752caef 240 PANTHER PTHR30231:SF0 1 231 1.6E-95 T 23-04-2016 RR42_RS13585 b6e4d3309015f4fe571920da4752caef 240 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 179 8.1E-61 T 23-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS13585 b6e4d3309015f4fe571920da4752caef 240 SMART SM00479 2 174 3.4E-51 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RR42_RS13585 b6e4d3309015f4fe571920da4752caef 240 SUPERFAMILY SSF53098 1 175 1.68E-56 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS13585 b6e4d3309015f4fe571920da4752caef 240 PANTHER PTHR30231 1 231 1.6E-95 T 23-04-2016 RR42_RS07820 a21997c00d6ede75c323f24aa7ce7653 414 PANTHER PTHR13847:SF190 14 410 6.1E-70 T 23-04-2016 RR42_RS07820 a21997c00d6ede75c323f24aa7ce7653 414 PANTHER PTHR13847 14 410 6.1E-70 T 23-04-2016 RR42_RS07820 a21997c00d6ede75c323f24aa7ce7653 414 Pfam PF01266 FAD dependent oxidoreductase 16 366 1.1E-54 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RR42_RS07820 a21997c00d6ede75c323f24aa7ce7653 414 SUPERFAMILY SSF51905 331 393 3.56E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS07820 a21997c00d6ede75c323f24aa7ce7653 414 SUPERFAMILY SSF51905 15 239 3.56E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS07820 a21997c00d6ede75c323f24aa7ce7653 414 Gene3D G3DSA:3.50.50.60 158 238 3.2E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS07820 a21997c00d6ede75c323f24aa7ce7653 414 Gene3D G3DSA:3.50.50.60 331 378 3.2E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS07820 a21997c00d6ede75c323f24aa7ce7653 414 Gene3D G3DSA:3.50.50.60 9 105 3.2E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS11620 fad64cc86295717a821e9d04f38683af 265 PANTHER PTHR32027:SF8 39 265 1.3E-39 T 23-04-2016 RR42_RS11620 fad64cc86295717a821e9d04f38683af 265 Pfam PF01522 Polysaccharide deacetylase 98 229 4.7E-20 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RR42_RS11620 fad64cc86295717a821e9d04f38683af 265 PANTHER PTHR32027 39 265 1.3E-39 T 23-04-2016 RR42_RS11620 fad64cc86295717a821e9d04f38683af 265 SUPERFAMILY SSF88713 58 232 2.13E-29 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RR42_RS11620 fad64cc86295717a821e9d04f38683af 265 Gene3D G3DSA:3.20.20.370 98 230 6.8E-18 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RR42_RS18345 ef593da839129896034896fa8147999b 601 Pfam PF13180 PDZ domain 497 572 5.4E-8 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS18345 ef593da839129896034896fa8147999b 601 PANTHER PTHR22939:SF73 486 585 7.9E-14 T 23-04-2016 RR42_RS18345 ef593da839129896034896fa8147999b 601 SUPERFAMILY SSF50156 483 586 3.81E-12 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS18345 ef593da839129896034896fa8147999b 601 Pfam PF05299 M61 glycyl aminopeptidase 285 401 2.1E-47 T 23-04-2016 IPR007963 Peptidase M61, catalytic domain RR42_RS18345 ef593da839129896034896fa8147999b 601 PIRSF PIRSF016493 1 600 2.4E-208 T 23-04-2016 IPR024191 Peptidase M61 RR42_RS18345 ef593da839129896034896fa8147999b 601 Gene3D G3DSA:2.30.42.10 484 583 1.5E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RR42_RS18345 ef593da839129896034896fa8147999b 601 SUPERFAMILY SSF55486 247 434 4.98E-7 T 23-04-2016 RR42_RS18345 ef593da839129896034896fa8147999b 601 PANTHER PTHR22939 486 585 7.9E-14 T 23-04-2016 RR42_RS31350 f60e8b50992649e8303d3b0c883dc49c 184 Pfam PF00285 Citrate synthase, C-terminal domain 4 182 3.4E-52 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS31350 f60e8b50992649e8303d3b0c883dc49c 184 Gene3D G3DSA:1.10.230.10 116 182 5.5E-20 T 23-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain RR42_RS31350 f60e8b50992649e8303d3b0c883dc49c 184 ProSitePatterns PS00480 Citrate synthase signature. 137 149 - T 23-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 RR42_RS31350 f60e8b50992649e8303d3b0c883dc49c 184 SUPERFAMILY SSF48256 2 184 1.16E-55 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS31350 f60e8b50992649e8303d3b0c883dc49c 184 Gene3D G3DSA:1.10.580.10 2 115 1.7E-37 T 23-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 RR42_RS31350 f60e8b50992649e8303d3b0c883dc49c 184 PRINTS PR00143 Citrate synthase signature 55 70 2.5E-23 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS31350 f60e8b50992649e8303d3b0c883dc49c 184 PRINTS PR00143 Citrate synthase signature 77 105 2.5E-23 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS31350 f60e8b50992649e8303d3b0c883dc49c 184 PRINTS PR00143 Citrate synthase signature 5 18 2.5E-23 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS31350 f60e8b50992649e8303d3b0c883dc49c 184 PRINTS PR00143 Citrate synthase signature 130 150 2.5E-23 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS31350 f60e8b50992649e8303d3b0c883dc49c 184 PANTHER PTHR11739 1 182 5.3E-65 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RR42_RS31350 f60e8b50992649e8303d3b0c883dc49c 184 PANTHER PTHR11739:SF4 1 182 5.3E-65 T 23-04-2016 RR42_RS00625 fa3cddec21b78aa22cae706b0f6cd88a 119 Pfam PF11142 Protein of unknown function (DUF2917) 10 70 8.4E-18 T 23-04-2016 IPR021317 Protein of unknown function DUF2917 RR42_RS11205 6b1a3ce89d04a0311651186a3155c6db 388 Gene3D G3DSA:3.30.9.10 224 312 7.8E-17 T 23-04-2016 RR42_RS11205 6b1a3ce89d04a0311651186a3155c6db 388 Gene3D G3DSA:3.30.9.10 88 148 7.8E-17 T 23-04-2016 RR42_RS11205 6b1a3ce89d04a0311651186a3155c6db 388 SUPERFAMILY SSF51905 317 375 1.17E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS11205 6b1a3ce89d04a0311651186a3155c6db 388 SUPERFAMILY SSF51905 12 224 1.17E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS11205 6b1a3ce89d04a0311651186a3155c6db 388 Pfam PF01266 FAD dependent oxidoreductase 13 355 5.3E-48 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RR42_RS11205 6b1a3ce89d04a0311651186a3155c6db 388 PANTHER PTHR13847 1 383 7.2E-44 T 23-04-2016 RR42_RS11205 6b1a3ce89d04a0311651186a3155c6db 388 PANTHER PTHR13847:SF206 1 383 7.2E-44 T 23-04-2016 RR42_RS11205 6b1a3ce89d04a0311651186a3155c6db 388 Gene3D G3DSA:3.50.50.60 8 87 2.1E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS11205 6b1a3ce89d04a0311651186a3155c6db 388 Gene3D G3DSA:3.50.50.60 317 367 2.1E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS11205 6b1a3ce89d04a0311651186a3155c6db 388 Gene3D G3DSA:3.50.50.60 149 223 2.1E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS03080 379efa30843fdaf225b893e82bdcc35d 357 SMART SM00382 68 239 6.2E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS03080 379efa30843fdaf225b893e82bdcc35d 357 Gene3D G3DSA:3.40.50.300 42 278 1.1E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03080 379efa30843fdaf225b893e82bdcc35d 357 PANTHER PTHR22942:SF1 15 346 6.6E-203 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RR42_RS03080 379efa30843fdaf225b893e82bdcc35d 357 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 14 335 3.6E-171 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RR42_RS03080 379efa30843fdaf225b893e82bdcc35d 357 Gene3D G3DSA:3.30.250.10 279 337 2.3E-31 T 23-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal RR42_RS03080 379efa30843fdaf225b893e82bdcc35d 357 SUPERFAMILY SSF52540 14 278 5.35E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03080 379efa30843fdaf225b893e82bdcc35d 357 PRINTS PR00142 RecA protein signature 254 283 7.8E-86 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RR42_RS03080 379efa30843fdaf225b893e82bdcc35d 357 PRINTS PR00142 RecA protein signature 221 249 7.8E-86 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RR42_RS03080 379efa30843fdaf225b893e82bdcc35d 357 PRINTS PR00142 RecA protein signature 176 205 7.8E-86 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RR42_RS03080 379efa30843fdaf225b893e82bdcc35d 357 PRINTS PR00142 RecA protein signature 308 325 7.8E-86 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RR42_RS03080 379efa30843fdaf225b893e82bdcc35d 357 PRINTS PR00142 RecA protein signature 104 133 7.8E-86 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RR42_RS03080 379efa30843fdaf225b893e82bdcc35d 357 PRINTS PR00142 RecA protein signature 138 167 7.8E-86 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RR42_RS03080 379efa30843fdaf225b893e82bdcc35d 357 PANTHER PTHR22942 15 346 6.6E-203 T 23-04-2016 RR42_RS03080 379efa30843fdaf225b893e82bdcc35d 357 SUPERFAMILY SSF54752 279 337 6.93E-23 T 23-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal RR42_RS03080 379efa30843fdaf225b893e82bdcc35d 357 Hamap MF_00268 Protein RecA [recA]. 15 340 52.017 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RR42_RS03080 379efa30843fdaf225b893e82bdcc35d 357 ProSitePatterns PS00321 recA signature. 224 232 - T 23-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 RR42_RS03080 379efa30843fdaf225b893e82bdcc35d 357 Pfam PF00154 recA bacterial DNA recombination protein 17 279 1.7E-143 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RR42_RS15000 0f680abd37df451efdcbc1cd483c5b4b 267 PANTHER PTHR36445 5 266 6.4E-72 T 23-04-2016 RR42_RS15000 0f680abd37df451efdcbc1cd483c5b4b 267 PANTHER PTHR36445:SF1 5 266 6.4E-72 T 23-04-2016 RR42_RS15000 0f680abd37df451efdcbc1cd483c5b4b 267 Gene3D G3DSA:3.10.270.10 9 262 3.8E-106 T 23-04-2016 RR42_RS15000 0f680abd37df451efdcbc1cd483c5b4b 267 Pfam PF02649 Type I GTP cyclohydrolase folE2 10 258 2.3E-91 T 23-04-2016 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 RR42_RS15000 0f680abd37df451efdcbc1cd483c5b4b 267 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 10 263 37.425 T 23-04-2016 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 RR42_RS08575 f67438bc8014403068cd5e73be0b1c55 182 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 7 145 1.7E-49 T 23-04-2016 IPR006521 Tail protein I RR42_RS08575 f67438bc8014403068cd5e73be0b1c55 182 Pfam PF09684 Phage tail protein (Tail_P2_I) 7 148 9.3E-45 T 23-04-2016 IPR006521 Tail protein I RR42_RS01055 d10e0c472986b4dcae0d5133f295b45e 328 SUPERFAMILY SSF53850 115 285 2.06E-9 T 23-04-2016 RR42_RS01055 d10e0c472986b4dcae0d5133f295b45e 328 PANTHER PTHR30349 3 287 1.9E-70 T 23-04-2016 RR42_RS01055 d10e0c472986b4dcae0d5133f295b45e 328 PANTHER PTHR30349:SF1 3 287 1.9E-70 T 23-04-2016 RR42_RS01055 d10e0c472986b4dcae0d5133f295b45e 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 324 6.0E-70 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS01055 d10e0c472986b4dcae0d5133f295b45e 328 PIRSF PIRSF017082 1 328 2.8E-69 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS16940 d88c7daa7d6e5f488412fd390f93dbe8 323 PANTHER PTHR30024 1 286 3.0E-86 T 23-04-2016 RR42_RS16940 d88c7daa7d6e5f488412fd390f93dbe8 323 PANTHER PTHR30024:SF14 1 286 3.0E-86 T 23-04-2016 RR42_RS16940 d88c7daa7d6e5f488412fd390f93dbe8 323 SUPERFAMILY SSF53850 33 252 9.62E-37 T 23-04-2016 RR42_RS16940 d88c7daa7d6e5f488412fd390f93dbe8 323 Pfam PF09084 NMT1/THI5 like 43 252 5.9E-22 T 23-04-2016 IPR015168 SsuA/THI5-like RR42_RS16940 d88c7daa7d6e5f488412fd390f93dbe8 323 SMART SM00062 34 280 0.0078 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RR42_RS16940 d88c7daa7d6e5f488412fd390f93dbe8 323 Gene3D G3DSA:3.40.190.10 120 236 4.9E-20 T 23-04-2016 RR42_RS11065 d2bed5945970780fbaf7961c1f32bb46 147 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 13 124 3.1E-20 T 23-04-2016 IPR003736 Phenylacetic acid degradation-related domain RR42_RS11065 d2bed5945970780fbaf7961c1f32bb46 147 Gene3D G3DSA:3.10.129.10 7 129 7.8E-33 T 23-04-2016 IPR029069 HotDog domain RR42_RS11065 d2bed5945970780fbaf7961c1f32bb46 147 Pfam PF03061 Thioesterase superfamily 46 118 9.8E-14 T 23-04-2016 IPR006683 Thioesterase domain RR42_RS11065 d2bed5945970780fbaf7961c1f32bb46 147 SUPERFAMILY SSF54637 6 127 2.42E-30 T 23-04-2016 IPR029069 HotDog domain RR42_RS11065 d2bed5945970780fbaf7961c1f32bb46 147 PANTHER PTHR12418 11 141 1.5E-26 T 23-04-2016 RR42_RS18660 023f8488b7487009166a412cb2303bd5 452 PANTHER PTHR38733 1 450 4.0E-75 T 23-04-2016 RR42_RS18660 023f8488b7487009166a412cb2303bd5 452 PANTHER PTHR38733:SF1 1 450 4.0E-75 T 23-04-2016 RR42_RS18660 023f8488b7487009166a412cb2303bd5 452 Pfam PF10117 McrBC 5-methylcytosine restriction system component 63 388 5.7E-98 T 23-04-2016 IPR019292 5-methylcytosine restriction system component RR42_RS15865 b23ffab8a82ad737c1518cc4ce5396dd 175 Gene3D G3DSA:3.40.50.2020 30 146 1.8E-30 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS15865 b23ffab8a82ad737c1518cc4ce5396dd 175 PANTHER PTHR11608 36 140 1.3E-37 T 23-04-2016 RR42_RS15865 b23ffab8a82ad737c1518cc4ce5396dd 175 SUPERFAMILY SSF53271 28 145 7.87E-29 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS15865 b23ffab8a82ad737c1518cc4ce5396dd 175 Pfam PF00156 Phosphoribosyl transferase domain 11 137 2.7E-15 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RR42_RS13615 40cf28670ba13d783cfbb81d40cec59f 261 Gene3D G3DSA:3.30.530.20 2 159 1.4E-37 T 23-04-2016 IPR023393 START-like domain RR42_RS13615 40cf28670ba13d783cfbb81d40cec59f 261 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 9 146 1.8E-18 T 23-04-2016 IPR010419 Carbon monoxide dehydrogenase subunit G RR42_RS13615 40cf28670ba13d783cfbb81d40cec59f 261 SUPERFAMILY SSF55961 2 146 1.84E-29 T 23-04-2016 RR42_RS13615 40cf28670ba13d783cfbb81d40cec59f 261 PANTHER PTHR38588 2 201 4.5E-22 T 23-04-2016 RR42_RS13615 40cf28670ba13d783cfbb81d40cec59f 261 PANTHER PTHR38588:SF1 2 201 4.5E-22 T 23-04-2016 RR42_RS13485 4388451fe797278766eb307d7b2f850d 627 ProSitePatterns PS00674 AAA-protein family signature. 293 311 - T 23-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 RR42_RS13485 4388451fe797278766eb307d7b2f850d 627 Gene3D G3DSA:1.10.8.60 334 407 2.1E-29 T 23-04-2016 RR42_RS13485 4388451fe797278766eb307d7b2f850d 627 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 322 3.2E-46 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RR42_RS13485 4388451fe797278766eb307d7b2f850d 627 Pfam PF01434 Peptidase family M41 384 590 3.9E-77 T 23-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 RR42_RS13485 4388451fe797278766eb307d7b2f850d 627 Pfam PF06480 FtsH Extracellular 11 86 1.5E-7 T 23-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 RR42_RS13485 4388451fe797278766eb307d7b2f850d 627 PANTHER PTHR23076 5 600 0.0 T 23-04-2016 RR42_RS13485 4388451fe797278766eb307d7b2f850d 627 SUPERFAMILY SSF140990 404 600 1.57E-71 T 23-04-2016 RR42_RS13485 4388451fe797278766eb307d7b2f850d 627 Gene3D G3DSA:3.40.50.300 149 333 1.6E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13485 4388451fe797278766eb307d7b2f850d 627 SMART SM00382 186 325 1.8E-26 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS13485 4388451fe797278766eb307d7b2f850d 627 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 104 591 1.3E-232 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 RR42_RS13485 4388451fe797278766eb307d7b2f850d 627 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 4 597 36.977 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 RR42_RS13485 4388451fe797278766eb307d7b2f850d 627 SUPERFAMILY SSF52540 150 393 2.07E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS09750 b0e992c52eb48a93d628c47092a331d0 276 SUPERFAMILY SSF52402 1 144 7.53E-21 T 23-04-2016 RR42_RS09750 b0e992c52eb48a93d628c47092a331d0 276 Gene3D G3DSA:3.40.50.620 156 274 5.9E-16 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS09750 b0e992c52eb48a93d628c47092a331d0 276 Gene3D G3DSA:3.40.50.620 1 144 8.3E-16 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS09750 b0e992c52eb48a93d628c47092a331d0 276 PRINTS PR01438 Universal stress protein signature 254 276 9.6E-9 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS09750 b0e992c52eb48a93d628c47092a331d0 276 PRINTS PR01438 Universal stress protein signature 236 248 9.6E-9 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS09750 b0e992c52eb48a93d628c47092a331d0 276 PRINTS PR01438 Universal stress protein signature 3 21 9.6E-9 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS09750 b0e992c52eb48a93d628c47092a331d0 276 SUPERFAMILY SSF52402 155 275 2.68E-18 T 23-04-2016 RR42_RS09750 b0e992c52eb48a93d628c47092a331d0 276 Pfam PF00582 Universal stress protein family 226 274 1.6E-8 T 23-04-2016 IPR006016 UspA GO:0006950 RR42_RS09750 b0e992c52eb48a93d628c47092a331d0 276 Pfam PF00582 Universal stress protein family 3 144 2.2E-9 T 23-04-2016 IPR006016 UspA GO:0006950 RR42_RS14890 ef56cf2854a1b55646fc5c52417e4ea7 238 SUPERFAMILY SSF74653 114 204 8.44E-9 T 23-04-2016 RR42_RS14890 ef56cf2854a1b55646fc5c52417e4ea7 238 Gene3D G3DSA:3.30.1150.10 121 205 4.8E-6 T 23-04-2016 RR42_RS14890 ef56cf2854a1b55646fc5c52417e4ea7 238 Pfam PF07660 Secretin and TonB N terminus short domain 64 114 1.3E-8 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 RR42_RS14890 ef56cf2854a1b55646fc5c52417e4ea7 238 SMART SM00965 64 115 6.2E-13 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 RR42_RS19070 6fb2c7ea70e2dd10de0c7d3998b891aa 185 SUPERFAMILY SSF88659 102 161 5.89E-15 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS19070 6fb2c7ea70e2dd10de0c7d3998b891aa 185 PANTHER PTHR30173:SF6 4 162 6.5E-28 T 23-04-2016 RR42_RS19070 6fb2c7ea70e2dd10de0c7d3998b891aa 185 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 7 157 8.7E-15 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS19070 6fb2c7ea70e2dd10de0c7d3998b891aa 185 SUPERFAMILY SSF88946 4 92 1.29E-10 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS19070 6fb2c7ea70e2dd10de0c7d3998b891aa 185 Gene3D G3DSA:1.10.10.10 102 161 3.3E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19070 6fb2c7ea70e2dd10de0c7d3998b891aa 185 Pfam PF08281 Sigma-70, region 4 104 156 1.9E-15 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS19070 6fb2c7ea70e2dd10de0c7d3998b891aa 185 PANTHER PTHR30173 4 162 6.5E-28 T 23-04-2016 RR42_RS19070 6fb2c7ea70e2dd10de0c7d3998b891aa 185 Gene3D G3DSA:1.10.1740.10 3 81 3.2E-18 T 23-04-2016 RR42_RS19070 6fb2c7ea70e2dd10de0c7d3998b891aa 185 Pfam PF04542 Sigma-70 region 2 11 81 6.2E-8 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS00950 412da171487fb41d15eed2d78530a596 313 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 217 233 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RR42_RS00950 412da171487fb41d15eed2d78530a596 313 PANTHER PTHR10996 13 308 3.1E-105 T 23-04-2016 RR42_RS00950 412da171487fb41d15eed2d78530a596 313 PANTHER PTHR10996:SF114 13 308 3.1E-105 T 23-04-2016 RR42_RS00950 412da171487fb41d15eed2d78530a596 313 Gene3D G3DSA:3.40.50.720 114 279 7.0E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS00950 412da171487fb41d15eed2d78530a596 313 Gene3D G3DSA:3.40.50.720 14 113 3.5E-12 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS00950 412da171487fb41d15eed2d78530a596 313 SUPERFAMILY SSF51735 98 278 1.05E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS00950 412da171487fb41d15eed2d78530a596 313 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 278 3.9E-43 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RR42_RS07605 dfc107a47069eb6f1a74dc1072f6aa0c 597 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 70 594 5.5E-230 T 23-04-2016 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00917 RR42_RS07605 dfc107a47069eb6f1a74dc1072f6aa0c 597 Gene3D G3DSA:3.40.50.1820 201 566 9.0E-40 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS07605 dfc107a47069eb6f1a74dc1072f6aa0c 597 SUPERFAMILY SSF53474 231 527 7.21E-39 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS07605 dfc107a47069eb6f1a74dc1072f6aa0c 597 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 107 273 2.5E-67 T 23-04-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- RR42_RS07605 dfc107a47069eb6f1a74dc1072f6aa0c 597 PANTHER PTHR36837:SF2 107 596 8.0E-186 T 23-04-2016 RR42_RS07605 dfc107a47069eb6f1a74dc1072f6aa0c 597 PANTHER PTHR36837 107 596 8.0E-186 T 23-04-2016 RR42_RS19650 25d0f426c688584244780f420e39fc67 145 PRINTS PR01438 Universal stress protein signature 123 145 9.4E-9 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS19650 25d0f426c688584244780f420e39fc67 145 PRINTS PR01438 Universal stress protein signature 2 20 9.4E-9 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS19650 25d0f426c688584244780f420e39fc67 145 PRINTS PR01438 Universal stress protein signature 105 117 9.4E-9 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS19650 25d0f426c688584244780f420e39fc67 145 PANTHER PTHR31964:SF45 1 143 2.0E-20 T 23-04-2016 RR42_RS19650 25d0f426c688584244780f420e39fc67 145 Pfam PF00582 Universal stress protein family 1 144 9.5E-29 T 23-04-2016 IPR006016 UspA GO:0006950 RR42_RS19650 25d0f426c688584244780f420e39fc67 145 PANTHER PTHR31964 1 143 2.0E-20 T 23-04-2016 RR42_RS19650 25d0f426c688584244780f420e39fc67 145 SUPERFAMILY SSF52402 1 144 5.44E-30 T 23-04-2016 RR42_RS19650 25d0f426c688584244780f420e39fc67 145 Gene3D G3DSA:3.40.50.620 1 143 3.8E-30 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS01110 4681cf24820c5a2abf475f3e4510411c 75 Pfam PF14375 Cysteine-rich CWC 18 61 5.3E-8 T 23-04-2016 IPR032720 Cysteine-rich CWC RR42_RS13335 f141dcf9cf23fcadc0d6bc7dc41619e1 448 PANTHER PTHR11206 4 448 8.5E-95 T 23-04-2016 RR42_RS13335 f141dcf9cf23fcadc0d6bc7dc41619e1 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 14 421 3.3E-72 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RR42_RS13335 f141dcf9cf23fcadc0d6bc7dc41619e1 448 Pfam PF01554 MatE 240 400 1.0E-28 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RR42_RS13335 f141dcf9cf23fcadc0d6bc7dc41619e1 448 Pfam PF01554 MatE 14 173 4.6E-28 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RR42_RS13335 f141dcf9cf23fcadc0d6bc7dc41619e1 448 PIRSF PIRSF006603 5 448 1.3E-52 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RR42_RS13335 f141dcf9cf23fcadc0d6bc7dc41619e1 448 PANTHER PTHR11206:SF153 4 448 8.5E-95 T 23-04-2016 RR42_RS01240 f03e0e2a9b14cb782140740938a323d0 450 SUPERFAMILY SSF52151 73 145 9.07E-52 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RR42_RS01240 f03e0e2a9b14cb782140740938a323d0 450 SUPERFAMILY SSF52151 198 422 9.07E-52 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RR42_RS01240 f03e0e2a9b14cb782140740938a323d0 450 Gene3D G3DSA:3.40.1090.10 69 145 7.4E-9 T 23-04-2016 RR42_RS01240 f03e0e2a9b14cb782140740938a323d0 450 Gene3D G3DSA:3.40.1090.10 189 294 7.4E-9 T 23-04-2016 RR42_RS01240 f03e0e2a9b14cb782140740938a323d0 450 PANTHER PTHR14226 75 170 8.4E-104 T 23-04-2016 RR42_RS01240 f03e0e2a9b14cb782140740938a323d0 450 PANTHER PTHR14226 203 391 8.4E-104 T 23-04-2016 RR42_RS01240 f03e0e2a9b14cb782140740938a323d0 450 Pfam PF12536 Patatin phospholipase 330 434 3.5E-38 T 23-04-2016 IPR021095 Protein of unknown function DUF3734 RR42_RS01240 f03e0e2a9b14cb782140740938a323d0 450 PANTHER PTHR14226:SF31 203 391 8.4E-104 T 23-04-2016 RR42_RS01240 f03e0e2a9b14cb782140740938a323d0 450 PANTHER PTHR14226:SF31 75 170 8.4E-104 T 23-04-2016 RR42_RS01240 f03e0e2a9b14cb782140740938a323d0 450 Pfam PF01734 Patatin-like phospholipase 76 293 2.5E-24 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RR42_RS14610 4a1c64282f7bab03fe15f685b17d8588 558 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 4 548 1.3E-153 T 23-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RR42_RS14610 4a1c64282f7bab03fe15f685b17d8588 558 PANTHER PTHR30003:SF0 1 558 1.9E-235 T 23-04-2016 RR42_RS14610 4a1c64282f7bab03fe15f685b17d8588 558 PANTHER PTHR30003 1 558 1.9E-235 T 23-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RR42_RS14610 4a1c64282f7bab03fe15f685b17d8588 558 Pfam PF02652 L-lactate permease 14 546 1.2E-152 T 23-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RR42_RS03975 c668eb501c3873b1eeeef57e865ca731 188 PANTHER PTHR23416 17 180 7.3E-38 T 23-04-2016 RR42_RS03975 c668eb501c3873b1eeeef57e865ca731 188 Gene3D G3DSA:2.160.10.10 22 181 6.9E-36 T 23-04-2016 RR42_RS03975 c668eb501c3873b1eeeef57e865ca731 188 SUPERFAMILY SSF51161 22 182 1.34E-35 T 23-04-2016 IPR011004 Trimeric LpxA-like RR42_RS03975 c668eb501c3873b1eeeef57e865ca731 188 PANTHER PTHR23416:SF36 17 180 7.3E-38 T 23-04-2016 RR42_RS14445 ba4d88e4a980f0913ab6f453d61042e8 592 Pfam PF02910 Fumarate reductase flavoprotein C-term 466 591 4.4E-40 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RR42_RS14445 ba4d88e4a980f0913ab6f453d61042e8 592 PANTHER PTHR11632:SF5 1 587 0.0 T 23-04-2016 RR42_RS14445 ba4d88e4a980f0913ab6f453d61042e8 592 Pfam PF00890 FAD binding domain 14 409 6.3E-117 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RR42_RS14445 ba4d88e4a980f0913ab6f453d61042e8 592 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 11 592 7.9E-282 T 23-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RR42_RS14445 ba4d88e4a980f0913ab6f453d61042e8 592 PIRSF PIRSF000171 4 583 3.5E-42 T 23-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit RR42_RS14445 ba4d88e4a980f0913ab6f453d61042e8 592 SUPERFAMILY SSF51905 363 432 1.62E-78 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS14445 ba4d88e4a980f0913ab6f453d61042e8 592 SUPERFAMILY SSF51905 10 264 1.62E-78 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS14445 ba4d88e4a980f0913ab6f453d61042e8 592 SUPERFAMILY SSF56425 241 359 7.48E-44 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RR42_RS14445 ba4d88e4a980f0913ab6f453d61042e8 592 SUPERFAMILY SSF46977 456 592 3.92E-46 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RR42_RS14445 ba4d88e4a980f0913ab6f453d61042e8 592 Gene3D G3DSA:3.90.700.10 248 354 3.4E-41 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RR42_RS14445 ba4d88e4a980f0913ab6f453d61042e8 592 Gene3D G3DSA:1.20.58.100 450 559 2.5E-37 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RR42_RS14445 ba4d88e4a980f0913ab6f453d61042e8 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 387 394 2.5E-6 T 23-04-2016 RR42_RS14445 ba4d88e4a980f0913ab6f453d61042e8 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 14 36 2.5E-6 T 23-04-2016 RR42_RS14445 ba4d88e4a980f0913ab6f453d61042e8 592 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 48 57 - T 23-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 RR42_RS14445 ba4d88e4a980f0913ab6f453d61042e8 592 Gene3D G3DSA:3.50.50.60 355 429 1.4E-119 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS14445 ba4d88e4a980f0913ab6f453d61042e8 592 Gene3D G3DSA:3.50.50.60 10 247 1.4E-119 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS14445 ba4d88e4a980f0913ab6f453d61042e8 592 Gene3D G3DSA:4.10.80.40 560 592 2.8E-22 T 23-04-2016 RR42_RS14445 ba4d88e4a980f0913ab6f453d61042e8 592 PANTHER PTHR11632 1 587 0.0 T 23-04-2016 RR42_RS14445 ba4d88e4a980f0913ab6f453d61042e8 592 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 14 591 4.9E-243 T 23-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RR42_RS10050 b887a2402d76b813d1c5a2ec262cbb3a 206 PANTHER PTHR30055 1 204 6.4E-12 T 23-04-2016 RR42_RS10050 b887a2402d76b813d1c5a2ec262cbb3a 206 Gene3D G3DSA:1.10.357.10 1 198 2.7E-21 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS10050 b887a2402d76b813d1c5a2ec262cbb3a 206 SUPERFAMILY SSF46689 1 77 2.05E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS10050 b887a2402d76b813d1c5a2ec262cbb3a 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 61 5.9E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS10365 198edc22df08eb7d199c9eaa6fc91a41 248 PANTHER PTHR24220:SF568 10 241 4.0E-92 T 23-04-2016 RR42_RS10365 198edc22df08eb7d199c9eaa6fc91a41 248 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS10365 198edc22df08eb7d199c9eaa6fc91a41 248 SMART SM00382 33 218 8.6E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS10365 198edc22df08eb7d199c9eaa6fc91a41 248 Pfam PF00005 ABC transporter 24 169 6.3E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS10365 198edc22df08eb7d199c9eaa6fc91a41 248 Gene3D G3DSA:3.40.50.300 6 232 7.8E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS10365 198edc22df08eb7d199c9eaa6fc91a41 248 SUPERFAMILY SSF52540 7 236 6.37E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS10365 198edc22df08eb7d199c9eaa6fc91a41 248 PANTHER PTHR24220 10 241 4.0E-92 T 23-04-2016 RR42_RS00255 a6648e1cbf607f17d856b4493566fb12 227 SUPERFAMILY SSF161098 14 202 2.75E-45 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS00255 a6648e1cbf607f17d856b4493566fb12 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 209 1.7E-16 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS00255 a6648e1cbf607f17d856b4493566fb12 227 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 111 9.0E-30 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RR42_RS00255 a6648e1cbf607f17d856b4493566fb12 227 Gene3D G3DSA:1.10.3720.10 13 210 6.9E-48 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS00255 a6648e1cbf607f17d856b4493566fb12 227 PANTHER PTHR30614 1 222 4.6E-80 T 23-04-2016 RR42_RS01605 d2bdbb9871643027f578c8da56434e15 144 PRINTS PR00332 Histidine triad family signature 32 50 1.2E-15 T 23-04-2016 IPR001310 Histidine triad (HIT) protein RR42_RS01605 d2bdbb9871643027f578c8da56434e15 144 PRINTS PR00332 Histidine triad family signature 99 109 1.2E-15 T 23-04-2016 IPR001310 Histidine triad (HIT) protein RR42_RS01605 d2bdbb9871643027f578c8da56434e15 144 PRINTS PR00332 Histidine triad family signature 11 27 1.2E-15 T 23-04-2016 IPR001310 Histidine triad (HIT) protein RR42_RS01605 d2bdbb9871643027f578c8da56434e15 144 Gene3D G3DSA:3.30.428.10 9 133 8.4E-40 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 RR42_RS01605 d2bdbb9871643027f578c8da56434e15 144 SUPERFAMILY SSF54197 5 140 3.25E-41 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 RR42_RS01605 d2bdbb9871643027f578c8da56434e15 144 Pfam PF01230 HIT domain 17 112 6.6E-26 T 23-04-2016 IPR001310 Histidine triad (HIT) protein RR42_RS01605 d2bdbb9871643027f578c8da56434e15 144 PANTHER PTHR23089 5 114 1.0E-40 T 23-04-2016 IPR001310 Histidine triad (HIT) protein RR42_RS02950 942219d89617f507105131f5b0ad8046 283 PANTHER PTHR22855 1 238 7.3E-72 T 23-04-2016 RR42_RS02950 942219d89617f507105131f5b0ad8046 283 Gene3D G3DSA:3.90.226.10 14 234 1.1E-31 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS02950 942219d89617f507105131f5b0ad8046 283 PANTHER PTHR22855:SF21 1 238 7.3E-72 T 23-04-2016 RR42_RS02950 942219d89617f507105131f5b0ad8046 283 TIGRFAM TIGR03133 malonate_beta: biotin-independent malonate decarboxylase, beta subunit 10 279 3.3E-117 T 23-04-2016 IPR017556 Biotin-independent malonate decarboxylase, beta subunit GO:0016831|GO:0044262 MetaCyc: PWY-6060 RR42_RS02950 942219d89617f507105131f5b0ad8046 283 Pfam PF01039 Carboxyl transferase domain 17 239 9.1E-13 T 23-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RR42_RS02950 942219d89617f507105131f5b0ad8046 283 SUPERFAMILY SSF52096 11 236 1.09E-35 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS02910 8d3e01e60f39c51c1fdf1675e56c913a 416 Gene3D G3DSA:3.90.1150.10 287 402 2.8E-12 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS02910 8d3e01e60f39c51c1fdf1675e56c913a 416 Gene3D G3DSA:3.40.640.10 61 286 1.3E-76 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS02910 8d3e01e60f39c51c1fdf1675e56c913a 416 SUPERFAMILY SSF53383 10 402 7.88E-105 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS02910 8d3e01e60f39c51c1fdf1675e56c913a 416 PANTHER PTHR11751 17 402 1.9E-108 T 23-04-2016 RR42_RS02910 8d3e01e60f39c51c1fdf1675e56c913a 416 Pfam PF00155 Aminotransferase class I and II 54 398 4.0E-41 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RR42_RS02910 8d3e01e60f39c51c1fdf1675e56c913a 416 PANTHER PTHR11751:SF294 17 402 1.9E-108 T 23-04-2016 RR42_RS04215 1d473d2dd8040e41c8b689af9b2fa5da 167 PANTHER PTHR30373 18 167 2.8E-37 T 23-04-2016 RR42_RS04215 1d473d2dd8040e41c8b689af9b2fa5da 167 PANTHER PTHR30373:SF3 18 167 2.8E-37 T 23-04-2016 RR42_RS04215 1d473d2dd8040e41c8b689af9b2fa5da 167 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 20 128 1.4E-9 T 23-04-2016 IPR007621 TPM domain RR42_RS06075 02180bc94090c9ef421e372234239bca 256 Pfam PF00106 short chain dehydrogenase 12 208 3.3E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS06075 02180bc94090c9ef421e372234239bca 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 8.0E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS06075 02180bc94090c9ef421e372234239bca 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 8.0E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS06075 02180bc94090c9ef421e372234239bca 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 8.0E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS06075 02180bc94090c9ef421e372234239bca 256 SUPERFAMILY SSF51735 11 243 2.53E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS06075 02180bc94090c9ef421e372234239bca 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 229 0.0076 T 23-04-2016 RR42_RS06075 02180bc94090c9ef421e372234239bca 256 Gene3D G3DSA:3.40.50.720 11 244 8.8E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10745 add4b8467da04e0f1c65fc64309e87a5 550 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 81 444 4.1E-49 T 23-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 RR42_RS10745 add4b8467da04e0f1c65fc64309e87a5 550 PANTHER PTHR11999 69 532 1.2E-117 T 23-04-2016 RR42_RS10745 add4b8467da04e0f1c65fc64309e87a5 550 SUPERFAMILY SSF53383 35 531 2.77E-108 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS10745 add4b8467da04e0f1c65fc64309e87a5 550 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 13 530 1.8E-249 T 23-04-2016 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent RR42_RS10745 add4b8467da04e0f1c65fc64309e87a5 550 Gene3D G3DSA:3.40.640.10 118 398 9.1E-79 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS10745 add4b8467da04e0f1c65fc64309e87a5 550 PANTHER PTHR11999:SF5 69 532 1.2E-117 T 23-04-2016 RR42_RS10745 add4b8467da04e0f1c65fc64309e87a5 550 Gene3D G3DSA:3.90.1150.10 399 532 1.4E-33 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS17000 1bab762202bbe88a18c5f8728348156d 77 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.105 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS17000 1bab762202bbe88a18c5f8728348156d 77 PANTHER PTHR13528 1 68 4.0E-33 T 23-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 RR42_RS17000 1bab762202bbe88a18c5f8728348156d 77 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 2.2E-27 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS17000 1bab762202bbe88a18c5f8728348156d 77 Pfam PF00830 Ribosomal L28 family 3 62 3.7E-27 T 23-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 RR42_RS17000 1bab762202bbe88a18c5f8728348156d 77 SUPERFAMILY SSF143800 1 76 3.53E-30 T 23-04-2016 RR42_RS17000 1bab762202bbe88a18c5f8728348156d 77 Gene3D G3DSA:2.30.170.40 2 76 4.3E-36 T 23-04-2016 RR42_RS02125 75c0cb9f2f472fff89e235e6cd9ed23e 190 PANTHER PTHR32315 3 190 3.1E-81 T 23-04-2016 RR42_RS02125 75c0cb9f2f472fff89e235e6cd9ed23e 190 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 18 187 38.128 T 23-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 RR42_RS02125 75c0cb9f2f472fff89e235e6cd9ed23e 190 SUPERFAMILY SSF53271 18 187 1.08E-52 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS02125 75c0cb9f2f472fff89e235e6cd9ed23e 190 Pfam PF00156 Phosphoribosyl transferase domain 57 166 3.5E-16 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RR42_RS02125 75c0cb9f2f472fff89e235e6cd9ed23e 190 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 18 186 1.6E-66 T 23-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 RR42_RS02125 75c0cb9f2f472fff89e235e6cd9ed23e 190 Gene3D G3DSA:3.40.50.2020 17 188 1.0E-66 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS10580 660c96636b6925b60a80ad5f2040d321 332 Pfam PF13602 Zinc-binding dehydrogenase 186 329 3.7E-36 T 23-04-2016 RR42_RS10580 660c96636b6925b60a80ad5f2040d321 332 SUPERFAMILY SSF51735 116 296 1.67E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10580 660c96636b6925b60a80ad5f2040d321 332 PANTHER PTHR11695 14 332 5.5E-103 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RR42_RS10580 660c96636b6925b60a80ad5f2040d321 332 Gene3D G3DSA:3.40.50.720 107 306 2.0E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10580 660c96636b6925b60a80ad5f2040d321 332 SMART SM00829 10 329 3.7E-40 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RR42_RS10580 660c96636b6925b60a80ad5f2040d321 332 SUPERFAMILY SSF50129 8 149 3.8E-39 T 23-04-2016 IPR011032 GroES-like RR42_RS10580 660c96636b6925b60a80ad5f2040d321 332 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 90 4.7E-12 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RR42_RS10580 660c96636b6925b60a80ad5f2040d321 332 PANTHER PTHR11695:SF294 14 332 5.5E-103 T 23-04-2016 RR42_RS10580 660c96636b6925b60a80ad5f2040d321 332 Gene3D G3DSA:3.90.180.10 1 90 3.1E-20 T 23-04-2016 IPR011032 GroES-like RR42_RS09270 efa18b0af5fa270e48e263d6268c9ae0 476 PANTHER PTHR30288 1 473 2.1E-74 T 23-04-2016 RR42_RS09270 efa18b0af5fa270e48e263d6268c9ae0 476 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 106 7.9E-18 T 23-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 RR42_RS09270 efa18b0af5fa270e48e263d6268c9ae0 476 PANTHER PTHR30288:SF0 1 473 2.1E-74 T 23-04-2016 RR42_RS09270 efa18b0af5fa270e48e263d6268c9ae0 476 Pfam PF07196 Flagellin hook IN motif 142 192 8.9E-9 T 23-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 RR42_RS09270 efa18b0af5fa270e48e263d6268c9ae0 476 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 235 458 6.4E-47 T 23-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 RR42_RS18255 d32e8071764fbf32bd853c0d6e24c810 261 PANTHER PTHR11941 5 258 1.6E-92 T 23-04-2016 RR42_RS18255 d32e8071764fbf32bd853c0d6e24c810 261 TIGRFAM TIGR02280 PaaB1: phenylacetate degradation probable enoyl-CoA hydratase PaaB 6 261 2.0E-123 T 23-04-2016 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB GO:0010124 KEGG: 00360+5.3.3.18|UniPathway: UPA00930 RR42_RS18255 d32e8071764fbf32bd853c0d6e24c810 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 23-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RR42_RS18255 d32e8071764fbf32bd853c0d6e24c810 261 Gene3D G3DSA:3.90.226.10 5 201 1.1E-60 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS18255 d32e8071764fbf32bd853c0d6e24c810 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 260 3.8E-65 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RR42_RS18255 d32e8071764fbf32bd853c0d6e24c810 261 Gene3D G3DSA:1.10.12.10 203 261 6.0E-23 T 23-04-2016 IPR014748 Crontonase, C-terminal RR42_RS18255 d32e8071764fbf32bd853c0d6e24c810 261 SUPERFAMILY SSF52096 4 261 7.62E-82 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS18255 d32e8071764fbf32bd853c0d6e24c810 261 PANTHER PTHR11941:SF76 5 258 1.6E-92 T 23-04-2016 RR42_RS10330 dd1a251f72ca3d1eb8df74c16b4f43de 595 Pfam PF02538 Hydantoinase B/oxoprolinase 11 543 3.9E-101 T 23-04-2016 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 RR42_RS20510 9cf4000e155886c807eaba3edd30f084 64 PANTHER PTHR38453 1 64 4.0E-30 T 23-04-2016 RR42_RS20510 9cf4000e155886c807eaba3edd30f084 64 PANTHER PTHR38453:SF1 1 64 4.0E-30 T 23-04-2016 RR42_RS20510 9cf4000e155886c807eaba3edd30f084 64 Pfam PF04328 Protein of unknown function (DUF466) 5 64 1.2E-28 T 23-04-2016 IPR007423 Protein of unknown function DUF466 RR42_RS17895 61fa014dff7ba8761af424d835252158 180 PANTHER PTHR22573:SF56 15 180 7.3E-39 T 23-04-2016 RR42_RS17895 61fa014dff7ba8761af424d835252158 180 Pfam PF00156 Phosphoribosyl transferase domain 15 164 2.1E-18 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RR42_RS17895 61fa014dff7ba8761af424d835252158 180 Gene3D G3DSA:3.40.50.2020 13 179 1.7E-49 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS17895 61fa014dff7ba8761af424d835252158 180 SUPERFAMILY SSF53271 15 179 1.7E-43 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RR42_RS17895 61fa014dff7ba8761af424d835252158 180 PANTHER PTHR22573 15 180 7.3E-39 T 23-04-2016 RR42_RS19675 257d84ad914ea81b80b415e78d273772 276 SUPERFAMILY SSF46626 36 156 1.12E-21 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS19675 257d84ad914ea81b80b415e78d273772 276 SUPERFAMILY SSF46626 161 275 2.54E-31 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS19675 257d84ad914ea81b80b415e78d273772 276 TIGRFAM TIGR04484 thiosulf_SoxA: sulfur oxidation c-type cytochrome SoxA 50 276 1.6E-74 T 23-04-2016 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 RR42_RS19675 257d84ad914ea81b80b415e78d273772 276 PIRSF PIRSF038455 3 276 2.7E-74 T 23-04-2016 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 RR42_RS19675 257d84ad914ea81b80b415e78d273772 276 Gene3D G3DSA:1.10.760.10 83 275 1.7E-54 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS17855 2fce13e00ce946abc2a2cec7a1546f5f 400 PIRSF PIRSF000355 55 400 1.7E-131 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 RR42_RS17855 2fce13e00ce946abc2a2cec7a1546f5f 400 PANTHER PTHR23409:SF18 64 395 2.7E-146 T 23-04-2016 RR42_RS17855 2fce13e00ce946abc2a2cec7a1546f5f 400 SUPERFAMILY SSF47240 65 371 5.58E-96 T 23-04-2016 IPR009078 Ferritin-like superfamily RR42_RS17855 2fce13e00ce946abc2a2cec7a1546f5f 400 Gene3D G3DSA:1.10.620.20 65 375 3.3E-110 T 23-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 RR42_RS17855 2fce13e00ce946abc2a2cec7a1546f5f 400 PANTHER PTHR23409 64 395 2.7E-146 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 RR42_RS17855 2fce13e00ce946abc2a2cec7a1546f5f 400 Pfam PF00268 Ribonucleotide reductase, small chain 80 367 2.5E-81 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 RR42_RS15890 2189207ceca723411b011c3b4613efc2 396 SUPERFAMILY SSF48452 265 391 7.59E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS15890 2189207ceca723411b011c3b4613efc2 396 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 391 2.4E-121 T 23-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 RR42_RS15890 2189207ceca723411b011c3b4613efc2 396 Pfam PF07219 HemY protein N-terminus 28 131 3.9E-23 T 23-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 RR42_RS15890 2189207ceca723411b011c3b4613efc2 396 Gene3D G3DSA:1.25.40.10 242 391 1.5E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS15630 5d7636f972856c0fdc5dde989fcfdda8 293 PANTHER PTHR30622:SF3 2 136 2.1E-124 T 23-04-2016 RR42_RS15630 5d7636f972856c0fdc5dde989fcfdda8 293 PANTHER PTHR30622:SF3 156 292 2.1E-124 T 23-04-2016 RR42_RS15630 5d7636f972856c0fdc5dde989fcfdda8 293 Pfam PF02673 Bacitracin resistance protein BacA 9 279 6.5E-84 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RR42_RS15630 5d7636f972856c0fdc5dde989fcfdda8 293 PANTHER PTHR30622 2 136 2.1E-124 T 23-04-2016 RR42_RS15630 5d7636f972856c0fdc5dde989fcfdda8 293 PANTHER PTHR30622 156 292 2.1E-124 T 23-04-2016 RR42_RS15630 5d7636f972856c0fdc5dde989fcfdda8 293 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 284 18.276 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RR42_RS01525 12c6eb6545503dd751289dfef2cfa459 333 PANTHER PTHR30349 1 325 1.5E-90 T 23-04-2016 RR42_RS01525 12c6eb6545503dd751289dfef2cfa459 333 PANTHER PTHR30349:SF16 1 325 1.5E-90 T 23-04-2016 RR42_RS01525 12c6eb6545503dd751289dfef2cfa459 333 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 58 329 1.7E-89 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS01525 12c6eb6545503dd751289dfef2cfa459 333 SUPERFAMILY SSF53850 124 295 2.24E-9 T 23-04-2016 RR42_RS01525 12c6eb6545503dd751289dfef2cfa459 333 PIRSF PIRSF017082 1 332 8.9E-84 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS18555 f471aa8114ec40a73eeff50a729ad9e4 178 PANTHER PTHR33204:SF10 1 160 7.4E-49 T 23-04-2016 RR42_RS18555 f471aa8114ec40a73eeff50a729ad9e4 178 Pfam PF01638 HxlR-like helix-turn-helix 19 105 2.7E-20 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type RR42_RS18555 f471aa8114ec40a73eeff50a729ad9e4 178 PANTHER PTHR33204 1 160 7.4E-49 T 23-04-2016 RR42_RS18555 f471aa8114ec40a73eeff50a729ad9e4 178 Gene3D G3DSA:1.10.10.10 4 107 8.3E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS18555 f471aa8114ec40a73eeff50a729ad9e4 178 SUPERFAMILY SSF46785 5 144 5.73E-38 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19620 ef652999fa9f48c7f1eb588a378dbc08 949 Pfam PF10101 Predicted membrane protein (DUF2339) 611 942 6.6E-47 T 23-04-2016 IPR019286 Protein of unknown function DUF2339, transmembrane RR42_RS19620 ef652999fa9f48c7f1eb588a378dbc08 949 Pfam PF10101 Predicted membrane protein (DUF2339) 184 657 1.8E-116 T 23-04-2016 IPR019286 Protein of unknown function DUF2339, transmembrane RR42_RS19620 ef652999fa9f48c7f1eb588a378dbc08 949 PANTHER PTHR38434 33 948 1.0E-88 T 23-04-2016 RR42_RS19620 ef652999fa9f48c7f1eb588a378dbc08 949 PANTHER PTHR38434:SF1 33 948 1.0E-88 T 23-04-2016 RR42_RS19620 ef652999fa9f48c7f1eb588a378dbc08 949 PIRSF PIRSF035905 51 949 1.6E-176 T 23-04-2016 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein RR42_RS20625 2364222cb0dea88c71cf4ce6864d62e8 489 SUPERFAMILY SSF47384 236 324 3.14E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS20625 2364222cb0dea88c71cf4ce6864d62e8 489 SUPERFAMILY SSF55874 334 487 5.37E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS20625 2364222cb0dea88c71cf4ce6864d62e8 489 PANTHER PTHR24423 194 489 5.1E-53 T 23-04-2016 RR42_RS20625 2364222cb0dea88c71cf4ce6864d62e8 489 PANTHER PTHR24423 7 19 5.1E-53 T 23-04-2016 RR42_RS20625 2364222cb0dea88c71cf4ce6864d62e8 489 SMART SM00387 379 489 6.0E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS20625 2364222cb0dea88c71cf4ce6864d62e8 489 Gene3D G3DSA:1.10.287.130 246 322 4.8E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS20625 2364222cb0dea88c71cf4ce6864d62e8 489 PANTHER PTHR24423:SF474 194 489 5.1E-53 T 23-04-2016 RR42_RS20625 2364222cb0dea88c71cf4ce6864d62e8 489 PANTHER PTHR24423:SF474 7 19 5.1E-53 T 23-04-2016 RR42_RS20625 2364222cb0dea88c71cf4ce6864d62e8 489 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 380 487 1.2E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS20625 2364222cb0dea88c71cf4ce6864d62e8 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 444 1.1E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS20625 2364222cb0dea88c71cf4ce6864d62e8 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 430 1.1E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS20625 2364222cb0dea88c71cf4ce6864d62e8 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 486 1.1E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS20625 2364222cb0dea88c71cf4ce6864d62e8 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 466 1.1E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RR42_RS20625 2364222cb0dea88c71cf4ce6864d62e8 489 Pfam PF08521 Two-component sensor kinase N-terminal 30 173 9.6E-39 T 23-04-2016 IPR013727 Two-component sensor kinase, N-terminal RR42_RS20625 2364222cb0dea88c71cf4ce6864d62e8 489 Gene3D G3DSA:3.30.565.10 341 487 2.7E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS20625 2364222cb0dea88c71cf4ce6864d62e8 489 Pfam PF00512 His Kinase A (phospho-acceptor) domain 254 324 1.2E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS20625 2364222cb0dea88c71cf4ce6864d62e8 489 SMART SM00388 253 326 1.1E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RR42_RS15590 f9c78be309ddac8f30c089d391b85b69 509 PANTHER PTHR30108 1 509 2.3E-236 T 23-04-2016 RR42_RS15590 f9c78be309ddac8f30c089d391b85b69 509 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 12 448 1.5E-162 T 23-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 RR42_RS15590 f9c78be309ddac8f30c089d391b85b69 509 SUPERFAMILY SSF143968 340 502 6.02E-66 T 23-04-2016 RR42_RS15590 f9c78be309ddac8f30c089d391b85b69 509 PANTHER PTHR30108:SF1 1 509 2.3E-236 T 23-04-2016 RR42_RS15590 f9c78be309ddac8f30c089d391b85b69 509 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 504 71.873 T 23-04-2016 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 RR42_RS15590 f9c78be309ddac8f30c089d391b85b69 509 Gene3D G3DSA:1.20.5.570 472 502 8.5E-17 T 23-04-2016 RR42_RS15590 f9c78be309ddac8f30c089d391b85b69 509 SUPERFAMILY SSF50475 3 339 1.18E-111 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RR42_RS15590 f9c78be309ddac8f30c089d391b85b69 509 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 472 2.4E-157 T 23-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 RR42_RS15590 f9c78be309ddac8f30c089d391b85b69 509 Gene3D G3DSA:3.40.1670.10 354 470 2.9E-54 T 23-04-2016 RR42_RS03155 92e793c3cd7eb3bcceeac74c770a488b 328 SUPERFAMILY SSF53474 20 301 1.26E-37 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS03155 92e793c3cd7eb3bcceeac74c770a488b 328 Gene3D G3DSA:3.40.50.1820 46 301 1.7E-25 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS03155 92e793c3cd7eb3bcceeac74c770a488b 328 PIRSF PIRSF005211 1 328 8.3E-107 T 23-04-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- RR42_RS03155 92e793c3cd7eb3bcceeac74c770a488b 328 PANTHER PTHR10794 2 295 7.8E-57 T 23-04-2016 RR42_RS03155 92e793c3cd7eb3bcceeac74c770a488b 328 Pfam PF00561 alpha/beta hydrolase fold 54 294 1.2E-13 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS14060 69ea0698743480bc3cfd0014befcc6b7 90 Pfam PF05768 Glutaredoxin-like domain (DUF836) 4 81 3.2E-15 T 23-04-2016 IPR008554 Glutaredoxin-like RR42_RS14060 69ea0698743480bc3cfd0014befcc6b7 90 SUPERFAMILY SSF52833 3 85 1.25E-13 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS14060 69ea0698743480bc3cfd0014befcc6b7 90 Gene3D G3DSA:3.40.30.10 3 83 2.6E-24 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS20415 4a8fde323a0e781ece6c22814c8c97e8 377 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 55 337 4.9E-62 T 23-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 RR42_RS20415 4a8fde323a0e781ece6c22814c8c97e8 377 SUPERFAMILY SSF53850 162 336 7.31E-5 T 23-04-2016 RR42_RS20415 4a8fde323a0e781ece6c22814c8c97e8 377 PANTHER PTHR33376:SF5 1 7 2.9E-147 T 23-04-2016 RR42_RS20415 4a8fde323a0e781ece6c22814c8c97e8 377 PANTHER PTHR33376:SF5 24 359 2.9E-147 T 23-04-2016 RR42_RS20415 4a8fde323a0e781ece6c22814c8c97e8 377 PANTHER PTHR33376 1 7 2.9E-147 T 23-04-2016 RR42_RS20415 4a8fde323a0e781ece6c22814c8c97e8 377 PANTHER PTHR33376 24 359 2.9E-147 T 23-04-2016 RR42_RS20415 4a8fde323a0e781ece6c22814c8c97e8 377 PIRSF PIRSF039026 1 372 2.0E-118 T 23-04-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like RR42_RS04220 fd77ef5a4fd40f6f3dd91e998b930708 286 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 46 173 4.0E-33 T 23-04-2016 IPR007621 TPM domain RR42_RS04220 fd77ef5a4fd40f6f3dd91e998b930708 286 PANTHER PTHR30373:SF2 15 227 8.2E-53 T 23-04-2016 RR42_RS04220 fd77ef5a4fd40f6f3dd91e998b930708 286 PANTHER PTHR30373 15 227 8.2E-53 T 23-04-2016 RR42_RS01180 086b99ac63154cbf45d89755c8379994 276 Gene3D G3DSA:3.10.129.10 10 119 1.1E-8 T 23-04-2016 IPR029069 HotDog domain RR42_RS01180 086b99ac63154cbf45d89755c8379994 276 SUPERFAMILY SSF54637 129 273 4.04E-21 T 23-04-2016 IPR029069 HotDog domain RR42_RS01180 086b99ac63154cbf45d89755c8379994 276 Pfam PF13622 Thioesterase-like superfamily 32 273 1.1E-43 T 23-04-2016 RR42_RS01180 086b99ac63154cbf45d89755c8379994 276 SUPERFAMILY SSF54637 9 119 1.1E-13 T 23-04-2016 IPR029069 HotDog domain RR42_RS13430 61cb55add12a6277c2ec4920e0eef0b6 510 SUPERFAMILY SSF53067 141 318 4.66E-41 T 23-04-2016 RR42_RS13430 61cb55add12a6277c2ec4920e0eef0b6 510 PANTHER PTHR30005 1 508 3.7E-133 T 23-04-2016 RR42_RS13430 61cb55add12a6277c2ec4920e0eef0b6 510 Gene3D G3DSA:3.30.420.150 140 319 2.1E-51 T 23-04-2016 RR42_RS13430 61cb55add12a6277c2ec4920e0eef0b6 510 PIRSF PIRSF001267 1 510 6.5E-192 T 23-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 RR42_RS13430 61cb55add12a6277c2ec4920e0eef0b6 510 SUPERFAMILY SSF109604 321 507 1.02E-41 T 23-04-2016 RR42_RS13430 61cb55add12a6277c2ec4920e0eef0b6 510 SUPERFAMILY SSF53067 7 134 6.41E-30 T 23-04-2016 RR42_RS13430 61cb55add12a6277c2ec4920e0eef0b6 510 Pfam PF02541 Ppx/GppA phosphatase family 41 315 2.2E-67 T 23-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 RR42_RS13430 61cb55add12a6277c2ec4920e0eef0b6 510 PANTHER PTHR30005:SF4 1 508 3.7E-133 T 23-04-2016 RR42_RS13430 61cb55add12a6277c2ec4920e0eef0b6 510 Gene3D G3DSA:3.30.420.40 3 135 4.3E-40 T 23-04-2016 RR42_RS13430 61cb55add12a6277c2ec4920e0eef0b6 510 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 8 314 5.8E-94 T 23-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 RR42_RS13805 acaf9fcad473f0b1a363168eabfe26b7 288 Pfam PF00293 NUDIX domain 149 258 3.0E-8 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RR42_RS13805 acaf9fcad473f0b1a363168eabfe26b7 288 Pfam PF15916 Domain of unknown function (DUF4743) 24 133 1.8E-16 T 23-04-2016 IPR031804 Domain of unknown function DUF4743 RR42_RS13805 acaf9fcad473f0b1a363168eabfe26b7 288 PANTHER PTHR13622 103 280 7.3E-33 T 23-04-2016 RR42_RS13805 acaf9fcad473f0b1a363168eabfe26b7 288 PANTHER PTHR13622:SF8 103 280 7.3E-33 T 23-04-2016 RR42_RS13805 acaf9fcad473f0b1a363168eabfe26b7 288 SUPERFAMILY SSF55811 117 279 1.14E-22 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RR42_RS13805 acaf9fcad473f0b1a363168eabfe26b7 288 Gene3D G3DSA:3.90.79.10 102 280 5.5E-45 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RR42_RS01855 bb983436dcce61fbe4ae290c0dd5d75c 156 PIRSF PIRSF029256 1 156 6.0E-64 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RR42_RS01855 bb983436dcce61fbe4ae290c0dd5d75c 156 PANTHER PTHR12029:SF31 1 154 1.8E-71 T 23-04-2016 RR42_RS01855 bb983436dcce61fbe4ae290c0dd5d75c 156 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 153 32.586 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RR42_RS01855 bb983436dcce61fbe4ae290c0dd5d75c 156 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 4.7E-59 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RR42_RS01855 bb983436dcce61fbe4ae290c0dd5d75c 156 SUPERFAMILY SSF75217 1 154 1.96E-42 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases RR42_RS01855 bb983436dcce61fbe4ae290c0dd5d75c 156 PANTHER PTHR12029 1 154 1.8E-71 T 23-04-2016 RR42_RS01855 bb983436dcce61fbe4ae290c0dd5d75c 156 Pfam PF00588 SpoU rRNA Methylase family 2 143 8.9E-31 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RR42_RS01855 bb983436dcce61fbe4ae290c0dd5d75c 156 Gene3D G3DSA:3.40.1280.10 1 155 2.3E-65 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RR42_RS12765 ea63f289e51fbf8a202c2ec527a73f1d 693 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 249 261 - T 23-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RR42_RS12765 ea63f289e51fbf8a202c2ec527a73f1d 693 PANTHER PTHR24362:SF160 114 387 1.6E-62 T 23-04-2016 RR42_RS12765 ea63f289e51fbf8a202c2ec527a73f1d 693 SUPERFAMILY SSF56112 119 385 1.35E-59 T 23-04-2016 IPR011009 Protein kinase-like domain RR42_RS12765 ea63f289e51fbf8a202c2ec527a73f1d 693 Gene3D G3DSA:3.30.200.20 115 194 7.0E-19 T 23-04-2016 RR42_RS12765 ea63f289e51fbf8a202c2ec527a73f1d 693 Pfam PF14326 Domain of unknown function (DUF4384) 571 643 4.6E-7 T 23-04-2016 IPR025493 Domain of unknown function DUF4384 RR42_RS12765 ea63f289e51fbf8a202c2ec527a73f1d 693 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 128 157 - T 23-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RR42_RS12765 ea63f289e51fbf8a202c2ec527a73f1d 693 Gene3D G3DSA:1.10.510.10 195 378 3.2E-38 T 23-04-2016 RR42_RS12765 ea63f289e51fbf8a202c2ec527a73f1d 693 PANTHER PTHR24362 114 387 1.6E-62 T 23-04-2016 RR42_RS12765 ea63f289e51fbf8a202c2ec527a73f1d 693 Pfam PF00069 Protein kinase domain 124 343 9.2E-41 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RR42_RS08855 fe2280efb1fb2c4e19416155b5a423de 66 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 24 58 3.4E-9 T 23-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 RR42_RS05795 d3ab1f1bd21f6ab42b6ca08c4f87d6e4 290 SUPERFAMILY SSF53187 11 287 4.71E-81 T 23-04-2016 RR42_RS05795 d3ab1f1bd21f6ab42b6ca08c4f87d6e4 290 Gene3D G3DSA:3.40.630.40 11 288 2.6E-89 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RR42_RS05795 d3ab1f1bd21f6ab42b6ca08c4f87d6e4 290 Pfam PF05013 N-formylglutamate amidohydrolase 23 258 7.1E-64 T 23-04-2016 IPR007709 N-formylglutamate amidohydrolase RR42_RS14780 0c73f2687c688220511db7be0da9efd5 342 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 27 340 33.804 T 23-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 RR42_RS14780 0c73f2687c688220511db7be0da9efd5 342 Pfam PF03193 Protein of unknown function, DUF258 82 239 5.7E-44 T 23-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 RR42_RS14780 0c73f2687c688220511db7be0da9efd5 342 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 62 237 2.3E-43 T 23-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 RR42_RS14780 0c73f2687c688220511db7be0da9efd5 342 Gene3D G3DSA:1.10.40.50 277 341 1.2E-21 T 23-04-2016 RR42_RS14780 0c73f2687c688220511db7be0da9efd5 342 Gene3D G3DSA:3.40.50.300 97 275 2.9E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14780 0c73f2687c688220511db7be0da9efd5 342 PANTHER PTHR32120:SF2 14 238 2.8E-87 T 23-04-2016 RR42_RS14780 0c73f2687c688220511db7be0da9efd5 342 PANTHER PTHR32120:SF2 260 341 2.8E-87 T 23-04-2016 RR42_RS14780 0c73f2687c688220511db7be0da9efd5 342 Gene3D G3DSA:2.40.50.140 30 79 5.1E-6 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS14780 0c73f2687c688220511db7be0da9efd5 342 SUPERFAMILY SSF52540 97 340 2.5E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14780 0c73f2687c688220511db7be0da9efd5 342 PANTHER PTHR32120 14 238 2.8E-87 T 23-04-2016 RR42_RS14780 0c73f2687c688220511db7be0da9efd5 342 PANTHER PTHR32120 260 341 2.8E-87 T 23-04-2016 RR42_RS07465 d1a24ce7d065f85c67ccafec364e5e12 344 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 298 318 - T 23-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 RR42_RS07465 d1a24ce7d065f85c67ccafec364e5e12 344 PIRSF PIRSF000164 18 344 1.0E-93 T 23-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 RR42_RS07465 d1a24ce7d065f85c67ccafec364e5e12 344 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 83 102 - T 23-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 RR42_RS07465 d1a24ce7d065f85c67ccafec364e5e12 344 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 6 342 9.7E-126 T 23-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RR42_RS07465 d1a24ce7d065f85c67ccafec364e5e12 344 Gene3D G3DSA:3.20.20.70 4 343 2.9E-123 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS07465 d1a24ce7d065f85c67ccafec364e5e12 344 SUPERFAMILY SSF51395 6 343 2.13E-101 T 23-04-2016 RR42_RS07465 d1a24ce7d065f85c67ccafec364e5e12 344 PANTHER PTHR11938 9 337 3.7E-82 T 23-04-2016 RR42_RS07465 d1a24ce7d065f85c67ccafec364e5e12 344 PANTHER PTHR11938:SF47 9 337 3.7E-82 T 23-04-2016 RR42_RS07465 d1a24ce7d065f85c67ccafec364e5e12 344 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 5 342 50.756 T 23-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RR42_RS07465 d1a24ce7d065f85c67ccafec364e5e12 344 Pfam PF01180 Dihydroorotate dehydrogenase 51 341 5.0E-85 T 23-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 RR42_RS02580 637834900c28f94e949dd2ffec126cb9 242 PANTHER PTHR30085 1 240 2.7E-122 T 23-04-2016 RR42_RS02580 637834900c28f94e949dd2ffec126cb9 242 SUPERFAMILY SSF161098 23 219 2.09E-41 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS02580 637834900c28f94e949dd2ffec126cb9 242 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 23 127 1.8E-19 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RR42_RS02580 637834900c28f94e949dd2ffec126cb9 242 Gene3D G3DSA:1.10.3720.10 22 233 2.2E-46 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS02580 637834900c28f94e949dd2ffec126cb9 242 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 234 3.6E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS02580 637834900c28f94e949dd2ffec126cb9 242 PANTHER PTHR30085:SF4 1 240 2.7E-122 T 23-04-2016 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ GO:0006865|GO:0016021|GO:0043190 RR42_RS05025 1cd2534b61137edbac6b8d2b7ab58924 317 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 292 8.7E-61 T 23-04-2016 IPR021134 Bestrophin/UPF0187 RR42_RS05025 1cd2534b61137edbac6b8d2b7ab58924 317 PANTHER PTHR33281:SF3 10 311 7.4E-73 T 23-04-2016 RR42_RS05025 1cd2534b61137edbac6b8d2b7ab58924 317 PANTHER PTHR33281 10 311 7.4E-73 T 23-04-2016 RR42_RS04795 d1fce9d419e964418531f9b2d0900e85 366 PANTHER PTHR32196:SF22 8 364 1.9E-64 T 23-04-2016 RR42_RS04795 d1fce9d419e964418531f9b2d0900e85 366 Pfam PF02653 Branched-chain amino acid transport system / permease component 69 349 1.8E-41 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RR42_RS04795 d1fce9d419e964418531f9b2d0900e85 366 PANTHER PTHR32196 8 364 1.9E-64 T 23-04-2016 RR42_RS03665 e31f851c3834d508999a2c3c3b5ff828 73 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 24.475 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RR42_RS03665 e31f851c3834d508999a2c3c3b5ff828 73 SUPERFAMILY SSF50249 1 71 1.11E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS03665 e31f851c3834d508999a2c3c3b5ff828 73 PANTHER PTHR33370 2 73 1.5E-32 T 23-04-2016 RR42_RS03665 e31f851c3834d508999a2c3c3b5ff828 73 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 2.5E-21 T 23-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 RR42_RS03665 e31f851c3834d508999a2c3c3b5ff828 73 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.5E-28 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RR42_RS03665 e31f851c3834d508999a2c3c3b5ff828 73 Gene3D G3DSA:2.40.50.140 2 72 2.7E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS14510 580c94a60c4dd15784c08b55e1c7b042 298 SUPERFAMILY SSF53335 54 293 2.02E-43 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS14510 580c94a60c4dd15784c08b55e1c7b042 298 Gene3D G3DSA:3.40.50.150 53 284 1.3E-50 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS14595 37c03a0574eec508a55fb7de1daa66f8 395 Gene3D G3DSA:3.90.1150.10 265 379 3.2E-10 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS14595 37c03a0574eec508a55fb7de1daa66f8 395 Pfam PF00155 Aminotransferase class I and II 49 374 5.7E-33 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RR42_RS14595 37c03a0574eec508a55fb7de1daa66f8 395 PANTHER PTHR11751 12 387 1.6E-125 T 23-04-2016 RR42_RS14595 37c03a0574eec508a55fb7de1daa66f8 395 SUPERFAMILY SSF53383 2 383 2.34E-104 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS14595 37c03a0574eec508a55fb7de1daa66f8 395 PANTHER PTHR11751:SF294 12 387 1.6E-125 T 23-04-2016 RR42_RS14595 37c03a0574eec508a55fb7de1daa66f8 395 Gene3D G3DSA:3.40.640.10 57 264 6.3E-72 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS07495 2478bf2545e9bf32893b7b15e4d060db 129 Pfam PF09722 Protein of unknown function (DUF2384) 80 127 1.3E-12 T 23-04-2016 IPR024467 Domain of unknown function DUF2384 RR42_RS07495 2478bf2545e9bf32893b7b15e4d060db 129 Gene3D G3DSA:1.10.260.40 13 57 3.7E-4 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS23825 86c742ce6994ad2979e3923ed44d94a6 164 SUPERFAMILY SSF56954 2 164 8.63E-32 T 23-04-2016 RR42_RS23825 86c742ce6994ad2979e3923ed44d94a6 164 PANTHER PTHR30203:SF5 2 164 5.2E-36 T 23-04-2016 RR42_RS23825 86c742ce6994ad2979e3923ed44d94a6 164 Gene3D G3DSA:1.20.1600.10 2 164 2.3E-32 T 23-04-2016 RR42_RS23825 86c742ce6994ad2979e3923ed44d94a6 164 Pfam PF02321 Outer membrane efflux protein 2 164 2.6E-16 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RR42_RS23825 86c742ce6994ad2979e3923ed44d94a6 164 PANTHER PTHR30203 2 164 5.2E-36 T 23-04-2016 RR42_RS05015 9796a839593bf3bd4fac5461eb5db8bb 188 Pfam PF07209 Protein of unknown function (DUF1415) 11 180 9.0E-72 T 23-04-2016 IPR009858 Protein of unknown function DUF1415 RR42_RS05035 3580cb010dc995428d4bda7532a5985b 167 Gene3D G3DSA:3.40.50.2300 42 162 5.7E-4 T 23-04-2016 RR42_RS05035 3580cb010dc995428d4bda7532a5985b 167 SUPERFAMILY SSF52172 42 161 5.73E-7 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS04040 8a03d80e5637eb248c202cd4825b30f3 95 Gene3D G3DSA:1.10.10.10 6 80 1.2E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS04040 8a03d80e5637eb248c202cd4825b30f3 95 Pfam PF12840 Helix-turn-helix domain 9 66 3.5E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS04040 8a03d80e5637eb248c202cd4825b30f3 95 SUPERFAMILY SSF46785 10 80 6.1E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS12670 a8472a019c58f592f31f0a4ac6a220c8 165 Pfam PF13279 Thioesterase-like superfamily 42 151 7.9E-6 T 23-04-2016 RR42_RS12670 a8472a019c58f592f31f0a4ac6a220c8 165 Gene3D G3DSA:3.10.129.10 28 158 1.4E-14 T 23-04-2016 IPR029069 HotDog domain RR42_RS12670 a8472a019c58f592f31f0a4ac6a220c8 165 SUPERFAMILY SSF54637 18 155 2.2E-19 T 23-04-2016 IPR029069 HotDog domain RR42_RS09870 252b507c53fa1af3a6452550956e3a60 440 PANTHER PTHR10859:SF92 51 399 4.5E-104 T 23-04-2016 RR42_RS09870 252b507c53fa1af3a6452550956e3a60 440 PANTHER PTHR10859 51 399 4.5E-104 T 23-04-2016 RR42_RS09870 252b507c53fa1af3a6452550956e3a60 440 Pfam PF13641 Glycosyltransferase like family 2 51 275 2.2E-33 T 23-04-2016 RR42_RS09870 252b507c53fa1af3a6452550956e3a60 440 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 8 412 1.4E-173 T 23-04-2016 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0042710 KEGG: 00051+2.4.1.-|KEGG: 00512+2.4.1.-|KEGG: 00513+2.4.1.-|KEGG: 00514+2.4.1.-|KEGG: 00522+2.4.1.-|KEGG: 00533+2.4.1.-|KEGG: 00540+2.4.1.-|KEGG: 00550+2.4.1.-|KEGG: 00561+2.4.1.-|KEGG: 00563+2.4.1.-|KEGG: 00600+2.4.1.-|KEGG: 00601+2.4.1.-|KEGG: 00603+2.4.1.-|KEGG: 00604+2.4.1.-|KEGG: 00906+2.4.1.-|KEGG: 00908+2.4.1.-|KEGG: 00941+2.4.1.-|KEGG: 00942+2.4.1.-|KEGG: 00944+2.4.1.-|KEGG: 00945+2.4.1.-|KEGG: 00965+2.4.1.- RR42_RS09870 252b507c53fa1af3a6452550956e3a60 440 Gene3D G3DSA:3.90.550.10 51 293 6.8E-41 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RR42_RS09870 252b507c53fa1af3a6452550956e3a60 440 SUPERFAMILY SSF53448 49 314 5.63E-58 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RR42_RS15530 573ca23acb2ca72badb19db5224a9fb6 310 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 4 28 2.5E-6 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS15530 573ca23acb2ca72badb19db5224a9fb6 310 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 1.4E-5 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS15530 573ca23acb2ca72badb19db5224a9fb6 310 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS15530 573ca23acb2ca72badb19db5224a9fb6 310 Pfam PF16074 Type IV Pilus-assembly protein W 162 301 4.6E-23 T 23-04-2016 IPR032092 Type IV Pilus-assembly protein W GO:0043683 RR42_RS08975 c4859508074cc27b4e7bcf82f73d7016 173 Gene3D G3DSA:3.40.50.300 64 165 1.3E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS08975 c4859508074cc27b4e7bcf82f73d7016 173 Gene3D G3DSA:3.40.50.300 1 43 4.2E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18980 5b7e5856ade4814961cad30eb86bfb08 178 Pfam PF00583 Acetyltransferase (GNAT) family 54 148 1.5E-6 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RR42_RS18980 5b7e5856ade4814961cad30eb86bfb08 178 Gene3D G3DSA:3.40.630.30 3 175 4.2E-16 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS18980 5b7e5856ade4814961cad30eb86bfb08 178 SUPERFAMILY SSF55729 7 151 2.13E-17 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS09225 807daf1070e5842842b1a732d6a1f9b8 521 Gene3D G3DSA:1.20.1250.20 484 511 2.3E-17 T 23-04-2016 RR42_RS09225 807daf1070e5842842b1a732d6a1f9b8 521 Gene3D G3DSA:1.20.1250.20 276 431 2.3E-17 T 23-04-2016 RR42_RS09225 807daf1070e5842842b1a732d6a1f9b8 521 Gene3D G3DSA:1.20.1250.20 25 203 9.0E-31 T 23-04-2016 RR42_RS09225 807daf1070e5842842b1a732d6a1f9b8 521 PANTHER PTHR23501:SF52 1 512 6.9E-205 T 23-04-2016 RR42_RS09225 807daf1070e5842842b1a732d6a1f9b8 521 Pfam PF07690 Major Facilitator Superfamily 27 420 4.2E-53 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS09225 807daf1070e5842842b1a732d6a1f9b8 521 SUPERFAMILY SSF103473 483 508 3.14E-62 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS09225 807daf1070e5842842b1a732d6a1f9b8 521 SUPERFAMILY SSF103473 259 430 3.14E-62 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS09225 807daf1070e5842842b1a732d6a1f9b8 521 SUPERFAMILY SSF103473 8 206 3.14E-62 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS09225 807daf1070e5842842b1a732d6a1f9b8 521 PANTHER PTHR23501 1 512 6.9E-205 T 23-04-2016 RR42_RS09225 807daf1070e5842842b1a732d6a1f9b8 521 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 22 506 3.5E-146 T 23-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RR42_RS20460 362237955ce793c28b9f9f951f2455de 213 PANTHER PTHR30086 2 210 8.4E-61 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RR42_RS20460 362237955ce793c28b9f9f951f2455de 213 PANTHER PTHR30086:SF2 2 210 8.4E-61 T 23-04-2016 RR42_RS20460 362237955ce793c28b9f9f951f2455de 213 Pfam PF01810 LysE type translocator 17 210 2.0E-38 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RR42_RS20460 362237955ce793c28b9f9f951f2455de 213 PIRSF PIRSF006324 1 213 1.3E-60 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RR42_RS04580 cfac38a29a3be663cfb58836abff4069 594 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 35 156 3.3E-15 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS04580 cfac38a29a3be663cfb58836abff4069 594 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 161 270 5.3E-15 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RR42_RS04580 cfac38a29a3be663cfb58836abff4069 594 PANTHER PTHR10909 3 474 2.0E-193 T 23-04-2016 RR42_RS04580 cfac38a29a3be663cfb58836abff4069 594 SUPERFAMILY SSF56645 34 279 2.09E-60 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RR42_RS04580 cfac38a29a3be663cfb58836abff4069 594 PANTHER PTHR10909:SF296 3 474 2.0E-193 T 23-04-2016 RR42_RS04580 cfac38a29a3be663cfb58836abff4069 594 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 2 33 8.0E-14 T 23-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria RR42_RS04580 cfac38a29a3be663cfb58836abff4069 594 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 467 588 9.4E-28 T 23-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RR42_RS04580 cfac38a29a3be663cfb58836abff4069 594 Gene3D G3DSA:1.10.540.10 33 157 2.7E-21 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS04580 cfac38a29a3be663cfb58836abff4069 594 Gene3D G3DSA:1.20.140.10 271 457 7.7E-52 T 23-04-2016 RR42_RS04580 cfac38a29a3be663cfb58836abff4069 594 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 449 8.5E-25 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS04580 cfac38a29a3be663cfb58836abff4069 594 Gene3D G3DSA:2.40.110.10 160 270 1.4E-25 T 23-04-2016 RR42_RS04580 cfac38a29a3be663cfb58836abff4069 594 SUPERFAMILY SSF47203 281 456 4.35E-43 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS02115 707253ab7e182bb5b360c6fd1d198326 127 Pfam PF13467 Ribbon-helix-helix domain 16 83 9.3E-27 T 23-04-2016 IPR027373 Ribbon-helix-helix domain RR42_RS19745 3ea8645bed7e6652211b34e5bbccbbc7 282 PANTHER PTHR34183 127 229 3.0E-49 T 23-04-2016 RR42_RS19745 3ea8645bed7e6652211b34e5bbccbbc7 282 SUPERFAMILY SSF50685 136 222 1.05E-10 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RR42_RS19745 3ea8645bed7e6652211b34e5bbccbbc7 282 Pfam PF03330 Lytic transglycolase 133 221 1.1E-24 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RR42_RS19745 3ea8645bed7e6652211b34e5bbccbbc7 282 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 135 229 2.9E-39 T 23-04-2016 IPR012997 Rare lipoprotein A RR42_RS19745 3ea8645bed7e6652211b34e5bbccbbc7 282 PANTHER PTHR34183:SF1 127 229 3.0E-49 T 23-04-2016 RR42_RS09375 c1d7023f223cfca6b65ffc75a5adbee3 282 Gene3D G3DSA:3.60.130.10 1 280 4.5E-86 T 23-04-2016 RR42_RS09375 c1d7023f223cfca6b65ffc75a5adbee3 282 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 3 274 3.6E-57 T 23-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 RR42_RS09375 c1d7023f223cfca6b65ffc75a5adbee3 282 PANTHER PTHR30468 1 279 1.9E-65 T 23-04-2016 RR42_RS09375 c1d7023f223cfca6b65ffc75a5adbee3 282 SUPERFAMILY SSF51197 1 280 3.53E-84 T 23-04-2016 RR42_RS09375 c1d7023f223cfca6b65ffc75a5adbee3 282 PANTHER PTHR30468:SF5 1 279 1.9E-65 T 23-04-2016 RR42_RS20225 8e6573c259cf0a0bccf6d337ee1863a6 331 SUPERFAMILY SSF53850 120 294 3.53E-12 T 23-04-2016 RR42_RS20225 8e6573c259cf0a0bccf6d337ee1863a6 331 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 55 327 2.6E-83 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS20225 8e6573c259cf0a0bccf6d337ee1863a6 331 PIRSF PIRSF017082 2 330 2.9E-81 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS20225 8e6573c259cf0a0bccf6d337ee1863a6 331 PANTHER PTHR30349 1 328 2.8E-88 T 23-04-2016 RR42_RS20225 8e6573c259cf0a0bccf6d337ee1863a6 331 PANTHER PTHR30349:SF16 1 328 2.8E-88 T 23-04-2016 RR42_RS20540 3b883fae7291ceb963b7306ed0dda020 391 PANTHER PTHR23501 1 375 4.4E-76 T 23-04-2016 RR42_RS20540 3b883fae7291ceb963b7306ed0dda020 391 Gene3D G3DSA:1.20.1250.20 3 181 3.2E-26 T 23-04-2016 RR42_RS20540 3b883fae7291ceb963b7306ed0dda020 391 Gene3D G3DSA:1.20.1250.20 198 373 4.5E-14 T 23-04-2016 RR42_RS20540 3b883fae7291ceb963b7306ed0dda020 391 Pfam PF07690 Major Facilitator Superfamily 8 341 1.8E-35 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS20540 3b883fae7291ceb963b7306ed0dda020 391 PANTHER PTHR23501:SF88 1 375 4.4E-76 T 23-04-2016 RR42_RS20540 3b883fae7291ceb963b7306ed0dda020 391 SUPERFAMILY SSF103473 5 381 1.7E-57 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS02230 5fa0fbf16c81803770c7e2c6cefd2e4e 334 Pfam PF02615 Malate/L-lactate dehydrogenase 5 328 6.7E-105 T 23-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 RR42_RS02230 5fa0fbf16c81803770c7e2c6cefd2e4e 334 PANTHER PTHR11091 1 334 5.2E-81 T 23-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 RR42_RS02230 5fa0fbf16c81803770c7e2c6cefd2e4e 334 Gene3D G3DSA:3.30.1370.60 73 273 2.2E-74 T 23-04-2016 RR42_RS02230 5fa0fbf16c81803770c7e2c6cefd2e4e 334 SUPERFAMILY SSF89733 2 333 5.1E-99 T 23-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 RR42_RS02230 5fa0fbf16c81803770c7e2c6cefd2e4e 334 Gene3D G3DSA:1.10.1530.10 4 72 1.9E-22 T 23-04-2016 RR42_RS04540 ae4020223bb7c59968c9dabd410e22f4 368 PANTHER PTHR30163 49 368 1.5E-102 T 23-04-2016 IPR011757 Lytic transglycosylase MltB RR42_RS04540 ae4020223bb7c59968c9dabd410e22f4 368 Gene3D G3DSA:1.10.530.10 243 366 2.9E-51 T 23-04-2016 RR42_RS04540 ae4020223bb7c59968c9dabd410e22f4 368 Gene3D G3DSA:1.10.530.10 101 155 2.9E-51 T 23-04-2016 RR42_RS04540 ae4020223bb7c59968c9dabd410e22f4 368 PANTHER PTHR30163:SF0 49 368 1.5E-102 T 23-04-2016 RR42_RS04540 ae4020223bb7c59968c9dabd410e22f4 368 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 58 363 5.4E-112 T 23-04-2016 IPR011757 Lytic transglycosylase MltB RR42_RS04540 ae4020223bb7c59968c9dabd410e22f4 368 SUPERFAMILY SSF53955 51 366 3.56E-80 T 23-04-2016 IPR023346 Lysozyme-like domain RR42_RS04540 ae4020223bb7c59968c9dabd410e22f4 368 Pfam PF13406 Transglycosylase SLT domain 56 360 7.6E-87 T 23-04-2016 IPR031304 Transglycosylase SLT domain 2 RR42_RS14115 f94571d0ccbee6bf12339d38a2356e44 358 PANTHER PTHR30100:SF1 1 341 5.5E-135 T 23-04-2016 RR42_RS14115 f94571d0ccbee6bf12339d38a2356e44 358 PIRSF PIRSF002465 1 338 2.0E-128 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 RR42_RS14115 f94571d0ccbee6bf12339d38a2356e44 358 PANTHER PTHR30100 1 341 5.5E-135 T 23-04-2016 RR42_RS14115 f94571d0ccbee6bf12339d38a2356e44 358 SUPERFAMILY SSF53659 3 333 1.89E-103 T 23-04-2016 RR42_RS14115 f94571d0ccbee6bf12339d38a2356e44 358 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 339 156.399 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 RR42_RS14115 f94571d0ccbee6bf12339d38a2356e44 358 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 3 333 2.8E-113 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 RR42_RS14115 f94571d0ccbee6bf12339d38a2356e44 358 Pfam PF02504 Fatty acid synthesis protein 3 326 7.9E-110 T 23-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 RR42_RS14115 f94571d0ccbee6bf12339d38a2356e44 358 Gene3D G3DSA:3.40.718.10 2 332 2.4E-134 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RR42_RS15565 6a8cf13a3d4851c15a77aa85dffe3a21 370 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 2.5E-82 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RR42_RS15565 6a8cf13a3d4851c15a77aa85dffe3a21 370 PANTHER PTHR21327 1 364 1.2E-138 T 23-04-2016 RR42_RS15565 6a8cf13a3d4851c15a77aa85dffe3a21 370 PIRSF PIRSF001259 1 370 1.6E-116 T 23-04-2016 RR42_RS15565 6a8cf13a3d4851c15a77aa85dffe3a21 370 SUPERFAMILY SSF142695 204 364 1.31E-46 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 RR42_RS15565 6a8cf13a3d4851c15a77aa85dffe3a21 370 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.481 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RR42_RS15565 6a8cf13a3d4851c15a77aa85dffe3a21 370 SUPERFAMILY SSF55821 2 202 1.99E-85 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RR42_RS15565 6a8cf13a3d4851c15a77aa85dffe3a21 370 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 4 199 1.4E-72 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RR42_RS15565 6a8cf13a3d4851c15a77aa85dffe3a21 370 PANTHER PTHR21327:SF6 1 364 1.2E-138 T 23-04-2016 RR42_RS15565 6a8cf13a3d4851c15a77aa85dffe3a21 370 Gene3D G3DSA:3.90.870.10 2 210 2.3E-97 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RR42_RS15565 6a8cf13a3d4851c15a77aa85dffe3a21 370 Pfam PF00925 GTP cyclohydrolase II 208 361 6.9E-34 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 RR42_RS10320 a66c264aeb1ee6152d079a8d6f5dddb3 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RR42_RS10320 a66c264aeb1ee6152d079a8d6f5dddb3 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.0E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10320 a66c264aeb1ee6152d079a8d6f5dddb3 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.0E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10320 a66c264aeb1ee6152d079a8d6f5dddb3 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.0E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10320 a66c264aeb1ee6152d079a8d6f5dddb3 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 251 1.0E-58 T 23-04-2016 RR42_RS10320 a66c264aeb1ee6152d079a8d6f5dddb3 255 SUPERFAMILY SSF51735 5 253 9.72E-76 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10320 a66c264aeb1ee6152d079a8d6f5dddb3 255 PANTHER PTHR24322 155 186 3.3E-52 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10320 a66c264aeb1ee6152d079a8d6f5dddb3 255 PANTHER PTHR24322 10 139 3.3E-52 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10320 a66c264aeb1ee6152d079a8d6f5dddb3 255 Gene3D G3DSA:3.40.50.720 2 253 2.8E-78 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10320 a66c264aeb1ee6152d079a8d6f5dddb3 255 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 171 7.5E-4 T 23-04-2016 RR42_RS10320 a66c264aeb1ee6152d079a8d6f5dddb3 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.5E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10320 a66c264aeb1ee6152d079a8d6f5dddb3 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 3.5E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10320 a66c264aeb1ee6152d079a8d6f5dddb3 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.5E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10320 a66c264aeb1ee6152d079a8d6f5dddb3 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.5E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10320 a66c264aeb1ee6152d079a8d6f5dddb3 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.5E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10320 a66c264aeb1ee6152d079a8d6f5dddb3 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.5E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS14250 f37718a6955467e4ca1cf5941e070ab7 398 Pfam PF07993 Male sterility protein 33 267 7.9E-24 T 23-04-2016 IPR013120 Male sterility, NAD-binding Reactome: REACT_22258 RR42_RS14250 f37718a6955467e4ca1cf5941e070ab7 398 PANTHER PTHR10366 30 316 1.2E-49 T 23-04-2016 RR42_RS14250 f37718a6955467e4ca1cf5941e070ab7 398 PANTHER PTHR10366 344 380 1.2E-49 T 23-04-2016 RR42_RS14250 f37718a6955467e4ca1cf5941e070ab7 398 PANTHER PTHR10366:SF382 30 316 1.2E-49 T 23-04-2016 RR42_RS14250 f37718a6955467e4ca1cf5941e070ab7 398 PANTHER PTHR10366:SF382 344 380 1.2E-49 T 23-04-2016 RR42_RS14250 f37718a6955467e4ca1cf5941e070ab7 398 Gene3D G3DSA:3.40.50.720 32 321 1.7E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS14250 f37718a6955467e4ca1cf5941e070ab7 398 Gene3D G3DSA:3.40.50.720 353 378 1.7E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS14250 f37718a6955467e4ca1cf5941e070ab7 398 SUPERFAMILY SSF51735 354 386 1.56E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS14250 f37718a6955467e4ca1cf5941e070ab7 398 SUPERFAMILY SSF51735 31 322 1.56E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS17685 67adc3e2599a64358987520cc8e0b16c 182 Gene3D G3DSA:3.40.30.10 12 178 2.6E-42 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS17685 67adc3e2599a64358987520cc8e0b16c 182 Pfam PF00578 AhpC/TSA family 52 164 1.2E-21 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 RR42_RS17685 67adc3e2599a64358987520cc8e0b16c 182 PANTHER PTHR10681:SF125 54 170 1.3E-20 T 23-04-2016 RR42_RS17685 67adc3e2599a64358987520cc8e0b16c 182 ProSitePatterns PS00194 Thioredoxin family active site. 73 91 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RR42_RS17685 67adc3e2599a64358987520cc8e0b16c 182 SUPERFAMILY SSF52833 14 176 1.14E-35 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS17685 67adc3e2599a64358987520cc8e0b16c 182 PANTHER PTHR10681 54 170 1.3E-20 T 23-04-2016 RR42_RS15780 9ffa08f5a40aafc1a2868895f62d55ee 186 SUPERFAMILY SSF55729 5 163 8.35E-31 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS15780 9ffa08f5a40aafc1a2868895f62d55ee 186 Pfam PF13302 Acetyltransferase (GNAT) domain 8 141 3.8E-13 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RR42_RS15780 9ffa08f5a40aafc1a2868895f62d55ee 186 PANTHER PTHR13256 8 160 2.4E-20 T 23-04-2016 RR42_RS15780 9ffa08f5a40aafc1a2868895f62d55ee 186 Gene3D G3DSA:3.40.630.30 5 169 2.8E-33 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS15780 9ffa08f5a40aafc1a2868895f62d55ee 186 TIGRFAM TIGR03585 PseH: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase 9 162 1.7E-35 T 23-04-2016 IPR020036 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase RR42_RS15780 9ffa08f5a40aafc1a2868895f62d55ee 186 PANTHER PTHR13256:SF39 8 160 2.4E-20 T 23-04-2016 RR42_RS01915 fa52c4f02ed1bde222211fd81b6f3db6 367 PANTHER PTHR35457:SF1 253 365 2.0E-57 T 23-04-2016 RR42_RS01915 fa52c4f02ed1bde222211fd81b6f3db6 367 PANTHER PTHR35457:SF1 86 233 2.0E-57 T 23-04-2016 RR42_RS01915 fa52c4f02ed1bde222211fd81b6f3db6 367 PANTHER PTHR35457:SF1 2 70 2.0E-57 T 23-04-2016 RR42_RS01915 fa52c4f02ed1bde222211fd81b6f3db6 367 Pfam PF02628 Cytochrome oxidase assembly protein 31 341 3.2E-84 T 23-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 RR42_RS01915 fa52c4f02ed1bde222211fd81b6f3db6 367 PANTHER PTHR35457 253 365 2.0E-57 T 23-04-2016 RR42_RS01915 fa52c4f02ed1bde222211fd81b6f3db6 367 PANTHER PTHR35457 86 233 2.0E-57 T 23-04-2016 RR42_RS01915 fa52c4f02ed1bde222211fd81b6f3db6 367 PANTHER PTHR35457 2 70 2.0E-57 T 23-04-2016 RR42_RS10765 296cbaff9eb3fedb6e3bf05dba6e540e 261 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 126 136 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 RR42_RS10765 296cbaff9eb3fedb6e3bf05dba6e540e 261 Pfam PF01026 TatD related DNase 4 258 5.1E-66 T 23-04-2016 IPR001130 TatD family GO:0016788 RR42_RS10765 296cbaff9eb3fedb6e3bf05dba6e540e 261 PANTHER PTHR10060 1 261 5.3E-102 T 23-04-2016 IPR001130 TatD family GO:0016788 RR42_RS10765 296cbaff9eb3fedb6e3bf05dba6e540e 261 SUPERFAMILY SSF51556 3 259 1.76E-78 T 23-04-2016 IPR032466 Metal-dependent hydrolase RR42_RS10765 296cbaff9eb3fedb6e3bf05dba6e540e 261 PIRSF PIRSF005902 1 261 4.6E-74 T 23-04-2016 IPR001130 TatD family GO:0016788 RR42_RS10765 296cbaff9eb3fedb6e3bf05dba6e540e 261 Gene3D G3DSA:3.20.20.140 1 259 1.2E-86 T 23-04-2016 RR42_RS07325 4e2782d64f6499e3fc4fa1f3aa5bccbf 265 PANTHER PTHR22748:SF7 1 264 3.7E-100 T 23-04-2016 RR42_RS07325 4e2782d64f6499e3fc4fa1f3aa5bccbf 265 SUPERFAMILY SSF56219 1 264 1.96E-75 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RR42_RS07325 4e2782d64f6499e3fc4fa1f3aa5bccbf 265 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 262 9.4E-74 T 23-04-2016 RR42_RS07325 4e2782d64f6499e3fc4fa1f3aa5bccbf 265 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 255 1.3E-25 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RR42_RS07325 4e2782d64f6499e3fc4fa1f3aa5bccbf 265 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 219 230 - T 23-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 RR42_RS07325 4e2782d64f6499e3fc4fa1f3aa5bccbf 265 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 263 5.0E-70 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RR42_RS07325 4e2782d64f6499e3fc4fa1f3aa5bccbf 265 Gene3D G3DSA:3.60.10.10 1 263 1.6E-79 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RR42_RS07325 4e2782d64f6499e3fc4fa1f3aa5bccbf 265 PANTHER PTHR22748 1 264 3.7E-100 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RR42_RS07710 95ebb1eb2c7a685e311522e0db2598fd 232 PANTHER PTHR14119:SF1 1 205 6.0E-109 T 23-04-2016 RR42_RS07710 95ebb1eb2c7a685e311522e0db2598fd 232 Gene3D G3DSA:3.40.50.850 7 209 4.1E-46 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RR42_RS07710 95ebb1eb2c7a685e311522e0db2598fd 232 PANTHER PTHR14119 1 205 6.0E-109 T 23-04-2016 RR42_RS07710 95ebb1eb2c7a685e311522e0db2598fd 232 SUPERFAMILY SSF52499 5 207 2.62E-45 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RR42_RS07710 95ebb1eb2c7a685e311522e0db2598fd 232 Pfam PF00857 Isochorismatase family 15 168 1.9E-27 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RR42_RS15145 22fd630da4543ddecdf5a121db7c5dae 253 SMART SM00244 20 177 2.4E-61 T 23-04-2016 IPR001107 Band 7 domain RR42_RS15145 22fd630da4543ddecdf5a121db7c5dae 253 PRINTS PR00721 Stomatin signature 74 95 7.8E-63 T 23-04-2016 IPR001972 Stomatin family GO:0016020 RR42_RS15145 22fd630da4543ddecdf5a121db7c5dae 253 PRINTS PR00721 Stomatin signature 109 126 7.8E-63 T 23-04-2016 IPR001972 Stomatin family GO:0016020 RR42_RS15145 22fd630da4543ddecdf5a121db7c5dae 253 PRINTS PR00721 Stomatin signature 27 49 7.8E-63 T 23-04-2016 IPR001972 Stomatin family GO:0016020 RR42_RS15145 22fd630da4543ddecdf5a121db7c5dae 253 PRINTS PR00721 Stomatin signature 197 220 7.8E-63 T 23-04-2016 IPR001972 Stomatin family GO:0016020 RR42_RS15145 22fd630da4543ddecdf5a121db7c5dae 253 PRINTS PR00721 Stomatin signature 172 193 7.8E-63 T 23-04-2016 IPR001972 Stomatin family GO:0016020 RR42_RS15145 22fd630da4543ddecdf5a121db7c5dae 253 PRINTS PR00721 Stomatin signature 129 152 7.8E-63 T 23-04-2016 IPR001972 Stomatin family GO:0016020 RR42_RS15145 22fd630da4543ddecdf5a121db7c5dae 253 PRINTS PR00721 Stomatin signature 153 171 7.8E-63 T 23-04-2016 IPR001972 Stomatin family GO:0016020 RR42_RS15145 22fd630da4543ddecdf5a121db7c5dae 253 PANTHER PTHR10264 7 245 7.9E-109 T 23-04-2016 IPR001972 Stomatin family GO:0016020 RR42_RS15145 22fd630da4543ddecdf5a121db7c5dae 253 SUPERFAMILY SSF117892 51 184 5.23E-43 T 23-04-2016 IPR001107 Band 7 domain RR42_RS15145 22fd630da4543ddecdf5a121db7c5dae 253 Pfam PF01145 SPFH domain / Band 7 family 25 193 6.9E-35 T 23-04-2016 IPR001107 Band 7 domain RR42_RS15145 22fd630da4543ddecdf5a121db7c5dae 253 PANTHER PTHR10264:SF60 7 245 7.9E-109 T 23-04-2016 RR42_RS06080 dcaf773f23d1bc1b7f82045892f60ba0 300 Gene3D G3DSA:1.20.58.410 2 51 1.2E-6 T 23-04-2016 RR42_RS06080 dcaf773f23d1bc1b7f82045892f60ba0 300 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 5 298 3.7E-139 T 23-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 RR42_RS06080 dcaf773f23d1bc1b7f82045892f60ba0 300 SUPERFAMILY SSF75620 2 297 1.31E-121 T 23-04-2016 RR42_RS06080 dcaf773f23d1bc1b7f82045892f60ba0 300 PANTHER PTHR11075:SF6 5 298 1.3E-143 T 23-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 RR42_RS06080 dcaf773f23d1bc1b7f82045892f60ba0 300 SMART SM00937 20 130 2.0E-53 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RR42_RS06080 dcaf773f23d1bc1b7f82045892f60ba0 300 Pfam PF00472 RF-1 domain 165 272 4.7E-40 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RR42_RS06080 dcaf773f23d1bc1b7f82045892f60ba0 300 Pfam PF03462 PCRF domain 6 155 2.1E-44 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RR42_RS06080 dcaf773f23d1bc1b7f82045892f60ba0 300 PANTHER PTHR11075 5 298 1.3E-143 T 23-04-2016 RR42_RS06080 dcaf773f23d1bc1b7f82045892f60ba0 300 Gene3D G3DSA:3.30.160.20 163 241 2.0E-38 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain RR42_RS06080 dcaf773f23d1bc1b7f82045892f60ba0 300 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 180 196 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RR42_RS08255 45cb6523254b2125dec4b83c79fb3c3c 136 Pfam PF12949 HeH/LEM domain 101 131 3.5E-8 T 23-04-2016 IPR025856 HeH/LEM domain RR42_RS08255 45cb6523254b2125dec4b83c79fb3c3c 136 SUPERFAMILY SSF68912 103 133 1.92E-5 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RR42_RS00875 c06039ae4eddb3a9cffc287d70c9271c 614 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 16 583 6.9E-247 T 23-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 RR42_RS00875 c06039ae4eddb3a9cffc287d70c9271c 614 PANTHER PTHR39559 7 594 9.0E-147 T 23-04-2016 RR42_RS00875 c06039ae4eddb3a9cffc287d70c9271c 614 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 8 588 43.427 T 23-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 RR42_RS00875 c06039ae4eddb3a9cffc287d70c9271c 614 PIRSF PIRSF000719 7 593 1.3E-268 T 23-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 RR42_RS00875 c06039ae4eddb3a9cffc287d70c9271c 614 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 16 591 0.0 T 23-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 RR42_RS20770 6fca18c2e407eb270deaa9cf598dd884 192 Pfam PF12869 tRNA_anti-like 1 185 4.6E-32 T 23-04-2016 IPR024422 Protein of unknown function, OB-fold-containing RR42_RS10020 736aa1a1f92df66a7182e8ba09541393 112 SUPERFAMILY SSF54909 1 106 6.31E-31 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RR42_RS10020 736aa1a1f92df66a7182e8ba09541393 112 Pfam PF09448 Methylmuconolactone methyl-isomerase 1 105 2.8E-41 T 23-04-2016 IPR018566 4-Methylmuconolactone methyl-isomerase RR42_RS10020 736aa1a1f92df66a7182e8ba09541393 112 Gene3D G3DSA:3.30.70.100 1 104 4.3E-50 T 23-04-2016 RR42_RS19230 dafd9bbdbe18caf753e425ce64f93f3f 109 SUPERFAMILY SSF54843 1 108 8.5E-41 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RR42_RS19230 dafd9bbdbe18caf753e425ce64f93f3f 109 Pfam PF00237 Ribosomal protein L22p/L17e 9 107 1.2E-32 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RR42_RS19230 dafd9bbdbe18caf753e425ce64f93f3f 109 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 109 24.701 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 RR42_RS19230 dafd9bbdbe18caf753e425ce64f93f3f 109 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 106 4.5E-43 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 RR42_RS19230 dafd9bbdbe18caf753e425ce64f93f3f 109 PANTHER PTHR13501 1 107 6.0E-47 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 RR42_RS19230 dafd9bbdbe18caf753e425ce64f93f3f 109 Gene3D G3DSA:3.90.470.10 1 108 1.1E-41 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RR42_RS19230 dafd9bbdbe18caf753e425ce64f93f3f 109 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 23-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS16960 00b27d45ec05db86a89f1173a1cd47d6 238 SMART SM00382 30 217 7.3E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS16960 00b27d45ec05db86a89f1173a1cd47d6 238 PIRSF PIRSF039137 1 238 5.2E-108 T 23-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 RR42_RS16960 00b27d45ec05db86a89f1173a1cd47d6 238 Pfam PF00005 ABC transporter 22 166 1.5E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS16960 00b27d45ec05db86a89f1173a1cd47d6 238 SUPERFAMILY SSF52540 4 236 5.44E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS16960 00b27d45ec05db86a89f1173a1cd47d6 238 PANTHER PTHR24220 7 238 2.9E-120 T 23-04-2016 RR42_RS16960 00b27d45ec05db86a89f1173a1cd47d6 238 Gene3D G3DSA:3.40.50.300 2 235 3.2E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS16960 00b27d45ec05db86a89f1173a1cd47d6 238 PANTHER PTHR24220:SF568 7 238 2.9E-120 T 23-04-2016 RR42_RS16960 00b27d45ec05db86a89f1173a1cd47d6 238 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS12600 f51a274871879864e1afb68b75a39ba5 99 SUPERFAMILY SSF50249 1 97 1.37E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS12600 f51a274871879864e1afb68b75a39ba5 99 Gene3D G3DSA:2.40.50.140 1 98 2.4E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS12600 f51a274871879864e1afb68b75a39ba5 99 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 2 94 1.6E-29 T 23-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 RR42_RS10345 e80d6e47b9f29540a976afb6a48943b8 356 SMART SM00839 152 355 3.4E-46 T 23-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 RR42_RS10345 e80d6e47b9f29540a976afb6a48943b8 356 PIRSF PIRSF000188 10 356 8.6E-125 T 23-04-2016 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 RR42_RS10345 e80d6e47b9f29540a976afb6a48943b8 356 SUPERFAMILY SSF53223 15 148 7.36E-40 T 23-04-2016 RR42_RS10345 e80d6e47b9f29540a976afb6a48943b8 356 Gene3D G3DSA:3.40.50.720 156 344 7.2E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10345 e80d6e47b9f29540a976afb6a48943b8 356 PANTHER PTHR11606:SF3 32 332 5.2E-99 T 23-04-2016 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 RR42_RS10345 e80d6e47b9f29540a976afb6a48943b8 356 Gene3D G3DSA:3.40.192.10 17 155 1.0E-53 T 23-04-2016 RR42_RS10345 e80d6e47b9f29540a976afb6a48943b8 356 PANTHER PTHR11606 32 332 5.2E-99 T 23-04-2016 RR42_RS10345 e80d6e47b9f29540a976afb6a48943b8 356 SUPERFAMILY SSF51735 150 352 3.47E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10345 e80d6e47b9f29540a976afb6a48943b8 356 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 233 318 7.4E-11 T 23-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 RR42_RS10345 e80d6e47b9f29540a976afb6a48943b8 356 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 30 130 1.9E-22 T 23-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 RR42_RS10345 e80d6e47b9f29540a976afb6a48943b8 356 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 74 88 7.5E-16 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RR42_RS10345 e80d6e47b9f29540a976afb6a48943b8 356 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 294 305 7.5E-16 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RR42_RS10345 e80d6e47b9f29540a976afb6a48943b8 356 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 184 204 7.5E-16 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RR42_RS10345 e80d6e47b9f29540a976afb6a48943b8 356 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 140 162 7.5E-16 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RR42_RS01255 f596b51791b14a87421edadec4188ac8 297 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 4 287 1.1E-57 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RR42_RS01255 f596b51791b14a87421edadec4188ac8 297 PIRSF PIRSF026649 1 297 2.2E-76 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RR42_RS01255 f596b51791b14a87421edadec4188ac8 297 PANTHER PTHR30606:SF5 6 297 1.3E-72 T 23-04-2016 RR42_RS01255 f596b51791b14a87421edadec4188ac8 297 PANTHER PTHR30606 6 297 1.3E-72 T 23-04-2016 RR42_RS01430 d9030cab422398b3d79dbff7e079bd53 399 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 98 325 6.2E-51 T 23-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA RR42_RS01430 d9030cab422398b3d79dbff7e079bd53 399 PANTHER PTHR12049 27 380 7.3E-49 T 23-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA RR42_RS01430 d9030cab422398b3d79dbff7e079bd53 399 SUPERFAMILY SSF53335 24 382 1.03E-88 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS16350 de9ba1076b51651add574f794accd39f 70 SUPERFAMILY SSF143011 7 52 1.73E-12 T 23-04-2016 RR42_RS16350 de9ba1076b51651add574f794accd39f 70 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 51 1.4E-10 T 23-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family RR42_RS16350 de9ba1076b51651add574f794accd39f 70 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 4 52 4.0E-14 T 23-04-2016 IPR004386 Toxin-antitoxin system, YafQ-like toxin RR42_RS14760 a34a3d46f464e29f83a1166de6c9990d 216 PANTHER PTHR10192 13 211 1.0E-72 T 23-04-2016 RR42_RS14760 a34a3d46f464e29f83a1166de6c9990d 216 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 22 166 1.1E-33 T 23-04-2016 IPR001453 MoaB/Mog domain RR42_RS14760 a34a3d46f464e29f83a1166de6c9990d 216 Gene3D G3DSA:3.40.980.10 22 209 2.1E-47 T 23-04-2016 IPR001453 MoaB/Mog domain RR42_RS14760 a34a3d46f464e29f83a1166de6c9990d 216 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 85 98 - T 23-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 RR42_RS14760 a34a3d46f464e29f83a1166de6c9990d 216 SUPERFAMILY SSF53218 21 208 1.24E-43 T 23-04-2016 IPR001453 MoaB/Mog domain RR42_RS14760 a34a3d46f464e29f83a1166de6c9990d 216 SMART SM00852 23 173 1.3E-20 T 23-04-2016 IPR001453 MoaB/Mog domain RR42_RS14760 a34a3d46f464e29f83a1166de6c9990d 216 Pfam PF00994 Probable molybdopterin binding domain 24 166 1.6E-27 T 23-04-2016 IPR001453 MoaB/Mog domain RR42_RS02540 19306e09aa2bebdbc5f00d506c184f7d 336 PANTHER PTHR31528 17 336 1.4E-59 T 23-04-2016 IPR027939 NMT1/THI5 family GO:0009228 UniPathway: UPA00060 RR42_RS02540 19306e09aa2bebdbc5f00d506c184f7d 336 SUPERFAMILY SSF53850 20 259 1.09E-36 T 23-04-2016 RR42_RS02540 19306e09aa2bebdbc5f00d506c184f7d 336 Pfam PF09084 NMT1/THI5 like 36 251 2.2E-40 T 23-04-2016 IPR015168 SsuA/THI5-like RR42_RS02540 19306e09aa2bebdbc5f00d506c184f7d 336 Gene3D G3DSA:3.40.190.10 109 237 7.8E-15 T 23-04-2016 RR42_RS03885 0564e12627f2c21e8fcbce0bd7522f3b 543 Pfam PF02470 MlaD protein 54 145 2.9E-12 T 23-04-2016 IPR003399 Mce/MlaD RR42_RS03885 0564e12627f2c21e8fcbce0bd7522f3b 543 Pfam PF02470 MlaD protein 169 229 1.3E-9 T 23-04-2016 IPR003399 Mce/MlaD RR42_RS03885 0564e12627f2c21e8fcbce0bd7522f3b 543 Pfam PF02470 MlaD protein 302 400 8.7E-18 T 23-04-2016 IPR003399 Mce/MlaD RR42_RS03885 0564e12627f2c21e8fcbce0bd7522f3b 543 PANTHER PTHR30462 29 473 9.9E-94 T 23-04-2016 RR42_RS03885 0564e12627f2c21e8fcbce0bd7522f3b 543 PANTHER PTHR30462:SF2 29 473 9.9E-94 T 23-04-2016 RR42_RS02405 de110b4c44caa77834aa0d5e535e652b 333 PANTHER PTHR41542:SF1 173 332 1.3E-28 T 23-04-2016 RR42_RS02405 de110b4c44caa77834aa0d5e535e652b 333 PANTHER PTHR41542:SF1 4 153 1.3E-28 T 23-04-2016 RR42_RS02405 de110b4c44caa77834aa0d5e535e652b 333 Pfam PF04280 Tim44-like domain 202 331 1.3E-16 T 23-04-2016 IPR007379 Tim44-like domain RR42_RS02405 de110b4c44caa77834aa0d5e535e652b 333 SUPERFAMILY SSF54427 202 332 1.93E-11 T 23-04-2016 IPR032710 NTF2-like domain RR42_RS02405 de110b4c44caa77834aa0d5e535e652b 333 PANTHER PTHR41542 173 332 1.3E-28 T 23-04-2016 RR42_RS02405 de110b4c44caa77834aa0d5e535e652b 333 PANTHER PTHR41542 4 153 1.3E-28 T 23-04-2016 RR42_RS02405 de110b4c44caa77834aa0d5e535e652b 333 SMART SM00978 200 331 2.1E-48 T 23-04-2016 IPR007379 Tim44-like domain RR42_RS06575 e4bec1d241c5365274b6d64d030a7494 295 Pfam PF12697 Alpha/beta hydrolase family 37 285 1.3E-16 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS06575 e4bec1d241c5365274b6d64d030a7494 295 PANTHER PTHR10992:SF771 21 168 2.1E-29 T 23-04-2016 RR42_RS06575 e4bec1d241c5365274b6d64d030a7494 295 PANTHER PTHR10992:SF771 214 294 2.1E-29 T 23-04-2016 RR42_RS06575 e4bec1d241c5365274b6d64d030a7494 295 PANTHER PTHR10992 21 168 2.1E-29 T 23-04-2016 RR42_RS06575 e4bec1d241c5365274b6d64d030a7494 295 PANTHER PTHR10992 214 294 2.1E-29 T 23-04-2016 RR42_RS06575 e4bec1d241c5365274b6d64d030a7494 295 Gene3D G3DSA:3.40.50.1820 20 291 2.4E-72 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS06575 e4bec1d241c5365274b6d64d030a7494 295 SUPERFAMILY SSF53474 20 285 2.83E-43 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS03365 e964e4a60a90480daecda341923f71be 333 PANTHER PTHR32196:SF21 19 328 2.0E-112 T 23-04-2016 RR42_RS03365 e964e4a60a90480daecda341923f71be 333 Pfam PF02653 Branched-chain amino acid transport system / permease component 55 319 3.4E-47 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RR42_RS03365 e964e4a60a90480daecda341923f71be 333 PANTHER PTHR32196 19 328 2.0E-112 T 23-04-2016 RR42_RS19250 64049310eaa0da85e200fc3d15129b2c 206 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 31.148 T 23-04-2016 IPR013005 50S ribosomal protein uL4 RR42_RS19250 64049310eaa0da85e200fc3d15129b2c 206 Pfam PF00573 Ribosomal protein L4/L1 family 17 203 9.0E-61 T 23-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 RR42_RS19250 64049310eaa0da85e200fc3d15129b2c 206 Gene3D G3DSA:3.40.1370.10 58 205 1.0E-51 T 23-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 RR42_RS19250 64049310eaa0da85e200fc3d15129b2c 206 PANTHER PTHR10746 7 205 2.7E-70 T 23-04-2016 IPR013005 50S ribosomal protein uL4 RR42_RS19250 64049310eaa0da85e200fc3d15129b2c 206 SUPERFAMILY SSF52166 1 205 3.14E-67 T 23-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 RR42_RS19250 64049310eaa0da85e200fc3d15129b2c 206 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 18 203 2.4E-69 T 23-04-2016 IPR013005 50S ribosomal protein uL4 RR42_RS00845 2b2712cf5b003095d0a5edae4a6dee94 278 PANTHER PTHR30535 19 179 5.9E-27 T 23-04-2016 RR42_RS00845 2b2712cf5b003095d0a5edae4a6dee94 278 Gene3D G3DSA:3.40.50.1980 19 136 7.9E-22 T 23-04-2016 RR42_RS00845 2b2712cf5b003095d0a5edae4a6dee94 278 SUPERFAMILY SSF53807 19 273 2.12E-35 T 23-04-2016 RR42_RS00845 2b2712cf5b003095d0a5edae4a6dee94 278 Gene3D G3DSA:3.40.50.1980 144 273 4.5E-10 T 23-04-2016 RR42_RS00845 2b2712cf5b003095d0a5edae4a6dee94 278 Pfam PF01497 Periplasmic binding protein 20 183 8.5E-16 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RR42_RS06420 37367545fad1cd0aaa02dbe8ea07c019 216 PANTHER PTHR13887:SF10 4 216 2.1E-45 T 23-04-2016 RR42_RS06420 37367545fad1cd0aaa02dbe8ea07c019 216 Pfam PF01323 DSBA-like thioredoxin domain 6 209 1.7E-26 T 23-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 RR42_RS06420 37367545fad1cd0aaa02dbe8ea07c019 216 SUPERFAMILY SSF52833 3 212 4.73E-37 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS06420 37367545fad1cd0aaa02dbe8ea07c019 216 PANTHER PTHR13887 4 216 2.1E-45 T 23-04-2016 RR42_RS06420 37367545fad1cd0aaa02dbe8ea07c019 216 Gene3D G3DSA:3.40.30.10 2 209 1.2E-37 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS18490 84471408e322039cc9c11b6e2dc365c2 202 PANTHER PTHR30108:SF2 9 202 1.7E-78 T 23-04-2016 RR42_RS18490 84471408e322039cc9c11b6e2dc365c2 202 Pfam PF02441 Flavoprotein 14 138 6.3E-27 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 RR42_RS18490 84471408e322039cc9c11b6e2dc365c2 202 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 14 195 2.9E-71 T 23-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 RR42_RS18490 84471408e322039cc9c11b6e2dc365c2 202 PANTHER PTHR30108 9 202 1.7E-78 T 23-04-2016 RR42_RS18490 84471408e322039cc9c11b6e2dc365c2 202 SUPERFAMILY SSF52507 13 197 4.97E-63 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 RR42_RS18490 84471408e322039cc9c11b6e2dc365c2 202 Gene3D G3DSA:3.40.50.1950 13 197 6.0E-78 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 RR42_RS18490 84471408e322039cc9c11b6e2dc365c2 202 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 13 197 36.932 T 23-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 RR42_RS17950 492a045b3a6f1721d8492518e04d8a3e 86 SUPERFAMILY SSF110324 2 80 2.72E-33 T 23-04-2016 RR42_RS17950 492a045b3a6f1721d8492518e04d8a3e 86 PANTHER PTHR15893 1 85 1.6E-45 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS17950 492a045b3a6f1721d8492518e04d8a3e 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 1.4E-39 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS17950 492a045b3a6f1721d8492518e04d8a3e 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.5E-38 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS17950 492a045b3a6f1721d8492518e04d8a3e 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.5E-38 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS17950 492a045b3a6f1721d8492518e04d8a3e 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.5E-38 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS17950 492a045b3a6f1721d8492518e04d8a3e 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.036 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS17950 492a045b3a6f1721d8492518e04d8a3e 86 Pfam PF01016 Ribosomal L27 protein 2 82 1.8E-37 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS17950 492a045b3a6f1721d8492518e04d8a3e 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 8.0E-17 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS17950 492a045b3a6f1721d8492518e04d8a3e 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 23-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS17950 492a045b3a6f1721d8492518e04d8a3e 86 Gene3D G3DSA:2.40.50.100 20 84 3.4E-31 T 23-04-2016 RR42_RS16810 d73cc1e8c64ccc2443e69f71430b3b57 146 Pfam PF13452 N-terminal half of MaoC dehydratase 5 137 1.6E-46 T 23-04-2016 RR42_RS16810 d73cc1e8c64ccc2443e69f71430b3b57 146 PANTHER PTHR13078:SF52 7 143 2.0E-15 T 23-04-2016 RR42_RS16810 d73cc1e8c64ccc2443e69f71430b3b57 146 Gene3D G3DSA:3.10.129.10 4 146 6.2E-32 T 23-04-2016 IPR029069 HotDog domain RR42_RS16810 d73cc1e8c64ccc2443e69f71430b3b57 146 PANTHER PTHR13078 7 143 2.0E-15 T 23-04-2016 RR42_RS16810 d73cc1e8c64ccc2443e69f71430b3b57 146 SUPERFAMILY SSF54637 6 146 7.02E-36 T 23-04-2016 IPR029069 HotDog domain RR42_RS16810 d73cc1e8c64ccc2443e69f71430b3b57 146 PIRSF PIRSF018072 1 146 2.5E-41 T 23-04-2016 IPR016709 Uncharacterised protein family UPF0336 RR42_RS08225 0478e92f2133902117f48783d92cab45 460 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 240 258 1.0E-5 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RR42_RS08225 0478e92f2133902117f48783d92cab45 460 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 263 283 1.0E-5 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RR42_RS08225 0478e92f2133902117f48783d92cab45 460 SUPERFAMILY SSF110849 15 145 1.57E-13 T 23-04-2016 IPR003115 ParB/Sulfiredoxin RR42_RS08225 0478e92f2133902117f48783d92cab45 460 SUPERFAMILY SSF53335 224 277 1.36E-9 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS08225 0478e92f2133902117f48783d92cab45 460 SUPERFAMILY SSF53335 293 438 1.02E-14 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS08225 0478e92f2133902117f48783d92cab45 460 Pfam PF01555 DNA methylase 235 276 1.9E-5 T 23-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 RR42_RS08225 0478e92f2133902117f48783d92cab45 460 Gene3D G3DSA:3.40.50.150 211 282 2.3E-9 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS08225 0478e92f2133902117f48783d92cab45 460 Gene3D G3DSA:3.40.50.150 294 438 8.2E-12 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS08225 0478e92f2133902117f48783d92cab45 460 Gene3D G3DSA:3.90.1530.10 9 68 6.9E-4 T 23-04-2016 RR42_RS19865 514221ae168f5f44176ebb648c076ed4 437 Gene3D G3DSA:3.40.50.10180 26 256 5.1E-103 T 23-04-2016 RR42_RS19865 514221ae168f5f44176ebb648c076ed4 437 Pfam PF05161 MOFRL family 325 430 1.9E-36 T 23-04-2016 IPR007835 MOFRL domain RR42_RS19865 514221ae168f5f44176ebb648c076ed4 437 Gene3D G3DSA:3.40.1480.10 257 436 1.5E-70 T 23-04-2016 IPR007835 MOFRL domain RR42_RS19865 514221ae168f5f44176ebb648c076ed4 437 Pfam PF13660 Domain of unknown function (DUF4147) 26 246 4.2E-83 T 23-04-2016 IPR025286 MOFRL-associated domain RR42_RS19865 514221ae168f5f44176ebb648c076ed4 437 SUPERFAMILY SSF82544 20 436 7.98E-155 T 23-04-2016 RR42_RS19865 514221ae168f5f44176ebb648c076ed4 437 PANTHER PTHR12227 4 436 7.9E-143 T 23-04-2016 RR42_RS19865 514221ae168f5f44176ebb648c076ed4 437 PANTHER PTHR12227:SF0 4 436 7.9E-143 T 23-04-2016 RR42_RS09645 aa550c7a75369a112dffaaa08165a9c1 315 Gene3D G3DSA:3.40.50.1820 235 309 5.5E-57 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS09645 aa550c7a75369a112dffaaa08165a9c1 315 Gene3D G3DSA:3.40.50.1820 15 190 5.5E-57 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS09645 aa550c7a75369a112dffaaa08165a9c1 315 PANTHER PTHR17630 27 157 7.6E-48 T 23-04-2016 RR42_RS09645 aa550c7a75369a112dffaaa08165a9c1 315 PANTHER PTHR17630 243 309 7.6E-48 T 23-04-2016 RR42_RS09645 aa550c7a75369a112dffaaa08165a9c1 315 PANTHER PTHR17630:SF50 27 157 7.6E-48 T 23-04-2016 RR42_RS09645 aa550c7a75369a112dffaaa08165a9c1 315 PANTHER PTHR17630:SF50 243 309 7.6E-48 T 23-04-2016 RR42_RS09645 aa550c7a75369a112dffaaa08165a9c1 315 Pfam PF05448 Acetyl xylan esterase (AXE1) 99 192 1.2E-10 T 23-04-2016 IPR008391 Acetyl xylan esterase RR42_RS09645 aa550c7a75369a112dffaaa08165a9c1 315 SUPERFAMILY SSF53474 14 156 8.33E-53 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS09645 aa550c7a75369a112dffaaa08165a9c1 315 SUPERFAMILY SSF53474 230 310 8.33E-53 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS17100 30cadbe17a79e2483c991ecc11f1f5ce 337 SUPERFAMILY SSF53850 127 290 7.24E-9 T 23-04-2016 RR42_RS17100 30cadbe17a79e2483c991ecc11f1f5ce 337 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 61 333 5.4E-88 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS17100 30cadbe17a79e2483c991ecc11f1f5ce 337 PIRSF PIRSF017082 3 336 8.5E-73 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS17100 30cadbe17a79e2483c991ecc11f1f5ce 337 PANTHER PTHR30349:SF32 44 307 4.9E-72 T 23-04-2016 RR42_RS17100 30cadbe17a79e2483c991ecc11f1f5ce 337 PANTHER PTHR30349 44 307 4.9E-72 T 23-04-2016 RR42_RS02220 1f8891e952d0bfd754e8992de01580e2 313 SUPERFAMILY SSF46785 2 108 1.32E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS02220 1f8891e952d0bfd754e8992de01580e2 313 SUPERFAMILY SSF53850 85 291 3.57E-33 T 23-04-2016 RR42_RS02220 1f8891e952d0bfd754e8992de01580e2 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 7.4E-16 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS02220 1f8891e952d0bfd754e8992de01580e2 313 PANTHER PTHR30126:SF11 1 300 6.5E-55 T 23-04-2016 RR42_RS02220 1f8891e952d0bfd754e8992de01580e2 313 Gene3D G3DSA:1.10.10.10 2 79 1.7E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS02220 1f8891e952d0bfd754e8992de01580e2 313 Gene3D G3DSA:3.40.190.10 87 169 8.7E-11 T 23-04-2016 RR42_RS02220 1f8891e952d0bfd754e8992de01580e2 313 PANTHER PTHR30126 1 300 6.5E-55 T 23-04-2016 RR42_RS02220 1f8891e952d0bfd754e8992de01580e2 313 Gene3D G3DSA:3.40.190.10 170 260 3.9E-15 T 23-04-2016 RR42_RS02220 1f8891e952d0bfd754e8992de01580e2 313 Pfam PF03466 LysR substrate binding domain 85 275 1.2E-32 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS18210 381c24b2ed5d17556e8874dfbddd3fdf 528 SUPERFAMILY SSF53850 32 514 3.98E-130 T 23-04-2016 RR42_RS18210 381c24b2ed5d17556e8874dfbddd3fdf 528 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 78 99 - T 23-04-2016 IPR023765 Solute-binding protein family 5, conserved site RR42_RS18210 381c24b2ed5d17556e8874dfbddd3fdf 528 PIRSF PIRSF002741 24 526 9.8E-103 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RR42_RS18210 381c24b2ed5d17556e8874dfbddd3fdf 528 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 72 442 6.5E-93 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain RR42_RS18210 381c24b2ed5d17556e8874dfbddd3fdf 528 Gene3D G3DSA:3.10.105.10 305 499 1.6E-57 T 23-04-2016 RR42_RS18210 381c24b2ed5d17556e8874dfbddd3fdf 528 PANTHER PTHR30290 32 280 8.0E-123 T 23-04-2016 RR42_RS18210 381c24b2ed5d17556e8874dfbddd3fdf 528 PANTHER PTHR30290 297 516 8.0E-123 T 23-04-2016 RR42_RS18210 381c24b2ed5d17556e8874dfbddd3fdf 528 Gene3D G3DSA:3.40.190.10 190 304 3.4E-38 T 23-04-2016 RR42_RS18210 381c24b2ed5d17556e8874dfbddd3fdf 528 Gene3D G3DSA:3.90.76.10 40 189 9.4E-37 T 23-04-2016 RR42_RS11175 6eb047f263447ecead3e08324cb26b07 104 PIRSF PIRSF003113 1 103 4.5E-27 T 23-04-2016 IPR002634 BolA protein RR42_RS11175 6eb047f263447ecead3e08324cb26b07 104 SUPERFAMILY SSF82657 4 91 7.46E-26 T 23-04-2016 IPR002634 BolA protein RR42_RS11175 6eb047f263447ecead3e08324cb26b07 104 Pfam PF01722 BolA-like protein 12 88 6.2E-28 T 23-04-2016 IPR002634 BolA protein RR42_RS11175 6eb047f263447ecead3e08324cb26b07 104 PANTHER PTHR12735:SF24 6 88 1.2E-25 T 23-04-2016 RR42_RS11175 6eb047f263447ecead3e08324cb26b07 104 Gene3D G3DSA:3.30.70.1500 3 84 1.0E-27 T 23-04-2016 RR42_RS11175 6eb047f263447ecead3e08324cb26b07 104 PANTHER PTHR12735 6 88 1.2E-25 T 23-04-2016 RR42_RS05990 b8ceeec3432f6deaf17e63a915a1d4d1 398 PRINTS PR00799 Aspartate aminotransferase signature 177 196 9.5E-39 T 23-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RR42_RS05990 b8ceeec3432f6deaf17e63a915a1d4d1 398 PRINTS PR00799 Aspartate aminotransferase signature 208 220 9.5E-39 T 23-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RR42_RS05990 b8ceeec3432f6deaf17e63a915a1d4d1 398 PRINTS PR00799 Aspartate aminotransferase signature 343 361 9.5E-39 T 23-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RR42_RS05990 b8ceeec3432f6deaf17e63a915a1d4d1 398 PRINTS PR00799 Aspartate aminotransferase signature 275 300 9.5E-39 T 23-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RR42_RS05990 b8ceeec3432f6deaf17e63a915a1d4d1 398 PANTHER PTHR11879 1 397 9.8E-237 T 23-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RR42_RS05990 b8ceeec3432f6deaf17e63a915a1d4d1 398 Pfam PF00155 Aminotransferase class I and II 29 394 6.1E-83 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RR42_RS05990 b8ceeec3432f6deaf17e63a915a1d4d1 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 245 258 - T 23-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 RR42_RS05990 b8ceeec3432f6deaf17e63a915a1d4d1 398 PANTHER PTHR11879:SF11 1 397 9.8E-237 T 23-04-2016 RR42_RS05990 b8ceeec3432f6deaf17e63a915a1d4d1 398 Gene3D G3DSA:3.40.640.10 48 317 6.9E-108 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS05990 b8ceeec3432f6deaf17e63a915a1d4d1 398 SUPERFAMILY SSF53383 1 397 6.27E-121 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS13240 e21a6290884df8f71687b52397eb17a0 270 PANTHER PTHR24220:SF561 7 216 2.8E-97 T 23-04-2016 RR42_RS13240 e21a6290884df8f71687b52397eb17a0 270 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS13240 e21a6290884df8f71687b52397eb17a0 270 PANTHER PTHR24220 7 216 2.8E-97 T 23-04-2016 RR42_RS13240 e21a6290884df8f71687b52397eb17a0 270 Pfam PF00005 ABC transporter 29 167 3.1E-26 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS13240 e21a6290884df8f71687b52397eb17a0 270 Gene3D G3DSA:3.40.50.300 2 216 3.1E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13240 e21a6290884df8f71687b52397eb17a0 270 SUPERFAMILY SSF52540 7 232 9.41E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13240 e21a6290884df8f71687b52397eb17a0 270 SMART SM00382 37 217 1.6E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS11360 b8ba406225f2b5f4fabb27faeb0f67c5 474 Pfam PF00171 Aldehyde dehydrogenase family 13 471 1.3E-146 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RR42_RS11360 b8ba406225f2b5f4fabb27faeb0f67c5 474 Gene3D G3DSA:3.40.605.10 7 259 3.0E-73 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RR42_RS11360 b8ba406225f2b5f4fabb27faeb0f67c5 474 PANTHER PTHR11699:SF214 6 473 5.5E-195 T 23-04-2016 RR42_RS11360 b8ba406225f2b5f4fabb27faeb0f67c5 474 SUPERFAMILY SSF53720 6 472 4.45E-147 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RR42_RS11360 b8ba406225f2b5f4fabb27faeb0f67c5 474 PANTHER PTHR11699 6 473 5.5E-195 T 23-04-2016 RR42_RS11360 b8ba406225f2b5f4fabb27faeb0f67c5 474 Gene3D G3DSA:3.40.309.10 260 438 2.3E-66 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RR42_RS01945 a8c17cee571ec62db22a521a2cf75f11 267 Gene3D G3DSA:3.40.50.300 4 223 8.8E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01945 a8c17cee571ec62db22a521a2cf75f11 267 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 24 254 2.7E-102 T 23-04-2016 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 RR42_RS01945 a8c17cee571ec62db22a521a2cf75f11 267 SMART SM00382 33 216 1.1E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS01945 a8c17cee571ec62db22a521a2cf75f11 267 PANTHER PTHR24220 6 259 5.4E-116 T 23-04-2016 RR42_RS01945 a8c17cee571ec62db22a521a2cf75f11 267 SUPERFAMILY SSF52540 5 226 4.21E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01945 a8c17cee571ec62db22a521a2cf75f11 267 PANTHER PTHR24220:SF361 6 259 5.4E-116 T 23-04-2016 RR42_RS01945 a8c17cee571ec62db22a521a2cf75f11 267 Pfam PF00005 ABC transporter 24 166 1.2E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS01945 a8c17cee571ec62db22a521a2cf75f11 267 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS11950 33747dbd16bc3556b626438348108725 383 Gene3D G3DSA:3.30.70.360 196 296 6.2E-37 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS11950 33747dbd16bc3556b626438348108725 383 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 381 5.9E-156 T 23-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 RR42_RS11950 33747dbd16bc3556b626438348108725 383 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 69 78 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RR42_RS11950 33747dbd16bc3556b626438348108725 383 Pfam PF07687 Peptidase dimerisation domain 183 290 5.1E-27 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS11950 33747dbd16bc3556b626438348108725 383 Pfam PF01546 Peptidase family M20/M25/M40 70 379 1.8E-43 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RR42_RS11950 33747dbd16bc3556b626438348108725 383 SUPERFAMILY SSF53187 3 186 7.38E-60 T 23-04-2016 RR42_RS11950 33747dbd16bc3556b626438348108725 383 SUPERFAMILY SSF53187 300 381 7.38E-60 T 23-04-2016 RR42_RS11950 33747dbd16bc3556b626438348108725 383 Gene3D G3DSA:3.40.630.10 2 195 1.7E-71 T 23-04-2016 RR42_RS11950 33747dbd16bc3556b626438348108725 383 Gene3D G3DSA:3.40.630.10 324 382 1.7E-71 T 23-04-2016 RR42_RS11950 33747dbd16bc3556b626438348108725 383 SUPERFAMILY SSF55031 187 296 1.79E-31 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RR42_RS11950 33747dbd16bc3556b626438348108725 383 PANTHER PTHR11014 2 383 1.3E-84 T 23-04-2016 RR42_RS11950 33747dbd16bc3556b626438348108725 383 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 383 51.184 T 23-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 RR42_RS12825 64795d6fe7054bcb25498e4ce381cf2c 417 Gene3D G3DSA:1.20.1600.10 97 190 3.9E-4 T 23-04-2016 RR42_RS12825 64795d6fe7054bcb25498e4ce381cf2c 417 PANTHER PTHR30386:SF6 13 380 1.6E-159 T 23-04-2016 RR42_RS12825 64795d6fe7054bcb25498e4ce381cf2c 417 Pfam PF00529 HlyD membrane-fusion protein of T1SS 39 350 2.7E-16 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RR42_RS12825 64795d6fe7054bcb25498e4ce381cf2c 417 PANTHER PTHR30386 13 380 1.6E-159 T 23-04-2016 RR42_RS12825 64795d6fe7054bcb25498e4ce381cf2c 417 Gene3D G3DSA:2.40.50.100 219 252 9.4E-17 T 23-04-2016 RR42_RS12825 64795d6fe7054bcb25498e4ce381cf2c 417 Gene3D G3DSA:2.40.50.100 65 96 9.4E-17 T 23-04-2016 RR42_RS12825 64795d6fe7054bcb25498e4ce381cf2c 417 SUPERFAMILY SSF111369 61 118 1.24E-7 T 23-04-2016 RR42_RS12825 64795d6fe7054bcb25498e4ce381cf2c 417 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 294 1.3E-13 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RR42_RS12825 64795d6fe7054bcb25498e4ce381cf2c 417 SUPERFAMILY SSF111369 183 272 2.62E-7 T 23-04-2016 RR42_RS02005 9777c741ee16d5a3d40264c5da047a3f 197 Pfam PF01195 Peptidyl-tRNA hydrolase 4 189 2.8E-54 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RR42_RS02005 9777c741ee16d5a3d40264c5da047a3f 197 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 2 187 35.532 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RR42_RS02005 9777c741ee16d5a3d40264c5da047a3f 197 SUPERFAMILY SSF53178 1 194 7.98E-65 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RR42_RS02005 9777c741ee16d5a3d40264c5da047a3f 197 Gene3D G3DSA:3.40.50.1470 1 195 3.9E-68 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RR42_RS02005 9777c741ee16d5a3d40264c5da047a3f 197 PANTHER PTHR17224 1 175 5.1E-70 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RR42_RS02005 9777c741ee16d5a3d40264c5da047a3f 197 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 193 6.0E-58 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RR42_RS02005 9777c741ee16d5a3d40264c5da047a3f 197 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 15 28 - T 23-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 RR42_RS02005 9777c741ee16d5a3d40264c5da047a3f 197 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 109 119 - T 23-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 RR42_RS18705 4f50f42fb4df31a74fdd711cf08bd851 321 Pfam PF06067 Domain of unknown function (DUF932) 75 301 3.0E-78 T 23-04-2016 IPR026325 Protein of unknown function DUF932 RR42_RS18705 4f50f42fb4df31a74fdd711cf08bd851 321 TIGRFAM TIGR03299 LGT_TIGR03299: phage/plasmid-like protein TIGR03299 5 317 4.1E-122 T 23-04-2016 IPR017686 Phage/plasmid-like protein RR42_RS18940 cfb96c05d609182669a512fb610d2aa2 317 SMART SM00382 28 217 1.6E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS18940 cfb96c05d609182669a512fb610d2aa2 317 Gene3D G3DSA:3.40.50.300 3 224 2.1E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18940 cfb96c05d609182669a512fb610d2aa2 317 Pfam PF00005 ABC transporter 19 161 2.3E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS18940 cfb96c05d609182669a512fb610d2aa2 317 PANTHER PTHR24220:SF305 5 223 7.0E-100 T 23-04-2016 RR42_RS18940 cfb96c05d609182669a512fb610d2aa2 317 SUPERFAMILY SSF52540 3 227 3.66E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18940 cfb96c05d609182669a512fb610d2aa2 317 PANTHER PTHR24220 5 223 7.0E-100 T 23-04-2016 RR42_RS18940 cfb96c05d609182669a512fb610d2aa2 317 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS00415 21f57a486db1db8b9bec2900e49387db 301 SUPERFAMILY SSF103481 170 272 6.93E-15 T 23-04-2016 RR42_RS00415 21f57a486db1db8b9bec2900e49387db 301 SUPERFAMILY SSF103481 39 129 6.67E-14 T 23-04-2016 RR42_RS00415 21f57a486db1db8b9bec2900e49387db 301 PANTHER PTHR32322 1 292 1.3E-41 T 23-04-2016 RR42_RS00415 21f57a486db1db8b9bec2900e49387db 301 Pfam PF00892 EamA-like transporter family 2 126 1.5E-12 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS00415 21f57a486db1db8b9bec2900e49387db 301 Pfam PF00892 EamA-like transporter family 137 268 2.2E-20 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS10410 00b2d6475c27e7f90b371cf40533fa6e 127 Gene3D G3DSA:3.10.450.50 3 123 1.2E-35 T 23-04-2016 IPR032710 NTF2-like domain RR42_RS10410 00b2d6475c27e7f90b371cf40533fa6e 127 SUPERFAMILY SSF54427 2 124 9.26E-31 T 23-04-2016 IPR032710 NTF2-like domain RR42_RS10410 00b2d6475c27e7f90b371cf40533fa6e 127 Pfam PF12680 SnoaL-like domain 8 116 1.4E-15 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain RR42_RS13005 50e5492f3f9e7612833bd022c463b041 277 Gene3D G3DSA:3.40.980.10 3 180 3.3E-31 T 23-04-2016 IPR001453 MoaB/Mog domain RR42_RS13005 50e5492f3f9e7612833bd022c463b041 277 SMART SM00852 4 177 2.6E-31 T 23-04-2016 IPR001453 MoaB/Mog domain RR42_RS13005 50e5492f3f9e7612833bd022c463b041 277 PANTHER PTHR13939 1 220 1.6E-31 T 23-04-2016 RR42_RS13005 50e5492f3f9e7612833bd022c463b041 277 SUPERFAMILY SSF53218 3 211 7.07E-37 T 23-04-2016 IPR001453 MoaB/Mog domain RR42_RS13005 50e5492f3f9e7612833bd022c463b041 277 Pfam PF00994 Probable molybdopterin binding domain 5 170 7.2E-27 T 23-04-2016 IPR001453 MoaB/Mog domain RR42_RS00520 72c2c115ec493cfcc7a17e6b250ab870 315 PIRSF PIRSF017082 1 314 2.3E-64 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS00520 72c2c115ec493cfcc7a17e6b250ab870 315 PANTHER PTHR30349:SF1 1 277 1.9E-66 T 23-04-2016 RR42_RS00520 72c2c115ec493cfcc7a17e6b250ab870 315 PANTHER PTHR30349 1 277 1.9E-66 T 23-04-2016 RR42_RS00520 72c2c115ec493cfcc7a17e6b250ab870 315 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 38 310 6.3E-66 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS00520 72c2c115ec493cfcc7a17e6b250ab870 315 SUPERFAMILY SSF53850 99 279 6.51E-9 T 23-04-2016 RR42_RS15010 4eca463baf92570feeecbc21f1b03f74 309 PANTHER PTHR12001 1 309 3.8E-104 T 23-04-2016 IPR017446 Polyprenyl synthetase-related RR42_RS15010 4eca463baf92570feeecbc21f1b03f74 309 SUPERFAMILY SSF48576 16 299 9.07E-83 T 23-04-2016 IPR008949 Isoprenoid synthase domain RR42_RS15010 4eca463baf92570feeecbc21f1b03f74 309 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 94 110 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RR42_RS15010 4eca463baf92570feeecbc21f1b03f74 309 Pfam PF00348 Polyprenyl synthetase 45 275 1.4E-53 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RR42_RS15010 4eca463baf92570feeecbc21f1b03f74 309 Gene3D G3DSA:1.10.600.10 16 302 1.1E-87 T 23-04-2016 IPR008949 Isoprenoid synthase domain RR42_RS15010 4eca463baf92570feeecbc21f1b03f74 309 PANTHER PTHR12001:SF23 1 309 3.8E-104 T 23-04-2016 RR42_RS15010 4eca463baf92570feeecbc21f1b03f74 309 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 228 240 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RR42_RS00815 ab4aab737a739f555580482a49758aa9 138 Pfam PF05957 Bacterial protein of unknown function (DUF883) 45 130 1.5E-11 T 23-04-2016 IPR010279 Protein of unknown function DUF883, ElaB RR42_RS15520 868850ee208bb8da1900c46754dd4f0a 127 Gene3D G3DSA:3.30.700.10 2 102 1.3E-15 T 23-04-2016 RR42_RS15520 868850ee208bb8da1900c46754dd4f0a 127 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 19 107 2.5E-18 T 23-04-2016 IPR031982 Type IV minor pilin ComP RR42_RS15520 868850ee208bb8da1900c46754dd4f0a 127 PANTHER PTHR30093:SF4 1 57 1.4E-16 T 23-04-2016 RR42_RS15520 868850ee208bb8da1900c46754dd4f0a 127 PANTHER PTHR30093 1 57 1.4E-16 T 23-04-2016 RR42_RS15520 868850ee208bb8da1900c46754dd4f0a 127 SUPERFAMILY SSF54523 2 115 1.46E-17 T 23-04-2016 RR42_RS22195 b30d8ac7e60c683503daa9ad3f22e41a 370 SUPERFAMILY SSF53955 284 368 6.86E-19 T 23-04-2016 IPR023346 Lysozyme-like domain RR42_RS22195 b30d8ac7e60c683503daa9ad3f22e41a 370 Gene3D G3DSA:1.10.530.10 311 369 3.3E-18 T 23-04-2016 RR42_RS22195 b30d8ac7e60c683503daa9ad3f22e41a 370 SUPERFAMILY SSF48435 6 312 2.09E-73 T 23-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 RR42_RS22195 b30d8ac7e60c683503daa9ad3f22e41a 370 Pfam PF01464 Transglycosylase SLT domain 321 369 1.2E-8 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 RR42_RS22195 b30d8ac7e60c683503daa9ad3f22e41a 370 Gene3D G3DSA:1.10.1240.20 243 299 1.0E-5 T 23-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 RR42_RS22195 b30d8ac7e60c683503daa9ad3f22e41a 370 Gene3D G3DSA:1.25.20.10 74 224 1.7E-40 T 23-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 RR42_RS22195 b30d8ac7e60c683503daa9ad3f22e41a 370 Gene3D G3DSA:1.25.20.10 5 73 1.3E-6 T 23-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 RR42_RS22195 b30d8ac7e60c683503daa9ad3f22e41a 370 Pfam PF14718 Soluble lytic murein transglycosylase L domain 243 303 3.2E-6 T 23-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 RR42_RS22195 b30d8ac7e60c683503daa9ad3f22e41a 370 PANTHER PTHR21666 301 370 1.4E-15 T 23-04-2016 RR42_RS37540 388442ea5ced2456f9d2c0f63ba4c2c6 316 Pfam PF05488 PAAR motif 12 79 4.7E-7 T 23-04-2016 IPR008727 PAAR motif RR42_RS37540 388442ea5ced2456f9d2c0f63ba4c2c6 316 SMART SM01351 162 315 4.3E-38 T 23-04-2016 IPR029463 Lysine-specific metallo-endopeptidase GO:0004222 RR42_RS37540 388442ea5ced2456f9d2c0f63ba4c2c6 316 SUPERFAMILY SSF55486 141 314 4.39E-12 T 23-04-2016 RR42_RS37540 388442ea5ced2456f9d2c0f63ba4c2c6 316 Pfam PF14521 Lysine-specific metallo-endopeptidase 168 314 4.7E-20 T 23-04-2016 IPR029463 Lysine-specific metallo-endopeptidase GO:0004222 RR42_RS37540 388442ea5ced2456f9d2c0f63ba4c2c6 316 Gene3D G3DSA:3.40.390.10 134 314 2.7E-25 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RR42_RS00365 ad8d3629ba62e8fb6a88a53cfbff6090 471 Gene3D G3DSA:2.30.40.10 6 70 1.0E-21 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS00365 ad8d3629ba62e8fb6a88a53cfbff6090 471 PANTHER PTHR11647 1 464 7.2E-177 T 23-04-2016 RR42_RS00365 ad8d3629ba62e8fb6a88a53cfbff6090 471 SUPERFAMILY SSF51338 362 464 3.84E-34 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS00365 ad8d3629ba62e8fb6a88a53cfbff6090 471 SUPERFAMILY SSF51338 6 83 1.24E-14 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS00365 ad8d3629ba62e8fb6a88a53cfbff6090 471 Pfam PF01979 Amidohydrolase family 53 445 1.2E-31 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RR42_RS00365 ad8d3629ba62e8fb6a88a53cfbff6090 471 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 8 464 1.2E-157 T 23-04-2016 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: REACT_18266 RR42_RS00365 ad8d3629ba62e8fb6a88a53cfbff6090 471 SUPERFAMILY SSF51556 56 392 2.54E-105 T 23-04-2016 IPR032466 Metal-dependent hydrolase RR42_RS00365 ad8d3629ba62e8fb6a88a53cfbff6090 471 PANTHER PTHR11647:SF1 1 464 7.2E-177 T 23-04-2016 RR42_RS00365 ad8d3629ba62e8fb6a88a53cfbff6090 471 Gene3D G3DSA:3.20.20.140 71 432 1.2E-122 T 23-04-2016 RR42_RS01710 3092264a31d57933aa67a9ea02611729 544 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 153 168 - T 23-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 RR42_RS01710 3092264a31d57933aa67a9ea02611729 544 PANTHER PTHR10362 18 537 5.0E-184 T 23-04-2016 RR42_RS01710 3092264a31d57933aa67a9ea02611729 544 SUPERFAMILY SSF48557 15 536 4.16E-176 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 RR42_RS01710 3092264a31d57933aa67a9ea02611729 544 Gene3D G3DSA:1.20.200.10 213 537 4.6E-110 T 23-04-2016 RR42_RS01710 3092264a31d57933aa67a9ea02611729 544 Pfam PF00221 Aromatic amino acid lyase 25 505 2.0E-169 T 23-04-2016 IPR001106 Aromatic amino acid lyase RR42_RS01710 3092264a31d57933aa67a9ea02611729 544 TIGRFAM TIGR03832 Tyr_2_3_mutase: tyrosine 2,3-aminomutase 20 526 1.5E-269 T 23-04-2016 IPR022314 Tyrosine 2,3-aminomutase, putative KEGG: 00350+5.4.3.6+4.3.1.23 RR42_RS01710 3092264a31d57933aa67a9ea02611729 544 PANTHER PTHR10362:SF7 18 537 5.0E-184 T 23-04-2016 RR42_RS01710 3092264a31d57933aa67a9ea02611729 544 Gene3D G3DSA:1.10.275.10 9 212 9.5E-69 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal RR42_RS11495 2f89a3e2f264e2177e9a277f48294c93 254 Gene3D G3DSA:2.60.40.10 172 252 4.5E-11 T 23-04-2016 IPR013783 Immunoglobulin-like fold RR42_RS11495 2f89a3e2f264e2177e9a277f48294c93 254 Pfam PF13501 Sulfur oxidation protein SoxY 38 141 3.6E-24 T 23-04-2016 IPR032711 Ig-like SoxY domain RR42_RS11495 2f89a3e2f264e2177e9a277f48294c93 254 Pfam PF08770 Sulphur oxidation protein SoxZ 172 252 2.3E-7 T 23-04-2016 IPR014880 Sulphur oxidation protein SoxZ RR42_RS11495 2f89a3e2f264e2177e9a277f48294c93 254 SUPERFAMILY SSF81296 169 252 2.52E-14 T 23-04-2016 IPR014756 Immunoglobulin E-set RR42_RS11495 2f89a3e2f264e2177e9a277f48294c93 254 TIGRFAM TIGR04557 fuse_rel_SoxYZ: quinoprotein dehydrogenase-associated SoxYZ-like carrier 32 248 1.5E-65 T 23-04-2016 IPR030831 Quinoprotein dehydrogenase-associated SoxYZ-like carrier RR42_RS18890 f757dcaa40bb3041fe16865f9ee53d5f 248 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 240 36.683 T 23-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 RR42_RS18890 f757dcaa40bb3041fe16865f9ee53d5f 248 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 236 6.3E-79 T 23-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 RR42_RS18890 f757dcaa40bb3041fe16865f9ee53d5f 248 SUPERFAMILY SSF51366 1 239 5.49E-76 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RR42_RS18890 f757dcaa40bb3041fe16865f9ee53d5f 248 Pfam PF00977 Histidine biosynthesis protein 3 232 1.7E-80 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 RR42_RS18890 f757dcaa40bb3041fe16865f9ee53d5f 248 Gene3D G3DSA:3.20.20.70 1 240 7.0E-90 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS18890 f757dcaa40bb3041fe16865f9ee53d5f 248 PANTHER PTHR21235:SF15 1 245 4.3E-100 T 23-04-2016 RR42_RS18890 f757dcaa40bb3041fe16865f9ee53d5f 248 PANTHER PTHR21235 1 245 4.3E-100 T 23-04-2016 RR42_RS03840 6a4196d77df8f19dc964794f6752d7c1 248 Pfam PF13531 Bacterial extracellular solute-binding protein 23 245 7.6E-51 T 23-04-2016 RR42_RS03840 6a4196d77df8f19dc964794f6752d7c1 248 PANTHER PTHR30632 1 245 1.9E-60 T 23-04-2016 RR42_RS03840 6a4196d77df8f19dc964794f6752d7c1 248 Gene3D G3DSA:3.40.190.10 113 205 1.7E-35 T 23-04-2016 RR42_RS03840 6a4196d77df8f19dc964794f6752d7c1 248 PANTHER PTHR30632:SF0 1 245 1.9E-60 T 23-04-2016 RR42_RS03840 6a4196d77df8f19dc964794f6752d7c1 248 Gene3D G3DSA:3.40.190.10 206 246 6.6E-17 T 23-04-2016 RR42_RS03840 6a4196d77df8f19dc964794f6752d7c1 248 Gene3D G3DSA:3.40.190.10 23 112 6.6E-17 T 23-04-2016 RR42_RS03840 6a4196d77df8f19dc964794f6752d7c1 248 PIRSF PIRSF004846 1 248 1.4E-69 T 23-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 RR42_RS03840 6a4196d77df8f19dc964794f6752d7c1 248 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 28 244 3.6E-59 T 23-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 RR42_RS03840 6a4196d77df8f19dc964794f6752d7c1 248 SUPERFAMILY SSF53850 22 248 4.02E-66 T 23-04-2016 RR42_RS00800 8c949cbf972f1e9f548d81247ef227fa 484 Pfam PF05227 CHASE3 domain 40 170 3.4E-30 T 23-04-2016 IPR007891 CHASE3 RR42_RS00800 8c949cbf972f1e9f548d81247ef227fa 484 SUPERFAMILY SSF55874 324 448 4.32E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS00800 8c949cbf972f1e9f548d81247ef227fa 484 PANTHER PTHR24421:SF1 244 463 3.2E-34 T 23-04-2016 RR42_RS00800 8c949cbf972f1e9f548d81247ef227fa 484 PANTHER PTHR24421:SF1 8 53 3.2E-34 T 23-04-2016 RR42_RS00800 8c949cbf972f1e9f548d81247ef227fa 484 Pfam PF07730 Histidine kinase 249 316 1.9E-13 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RR42_RS00800 8c949cbf972f1e9f548d81247ef227fa 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 449 2.7E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS00800 8c949cbf972f1e9f548d81247ef227fa 484 Gene3D G3DSA:3.30.565.10 326 451 1.0E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS00800 8c949cbf972f1e9f548d81247ef227fa 484 SMART SM00387 354 450 7.6E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS00800 8c949cbf972f1e9f548d81247ef227fa 484 PANTHER PTHR24421 244 463 3.2E-34 T 23-04-2016 RR42_RS00800 8c949cbf972f1e9f548d81247ef227fa 484 PANTHER PTHR24421 8 53 3.2E-34 T 23-04-2016 RR42_RS01900 6caf393e9c7014e1764577668a493dc7 69 Pfam PF11137 Protein of unknown function (DUF2909) 1 60 2.3E-24 T 23-04-2016 IPR021313 Protein of unknown function DUF2909 RR42_RS01045 659ae7fd3745bfc69b6d297c85522fe4 173 PANTHER PTHR33202 22 167 1.3E-16 T 23-04-2016 RR42_RS01045 659ae7fd3745bfc69b6d297c85522fe4 173 SUPERFAMILY SSF46785 26 162 5.13E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS01045 659ae7fd3745bfc69b6d297c85522fe4 173 Gene3D G3DSA:1.10.10.10 25 103 3.4E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS01045 659ae7fd3745bfc69b6d297c85522fe4 173 Pfam PF01475 Ferric uptake regulator family 33 156 2.1E-11 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 RR42_RS01535 ed66af86c227d9e5b61ea2b116ecba39 215 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 3 202 34.07 T 23-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS01535 ed66af86c227d9e5b61ea2b116ecba39 215 PANTHER PTHR11670:SF27 14 200 8.6E-69 T 23-04-2016 RR42_RS01535 ed66af86c227d9e5b61ea2b116ecba39 215 Gene3D G3DSA:3.20.19.10 9 195 4.7E-38 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RR42_RS01535 ed66af86c227d9e5b61ea2b116ecba39 215 SUPERFAMILY SSF52016 7 193 1.39E-49 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RR42_RS01535 ed66af86c227d9e5b61ea2b116ecba39 215 PANTHER PTHR11670 14 200 8.6E-69 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS01535 ed66af86c227d9e5b61ea2b116ecba39 215 Pfam PF00694 Aconitase C-terminal domain 15 125 6.2E-29 T 23-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS01535 ed66af86c227d9e5b61ea2b116ecba39 215 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 12 188 2.1E-55 T 23-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RR42_RS16125 128b198c94ccec110867fc1223c62347 213 PANTHER PTHR30069 17 212 3.0E-61 T 23-04-2016 RR42_RS16125 128b198c94ccec110867fc1223c62347 213 PIRSF PIRSF015617 16 213 3.9E-68 T 23-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RR42_RS16125 128b198c94ccec110867fc1223c62347 213 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 13 36 9.8E-9 T 23-04-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RR42_RS16125 128b198c94ccec110867fc1223c62347 213 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 43 212 2.3E-56 T 23-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RR42_RS16125 128b198c94ccec110867fc1223c62347 213 SUPERFAMILY SSF52540 22 212 1.95E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS16125 128b198c94ccec110867fc1223c62347 213 Gene3D G3DSA:3.40.50.300 18 213 2.6E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS16125 128b198c94ccec110867fc1223c62347 213 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 39 212 5.5E-67 T 23-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RR42_RS19660 9a34c82960075219bfd56dd1723bc96f 573 PANTHER PTHR11575:SF16 99 521 7.6E-169 T 23-04-2016 RR42_RS19660 9a34c82960075219bfd56dd1723bc96f 573 SUPERFAMILY SSF56300 39 60 3.2E-75 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS19660 9a34c82960075219bfd56dd1723bc96f 573 SUPERFAMILY SSF56300 114 378 3.2E-75 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS19660 9a34c82960075219bfd56dd1723bc96f 573 Pfam PF02872 5'-nucleotidase, C-terminal domain 397 521 2.4E-14 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 RR42_RS19660 9a34c82960075219bfd56dd1723bc96f 573 Gene3D G3DSA:3.90.780.10 398 521 9.4E-17 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 RR42_RS19660 9a34c82960075219bfd56dd1723bc96f 573 SUPERFAMILY SSF55816 377 558 1.29E-29 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 RR42_RS19660 9a34c82960075219bfd56dd1723bc96f 573 Gene3D G3DSA:3.60.21.10 114 377 8.4E-77 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS19660 9a34c82960075219bfd56dd1723bc96f 573 Gene3D G3DSA:3.60.21.10 41 60 8.4E-77 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS19660 9a34c82960075219bfd56dd1723bc96f 573 TIGRFAM TIGR04486 thiosulf_SoxB: thiosulfohydrolase SoxB 2 564 7.7E-268 T 23-04-2016 IPR030998 Thiosulfohydrolase SoxB RR42_RS19660 9a34c82960075219bfd56dd1723bc96f 573 PRINTS PR01607 Apyrase family signature 41 59 4.9E-10 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RR42_RS19660 9a34c82960075219bfd56dd1723bc96f 573 PRINTS PR01607 Apyrase family signature 317 337 4.9E-10 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RR42_RS19660 9a34c82960075219bfd56dd1723bc96f 573 PRINTS PR01607 Apyrase family signature 266 283 4.9E-10 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RR42_RS19660 9a34c82960075219bfd56dd1723bc96f 573 PRINTS PR01607 Apyrase family signature 285 308 4.9E-10 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RR42_RS19660 9a34c82960075219bfd56dd1723bc96f 573 PANTHER PTHR11575 99 521 7.6E-169 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RR42_RS13285 60ba07cc4dbcade9f5fbf7d72f570fcd 766 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 646 761 1.9E-7 T 23-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RR42_RS13285 60ba07cc4dbcade9f5fbf7d72f570fcd 766 SUPERFAMILY SSF52540 32 229 2.18E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13285 60ba07cc4dbcade9f5fbf7d72f570fcd 766 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 237 369 9.0E-24 T 23-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 RR42_RS13285 60ba07cc4dbcade9f5fbf7d72f570fcd 766 Gene3D G3DSA:3.40.50.300 15 171 2.7E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS13285 60ba07cc4dbcade9f5fbf7d72f570fcd 766 PANTHER PTHR11669 1 375 8.7E-165 T 23-04-2016 RR42_RS13285 60ba07cc4dbcade9f5fbf7d72f570fcd 766 PANTHER PTHR11669 414 465 8.7E-165 T 23-04-2016 RR42_RS13285 60ba07cc4dbcade9f5fbf7d72f570fcd 766 PANTHER PTHR11669:SF0 1 375 8.7E-165 T 23-04-2016 RR42_RS13285 60ba07cc4dbcade9f5fbf7d72f570fcd 766 PANTHER PTHR11669:SF0 414 465 8.7E-165 T 23-04-2016 RR42_RS13285 60ba07cc4dbcade9f5fbf7d72f570fcd 766 SUPERFAMILY SSF48019 249 369 1.5E-30 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 RR42_RS13285 60ba07cc4dbcade9f5fbf7d72f570fcd 766 Gene3D G3DSA:1.20.272.10 248 365 3.8E-41 T 23-04-2016 RR42_RS13285 60ba07cc4dbcade9f5fbf7d72f570fcd 766 Gene3D G3DSA:1.10.8.60 172 247 2.8E-31 T 23-04-2016 RR42_RS13285 60ba07cc4dbcade9f5fbf7d72f570fcd 766 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 360 2.3E-125 T 23-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 RR42_RS13285 60ba07cc4dbcade9f5fbf7d72f570fcd 766 Pfam PF13177 DNA polymerase III, delta subunit 20 183 2.2E-38 T 23-04-2016 RR42_RS13285 60ba07cc4dbcade9f5fbf7d72f570fcd 766 SMART SM00382 37 184 2.0E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS07825 045fd2df574542410de64db502ed0c65 422 PANTHER PTHR13847 2 422 2.8E-59 T 23-04-2016 RR42_RS07825 045fd2df574542410de64db502ed0c65 422 Pfam PF01266 FAD dependent oxidoreductase 10 402 5.3E-62 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RR42_RS07825 045fd2df574542410de64db502ed0c65 422 SUPERFAMILY SSF51905 9 221 1.42E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS07825 045fd2df574542410de64db502ed0c65 422 SUPERFAMILY SSF51905 363 420 1.42E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS07825 045fd2df574542410de64db502ed0c65 422 Gene3D G3DSA:3.50.50.60 363 420 1.3E-60 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS07825 045fd2df574542410de64db502ed0c65 422 Gene3D G3DSA:3.50.50.60 3 85 1.3E-60 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS07825 045fd2df574542410de64db502ed0c65 422 Gene3D G3DSA:3.50.50.60 142 220 1.3E-60 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS07825 045fd2df574542410de64db502ed0c65 422 Gene3D G3DSA:3.30.9.10 92 141 1.0E-5 T 23-04-2016 RR42_RS07825 045fd2df574542410de64db502ed0c65 422 Gene3D G3DSA:3.30.9.10 221 362 1.0E-5 T 23-04-2016 RR42_RS19270 4f4d84d2511b8f91b978f8cb61a5de90 262 PANTHER PTHR24321:SF6 4 247 5.0E-41 T 23-04-2016 RR42_RS19270 4f4d84d2511b8f91b978f8cb61a5de90 262 PANTHER PTHR24321 4 247 5.0E-41 T 23-04-2016 RR42_RS19270 4f4d84d2511b8f91b978f8cb61a5de90 262 Gene3D G3DSA:3.40.50.720 2 254 9.3E-77 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS19270 4f4d84d2511b8f91b978f8cb61a5de90 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RR42_RS19270 4f4d84d2511b8f91b978f8cb61a5de90 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 246 9.9E-62 T 23-04-2016 RR42_RS19270 4f4d84d2511b8f91b978f8cb61a5de90 262 SUPERFAMILY SSF51735 6 249 2.74E-72 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS19270 4f4d84d2511b8f91b978f8cb61a5de90 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.8E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS19270 4f4d84d2511b8f91b978f8cb61a5de90 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 5.8E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS19270 4f4d84d2511b8f91b978f8cb61a5de90 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 5.8E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS19270 4f4d84d2511b8f91b978f8cb61a5de90 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 5.8E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS19270 4f4d84d2511b8f91b978f8cb61a5de90 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 5.8E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS19270 4f4d84d2511b8f91b978f8cb61a5de90 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 5.8E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS19270 4f4d84d2511b8f91b978f8cb61a5de90 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 2.3E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS19270 4f4d84d2511b8f91b978f8cb61a5de90 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.3E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS19270 4f4d84d2511b8f91b978f8cb61a5de90 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 2.3E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS00830 2a1b5a76c3a0910ffd012e4c223bffc5 258 PANTHER PTHR34183 117 257 1.8E-12 T 23-04-2016 RR42_RS00830 2a1b5a76c3a0910ffd012e4c223bffc5 258 Gene3D G3DSA:3.30.70.1070 176 257 7.0E-26 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 RR42_RS00830 2a1b5a76c3a0910ffd012e4c223bffc5 258 Pfam PF05036 Sporulation related domain 182 254 1.7E-17 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 RR42_RS00830 2a1b5a76c3a0910ffd012e4c223bffc5 258 SUPERFAMILY SSF110997 180 256 3.4E-19 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 RR42_RS00830 2a1b5a76c3a0910ffd012e4c223bffc5 258 PANTHER PTHR34183:SF1 117 257 1.8E-12 T 23-04-2016 RR42_RS05330 dac9682c7da2bdc864115c850b50741c 344 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 26 310 1.4E-102 T 23-04-2016 IPR014308 Xanthine dehydrogenase accessory protein XdhC RR42_RS05330 dac9682c7da2bdc864115c850b50741c 344 Pfam PF02625 XdhC and CoxI family 17 81 1.6E-17 T 23-04-2016 IPR003777 XdhC- CoxI RR42_RS05330 dac9682c7da2bdc864115c850b50741c 344 PANTHER PTHR30388 11 312 1.3E-73 T 23-04-2016 RR42_RS05330 dac9682c7da2bdc864115c850b50741c 344 PANTHER PTHR30388:SF5 11 312 1.3E-73 T 23-04-2016 RR42_RS05330 dac9682c7da2bdc864115c850b50741c 344 Gene3D G3DSA:3.50.50.60 159 206 1.2E-4 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS05330 dac9682c7da2bdc864115c850b50741c 344 Pfam PF13478 XdhC Rossmann domain 167 309 4.4E-37 T 23-04-2016 IPR027051 XdhC Rossmann domain RR42_RS19025 31c10ab76801ca8e9edc5d80722780bb 226 Pfam PF04350 Pilus assembly protein, PilO 62 202 9.3E-43 T 23-04-2016 IPR007445 Pilus assembly protein, PilO RR42_RS19025 31c10ab76801ca8e9edc5d80722780bb 226 PIRSF PIRSF016482 5 219 4.8E-49 T 23-04-2016 IPR007445 Pilus assembly protein, PilO RR42_RS19025 31c10ab76801ca8e9edc5d80722780bb 226 Gene3D G3DSA:3.30.70.60 107 212 6.5E-32 T 23-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RR42_RS19025 31c10ab76801ca8e9edc5d80722780bb 226 Gene3D G3DSA:1.10.287.540 71 98 3.6E-6 T 23-04-2016 IPR023218 UPF0291 structural domain RR42_RS19025 31c10ab76801ca8e9edc5d80722780bb 226 PANTHER PTHR39555:SF1 13 215 2.4E-37 T 23-04-2016 RR42_RS19025 31c10ab76801ca8e9edc5d80722780bb 226 PANTHER PTHR39555 13 215 2.4E-37 T 23-04-2016 RR42_RS09055 b5d4739b5d1b395b78ef1bdbf72ddbf9 232 SMART SM00382 34 221 3.2E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS09055 b5d4739b5d1b395b78ef1bdbf72ddbf9 232 SUPERFAMILY SSF52540 5 226 1.61E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS09055 b5d4739b5d1b395b78ef1bdbf72ddbf9 232 Pfam PF00005 ABC transporter 25 172 7.3E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS09055 b5d4739b5d1b395b78ef1bdbf72ddbf9 232 PANTHER PTHR24220:SF509 7 226 1.2E-95 T 23-04-2016 RR42_RS09055 b5d4739b5d1b395b78ef1bdbf72ddbf9 232 Gene3D G3DSA:3.40.50.300 5 224 3.2E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS09055 b5d4739b5d1b395b78ef1bdbf72ddbf9 232 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS09055 b5d4739b5d1b395b78ef1bdbf72ddbf9 232 PANTHER PTHR24220 7 226 1.2E-95 T 23-04-2016 RR42_RS00290 33925241255fd590ba0c7ff7197e9c2d 384 SUPERFAMILY SSF110296 109 369 3.14E-51 T 23-04-2016 RR42_RS00290 33925241255fd590ba0c7ff7197e9c2d 384 SUPERFAMILY SSF110296 3 81 3.14E-51 T 23-04-2016 RR42_RS00290 33925241255fd590ba0c7ff7197e9c2d 384 Gene3D G3DSA:2.130.10.10 4 382 5.2E-69 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RR42_RS02650 8cb69064a41a7232cb9cea46ea254532 265 SUPERFAMILY SSF51197 2 264 4.58E-63 T 23-04-2016 RR42_RS02650 8cb69064a41a7232cb9cea46ea254532 265 PANTHER PTHR20883 7 263 7.5E-59 T 23-04-2016 RR42_RS02650 8cb69064a41a7232cb9cea46ea254532 265 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 11 218 1.8E-22 T 23-04-2016 IPR008775 Phytanoyl-CoA dioxygenase RR42_RS02650 8cb69064a41a7232cb9cea46ea254532 265 Gene3D G3DSA:2.60.120.620 2 241 2.5E-57 T 23-04-2016 RR42_RS02650 8cb69064a41a7232cb9cea46ea254532 265 PANTHER PTHR20883:SF11 7 263 7.5E-59 T 23-04-2016 RR42_RS04740 7e2d97dc1ab39cbb8691befede2111f3 516 PANTHER PTHR30121:SF3 18 440 5.2E-169 T 23-04-2016 RR42_RS04740 7e2d97dc1ab39cbb8691befede2111f3 516 SUPERFAMILY SSF52540 18 368 5.33E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04740 7e2d97dc1ab39cbb8691befede2111f3 516 Gene3D G3DSA:3.40.50.300 204 379 4.6E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04740 7e2d97dc1ab39cbb8691befede2111f3 516 Gene3D G3DSA:3.40.50.300 5 108 4.6E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04740 7e2d97dc1ab39cbb8691befede2111f3 516 PANTHER PTHR30121 18 440 5.2E-169 T 23-04-2016 RR42_RS04740 7e2d97dc1ab39cbb8691befede2111f3 516 Pfam PF05872 Bacterial protein of unknown function (DUF853) 4 514 7.6E-237 T 23-04-2016 IPR033186 Helicase HerA-like C-terminal RR42_RS12410 738f67c24853e4cc3e8bc13634950fb2 418 Pfam PF00144 Beta-lactamase 26 401 1.4E-70 T 23-04-2016 IPR001466 Beta-lactamase-related RR42_RS12410 738f67c24853e4cc3e8bc13634950fb2 418 Gene3D G3DSA:3.40.710.10 6 407 1.8E-84 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS12410 738f67c24853e4cc3e8bc13634950fb2 418 SUPERFAMILY SSF56601 12 406 3.15E-92 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS12410 738f67c24853e4cc3e8bc13634950fb2 418 PANTHER PTHR22935 6 412 3.2E-113 T 23-04-2016 RR42_RS12410 738f67c24853e4cc3e8bc13634950fb2 418 PANTHER PTHR22935:SF77 6 412 3.2E-113 T 23-04-2016 RR42_RS03050 9f81a7899e343f96fc2d459ee0978a48 246 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 186 242 1.0E-9 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 RR42_RS03050 9f81a7899e343f96fc2d459ee0978a48 246 SUPERFAMILY SSF74653 149 240 1.16E-17 T 23-04-2016 RR42_RS03050 9f81a7899e343f96fc2d459ee0978a48 246 TIGRFAM TIGR02794 tolA_full: protein TolA 95 231 4.9E-19 T 23-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 RR42_RS03050 9f81a7899e343f96fc2d459ee0978a48 246 Pfam PF13103 TonB C terminal 161 242 4.6E-22 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 RR42_RS03050 9f81a7899e343f96fc2d459ee0978a48 246 Gene3D G3DSA:3.30.1150.10 139 245 2.3E-26 T 23-04-2016 RR42_RS11490 8a3ad4f777f1b5d8cbf8b3c0cd1700b6 313 SMART SM00849 55 239 4.4E-6 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS11490 8a3ad4f777f1b5d8cbf8b3c0cd1700b6 313 TIGRFAM TIGR04558 SoxH_rel_PQQ_1: quinoprotein relay system zinc metallohydrolase 1 25 311 6.6E-123 T 23-04-2016 IPR030811 Quinoprotein relay system zinc metallohydrolase 1 RR42_RS11490 8a3ad4f777f1b5d8cbf8b3c0cd1700b6 313 SUPERFAMILY SSF56281 4 312 1.45E-49 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS11490 8a3ad4f777f1b5d8cbf8b3c0cd1700b6 313 Gene3D G3DSA:3.60.15.10 29 265 8.7E-35 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS11490 8a3ad4f777f1b5d8cbf8b3c0cd1700b6 313 PANTHER PTHR11935:SF95 9 257 3.9E-13 T 23-04-2016 RR42_RS11490 8a3ad4f777f1b5d8cbf8b3c0cd1700b6 313 Pfam PF00753 Metallo-beta-lactamase superfamily 52 239 4.9E-7 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS11490 8a3ad4f777f1b5d8cbf8b3c0cd1700b6 313 PANTHER PTHR11935 9 257 3.9E-13 T 23-04-2016 RR42_RS10575 b683ae213ea52b41ca79761594295b21 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 2.4E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10575 b683ae213ea52b41ca79761594295b21 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 2.4E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10575 b683ae213ea52b41ca79761594295b21 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.4E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10575 b683ae213ea52b41ca79761594295b21 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 133 2.4E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10575 b683ae213ea52b41ca79761594295b21 234 Pfam PF00106 short chain dehydrogenase 7 182 6.3E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10575 b683ae213ea52b41ca79761594295b21 234 SUPERFAMILY SSF51735 5 206 2.24E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10575 b683ae213ea52b41ca79761594295b21 234 PANTHER PTHR24322:SF546 143 175 2.4E-41 T 23-04-2016 RR42_RS10575 b683ae213ea52b41ca79761594295b21 234 PANTHER PTHR24322:SF546 10 127 2.4E-41 T 23-04-2016 RR42_RS10575 b683ae213ea52b41ca79761594295b21 234 PANTHER PTHR24322 143 175 2.4E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10575 b683ae213ea52b41ca79761594295b21 234 PANTHER PTHR24322 10 127 2.4E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10575 b683ae213ea52b41ca79761594295b21 234 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 130 158 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RR42_RS10575 b683ae213ea52b41ca79761594295b21 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 3.0E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10575 b683ae213ea52b41ca79761594295b21 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 131 3.0E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10575 b683ae213ea52b41ca79761594295b21 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 162 3.0E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10575 b683ae213ea52b41ca79761594295b21 234 Gene3D G3DSA:3.40.50.720 2 211 2.0E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS18775 0282da69ca8df533391f5b45552d01f3 671 Gene3D G3DSA:3.30.565.10 23 191 3.9E-6 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS18775 0282da69ca8df533391f5b45552d01f3 671 SUPERFAMILY SSF55874 17 163 1.84E-6 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RR42_RS14540 474b3633c41ababd8687682a160b0703 129 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 1 117 7.6E-27 T 23-04-2016 IPR026353 Hypoxanthine-DNA glycosylase RR42_RS14540 474b3633c41ababd8687682a160b0703 129 Gene3D G3DSA:3.40.470.10 1 125 8.5E-17 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RR42_RS14540 474b3633c41ababd8687682a160b0703 129 SUPERFAMILY SSF52141 1 123 1.96E-20 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RR42_RS09230 e8bafb8932460e3240d46b81f5bdf5cc 423 SUPERFAMILY SSF111369 196 272 4.32E-7 T 23-04-2016 RR42_RS09230 e8bafb8932460e3240d46b81f5bdf5cc 423 Pfam PF00529 HlyD membrane-fusion protein of T1SS 190 352 2.4E-12 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RR42_RS09230 e8bafb8932460e3240d46b81f5bdf5cc 423 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 294 2.9E-13 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RR42_RS09230 e8bafb8932460e3240d46b81f5bdf5cc 423 PANTHER PTHR30386 1 381 1.8E-150 T 23-04-2016 RR42_RS09230 e8bafb8932460e3240d46b81f5bdf5cc 423 Gene3D G3DSA:2.40.50.100 67 99 1.3E-15 T 23-04-2016 RR42_RS09230 e8bafb8932460e3240d46b81f5bdf5cc 423 Gene3D G3DSA:2.40.50.100 220 253 1.3E-15 T 23-04-2016 RR42_RS09230 e8bafb8932460e3240d46b81f5bdf5cc 423 SUPERFAMILY SSF111369 65 119 2.09E-6 T 23-04-2016 RR42_RS09230 e8bafb8932460e3240d46b81f5bdf5cc 423 SUPERFAMILY SSF111369 124 187 2.09E-6 T 23-04-2016 RR42_RS09230 e8bafb8932460e3240d46b81f5bdf5cc 423 PANTHER PTHR30386:SF6 1 381 1.8E-150 T 23-04-2016 RR42_RS17510 54060d2bfc662c719bccd395cd691196 348 Pfam PF00072 Response regulator receiver domain 101 166 1.4E-8 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS17510 54060d2bfc662c719bccd395cd691196 348 SUPERFAMILY SSF52172 20 57 3.84E-13 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS17510 54060d2bfc662c719bccd395cd691196 348 SUPERFAMILY SSF52172 103 165 3.84E-13 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS17510 54060d2bfc662c719bccd395cd691196 348 Gene3D G3DSA:3.40.50.2300 103 171 4.4E-16 T 23-04-2016 RR42_RS17510 54060d2bfc662c719bccd395cd691196 348 Gene3D G3DSA:3.40.50.2300 20 57 4.4E-16 T 23-04-2016 RR42_RS12270 6717cd42afc490f92bb3f52f4f25bc60 294 SUPERFAMILY SSF141868 43 269 1.7E-21 T 23-04-2016 IPR001633 EAL domain RR42_RS12270 6717cd42afc490f92bb3f52f4f25bc60 294 Pfam PF00563 EAL domain 38 259 3.6E-15 T 23-04-2016 IPR001633 EAL domain RR42_RS12270 6717cd42afc490f92bb3f52f4f25bc60 294 Gene3D G3DSA:3.20.20.450 48 269 2.4E-12 T 23-04-2016 IPR001633 EAL domain RR42_RS09755 9e0d64daad850e81cd8e5771d71da0cf 126 SUPERFAMILY SSF57716 84 118 5.56E-10 T 23-04-2016 RR42_RS09755 9e0d64daad850e81cd8e5771d71da0cf 126 PANTHER PTHR33823 1 118 2.2E-14 T 23-04-2016 RR42_RS09755 9e0d64daad850e81cd8e5771d71da0cf 126 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 83 117 1.2E-16 T 23-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 RR42_RS02920 c3858b15d57bf157e0f3839f1084766d 124 Pfam PF12778 PXPV repeat (3 copies) 32 51 7.2E-6 T 23-04-2016 IPR024446 PXPV repeat RR42_RS02920 c3858b15d57bf157e0f3839f1084766d 124 Pfam PF12778 PXPV repeat (3 copies) 55 71 0.0022 T 23-04-2016 IPR024446 PXPV repeat RR42_RS04630 c3fdaea6e8ac96a5721504d78865b799 268 SUPERFAMILY SSF75217 1 243 2.75E-94 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases RR42_RS04630 c3fdaea6e8ac96a5721504d78865b799 268 Gene3D G3DSA:1.10.1270.20 173 256 2.8E-32 T 23-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RR42_RS04630 c3fdaea6e8ac96a5721504d78865b799 268 PANTHER PTHR32125 1 240 5.7E-102 T 23-04-2016 RR42_RS04630 c3fdaea6e8ac96a5721504d78865b799 268 Gene3D G3DSA:3.40.1280.10 1 172 6.6E-62 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RR42_RS04630 c3fdaea6e8ac96a5721504d78865b799 268 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 233 1.8E-58 T 23-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RR42_RS04630 c3fdaea6e8ac96a5721504d78865b799 268 PANTHER PTHR32125:SF1 1 240 5.7E-102 T 23-04-2016 RR42_RS04630 c3fdaea6e8ac96a5721504d78865b799 268 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 268 106.91 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RR42_RS04630 c3fdaea6e8ac96a5721504d78865b799 268 PIRSF PIRSF000386 1 261 1.1E-92 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RR42_RS04630 c3fdaea6e8ac96a5721504d78865b799 268 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 239 2.3E-90 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RR42_RS04280 13ceb619152bee0091c90c88c145d8fa 478 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RR42_RS04280 13ceb619152bee0091c90c88c145d8fa 478 Pfam PF00171 Aldehyde dehydrogenase family 18 473 1.9E-155 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RR42_RS04280 13ceb619152bee0091c90c88c145d8fa 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RR42_RS04280 13ceb619152bee0091c90c88c145d8fa 478 PANTHER PTHR11699 1 477 4.4E-197 T 23-04-2016 RR42_RS04280 13ceb619152bee0091c90c88c145d8fa 478 Gene3D G3DSA:3.40.605.10 2 261 1.1E-88 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RR42_RS04280 13ceb619152bee0091c90c88c145d8fa 478 SUPERFAMILY SSF53720 2 476 3.14E-153 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RR42_RS04280 13ceb619152bee0091c90c88c145d8fa 478 Gene3D G3DSA:3.40.309.10 262 449 4.9E-58 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RR42_RS21165 69c8a07158d95d59d460389f49d5facf 197 Pfam PF07364 Metallopeptidase family M81 90 197 4.2E-33 T 23-04-2016 IPR015995 Microcystin LR degradation protein MlrC, N-terminal RR42_RS01395 ca67068b5f6c8df2382ea41f2fb36744 255 PANTHER PTHR12124:SF44 40 255 1.4E-19 T 23-04-2016 RR42_RS01395 ca67068b5f6c8df2382ea41f2fb36744 255 Pfam PF01927 Mut7-C RNAse domain 102 245 1.0E-47 T 23-04-2016 IPR002782 Mut7-C RNAse domain RR42_RS01395 ca67068b5f6c8df2382ea41f2fb36744 255 Pfam PF14451 Mut7-C ubiquitin 8 87 3.8E-37 T 23-04-2016 IPR027798 Ubiquitin Mut7-C domain RR42_RS01395 ca67068b5f6c8df2382ea41f2fb36744 255 SUPERFAMILY SSF54285 26 82 4.67E-7 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RR42_RS01395 ca67068b5f6c8df2382ea41f2fb36744 255 PANTHER PTHR12124 40 255 1.4E-19 T 23-04-2016 RR42_RS01395 ca67068b5f6c8df2382ea41f2fb36744 255 Gene3D G3DSA:3.10.20.30 34 81 2.2E-8 T 23-04-2016 IPR012675 Beta-grasp domain RR42_RS09470 2872cdeecd216002beb6ad5b97d90d05 314 Pfam PF00294 pfkB family carbohydrate kinase 6 305 5.2E-57 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB RR42_RS09470 2872cdeecd216002beb6ad5b97d90d05 314 PANTHER PTHR10584 1 311 1.7E-109 T 23-04-2016 RR42_RS09470 2872cdeecd216002beb6ad5b97d90d05 314 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 257 270 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RR42_RS09470 2872cdeecd216002beb6ad5b97d90d05 314 SUPERFAMILY SSF53613 5 308 5.14E-83 T 23-04-2016 IPR029056 Ribokinase-like RR42_RS09470 2872cdeecd216002beb6ad5b97d90d05 314 Gene3D G3DSA:3.40.1190.20 2 309 2.9E-89 T 23-04-2016 IPR029056 Ribokinase-like RR42_RS09470 2872cdeecd216002beb6ad5b97d90d05 314 PANTHER PTHR10584:SF186 1 311 1.7E-109 T 23-04-2016 RR42_RS01720 44a44a9bc77e42344683222b68221d9a 184 SUPERFAMILY SSF52833 43 182 2.12E-39 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS01720 44a44a9bc77e42344683222b68221d9a 184 PANTHER PTHR10681 47 177 1.8E-29 T 23-04-2016 RR42_RS01720 44a44a9bc77e42344683222b68221d9a 184 Gene3D G3DSA:3.40.30.10 18 182 2.1E-47 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS01720 44a44a9bc77e42344683222b68221d9a 184 PANTHER PTHR10681:SF107 47 177 1.8E-29 T 23-04-2016 RR42_RS01720 44a44a9bc77e42344683222b68221d9a 184 Pfam PF08534 Redoxin 44 170 4.3E-27 T 23-04-2016 IPR013740 Redoxin GO:0016491 RR42_RS01595 3ed2a08d7324773cc129d3fefd3b3b8a 112 SUPERFAMILY SSF51182 11 78 5.61E-6 T 23-04-2016 IPR011051 RmlC-like cupin domain RR42_RS01595 3ed2a08d7324773cc129d3fefd3b3b8a 112 Pfam PF11142 Protein of unknown function (DUF2917) 11 65 1.2E-20 T 23-04-2016 IPR021317 Protein of unknown function DUF2917 RR42_RS17435 7a51cd0d8c5184866d9613425f40cbb4 463 SUPERFAMILY SSF53335 262 428 6.52E-17 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS17435 7a51cd0d8c5184866d9613425f40cbb4 463 Pfam PF13649 Methyltransferase domain 288 401 4.8E-9 T 23-04-2016 RR42_RS17435 7a51cd0d8c5184866d9613425f40cbb4 463 Gene3D G3DSA:3.40.50.150 264 424 1.3E-9 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS16360 d2d3957410b0c173fb62603e3978bf90 119 PANTHER PTHR35604 16 107 7.4E-17 T 23-04-2016 RR42_RS16360 d2d3957410b0c173fb62603e3978bf90 119 PANTHER PTHR35604:SF2 16 107 7.4E-17 T 23-04-2016 RR42_RS16360 d2d3957410b0c173fb62603e3978bf90 119 Pfam PF05598 Transposase domain (DUF772) 32 83 3.2E-8 T 23-04-2016 IPR008490 Transposase InsH, N-terminal RR42_RS03090 476118d4633af3cb4f27af560b29e64c 224 Pfam PF11136 Protein of unknown function (DUF2889) 13 137 3.1E-43 T 23-04-2016 IPR021312 Protein of unknown function DUF2889 RR42_RS10340 87c2a724bc7c87b610e07dbb78b0e844 266 SUPERFAMILY SSF48008 98 231 2.46E-20 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS10340 87c2a724bc7c87b610e07dbb78b0e844 266 Gene3D G3DSA:1.20.120.530 96 230 1.6E-21 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS10340 87c2a724bc7c87b610e07dbb78b0e844 266 SUPERFAMILY SSF46785 24 100 8.52E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS10340 87c2a724bc7c87b610e07dbb78b0e844 266 SMART SM00345 34 92 1.3E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS10340 87c2a724bc7c87b610e07dbb78b0e844 266 Gene3D G3DSA:1.10.10.10 21 92 2.3E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS10340 87c2a724bc7c87b610e07dbb78b0e844 266 SMART SM00895 102 231 5.8E-17 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS10340 87c2a724bc7c87b610e07dbb78b0e844 266 Pfam PF00392 Bacterial regulatory proteins, gntR family 31 88 1.8E-13 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS10340 87c2a724bc7c87b610e07dbb78b0e844 266 Pfam PF07729 FCD domain 102 227 1.1E-19 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS10340 87c2a724bc7c87b610e07dbb78b0e844 266 PANTHER PTHR11751 27 118 1.1E-17 T 23-04-2016 RR42_RS07275 296aac09416e786d04db806393039ac0 504 SUPERFAMILY SSF100950 3 222 1.71E-75 T 23-04-2016 RR42_RS07275 296aac09416e786d04db806393039ac0 504 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 13 494 4.9E-228 T 23-04-2016 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 RR42_RS07275 296aac09416e786d04db806393039ac0 504 PANTHER PTHR21432 1 494 3.1E-255 T 23-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 RR42_RS07275 296aac09416e786d04db806393039ac0 504 PANTHER PTHR21432:SF10 1 494 3.1E-255 T 23-04-2016 RR42_RS07275 296aac09416e786d04db806393039ac0 504 SUPERFAMILY SSF100950 227 494 5.71E-83 T 23-04-2016 RR42_RS07275 296aac09416e786d04db806393039ac0 504 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 12 215 2.4E-30 T 23-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 RR42_RS07275 296aac09416e786d04db806393039ac0 504 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 321 463 4.7E-41 T 23-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain RR42_RS07275 296aac09416e786d04db806393039ac0 504 Gene3D G3DSA:3.40.1080.10 12 220 2.7E-44 T 23-04-2016 RR42_RS07275 296aac09416e786d04db806393039ac0 504 Gene3D G3DSA:3.40.810.20 227 490 1.6E-80 T 23-04-2016 RR42_RS04810 736e68637252f3dcd80923d41da7db52 238 SUPERFAMILY SSF161098 36 220 2.62E-37 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS04810 736e68637252f3dcd80923d41da7db52 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 226 1.4E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS04810 736e68637252f3dcd80923d41da7db52 238 Gene3D G3DSA:1.10.3720.10 30 219 8.4E-28 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS04810 736e68637252f3dcd80923d41da7db52 238 PANTHER PTHR30151 25 234 3.4E-68 T 23-04-2016 RR42_RS04810 736e68637252f3dcd80923d41da7db52 238 PANTHER PTHR30151:SF23 25 234 3.4E-68 T 23-04-2016 RR42_RS10065 f0d467084177fdf81d828601c0764a69 361 Gene3D G3DSA:1.10.620.20 25 254 9.6E-22 T 23-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 RR42_RS10065 f0d467084177fdf81d828601c0764a69 361 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 34 305 1.1E-21 T 23-04-2016 IPR025859 P-aminobenzoate N-oxygenase AurF RR42_RS10065 f0d467084177fdf81d828601c0764a69 361 SUPERFAMILY SSF47240 89 318 1.15E-69 T 23-04-2016 IPR009078 Ferritin-like superfamily RR42_RS19305 d2d1e4bbfac6167acbbb077675e5d0a1 125 PIRSF PIRSF002133 1 124 2.3E-54 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19305 d2d1e4bbfac6167acbbb077675e5d0a1 125 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19305 d2d1e4bbfac6167acbbb077675e5d0a1 125 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.729 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RR42_RS19305 d2d1e4bbfac6167acbbb077675e5d0a1 125 PRINTS PR01034 Ribosomal protein S12 signature 77 94 5.2E-61 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RR42_RS19305 d2d1e4bbfac6167acbbb077675e5d0a1 125 PRINTS PR01034 Ribosomal protein S12 signature 27 42 5.2E-61 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RR42_RS19305 d2d1e4bbfac6167acbbb077675e5d0a1 125 PRINTS PR01034 Ribosomal protein S12 signature 58 77 5.2E-61 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RR42_RS19305 d2d1e4bbfac6167acbbb077675e5d0a1 125 PRINTS PR01034 Ribosomal protein S12 signature 110 122 5.2E-61 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RR42_RS19305 d2d1e4bbfac6167acbbb077675e5d0a1 125 PRINTS PR01034 Ribosomal protein S12 signature 94 110 5.2E-61 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RR42_RS19305 d2d1e4bbfac6167acbbb077675e5d0a1 125 PRINTS PR01034 Ribosomal protein S12 signature 42 57 5.2E-61 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RR42_RS19305 d2d1e4bbfac6167acbbb077675e5d0a1 125 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 4.4E-71 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RR42_RS19305 d2d1e4bbfac6167acbbb077675e5d0a1 125 Gene3D G3DSA:2.40.50.140 1 123 4.5E-66 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS19305 d2d1e4bbfac6167acbbb077675e5d0a1 125 Pfam PF00164 Ribosomal protein S12/S23 5 123 8.8E-44 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19305 d2d1e4bbfac6167acbbb077675e5d0a1 125 PANTHER PTHR11652 1 116 1.8E-75 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS19305 d2d1e4bbfac6167acbbb077675e5d0a1 125 SUPERFAMILY SSF50249 2 123 2.83E-52 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS01390 2567672e69d9254b3de05bfcfc6c47ec 120 SUPERFAMILY SSF159894 8 112 3.66E-28 T 23-04-2016 RR42_RS01390 2567672e69d9254b3de05bfcfc6c47ec 120 Gene3D G3DSA:3.30.1460.30 7 113 7.8E-33 T 23-04-2016 IPR007076 TfoX, N-terminal RR42_RS01390 2567672e69d9254b3de05bfcfc6c47ec 120 Pfam PF04993 TfoX N-terminal domain 22 110 6.2E-30 T 23-04-2016 IPR007076 TfoX, N-terminal RR42_RS16945 ffb5f45c8af89e0c82e2daaf22500254 326 Gene3D G3DSA:3.40.50.720 137 268 1.5E-12 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS16945 ffb5f45c8af89e0c82e2daaf22500254 326 PANTHER PTHR10366 14 105 4.8E-30 T 23-04-2016 RR42_RS16945 ffb5f45c8af89e0c82e2daaf22500254 326 PANTHER PTHR10366 136 326 4.8E-30 T 23-04-2016 RR42_RS16945 ffb5f45c8af89e0c82e2daaf22500254 326 Pfam PF02254 TrkA-N domain 16 71 4.8E-5 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RR42_RS16945 ffb5f45c8af89e0c82e2daaf22500254 326 Gene3D G3DSA:3.40.50.720 10 79 7.1E-9 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS16945 ffb5f45c8af89e0c82e2daaf22500254 326 SUPERFAMILY SSF51735 15 319 1.73E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS16945 ffb5f45c8af89e0c82e2daaf22500254 326 Pfam PF04321 RmlD substrate binding domain 139 291 6.8E-6 T 23-04-2016 IPR029903 RmlD-like substrate binding domain RR42_RS16945 ffb5f45c8af89e0c82e2daaf22500254 326 PANTHER PTHR10366:SF430 14 105 4.8E-30 T 23-04-2016 RR42_RS16945 ffb5f45c8af89e0c82e2daaf22500254 326 PANTHER PTHR10366:SF430 136 326 4.8E-30 T 23-04-2016 RR42_RS08725 73ee19f3eb48ddfc65bc84930ee7ecda 134 Pfam PF12680 SnoaL-like domain 16 113 5.7E-11 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain RR42_RS08725 73ee19f3eb48ddfc65bc84930ee7ecda 134 SUPERFAMILY SSF54427 9 128 2.24E-19 T 23-04-2016 IPR032710 NTF2-like domain RR42_RS08725 73ee19f3eb48ddfc65bc84930ee7ecda 134 Gene3D G3DSA:3.10.450.50 1 129 2.9E-28 T 23-04-2016 IPR032710 NTF2-like domain RR42_RS17525 89e39de85259803f76f8255696886e93 140 PIRSF PIRSF004638 1 140 3.8E-51 T 23-04-2016 IPR005265 Uncharacterised protein family UPF0093 RR42_RS17525 89e39de85259803f76f8255696886e93 140 PANTHER PTHR40255 1 140 5.0E-42 T 23-04-2016 RR42_RS17525 89e39de85259803f76f8255696886e93 140 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 140 1.9E-45 T 23-04-2016 IPR005265 Uncharacterised protein family UPF0093 RR42_RS10870 4b6ebd39590d617b98b354861b84a524 200 SUPERFAMILY SSF52218 1 199 2.58E-48 T 23-04-2016 IPR029039 Flavoprotein-like domain RR42_RS10870 4b6ebd39590d617b98b354861b84a524 200 PANTHER PTHR10204:SF37 1 199 2.6E-61 T 23-04-2016 RR42_RS10870 4b6ebd39590d617b98b354861b84a524 200 Pfam PF02525 Flavodoxin-like fold 1 196 4.1E-43 T 23-04-2016 IPR003680 Flavodoxin-like fold RR42_RS10870 4b6ebd39590d617b98b354861b84a524 200 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 199 29.215 T 23-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 RR42_RS10870 4b6ebd39590d617b98b354861b84a524 200 PANTHER PTHR10204 1 199 2.6E-61 T 23-04-2016 RR42_RS10870 4b6ebd39590d617b98b354861b84a524 200 Gene3D G3DSA:3.40.50.360 1 199 1.9E-55 T 23-04-2016 IPR029039 Flavoprotein-like domain RR42_RS20310 6ce2771e8f0efec346392e1ba26cc78d 70 Pfam PF00403 Heavy-metal-associated domain 4 60 3.7E-13 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RR42_RS20310 6ce2771e8f0efec346392e1ba26cc78d 70 SUPERFAMILY SSF55008 2 62 3.01E-16 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RR42_RS20310 6ce2771e8f0efec346392e1ba26cc78d 70 Gene3D G3DSA:3.30.70.100 1 62 2.1E-21 T 23-04-2016 RR42_RS37965 baa9c6938508e33d8b8e46b7747ba6eb 141 PANTHER PTHR24093 2 141 7.6E-26 T 23-04-2016 RR42_RS37965 baa9c6938508e33d8b8e46b7747ba6eb 141 Gene3D G3DSA:2.70.150.10 11 114 4.0E-19 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RR42_RS37965 baa9c6938508e33d8b8e46b7747ba6eb 141 PANTHER PTHR24093:SF332 2 141 7.6E-26 T 23-04-2016 RR42_RS37965 baa9c6938508e33d8b8e46b7747ba6eb 141 Pfam PF00122 E1-E2 ATPase 1 140 4.6E-30 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RR42_RS37965 baa9c6938508e33d8b8e46b7747ba6eb 141 SUPERFAMILY SSF81653 18 114 2.48E-20 T 23-04-2016 RR42_RS05220 d6739a0ccbf4686031339871224e7370 370 Pfam PF00355 Rieske [2Fe-2S] domain 6 88 3.9E-19 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RR42_RS05220 d6739a0ccbf4686031339871224e7370 370 SUPERFAMILY SSF50022 2 113 1.44E-32 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RR42_RS05220 d6739a0ccbf4686031339871224e7370 370 Gene3D G3DSA:2.102.10.10 4 117 1.6E-32 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RR42_RS05220 d6739a0ccbf4686031339871224e7370 370 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 46 68 - T 23-04-2016 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 RR42_RS05220 d6739a0ccbf4686031339871224e7370 370 PANTHER PTHR21266 1 325 7.9E-61 T 23-04-2016 RR42_RS05220 d6739a0ccbf4686031339871224e7370 370 SUPERFAMILY SSF55961 106 326 5.49E-30 T 23-04-2016 RR42_RS05220 d6739a0ccbf4686031339871224e7370 370 PANTHER PTHR21266:SF19 1 325 7.9E-61 T 23-04-2016 RR42_RS01635 0f7481cca83f168b5f93b6f0d0e63b7b 304 PANTHER PTHR11795:SF398 1 304 2.9E-68 T 23-04-2016 RR42_RS01635 0f7481cca83f168b5f93b6f0d0e63b7b 304 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 270 4.5E-30 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RR42_RS01635 0f7481cca83f168b5f93b6f0d0e63b7b 304 PANTHER PTHR11795 1 304 2.9E-68 T 23-04-2016 RR42_RS20370 ce906d78cd309f27019654e782063a6e 105 PANTHER PTHR12599:SF7 6 102 2.3E-49 T 23-04-2016 RR42_RS20370 ce906d78cd309f27019654e782063a6e 105 PANTHER PTHR12599 6 102 2.3E-49 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RR42_RS20370 ce906d78cd309f27019654e782063a6e 105 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 6 99 24.365 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RR42_RS20370 ce906d78cd309f27019654e782063a6e 105 Gene3D G3DSA:3.30.1360.20 6 100 6.0E-37 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RR42_RS20370 ce906d78cd309f27019654e782063a6e 105 SUPERFAMILY SSF55248 8 99 6.15E-35 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RR42_RS20370 ce906d78cd309f27019654e782063a6e 105 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 8 97 8.2E-32 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RR42_RS19710 04b5e7c05d6777a831f1e545796b07e1 135 Pfam PF01022 Bacterial regulatory protein, arsR family 33 77 5.0E-11 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RR42_RS19710 04b5e7c05d6777a831f1e545796b07e1 135 SMART SM00418 25 100 2.1E-17 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RR42_RS19710 04b5e7c05d6777a831f1e545796b07e1 135 Gene3D G3DSA:1.10.10.10 11 101 3.0E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19710 04b5e7c05d6777a831f1e545796b07e1 135 SUPERFAMILY SSF46785 16 100 5.97E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19710 04b5e7c05d6777a831f1e545796b07e1 135 PANTHER PTHR33154 1 115 1.2E-19 T 23-04-2016 RR42_RS19710 04b5e7c05d6777a831f1e545796b07e1 135 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 3.7E-12 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RR42_RS19710 04b5e7c05d6777a831f1e545796b07e1 135 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 74 89 3.7E-12 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RR42_RS19710 04b5e7c05d6777a831f1e545796b07e1 135 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 42 3.7E-12 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RR42_RS17050 1d14a4cb62260af5ef63812f9e89654d 218 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 192 1.7E-72 T 23-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 RR42_RS17050 1d14a4cb62260af5ef63812f9e89654d 218 Gene3D G3DSA:3.40.50.170 1 193 4.0E-70 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RR42_RS17050 1d14a4cb62260af5ef63812f9e89654d 218 PANTHER PTHR10520 1 194 5.3E-99 T 23-04-2016 RR42_RS17050 1d14a4cb62260af5ef63812f9e89654d 218 SUPERFAMILY SSF53328 2 193 7.72E-65 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RR42_RS17050 1d14a4cb62260af5ef63812f9e89654d 218 Pfam PF00551 Formyl transferase 2 182 3.6E-57 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RR42_RS17050 1d14a4cb62260af5ef63812f9e89654d 218 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 30.859 T 23-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 RR42_RS17885 5870a4284ccc04992a216c4eab7884bc 310 Pfam PF01578 Cytochrome C assembly protein 97 306 4.5E-24 T 23-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RR42_RS17885 5870a4284ccc04992a216c4eab7884bc 310 PANTHER PTHR38034 55 308 4.2E-34 T 23-04-2016 RR42_RS00655 52698f91f81c6b2b76f9be6304fea8fd 245 PANTHER PTHR41293:SF1 2 242 9.8E-96 T 23-04-2016 RR42_RS00655 52698f91f81c6b2b76f9be6304fea8fd 245 Pfam PF06149 Protein of unknown function (DUF969) 7 223 3.0E-86 T 23-04-2016 IPR010374 Protein of unknown function DUF969 RR42_RS00655 52698f91f81c6b2b76f9be6304fea8fd 245 PANTHER PTHR41293 2 242 9.8E-96 T 23-04-2016 RR42_RS02100 92baa4ae3d07c404f6b314fba3e4ba56 208 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 14 197 2.2E-48 T 23-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 RR42_RS02100 92baa4ae3d07c404f6b314fba3e4ba56 208 Gene3D G3DSA:2.60.450.10 101 192 5.2E-6 T 23-04-2016 RR42_RS02100 92baa4ae3d07c404f6b314fba3e4ba56 208 PANTHER PTHR37481 9 203 5.7E-17 T 23-04-2016 RR42_RS02100 92baa4ae3d07c404f6b314fba3e4ba56 208 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 18 197 7.0E-41 T 23-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related RR42_RS07455 f240b4d25aed3a4b6ccd3338a9fb35ca 323 Gene3D G3DSA:3.40.50.2300 30 156 6.0E-55 T 23-04-2016 RR42_RS07455 f240b4d25aed3a4b6ccd3338a9fb35ca 323 SUPERFAMILY SSF53822 37 284 9.11E-17 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RR42_RS07455 f240b4d25aed3a4b6ccd3338a9fb35ca 323 PANTHER PTHR35271 15 323 1.2E-69 T 23-04-2016 RR42_RS07455 f240b4d25aed3a4b6ccd3338a9fb35ca 323 Pfam PF04392 ABC transporter substrate binding protein 31 321 1.4E-105 T 23-04-2016 IPR007487 ABC transporter, substrate-binding protein RR42_RS07455 f240b4d25aed3a4b6ccd3338a9fb35ca 323 Gene3D G3DSA:3.40.50.2300 157 287 1.2E-51 T 23-04-2016 RR42_RS16790 75e8c520c900f8cd16f7709cc1654323 266 Gene3D G3DSA:1.10.12.10 208 260 7.4E-15 T 23-04-2016 IPR014748 Crontonase, C-terminal RR42_RS16790 75e8c520c900f8cd16f7709cc1654323 266 SUPERFAMILY SSF52096 3 260 1.96E-62 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS16790 75e8c520c900f8cd16f7709cc1654323 266 PANTHER PTHR11941 11 259 2.0E-61 T 23-04-2016 RR42_RS16790 75e8c520c900f8cd16f7709cc1654323 266 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 260 7.1E-44 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RR42_RS16790 75e8c520c900f8cd16f7709cc1654323 266 Gene3D G3DSA:3.90.226.10 6 202 2.9E-46 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS20610 f43fd316b4666c5e1882b5abc2abe11f 504 PANTHER PTHR35342 2 503 1.5E-274 T 23-04-2016 RR42_RS20610 f43fd316b4666c5e1882b5abc2abe11f 504 PANTHER PTHR35342:SF3 2 503 1.5E-274 T 23-04-2016 RR42_RS20610 f43fd316b4666c5e1882b5abc2abe11f 504 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 437 4.5E-142 T 23-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane RR42_RS20070 053bdbe42905795e5874c179a92f721a 973 SUPERFAMILY SSF53383 29 455 1.66E-101 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS20070 053bdbe42905795e5874c179a92f721a 973 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 20 970 25.732 T 23-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 RR42_RS20070 053bdbe42905795e5874c179a92f721a 973 Pfam PF02347 Glycine cleavage system P-protein 29 454 1.2E-176 T 23-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 RR42_RS20070 053bdbe42905795e5874c179a92f721a 973 Pfam PF02347 Glycine cleavage system P-protein 462 759 1.7E-10 T 23-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 RR42_RS20070 053bdbe42905795e5874c179a92f721a 973 PANTHER PTHR11773:SF1 9 973 0.0 T 23-04-2016 RR42_RS20070 053bdbe42905795e5874c179a92f721a 973 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 29 964 0.0 T 23-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 RR42_RS20070 053bdbe42905795e5874c179a92f721a 973 PANTHER PTHR11773 9 973 0.0 T 23-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 RR42_RS20070 053bdbe42905795e5874c179a92f721a 973 SUPERFAMILY SSF53383 488 900 2.18E-97 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS20070 053bdbe42905795e5874c179a92f721a 973 SUPERFAMILY SSF53383 943 965 2.18E-97 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS20070 053bdbe42905795e5874c179a92f721a 973 Gene3D G3DSA:3.40.640.10 101 319 4.5E-15 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS20070 053bdbe42905795e5874c179a92f721a 973 Gene3D G3DSA:3.40.640.10 515 751 3.5E-42 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS05445 7072d3cdac650c0fc79c96361512462a 338 PANTHER PTHR21371 1 337 8.3E-186 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RR42_RS05445 7072d3cdac650c0fc79c96361512462a 338 SUPERFAMILY SSF51735 1 182 1.32E-73 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS05445 7072d3cdac650c0fc79c96361512462a 338 SUPERFAMILY SSF48179 183 332 4.25E-71 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RR42_RS05445 7072d3cdac650c0fc79c96361512462a 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 1.7E-132 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RR42_RS05445 7072d3cdac650c0fc79c96361512462a 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 1.2E-65 T 23-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RR42_RS05445 7072d3cdac650c0fc79c96361512462a 338 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 1 328 45.233 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RR42_RS05445 7072d3cdac650c0fc79c96361512462a 338 Gene3D G3DSA:1.10.1040.10 29 325 1.4E-115 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RR42_RS05445 7072d3cdac650c0fc79c96361512462a 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 4.3E-73 T 23-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RR42_RS04110 88fcf1db7b4b871f7cde97b3a31bb64f 152 Pfam PF07811 TadE-like protein 15 57 2.1E-13 T 23-04-2016 IPR012495 TadE-like RR42_RS16155 8279e98379efac8892899dcfbf29e905 164 SUPERFAMILY SSF88697 13 160 9.11E-59 T 23-04-2016 IPR015947 PUA-like domain RR42_RS16155 8279e98379efac8892899dcfbf29e905 164 Gene3D G3DSA:3.10.590.10 15 162 6.8E-29 T 23-04-2016 IPR002740 EVE domain RR42_RS16155 8279e98379efac8892899dcfbf29e905 164 Pfam PF01878 EVE domain 15 159 5.1E-53 T 23-04-2016 IPR002740 EVE domain RR42_RS16155 8279e98379efac8892899dcfbf29e905 164 PANTHER PTHR14087 7 158 4.8E-73 T 23-04-2016 RR42_RS19080 5aa278890b68b339991407842e93ffe4 401 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 162 399 5.6E-75 T 23-04-2016 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 RR42_RS19080 5aa278890b68b339991407842e93ffe4 401 PANTHER PTHR30071:SF5 122 401 9.5E-67 T 23-04-2016 RR42_RS19080 5aa278890b68b339991407842e93ffe4 401 Pfam PF01578 Cytochrome C assembly protein 192 396 4.0E-50 T 23-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RR42_RS19080 5aa278890b68b339991407842e93ffe4 401 PANTHER PTHR30071 122 401 9.5E-67 T 23-04-2016 RR42_RS12055 635d9b99f73687e8bbf522b751b9e22e 161 Pfam PF00583 Acetyltransferase (GNAT) family 56 127 2.4E-11 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RR42_RS12055 635d9b99f73687e8bbf522b751b9e22e 161 SUPERFAMILY SSF55729 12 152 9.59E-27 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS12055 635d9b99f73687e8bbf522b751b9e22e 161 Gene3D G3DSA:3.40.630.30 12 152 5.5E-28 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS12055 635d9b99f73687e8bbf522b751b9e22e 161 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 17 149 4.5E-34 T 23-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 RR42_RS12055 635d9b99f73687e8bbf522b751b9e22e 161 PANTHER PTHR23091 1 152 2.1E-19 T 23-04-2016 RR42_RS11505 4476c54e9317bb6419988a9b1b1d0537 274 TIGRFAM TIGR03861 phenyl_ABC_PedC: alcohol ABC transporter, permease protein 9 262 1.6E-107 T 23-04-2016 IPR022403 Alcohol ABC transporter, permease protein RR42_RS11505 4476c54e9317bb6419988a9b1b1d0537 274 PIRSF PIRSF006648 2 261 5.4E-43 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RR42_RS11505 4476c54e9317bb6419988a9b1b1d0537 274 Pfam PF01061 ABC-2 type transporter 12 231 2.2E-30 T 23-04-2016 IPR013525 ABC-2 type transporter GO:0016020 RR42_RS11505 4476c54e9317bb6419988a9b1b1d0537 274 PRINTS PR00164 ABC-2 type transport system membrane protein signature 30 51 6.3E-5 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RR42_RS11505 4476c54e9317bb6419988a9b1b1d0537 274 PRINTS PR00164 ABC-2 type transport system membrane protein signature 147 171 6.3E-5 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RR42_RS11505 4476c54e9317bb6419988a9b1b1d0537 274 PRINTS PR00164 ABC-2 type transport system membrane protein signature 184 203 6.3E-5 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RR42_RS11505 4476c54e9317bb6419988a9b1b1d0537 274 PANTHER PTHR30294:SF13 10 272 5.2E-76 T 23-04-2016 RR42_RS11505 4476c54e9317bb6419988a9b1b1d0537 274 PANTHER PTHR30294 10 272 5.2E-76 T 23-04-2016 RR42_RS06560 29f0486a937070e9d522ef6c3626ecfd 212 Gene3D G3DSA:3.40.810.20 3 211 2.0E-91 T 23-04-2016 RR42_RS06560 29f0486a937070e9d522ef6c3626ecfd 212 SMART SM00882 6 206 4.2E-80 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RR42_RS06560 29f0486a937070e9d522ef6c3626ecfd 212 SUPERFAMILY SSF100950 3 211 1.55E-70 T 23-04-2016 RR42_RS06560 29f0486a937070e9d522ef6c3626ecfd 212 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 23-04-2016 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 RR42_RS06560 29f0486a937070e9d522ef6c3626ecfd 212 PANTHER PTHR13707 2 210 5.5E-126 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RR42_RS06560 29f0486a937070e9d522ef6c3626ecfd 212 Pfam PF01144 Coenzyme A transferase 7 204 1.1E-39 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RR42_RS06560 29f0486a937070e9d522ef6c3626ecfd 212 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 211 3.7E-96 T 23-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 RR42_RS15270 21aaa32a4f572a4b49776211ec475e56 234 PANTHER PTHR12192 24 220 3.9E-43 T 23-04-2016 IPR006840 ChaC-like protein RR42_RS15270 21aaa32a4f572a4b49776211ec475e56 234 SUPERFAMILY SSF110857 54 166 6.41E-12 T 23-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like RR42_RS15270 21aaa32a4f572a4b49776211ec475e56 234 Pfam PF04752 ChaC-like protein 55 217 5.4E-38 T 23-04-2016 IPR006840 ChaC-like protein RR42_RS15270 21aaa32a4f572a4b49776211ec475e56 234 PANTHER PTHR12192:SF9 24 220 3.9E-43 T 23-04-2016 RR42_RS15270 21aaa32a4f572a4b49776211ec475e56 234 Gene3D G3DSA:3.10.490.10 52 214 2.3E-26 T 23-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like RR42_RS15235 f5cdf0bfdf522f3051d4e7d93b72f281 200 PANTHER PTHR34406 13 200 1.5E-33 T 23-04-2016 RR42_RS15235 f5cdf0bfdf522f3051d4e7d93b72f281 200 PANTHER PTHR34406:SF1 13 200 1.5E-33 T 23-04-2016 RR42_RS15235 f5cdf0bfdf522f3051d4e7d93b72f281 200 Pfam PF04264 YceI-like domain 29 192 1.4E-33 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RR42_RS15235 f5cdf0bfdf522f3051d4e7d93b72f281 200 SUPERFAMILY SSF101874 28 194 5.49E-42 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RR42_RS15235 f5cdf0bfdf522f3051d4e7d93b72f281 200 SMART SM00867 28 193 1.2E-47 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RR42_RS15235 f5cdf0bfdf522f3051d4e7d93b72f281 200 Gene3D G3DSA:2.40.128.110 28 194 1.2E-41 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RR42_RS15505 00b61448b43af8ffa406b3de9de9799b 273 Pfam PF16074 Type IV Pilus-assembly protein W 146 270 3.2E-11 T 23-04-2016 IPR032092 Type IV Pilus-assembly protein W GO:0043683 RR42_RS15505 00b61448b43af8ffa406b3de9de9799b 273 SUPERFAMILY SSF54523 15 132 2.12E-5 T 23-04-2016 RR42_RS15505 00b61448b43af8ffa406b3de9de9799b 273 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS15505 00b61448b43af8ffa406b3de9de9799b 273 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 10 34 6.2E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS17760 dbd9ac1ffdd41bd4068f9daa98641447 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 2.0E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS17760 dbd9ac1ffdd41bd4068f9daa98641447 300 SUPERFAMILY SSF53850 96 298 1.86E-40 T 23-04-2016 RR42_RS17760 dbd9ac1ffdd41bd4068f9daa98641447 300 PANTHER PTHR30537 1 300 2.1E-81 T 23-04-2016 RR42_RS17760 dbd9ac1ffdd41bd4068f9daa98641447 300 Gene3D G3DSA:3.40.190.10 180 264 1.8E-14 T 23-04-2016 RR42_RS17760 dbd9ac1ffdd41bd4068f9daa98641447 300 Pfam PF03466 LysR substrate binding domain 95 295 1.4E-39 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS17760 dbd9ac1ffdd41bd4068f9daa98641447 300 Gene3D G3DSA:3.40.190.10 96 179 1.9E-24 T 23-04-2016 RR42_RS17760 dbd9ac1ffdd41bd4068f9daa98641447 300 Gene3D G3DSA:1.10.10.10 7 87 2.2E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS17760 dbd9ac1ffdd41bd4068f9daa98641447 300 PANTHER PTHR30537:SF26 1 300 2.1E-81 T 23-04-2016 RR42_RS17760 dbd9ac1ffdd41bd4068f9daa98641447 300 SUPERFAMILY SSF46785 7 86 1.77E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS17760 dbd9ac1ffdd41bd4068f9daa98641447 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 1.8E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS17760 dbd9ac1ffdd41bd4068f9daa98641447 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 1.8E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS17760 dbd9ac1ffdd41bd4068f9daa98641447 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 1.8E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS15055 870104005db435f60ad610b5b065c9e3 239 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 45 220 1.9E-44 T 23-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RR42_RS15055 870104005db435f60ad610b5b065c9e3 239 SUPERFAMILY SSF102405 20 217 2.14E-59 T 23-04-2016 RR42_RS15055 870104005db435f60ad610b5b065c9e3 239 PANTHER PTHR31223 1 223 6.5E-89 T 23-04-2016 RR42_RS15055 870104005db435f60ad610b5b065c9e3 239 Gene3D G3DSA:3.40.50.450 23 226 8.3E-65 T 23-04-2016 RR42_RS15055 870104005db435f60ad610b5b065c9e3 239 PANTHER PTHR31223:SF1 1 223 6.5E-89 T 23-04-2016 RR42_RS15055 870104005db435f60ad610b5b065c9e3 239 Pfam PF03641 Possible lysine decarboxylase 87 216 1.0E-32 T 23-04-2016 IPR031100 LOG family RR42_RS14885 d7aee24de2347131736a598a2a6b94bd 174 PANTHER PTHR30173 1 167 4.9E-28 T 23-04-2016 RR42_RS14885 d7aee24de2347131736a598a2a6b94bd 174 Pfam PF08281 Sigma-70, region 4 114 162 9.5E-11 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14885 d7aee24de2347131736a598a2a6b94bd 174 Gene3D G3DSA:1.10.10.10 109 162 8.2E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS14885 d7aee24de2347131736a598a2a6b94bd 174 SUPERFAMILY SSF88659 87 168 1.33E-10 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14885 d7aee24de2347131736a598a2a6b94bd 174 PANTHER PTHR30173:SF30 1 167 4.9E-28 T 23-04-2016 RR42_RS14885 d7aee24de2347131736a598a2a6b94bd 174 Gene3D G3DSA:1.10.1740.10 9 103 4.7E-11 T 23-04-2016 RR42_RS14885 d7aee24de2347131736a598a2a6b94bd 174 Pfam PF04542 Sigma-70 region 2 17 82 4.1E-9 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14885 d7aee24de2347131736a598a2a6b94bd 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 163 1.0E-17 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS14885 d7aee24de2347131736a598a2a6b94bd 174 SUPERFAMILY SSF88946 8 97 1.41E-12 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RR42_RS02560 087e97561ca8fe654fa56fff959243d0 162 Pfam PF05995 Cysteine dioxygenase type I 43 144 5.5E-14 T 23-04-2016 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|UniPathway: UPA00012 RR42_RS02560 087e97561ca8fe654fa56fff959243d0 162 SUPERFAMILY SSF51182 30 149 3.26E-35 T 23-04-2016 IPR011051 RmlC-like cupin domain RR42_RS02560 087e97561ca8fe654fa56fff959243d0 162 Gene3D G3DSA:2.60.120.10 34 150 1.9E-34 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS02560 087e97561ca8fe654fa56fff959243d0 162 PANTHER PTHR12918 45 144 1.3E-13 T 23-04-2016 RR42_RS13325 26d16a124d0e1a3160f68344c366b625 87 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 24.462 T 23-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS13325 26d16a124d0e1a3160f68344c366b625 87 PRINTS PR01249 Ribosomal protein L31 signature 59 77 1.3E-18 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS13325 26d16a124d0e1a3160f68344c366b625 87 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.3E-18 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS13325 26d16a124d0e1a3160f68344c366b625 87 PRINTS PR01249 Ribosomal protein L31 signature 44 59 1.3E-18 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS13325 26d16a124d0e1a3160f68344c366b625 87 PANTHER PTHR33280 1 78 7.0E-33 T 23-04-2016 RR42_RS13325 26d16a124d0e1a3160f68344c366b625 87 Pfam PF01197 Ribosomal protein L31 1 78 1.3E-30 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS13325 26d16a124d0e1a3160f68344c366b625 87 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 69 - T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS13325 26d16a124d0e1a3160f68344c366b625 87 SUPERFAMILY SSF143800 1 78 1.37E-23 T 23-04-2016 RR42_RS13325 26d16a124d0e1a3160f68344c366b625 87 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 1.5E-22 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS07425 11e1c57b4735f5c7e52a166715e43349 261 Pfam PF09339 IclR helix-turn-helix domain 16 65 3.2E-14 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RR42_RS07425 11e1c57b4735f5c7e52a166715e43349 261 SMART SM00346 13 102 5.3E-23 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RR42_RS07425 11e1c57b4735f5c7e52a166715e43349 261 PANTHER PTHR30136:SF7 1 256 5.0E-59 T 23-04-2016 RR42_RS07425 11e1c57b4735f5c7e52a166715e43349 261 PANTHER PTHR30136 1 256 5.0E-59 T 23-04-2016 RR42_RS07425 11e1c57b4735f5c7e52a166715e43349 261 SUPERFAMILY SSF46785 13 84 5.46E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS07425 11e1c57b4735f5c7e52a166715e43349 261 Gene3D G3DSA:1.10.10.10 12 82 3.0E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS07425 11e1c57b4735f5c7e52a166715e43349 261 SUPERFAMILY SSF55781 70 255 1.31E-42 T 23-04-2016 IPR029016 GAF domain-like RR42_RS07425 11e1c57b4735f5c7e52a166715e43349 261 Gene3D G3DSA:3.30.450.40 83 257 3.8E-49 T 23-04-2016 IPR029016 GAF domain-like RR42_RS07425 11e1c57b4735f5c7e52a166715e43349 261 Pfam PF01614 Bacterial transcriptional regulator 131 251 1.3E-32 T 23-04-2016 IPR014757 Transcription regulator IclR, C-terminal RR42_RS04835 4735b52c04d2c024d3dfe62a7efe766d 248 Pfam PF07729 FCD domain 109 232 5.2E-28 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS04835 4735b52c04d2c024d3dfe62a7efe766d 248 SMART SM00345 23 82 1.2E-25 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS04835 4735b52c04d2c024d3dfe62a7efe766d 248 SUPERFAMILY SSF48008 105 241 8.11E-32 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS04835 4735b52c04d2c024d3dfe62a7efe766d 248 SUPERFAMILY SSF46785 15 86 6.93E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS04835 4735b52c04d2c024d3dfe62a7efe766d 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 82 2.8E-24 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS04835 4735b52c04d2c024d3dfe62a7efe766d 248 SMART SM00895 108 233 1.2E-26 T 23-04-2016 IPR011711 GntR, C-terminal RR42_RS04835 4735b52c04d2c024d3dfe62a7efe766d 248 PANTHER PTHR11751 21 89 1.3E-29 T 23-04-2016 RR42_RS04835 4735b52c04d2c024d3dfe62a7efe766d 248 PANTHER PTHR11751 106 124 1.3E-29 T 23-04-2016 RR42_RS04835 4735b52c04d2c024d3dfe62a7efe766d 248 Gene3D G3DSA:1.10.10.10 15 88 2.1E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS04835 4735b52c04d2c024d3dfe62a7efe766d 248 Gene3D G3DSA:1.20.120.530 103 242 1.5E-34 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RR42_RS04835 4735b52c04d2c024d3dfe62a7efe766d 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 1.4E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS04835 4735b52c04d2c024d3dfe62a7efe766d 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 1.4E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RR42_RS17400 a7e3ce3182408539baf5b39645543de2 383 PANTHER PTHR21148:SF26 1 373 5.1E-173 T 23-04-2016 RR42_RS17400 a7e3ce3182408539baf5b39645543de2 383 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 2 365 56.548 T 23-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RR42_RS17400 a7e3ce3182408539baf5b39645543de2 383 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 366 1.3E-90 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RR42_RS17400 a7e3ce3182408539baf5b39645543de2 383 SUPERFAMILY SSF51713 1 368 2.09E-157 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RR42_RS17400 a7e3ce3182408539baf5b39645543de2 383 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 4 369 5.3E-157 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RR42_RS17400 a7e3ce3182408539baf5b39645543de2 383 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 4 369 4.2E-165 T 23-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RR42_RS17400 a7e3ce3182408539baf5b39645543de2 383 Gene3D G3DSA:3.20.20.105 1 370 6.7E-166 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RR42_RS17400 a7e3ce3182408539baf5b39645543de2 383 PANTHER PTHR21148 1 373 5.1E-173 T 23-04-2016 RR42_RS16180 a64a29b6b46c3df7c4ebf06f09cd9464 328 PANTHER PTHR30349 14 287 2.2E-92 T 23-04-2016 RR42_RS16180 a64a29b6b46c3df7c4ebf06f09cd9464 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 324 2.0E-90 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS16180 a64a29b6b46c3df7c4ebf06f09cd9464 328 PIRSF PIRSF017082 1 328 2.4E-78 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS16180 a64a29b6b46c3df7c4ebf06f09cd9464 328 PANTHER PTHR30349:SF16 14 287 2.2E-92 T 23-04-2016 RR42_RS16180 a64a29b6b46c3df7c4ebf06f09cd9464 328 SUPERFAMILY SSF53850 114 290 7.72E-13 T 23-04-2016 RR42_RS07005 2b0122463bb0fdca6356c780b915f4d0 219 SUPERFAMILY SSF143081 2 207 4.45E-54 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RR42_RS07005 2b0122463bb0fdca6356c780b915f4d0 219 PANTHER PTHR13604 32 204 1.0E-19 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RR42_RS07005 2b0122463bb0fdca6356c780b915f4d0 219 Pfam PF02586 SOS response associated peptidase (SRAP) 31 206 5.3E-27 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RR42_RS07005 2b0122463bb0fdca6356c780b915f4d0 219 Gene3D G3DSA:3.90.1680.10 30 209 7.6E-34 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RR42_RS02955 77bce265e86cc40c246e8005f913e909 104 Hamap MF_00710 Malonate decarboxylase acyl carrier protein [mdcC]. 1 100 47.496 T 23-04-2016 IPR009662 Malonate decarboxylase delta subunit RR42_RS02955 77bce265e86cc40c246e8005f913e909 104 ProDom PD015450 MALONATE DECARBOXYLASE SUBUNIT DELTA ACYL CARRIER DECARBOXYLASE PLASMID DIRECT SEQUENCING 1 94 2.0E-34 T 23-04-2016 IPR009662 Malonate decarboxylase delta subunit RR42_RS02955 77bce265e86cc40c246e8005f913e909 104 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 16 95 1.3E-23 T 23-04-2016 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein RR42_RS02955 77bce265e86cc40c246e8005f913e909 104 TIGRFAM TIGR03130 malonate_delta: malonate decarboxylase acyl carrier protein 2 95 1.5E-35 T 23-04-2016 IPR009662 Malonate decarboxylase delta subunit RR42_RS12890 833c3d320c722c4e1cf9e8e6ecb5fd2f 499 Gene3D G3DSA:1.10.1060.10 234 291 2.5E-7 T 23-04-2016 RR42_RS12890 833c3d320c722c4e1cf9e8e6ecb5fd2f 499 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 283 294 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RR42_RS12890 833c3d320c722c4e1cf9e8e6ecb5fd2f 499 Pfam PF12801 4Fe-4S binding domain 106 147 7.2E-11 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RR42_RS12890 833c3d320c722c4e1cf9e8e6ecb5fd2f 499 PANTHER PTHR24960 12 410 2.6E-128 T 23-04-2016 RR42_RS12890 833c3d320c722c4e1cf9e8e6ecb5fd2f 499 Pfam PF13746 4Fe-4S dicluster domain 230 336 7.7E-43 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RR42_RS12890 833c3d320c722c4e1cf9e8e6ecb5fd2f 499 SUPERFAMILY SSF54862 184 378 1.32E-32 T 23-04-2016 RR42_RS12890 833c3d320c722c4e1cf9e8e6ecb5fd2f 499 SUPERFAMILY SSF54862 116 138 1.32E-32 T 23-04-2016 RR42_RS12890 833c3d320c722c4e1cf9e8e6ecb5fd2f 499 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 371 496 1.8E-23 T 23-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain RR42_RS12890 833c3d320c722c4e1cf9e8e6ecb5fd2f 499 Gene3D G3DSA:3.30.70.20 292 336 2.3E-6 T 23-04-2016 RR42_RS12890 833c3d320c722c4e1cf9e8e6ecb5fd2f 499 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 52 478 1.8E-149 T 23-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 RR42_RS12890 833c3d320c722c4e1cf9e8e6ecb5fd2f 499 PANTHER PTHR24960:SF45 12 410 2.6E-128 T 23-04-2016 RR42_RS12890 833c3d320c722c4e1cf9e8e6ecb5fd2f 499 Gene3D G3DSA:2.60.40.10 371 497 4.3E-26 T 23-04-2016 IPR013783 Immunoglobulin-like fold RR42_RS12280 22cf14591a1a621ab9632439b30a333e 291 PANTHER PTHR24220:SF365 26 255 8.0E-113 T 23-04-2016 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB GO:0005215|GO:0005524|GO:0005886|GO:0006810 RR42_RS12280 22cf14591a1a621ab9632439b30a333e 291 Gene3D G3DSA:3.40.50.300 22 227 3.6E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12280 22cf14591a1a621ab9632439b30a333e 291 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS12280 22cf14591a1a621ab9632439b30a333e 291 Pfam PF00005 ABC transporter 40 173 7.5E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS12280 22cf14591a1a621ab9632439b30a333e 291 SMART SM00382 49 223 3.1E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS12280 22cf14591a1a621ab9632439b30a333e 291 SUPERFAMILY SSF52540 25 242 5.86E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS12280 22cf14591a1a621ab9632439b30a333e 291 PANTHER PTHR24220 26 255 8.0E-113 T 23-04-2016 RR42_RS01625 be69bced6dc6de3e5ff6939b5c4d8c36 656 PANTHER PTHR24096:SF151 1 616 1.7E-213 T 23-04-2016 RR42_RS01625 be69bced6dc6de3e5ff6939b5c4d8c36 656 Gene3D G3DSA:3.40.50.980 344 401 4.8E-26 T 23-04-2016 RR42_RS01625 be69bced6dc6de3e5ff6939b5c4d8c36 656 Gene3D G3DSA:3.40.50.980 199 290 4.8E-26 T 23-04-2016 RR42_RS01625 be69bced6dc6de3e5ff6939b5c4d8c36 656 PANTHER PTHR24096 1 616 1.7E-213 T 23-04-2016 RR42_RS01625 be69bced6dc6de3e5ff6939b5c4d8c36 656 ProSitePatterns PS00455 Putative AMP-binding domain signature. 192 203 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS01625 be69bced6dc6de3e5ff6939b5c4d8c36 656 Gene3D G3DSA:3.40.50.980 7 198 2.9E-30 T 23-04-2016 RR42_RS01625 be69bced6dc6de3e5ff6939b5c4d8c36 656 SUPERFAMILY SSF56801 347 611 1.7E-105 T 23-04-2016 RR42_RS01625 be69bced6dc6de3e5ff6939b5c4d8c36 656 SUPERFAMILY SSF56801 7 295 1.7E-105 T 23-04-2016 RR42_RS01625 be69bced6dc6de3e5ff6939b5c4d8c36 656 Pfam PF00501 AMP-binding enzyme 15 477 2.8E-83 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS01625 be69bced6dc6de3e5ff6939b5c4d8c36 656 Gene3D G3DSA:2.30.38.10 413 471 6.3E-15 T 23-04-2016 RR42_RS19630 ff80457a383295ff0e1af69f60fc3cdc 205 PANTHER PTHR30037:SF4 1 204 6.8E-97 T 23-04-2016 RR42_RS19630 ff80457a383295ff0e1af69f60fc3cdc 205 Pfam PF03352 Methyladenine glycosylase 12 189 1.0E-72 T 23-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 RR42_RS19630 ff80457a383295ff0e1af69f60fc3cdc 205 SUPERFAMILY SSF48150 8 192 3.92E-73 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RR42_RS19630 ff80457a383295ff0e1af69f60fc3cdc 205 Gene3D G3DSA:1.10.340.30 8 190 1.6E-75 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RR42_RS19630 ff80457a383295ff0e1af69f60fc3cdc 205 PANTHER PTHR30037 1 204 6.8E-97 T 23-04-2016 RR42_RS09685 4c6a900f8af48a5a7dc8b90004897aed 297 SUPERFAMILY SSF49401 158 297 3.48E-22 T 23-04-2016 IPR008966 Adhesion domain RR42_RS09685 4c6a900f8af48a5a7dc8b90004897aed 297 PANTHER PTHR33420 151 297 2.4E-32 T 23-04-2016 RR42_RS09685 4c6a900f8af48a5a7dc8b90004897aed 297 PANTHER PTHR33420 3 126 2.4E-32 T 23-04-2016 RR42_RS09685 4c6a900f8af48a5a7dc8b90004897aed 297 Gene3D G3DSA:2.60.40.1090 159 297 5.4E-19 T 23-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RR42_RS09685 4c6a900f8af48a5a7dc8b90004897aed 297 PANTHER PTHR33420:SF10 151 297 2.4E-32 T 23-04-2016 RR42_RS09685 4c6a900f8af48a5a7dc8b90004897aed 297 PANTHER PTHR33420:SF10 3 126 2.4E-32 T 23-04-2016 RR42_RS09685 4c6a900f8af48a5a7dc8b90004897aed 297 Pfam PF00419 Fimbrial protein 149 297 1.7E-13 T 23-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RR42_RS20390 61f1a9611c6d65106fed36251f6dee67 92 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 2.6E-14 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RR42_RS20390 61f1a9611c6d65106fed36251f6dee67 92 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 2.6E-14 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RR42_RS20390 61f1a9611c6d65106fed36251f6dee67 92 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 2.6E-14 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RR42_RS20390 61f1a9611c6d65106fed36251f6dee67 92 SMART SM00411 1 91 5.0E-34 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RR42_RS20390 61f1a9611c6d65106fed36251f6dee67 92 Gene3D G3DSA:4.10.520.10 1 92 6.8E-33 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RR42_RS20390 61f1a9611c6d65106fed36251f6dee67 92 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 RR42_RS20390 61f1a9611c6d65106fed36251f6dee67 92 SUPERFAMILY SSF47729 1 91 9.86E-29 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RR42_RS20390 61f1a9611c6d65106fed36251f6dee67 92 PANTHER PTHR33175 1 91 2.8E-35 T 23-04-2016 RR42_RS20390 61f1a9611c6d65106fed36251f6dee67 92 Pfam PF00216 Bacterial DNA-binding protein 1 91 9.2E-29 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RR42_RS07975 1159a271c8edf29c59ce87450e98c31f 444 Pfam PF01425 Amidase 25 433 3.7E-89 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RR42_RS07975 1159a271c8edf29c59ce87450e98c31f 444 PANTHER PTHR11895 7 443 2.4E-115 T 23-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RR42_RS07975 1159a271c8edf29c59ce87450e98c31f 444 Gene3D G3DSA:3.90.1300.10 6 443 1.5E-120 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RR42_RS07975 1159a271c8edf29c59ce87450e98c31f 444 SUPERFAMILY SSF75304 1 443 1.16E-115 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RR42_RS01455 b2fb88baca090095c705fab954c57f79 453 PANTHER PTHR22572:SF115 2 444 6.9E-204 T 23-04-2016 RR42_RS01455 b2fb88baca090095c705fab954c57f79 453 Gene3D G3DSA:3.90.550.10 2 243 8.3E-72 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RR42_RS01455 b2fb88baca090095c705fab954c57f79 453 SUPERFAMILY SSF53448 2 247 6.28E-64 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RR42_RS01455 b2fb88baca090095c705fab954c57f79 453 Gene3D G3DSA:2.160.10.10 252 430 1.3E-45 T 23-04-2016 RR42_RS01455 b2fb88baca090095c705fab954c57f79 453 PANTHER PTHR22572 2 444 6.9E-204 T 23-04-2016 RR42_RS01455 b2fb88baca090095c705fab954c57f79 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 1 447 40.799 T 23-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 RR42_RS01455 b2fb88baca090095c705fab954c57f79 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 2 449 4.3E-186 T 23-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 RR42_RS01455 b2fb88baca090095c705fab954c57f79 453 SUPERFAMILY SSF51161 249 429 3.38E-48 T 23-04-2016 IPR011004 Trimeric LpxA-like RR42_RS01455 b2fb88baca090095c705fab954c57f79 453 Pfam PF12804 MobA-like NTP transferase domain 4 127 6.7E-22 T 23-04-2016 IPR025877 MobA-like NTP transferase RR42_RS01455 b2fb88baca090095c705fab954c57f79 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 262 295 6.9E-5 T 23-04-2016 IPR001451 Hexapeptide repeat RR42_RS01455 b2fb88baca090095c705fab954c57f79 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 390 424 2.0E-6 T 23-04-2016 IPR001451 Hexapeptide repeat RR42_RS01455 b2fb88baca090095c705fab954c57f79 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 320 346 4.5E-5 T 23-04-2016 IPR001451 Hexapeptide repeat RR42_RS33120 21496dcd4a7b7daa17ea06bf27ee1085 181 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 92 167 5.1E-11 T 23-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 RR42_RS33120 21496dcd4a7b7daa17ea06bf27ee1085 181 PANTHER PTHR11061:SF30 86 180 3.6E-21 T 23-04-2016 RR42_RS33120 21496dcd4a7b7daa17ea06bf27ee1085 181 SUPERFAMILY SSF53335 3 180 1.06E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS33120 21496dcd4a7b7daa17ea06bf27ee1085 181 PANTHER PTHR11061 86 180 3.6E-21 T 23-04-2016 RR42_RS33120 21496dcd4a7b7daa17ea06bf27ee1085 181 Gene3D G3DSA:3.40.50.150 73 179 1.1E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS10335 824d31f0571e926e2924bddbde499c04 177 SUPERFAMILY SSF51161 3 169 1.19E-47 T 23-04-2016 IPR011004 Trimeric LpxA-like RR42_RS10335 824d31f0571e926e2924bddbde499c04 177 PANTHER PTHR13061 1 171 6.6E-65 T 23-04-2016 RR42_RS10335 824d31f0571e926e2924bddbde499c04 177 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 60 85 0.14 T 23-04-2016 IPR001451 Hexapeptide repeat RR42_RS10335 824d31f0571e926e2924bddbde499c04 177 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 10 44 3.3E-6 T 23-04-2016 IPR001451 Hexapeptide repeat RR42_RS10335 824d31f0571e926e2924bddbde499c04 177 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 120 3.2E-8 T 23-04-2016 IPR001451 Hexapeptide repeat RR42_RS10335 824d31f0571e926e2924bddbde499c04 177 Gene3D G3DSA:2.160.10.10 5 165 3.4E-45 T 23-04-2016 RR42_RS16485 7a49aee1d01ba60050129b8df531dc92 411 Pfam PF01547 Bacterial extracellular solute-binding protein 29 320 8.9E-27 T 23-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 RR42_RS16485 7a49aee1d01ba60050129b8df531dc92 411 Gene3D G3DSA:3.40.190.10 23 145 8.7E-15 T 23-04-2016 RR42_RS16485 7a49aee1d01ba60050129b8df531dc92 411 Gene3D G3DSA:3.40.190.10 146 333 1.3E-28 T 23-04-2016 RR42_RS16485 7a49aee1d01ba60050129b8df531dc92 411 SUPERFAMILY SSF53850 3 405 3.17E-51 T 23-04-2016 RR42_RS16485 7a49aee1d01ba60050129b8df531dc92 411 PANTHER PTHR30061 6 407 1.9E-48 T 23-04-2016 RR42_RS13465 d4163940d04b1aa17ffac959394a7cec 321 PANTHER PTHR30425:SF1 2 321 4.4E-145 T 23-04-2016 RR42_RS13465 d4163940d04b1aa17ffac959394a7cec 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 310 8.7E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS13465 d4163940d04b1aa17ffac959394a7cec 321 PANTHER PTHR30425 2 321 4.4E-145 T 23-04-2016 RR42_RS13465 d4163940d04b1aa17ffac959394a7cec 321 SUPERFAMILY SSF161098 31 306 3.71E-32 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS13465 d4163940d04b1aa17ffac959394a7cec 321 Gene3D G3DSA:1.10.3720.10 29 317 4.6E-36 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS13465 d4163940d04b1aa17ffac959394a7cec 321 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 21 312 1.6E-88 T 23-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 RR42_RS16170 44bdd6eb780e10bdf2db13c608ea6899 517 Gene3D G3DSA:2.30.38.10 327 414 1.4E-27 T 23-04-2016 RR42_RS16170 44bdd6eb780e10bdf2db13c608ea6899 517 Gene3D G3DSA:3.30.300.30 415 513 4.6E-30 T 23-04-2016 RR42_RS16170 44bdd6eb780e10bdf2db13c608ea6899 517 SUPERFAMILY SSF56801 5 514 7.98E-142 T 23-04-2016 RR42_RS16170 44bdd6eb780e10bdf2db13c608ea6899 517 Gene3D G3DSA:3.40.50.980 168 323 4.4E-41 T 23-04-2016 RR42_RS16170 44bdd6eb780e10bdf2db13c608ea6899 517 PANTHER PTHR24096 1 513 7.4E-196 T 23-04-2016 RR42_RS16170 44bdd6eb780e10bdf2db13c608ea6899 517 PANTHER PTHR24096:SF206 1 513 7.4E-196 T 23-04-2016 RR42_RS16170 44bdd6eb780e10bdf2db13c608ea6899 517 Pfam PF13193 AMP-binding enzyme C-terminal domain 429 504 3.2E-17 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RR42_RS16170 44bdd6eb780e10bdf2db13c608ea6899 517 Pfam PF00501 AMP-binding enzyme 16 420 8.1E-90 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RR42_RS16170 44bdd6eb780e10bdf2db13c608ea6899 517 Gene3D G3DSA:3.40.50.980 8 167 2.4E-32 T 23-04-2016 RR42_RS16170 44bdd6eb780e10bdf2db13c608ea6899 517 ProSitePatterns PS00455 Putative AMP-binding domain signature. 162 173 - T 23-04-2016 IPR020845 AMP-binding, conserved site RR42_RS10470 e3d2fc4ba0b671674f1633b1fe30b2d1 524 Pfam PF02661 Fic/DOC family 238 341 6.4E-11 T 23-04-2016 IPR003812 Fido domain RR42_RS10470 e3d2fc4ba0b671674f1633b1fe30b2d1 524 Gene3D G3DSA:1.10.3290.10 176 456 7.8E-44 T 23-04-2016 IPR003812 Fido domain RR42_RS10470 e3d2fc4ba0b671674f1633b1fe30b2d1 524 SUPERFAMILY SSF140931 221 377 1.12E-16 T 23-04-2016 IPR003812 Fido domain RR42_RS04710 e3c17273c8e6630c09d6cc6fc48eed62 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 1.4E-50 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RR42_RS04710 e3c17273c8e6630c09d6cc6fc48eed62 156 SUPERFAMILY SSF75217 1 153 1.05E-49 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases RR42_RS04710 e3c17273c8e6630c09d6cc6fc48eed62 156 PANTHER PTHR33603:SF1 1 155 1.4E-56 T 23-04-2016 RR42_RS04710 e3c17273c8e6630c09d6cc6fc48eed62 156 PANTHER PTHR33603 1 155 1.4E-56 T 23-04-2016 RR42_RS04710 e3c17273c8e6630c09d6cc6fc48eed62 156 PIRSF PIRSF004505 1 155 5.1E-47 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RR42_RS04710 e3c17273c8e6630c09d6cc6fc48eed62 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 28.849 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RR42_RS04710 e3c17273c8e6630c09d6cc6fc48eed62 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 155 1.8E-47 T 23-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RR42_RS04710 e3c17273c8e6630c09d6cc6fc48eed62 156 Gene3D G3DSA:3.40.1280.10 1 155 9.2E-56 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RR42_RS01715 4fe6e45a8e5e1d8df2f3e72a7c5ef87c 702 Pfam PF00580 UvrD/REP helicase N-terminal domain 28 305 1.5E-55 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RR42_RS01715 4fe6e45a8e5e1d8df2f3e72a7c5ef87c 702 PANTHER PTHR11070:SF3 24 641 3.0E-245 T 23-04-2016 RR42_RS01715 4fe6e45a8e5e1d8df2f3e72a7c5ef87c 702 Gene3D G3DSA:3.40.50.300 26 307 1.3E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01715 4fe6e45a8e5e1d8df2f3e72a7c5ef87c 702 Pfam PF13361 UvrD-like helicase C-terminal domain 313 460 3.8E-19 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RR42_RS01715 4fe6e45a8e5e1d8df2f3e72a7c5ef87c 702 Pfam PF13361 UvrD-like helicase C-terminal domain 573 633 2.7E-17 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RR42_RS01715 4fe6e45a8e5e1d8df2f3e72a7c5ef87c 702 PANTHER PTHR11070 24 641 3.0E-245 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RR42_RS01715 4fe6e45a8e5e1d8df2f3e72a7c5ef87c 702 Gene3D G3DSA:1.10.486.10 424 551 3.7E-8 T 23-04-2016 RR42_RS01715 4fe6e45a8e5e1d8df2f3e72a7c5ef87c 702 SUPERFAMILY SSF52540 23 644 1.57E-126 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01715 4fe6e45a8e5e1d8df2f3e72a7c5ef87c 702 Gene3D G3DSA:3.40.50.300 573 641 1.2E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01715 4fe6e45a8e5e1d8df2f3e72a7c5ef87c 702 Gene3D G3DSA:3.40.50.300 316 423 1.2E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17710 cf8a8e6d1b6be658a7b124097ec1de3a 517 Pfam PF11906 Protein of unknown function (DUF3426) 370 513 3.6E-40 T 23-04-2016 IPR021834 Protein of unknown function DUF3426 RR42_RS17710 cf8a8e6d1b6be658a7b124097ec1de3a 517 Pfam PF13719 zinc-ribbon domain 6 42 7.1E-14 T 23-04-2016 IPR011723 Zinc finger/thioredoxin putative RR42_RS17710 cf8a8e6d1b6be658a7b124097ec1de3a 517 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 7 43 1.9E-13 T 23-04-2016 IPR011723 Zinc finger/thioredoxin putative RR42_RS18440 692680974adda90d0fd550d22348fd23 166 Pfam PF14345 GDYXXLXY protein 13 158 1.8E-32 T 23-04-2016 IPR025833 GDYXXLXY protein RR42_RS17245 028230d4e147372e2c1673c22c5e250a 213 SUPERFAMILY SSF52540 3 203 7.13E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17245 028230d4e147372e2c1673c22c5e250a 213 Gene3D G3DSA:3.40.50.300 6 200 4.0E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS17245 028230d4e147372e2c1673c22c5e250a 213 PANTHER PTHR10513 8 201 1.3E-31 T 23-04-2016 RR42_RS17245 028230d4e147372e2c1673c22c5e250a 213 PIRSF PIRSF000705 1 207 1.2E-47 T 23-04-2016 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 RR42_RS17245 028230d4e147372e2c1673c22c5e250a 213 Pfam PF01712 Deoxynucleoside kinase 8 200 4.4E-29 T 23-04-2016 IPR031314 Deoxynucleoside kinase domain RR42_RS17245 028230d4e147372e2c1673c22c5e250a 213 PANTHER PTHR10513:SF16 8 201 1.3E-31 T 23-04-2016 RR42_RS05300 c6ed6193627c477c8195b8a9840f7b5e 753 PANTHER PTHR32552 1 314 3.2E-42 T 23-04-2016 RR42_RS05300 c6ed6193627c477c8195b8a9840f7b5e 753 PANTHER PTHR32552 330 750 3.2E-42 T 23-04-2016 RR42_RS05300 c6ed6193627c477c8195b8a9840f7b5e 753 Gene3D G3DSA:2.40.170.20 162 750 7.2E-82 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RR42_RS05300 c6ed6193627c477c8195b8a9840f7b5e 753 Gene3D G3DSA:2.170.130.10 20 161 1.6E-10 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RR42_RS05300 c6ed6193627c477c8195b8a9840f7b5e 753 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 159 7.7E-9 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RR42_RS05300 c6ed6193627c477c8195b8a9840f7b5e 753 Pfam PF00593 TonB dependent receptor 464 748 1.2E-29 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RR42_RS05300 c6ed6193627c477c8195b8a9840f7b5e 753 SUPERFAMILY SSF56935 20 750 4.88E-90 T 23-04-2016 RR42_RS07610 4165df7f3a21a9ba98f430518fd677e1 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 23-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RR42_RS07610 4165df7f3a21a9ba98f430518fd677e1 393 PIRSF PIRSF000429 1 393 8.5E-134 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RR42_RS07610 4165df7f3a21a9ba98f430518fd677e1 393 SUPERFAMILY SSF53901 271 392 9.2E-45 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS07610 4165df7f3a21a9ba98f430518fd677e1 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 23-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RR42_RS07610 4165df7f3a21a9ba98f430518fd677e1 393 Pfam PF02803 Thiolase, C-terminal domain 270 392 1.1E-54 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RR42_RS07610 4165df7f3a21a9ba98f430518fd677e1 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 2.1E-151 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RR42_RS07610 4165df7f3a21a9ba98f430518fd677e1 393 Pfam PF00108 Thiolase, N-terminal domain 4 262 1.8E-108 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RR42_RS07610 4165df7f3a21a9ba98f430518fd677e1 393 SUPERFAMILY SSF53901 3 270 6.12E-91 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS07610 4165df7f3a21a9ba98f430518fd677e1 393 Gene3D G3DSA:3.40.47.10 194 276 1.3E-80 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS07610 4165df7f3a21a9ba98f430518fd677e1 393 Gene3D G3DSA:3.40.47.10 3 123 1.3E-80 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS07610 4165df7f3a21a9ba98f430518fd677e1 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 23-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 RR42_RS07610 4165df7f3a21a9ba98f430518fd677e1 393 PANTHER PTHR18919 1 393 2.7E-235 T 23-04-2016 RR42_RS07610 4165df7f3a21a9ba98f430518fd677e1 393 Gene3D G3DSA:3.40.47.10 142 193 4.0E-72 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS07610 4165df7f3a21a9ba98f430518fd677e1 393 Gene3D G3DSA:3.40.47.10 277 392 4.0E-72 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RR42_RS07610 4165df7f3a21a9ba98f430518fd677e1 393 PANTHER PTHR18919:SF95 1 393 2.7E-235 T 23-04-2016 RR42_RS09505 ef020c7933ad3486678bd40e1f9e350c 306 PANTHER PTHR21624 10 281 8.6E-74 T 23-04-2016 RR42_RS09505 ef020c7933ad3486678bd40e1f9e350c 306 Pfam PF04116 Fatty acid hydroxylase superfamily 90 223 6.5E-29 T 23-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 RR42_RS09505 ef020c7933ad3486678bd40e1f9e350c 306 PANTHER PTHR21624:SF1 10 281 8.6E-74 T 23-04-2016 RR42_RS11185 65469405289236a2703bf1cdee6c73a0 222 SUPERFAMILY SSF46689 21 92 1.35E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS11185 65469405289236a2703bf1cdee6c73a0 222 Gene3D G3DSA:1.10.357.10 32 217 9.4E-24 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS11185 65469405289236a2703bf1cdee6c73a0 222 PANTHER PTHR30328 6 213 3.9E-16 T 23-04-2016 RR42_RS11185 65469405289236a2703bf1cdee6c73a0 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 39 78 4.6E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS12750 85ff4d6f4a340d7ec08be2e60ff89d8c 146 Pfam PF14347 Domain of unknown function (DUF4399) 56 146 1.1E-38 T 23-04-2016 IPR025512 Domain of unknown function DUF4399 RR42_RS00375 074d49e6fb7b3d8655aa4edd1957f3ba 432 PANTHER PTHR11662 15 428 1.8E-115 T 23-04-2016 RR42_RS00375 074d49e6fb7b3d8655aa4edd1957f3ba 432 Gene3D G3DSA:1.20.1250.20 236 420 3.2E-26 T 23-04-2016 RR42_RS00375 074d49e6fb7b3d8655aa4edd1957f3ba 432 Pfam PF07690 Major Facilitator Superfamily 26 390 1.5E-50 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RR42_RS00375 074d49e6fb7b3d8655aa4edd1957f3ba 432 PIRSF PIRSF002808 1 431 2.6E-37 T 23-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 RR42_RS00375 074d49e6fb7b3d8655aa4edd1957f3ba 432 Gene3D G3DSA:1.20.1250.20 14 207 9.0E-45 T 23-04-2016 RR42_RS00375 074d49e6fb7b3d8655aa4edd1957f3ba 432 PANTHER PTHR11662:SF257 15 428 1.8E-115 T 23-04-2016 RR42_RS00375 074d49e6fb7b3d8655aa4edd1957f3ba 432 SUPERFAMILY SSF103473 13 424 1.11E-76 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS09795 702b57f4229ce62095ef33a828c8994f 365 Gene3D G3DSA:2.40.50.100 223 254 5.9E-13 T 23-04-2016 RR42_RS09795 702b57f4229ce62095ef33a828c8994f 365 Gene3D G3DSA:2.40.50.100 62 94 5.9E-13 T 23-04-2016 RR42_RS09795 702b57f4229ce62095ef33a828c8994f 365 SUPERFAMILY SSF111369 62 148 1.7E-7 T 23-04-2016 RR42_RS09795 702b57f4229ce62095ef33a828c8994f 365 PANTHER PTHR32347 5 285 3.0E-18 T 23-04-2016 RR42_RS06665 15e7a004e9c53fd14e07ec6de5767a5a 391 PANTHER PTHR19446:SF383 54 307 1.0E-14 T 23-04-2016 RR42_RS06665 15e7a004e9c53fd14e07ec6de5767a5a 391 PANTHER PTHR19446 54 307 1.0E-14 T 23-04-2016 RR42_RS06665 15e7a004e9c53fd14e07ec6de5767a5a 391 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 223 313 1.2E-9 T 23-04-2016 IPR000477 Reverse transcriptase domain RR42_RS06665 15e7a004e9c53fd14e07ec6de5767a5a 391 SUPERFAMILY SSF56672 58 355 4.77E-25 T 23-04-2016 RR42_RS12405 da6a004d293a954f0db268112df52173 423 Gene3D G3DSA:3.40.50.2300 5 126 7.1E-15 T 23-04-2016 RR42_RS12405 da6a004d293a954f0db268112df52173 423 Gene3D G3DSA:3.20.20.450 165 410 2.4E-30 T 23-04-2016 IPR001633 EAL domain RR42_RS12405 da6a004d293a954f0db268112df52173 423 SUPERFAMILY SSF52172 2 143 2.99E-13 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS12405 da6a004d293a954f0db268112df52173 423 SMART SM00052 162 417 1.3E-10 T 23-04-2016 IPR001633 EAL domain RR42_RS12405 da6a004d293a954f0db268112df52173 423 Pfam PF00072 Response regulator receiver domain 6 122 1.7E-8 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS12405 da6a004d293a954f0db268112df52173 423 SMART SM00448 4 126 0.0052 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS12405 da6a004d293a954f0db268112df52173 423 SUPERFAMILY SSF141868 168 410 4.71E-27 T 23-04-2016 IPR001633 EAL domain RR42_RS12405 da6a004d293a954f0db268112df52173 423 Pfam PF00563 EAL domain 168 409 2.3E-29 T 23-04-2016 IPR001633 EAL domain RR42_RS09985 e0bbbc816057ed826fe89644ea420c75 137 Pfam PF05154 TM2 domain 12 58 4.4E-15 T 23-04-2016 IPR007829 TM2 domain RR42_RS09985 e0bbbc816057ed826fe89644ea420c75 137 Pfam PF05154 TM2 domain 76 123 4.1E-13 T 23-04-2016 IPR007829 TM2 domain RR42_RS09985 e0bbbc816057ed826fe89644ea420c75 137 PANTHER PTHR21016 10 75 2.4E-24 T 23-04-2016 RR42_RS13540 fed38da1293fed6de57edf50daa28fe6 387 Gene3D G3DSA:2.40.110.10 126 220 2.9E-36 T 23-04-2016 RR42_RS13540 fed38da1293fed6de57edf50daa28fe6 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 220 6.2E-23 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RR42_RS13540 fed38da1293fed6de57edf50daa28fe6 387 SUPERFAMILY SSF56645 12 243 4.97E-66 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RR42_RS13540 fed38da1293fed6de57edf50daa28fe6 387 SUPERFAMILY SSF47203 230 385 9.99E-44 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS13540 fed38da1293fed6de57edf50daa28fe6 387 Gene3D G3DSA:1.20.140.10 221 386 4.8E-52 T 23-04-2016 RR42_RS13540 fed38da1293fed6de57edf50daa28fe6 387 Gene3D G3DSA:1.10.540.10 12 124 3.3E-19 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS13540 fed38da1293fed6de57edf50daa28fe6 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 380 1.6E-40 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RR42_RS13540 fed38da1293fed6de57edf50daa28fe6 387 PANTHER PTHR10909:SF305 11 386 4.6E-138 T 23-04-2016 RR42_RS13540 fed38da1293fed6de57edf50daa28fe6 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 123 5.2E-15 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RR42_RS13540 fed38da1293fed6de57edf50daa28fe6 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 129 141 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RR42_RS13540 fed38da1293fed6de57edf50daa28fe6 387 PANTHER PTHR10909 11 386 4.6E-138 T 23-04-2016 RR42_RS03485 084af41acc8b2028b4fbe72665ca976d 345 Pfam PF06812 ImpA, N-terminal, type VI secretion system 21 144 8.3E-31 T 23-04-2016 IPR010657 ImpA, N-terminal RR42_RS03485 084af41acc8b2028b4fbe72665ca976d 345 PANTHER PTHR37951:SF2 20 340 1.3E-97 T 23-04-2016 RR42_RS03485 084af41acc8b2028b4fbe72665ca976d 345 PANTHER PTHR37951 20 340 1.3E-97 T 23-04-2016 RR42_RS06670 60a3c1dc0317c61d1d7b5f84f46437d4 117 Pfam PF05635 23S rRNA-intervening sequence protein 6 107 5.4E-8 T 23-04-2016 IPR012657 23S rRNA-intervening sequence protein RR42_RS06670 60a3c1dc0317c61d1d7b5f84f46437d4 117 SUPERFAMILY SSF158446 6 111 3.79E-5 T 23-04-2016 RR42_RS05745 8814c61af89bf8de7e709b61f42d3b89 358 Pfam PF01636 Phosphotransferase enzyme family 42 270 6.4E-55 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase RR42_RS05745 8814c61af89bf8de7e709b61f42d3b89 358 SUPERFAMILY SSF56112 20 353 1.06E-58 T 23-04-2016 IPR011009 Protein kinase-like domain RR42_RS05745 8814c61af89bf8de7e709b61f42d3b89 358 Gene3D G3DSA:3.90.1200.10 124 324 4.2E-30 T 23-04-2016 RR42_RS05745 8814c61af89bf8de7e709b61f42d3b89 358 PANTHER PTHR12725:SF80 75 209 4.7E-17 T 23-04-2016 RR42_RS05745 8814c61af89bf8de7e709b61f42d3b89 358 PANTHER PTHR12725 75 209 4.7E-17 T 23-04-2016 RR42_RS19435 16730d1473de87f7fd7ae3f9ccaa9a72 234 Gene3D G3DSA:2.40.440.10 69 173 2.0E-4 T 23-04-2016 RR42_RS19435 16730d1473de87f7fd7ae3f9ccaa9a72 234 SUPERFAMILY SSF141523 70 174 7.06E-5 T 23-04-2016 RR42_RS07490 18f8c38c15c490361d3d0fe1ac376778 216 Pfam PF08808 RES domain 28 174 2.0E-28 T 23-04-2016 IPR014914 RES domain RR42_RS07490 18f8c38c15c490361d3d0fe1ac376778 216 SMART SM00953 38 172 5.6E-38 T 23-04-2016 IPR014914 RES domain RR42_RS06865 91916f03279c03e040db0694d2bd0ee9 168 Pfam PF07799 Protein of unknown function (DUF1643) 14 149 1.0E-34 T 23-04-2016 IPR012441 Protein of unknown function DUF1643 RR42_RS10800 935eb0455093492535c9fb650b72a29b 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 190 199 2.3E-9 T 23-04-2016 RR42_RS10800 935eb0455093492535c9fb650b72a29b 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 232 257 2.3E-9 T 23-04-2016 RR42_RS10800 935eb0455093492535c9fb650b72a29b 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 51 73 2.3E-9 T 23-04-2016 RR42_RS10800 935eb0455093492535c9fb650b72a29b 497 PANTHER PTHR23023:SF119 47 113 2.1E-91 T 23-04-2016 RR42_RS10800 935eb0455093492535c9fb650b72a29b 497 PANTHER PTHR23023:SF119 130 380 2.1E-91 T 23-04-2016 RR42_RS10800 935eb0455093492535c9fb650b72a29b 497 Gene3D G3DSA:3.50.50.60 194 358 4.7E-12 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS10800 935eb0455093492535c9fb650b72a29b 497 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 250 9.8E-6 T 23-04-2016 RR42_RS10800 935eb0455093492535c9fb650b72a29b 497 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 52 71 9.8E-6 T 23-04-2016 RR42_RS10800 935eb0455093492535c9fb650b72a29b 497 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 187 205 9.8E-6 T 23-04-2016 RR42_RS10800 935eb0455093492535c9fb650b72a29b 497 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 50 267 1.8E-13 T 23-04-2016 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase RR42_RS10800 935eb0455093492535c9fb650b72a29b 497 SUPERFAMILY SSF51905 51 384 9.27E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS10800 935eb0455093492535c9fb650b72a29b 497 Gene3D G3DSA:3.50.50.60 51 97 5.9E-16 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS10800 935eb0455093492535c9fb650b72a29b 497 Gene3D G3DSA:3.50.50.60 129 193 5.9E-16 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS10800 935eb0455093492535c9fb650b72a29b 497 PANTHER PTHR23023 47 113 2.1E-91 T 23-04-2016 RR42_RS10800 935eb0455093492535c9fb650b72a29b 497 PANTHER PTHR23023 130 380 2.1E-91 T 23-04-2016 RR42_RS05350 4d1a737562a090192dcec2143dbb38cf 275 Pfam PF12849 PBP superfamily domain 32 251 1.1E-27 T 23-04-2016 IPR024370 PBP domain RR42_RS05350 4d1a737562a090192dcec2143dbb38cf 275 Gene3D G3DSA:3.40.190.10 192 273 2.3E-24 T 23-04-2016 RR42_RS05350 4d1a737562a090192dcec2143dbb38cf 275 Gene3D G3DSA:3.40.190.10 28 157 4.8E-36 T 23-04-2016 RR42_RS05350 4d1a737562a090192dcec2143dbb38cf 275 PANTHER PTHR37945 31 275 1.5E-94 T 23-04-2016 RR42_RS05350 4d1a737562a090192dcec2143dbb38cf 275 SUPERFAMILY SSF53850 30 261 1.04E-29 T 23-04-2016 RR42_RS19765 a5adcd9eef31d5f2a14a1721634eaf86 119 Pfam PF03960 ArsC family 5 114 3.1E-15 T 23-04-2016 IPR006660 Arsenate reductase-like RR42_RS19765 a5adcd9eef31d5f2a14a1721634eaf86 119 PANTHER PTHR30041 2 114 4.8E-37 T 23-04-2016 RR42_RS19765 a5adcd9eef31d5f2a14a1721634eaf86 119 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 2 117 5.9E-41 T 23-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 RR42_RS19765 a5adcd9eef31d5f2a14a1721634eaf86 119 PANTHER PTHR30041:SF4 2 114 4.8E-37 T 23-04-2016 RR42_RS19765 a5adcd9eef31d5f2a14a1721634eaf86 119 Gene3D G3DSA:3.40.30.10 1 118 1.6E-44 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS19765 a5adcd9eef31d5f2a14a1721634eaf86 119 SUPERFAMILY SSF52833 1 118 2.24E-30 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS02890 2c1147443a4bc4bd8606b5fb64303805 139 Pfam PF02627 Carboxymuconolactone decarboxylase family 48 124 7.3E-22 T 23-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RR42_RS02890 2c1147443a4bc4bd8606b5fb64303805 139 SUPERFAMILY SSF69118 14 136 2.09E-31 T 23-04-2016 IPR029032 AhpD-like RR42_RS02890 2c1147443a4bc4bd8606b5fb64303805 139 PANTHER PTHR33570 17 139 1.1E-38 T 23-04-2016 RR42_RS02890 2c1147443a4bc4bd8606b5fb64303805 139 PANTHER PTHR33570:SF2 17 139 1.1E-38 T 23-04-2016 RR42_RS02890 2c1147443a4bc4bd8606b5fb64303805 139 Gene3D G3DSA:1.20.1290.10 18 134 2.2E-25 T 23-04-2016 IPR029032 AhpD-like RR42_RS23820 a87602735eabe4f356ae22d9f724a604 125 SUPERFAMILY SSF111369 14 66 2.09E-9 T 23-04-2016 RR42_RS23820 a87602735eabe4f356ae22d9f724a604 125 Pfam PF13437 HlyD family secretion protein 41 122 9.0E-11 T 23-04-2016 RR42_RS23820 a87602735eabe4f356ae22d9f724a604 125 PANTHER PTHR30367 1 125 2.3E-34 T 23-04-2016 RR42_RS23820 a87602735eabe4f356ae22d9f724a604 125 Gene3D G3DSA:2.40.50.100 3 71 8.8E-5 T 23-04-2016 RR42_RS23820 a87602735eabe4f356ae22d9f724a604 125 PANTHER PTHR30367:SF5 1 125 2.3E-34 T 23-04-2016 RR42_RS18965 e5143c653e7054c10c0478dbba55e836 258 Pfam PF02405 Permease MlaE 45 255 7.6E-76 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 RR42_RS18965 e5143c653e7054c10c0478dbba55e836 258 PANTHER PTHR30188:SF4 1 257 5.4E-104 T 23-04-2016 RR42_RS18965 e5143c653e7054c10c0478dbba55e836 258 PANTHER PTHR30188 1 257 5.4E-104 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 RR42_RS18965 e5143c653e7054c10c0478dbba55e836 258 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 257 8.1E-85 T 23-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria RR42_RS27165 2c336a9552cba49179b88ff6329ffa4c 182 PANTHER PTHR10947 2 182 3.2E-41 T 23-04-2016 RR42_RS27165 2c336a9552cba49179b88ff6329ffa4c 182 PANTHER PTHR10947:SF0 2 182 3.2E-41 T 23-04-2016 RR42_RS27165 2c336a9552cba49179b88ff6329ffa4c 182 Pfam PF03483 B3/4 domain 2 54 7.5E-12 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 RR42_RS27165 2c336a9552cba49179b88ff6329ffa4c 182 Pfam PF03484 tRNA synthetase B5 domain 73 142 1.1E-19 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 RR42_RS27165 2c336a9552cba49179b88ff6329ffa4c 182 Gene3D G3DSA:3.50.40.10 1 60 3.2E-18 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RR42_RS27165 2c336a9552cba49179b88ff6329ffa4c 182 SUPERFAMILY SSF46955 70 146 2.2E-18 T 23-04-2016 IPR009061 Putative DNA-binding domain RR42_RS27165 2c336a9552cba49179b88ff6329ffa4c 182 SUPERFAMILY SSF56037 1 60 1.15E-15 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RR42_RS27165 2c336a9552cba49179b88ff6329ffa4c 182 SMART SM00874 70 142 3.1E-27 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 RR42_RS27165 2c336a9552cba49179b88ff6329ffa4c 182 Gene3D G3DSA:3.30.56.20 69 146 1.0E-24 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 RR42_RS15320 ba1e1a4d981848314eda9ead2473b7bf 212 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 212 5.0E-89 T 23-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RR42_RS15320 ba1e1a4d981848314eda9ead2473b7bf 212 PANTHER PTHR10851:SF0 1 212 4.4E-108 T 23-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RR42_RS15320 ba1e1a4d981848314eda9ead2473b7bf 212 PIRSF PIRSF000190 1 212 4.1E-83 T 23-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RR42_RS15320 ba1e1a4d981848314eda9ead2473b7bf 212 SUPERFAMILY SSF50475 7 212 1.33E-71 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RR42_RS15320 ba1e1a4d981848314eda9ead2473b7bf 212 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 212 1.1E-19 T 23-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RR42_RS15320 ba1e1a4d981848314eda9ead2473b7bf 212 Gene3D G3DSA:2.30.110.10 11 212 2.5E-87 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RR42_RS15320 ba1e1a4d981848314eda9ead2473b7bf 212 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 119 1.5E-29 T 23-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RR42_RS15320 ba1e1a4d981848314eda9ead2473b7bf 212 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 10 212 41.069 T 23-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RR42_RS15320 ba1e1a4d981848314eda9ead2473b7bf 212 PANTHER PTHR10851 1 212 4.4E-108 T 23-04-2016 RR42_RS03045 b6e6feddd43976a683a18db48bcda614 282 SUPERFAMILY SSF53850 43 282 4.3E-89 T 23-04-2016 RR42_RS03045 b6e6feddd43976a683a18db48bcda614 282 Gene3D G3DSA:3.40.190.10 41 172 3.1E-58 T 23-04-2016 RR42_RS03045 b6e6feddd43976a683a18db48bcda614 282 PIRSF PIRSF002854 13 282 2.1E-106 T 23-04-2016 IPR004872 Lipoprotein NlpA family RR42_RS03045 b6e6feddd43976a683a18db48bcda614 282 Pfam PF03180 NLPA lipoprotein 44 281 1.2E-93 T 23-04-2016 IPR004872 Lipoprotein NlpA family RR42_RS03045 b6e6feddd43976a683a18db48bcda614 282 PANTHER PTHR30429 18 282 9.6E-125 T 23-04-2016 IPR004872 Lipoprotein NlpA family RR42_RS03045 b6e6feddd43976a683a18db48bcda614 282 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 30 280 6.0E-79 T 23-04-2016 IPR004872 Lipoprotein NlpA family RR42_RS04225 9c592a8cd2cfbf6573f880363a97680d 206 PANTHER PTHR34478:SF2 10 206 1.0E-87 T 23-04-2016 RR42_RS04225 9c592a8cd2cfbf6573f880363a97680d 206 Gene3D G3DSA:1.20.1440.20 28 206 2.2E-63 T 23-04-2016 IPR023353 LemA-like domain RR42_RS04225 9c592a8cd2cfbf6573f880363a97680d 206 SUPERFAMILY SSF140478 36 193 4.84E-55 T 23-04-2016 IPR023353 LemA-like domain RR42_RS04225 9c592a8cd2cfbf6573f880363a97680d 206 Pfam PF04011 LemA family 21 206 2.2E-66 T 23-04-2016 IPR007156 LemA RR42_RS04225 9c592a8cd2cfbf6573f880363a97680d 206 PANTHER PTHR34478 10 206 1.0E-87 T 23-04-2016 RR42_RS04880 39dbd8bd966d71c125ff3f192f0fcabd 416 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 38 391 2.8E-108 T 23-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- RR42_RS04880 39dbd8bd966d71c125ff3f192f0fcabd 416 Gene3D G3DSA:3.80.30.20 38 274 3.8E-29 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RR42_RS04880 39dbd8bd966d71c125ff3f192f0fcabd 416 PANTHER PTHR13932 36 414 3.0E-176 T 23-04-2016 RR42_RS04880 39dbd8bd966d71c125ff3f192f0fcabd 416 Pfam PF06969 HemN C-terminal domain 343 403 5.3E-8 T 23-04-2016 IPR010723 HemN, C-terminal RR42_RS04880 39dbd8bd966d71c125ff3f192f0fcabd 416 PANTHER PTHR13932:SF7 36 414 3.0E-176 T 23-04-2016 RR42_RS04880 39dbd8bd966d71c125ff3f192f0fcabd 416 SUPERFAMILY SSF102114 34 414 6.8E-106 T 23-04-2016 RR42_RS04880 39dbd8bd966d71c125ff3f192f0fcabd 416 Pfam PF04055 Radical SAM superfamily 42 215 6.2E-17 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RR42_RS04880 39dbd8bd966d71c125ff3f192f0fcabd 416 SMART SM00729 37 261 2.0E-52 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RR42_RS13290 40d48ef179aec2301ecf536c2c1983cb 839 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 28 587 1.8E-179 T 23-04-2016 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS13290 40d48ef179aec2301ecf536c2c1983cb 839 Gene3D G3DSA:3.20.70.20 539 584 2.0E-128 T 23-04-2016 RR42_RS13290 40d48ef179aec2301ecf536c2c1983cb 839 Gene3D G3DSA:3.20.70.20 448 495 2.0E-128 T 23-04-2016 RR42_RS13290 40d48ef179aec2301ecf536c2c1983cb 839 Gene3D G3DSA:3.20.70.20 255 413 2.0E-128 T 23-04-2016 RR42_RS13290 40d48ef179aec2301ecf536c2c1983cb 839 Gene3D G3DSA:3.20.70.20 16 211 2.0E-128 T 23-04-2016 RR42_RS13290 40d48ef179aec2301ecf536c2c1983cb 839 PRINTS PR01183 Ribonucleotide reductase large chain signature 289 300 4.4E-27 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS13290 40d48ef179aec2301ecf536c2c1983cb 839 PRINTS PR01183 Ribonucleotide reductase large chain signature 365 387 4.4E-27 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS13290 40d48ef179aec2301ecf536c2c1983cb 839 PRINTS PR01183 Ribonucleotide reductase large chain signature 393 416 4.4E-27 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS13290 40d48ef179aec2301ecf536c2c1983cb 839 PRINTS PR01183 Ribonucleotide reductase large chain signature 327 350 4.4E-27 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS13290 40d48ef179aec2301ecf536c2c1983cb 839 PRINTS PR01183 Ribonucleotide reductase large chain signature 448 475 4.4E-27 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS13290 40d48ef179aec2301ecf536c2c1983cb 839 PRINTS PR01183 Ribonucleotide reductase large chain signature 170 189 4.4E-27 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS13290 40d48ef179aec2301ecf536c2c1983cb 839 Pfam PF02867 Ribonucleotide reductase, barrel domain 89 580 4.4E-135 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RR42_RS13290 40d48ef179aec2301ecf536c2c1983cb 839 SUPERFAMILY SSF51998 448 604 3.97E-173 T 23-04-2016 RR42_RS13290 40d48ef179aec2301ecf536c2c1983cb 839 SUPERFAMILY SSF51998 9 211 3.97E-173 T 23-04-2016 RR42_RS13290 40d48ef179aec2301ecf536c2c1983cb 839 SUPERFAMILY SSF51998 255 413 3.97E-173 T 23-04-2016 RR42_RS13290 40d48ef179aec2301ecf536c2c1983cb 839 PANTHER PTHR11573 20 839 1.7E-198 T 23-04-2016 RR42_RS13290 40d48ef179aec2301ecf536c2c1983cb 839 PANTHER PTHR11573:SF3 20 839 1.7E-198 T 23-04-2016 RR42_RS03075 69b62abfae2b8e3e7d88d2ffd3dd0a5a 228 SMART SM00862 145 218 2.5E-21 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS03075 69b62abfae2b8e3e7d88d2ffd3dd0a5a 228 SMART SM00448 1 112 4.0E-36 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS03075 69b62abfae2b8e3e7d88d2ffd3dd0a5a 228 PANTHER PTHR26402 1 219 1.9E-79 T 23-04-2016 RR42_RS03075 69b62abfae2b8e3e7d88d2ffd3dd0a5a 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 218 4.2E-20 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RR42_RS03075 69b62abfae2b8e3e7d88d2ffd3dd0a5a 228 PANTHER PTHR26402:SF279 1 219 1.9E-79 T 23-04-2016 RR42_RS03075 69b62abfae2b8e3e7d88d2ffd3dd0a5a 228 Gene3D G3DSA:3.40.50.2300 1 119 3.9E-37 T 23-04-2016 RR42_RS03075 69b62abfae2b8e3e7d88d2ffd3dd0a5a 228 Gene3D G3DSA:1.10.10.10 127 219 2.9E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS03075 69b62abfae2b8e3e7d88d2ffd3dd0a5a 228 SUPERFAMILY SSF52172 1 172 1.04E-36 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS03075 69b62abfae2b8e3e7d88d2ffd3dd0a5a 228 Pfam PF00072 Response regulator receiver domain 3 112 1.8E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS14550 f56eff82b42cd4985868779b2faf9ecb 165 SMART SM00987 7 160 6.2E-4 T 23-04-2016 RR42_RS14550 f56eff82b42cd4985868779b2faf9ecb 165 SUPERFAMILY SSF52141 5 163 1.57E-36 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RR42_RS14550 f56eff82b42cd4985868779b2faf9ecb 165 Pfam PF03167 Uracil DNA glycosylase superfamily 9 159 4.2E-11 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RR42_RS14550 f56eff82b42cd4985868779b2faf9ecb 165 Gene3D G3DSA:3.40.470.10 6 163 1.7E-33 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RR42_RS14550 f56eff82b42cd4985868779b2faf9ecb 165 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 6 156 1.9E-46 T 23-04-2016 IPR026353 Hypoxanthine-DNA glycosylase RR42_RS14550 f56eff82b42cd4985868779b2faf9ecb 165 SMART SM00986 7 160 6.2E-4 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RR42_RS35490 b6a285381b1ce33f577dc20500de04d6 220 SUPERFAMILY SSF53383 20 216 1.24E-45 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS35490 b6a285381b1ce33f577dc20500de04d6 220 PANTHER PTHR11986 15 216 5.6E-48 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RR42_RS35490 b6a285381b1ce33f577dc20500de04d6 220 Gene3D G3DSA:3.90.1150.10 17 95 2.9E-17 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS35490 b6a285381b1ce33f577dc20500de04d6 220 Gene3D G3DSA:3.40.640.10 96 216 5.8E-25 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS35490 b6a285381b1ce33f577dc20500de04d6 220 PANTHER PTHR11986:SF5 15 216 5.6E-48 T 23-04-2016 RR42_RS35490 b6a285381b1ce33f577dc20500de04d6 220 Pfam PF00202 Aminotransferase class-III 54 216 1.9E-25 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RR42_RS01195 d02a55cffd35d2e4148b8f6291577441 157 SUPERFAMILY SSF117782 72 142 3.01E-6 T 23-04-2016 IPR002765 Uncharacterised protein family UPF0145 RR42_RS01195 d02a55cffd35d2e4148b8f6291577441 157 Gene3D G3DSA:3.30.110.70 91 142 1.2E-4 T 23-04-2016 IPR002765 Uncharacterised protein family UPF0145 RR42_RS08845 a4d72e76c5932f969122a694593e2d04 761 SUPERFAMILY SSF81442 276 749 8.9E-81 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS08845 a4d72e76c5932f969122a694593e2d04 761 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 282 726 7.2E-73 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RR42_RS13390 600a47458a256fa07f19189392267b47 262 PANTHER PTHR24322:SF317 159 191 1.5E-54 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RR42_RS13390 600a47458a256fa07f19189392267b47 262 PANTHER PTHR24322:SF317 11 143 1.5E-54 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RR42_RS13390 600a47458a256fa07f19189392267b47 262 SUPERFAMILY SSF51735 6 253 3.97E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS13390 600a47458a256fa07f19189392267b47 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 252 1.9E-84 T 23-04-2016 RR42_RS13390 600a47458a256fa07f19189392267b47 262 Gene3D G3DSA:3.40.50.720 2 253 1.4E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS13390 600a47458a256fa07f19189392267b47 262 PIRSF PIRSF000094 1 259 2.5E-112 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RR42_RS13390 600a47458a256fa07f19189392267b47 262 PANTHER PTHR24322 159 191 1.5E-54 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13390 600a47458a256fa07f19189392267b47 262 PANTHER PTHR24322 11 143 1.5E-54 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13390 600a47458a256fa07f19189392267b47 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 4.6E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13390 600a47458a256fa07f19189392267b47 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.6E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13390 600a47458a256fa07f19189392267b47 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 4.6E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS13390 600a47458a256fa07f19189392267b47 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 4.6E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS17820 0265e498858e1c86820692a741a5c5a7 299 Pfam PF04381 Putative exonuclease, RdgC 1 296 5.3E-118 T 23-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 RR42_RS17820 0265e498858e1c86820692a741a5c5a7 299 PANTHER PTHR38103 2 299 4.9E-81 T 23-04-2016 RR42_RS17820 0265e498858e1c86820692a741a5c5a7 299 PANTHER PTHR38103:SF1 2 299 4.9E-81 T 23-04-2016 RR42_RS17820 0265e498858e1c86820692a741a5c5a7 299 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 298 38.395 T 23-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 RR42_RS02845 2ac28db53dbafd9a8a4965d480a1c078 251 Gene3D G3DSA:3.40.390.30 118 244 5.0E-44 T 23-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 RR42_RS02845 2ac28db53dbafd9a8a4965d480a1c078 251 SUPERFAMILY SSF55486 119 244 1.32E-40 T 23-04-2016 RR42_RS02845 2ac28db53dbafd9a8a4965d480a1c078 251 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 133 236 1.6E-33 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RR42_RS02845 2ac28db53dbafd9a8a4965d480a1c078 251 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 205 215 - T 23-04-2016 IPR020549 Endoribonuclease YbeY, conserved site RR42_RS02845 2ac28db53dbafd9a8a4965d480a1c078 251 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 97 239 21.254 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RR42_RS02845 2ac28db53dbafd9a8a4965d480a1c078 251 Pfam PF02130 Uncharacterized protein family UPF0054 118 234 9.8E-33 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RR42_RS02845 2ac28db53dbafd9a8a4965d480a1c078 251 PANTHER PTHR22881 112 243 1.4E-44 T 23-04-2016 RR42_RS28355 be96791337ef70e0ae925c1bb6e5bc23 334 SUPERFAMILY SSF53335 313 333 2.05E-6 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS28355 be96791337ef70e0ae925c1bb6e5bc23 334 SUPERFAMILY SSF53335 13 132 2.05E-6 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS09550 81703094e415c78cc4a35db81f7c57f3 151 PRINTS PR01438 Universal stress protein signature 106 118 1.6E-20 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS09550 81703094e415c78cc4a35db81f7c57f3 151 PRINTS PR01438 Universal stress protein signature 2 20 1.6E-20 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS09550 81703094e415c78cc4a35db81f7c57f3 151 PRINTS PR01438 Universal stress protein signature 124 146 1.6E-20 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS09550 81703094e415c78cc4a35db81f7c57f3 151 PIRSF PIRSF006276 1 148 4.4E-19 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS09550 81703094e415c78cc4a35db81f7c57f3 151 Gene3D G3DSA:3.40.50.620 1 147 1.9E-40 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS09550 81703094e415c78cc4a35db81f7c57f3 151 PANTHER PTHR31964 1 146 1.1E-31 T 23-04-2016 RR42_RS09550 81703094e415c78cc4a35db81f7c57f3 151 SUPERFAMILY SSF52402 1 146 4.27E-38 T 23-04-2016 RR42_RS09550 81703094e415c78cc4a35db81f7c57f3 151 Pfam PF00582 Universal stress protein family 1 146 3.1E-34 T 23-04-2016 IPR006016 UspA GO:0006950 RR42_RS15420 010ddeee53fa58d6ed21d878267bc1ea 168 Pfam PF11780 Protein of unknown function (DUF3318) 36 149 6.3E-24 T 23-04-2016 IPR021751 Protein of unknown function DUF3318 RR42_RS19690 091242a9622296b92085c602a962b10d 151 PIRSF PIRSF010312 1 151 3.2E-51 T 23-04-2016 IPR016568 Sulphur oxidation, SoxY RR42_RS19690 091242a9622296b92085c602a962b10d 151 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 4 151 1.0E-52 T 23-04-2016 IPR016568 Sulphur oxidation, SoxY RR42_RS19690 091242a9622296b92085c602a962b10d 151 Pfam PF13501 Sulfur oxidation protein SoxY 48 149 3.8E-33 T 23-04-2016 IPR032711 Ig-like SoxY domain RR42_RS17035 9eff19f4039f3be9997e4e351e0e85c6 581 SUPERFAMILY SSF53474 12 137 2.65E-13 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS17035 9eff19f4039f3be9997e4e351e0e85c6 581 SUPERFAMILY SSF53474 192 261 2.65E-13 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS17035 9eff19f4039f3be9997e4e351e0e85c6 581 Pfam PF12146 Serine aminopeptidase, S33 39 156 8.9E-7 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 RR42_RS17035 9eff19f4039f3be9997e4e351e0e85c6 581 Pfam PF12146 Serine aminopeptidase, S33 339 426 8.2E-7 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 RR42_RS17035 9eff19f4039f3be9997e4e351e0e85c6 581 Gene3D G3DSA:3.40.50.1820 293 454 1.6E-14 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS17035 9eff19f4039f3be9997e4e351e0e85c6 581 Gene3D G3DSA:3.40.50.1820 9 137 3.3E-15 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS17035 9eff19f4039f3be9997e4e351e0e85c6 581 Gene3D G3DSA:3.40.50.1820 191 235 3.3E-15 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS17035 9eff19f4039f3be9997e4e351e0e85c6 581 SUPERFAMILY SSF53474 480 548 1.43E-21 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS17035 9eff19f4039f3be9997e4e351e0e85c6 581 SUPERFAMILY SSF53474 291 433 1.43E-21 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS16900 3beac7aa3d0017667619d7997fd6a67a 466 SUPERFAMILY SSF51556 53 386 2.23E-70 T 23-04-2016 IPR032466 Metal-dependent hydrolase RR42_RS16900 3beac7aa3d0017667619d7997fd6a67a 466 PANTHER PTHR11271 17 465 8.7E-152 T 23-04-2016 RR42_RS16900 3beac7aa3d0017667619d7997fd6a67a 466 Pfam PF01979 Amidohydrolase family 51 414 2.9E-30 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RR42_RS16900 3beac7aa3d0017667619d7997fd6a67a 466 PANTHER PTHR11271:SF4 17 465 8.7E-152 T 23-04-2016 IPR010252 Formiminoglutamate deiminase RR42_RS16900 3beac7aa3d0017667619d7997fd6a67a 466 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 6 463 1.4E-175 T 23-04-2016 IPR010252 Formiminoglutamate deiminase RR42_RS16900 3beac7aa3d0017667619d7997fd6a67a 466 Gene3D G3DSA:3.20.20.140 57 406 2.4E-71 T 23-04-2016 RR42_RS09560 a2e7658e0929f0a851f3caca1804d79a 202 Pfam PF04366 Las17-binding protein actin regulator 115 198 6.6E-6 T 23-04-2016 IPR007461 Ysc84 actin-binding domain RR42_RS13720 d5b4d7f5b17c3c568ea69375964a094e 373 PANTHER PTHR22893 1 357 4.0E-145 T 23-04-2016 RR42_RS13720 d5b4d7f5b17c3c568ea69375964a094e 373 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 340 3.6E-63 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RR42_RS13720 d5b4d7f5b17c3c568ea69375964a094e 373 SUPERFAMILY SSF51395 1 359 7.94E-115 T 23-04-2016 RR42_RS13720 d5b4d7f5b17c3c568ea69375964a094e 373 PANTHER PTHR22893:SF7 1 357 4.0E-145 T 23-04-2016 RR42_RS13720 d5b4d7f5b17c3c568ea69375964a094e 373 Gene3D G3DSA:3.20.20.70 1 363 1.9E-124 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS06000 0b124bc4c1cdd8f1f1113c8e9f8e5047 99 SUPERFAMILY SSF54909 1 98 6.56E-26 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RR42_RS06000 0b124bc4c1cdd8f1f1113c8e9f8e5047 99 Gene3D G3DSA:3.30.70.900 1 93 9.5E-37 T 23-04-2016 RR42_RS11685 28b44fbe6c830cba6c983dad7c76e7a4 81 Gene3D G3DSA:3.40.1190.20 2 29 5.3E-4 T 23-04-2016 IPR029056 Ribokinase-like RR42_RS13405 e24a2ad5a6bd2d846251d5c62a9b773f 405 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 221 383 1.2E-43 T 23-04-2016 IPR000160 GGDEF domain RR42_RS13405 e24a2ad5a6bd2d846251d5c62a9b773f 405 SMART SM00267 214 385 2.3E-49 T 23-04-2016 IPR000160 GGDEF domain RR42_RS13405 e24a2ad5a6bd2d846251d5c62a9b773f 405 SUPERFAMILY SSF55073 230 383 1.73E-43 T 23-04-2016 IPR029787 Nucleotide cyclase RR42_RS13405 e24a2ad5a6bd2d846251d5c62a9b773f 405 PANTHER PTHR10799 202 401 1.8E-26 T 23-04-2016 RR42_RS13405 e24a2ad5a6bd2d846251d5c62a9b773f 405 Gene3D G3DSA:3.30.70.270 227 383 2.4E-47 T 23-04-2016 RR42_RS13405 e24a2ad5a6bd2d846251d5c62a9b773f 405 PANTHER PTHR10799:SF750 202 401 1.8E-26 T 23-04-2016 RR42_RS13405 e24a2ad5a6bd2d846251d5c62a9b773f 405 Pfam PF00990 Diguanylate cyclase, GGDEF domain 225 380 6.4E-40 T 23-04-2016 IPR000160 GGDEF domain RR42_RS36995 a02b5f46da70d64ce19caeba2f378a24 115 PANTHER PTHR30486 39 115 3.0E-14 T 23-04-2016 RR42_RS36995 a02b5f46da70d64ce19caeba2f378a24 115 PANTHER PTHR30486:SF3 39 115 3.0E-14 T 23-04-2016 RR42_RS36995 a02b5f46da70d64ce19caeba2f378a24 115 SUPERFAMILY SSF52540 37 113 2.3E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS16590 2d852dbbebe4f4d52bd8a4ac0715918d 226 PANTHER PTHR30055 44 214 2.1E-16 T 23-04-2016 RR42_RS16590 2d852dbbebe4f4d52bd8a4ac0715918d 226 Pfam PF00440 Bacterial regulatory proteins, tetR family 47 82 9.5E-10 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS16590 2d852dbbebe4f4d52bd8a4ac0715918d 226 SUPERFAMILY SSF48498 107 218 1.72E-13 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RR42_RS16590 2d852dbbebe4f4d52bd8a4ac0715918d 226 Gene3D G3DSA:1.10.357.10 46 217 1.2E-25 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS16590 2d852dbbebe4f4d52bd8a4ac0715918d 226 SUPERFAMILY SSF46689 36 96 7.98E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS13970 692997ac4eec02d2b61495aba6a73085 401 PANTHER PTHR16254 1 401 2.8E-218 T 23-04-2016 RR42_RS13970 692997ac4eec02d2b61495aba6a73085 401 Pfam PF00999 Sodium/hydrogen exchanger family 13 393 6.5E-78 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RR42_RS13970 692997ac4eec02d2b61495aba6a73085 401 PANTHER PTHR16254:SF17 1 401 2.8E-218 T 23-04-2016 RR42_RS14790 59d269420fce4ddc46b0cb6d9f5f8949 330 Pfam PF03186 CobD/Cbib protein 32 254 1.8E-24 T 23-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 RR42_RS14790 59d269420fce4ddc46b0cb6d9f5f8949 330 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 330 61.626 T 23-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 RR42_RS14790 59d269420fce4ddc46b0cb6d9f5f8949 330 PANTHER PTHR38684 2 265 4.4E-25 T 23-04-2016 RR42_RS14790 59d269420fce4ddc46b0cb6d9f5f8949 330 PANTHER PTHR38684 301 330 4.4E-25 T 23-04-2016 RR42_RS10965 e8785d80c26557c20e9572774fdf1caa 434 SUPERFAMILY SSF142764 12 430 2.75E-126 T 23-04-2016 RR42_RS10965 e8785d80c26557c20e9572774fdf1caa 434 PANTHER PTHR30304 134 434 1.5E-90 T 23-04-2016 RR42_RS10965 e8785d80c26557c20e9572774fdf1caa 434 PANTHER PTHR30304:SF3 134 434 1.5E-90 T 23-04-2016 RR42_RS10965 e8785d80c26557c20e9572774fdf1caa 434 Pfam PF07005 Putative sugar-binding N-terminal domain 12 240 4.6E-73 T 23-04-2016 IPR010737 Putative sugar-binding, N-terminal domain RR42_RS10965 e8785d80c26557c20e9572774fdf1caa 434 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 268 423 3.0E-40 T 23-04-2016 IPR031475 Putative nucleotide-binding C-terminal domain RR42_RS02535 d975cbb052a53512676732d527b0c83f 631 ProSitePatterns PS00211 ABC transporters family signature. 506 520 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS02535 d975cbb052a53512676732d527b0c83f 631 Pfam PF00005 ABC transporter 385 534 3.8E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS02535 d975cbb052a53512676732d527b0c83f 631 Pfam PF00664 ABC transporter transmembrane region 46 321 1.1E-41 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RR42_RS02535 d975cbb052a53512676732d527b0c83f 631 Gene3D G3DSA:1.20.1560.10 34 347 3.5E-68 T 23-04-2016 RR42_RS02535 d975cbb052a53512676732d527b0c83f 631 SUPERFAMILY SSF90123 33 347 2.09E-63 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RR42_RS02535 d975cbb052a53512676732d527b0c83f 631 SMART SM00382 394 580 4.2E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS02535 d975cbb052a53512676732d527b0c83f 631 Gene3D G3DSA:3.40.50.300 368 600 6.8E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02535 d975cbb052a53512676732d527b0c83f 631 SUPERFAMILY SSF52540 360 604 9.87E-94 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02535 d975cbb052a53512676732d527b0c83f 631 PANTHER PTHR24221 26 613 0.0 T 23-04-2016 RR42_RS02535 d975cbb052a53512676732d527b0c83f 631 PANTHER PTHR24221:SF18 26 613 0.0 T 23-04-2016 RR42_RS13420 cfe5561402c242a6948b3dcd59c9b06d 158 SUPERFAMILY SSF53254 2 141 1.44E-20 T 23-04-2016 IPR029033 Histidine phosphatase superfamily RR42_RS13420 cfe5561402c242a6948b3dcd59c9b06d 158 SMART SM00855 2 114 2.9E-7 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RR42_RS13420 cfe5561402c242a6948b3dcd59c9b06d 158 Gene3D G3DSA:3.40.50.1240 1 158 2.7E-30 T 23-04-2016 IPR029033 Histidine phosphatase superfamily RR42_RS13420 cfe5561402c242a6948b3dcd59c9b06d 158 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 80 5.6E-10 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RR42_RS17020 a87082a4bfbf500b6c5ecbc7bc05a1c1 383 PANTHER PTHR30573 34 379 1.8E-149 T 23-04-2016 RR42_RS17020 a87082a4bfbf500b6c5ecbc7bc05a1c1 383 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 45 356 3.7E-112 T 23-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 RR42_RS17020 a87082a4bfbf500b6c5ecbc7bc05a1c1 383 Pfam PF02445 Quinolinate synthetase A protein 49 355 9.5E-103 T 23-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 RR42_RS17020 a87082a4bfbf500b6c5ecbc7bc05a1c1 383 SUPERFAMILY SSF142754 46 356 4.05E-108 T 23-04-2016 RR42_RS17020 a87082a4bfbf500b6c5ecbc7bc05a1c1 383 Hamap MF_00567 Quinolinate synthase A [nadA]. 7 362 66.42 T 23-04-2016 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 RR42_RS20445 c435ec9d834289176326f3b788aa78f4 256 Pfam PF14334 Domain of unknown function (DUF4390) 34 190 1.7E-60 T 23-04-2016 IPR025500 Protein of unknown function DUF4390 RR42_RS11250 b9f4b1ac22cfc858886b959cc9004038 336 PANTHER PTHR10314 1 324 3.7E-163 T 23-04-2016 RR42_RS11250 b9f4b1ac22cfc858886b959cc9004038 336 Gene3D G3DSA:3.40.50.1100 43 146 5.2E-40 T 23-04-2016 RR42_RS11250 b9f4b1ac22cfc858886b959cc9004038 336 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 23-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 RR42_RS11250 b9f4b1ac22cfc858886b959cc9004038 336 Gene3D G3DSA:3.40.50.1100 3 42 2.0E-68 T 23-04-2016 RR42_RS11250 b9f4b1ac22cfc858886b959cc9004038 336 Gene3D G3DSA:3.40.50.1100 152 320 2.0E-68 T 23-04-2016 RR42_RS11250 b9f4b1ac22cfc858886b959cc9004038 336 PANTHER PTHR10314:SF83 1 324 3.7E-163 T 23-04-2016 RR42_RS11250 b9f4b1ac22cfc858886b959cc9004038 336 SUPERFAMILY SSF53686 6 322 2.49E-100 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RR42_RS11250 b9f4b1ac22cfc858886b959cc9004038 336 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 303 4.3E-77 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RR42_RS20455 2cca665154bad83e6af2b31bcbace49f 286 Hamap MF_00188 Protease HtpX [htpX]. 4 278 29.052 T 23-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 RR42_RS20455 2cca665154bad83e6af2b31bcbace49f 286 Pfam PF01435 Peptidase family M48 68 278 2.7E-37 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RR42_RS20455 2cca665154bad83e6af2b31bcbace49f 286 Gene3D G3DSA:3.30.2010.10 56 147 2.2E-33 T 23-04-2016 RR42_RS20455 2cca665154bad83e6af2b31bcbace49f 286 PANTHER PTHR10120:SF19 1 280 4.5E-103 T 23-04-2016 RR42_RS20455 2cca665154bad83e6af2b31bcbace49f 286 PANTHER PTHR10120 1 280 4.5E-103 T 23-04-2016 RR42_RS16770 585bd006ca34e9c6aff816a2088d164c 486 SUPERFAMILY SSF103473 24 452 4.84E-52 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS16770 585bd006ca34e9c6aff816a2088d164c 486 Gene3D G3DSA:1.20.1250.20 31 213 1.1E-22 T 23-04-2016 RR42_RS16770 585bd006ca34e9c6aff816a2088d164c 486 Gene3D G3DSA:1.20.1250.20 267 455 7.5E-16 T 23-04-2016 RR42_RS16770 585bd006ca34e9c6aff816a2088d164c 486 PANTHER PTHR24064 63 444 8.1E-29 T 23-04-2016 RR42_RS16770 585bd006ca34e9c6aff816a2088d164c 486 Pfam PF00083 Sugar (and other) transporter 62 444 3.5E-28 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RR42_RS15585 94cda8af1cb15a5d2ee97d320e5f6915 355 Pfam PF01464 Transglycosylase SLT domain 201 278 1.9E-14 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 RR42_RS15585 94cda8af1cb15a5d2ee97d320e5f6915 355 PANTHER PTHR21666 170 287 1.7E-18 T 23-04-2016 RR42_RS15585 94cda8af1cb15a5d2ee97d320e5f6915 355 SUPERFAMILY SSF53955 196 313 1.72E-21 T 23-04-2016 IPR023346 Lysozyme-like domain RR42_RS15585 94cda8af1cb15a5d2ee97d320e5f6915 355 Gene3D G3DSA:1.10.530.10 199 308 5.0E-21 T 23-04-2016 RR42_RS12580 879b9c40cfd44b50dabfa7fef7737606 208 Pfam PF01865 Protein of unknown function DUF47 8 206 8.4E-33 T 23-04-2016 IPR018445 Putative phosphate transport regulator RR42_RS12580 879b9c40cfd44b50dabfa7fef7737606 208 SUPERFAMILY SSF109755 41 200 4.32E-7 T 23-04-2016 RR42_RS12580 879b9c40cfd44b50dabfa7fef7737606 208 PANTHER PTHR37298 1 208 9.7E-57 T 23-04-2016 RR42_RS12580 879b9c40cfd44b50dabfa7fef7737606 208 Gene3D G3DSA:1.20.58.220 108 199 2.2E-4 T 23-04-2016 RR42_RS05855 723764ea7cf20fbea553dcfaa3a18a35 132 SUPERFAMILY SSF46626 6 125 7.93E-18 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS05855 723764ea7cf20fbea553dcfaa3a18a35 132 Pfam PF00034 Cytochrome c 29 124 3.7E-11 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS05855 723764ea7cf20fbea553dcfaa3a18a35 132 Gene3D G3DSA:1.10.760.10 17 125 5.8E-22 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS02410 d30a312b2abb7d793aaf16c637a52253 224 Pfam PF02036 SCP-2 sterol transfer family 16 112 1.7E-14 T 23-04-2016 IPR003033 SCP2 sterol-binding domain RR42_RS02410 d30a312b2abb7d793aaf16c637a52253 224 PANTHER PTHR38693 1 214 4.2E-13 T 23-04-2016 RR42_RS07395 e54e632e8d519ddd77b2c744b9aba4cf 301 Pfam PF00892 EamA-like transporter family 167 299 1.3E-12 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS07395 e54e632e8d519ddd77b2c744b9aba4cf 301 Pfam PF00892 EamA-like transporter family 22 153 1.2E-11 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RR42_RS07395 e54e632e8d519ddd77b2c744b9aba4cf 301 PANTHER PTHR32322:SF11 6 301 7.9E-99 T 23-04-2016 RR42_RS07395 e54e632e8d519ddd77b2c744b9aba4cf 301 SUPERFAMILY SSF103481 49 155 1.57E-9 T 23-04-2016 RR42_RS07395 e54e632e8d519ddd77b2c744b9aba4cf 301 PANTHER PTHR32322 6 301 7.9E-99 T 23-04-2016 RR42_RS07395 e54e632e8d519ddd77b2c744b9aba4cf 301 SUPERFAMILY SSF103481 200 300 3.14E-13 T 23-04-2016 RR42_RS10130 f2bd29248a1e32ed729a65e3f18d12e1 264 SUPERFAMILY SSF53850 25 251 6.43E-29 T 23-04-2016 RR42_RS10130 f2bd29248a1e32ed729a65e3f18d12e1 264 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 250 1.3E-11 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RR42_RS10130 f2bd29248a1e32ed729a65e3f18d12e1 264 Gene3D G3DSA:3.40.190.10 209 252 1.4E-8 T 23-04-2016 RR42_RS10130 f2bd29248a1e32ed729a65e3f18d12e1 264 Gene3D G3DSA:3.40.190.10 47 114 1.4E-8 T 23-04-2016 RR42_RS14410 c074609cfe12cd37b6b7b36b2a207c6e 259 Pfam PF00005 ABC transporter 26 185 2.4E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS14410 c074609cfe12cd37b6b7b36b2a207c6e 259 PANTHER PTHR24220 132 259 1.1E-121 T 23-04-2016 RR42_RS14410 c074609cfe12cd37b6b7b36b2a207c6e 259 PANTHER PTHR24220 11 116 1.1E-121 T 23-04-2016 RR42_RS14410 c074609cfe12cd37b6b7b36b2a207c6e 259 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 237 257 1.2E-9 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RR42_RS14410 c074609cfe12cd37b6b7b36b2a207c6e 259 SMART SM00382 34 235 4.7E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS14410 c074609cfe12cd37b6b7b36b2a207c6e 259 SUPERFAMILY SSF52540 9 257 2.34E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14410 c074609cfe12cd37b6b7b36b2a207c6e 259 Gene3D G3DSA:3.40.50.300 6 255 1.8E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14410 c074609cfe12cd37b6b7b36b2a207c6e 259 PANTHER PTHR24220:SF358 132 259 1.1E-121 T 23-04-2016 RR42_RS14410 c074609cfe12cd37b6b7b36b2a207c6e 259 PANTHER PTHR24220:SF358 11 116 1.1E-121 T 23-04-2016 RR42_RS16955 bce58515efc38c9235c0aa658b1918d8 395 Gene3D G3DSA:3.90.1150.10 299 393 8.4E-29 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS16955 bce58515efc38c9235c0aa658b1918d8 395 Gene3D G3DSA:3.90.1150.10 11 54 8.4E-29 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RR42_RS16955 bce58515efc38c9235c0aa658b1918d8 395 SUPERFAMILY SSF53383 6 393 4.03E-113 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RR42_RS16955 bce58515efc38c9235c0aa658b1918d8 395 PIRSF PIRSF000521 17 394 1.6E-43 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RR42_RS16955 bce58515efc38c9235c0aa658b1918d8 395 Pfam PF00202 Aminotransferase class-III 19 389 1.1E-103 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RR42_RS16955 bce58515efc38c9235c0aa658b1918d8 395 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 216 253 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RR42_RS16955 bce58515efc38c9235c0aa658b1918d8 395 PANTHER PTHR11986:SF88 10 395 4.0E-173 T 23-04-2016 RR42_RS16955 bce58515efc38c9235c0aa658b1918d8 395 Gene3D G3DSA:3.40.640.10 56 294 1.1E-81 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RR42_RS16955 bce58515efc38c9235c0aa658b1918d8 395 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 8 392 40.826 T 23-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 RR42_RS16955 bce58515efc38c9235c0aa658b1918d8 395 PANTHER PTHR11986 10 395 4.0E-173 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RR42_RS08250 da0a473a9ad8f6e97c857e7ce397b1b6 388 Pfam PF11651 P22 coat protein - gene protein 5 57 316 3.9E-14 T 23-04-2016 IPR024659 Major capsid protein Gp5 RR42_RS04605 6315ade2c2b4d8a31e9a06f8c78af9a1 161 Pfam PF05154 TM2 domain 17 65 3.3E-9 T 23-04-2016 IPR007829 TM2 domain RR42_RS15745 87935412e6957f9a27cc29cab9052e68 411 Pfam PF13579 Glycosyl transferase 4-like domain 22 186 1.1E-7 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RR42_RS15745 87935412e6957f9a27cc29cab9052e68 411 SUPERFAMILY SSF53756 20 399 7.85E-33 T 23-04-2016 RR42_RS15745 87935412e6957f9a27cc29cab9052e68 411 Pfam PF13692 Glycosyl transferases group 1 247 375 4.0E-11 T 23-04-2016 RR42_RS15745 87935412e6957f9a27cc29cab9052e68 411 PANTHER PTHR12526 67 392 5.3E-14 T 23-04-2016 RR42_RS15745 87935412e6957f9a27cc29cab9052e68 411 PANTHER PTHR12526 1 43 5.3E-14 T 23-04-2016 RR42_RS02325 53168fd1818ed52d3efc5123c2ae36b2 585 SUPERFAMILY SSF48208 194 581 1.29E-90 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 RR42_RS02325 53168fd1818ed52d3efc5123c2ae36b2 585 PANTHER PTHR31616:SF2 1 585 3.2E-137 T 23-04-2016 RR42_RS02325 53168fd1818ed52d3efc5123c2ae36b2 585 PANTHER PTHR31616 1 585 3.2E-137 T 23-04-2016 RR42_RS02325 53168fd1818ed52d3efc5123c2ae36b2 585 Pfam PF00723 Glycosyl hydrolases family 15 211 519 1.4E-26 T 23-04-2016 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: REACT_474 RR42_RS02325 53168fd1818ed52d3efc5123c2ae36b2 585 Gene3D G3DSA:1.50.10.10 208 581 9.4E-77 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 RR42_RS11030 8213670da82c0ffe99d4eeb332a2d822 306 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 1.4E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS11030 8213670da82c0ffe99d4eeb332a2d822 306 PRINTS PR00111 Alpha/beta hydrolase fold signature 57 72 1.4E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS11030 8213670da82c0ffe99d4eeb332a2d822 306 PRINTS PR00111 Alpha/beta hydrolase fold signature 117 130 1.4E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS11030 8213670da82c0ffe99d4eeb332a2d822 306 Gene3D G3DSA:3.40.50.1820 11 305 2.4E-76 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS11030 8213670da82c0ffe99d4eeb332a2d822 306 Pfam PF00561 alpha/beta hydrolase fold 32 293 6.4E-26 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS11030 8213670da82c0ffe99d4eeb332a2d822 306 PANTHER PTHR10992 191 303 1.8E-80 T 23-04-2016 RR42_RS11030 8213670da82c0ffe99d4eeb332a2d822 306 PANTHER PTHR10992 11 175 1.8E-80 T 23-04-2016 RR42_RS11030 8213670da82c0ffe99d4eeb332a2d822 306 SUPERFAMILY SSF53474 12 305 2.05E-63 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS11030 8213670da82c0ffe99d4eeb332a2d822 306 PRINTS PR00412 Epoxide hydrolase signature 103 116 2.8E-14 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS11030 8213670da82c0ffe99d4eeb332a2d822 306 PRINTS PR00412 Epoxide hydrolase signature 249 265 2.8E-14 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS11030 8213670da82c0ffe99d4eeb332a2d822 306 PRINTS PR00412 Epoxide hydrolase signature 282 304 2.8E-14 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS11030 8213670da82c0ffe99d4eeb332a2d822 306 PRINTS PR00412 Epoxide hydrolase signature 117 130 2.8E-14 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS11030 8213670da82c0ffe99d4eeb332a2d822 306 PRINTS PR00412 Epoxide hydrolase signature 38 56 2.8E-14 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RR42_RS11030 8213670da82c0ffe99d4eeb332a2d822 306 PANTHER PTHR10992:SF793 191 303 1.8E-80 T 23-04-2016 RR42_RS11030 8213670da82c0ffe99d4eeb332a2d822 306 PANTHER PTHR10992:SF793 11 175 1.8E-80 T 23-04-2016 RR42_RS20700 c18aed5156d499be777abe64a60246cb 531 PANTHER PTHR11552:SF92 7 531 1.1E-138 T 23-04-2016 RR42_RS20700 c18aed5156d499be777abe64a60246cb 531 PANTHER PTHR11552 7 531 1.1E-138 T 23-04-2016 RR42_RS20700 c18aed5156d499be777abe64a60246cb 531 Pfam PF00732 GMC oxidoreductase 32 296 6.1E-44 T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 RR42_RS20700 c18aed5156d499be777abe64a60246cb 531 Gene3D G3DSA:3.50.50.60 194 298 1.3E-71 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS20700 c18aed5156d499be777abe64a60246cb 531 Gene3D G3DSA:3.50.50.60 460 527 1.3E-71 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS20700 c18aed5156d499be777abe64a60246cb 531 Gene3D G3DSA:3.50.50.60 400 413 1.3E-71 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS20700 c18aed5156d499be777abe64a60246cb 531 Gene3D G3DSA:3.50.50.60 30 149 1.3E-71 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS20700 c18aed5156d499be777abe64a60246cb 531 Pfam PF05199 GMC oxidoreductase 384 519 1.8E-21 T 23-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 RR42_RS20700 c18aed5156d499be777abe64a60246cb 531 SUPERFAMILY SSF51905 26 296 6.64E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS20700 c18aed5156d499be777abe64a60246cb 531 SUPERFAMILY SSF51905 466 528 6.64E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS07810 dc59405a9264f56d1cef18bf16aed72b 219 Gene3D G3DSA:1.10.3720.10 12 215 1.9E-45 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS07810 dc59405a9264f56d1cef18bf16aed72b 219 SUPERFAMILY SSF161098 14 202 2.09E-41 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS07810 dc59405a9264f56d1cef18bf16aed72b 219 PANTHER PTHR30614 5 219 9.4E-80 T 23-04-2016 RR42_RS07810 dc59405a9264f56d1cef18bf16aed72b 219 PANTHER PTHR30614:SF14 5 219 9.4E-80 T 23-04-2016 RR42_RS07810 dc59405a9264f56d1cef18bf16aed72b 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 211 2.7E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS07810 dc59405a9264f56d1cef18bf16aed72b 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 110 8.7E-29 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RR42_RS08750 ea49844598956b30706eb7742adaf47e 207 Pfam PF01814 Hemerythrin HHE cation binding domain 9 145 3.5E-15 T 23-04-2016 IPR012312 Haemerythrin-like RR42_RS08750 ea49844598956b30706eb7742adaf47e 207 Gene3D G3DSA:1.20.120.520 4 166 3.3E-25 T 23-04-2016 RR42_RS12575 ae418dfe7d9c1df42cb292086161f905 336 PANTHER PTHR11101 1 336 9.0E-100 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 RR42_RS12575 ae418dfe7d9c1df42cb292086161f905 336 Pfam PF01384 Phosphate transporter family 170 325 1.1E-54 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 RR42_RS12575 ae418dfe7d9c1df42cb292086161f905 336 Pfam PF01384 Phosphate transporter family 25 165 1.1E-35 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 RR42_RS16195 df7c44491784f27a7cae91c2d3aa2559 227 SUPERFAMILY SSF56784 1 213 1.52E-45 T 23-04-2016 IPR023214 HAD-like domain RR42_RS16195 df7c44491784f27a7cae91c2d3aa2559 227 Gene3D G3DSA:3.40.50.1000 1 16 3.2E-41 T 23-04-2016 IPR023214 HAD-like domain RR42_RS16195 df7c44491784f27a7cae91c2d3aa2559 227 Gene3D G3DSA:3.40.50.1000 89 189 3.2E-41 T 23-04-2016 IPR023214 HAD-like domain RR42_RS16195 df7c44491784f27a7cae91c2d3aa2559 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 98 111 2.1E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS16195 df7c44491784f27a7cae91c2d3aa2559 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 2.1E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS16195 df7c44491784f27a7cae91c2d3aa2559 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 2.1E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS16195 df7c44491784f27a7cae91c2d3aa2559 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 2.1E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS16195 df7c44491784f27a7cae91c2d3aa2559 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 185 1.9E-25 T 23-04-2016 IPR023214 HAD-like domain RR42_RS16195 df7c44491784f27a7cae91c2d3aa2559 227 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 87 185 9.6E-15 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RR42_RS16195 df7c44491784f27a7cae91c2d3aa2559 227 PANTHER PTHR18901 4 187 4.1E-51 T 23-04-2016 RR42_RS18005 6f8c05aab727f3e8164ddeff7bfab29b 61 PANTHER PTHR36150:SF1 1 61 1.3E-19 T 23-04-2016 RR42_RS18005 6f8c05aab727f3e8164ddeff7bfab29b 61 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 1 58 19.202 T 23-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 RR42_RS18005 6f8c05aab727f3e8164ddeff7bfab29b 61 Pfam PF03884 Domain of unknown function (DUF329) 5 57 1.4E-24 T 23-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 RR42_RS18005 6f8c05aab727f3e8164ddeff7bfab29b 61 Gene3D G3DSA:3.30.50.10 2 59 4.9E-26 T 23-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 RR42_RS18005 6f8c05aab727f3e8164ddeff7bfab29b 61 SUPERFAMILY SSF57716 2 59 7.41E-21 T 23-04-2016 RR42_RS18005 6f8c05aab727f3e8164ddeff7bfab29b 61 PANTHER PTHR36150 1 61 1.3E-19 T 23-04-2016 RR42_RS20085 e790b72eeaddced14f72df212f2bf82b 107 TIGRFAM TIGR02118 TIGR02118: conserved hypothetical protein 1 104 1.3E-19 T 23-04-2016 IPR009799 EthD domain RR42_RS20085 e790b72eeaddced14f72df212f2bf82b 107 Gene3D G3DSA:3.30.70.900 2 102 7.1E-30 T 23-04-2016 RR42_RS20085 e790b72eeaddced14f72df212f2bf82b 107 Pfam PF07110 EthD domain 18 93 6.7E-6 T 23-04-2016 IPR009799 EthD domain RR42_RS20085 e790b72eeaddced14f72df212f2bf82b 107 SUPERFAMILY SSF54909 1 104 1.21E-15 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RR42_RS20085 e790b72eeaddced14f72df212f2bf82b 107 PANTHER PTHR40260 1 107 8.6E-15 T 23-04-2016 RR42_RS16295 2357a66b433b5ad849e41281470f00fa 93 Pfam PF05488 PAAR motif 8 84 3.0E-22 T 23-04-2016 IPR008727 PAAR motif RR42_RS02180 be09dab024713b13cc601d70e9aa6493 328 SUPERFAMILY SSF53850 121 286 2.67E-8 T 23-04-2016 RR42_RS02180 be09dab024713b13cc601d70e9aa6493 328 PANTHER PTHR30349:SF16 1 325 1.3E-49 T 23-04-2016 RR42_RS02180 be09dab024713b13cc601d70e9aa6493 328 Gene3D G3DSA:3.40.190.10 126 221 2.4E-5 T 23-04-2016 RR42_RS02180 be09dab024713b13cc601d70e9aa6493 328 PANTHER PTHR30349 1 325 1.3E-49 T 23-04-2016 RR42_RS02180 be09dab024713b13cc601d70e9aa6493 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 323 1.1E-51 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS02180 be09dab024713b13cc601d70e9aa6493 328 PIRSF PIRSF017082 1 328 5.3E-69 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS03370 a1ec8119ad0eb1ff7aaf0da9f1a86d3c 325 Gene3D G3DSA:3.40.50.2300 159 318 5.1E-41 T 23-04-2016 RR42_RS03370 a1ec8119ad0eb1ff7aaf0da9f1a86d3c 325 PANTHER PTHR32196 40 315 5.0E-102 T 23-04-2016 RR42_RS03370 a1ec8119ad0eb1ff7aaf0da9f1a86d3c 325 PANTHER PTHR32196:SF41 40 315 5.0E-102 T 23-04-2016 RR42_RS03370 a1ec8119ad0eb1ff7aaf0da9f1a86d3c 325 SUPERFAMILY SSF53822 22 318 2.75E-75 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RR42_RS03370 a1ec8119ad0eb1ff7aaf0da9f1a86d3c 325 Pfam PF13407 Periplasmic binding protein domain 43 296 1.8E-43 T 23-04-2016 IPR025997 Periplasmic binding protein RR42_RS03370 a1ec8119ad0eb1ff7aaf0da9f1a86d3c 325 Gene3D G3DSA:3.40.50.2300 41 158 7.0E-33 T 23-04-2016 RR42_RS03620 e0057e89239ad44e139793b7205e75f8 292 PANTHER PTHR30606:SF5 6 292 1.2E-77 T 23-04-2016 RR42_RS03620 e0057e89239ad44e139793b7205e75f8 292 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 2 282 3.4E-56 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RR42_RS03620 e0057e89239ad44e139793b7205e75f8 292 PIRSF PIRSF026649 1 292 7.4E-77 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RR42_RS03620 e0057e89239ad44e139793b7205e75f8 292 PANTHER PTHR30606 6 292 1.2E-77 T 23-04-2016 RR42_RS11280 428c32edce9cf72b8cce2bfe9daf5a7c 142 SUPERFAMILY SSF54637 7 132 1.0E-22 T 23-04-2016 IPR029069 HotDog domain RR42_RS11280 428c32edce9cf72b8cce2bfe9daf5a7c 142 Pfam PF03061 Thioesterase superfamily 44 113 3.5E-8 T 23-04-2016 IPR006683 Thioesterase domain RR42_RS11280 428c32edce9cf72b8cce2bfe9daf5a7c 142 Gene3D G3DSA:3.10.129.10 5 140 5.5E-28 T 23-04-2016 IPR029069 HotDog domain RR42_RS11280 428c32edce9cf72b8cce2bfe9daf5a7c 142 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 14 112 1.2E-13 T 23-04-2016 IPR003736 Phenylacetic acid degradation-related domain RR42_RS11280 428c32edce9cf72b8cce2bfe9daf5a7c 142 PANTHER PTHR12418 6 140 8.4E-16 T 23-04-2016 RR42_RS14925 52b06289738e79af91734c3836b473e7 220 Gene3D G3DSA:3.30.1150.10 115 209 8.0E-10 T 23-04-2016 RR42_RS14925 52b06289738e79af91734c3836b473e7 220 SUPERFAMILY SSF74653 121 211 1.96E-8 T 23-04-2016 RR42_RS14925 52b06289738e79af91734c3836b473e7 220 SUPERFAMILY SSF74653 45 58 1.96E-8 T 23-04-2016 RR42_RS14925 52b06289738e79af91734c3836b473e7 220 Pfam PF13103 TonB C terminal 132 205 7.6E-5 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 RR42_RS19615 e124b6095574665178fdaa402a533f3d 439 Pfam PF13163 Protein of unknown function (DUF3999) 20 427 2.1E-108 T 23-04-2016 IPR025060 Protein of unknown function DUF3999 RR42_RS32875 4b36a4d8c28cf5223d0851f263a996fa 100 Gene3D G3DSA:3.40.1110.10 1 94 1.5E-8 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RR42_RS32875 4b36a4d8c28cf5223d0851f263a996fa 100 SUPERFAMILY SSF81660 1 95 2.06E-11 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RR42_RS21250 484767f03fb1d1382cf643d6f3de3709 99 PANTHER PTHR32145:SF7 1 99 6.1E-22 T 23-04-2016 RR42_RS21250 484767f03fb1d1382cf643d6f3de3709 99 Gene3D G3DSA:3.60.15.10 2 98 7.8E-15 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS21250 484767f03fb1d1382cf643d6f3de3709 99 PANTHER PTHR32145 1 99 6.1E-22 T 23-04-2016 RR42_RS21250 484767f03fb1d1382cf643d6f3de3709 99 SUPERFAMILY SSF56281 12 76 6.5E-9 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS02375 d0a74e39d167b6dcef875f954d5b8463 192 PANTHER PTHR30353 96 174 6.2E-30 T 23-04-2016 IPR032818 DedA family RR42_RS02375 d0a74e39d167b6dcef875f954d5b8463 192 PANTHER PTHR30353 1 77 6.2E-30 T 23-04-2016 IPR032818 DedA family RR42_RS02375 d0a74e39d167b6dcef875f954d5b8463 192 PANTHER PTHR30353:SF12 96 174 6.2E-30 T 23-04-2016 RR42_RS02375 d0a74e39d167b6dcef875f954d5b8463 192 PANTHER PTHR30353:SF12 1 77 6.2E-30 T 23-04-2016 RR42_RS02375 d0a74e39d167b6dcef875f954d5b8463 192 Pfam PF09335 SNARE associated Golgi protein 52 169 3.2E-8 T 23-04-2016 IPR032816 SNARE associated Golgi protein RR42_RS00055 9ef23f021316a4b38933c9cfdf6ce339 398 Pfam PF10544 T5orf172 domain 266 376 9.0E-12 T 23-04-2016 IPR018306 Bacteriophage T5, Orf172 DNA-binding RR42_RS00055 9ef23f021316a4b38933c9cfdf6ce339 398 SMART SM00974 282 376 1.8E-20 T 23-04-2016 IPR018306 Bacteriophage T5, Orf172 DNA-binding RR42_RS03950 381c2abb9e9c2f53230b909a9d3b6e7d 140 SUPERFAMILY SSF54909 63 139 1.05E-15 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RR42_RS03950 381c2abb9e9c2f53230b909a9d3b6e7d 140 SUPERFAMILY SSF46785 1 57 1.09E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS03950 381c2abb9e9c2f53230b909a9d3b6e7d 140 PANTHER PTHR30154 1 140 4.8E-36 T 23-04-2016 RR42_RS03950 381c2abb9e9c2f53230b909a9d3b6e7d 140 SMART SM00344 1 107 2.4E-25 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RR42_RS03950 381c2abb9e9c2f53230b909a9d3b6e7d 140 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.0E-9 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS03950 381c2abb9e9c2f53230b909a9d3b6e7d 140 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.0E-9 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS03950 381c2abb9e9c2f53230b909a9d3b6e7d 140 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.0E-9 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS03950 381c2abb9e9c2f53230b909a9d3b6e7d 140 Gene3D G3DSA:3.30.70.920 65 139 8.3E-15 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RR42_RS03950 381c2abb9e9c2f53230b909a9d3b6e7d 140 Pfam PF01037 Lrp/AsnC ligand binding domain 69 136 2.2E-14 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RR42_RS03950 381c2abb9e9c2f53230b909a9d3b6e7d 140 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 6.8E-14 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RR42_RS03950 381c2abb9e9c2f53230b909a9d3b6e7d 140 Gene3D G3DSA:1.10.10.10 1 53 1.4E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS02045 aec7e69758c3f3035193e5f2302cce1a 647 SUPERFAMILY SSF52540 41 111 8.33E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02045 aec7e69758c3f3035193e5f2302cce1a 647 SUPERFAMILY SSF52540 180 342 8.33E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02045 aec7e69758c3f3035193e5f2302cce1a 647 Gene3D G3DSA:3.40.50.300 207 316 1.2E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02045 aec7e69758c3f3035193e5f2302cce1a 647 Gene3D G3DSA:3.40.50.300 56 106 1.2E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02045 aec7e69758c3f3035193e5f2302cce1a 647 Pfam PF00350 Dynamin family 57 271 6.4E-15 T 23-04-2016 IPR022812 Dynamin superfamily RR42_RS20230 316c46ba5c4f0455766b81876ecf1404 314 PANTHER PTHR30537:SF26 1 314 1.7E-79 T 23-04-2016 RR42_RS20230 316c46ba5c4f0455766b81876ecf1404 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 7.2E-21 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS20230 316c46ba5c4f0455766b81876ecf1404 314 SUPERFAMILY SSF53850 93 300 3.1E-33 T 23-04-2016 RR42_RS20230 316c46ba5c4f0455766b81876ecf1404 314 SUPERFAMILY SSF46785 9 114 2.13E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS20230 316c46ba5c4f0455766b81876ecf1404 314 Gene3D G3DSA:3.40.190.10 93 134 1.2E-4 T 23-04-2016 RR42_RS20230 316c46ba5c4f0455766b81876ecf1404 314 Gene3D G3DSA:3.40.190.10 165 266 3.5E-23 T 23-04-2016 RR42_RS20230 316c46ba5c4f0455766b81876ecf1404 314 Pfam PF03466 LysR substrate binding domain 91 295 8.4E-32 T 23-04-2016 IPR005119 LysR, substrate-binding RR42_RS20230 316c46ba5c4f0455766b81876ecf1404 314 PANTHER PTHR30537 1 314 1.7E-79 T 23-04-2016 RR42_RS20230 316c46ba5c4f0455766b81876ecf1404 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.0E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS20230 316c46ba5c4f0455766b81876ecf1404 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.0E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS20230 316c46ba5c4f0455766b81876ecf1404 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.0E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RR42_RS20230 316c46ba5c4f0455766b81876ecf1404 314 Gene3D G3DSA:1.10.10.10 1 84 1.7E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19870 d6e3a7269943f4e28e5aff3e91d41ca3 492 PRINTS PR01050 Pyruvate kinase family signature 310 326 1.1E-61 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS19870 d6e3a7269943f4e28e5aff3e91d41ca3 492 PRINTS PR01050 Pyruvate kinase family signature 214 240 1.1E-61 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS19870 d6e3a7269943f4e28e5aff3e91d41ca3 492 PRINTS PR01050 Pyruvate kinase family signature 291 309 1.1E-61 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS19870 d6e3a7269943f4e28e5aff3e91d41ca3 492 PRINTS PR01050 Pyruvate kinase family signature 62 78 1.1E-61 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS19870 d6e3a7269943f4e28e5aff3e91d41ca3 492 PRINTS PR01050 Pyruvate kinase family signature 241 265 1.1E-61 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS19870 d6e3a7269943f4e28e5aff3e91d41ca3 492 PRINTS PR01050 Pyruvate kinase family signature 187 201 1.1E-61 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS19870 d6e3a7269943f4e28e5aff3e91d41ca3 492 PRINTS PR01050 Pyruvate kinase family signature 266 290 1.1E-61 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS19870 d6e3a7269943f4e28e5aff3e91d41ca3 492 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 5 470 1.2E-150 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS19870 d6e3a7269943f4e28e5aff3e91d41ca3 492 SUPERFAMILY SSF50800 73 167 1.6E-24 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain RR42_RS19870 d6e3a7269943f4e28e5aff3e91d41ca3 492 SUPERFAMILY SSF52935 321 470 6.54E-36 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS19870 d6e3a7269943f4e28e5aff3e91d41ca3 492 Gene3D G3DSA:2.40.33.10 76 169 4.0E-28 T 23-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS19870 d6e3a7269943f4e28e5aff3e91d41ca3 492 SUPERFAMILY SSF51621 2 78 4.54E-96 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS19870 d6e3a7269943f4e28e5aff3e91d41ca3 492 SUPERFAMILY SSF51621 168 340 4.54E-96 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS19870 d6e3a7269943f4e28e5aff3e91d41ca3 492 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 467 8.8E-28 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS19870 d6e3a7269943f4e28e5aff3e91d41ca3 492 Gene3D G3DSA:3.20.20.60 170 323 5.7E-96 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS19870 d6e3a7269943f4e28e5aff3e91d41ca3 492 Gene3D G3DSA:3.20.20.60 5 75 5.7E-96 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RR42_RS19870 d6e3a7269943f4e28e5aff3e91d41ca3 492 PANTHER PTHR11817 2 470 1.4E-200 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS19870 d6e3a7269943f4e28e5aff3e91d41ca3 492 Pfam PF00224 Pyruvate kinase, barrel domain 5 334 3.9E-114 T 23-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS19870 d6e3a7269943f4e28e5aff3e91d41ca3 492 Gene3D G3DSA:3.40.1380.20 324 467 2.8E-38 T 23-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RR42_RS14900 0a29ffebf67191083db147525282338b 156 SUPERFAMILY SSF74653 82 141 6.47E-6 T 23-04-2016 RR42_RS14900 0a29ffebf67191083db147525282338b 156 Gene3D G3DSA:3.30.1150.10 48 138 2.7E-4 T 23-04-2016 RR42_RS09355 77de7b0b8785fc726df0d5254ff144da 392 Gene3D G3DSA:2.40.160.10 19 392 5.2E-87 T 23-04-2016 IPR023614 Porin domain RR42_RS09355 77de7b0b8785fc726df0d5254ff144da 392 Pfam PF13609 Gram-negative porin 6 351 1.0E-45 T 23-04-2016 RR42_RS09355 77de7b0b8785fc726df0d5254ff144da 392 SUPERFAMILY SSF56935 19 392 3.36E-78 T 23-04-2016 RR42_RS09355 77de7b0b8785fc726df0d5254ff144da 392 PRINTS PR00184 Neisseria sp. porin signature 324 348 4.8E-5 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RR42_RS09355 77de7b0b8785fc726df0d5254ff144da 392 PRINTS PR00184 Neisseria sp. porin signature 64 89 4.8E-5 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RR42_RS18195 3bd22baeccd8054adb165c5d5fe6edbd 332 PANTHER PTHR24220:SF586 7 331 2.6E-128 T 23-04-2016 RR42_RS18195 3bd22baeccd8054adb165c5d5fe6edbd 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 240 304 9.7E-20 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RR42_RS18195 3bd22baeccd8054adb165c5d5fe6edbd 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 322 1.8E-26 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RR42_RS18195 3bd22baeccd8054adb165c5d5fe6edbd 332 PANTHER PTHR24220 7 331 2.6E-128 T 23-04-2016 RR42_RS18195 3bd22baeccd8054adb165c5d5fe6edbd 332 SUPERFAMILY SSF52540 34 308 2.07E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18195 3bd22baeccd8054adb165c5d5fe6edbd 332 Pfam PF00005 ABC transporter 26 188 8.3E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS18195 3bd22baeccd8054adb165c5d5fe6edbd 332 Gene3D G3DSA:3.40.50.300 4 262 2.5E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18195 3bd22baeccd8054adb165c5d5fe6edbd 332 SMART SM00382 34 238 2.5E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS18195 3bd22baeccd8054adb165c5d5fe6edbd 332 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS05560 bc324546fe050fe02be99cb2b6459fdd 116 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 22 111 7.3E-23 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 RR42_RS05560 bc324546fe050fe02be99cb2b6459fdd 116 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 17 116 20.399 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 RR42_RS05560 bc324546fe050fe02be99cb2b6459fdd 116 PANTHER PTHR11434 18 116 3.7E-39 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 RR42_RS20425 c637d9535372dac6ee97a578bf22404d 223 PRINTS PR00783 Major intrinsic protein family signature 41 65 4.4E-10 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RR42_RS20425 c637d9535372dac6ee97a578bf22404d 223 PRINTS PR00783 Major intrinsic protein family signature 121 139 4.4E-10 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RR42_RS20425 c637d9535372dac6ee97a578bf22404d 223 PRINTS PR00783 Major intrinsic protein family signature 78 97 4.4E-10 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RR42_RS20425 c637d9535372dac6ee97a578bf22404d 223 Gene3D G3DSA:1.20.1080.10 2 210 7.5E-28 T 23-04-2016 IPR023271 Aquaporin-like RR42_RS20425 c637d9535372dac6ee97a578bf22404d 223 SUPERFAMILY SSF81338 2 209 3.4E-35 T 23-04-2016 IPR023271 Aquaporin-like RR42_RS20425 c637d9535372dac6ee97a578bf22404d 223 Pfam PF00230 Major intrinsic protein 2 135 4.8E-16 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RR42_RS12085 ed75ad56ab2e070084fa0cf3f4e96e92 147 Gene3D G3DSA:3.10.180.10 5 126 5.4E-19 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS12085 ed75ad56ab2e070084fa0cf3f4e96e92 147 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 121 1.1E-4 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RR42_RS12085 ed75ad56ab2e070084fa0cf3f4e96e92 147 SUPERFAMILY SSF54593 5 126 1.75E-21 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS23330 2635fd2172f4dcbdc88638087136d6a2 295 SUPERFAMILY SSF52096 19 247 5.18E-29 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS23330 2635fd2172f4dcbdc88638087136d6a2 295 PANTHER PTHR11941 6 166 6.6E-14 T 23-04-2016 RR42_RS23330 2635fd2172f4dcbdc88638087136d6a2 295 Pfam PF00378 Enoyl-CoA hydratase/isomerase 24 167 3.5E-11 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RR42_RS23330 2635fd2172f4dcbdc88638087136d6a2 295 Gene3D G3DSA:3.90.226.10 21 200 3.6E-24 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RR42_RS15265 00f4cf306e2e1641932399f0fd829ae5 259 SUPERFAMILY SSF52833 32 249 5.37E-51 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS15265 00f4cf306e2e1641932399f0fd829ae5 259 PANTHER PTHR36057:SF1 37 256 1.1E-25 T 23-04-2016 RR42_RS15265 00f4cf306e2e1641932399f0fd829ae5 259 PANTHER PTHR36057 37 256 1.1E-25 T 23-04-2016 RR42_RS15265 00f4cf306e2e1641932399f0fd829ae5 259 Pfam PF06764 Protein of unknown function (DUF1223) 38 240 5.0E-53 T 23-04-2016 IPR010634 Protein of unknown function DUF1223 RR42_RS20735 874ccd34d434fd7ab84e70e839bf8469 54 SUPERFAMILY SSF57802 1 52 1.25E-21 T 23-04-2016 RR42_RS20735 874ccd34d434fd7ab84e70e839bf8469 54 PRINTS PR00163 Rubredoxin signature 33 49 5.5E-8 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 RR42_RS20735 874ccd34d434fd7ab84e70e839bf8469 54 PRINTS PR00163 Rubredoxin signature 3 19 5.5E-8 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 RR42_RS20735 874ccd34d434fd7ab84e70e839bf8469 54 Gene3D G3DSA:2.20.28.10 1 52 6.3E-25 T 23-04-2016 IPR004039 Rubredoxin-type fold RR42_RS20735 874ccd34d434fd7ab84e70e839bf8469 54 PIRSF PIRSF000071 1 54 9.0E-23 T 23-04-2016 IPR024922 Rubredoxin GO:0005506|GO:0009055 RR42_RS20735 874ccd34d434fd7ab84e70e839bf8469 54 Pfam PF00301 Rubredoxin 4 49 1.2E-21 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 RR42_RS20735 874ccd34d434fd7ab84e70e839bf8469 54 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 23-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 RR42_RS10710 6d7fdb61d692ed33e023417b58683d35 447 PANTHER PTHR41983:SF2 1 442 5.6E-153 T 23-04-2016 RR42_RS10710 6d7fdb61d692ed33e023417b58683d35 447 Pfam PF02667 Short chain fatty acid transporter 2 441 1.1E-126 T 23-04-2016 IPR006160 Short chain fatty acid transporter AtoE RR42_RS10710 6d7fdb61d692ed33e023417b58683d35 447 PANTHER PTHR41983 1 442 5.6E-153 T 23-04-2016 RR42_RS18015 bf070fe3993bcf6930df3e11ecdd95d3 300 SMART SM00382 85 207 0.0089 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS18015 bf070fe3993bcf6930df3e11ecdd95d3 300 PANTHER PTHR13779:SF28 25 189 8.1E-75 T 23-04-2016 RR42_RS18015 bf070fe3993bcf6930df3e11ecdd95d3 300 PANTHER PTHR13779:SF28 217 288 8.1E-75 T 23-04-2016 RR42_RS18015 bf070fe3993bcf6930df3e11ecdd95d3 300 Pfam PF05673 Protein of unknown function (DUF815) 30 286 1.2E-104 T 23-04-2016 IPR008533 Domain of unknown function DUF815 RR42_RS18015 bf070fe3993bcf6930df3e11ecdd95d3 300 PANTHER PTHR13779 25 189 8.1E-75 T 23-04-2016 RR42_RS18015 bf070fe3993bcf6930df3e11ecdd95d3 300 PANTHER PTHR13779 217 288 8.1E-75 T 23-04-2016 RR42_RS18015 bf070fe3993bcf6930df3e11ecdd95d3 300 SUPERFAMILY SSF52540 47 194 5.13E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18015 bf070fe3993bcf6930df3e11ecdd95d3 300 Gene3D G3DSA:3.40.50.300 54 231 4.2E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS11605 8c66849998df47c0280451e6093ed226 214 SMART SM00749 8 71 6.4E-4 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria RR42_RS11605 8c66849998df47c0280451e6093ed226 214 SMART SM00749 81 144 4.8 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria RR42_RS11605 8c66849998df47c0280451e6093ed226 214 SMART SM00749 152 214 0.0019 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria RR42_RS11605 8c66849998df47c0280451e6093ed226 214 PANTHER PTHR34606 3 211 3.3E-41 T 23-04-2016 RR42_RS11605 8c66849998df47c0280451e6093ed226 214 PANTHER PTHR34606:SF2 3 211 3.3E-41 T 23-04-2016 RR42_RS11605 8c66849998df47c0280451e6093ed226 214 Pfam PF04972 BON domain 76 144 7.0E-20 T 23-04-2016 IPR007055 BON domain RR42_RS11605 8c66849998df47c0280451e6093ed226 214 Pfam PF04972 BON domain 150 213 7.5E-17 T 23-04-2016 IPR007055 BON domain RR42_RS11605 8c66849998df47c0280451e6093ed226 214 Pfam PF04972 BON domain 4 69 6.9E-16 T 23-04-2016 IPR007055 BON domain RR42_RS01230 f5ad7075ed7fdc5ce9943099be11da9c 246 Gene3D G3DSA:2.40.400.10 14 246 3.1E-92 T 23-04-2016 IPR023375 Acetoacetate decarboxylase beta barrel domain KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 RR42_RS01230 f5ad7075ed7fdc5ce9943099be11da9c 246 Pfam PF06314 Acetoacetate decarboxylase (ADC) 13 245 1.2E-80 T 23-04-2016 IPR010451 Acetoacetate decarboxylase GO:0016829 KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 RR42_RS01230 f5ad7075ed7fdc5ce9943099be11da9c 246 Hamap MF_00597 Probable acetoacetate decarboxylase [adc]. 7 246 57.311 T 23-04-2016 IPR023653 Acetoacetate decarboxylase, bacterial GO:0016831 KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 RR42_RS01230 f5ad7075ed7fdc5ce9943099be11da9c 246 SUPERFAMILY SSF160104 2 245 9.81E-87 T 23-04-2016 RR42_RS22315 79fb2fcf3e0af8d2d71b86ff08310d2a 146 Gene3D G3DSA:1.10.357.10 94 146 6.7E-11 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS22315 79fb2fcf3e0af8d2d71b86ff08310d2a 146 SUPERFAMILY SSF46689 93 146 1.33E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS22315 79fb2fcf3e0af8d2d71b86ff08310d2a 146 Pfam PF00440 Bacterial regulatory proteins, tetR family 97 142 1.1E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS05780 e9e2a21b6e6ffdaf1f2824b4699f9388 261 PANTHER PTHR30283 2 257 2.4E-99 T 23-04-2016 RR42_RS05780 e9e2a21b6e6ffdaf1f2824b4699f9388 261 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 258 35.567 T 23-04-2016 IPR005583 Peroxide stress protein YaaA RR42_RS05780 e9e2a21b6e6ffdaf1f2824b4699f9388 261 Pfam PF03883 Protein of unknown function (DUF328) 1 246 1.3E-85 T 23-04-2016 IPR005583 Peroxide stress protein YaaA RR42_RS05780 e9e2a21b6e6ffdaf1f2824b4699f9388 261 PANTHER PTHR30283:SF3 2 257 2.4E-99 T 23-04-2016 RR42_RS08460 140210e08906a1a17e272edc92ee1927 334 Gene3D G3DSA:1.10.443.10 164 328 7.7E-25 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RR42_RS08460 140210e08906a1a17e272edc92ee1927 334 PANTHER PTHR30349:SF20 98 331 1.6E-30 T 23-04-2016 RR42_RS08460 140210e08906a1a17e272edc92ee1927 334 PANTHER PTHR30349 98 331 1.6E-30 T 23-04-2016 RR42_RS08460 140210e08906a1a17e272edc92ee1927 334 Gene3D G3DSA:1.10.150.130 56 156 7.8E-4 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal RR42_RS08460 140210e08906a1a17e272edc92ee1927 334 SUPERFAMILY SSF56349 56 331 4.32E-45 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RR42_RS08460 140210e08906a1a17e272edc92ee1927 334 Pfam PF00589 Phage integrase family 168 325 4.9E-16 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RR42_RS14755 a3631b0c89240f78a29f803bc44048e1 208 SUPERFAMILY SSF158710 43 188 7.59E-47 T 23-04-2016 RR42_RS14755 a3631b0c89240f78a29f803bc44048e1 208 PANTHER PTHR38101:SF1 10 207 1.4E-53 T 23-04-2016 RR42_RS14755 a3631b0c89240f78a29f803bc44048e1 208 Pfam PF04751 Protein of unknown function (DUF615) 34 186 7.9E-52 T 23-04-2016 IPR006839 Ribosome-associated, YjgA RR42_RS14755 a3631b0c89240f78a29f803bc44048e1 208 Gene3D G3DSA:1.10.60.30 122 193 6.7E-28 T 23-04-2016 IPR023153 PSPTO4464-like domain RR42_RS14755 a3631b0c89240f78a29f803bc44048e1 208 Gene3D G3DSA:1.10.60.30 43 113 7.3E-29 T 23-04-2016 IPR023153 PSPTO4464-like domain RR42_RS14755 a3631b0c89240f78a29f803bc44048e1 208 PIRSF PIRSF016183 20 194 3.3E-63 T 23-04-2016 IPR006839 Ribosome-associated, YjgA RR42_RS14755 a3631b0c89240f78a29f803bc44048e1 208 PANTHER PTHR38101 10 207 1.4E-53 T 23-04-2016 RR42_RS14755 a3631b0c89240f78a29f803bc44048e1 208 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 25 190 21.644 T 23-04-2016 IPR006839 Ribosome-associated, YjgA RR42_RS10685 15639868691189a5f29638c5745d3b49 155 SUPERFAMILY SSF51735 1 154 2.69E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10685 15639868691189a5f29638c5745d3b49 155 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 63 82 3.9E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10685 15639868691189a5f29638c5745d3b49 155 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 37 53 3.9E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10685 15639868691189a5f29638c5745d3b49 155 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 137 3.9E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10685 15639868691189a5f29638c5745d3b49 155 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 101 3.9E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10685 15639868691189a5f29638c5745d3b49 155 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 6 153 1.9E-36 T 23-04-2016 RR42_RS10685 15639868691189a5f29638c5745d3b49 155 Gene3D G3DSA:3.40.50.720 1 155 3.7E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS10685 15639868691189a5f29638c5745d3b49 155 PANTHER PTHR24322 1 47 9.2E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS10685 15639868691189a5f29638c5745d3b49 155 PANTHER PTHR24322 63 94 9.2E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RR42_RS15765 baf9ac1dbafac0224656438b998be86a 300 SUPERFAMILY SSF51197 121 279 7.28E-10 T 23-04-2016 RR42_RS15765 baf9ac1dbafac0224656438b998be86a 300 Gene3D G3DSA:2.60.120.620 74 266 6.9E-6 T 23-04-2016 RR42_RS16695 d3a20010410c2d53cb4375e75898d492 145 Pfam PF03795 YCII-related domain 1 115 9.2E-24 T 23-04-2016 IPR005545 YCII-related RR42_RS16695 d3a20010410c2d53cb4375e75898d492 145 PANTHER PTHR35174 2 136 3.0E-74 T 23-04-2016 RR42_RS16695 d3a20010410c2d53cb4375e75898d492 145 SUPERFAMILY SSF54909 1 118 1.66E-36 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RR42_RS16695 d3a20010410c2d53cb4375e75898d492 145 PANTHER PTHR35174:SF1 2 136 3.0E-74 T 23-04-2016 RR42_RS16695 d3a20010410c2d53cb4375e75898d492 145 Gene3D G3DSA:3.30.70.1060 1 117 1.2E-41 T 23-04-2016 RR42_RS00670 2af38725615c0431e9f3e9c55c6939f9 393 Pfam PF04892 VanZ like family 38 138 2.2E-8 T 23-04-2016 IPR006976 VanZ-like RR42_RS11465 fb159f300a730121f7568348897aa9a9 230 Gene3D G3DSA:1.20.910.10 3 228 2.0E-110 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 RR42_RS11465 fb159f300a730121f7568348897aa9a9 230 PANTHER PTHR40279:SF2 6 228 9.1E-109 T 23-04-2016 RR42_RS11465 fb159f300a730121f7568348897aa9a9 230 PANTHER PTHR40279 6 228 9.1E-109 T 23-04-2016 RR42_RS11465 fb159f300a730121f7568348897aa9a9 230 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 230 135.322 T 23-04-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 RR42_RS11465 fb159f300a730121f7568348897aa9a9 230 Pfam PF03070 TENA/THI-4/PQQC family 14 223 8.0E-53 T 23-04-2016 IPR004305 Thiaminase-2/PQQC RR42_RS11465 fb159f300a730121f7568348897aa9a9 230 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 8 228 2.4E-101 T 23-04-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 RR42_RS11465 fb159f300a730121f7568348897aa9a9 230 SUPERFAMILY SSF48613 5 229 2.97E-70 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 RR42_RS31575 d8cada4506ee01bf014061e297bd6f65 238 Gene3D G3DSA:2.130.10.10 179 237 5.8E-9 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RR42_RS31575 d8cada4506ee01bf014061e297bd6f65 238 SUPERFAMILY SSF50974 157 237 1.78E-10 T 23-04-2016 IPR011045 Nitrous oxide reductase, N-terminal RR42_RS20255 c81bbe8197ee216c261bd923f1c96bca 252 Pfam PF01925 Sulfite exporter TauE/SafE 6 244 6.4E-40 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RR42_RS20255 c81bbe8197ee216c261bd923f1c96bca 252 PANTHER PTHR30269 1 252 1.7E-72 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RR42_RS20255 c81bbe8197ee216c261bd923f1c96bca 252 PANTHER PTHR30269:SF0 1 252 1.7E-72 T 23-04-2016 RR42_RS10970 fa1adea41db464e374ef741552b33c92 212 SMART SM01007 9 187 2.6E-52 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal RR42_RS10970 fa1adea41db464e374ef741552b33c92 212 Gene3D G3DSA:3.40.225.10 4 209 8.7E-63 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal RR42_RS10970 fa1adea41db464e374ef741552b33c92 212 PANTHER PTHR22789 1 208 1.8E-84 T 23-04-2016 RR42_RS10970 fa1adea41db464e374ef741552b33c92 212 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 186 3.7E-41 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal RR42_RS10970 fa1adea41db464e374ef741552b33c92 212 PANTHER PTHR22789:SF6 1 208 1.8E-84 T 23-04-2016 RR42_RS10970 fa1adea41db464e374ef741552b33c92 212 SUPERFAMILY SSF53639 4 209 1.96E-55 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal RR42_RS11835 d5eec98befb972828269ff718703540b 769 Pfam PF07244 Surface antigen variable number repeat 99 178 3.8E-14 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 RR42_RS11835 d5eec98befb972828269ff718703540b 769 Pfam PF07244 Surface antigen variable number repeat 182 269 8.7E-21 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 RR42_RS11835 d5eec98befb972828269ff718703540b 769 Pfam PF07244 Surface antigen variable number repeat 31 97 1.5E-5 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 RR42_RS11835 d5eec98befb972828269ff718703540b 769 Pfam PF07244 Surface antigen variable number repeat 353 427 3.5E-14 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 RR42_RS11835 d5eec98befb972828269ff718703540b 769 Pfam PF07244 Surface antigen variable number repeat 272 350 2.1E-12 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 RR42_RS11835 d5eec98befb972828269ff718703540b 769 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 7 769 25.335 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 RR42_RS11835 d5eec98befb972828269ff718703540b 769 Gene3D G3DSA:2.40.160.50 431 769 3.2E-24 T 23-04-2016 RR42_RS11835 d5eec98befb972828269ff718703540b 769 PANTHER PTHR12815 11 769 3.3E-231 T 23-04-2016 RR42_RS11835 d5eec98befb972828269ff718703540b 769 PANTHER PTHR12815:SF11 11 769 3.3E-231 T 23-04-2016 RR42_RS11835 d5eec98befb972828269ff718703540b 769 PIRSF PIRSF006076 2 769 3.6E-257 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 RR42_RS11835 d5eec98befb972828269ff718703540b 769 Pfam PF01103 Surface antigen 454 769 5.6E-75 T 23-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 RR42_RS11835 d5eec98befb972828269ff718703540b 769 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 30 769 5.1E-278 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 RR42_RS03900 250ddfbdb7233aa3459b81c062db5d84 374 PANTHER PTHR21716 16 358 9.1E-86 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like RR42_RS03900 250ddfbdb7233aa3459b81c062db5d84 374 Pfam PF01594 Domain of unknown function DUF20 12 342 1.6E-47 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like RR42_RS03900 250ddfbdb7233aa3459b81c062db5d84 374 PANTHER PTHR21716:SF20 16 358 9.1E-86 T 23-04-2016 RR42_RS13150 b99ee404a2ca5a9e8ba0577899a7df97 259 SUPERFAMILY SSF48452 46 202 2.02E-22 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS13150 b99ee404a2ca5a9e8ba0577899a7df97 259 Pfam PF13431 Tetratricopeptide repeat 171 200 2.6E-5 T 23-04-2016 RR42_RS13150 b99ee404a2ca5a9e8ba0577899a7df97 259 SMART SM00028 179 209 160.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RR42_RS13150 b99ee404a2ca5a9e8ba0577899a7df97 259 SMART SM00028 145 178 7.8 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RR42_RS13150 b99ee404a2ca5a9e8ba0577899a7df97 259 SMART SM00028 109 142 69.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RR42_RS13150 b99ee404a2ca5a9e8ba0577899a7df97 259 SMART SM00028 41 74 6.7 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RR42_RS13150 b99ee404a2ca5a9e8ba0577899a7df97 259 SMART SM00028 75 108 0.41 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RR42_RS13150 b99ee404a2ca5a9e8ba0577899a7df97 259 Pfam PF13432 Tetratricopeptide repeat 82 141 3.3E-5 T 23-04-2016 RR42_RS13150 b99ee404a2ca5a9e8ba0577899a7df97 259 Gene3D G3DSA:1.25.40.10 44 230 1.6E-32 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS13150 b99ee404a2ca5a9e8ba0577899a7df97 259 PANTHER PTHR23083 40 228 4.4E-26 T 23-04-2016 RR42_RS13150 b99ee404a2ca5a9e8ba0577899a7df97 259 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 8 244 8.2E-67 T 23-04-2016 IPR013360 Pilus biogenesis/stability type IV, PilW RR42_RS08055 65215491e2227cf1c90e150742df1043 205 Gene3D G3DSA:3.30.420.10 4 201 1.1E-22 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS08055 65215491e2227cf1c90e150742df1043 205 SUPERFAMILY SSF53098 1 201 2.69E-28 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS08055 65215491e2227cf1c90e150742df1043 205 SMART SM00479 3 203 5.9E-4 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RR42_RS08055 65215491e2227cf1c90e150742df1043 205 Pfam PF00929 Exonuclease 6 144 2.2E-9 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RR42_RS15680 9e2cdbbce393b633e1813f273900f38f 437 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 212 3.4E-63 T 23-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 RR42_RS15680 9e2cdbbce393b633e1813f273900f38f 437 SUPERFAMILY SSF53756 59 224 2.41E-13 T 23-04-2016 RR42_RS15680 9e2cdbbce393b633e1813f273900f38f 437 SUPERFAMILY SSF53756 255 415 2.41E-13 T 23-04-2016 RR42_RS15680 9e2cdbbce393b633e1813f273900f38f 437 PANTHER PTHR23417:SF2 193 433 7.1E-84 T 23-04-2016 RR42_RS15680 9e2cdbbce393b633e1813f273900f38f 437 PANTHER PTHR23417:SF2 1 114 7.1E-84 T 23-04-2016 RR42_RS15680 9e2cdbbce393b633e1813f273900f38f 437 PANTHER PTHR23417:SF2 133 143 7.1E-84 T 23-04-2016 RR42_RS15680 9e2cdbbce393b633e1813f273900f38f 437 PANTHER PTHR23417 193 433 7.1E-84 T 23-04-2016 RR42_RS15680 9e2cdbbce393b633e1813f273900f38f 437 PANTHER PTHR23417 1 114 7.1E-84 T 23-04-2016 RR42_RS15680 9e2cdbbce393b633e1813f273900f38f 437 PANTHER PTHR23417 133 143 7.1E-84 T 23-04-2016 RR42_RS08495 fc11a1774f45351d652580603074c09f 82 Pfam PF04606 Ogr/Delta-like zinc finger 5 50 7.7E-19 T 23-04-2016 IPR007684 Zinc finger, Ogr/Delta-type RR42_RS07940 906ef9b18ead07254cc68c13b28a42b0 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 20 67 2.0E-11 T 23-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RR42_RS07940 906ef9b18ead07254cc68c13b28a42b0 295 Gene3D G3DSA:1.10.3720.10 89 291 7.9E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS07940 906ef9b18ead07254cc68c13b28a42b0 295 SUPERFAMILY SSF161098 90 277 6.41E-23 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS07940 906ef9b18ead07254cc68c13b28a42b0 295 PANTHER PTHR30465:SF10 13 295 6.2E-102 T 23-04-2016 RR42_RS07940 906ef9b18ead07254cc68c13b28a42b0 295 PANTHER PTHR30465 13 295 6.2E-102 T 23-04-2016 RR42_RS07940 906ef9b18ead07254cc68c13b28a42b0 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 288 4.4E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS13180 2ddcc66a9832b143eac90672edffeb04 282 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 47 264 1.1E-85 T 23-04-2016 IPR019288 Predicted 3'-5' exonuclease, PolB-like RR42_RS13180 2ddcc66a9832b143eac90672edffeb04 282 Gene3D G3DSA:3.30.420.10 4 224 3.9E-29 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS13180 2ddcc66a9832b143eac90672edffeb04 282 SUPERFAMILY SSF53098 3 232 1.11E-41 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RR42_RS07180 9d0bb09cbaa86835df058bff579fc762 222 SUPERFAMILY SSF53955 8 164 1.12E-5 T 23-04-2016 IPR023346 Lysozyme-like domain RR42_RS07180 9d0bb09cbaa86835df058bff579fc762 222 Gene3D G3DSA:1.10.530.10 45 215 2.4E-5 T 23-04-2016 RR42_RS06030 a9d9fa502a2c059b19b6f2ee798f7c97 133 PANTHER PTHR10093 1 126 1.4E-96 T 23-04-2016 RR42_RS06030 a9d9fa502a2c059b19b6f2ee798f7c97 133 Gene3D G3DSA:3.90.1010.10 2 128 7.5E-57 T 23-04-2016 RR42_RS06030 a9d9fa502a2c059b19b6f2ee798f7c97 133 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 8.3E-70 T 23-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 RR42_RS06030 a9d9fa502a2c059b19b6f2ee798f7c97 133 Pfam PF01592 NifU-like N terminal domain 3 125 1.3E-56 T 23-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 RR42_RS06030 a9d9fa502a2c059b19b6f2ee798f7c97 133 PANTHER PTHR10093:SF3 1 126 1.4E-96 T 23-04-2016 RR42_RS06030 a9d9fa502a2c059b19b6f2ee798f7c97 133 SUPERFAMILY SSF82649 2 125 1.36E-48 T 23-04-2016 RR42_RS03930 9589a897488eac9c1c481a223d215930 338 PANTHER PTHR21266 6 293 4.4E-46 T 23-04-2016 RR42_RS03930 9589a897488eac9c1c481a223d215930 338 Pfam PF00355 Rieske [2Fe-2S] domain 13 94 7.0E-19 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RR42_RS03930 9589a897488eac9c1c481a223d215930 338 SUPERFAMILY SSF50022 6 128 1.44E-33 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RR42_RS03930 9589a897488eac9c1c481a223d215930 338 Gene3D G3DSA:2.102.10.10 10 128 1.8E-30 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RR42_RS03930 9589a897488eac9c1c481a223d215930 338 SUPERFAMILY SSF55961 119 333 9.42E-31 T 23-04-2016 RR42_RS15785 5f63d3840d05455fbdac4f918cb2bd9e 361 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 196 341 2.6E-9 T 23-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RR42_RS15785 5f63d3840d05455fbdac4f918cb2bd9e 361 PANTHER PTHR21015 14 358 8.3E-12 T 23-04-2016 RR42_RS15785 5f63d3840d05455fbdac4f918cb2bd9e 361 Gene3D G3DSA:3.40.50.2000 173 341 5.5E-19 T 23-04-2016 RR42_RS15785 5f63d3840d05455fbdac4f918cb2bd9e 361 Gene3D G3DSA:3.40.50.2000 15 105 1.1E-6 T 23-04-2016 RR42_RS15785 5f63d3840d05455fbdac4f918cb2bd9e 361 SUPERFAMILY SSF53756 14 358 7.18E-16 T 23-04-2016 RR42_RS15785 5f63d3840d05455fbdac4f918cb2bd9e 361 TIGRFAM TIGR03590 PseG: UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase 1 299 2.7E-96 T 23-04-2016 IPR020023 UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase RR42_RS14185 6c16a4bad4d60468460a510282312e89 490 Pfam PF02646 RmuC family 184 473 5.2E-80 T 23-04-2016 IPR003798 DNA recombination RmuC RR42_RS14185 6c16a4bad4d60468460a510282312e89 490 PANTHER PTHR30563 10 484 4.2E-91 T 23-04-2016 RR42_RS08585 4fbff24ddee32096753fc667d424982c 120 Pfam PF04965 Gene 25-like lysozyme 18 98 1.4E-16 T 23-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD RR42_RS08585 4fbff24ddee32096753fc667d424982c 120 SUPERFAMILY SSF160719 13 108 4.18E-27 T 23-04-2016 RR42_RS08585 4fbff24ddee32096753fc667d424982c 120 PANTHER PTHR35862:SF2 4 97 2.4E-27 T 23-04-2016 RR42_RS08585 4fbff24ddee32096753fc667d424982c 120 PANTHER PTHR35862 4 97 2.4E-27 T 23-04-2016 RR42_RS08585 4fbff24ddee32096753fc667d424982c 120 Gene3D G3DSA:3.10.450.40 12 103 1.7E-30 T 23-04-2016 RR42_RS21900 62fc6460d16aab51fe5d10fe25fe8eb0 201 PANTHER PTHR30069 4 201 1.0E-50 T 23-04-2016 RR42_RS21900 62fc6460d16aab51fe5d10fe25fe8eb0 201 SUPERFAMILY SSF56935 2 189 1.83E-5 T 23-04-2016 RR42_RS21900 62fc6460d16aab51fe5d10fe25fe8eb0 201 PANTHER PTHR30069:SF13 4 201 1.0E-50 T 23-04-2016 RR42_RS20280 a98c2ea9d252b016d9c8a86de9080fdc 241 SMART SM00382 31 220 1.8E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS20280 a98c2ea9d252b016d9c8a86de9080fdc 241 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS20280 a98c2ea9d252b016d9c8a86de9080fdc 241 Gene3D G3DSA:3.40.50.300 3 231 1.7E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20280 a98c2ea9d252b016d9c8a86de9080fdc 241 SUPERFAMILY SSF52540 5 234 3.28E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20280 a98c2ea9d252b016d9c8a86de9080fdc 241 Pfam PF00005 ABC transporter 22 168 5.1E-24 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS20280 a98c2ea9d252b016d9c8a86de9080fdc 241 PANTHER PTHR24220 8 230 4.1E-88 T 23-04-2016 RR42_RS20280 a98c2ea9d252b016d9c8a86de9080fdc 241 PANTHER PTHR24220:SF469 8 230 4.1E-88 T 23-04-2016 RR42_RS13360 281cab69c4a4577e197a457805bb3d71 316 PANTHER PTHR14226 49 306 1.8E-72 T 23-04-2016 RR42_RS13360 281cab69c4a4577e197a457805bb3d71 316 Pfam PF01734 Patatin-like phospholipase 52 213 6.7E-29 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RR42_RS13360 281cab69c4a4577e197a457805bb3d71 316 PANTHER PTHR14226:SF24 49 306 1.8E-72 T 23-04-2016 RR42_RS13360 281cab69c4a4577e197a457805bb3d71 316 SUPERFAMILY SSF52151 43 302 9.59E-63 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RR42_RS13360 281cab69c4a4577e197a457805bb3d71 316 Gene3D G3DSA:3.40.1090.10 45 213 1.1E-18 T 23-04-2016 RR42_RS37775 c374533a23aad608decc3fc7b2627a41 158 SUPERFAMILY SSF54523 1 83 1.1E-14 T 23-04-2016 RR42_RS37775 c374533a23aad608decc3fc7b2627a41 158 Gene3D G3DSA:3.30.700.10 1 74 2.7E-5 T 23-04-2016 RR42_RS37775 c374533a23aad608decc3fc7b2627a41 158 Pfam PF12019 Type II transport protein GspH 31 148 9.1E-18 T 23-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RR42_RS01405 addcee9a0ca50573f1352cf5d25da8c4 650 Pfam PF01464 Transglycosylase SLT domain 482 588 4.1E-23 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 RR42_RS01405 addcee9a0ca50573f1352cf5d25da8c4 650 Pfam PF14718 Soluble lytic murein transglycosylase L domain 404 464 7.1E-6 T 23-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 RR42_RS01405 addcee9a0ca50573f1352cf5d25da8c4 650 Gene3D G3DSA:1.10.530.10 472 634 1.4E-48 T 23-04-2016 RR42_RS01405 addcee9a0ca50573f1352cf5d25da8c4 650 Gene3D G3DSA:1.10.1240.20 404 460 2.3E-5 T 23-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 RR42_RS01405 addcee9a0ca50573f1352cf5d25da8c4 650 SUPERFAMILY SSF48435 47 473 1.03E-103 T 23-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 RR42_RS01405 addcee9a0ca50573f1352cf5d25da8c4 650 PANTHER PTHR21666 462 639 6.7E-36 T 23-04-2016 RR42_RS01405 addcee9a0ca50573f1352cf5d25da8c4 650 SUPERFAMILY SSF53955 475 637 1.9E-48 T 23-04-2016 IPR023346 Lysozyme-like domain RR42_RS01405 addcee9a0ca50573f1352cf5d25da8c4 650 Gene3D G3DSA:1.25.20.10 236 385 5.3E-40 T 23-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 RR42_RS01405 addcee9a0ca50573f1352cf5d25da8c4 650 Gene3D G3DSA:1.25.20.10 48 234 1.7E-44 T 23-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 RR42_RS03185 89cd4f33ef0339831d6b42cce1756e17 276 Pfam PF03591 AzlC protein 33 174 4.7E-31 T 23-04-2016 IPR011606 Branched-chain amino acid transport, permease RR42_RS03185 89cd4f33ef0339831d6b42cce1756e17 276 PANTHER PTHR34979 5 251 7.0E-24 T 23-04-2016 RR42_RS20000 bb03a4e77aeaad8da32ad54bebddd7e7 163 Pfam PF01464 Transglycosylase SLT domain 40 135 2.8E-17 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 RR42_RS20000 bb03a4e77aeaad8da32ad54bebddd7e7 163 SUPERFAMILY SSF53955 38 157 1.31E-37 T 23-04-2016 IPR023346 Lysozyme-like domain RR42_RS20000 bb03a4e77aeaad8da32ad54bebddd7e7 163 PANTHER PTHR11407 8 95 1.2E-12 T 23-04-2016 RR42_RS20000 bb03a4e77aeaad8da32ad54bebddd7e7 163 PANTHER PTHR11407:SF34 8 95 1.2E-12 T 23-04-2016 RR42_RS20000 bb03a4e77aeaad8da32ad54bebddd7e7 163 Gene3D G3DSA:1.10.530.10 38 137 1.6E-18 T 23-04-2016 RR42_RS07410 f5ac3b6d9fb554f55a8483e32f7b9c9f 382 Gene3D G3DSA:3.40.710.10 102 343 1.0E-66 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS07410 f5ac3b6d9fb554f55a8483e32f7b9c9f 382 PANTHER PTHR21581:SF8 106 355 2.2E-84 T 23-04-2016 RR42_RS07410 f5ac3b6d9fb554f55a8483e32f7b9c9f 382 PANTHER PTHR21581 106 355 2.2E-84 T 23-04-2016 RR42_RS07410 f5ac3b6d9fb554f55a8483e32f7b9c9f 382 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 102 326 7.6E-54 T 23-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 RR42_RS07410 f5ac3b6d9fb554f55a8483e32f7b9c9f 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 184 201 7.0E-11 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RR42_RS07410 f5ac3b6d9fb554f55a8483e32f7b9c9f 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 134 145 7.0E-11 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RR42_RS07410 f5ac3b6d9fb554f55a8483e32f7b9c9f 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 211 224 7.0E-11 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RR42_RS07410 f5ac3b6d9fb554f55a8483e32f7b9c9f 382 SUPERFAMILY SSF56601 106 343 3.8E-58 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RR42_RS24995 4bd770229300aac167daeceb68906805 259 SMART SM00073 137 234 4.5E-11 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RR42_RS24995 4bd770229300aac167daeceb68906805 259 SUPERFAMILY SSF47226 136 254 1.57E-25 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RR42_RS24995 4bd770229300aac167daeceb68906805 259 Gene3D G3DSA:1.20.120.160 128 231 3.1E-25 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RR42_RS24995 4bd770229300aac167daeceb68906805 259 Pfam PF01627 Hpt domain 139 232 3.8E-16 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RR42_RS20130 a8686ae954b843e7289044169d250d6f 763 Pfam PF00270 DEAD/DEAH box helicase 231 385 4.4E-13 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RR42_RS20130 a8686ae954b843e7289044169d250d6f 763 Hamap MF_00983 Probable primosomal protein N' [priA]. 22 763 23.114 T 23-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 RR42_RS20130 a8686ae954b843e7289044169d250d6f 763 PANTHER PTHR30580 10 763 6.2E-215 T 23-04-2016 RR42_RS20130 a8686ae954b843e7289044169d250d6f 763 SUPERFAMILY SSF52540 534 629 2.6E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20130 a8686ae954b843e7289044169d250d6f 763 SUPERFAMILY SSF52540 417 471 2.6E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20130 a8686ae954b843e7289044169d250d6f 763 SUPERFAMILY SSF52540 240 387 2.6E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20130 a8686ae954b843e7289044169d250d6f 763 Pfam PF00271 Helicase conserved C-terminal domain 524 620 2.4E-8 T 23-04-2016 IPR001650 Helicase, C-terminal RR42_RS20130 a8686ae954b843e7289044169d250d6f 763 SMART SM00487 218 418 2.3E-17 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RR42_RS20130 a8686ae954b843e7289044169d250d6f 763 Gene3D G3DSA:3.40.50.300 438 459 1.4E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20130 a8686ae954b843e7289044169d250d6f 763 Gene3D G3DSA:3.40.50.300 524 664 1.4E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS20130 a8686ae954b843e7289044169d250d6f 763 SMART SM00490 523 620 1.3E-9 T 23-04-2016 IPR001650 Helicase, C-terminal RR42_RS20130 a8686ae954b843e7289044169d250d6f 763 TIGRFAM TIGR00595 priA: primosomal protein N' 243 761 6.4E-175 T 23-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 RR42_RS20130 a8686ae954b843e7289044169d250d6f 763 Gene3D G3DSA:3.40.50.300 221 405 3.8E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03970 f3e1128edff3e185e58a48bdc90dde90 272 PANTHER PTHR22916 1 153 4.9E-13 T 23-04-2016 RR42_RS03970 f3e1128edff3e185e58a48bdc90dde90 272 SUPERFAMILY SSF53448 4 151 1.41E-21 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RR42_RS03970 f3e1128edff3e185e58a48bdc90dde90 272 Pfam PF00535 Glycosyl transferase family 2 7 146 2.4E-11 T 23-04-2016 IPR001173 Glycosyltransferase 2-like RR42_RS03970 f3e1128edff3e185e58a48bdc90dde90 272 Gene3D G3DSA:3.90.550.10 5 118 6.7E-10 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RR42_RS06995 b82502c732cb082407408e019de5ac9b 238 PANTHER PTHR23028 9 215 3.6E-13 T 23-04-2016 RR42_RS06995 b82502c732cb082407408e019de5ac9b 238 PANTHER PTHR23028:SF53 9 215 3.6E-13 T 23-04-2016 RR42_RS06995 b82502c732cb082407408e019de5ac9b 238 Pfam PF01757 Acyltransferase family 10 213 6.2E-11 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 RR42_RS05590 90cd1910f7190cd20b900bc9ae1d9b88 149 PIRSF PIRSF032131 1 146 4.5E-47 T 23-04-2016 IPR009562 Protein of unknown function DUF1178 RR42_RS05590 90cd1910f7190cd20b900bc9ae1d9b88 149 Pfam PF06676 Protein of unknown function (DUF1178) 1 141 1.8E-49 T 23-04-2016 IPR009562 Protein of unknown function DUF1178 RR42_RS05295 cb3d8780e0c5b0fb0beeb28c532c1752 336 Pfam PF10282 Lactonase, 7-bladed beta-propeller 154 303 3.0E-10 T 23-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 RR42_RS05295 cb3d8780e0c5b0fb0beeb28c532c1752 336 Pfam PF10282 Lactonase, 7-bladed beta-propeller 42 90 2.2E-4 T 23-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 RR42_RS05295 cb3d8780e0c5b0fb0beeb28c532c1752 336 PANTHER PTHR13833 32 307 2.0E-19 T 23-04-2016 RR42_RS05295 cb3d8780e0c5b0fb0beeb28c532c1752 336 Gene3D G3DSA:2.130.10.10 27 317 1.1E-54 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RR42_RS05295 cb3d8780e0c5b0fb0beeb28c532c1752 336 SUPERFAMILY SSF50974 3 336 9.42E-68 T 23-04-2016 IPR011045 Nitrous oxide reductase, N-terminal RR42_RS17905 369ffcd236b12999919bde9f06aad3a3 211 PANTHER PTHR30086 1 211 2.9E-33 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RR42_RS17905 369ffcd236b12999919bde9f06aad3a3 211 Pfam PF01810 LysE type translocator 9 204 6.7E-26 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RR42_RS08635 be1a107fa2a742be9dcbe939b1772525 240 Pfam PF05944 Phage small terminase subunit 37 166 3.5E-48 T 23-04-2016 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 RR42_RS02960 414413ee48c82c51282aa036d4e11046 282 TIGRFAM TIGR03132 malonate_mdcB: triphosphoribosyl-dephospho-CoA synthase MdcB 2 267 2.8E-98 T 23-04-2016 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 RR42_RS02960 414413ee48c82c51282aa036d4e11046 282 PANTHER PTHR30201 2 275 1.0E-72 T 23-04-2016 RR42_RS02960 414413ee48c82c51282aa036d4e11046 282 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 4 265 6.2E-71 T 23-04-2016 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 RR42_RS02960 414413ee48c82c51282aa036d4e11046 282 Hamap MF_01883 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [mdcB]. 1 282 137.903 T 23-04-2016 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 RR42_RS13200 4aca55d536f48227ae601af068bdbdb2 250 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 250 37.561 T 23-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RR42_RS13200 4aca55d536f48227ae601af068bdbdb2 250 Gene3D G3DSA:3.40.1210.10 1 249 4.8E-85 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RR42_RS13200 4aca55d536f48227ae601af068bdbdb2 250 PANTHER PTHR30457 1 250 4.5E-89 T 23-04-2016 RR42_RS13200 4aca55d536f48227ae601af068bdbdb2 250 SUPERFAMILY SSF64167 1 249 2.75E-83 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RR42_RS13200 4aca55d536f48227ae601af068bdbdb2 250 Pfam PF01975 Survival protein SurE 3 186 2.4E-56 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RR42_RS13200 4aca55d536f48227ae601af068bdbdb2 250 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 237 1.7E-64 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RR42_RS25810 0c0518168ae53f38040b334015d7b6bd 83 PANTHER PTHR30349:SF37 20 82 2.8E-14 T 23-04-2016 RR42_RS25810 0c0518168ae53f38040b334015d7b6bd 83 PANTHER PTHR30349 20 82 2.8E-14 T 23-04-2016 RR42_RS17730 288166df08a82d161d11b31c7ee3701c 193 Pfam PF07382 Histone H1-like nucleoprotein HC2 4 192 3.0E-19 T 23-04-2016 IPR009970 Histone H1-like nucleoprotein HC2 GO:0003677|GO:0030261 RR42_RS17730 288166df08a82d161d11b31c7ee3701c 193 PRINTS PR00624 Histone H5 signature 156 175 6.5E-6 T 23-04-2016 IPR005819 Histone H5 GO:0000786|GO:0003677|GO:0006334 RR42_RS17730 288166df08a82d161d11b31c7ee3701c 193 PRINTS PR00624 Histone H5 signature 103 117 6.5E-6 T 23-04-2016 IPR005819 Histone H5 GO:0000786|GO:0003677|GO:0006334 RR42_RS17730 288166df08a82d161d11b31c7ee3701c 193 PRINTS PR00624 Histone H5 signature 134 151 6.5E-6 T 23-04-2016 IPR005819 Histone H5 GO:0000786|GO:0003677|GO:0006334 RR42_RS17730 288166df08a82d161d11b31c7ee3701c 193 PRINTS PR00624 Histone H5 signature 20 37 6.5E-6 T 23-04-2016 IPR005819 Histone H5 GO:0000786|GO:0003677|GO:0006334 RR42_RS37790 4a857abb71cd83c208736e0efbd21e5e 273 TIGRFAM TIGR02681 phage_pRha: phage regulatory protein, Rha family 31 129 6.7E-16 T 23-04-2016 IPR014054 Bacteriophage regulatory protein, Rha family RR42_RS37790 4a857abb71cd83c208736e0efbd21e5e 273 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 40 124 9.6E-13 T 23-04-2016 IPR014054 Bacteriophage regulatory protein, Rha family RR42_RS19685 d5a42748fe151ae7fe162616695001ac 103 SUPERFAMILY SSF81296 1 102 1.15E-32 T 23-04-2016 IPR014756 Immunoglobulin E-set RR42_RS19685 d5a42748fe151ae7fe162616695001ac 103 Pfam PF08770 Sulphur oxidation protein SoxZ 7 100 4.8E-37 T 23-04-2016 IPR014880 Sulphur oxidation protein SoxZ RR42_RS19685 d5a42748fe151ae7fe162616695001ac 103 Gene3D G3DSA:2.60.40.10 4 102 1.8E-37 T 23-04-2016 IPR013783 Immunoglobulin-like fold RR42_RS19685 d5a42748fe151ae7fe162616695001ac 103 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 6 102 9.5E-40 T 23-04-2016 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ RR42_RS15470 e8a184da02fb6e5597a15528210d81b4 145 PANTHER PTHR30558 1 144 1.6E-33 T 23-04-2016 RR42_RS15470 e8a184da02fb6e5597a15528210d81b4 145 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 144 1.5E-27 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RR42_RS15470 e8a184da02fb6e5597a15528210d81b4 145 TIGRFAM TIGR02801 tolR: protein TolR 15 142 9.7E-41 T 23-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 RR42_RS15470 e8a184da02fb6e5597a15528210d81b4 145 PANTHER PTHR30558:SF7 1 144 1.6E-33 T 23-04-2016 RR42_RS07550 137f5fce62ce18aa1fe623341c863869 239 Gene3D G3DSA:3.40.50.300 5 231 1.7E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS07550 137f5fce62ce18aa1fe623341c863869 239 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS07550 137f5fce62ce18aa1fe623341c863869 239 Pfam PF00005 ABC transporter 23 167 8.6E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS07550 137f5fce62ce18aa1fe623341c863869 239 PANTHER PTHR24220 9 239 5.6E-91 T 23-04-2016 RR42_RS07550 137f5fce62ce18aa1fe623341c863869 239 SMART SM00382 32 216 6.7E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS07550 137f5fce62ce18aa1fe623341c863869 239 PANTHER PTHR24220:SF568 9 239 5.6E-91 T 23-04-2016 RR42_RS07550 137f5fce62ce18aa1fe623341c863869 239 SUPERFAMILY SSF52540 7 236 3.82E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01310 7897e62cff641389766dfbcbf3314980 377 PANTHER PTHR20857 165 374 3.9E-36 T 23-04-2016 RR42_RS01310 7897e62cff641389766dfbcbf3314980 377 Gene3D G3DSA:3.20.20.70 165 372 2.3E-49 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS01310 7897e62cff641389766dfbcbf3314980 377 Pfam PF02581 Thiamine monophosphate synthase/TENI 179 357 4.7E-43 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RR42_RS01310 7897e62cff641389766dfbcbf3314980 377 SUPERFAMILY SSF51391 170 372 1.31E-45 T 23-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RR42_RS12210 601340380bcccb47fc370dba7e66e153 133 Gene3D G3DSA:3.10.490.10 3 132 2.9E-28 T 23-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like RR42_RS12210 601340380bcccb47fc370dba7e66e153 133 SUPERFAMILY SSF110857 1 131 2.49E-28 T 23-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like RR42_RS12210 601340380bcccb47fc370dba7e66e153 133 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 4 127 3.4E-20 T 23-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like RR42_RS04875 8b7713f38fcf51ab03d10f1aebb0010b 173 Pfam PF05433 Glycine zipper 2TM domain 84 124 3.4E-11 T 23-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 RR42_RS04875 8b7713f38fcf51ab03d10f1aebb0010b 173 PANTHER PTHR35603 58 171 5.2E-16 T 23-04-2016 RR42_RS00245 625188bb5c8273c691587f09c5ede44d 493 Pfam PF07171 MlrC C-terminus 296 477 4.9E-53 T 23-04-2016 IPR010799 Microcystin LR degradation protein MlrC, C-terminal RR42_RS00245 625188bb5c8273c691587f09c5ede44d 493 PIRSF PIRSF012702 1 492 5.5E-164 T 23-04-2016 IPR009197 Microcystin LR degradation protein MlrC RR42_RS00245 625188bb5c8273c691587f09c5ede44d 493 Pfam PF07364 Metallopeptidase family M81 2 282 1.3E-97 T 23-04-2016 IPR015995 Microcystin LR degradation protein MlrC, N-terminal RR42_RS08490 e0583704f4bbd89435532d16e0b922e0 182 Pfam PF02498 BRO family, N-terminal domain 17 106 2.1E-13 T 23-04-2016 IPR003497 BRO N-terminal domain RR42_RS08490 e0583704f4bbd89435532d16e0b922e0 182 SMART SM01040 16 109 2.9E-26 T 23-04-2016 IPR003497 BRO N-terminal domain RR42_RS14335 aa6d9b2ab0a8972eaba1b255e9142fc2 247 SUPERFAMILY SSF110997 171 245 7.85E-11 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 RR42_RS14335 aa6d9b2ab0a8972eaba1b255e9142fc2 247 Pfam PF05036 Sporulation related domain 172 245 2.1E-10 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 RR42_RS14335 aa6d9b2ab0a8972eaba1b255e9142fc2 247 Gene3D G3DSA:3.30.70.1070 168 245 3.3E-10 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 RR42_RS02640 b7377646c0073b1da3dd50aebf474f33 137 Pfam PF04519 Polymer-forming cytoskeletal 13 113 8.2E-28 T 23-04-2016 IPR007607 Protein of unknown function DUF583 RR42_RS02640 b7377646c0073b1da3dd50aebf474f33 137 PANTHER PTHR35024 6 112 7.3E-27 T 23-04-2016 RR42_RS08485 a0ab0c0f137df407ca51e9ad4965cc8b 901 SUPERFAMILY SSF56731 174 258 1.15E-6 T 23-04-2016 RR42_RS08485 a0ab0c0f137df407ca51e9ad4965cc8b 901 Gene3D G3DSA:3.40.1360.10 175 278 3.9E-11 T 23-04-2016 RR42_RS08485 a0ab0c0f137df407ca51e9ad4965cc8b 901 Pfam PF13155 Toprim-like 179 275 1.1E-15 T 23-04-2016 RR42_RS08485 a0ab0c0f137df407ca51e9ad4965cc8b 901 SUPERFAMILY SSF52540 544 680 8.26E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS25955 d0987bda6f711bbc32c80bee1a4498da 132 Pfam PF00034 Cytochrome c 33 103 1.2E-4 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS25955 d0987bda6f711bbc32c80bee1a4498da 132 PANTHER PTHR33751:SF3 24 106 2.8E-19 T 23-04-2016 RR42_RS25955 d0987bda6f711bbc32c80bee1a4498da 132 Gene3D G3DSA:1.10.760.10 27 104 9.7E-23 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS25955 d0987bda6f711bbc32c80bee1a4498da 132 SUPERFAMILY SSF46626 25 104 9.46E-17 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS25955 d0987bda6f711bbc32c80bee1a4498da 132 PANTHER PTHR33751 24 106 2.8E-19 T 23-04-2016 RR42_RS17850 b7e370316b271d9026272394de98cc6e 106 Gene3D G3DSA:3.40.30.10 12 104 7.7E-17 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS17850 b7e370316b271d9026272394de98cc6e 106 SUPERFAMILY SSF52833 19 104 3.59E-19 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS17850 b7e370316b271d9026272394de98cc6e 106 Pfam PF00085 Thioredoxin 14 101 4.6E-13 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 RR42_RS10385 4041e90cfeba21b80f52d45d828a51b9 403 PANTHER PTHR30483:SF13 10 394 1.9E-77 T 23-04-2016 RR42_RS10385 4041e90cfeba21b80f52d45d828a51b9 403 Gene3D G3DSA:3.40.50.2300 21 215 2.1E-37 T 23-04-2016 RR42_RS10385 4041e90cfeba21b80f52d45d828a51b9 403 SUPERFAMILY SSF53822 20 374 1.81E-72 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RR42_RS10385 4041e90cfeba21b80f52d45d828a51b9 403 PANTHER PTHR30483 10 394 1.9E-77 T 23-04-2016 RR42_RS10385 4041e90cfeba21b80f52d45d828a51b9 403 Pfam PF13458 Periplasmic binding protein 21 354 5.6E-61 T 23-04-2016 IPR028081 Leucine-binding protein domain RR42_RS19915 a3c2893c22396a69cd40a11d513d1cb2 344 Pfam PF09851 Short C-terminal domain 313 339 4.4E-7 T 23-04-2016 IPR018649 SHOCT domain RR42_RS19915 a3c2893c22396a69cd40a11d513d1cb2 344 SUPERFAMILY SSF117892 90 231 1.96E-11 T 23-04-2016 IPR001107 Band 7 domain RR42_RS19915 a3c2893c22396a69cd40a11d513d1cb2 344 PANTHER PTHR37826:SF2 5 301 3.8E-65 T 23-04-2016 RR42_RS19915 a3c2893c22396a69cd40a11d513d1cb2 344 PANTHER PTHR37826 5 301 3.8E-65 T 23-04-2016 RR42_RS19915 a3c2893c22396a69cd40a11d513d1cb2 344 Pfam PF13421 SPFH domain-Band 7 family 26 235 3.6E-77 T 23-04-2016 RR42_RS00680 4e0bf453de63e02ba8de94ebfba3e07c 313 PANTHER PTHR36698 3 313 1.1E-42 T 23-04-2016 RR42_RS00680 4e0bf453de63e02ba8de94ebfba3e07c 313 PANTHER PTHR36698:SF2 3 313 1.1E-42 T 23-04-2016 RR42_RS00680 4e0bf453de63e02ba8de94ebfba3e07c 313 Pfam PF02470 MlaD protein 45 114 2.2E-13 T 23-04-2016 IPR003399 Mce/MlaD RR42_RS06430 003dc057cc32c85d11251ea1f93a7004 76 Pfam PF09916 Uncharacterized protein conserved in bacteria (DUF2145) 2 60 4.7E-21 T 23-04-2016 IPR014547 Uncharacterised conserved protein UCP028477 RR42_RS30815 838cfa99615eb46ea2524606824cfeca 219 Pfam PF02447 GntP family permease 26 123 3.0E-5 T 23-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RR42_RS30815 838cfa99615eb46ea2524606824cfeca 219 PANTHER PTHR30354 5 218 1.1E-101 T 23-04-2016 RR42_RS30815 838cfa99615eb46ea2524606824cfeca 219 PANTHER PTHR30354:SF7 5 218 1.1E-101 T 23-04-2016 RR42_RS08090 9c2f80d76c625c8b2a89d0046109590f 264 Pfam PF12705 PD-(D/E)XK nuclease superfamily 8 261 5.6E-16 T 23-04-2016 RR42_RS18955 2c79a04d2c2aa902eb806b7914f4a9ef 276 PANTHER PTHR30035:SF3 12 236 2.0E-74 T 23-04-2016 RR42_RS18955 2c79a04d2c2aa902eb806b7914f4a9ef 276 Pfam PF04333 MlaA lipoprotein 38 230 1.9E-78 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RR42_RS18955 2c79a04d2c2aa902eb806b7914f4a9ef 276 PANTHER PTHR30035 12 236 2.0E-74 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RR42_RS18955 2c79a04d2c2aa902eb806b7914f4a9ef 276 PRINTS PR01805 VacJ lipoprotein signature 39 52 2.5E-26 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RR42_RS18955 2c79a04d2c2aa902eb806b7914f4a9ef 276 PRINTS PR01805 VacJ lipoprotein signature 107 124 2.5E-26 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RR42_RS18955 2c79a04d2c2aa902eb806b7914f4a9ef 276 PRINTS PR01805 VacJ lipoprotein signature 56 72 2.5E-26 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RR42_RS18955 2c79a04d2c2aa902eb806b7914f4a9ef 276 PRINTS PR01805 VacJ lipoprotein signature 143 160 2.5E-26 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RR42_RS12190 e414560575fef59032771b01fbb46dc6 144 Gene3D G3DSA:3.40.50.620 1 144 1.0E-32 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RR42_RS12190 e414560575fef59032771b01fbb46dc6 144 PANTHER PTHR31964 1 144 7.4E-28 T 23-04-2016 RR42_RS12190 e414560575fef59032771b01fbb46dc6 144 SUPERFAMILY SSF52402 1 144 4.44E-32 T 23-04-2016 RR42_RS12190 e414560575fef59032771b01fbb46dc6 144 PRINTS PR01438 Universal stress protein signature 122 144 5.0E-16 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS12190 e414560575fef59032771b01fbb46dc6 144 PRINTS PR01438 Universal stress protein signature 2 20 5.0E-16 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS12190 e414560575fef59032771b01fbb46dc6 144 PRINTS PR01438 Universal stress protein signature 104 116 5.0E-16 T 23-04-2016 IPR006015 Universal stress protein A RR42_RS12190 e414560575fef59032771b01fbb46dc6 144 Pfam PF00582 Universal stress protein family 1 144 3.9E-28 T 23-04-2016 IPR006016 UspA GO:0006950 RR42_RS12190 e414560575fef59032771b01fbb46dc6 144 PANTHER PTHR31964:SF26 1 144 7.4E-28 T 23-04-2016 RR42_RS05135 b2b1a07d355cb8484b1a5c03f6af86d3 304 PANTHER PTHR12128:SF16 1 294 2.6E-77 T 23-04-2016 RR42_RS05135 b2b1a07d355cb8484b1a5c03f6af86d3 304 PIRSF PIRSF001365 1 299 1.9E-56 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS05135 b2b1a07d355cb8484b1a5c03f6af86d3 304 Gene3D G3DSA:3.20.20.70 2 295 3.5E-67 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS05135 b2b1a07d355cb8484b1a5c03f6af86d3 304 SMART SM01130 5 294 3.0E-71 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS05135 b2b1a07d355cb8484b1a5c03f6af86d3 304 PANTHER PTHR12128 1 294 2.6E-77 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS05135 b2b1a07d355cb8484b1a5c03f6af86d3 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 2.4E-7 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS05135 b2b1a07d355cb8484b1a5c03f6af86d3 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 2.4E-7 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS05135 b2b1a07d355cb8484b1a5c03f6af86d3 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 135 152 2.4E-7 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS05135 b2b1a07d355cb8484b1a5c03f6af86d3 304 Pfam PF00701 Dihydrodipicolinate synthetase family 6 290 6.7E-41 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RR42_RS05135 b2b1a07d355cb8484b1a5c03f6af86d3 304 SUPERFAMILY SSF51569 5 291 2.83E-66 T 23-04-2016 RR42_RS01550 09bed90368fe8e25dbbe9a9e8dac24a1 322 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 320 1.1E-72 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS01550 09bed90368fe8e25dbbe9a9e8dac24a1 322 PANTHER PTHR30349:SF1 3 290 2.6E-67 T 23-04-2016 RR42_RS01550 09bed90368fe8e25dbbe9a9e8dac24a1 322 SUPERFAMILY SSF53850 116 284 1.32E-9 T 23-04-2016 RR42_RS01550 09bed90368fe8e25dbbe9a9e8dac24a1 322 PIRSF PIRSF017082 2 322 8.0E-71 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS01550 09bed90368fe8e25dbbe9a9e8dac24a1 322 PANTHER PTHR30349 3 290 2.6E-67 T 23-04-2016 RR42_RS17180 47f6a6f676844494b511629184cd0618 99 Pfam PF12112 Protein of unknown function (DUF3579) 5 94 5.3E-39 T 23-04-2016 IPR021969 Protein of unknown function DUF3579 RR42_RS04090 4aff1cdedee3c25fd06517b4dd351c15 316 Pfam PF00482 Type II secretion system (T2SS), protein F 170 298 1.7E-19 T 23-04-2016 IPR018076 Type II secretion system F domain RR42_RS04090 4aff1cdedee3c25fd06517b4dd351c15 316 PANTHER PTHR35007:SF2 1 316 1.7E-61 T 23-04-2016 RR42_RS04090 4aff1cdedee3c25fd06517b4dd351c15 316 PANTHER PTHR35007 1 316 1.7E-61 T 23-04-2016 RR42_RS10860 d7be8780bdf6491729af2c3966ac071d 137 Pfam PF07681 DoxX 13 91 7.0E-16 T 23-04-2016 IPR032808 DoxX family RR42_RS10860 d7be8780bdf6491729af2c3966ac071d 137 PANTHER PTHR33452 8 129 3.9E-16 T 23-04-2016 RR42_RS02430 205c1856d2c0f75c676a00ca155dd85d 478 Pfam PF00474 Sodium:solute symporter family 30 426 4.3E-36 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RR42_RS02430 205c1856d2c0f75c676a00ca155dd85d 478 PANTHER PTHR11819:SF141 1 462 2.2E-96 T 23-04-2016 RR42_RS02430 205c1856d2c0f75c676a00ca155dd85d 478 PANTHER PTHR11819 1 462 2.2E-96 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RR42_RS14195 e62c67a5c49b4e18b624666bf38ed18a 480 Pfam PF16980 Putative citrate transport 36 478 1.2E-197 T 23-04-2016 IPR031566 Putative citrate transporter RR42_RS08205 422f54d37792658c49a4ec67eab5d546 121 Gene3D G3DSA:3.40.91.30 20 119 1.0E-25 T 23-04-2016 IPR011578 Restriction endonuclease, FokI, C-terminal/endonuclease I, core GO:0003677|GO:0004536 RR42_RS06315 3063671b1b8eb4683f744ead2c735ead 277 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 9 259 6.5E-51 T 23-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RR42_RS06315 3063671b1b8eb4683f744ead2c735ead 277 PIRSF PIRSF004808 6 269 1.5E-59 T 23-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RR42_RS06315 3063671b1b8eb4683f744ead2c735ead 277 Pfam PF00588 SpoU rRNA Methylase family 10 178 6.4E-30 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RR42_RS06315 3063671b1b8eb4683f744ead2c735ead 277 PANTHER PTHR12029 132 194 6.4E-27 T 23-04-2016 RR42_RS06315 3063671b1b8eb4683f744ead2c735ead 277 PANTHER PTHR12029 10 106 6.4E-27 T 23-04-2016 RR42_RS06315 3063671b1b8eb4683f744ead2c735ead 277 SUPERFAMILY SSF75217 9 187 2.42E-30 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases RR42_RS06315 3063671b1b8eb4683f744ead2c735ead 277 Gene3D G3DSA:3.40.1280.10 10 181 3.0E-26 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RR42_RS07535 2828e978b5a4753fa0b85e390ed234df 288 PANTHER PTHR11795 9 285 5.3E-92 T 23-04-2016 RR42_RS07535 2828e978b5a4753fa0b85e390ed234df 288 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 277 1.3E-41 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RR42_RS07535 2828e978b5a4753fa0b85e390ed234df 288 PANTHER PTHR11795:SF404 9 285 5.3E-92 T 23-04-2016 RR42_RS14940 54c787e43f0565d2257c19452e7b1f75 528 PANTHER PTHR34597:SF1 9 528 4.8E-108 T 23-04-2016 RR42_RS14940 54c787e43f0565d2257c19452e7b1f75 528 PANTHER PTHR34597 9 528 4.8E-108 T 23-04-2016 RR42_RS14940 54c787e43f0565d2257c19452e7b1f75 528 Pfam PF08479 POTRA domain, ShlB-type 36 109 1.9E-12 T 23-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type RR42_RS14940 54c787e43f0565d2257c19452e7b1f75 528 Gene3D G3DSA:3.10.20.310 31 109 2.9E-8 T 23-04-2016 RR42_RS14940 54c787e43f0565d2257c19452e7b1f75 528 Gene3D G3DSA:2.40.160.50 147 528 2.1E-56 T 23-04-2016 RR42_RS09475 08859590d68458e1960677e0f22e74db 262 Pfam PF01261 Xylose isomerase-like TIM barrel 37 214 3.6E-12 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RR42_RS09475 08859590d68458e1960677e0f22e74db 262 Gene3D G3DSA:3.20.20.150 13 257 2.1E-73 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RR42_RS09475 08859590d68458e1960677e0f22e74db 262 SUPERFAMILY SSF51658 12 257 9.81E-63 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RR42_RS33275 b54bc87ad5ff33213fcab8a93e761f2a 96 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 96 2.3E-14 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 RR42_RS33275 b54bc87ad5ff33213fcab8a93e761f2a 96 Gene3D G3DSA:3.90.800.10 1 96 2.0E-23 T 23-04-2016 RR42_RS33275 b54bc87ad5ff33213fcab8a93e761f2a 96 SUPERFAMILY SSF52374 1 95 2.09E-17 T 23-04-2016 RR42_RS19495 dae9472cbc223a610d52f0e8a17a9f17 223 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 2 23 3.5E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS19495 dae9472cbc223a610d52f0e8a17a9f17 223 Pfam PF13633 Prokaryotic N-terminal methylation site 2 26 6.8E-8 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS19495 dae9472cbc223a610d52f0e8a17a9f17 223 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 2 22 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS19495 dae9472cbc223a610d52f0e8a17a9f17 223 SUPERFAMILY SSF54523 4 135 8.24E-9 T 23-04-2016 RR42_RS04370 3f554b29d1de60fb3cf81ab25595091d 289 Gene3D G3DSA:2.30.30.320 24 89 1.7E-17 T 23-04-2016 IPR023387 DUF1653-like domain RR42_RS04370 3f554b29d1de60fb3cf81ab25595091d 289 SUPERFAMILY SSF109604 103 226 4.29E-9 T 23-04-2016 RR42_RS04370 3f554b29d1de60fb3cf81ab25595091d 289 Pfam PF07866 Protein of unknown function (DUF1653) 28 86 3.5E-13 T 23-04-2016 IPR023387 DUF1653-like domain RR42_RS04370 3f554b29d1de60fb3cf81ab25595091d 289 PANTHER PTHR21174 107 284 2.4E-12 T 23-04-2016 IPR009218 Predicted HD phosphohydrolase RR42_RS20565 89a2eecfaf55c4857d88538859c31146 1345 Pfam PF02514 CobN/Magnesium Chelatase 127 1197 2.1E-280 T 23-04-2016 IPR003672 CobN/magnesium chelatase GO:0009058 RR42_RS20565 89a2eecfaf55c4857d88538859c31146 1345 PANTHER PTHR23304 128 1206 3.4E-237 T 23-04-2016 RR42_RS20565 89a2eecfaf55c4857d88538859c31146 1345 PANTHER PTHR23304:SF113 128 1206 3.4E-237 T 23-04-2016 RR42_RS34450 6094b23d6dbac70f0aa453de978390b9 434 PANTHER PTHR10169:SF30 4 230 1.5E-168 T 23-04-2016 RR42_RS34450 6094b23d6dbac70f0aa453de978390b9 434 PANTHER PTHR10169:SF30 252 424 1.5E-168 T 23-04-2016 RR42_RS34450 6094b23d6dbac70f0aa453de978390b9 434 SUPERFAMILY SSF56719 2 433 1.96E-138 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RR42_RS34450 6094b23d6dbac70f0aa453de978390b9 434 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 2 433 4.3E-126 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS34450 6094b23d6dbac70f0aa453de978390b9 434 Gene3D G3DSA:3.30.1360.40 200 316 7.6E-21 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain RR42_RS34450 6094b23d6dbac70f0aa453de978390b9 434 Gene3D G3DSA:3.90.199.10 2 199 2.3E-106 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 RR42_RS34450 6094b23d6dbac70f0aa453de978390b9 434 Gene3D G3DSA:3.90.199.10 318 383 2.3E-106 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 RR42_RS34450 6094b23d6dbac70f0aa453de978390b9 434 SMART SM00434 2 434 9.6E-187 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RR42_RS34450 6094b23d6dbac70f0aa453de978390b9 434 PANTHER PTHR10169 252 424 1.5E-168 T 23-04-2016 RR42_RS34450 6094b23d6dbac70f0aa453de978390b9 434 PANTHER PTHR10169 4 230 1.5E-168 T 23-04-2016 RR42_RS07375 ce80c318453fd234b74745115cfc87f7 205 Gene3D G3DSA:3.60.20.10 2 169 1.1E-30 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RR42_RS07375 ce80c318453fd234b74745115cfc87f7 205 Pfam PF00227 Proteasome subunit 2 186 1.0E-6 T 23-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 RR42_RS07375 ce80c318453fd234b74745115cfc87f7 205 SUPERFAMILY SSF56235 1 186 2.72E-26 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RR42_RS10240 6ae38eba9ac71160955f254a4d8455fa 334 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 54 329 3.9E-46 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS10240 6ae38eba9ac71160955f254a4d8455fa 334 PIRSF PIRSF017082 2 333 1.1E-50 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS10240 6ae38eba9ac71160955f254a4d8455fa 334 SUPERFAMILY SSF53850 102 294 1.72E-9 T 23-04-2016 RR42_RS10240 6ae38eba9ac71160955f254a4d8455fa 334 PANTHER PTHR30349:SF1 10 292 4.4E-44 T 23-04-2016 RR42_RS10240 6ae38eba9ac71160955f254a4d8455fa 334 PANTHER PTHR30349 10 292 4.4E-44 T 23-04-2016 RR42_RS08005 9490d292be2fe2900539c0a575136c22 183 Pfam PF07799 Protein of unknown function (DUF1643) 24 161 8.3E-37 T 23-04-2016 IPR012441 Protein of unknown function DUF1643 RR42_RS01950 a9d7299673f3dd7d63dce44b3c4f524f 285 Gene3D G3DSA:1.10.3720.10 86 281 5.3E-26 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS01950 a9d7299673f3dd7d63dce44b3c4f524f 285 PANTHER PTHR30151:SF7 12 285 1.6E-92 T 23-04-2016 RR42_RS01950 a9d7299673f3dd7d63dce44b3c4f524f 285 SUPERFAMILY SSF161098 88 272 2.09E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS01950 a9d7299673f3dd7d63dce44b3c4f524f 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 270 1.1E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS01950 a9d7299673f3dd7d63dce44b3c4f524f 285 PANTHER PTHR30151 12 285 1.6E-92 T 23-04-2016 RR42_RS01950 a9d7299673f3dd7d63dce44b3c4f524f 285 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 78 272 2.0E-73 T 23-04-2016 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 RR42_RS05460 b6b6808f74f5722c75b3c30cbe5ca860 167 Gene3D G3DSA:3.10.350.10 114 165 5.5E-11 T 23-04-2016 IPR018392 LysM domain RR42_RS05460 b6b6808f74f5722c75b3c30cbe5ca860 167 PANTHER PTHR34700 100 167 1.3E-20 T 23-04-2016 RR42_RS05460 b6b6808f74f5722c75b3c30cbe5ca860 167 Pfam PF01476 LysM domain 116 164 1.5E-11 T 23-04-2016 IPR018392 LysM domain RR42_RS05460 b6b6808f74f5722c75b3c30cbe5ca860 167 Pfam PF04972 BON domain 55 107 1.3E-8 T 23-04-2016 IPR007055 BON domain RR42_RS05460 b6b6808f74f5722c75b3c30cbe5ca860 167 SUPERFAMILY SSF54106 114 164 1.31E-7 T 23-04-2016 IPR018392 LysM domain RR42_RS05460 b6b6808f74f5722c75b3c30cbe5ca860 167 SMART SM00257 115 164 1.7E-11 T 23-04-2016 IPR018392 LysM domain RR42_RS15310 692daa19c18af0c0031b3244a72a04fe 752 PANTHER PTHR30441 4 708 6.7E-99 T 23-04-2016 RR42_RS15310 692daa19c18af0c0031b3244a72a04fe 752 Pfam PF05170 AsmA family 1 582 1.2E-109 T 23-04-2016 IPR007844 AsmA RR42_RS15310 692daa19c18af0c0031b3244a72a04fe 752 PANTHER PTHR30441:SF2 4 708 6.7E-99 T 23-04-2016 RR42_RS17595 811ae5ce138a7da9e88533d766abf9b2 196 Gene3D G3DSA:1.10.10.690 70 194 9.1E-25 T 23-04-2016 IPR027405 YidB-like RR42_RS17595 811ae5ce138a7da9e88533d766abf9b2 196 Pfam PF06078 Bacterial protein of unknown function (DUF937) 66 189 5.6E-13 T 23-04-2016 IPR009282 Protein of unknown function DUF937 RR42_RS17595 811ae5ce138a7da9e88533d766abf9b2 196 SUPERFAMILY SSF140804 90 194 5.89E-23 T 23-04-2016 IPR027405 YidB-like RR42_RS17755 efc00ae95d4d78fbbac2ea6e87085a13 410 Gene3D G3DSA:2.30.40.10 365 408 7.1E-26 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS17755 efc00ae95d4d78fbbac2ea6e87085a13 410 Gene3D G3DSA:2.30.40.10 1 59 7.1E-26 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS17755 efc00ae95d4d78fbbac2ea6e87085a13 410 Gene3D G3DSA:3.20.20.140 60 363 3.1E-96 T 23-04-2016 RR42_RS17755 efc00ae95d4d78fbbac2ea6e87085a13 410 PANTHER PTHR11271 10 405 2.9E-130 T 23-04-2016 RR42_RS17755 efc00ae95d4d78fbbac2ea6e87085a13 410 SUPERFAMILY SSF51338 4 57 8.64E-18 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS17755 efc00ae95d4d78fbbac2ea6e87085a13 410 SUPERFAMILY SSF51338 348 407 1.15E-12 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RR42_RS17755 efc00ae95d4d78fbbac2ea6e87085a13 410 PANTHER PTHR11271:SF33 10 405 2.9E-130 T 23-04-2016 RR42_RS17755 efc00ae95d4d78fbbac2ea6e87085a13 410 SUPERFAMILY SSF51556 58 362 1.94E-88 T 23-04-2016 IPR032466 Metal-dependent hydrolase RR42_RS17755 efc00ae95d4d78fbbac2ea6e87085a13 410 Pfam PF01979 Amidohydrolase family 54 393 4.9E-41 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RR42_RS20275 7a084af4beb6a9e1dc713f88c54e5140 402 SUPERFAMILY SSF53822 30 400 2.77E-95 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RR42_RS20275 7a084af4beb6a9e1dc713f88c54e5140 402 PANTHER PTHR30483:SF17 1 402 2.1E-192 T 23-04-2016 RR42_RS20275 7a084af4beb6a9e1dc713f88c54e5140 402 PANTHER PTHR30483 1 402 2.1E-192 T 23-04-2016 RR42_RS20275 7a084af4beb6a9e1dc713f88c54e5140 402 Pfam PF13458 Periplasmic binding protein 30 365 6.4E-93 T 23-04-2016 IPR028081 Leucine-binding protein domain RR42_RS20275 7a084af4beb6a9e1dc713f88c54e5140 402 Gene3D G3DSA:3.40.50.2300 159 304 6.1E-20 T 23-04-2016 RR42_RS20275 7a084af4beb6a9e1dc713f88c54e5140 402 Gene3D G3DSA:3.40.50.2300 27 154 4.0E-34 T 23-04-2016 RR42_RS20275 7a084af4beb6a9e1dc713f88c54e5140 402 Gene3D G3DSA:3.40.50.2300 305 350 4.0E-34 T 23-04-2016 RR42_RS17655 059510d66bd97291f0b6c3799e12d742 718 PANTHER PTHR23355:SF5 240 652 1.4E-35 T 23-04-2016 RR42_RS17655 059510d66bd97291f0b6c3799e12d742 718 SMART SM00955 235 522 1.1E-65 T 23-04-2016 RR42_RS17655 059510d66bd97291f0b6c3799e12d742 718 Pfam PF00773 RNB domain 477 519 3.9E-10 T 23-04-2016 RR42_RS17655 059510d66bd97291f0b6c3799e12d742 718 Pfam PF00773 RNB domain 241 474 1.1E-33 T 23-04-2016 RR42_RS17655 059510d66bd97291f0b6c3799e12d742 718 SUPERFAMILY SSF50249 227 571 6.28E-72 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS17655 059510d66bd97291f0b6c3799e12d742 718 PANTHER PTHR23355 240 652 1.4E-35 T 23-04-2016 RR42_RS06170 bde707943f2b2d9ef874d6a79d3e377e 96 Gene3D G3DSA:3.30.70.900 1 95 1.6E-34 T 23-04-2016 RR42_RS06170 bde707943f2b2d9ef874d6a79d3e377e 96 SUPERFAMILY SSF54909 1 95 1.81E-29 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RR42_RS06170 bde707943f2b2d9ef874d6a79d3e377e 96 PANTHER PTHR41521 1 95 4.4E-18 T 23-04-2016 RR42_RS06170 bde707943f2b2d9ef874d6a79d3e377e 96 Pfam PF07045 Domain of unknown function (DUF1330) 3 95 5.7E-36 T 23-04-2016 IPR010753 Domain of unknown function DUF1330 RR42_RS09860 cee7b7e8bb8530a14182db652b094621 681 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 56 679 1.7E-117 T 23-04-2016 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:0022891|GO:0042710 RR42_RS09860 cee7b7e8bb8530a14182db652b094621 681 Gene3D G3DSA:1.25.40.10 160 365 2.6E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS09860 cee7b7e8bb8530a14182db652b094621 681 SUPERFAMILY SSF48452 270 378 7.3E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS03000 eff67909ae0fcc5afb2210f1bd5d8e5b 335 PANTHER PTHR30349:SF32 15 294 4.3E-87 T 23-04-2016 RR42_RS03000 eff67909ae0fcc5afb2210f1bd5d8e5b 335 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 61 331 4.2E-83 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS03000 eff67909ae0fcc5afb2210f1bd5d8e5b 335 SUPERFAMILY SSF53850 122 299 1.41E-14 T 23-04-2016 RR42_RS03000 eff67909ae0fcc5afb2210f1bd5d8e5b 335 PIRSF PIRSF017082 5 334 2.2E-80 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS03000 eff67909ae0fcc5afb2210f1bd5d8e5b 335 PANTHER PTHR30349 15 294 4.3E-87 T 23-04-2016 RR42_RS31280 13c1e462d9973860fa1bc7b8e8bfb88c 75 Gene3D G3DSA:1.10.260.40 2 51 5.8E-7 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS31280 13c1e462d9973860fa1bc7b8e8bfb88c 75 SUPERFAMILY SSF47413 4 49 1.19E-7 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS14255 f18de5f22691836777e7d68b303f8650 257 Pfam PF06629 MltA-interacting protein MipA 29 257 3.3E-40 T 23-04-2016 IPR010583 MltA-interacting MipA RR42_RS14255 f18de5f22691836777e7d68b303f8650 257 SUPERFAMILY SSF103515 66 224 1.96E-5 T 23-04-2016 IPR005546 Autotransporter beta-domain RR42_RS11125 b4c5037d3d1c7c759487f7973d7de96f 457 PANTHER PTHR37957 5 456 2.8E-146 T 23-04-2016 RR42_RS11125 b4c5037d3d1c7c759487f7973d7de96f 457 Pfam PF13449 Esterase-like activity of phytase 96 428 1.1E-68 T 23-04-2016 IPR027372 Phytase-like domain RR42_RS20315 542f672cd4ba05f6e4e98d8adfd6d41c 242 PANTHER PTHR36920:SF1 1 242 9.9E-37 T 23-04-2016 RR42_RS20315 542f672cd4ba05f6e4e98d8adfd6d41c 242 SUPERFAMILY SSF56925 36 242 2.59E-24 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RR42_RS20315 542f672cd4ba05f6e4e98d8adfd6d41c 242 Gene3D G3DSA:2.40.160.20 22 242 4.8E-68 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RR42_RS20315 542f672cd4ba05f6e4e98d8adfd6d41c 242 Pfam PF03922 OmpW family 26 242 5.9E-36 T 23-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 RR42_RS20315 542f672cd4ba05f6e4e98d8adfd6d41c 242 PANTHER PTHR36920 1 242 9.9E-37 T 23-04-2016 RR42_RS19420 111e25da6b36add084a67ece1501f5fe 712 PANTHER PTHR30509 322 543 1.7E-13 T 23-04-2016 RR42_RS19420 111e25da6b36add084a67ece1501f5fe 712 Pfam PF13515 Fusaric acid resistance protein-like 386 510 4.1E-17 T 23-04-2016 RR42_RS01800 21e98d22eeddf2141ff3aa57a666c2a6 159 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 1.1E-73 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RR42_RS01800 21e98d22eeddf2141ff3aa57a666c2a6 159 SUPERFAMILY SSF47240 1 155 5.63E-55 T 23-04-2016 IPR009078 Ferritin-like superfamily RR42_RS01800 21e98d22eeddf2141ff3aa57a666c2a6 159 PANTHER PTHR30295 1 158 2.4E-49 T 23-04-2016 RR42_RS01800 21e98d22eeddf2141ff3aa57a666c2a6 159 Gene3D G3DSA:1.20.1260.10 1 155 1.8E-65 T 23-04-2016 IPR012347 Ferritin-related RR42_RS01800 21e98d22eeddf2141ff3aa57a666c2a6 159 Pfam PF00210 Ferritin-like domain 8 143 8.8E-40 T 23-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 RR42_RS01800 21e98d22eeddf2141ff3aa57a666c2a6 159 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RR42_RS01800 21e98d22eeddf2141ff3aa57a666c2a6 159 PANTHER PTHR30295:SF9 1 158 2.4E-49 T 23-04-2016 RR42_RS01800 21e98d22eeddf2141ff3aa57a666c2a6 159 PRINTS PR00601 Bacterioferritin signature 128 149 5.2E-67 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RR42_RS01800 21e98d22eeddf2141ff3aa57a666c2a6 159 PRINTS PR00601 Bacterioferritin signature 23 43 5.2E-67 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RR42_RS01800 21e98d22eeddf2141ff3aa57a666c2a6 159 PRINTS PR00601 Bacterioferritin signature 107 127 5.2E-67 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RR42_RS01800 21e98d22eeddf2141ff3aa57a666c2a6 159 PRINTS PR00601 Bacterioferritin signature 86 106 5.2E-67 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RR42_RS01800 21e98d22eeddf2141ff3aa57a666c2a6 159 PRINTS PR00601 Bacterioferritin signature 44 64 5.2E-67 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RR42_RS01800 21e98d22eeddf2141ff3aa57a666c2a6 159 PRINTS PR00601 Bacterioferritin signature 3 22 5.2E-67 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RR42_RS01800 21e98d22eeddf2141ff3aa57a666c2a6 159 PRINTS PR00601 Bacterioferritin signature 65 85 5.2E-67 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RR42_RS01800 21e98d22eeddf2141ff3aa57a666c2a6 159 PIRSF PIRSF002560 1 157 1.4E-72 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RR42_RS15100 9ab8a38c59d83552aa2182085d885159 292 Gene3D G3DSA:3.90.550.10 5 276 1.4E-70 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RR42_RS15100 9ab8a38c59d83552aa2182085d885159 292 PANTHER PTHR22572 7 290 5.2E-103 T 23-04-2016 RR42_RS15100 9ab8a38c59d83552aa2182085d885159 292 PANTHER PTHR22572:SF14 7 290 5.2E-103 T 23-04-2016 RR42_RS15100 9ab8a38c59d83552aa2182085d885159 292 Pfam PF00483 Nucleotidyl transferase 12 266 4.6E-27 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 RR42_RS15100 9ab8a38c59d83552aa2182085d885159 292 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 266 2.2E-116 T 23-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 RR42_RS15100 9ab8a38c59d83552aa2182085d885159 292 SUPERFAMILY SSF53448 4 270 5.63E-65 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RR42_RS12950 fb5838a2900b3a9f928788d3b5192844 248 PANTHER PTHR23344:SF20 5 243 6.3E-63 T 23-04-2016 RR42_RS12950 fb5838a2900b3a9f928788d3b5192844 248 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 14 241 8.5E-39 T 23-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 RR42_RS12950 fb5838a2900b3a9f928788d3b5192844 248 SUPERFAMILY SSF51695 7 243 1.94E-63 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RR42_RS12950 fb5838a2900b3a9f928788d3b5192844 248 PANTHER PTHR23344 5 243 6.3E-63 T 23-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 RR42_RS12950 fb5838a2900b3a9f928788d3b5192844 248 Gene3D G3DSA:3.20.20.190 5 243 3.0E-63 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RR42_RS11795 7dbf543a788d561b7e373d762f6ab439 271 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 1 269 75.401 T 23-04-2016 IPR026530 Phosphoenolpyruvate synthase regulatory protein RR42_RS11795 7dbf543a788d561b7e373d762f6ab439 271 PANTHER PTHR31756:SF3 1 268 5.9E-94 T 23-04-2016 RR42_RS11795 7dbf543a788d561b7e373d762f6ab439 271 PANTHER PTHR31756 1 268 5.9E-94 T 23-04-2016 RR42_RS11795 7dbf543a788d561b7e373d762f6ab439 271 Pfam PF03618 Kinase/pyrophosphorylase 4 260 4.0E-81 T 23-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 RR42_RS15175 6d4462118b4a547e0c5314d2251b9eed 153 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 10 145 8.4E-21 T 23-04-2016 IPR009936 Protein of unknown function DUF1468 RR42_RS15910 79ce6197cc458f48d26e002df33d0896 211 SUPERFAMILY SSF47240 65 209 4.17E-36 T 23-04-2016 IPR009078 Ferritin-like superfamily RR42_RS15910 79ce6197cc458f48d26e002df33d0896 211 Gene3D G3DSA:1.20.1260.10 65 207 2.9E-17 T 23-04-2016 IPR012347 Ferritin-related RR42_RS15910 79ce6197cc458f48d26e002df33d0896 211 Pfam PF13668 Ferritin-like domain 68 201 1.8E-34 T 23-04-2016 RR42_RS19055 9816e39f5c93de2e166ad12b0fcd3aec 226 Pfam PF01794 Ferric reductase like transmembrane component 67 181 1.9E-14 T 23-04-2016 IPR013130 Ferric reductase transmembrane component-like domain RR42_RS19055 9816e39f5c93de2e166ad12b0fcd3aec 226 Hamap MF_01207 Sulfoxide reductase heme-binding subunit YedZ [yedZ]. 20 223 24.6 T 23-04-2016 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 RR42_RS19055 9816e39f5c93de2e166ad12b0fcd3aec 226 PANTHER PTHR36964 18 217 4.1E-46 T 23-04-2016 RR42_RS03085 30c8761344e7aeb8d170bd653ec589ef 155 PANTHER PTHR33602 9 155 5.5E-14 T 23-04-2016 RR42_RS03085 30c8761344e7aeb8d170bd653ec589ef 155 Pfam PF02631 RecX family 33 145 5.1E-19 T 23-04-2016 IPR003783 Regulatory protein RecX GO:0006282 RR42_RS03085 30c8761344e7aeb8d170bd653ec589ef 155 Hamap MF_01114 Regulatory protein RecX [recX]. 4 151 11.545 T 23-04-2016 IPR003783 Regulatory protein RecX GO:0006282 RR42_RS03085 30c8761344e7aeb8d170bd653ec589ef 155 Gene3D G3DSA:1.10.10.10 102 148 1.8E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS03085 30c8761344e7aeb8d170bd653ec589ef 155 Gene3D G3DSA:1.10.10.10 8 54 1.5E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS13685 cfef3104f8953ac40821f3358dfa0d6f 178 SUPERFAMILY SSF51182 14 174 4.09E-23 T 23-04-2016 IPR011051 RmlC-like cupin domain RR42_RS13685 cfef3104f8953ac40821f3358dfa0d6f 178 Pfam PF07883 Cupin domain 84 153 4.9E-12 T 23-04-2016 IPR013096 Cupin 2, conserved barrel RR42_RS13685 cfef3104f8953ac40821f3358dfa0d6f 178 Gene3D G3DSA:2.60.120.10 38 164 5.2E-16 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS15300 15764f08420584f8b5d370c7f28a937e 192 Gene3D G3DSA:3.40.50.300 1 190 9.6E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS15300 15764f08420584f8b5d370c7f28a937e 192 SUPERFAMILY SSF52540 2 167 9.55E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS15300 15764f08420584f8b5d370c7f28a937e 192 Pfam PF13671 AAA domain 4 161 5.9E-23 T 23-04-2016 RR42_RS08545 884393bcc2b3585dcf1df3ba5f173aa4 893 Pfam PF10145 Phage-related minor tail protein 249 475 1.2E-22 T 23-04-2016 IPR010090 Phage tail tape measure protein RR42_RS08545 884393bcc2b3585dcf1df3ba5f173aa4 893 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 202 583 2.1E-60 T 23-04-2016 IPR010090 Phage tail tape measure protein RR42_RS37595 26fc9d2a65a15207f465cab15b6361b0 584 Pfam PF13476 AAA domain 5 60 3.5E-11 T 23-04-2016 RR42_RS37595 26fc9d2a65a15207f465cab15b6361b0 584 Gene3D G3DSA:3.40.1140.10 1 105 1.4E-10 T 23-04-2016 RR42_RS37595 26fc9d2a65a15207f465cab15b6361b0 584 Gene3D G3DSA:3.40.1140.10 493 522 1.4E-10 T 23-04-2016 RR42_RS37595 26fc9d2a65a15207f465cab15b6361b0 584 SUPERFAMILY SSF52540 207 297 3.82E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS37595 26fc9d2a65a15207f465cab15b6361b0 584 SUPERFAMILY SSF52540 1 142 3.82E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS08345 2d5b96ff7f410307272188815bf8ae57 374 Pfam PF04865 Baseplate J-like protein 68 333 5.8E-35 T 23-04-2016 IPR006949 Baseplate protein J-like RR42_RS02970 f927ec7550a6bf62dcf97fb9f522028a 136 TIGRFAM TIGR00807 malonate_madL: malonate transporter, MadL subunit 1 121 3.3E-52 T 23-04-2016 IPR004690 Malonate transporter MadL subunit GO:0016020 RR42_RS02970 f927ec7550a6bf62dcf97fb9f522028a 136 Pfam PF03817 Malonate transporter MadL subunit 1 116 6.3E-49 T 23-04-2016 IPR004690 Malonate transporter MadL subunit GO:0016020 RR42_RS01220 72f7067c6d5235bd383d129965c78a63 258 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 252 1.7E-76 T 23-04-2016 RR42_RS01220 72f7067c6d5235bd383d129965c78a63 258 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 2 254 2.4E-79 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RR42_RS01220 72f7067c6d5235bd383d129965c78a63 258 Gene3D G3DSA:3.60.10.10 1 255 3.0E-94 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RR42_RS01220 72f7067c6d5235bd383d129965c78a63 258 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 247 1.2E-23 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RR42_RS01220 72f7067c6d5235bd383d129965c78a63 258 PANTHER PTHR22748 1 258 8.9E-106 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RR42_RS01220 72f7067c6d5235bd383d129965c78a63 258 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 29 38 - T 23-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 RR42_RS01220 72f7067c6d5235bd383d129965c78a63 258 SUPERFAMILY SSF56219 2 255 6.81E-76 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RR42_RS17280 4a0cc38ada22cc3f19d1bdd1bd4f899f 181 Gene3D G3DSA:1.20.1200.10 17 180 1.3E-65 T 23-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 RR42_RS17280 4a0cc38ada22cc3f19d1bdd1bd4f899f 181 Pfam PF01923 Cobalamin adenosyltransferase 8 165 2.0E-56 T 23-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 RR42_RS17280 4a0cc38ada22cc3f19d1bdd1bd4f899f 181 PANTHER PTHR12213 4 179 2.2E-68 T 23-04-2016 RR42_RS17280 4a0cc38ada22cc3f19d1bdd1bd4f899f 181 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 24 179 4.0E-75 T 23-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RR42_RS17280 4a0cc38ada22cc3f19d1bdd1bd4f899f 181 SUPERFAMILY SSF89028 7 178 1.39E-60 T 23-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 RR42_RS17280 4a0cc38ada22cc3f19d1bdd1bd4f899f 181 PANTHER PTHR12213:SF0 4 179 2.2E-68 T 23-04-2016 RR42_RS17280 4a0cc38ada22cc3f19d1bdd1bd4f899f 181 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 10 178 2.4E-62 T 23-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RR42_RS16395 61a030b2425a6fcf8be30463d646f432 290 PANTHER PTHR18966 32 259 2.1E-24 T 23-04-2016 RR42_RS16395 61a030b2425a6fcf8be30463d646f432 290 SMART SM00062 38 258 7.8E-35 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RR42_RS16395 61a030b2425a6fcf8be30463d646f432 290 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 256 1.6E-45 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RR42_RS16395 61a030b2425a6fcf8be30463d646f432 290 Gene3D G3DSA:3.40.190.10 116 209 3.1E-19 T 23-04-2016 RR42_RS16395 61a030b2425a6fcf8be30463d646f432 290 Gene3D G3DSA:3.40.190.10 217 257 3.1E-25 T 23-04-2016 RR42_RS16395 61a030b2425a6fcf8be30463d646f432 290 Gene3D G3DSA:3.40.190.10 36 115 3.1E-25 T 23-04-2016 RR42_RS16395 61a030b2425a6fcf8be30463d646f432 290 SUPERFAMILY SSF53850 11 256 1.36E-49 T 23-04-2016 RR42_RS13055 81ef823cb211fe497913b4113e28f298 248 SUPERFAMILY SSF52467 6 243 7.89E-79 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RR42_RS13055 81ef823cb211fe497913b4113e28f298 248 Pfam PF02146 Sir2 family 24 195 9.3E-45 T 23-04-2016 IPR003000 Sirtuin family GO:0070403 RR42_RS13055 81ef823cb211fe497913b4113e28f298 248 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 17 245 56.456 T 23-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 RR42_RS13055 81ef823cb211fe497913b4113e28f298 248 Gene3D G3DSA:3.40.50.1220 85 123 3.1E-43 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RR42_RS13055 81ef823cb211fe497913b4113e28f298 248 Gene3D G3DSA:3.40.50.1220 6 34 3.1E-43 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RR42_RS13055 81ef823cb211fe497913b4113e28f298 248 Gene3D G3DSA:3.40.50.1220 171 242 3.1E-43 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RR42_RS13055 81ef823cb211fe497913b4113e28f298 248 PANTHER PTHR11085 10 239 1.2E-82 T 23-04-2016 IPR003000 Sirtuin family GO:0070403 RR42_RS13055 81ef823cb211fe497913b4113e28f298 248 Gene3D G3DSA:3.30.1600.10 35 73 2.2E-21 T 23-04-2016 IPR026591 Sirtuin family, catalytic core small domain RR42_RS13055 81ef823cb211fe497913b4113e28f298 248 Gene3D G3DSA:3.30.1600.10 124 165 2.2E-21 T 23-04-2016 IPR026591 Sirtuin family, catalytic core small domain RR42_RS16860 c6873b48332d252c556cdd53c90bf27b 124 PANTHER PTHR30093 1 53 3.3E-13 T 23-04-2016 RR42_RS16860 c6873b48332d252c556cdd53c90bf27b 124 Gene3D G3DSA:3.30.700.10 1 112 4.4E-12 T 23-04-2016 RR42_RS16860 c6873b48332d252c556cdd53c90bf27b 124 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 16 106 7.3E-21 T 23-04-2016 IPR031982 Type IV minor pilin ComP RR42_RS16860 c6873b48332d252c556cdd53c90bf27b 124 SUPERFAMILY SSF54523 1 113 5.13E-18 T 23-04-2016 RR42_RS16860 c6873b48332d252c556cdd53c90bf27b 124 PANTHER PTHR30093:SF4 1 53 3.3E-13 T 23-04-2016 RR42_RS09450 f4d8ea6f8a57b249475fbf2145dceac3 160 Gene3D G3DSA:3.40.630.30 2 155 1.0E-31 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS09450 f4d8ea6f8a57b249475fbf2145dceac3 160 Pfam PF13673 Acetyltransferase (GNAT) domain 30 145 8.4E-15 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RR42_RS09450 f4d8ea6f8a57b249475fbf2145dceac3 160 SUPERFAMILY SSF55729 2 154 4.12E-26 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS21470 4f485499f822ee03af2307bfa2d978ee 105 Gene3D G3DSA:3.90.260.10 1 70 5.1E-13 T 23-04-2016 IPR002931 Transglutaminase-like RR42_RS21470 4f485499f822ee03af2307bfa2d978ee 105 SUPERFAMILY SSF54001 1 103 3.92E-31 T 23-04-2016 RR42_RS21470 4f485499f822ee03af2307bfa2d978ee 105 SMART SM00460 1 65 1.6E-14 T 23-04-2016 IPR002931 Transglutaminase-like RR42_RS21470 4f485499f822ee03af2307bfa2d978ee 105 PANTHER PTHR33490 1 104 1.2E-42 T 23-04-2016 RR42_RS21470 4f485499f822ee03af2307bfa2d978ee 105 PANTHER PTHR33490:SF6 1 104 1.2E-42 T 23-04-2016 RR42_RS21470 4f485499f822ee03af2307bfa2d978ee 105 Pfam PF01841 Transglutaminase-like superfamily 1 63 1.0E-15 T 23-04-2016 IPR002931 Transglutaminase-like RR42_RS13725 67bb645854f2e4709378641c35347591 408 Gene3D G3DSA:1.20.1250.20 223 394 1.2E-8 T 23-04-2016 RR42_RS13725 67bb645854f2e4709378641c35347591 408 Gene3D G3DSA:1.20.1250.20 24 201 4.5E-13 T 23-04-2016 RR42_RS13725 67bb645854f2e4709378641c35347591 408 PANTHER PTHR23537:SF1 25 406 3.3E-59 T 23-04-2016 RR42_RS13725 67bb645854f2e4709378641c35347591 408 SUPERFAMILY SSF103473 22 398 3.4E-34 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS13725 67bb645854f2e4709378641c35347591 408 PANTHER PTHR23537 25 406 3.3E-59 T 23-04-2016 RR42_RS13725 67bb645854f2e4709378641c35347591 408 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 32 394 1.2E-76 T 23-04-2016 IPR010645 Uncharacterised MFS-type transporter YbfB RR42_RS00170 45cb0c8c007a305a8f85599789950a0a 181 Hamap MF_00299 Probable RNA 2'-phosphotransferase [kptA]. 5 179 32.659 T 23-04-2016 IPR022928 RNA 2'-phosphotransferase KptA, putative GO:0016773 RR42_RS00170 45cb0c8c007a305a8f85599789950a0a 181 Pfam PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family 7 172 4.2E-39 T 23-04-2016 IPR002745 Phosphotransferase KptA/Tpt1 GO:0006388|GO:0016772 RR42_RS00170 45cb0c8c007a305a8f85599789950a0a 181 PANTHER PTHR12684 1 181 5.0E-53 T 23-04-2016 RR42_RS00170 45cb0c8c007a305a8f85599789950a0a 181 PANTHER PTHR12684:SF2 1 181 5.0E-53 T 23-04-2016 RR42_RS00170 45cb0c8c007a305a8f85599789950a0a 181 SUPERFAMILY SSF56399 9 179 1.06E-54 T 23-04-2016 RR42_RS00570 96010b88f6563e1f99e46ccbed8863aa 170 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 12 155 1.7E-26 T 23-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 RR42_RS00570 96010b88f6563e1f99e46ccbed8863aa 170 PANTHER PTHR37484 5 165 4.0E-21 T 23-04-2016 RR42_RS00570 96010b88f6563e1f99e46ccbed8863aa 170 PIRSF PIRSF018472 4 163 5.3E-43 T 23-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type RR42_RS00570 96010b88f6563e1f99e46ccbed8863aa 170 Pfam PF04093 rod shape-determining protein MreD 14 149 2.3E-15 T 23-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 RR42_RS14120 116548d195ce42aa2e1a3cc551f0a37e 59 SUPERFAMILY SSF57829 2 55 1.1E-17 T 23-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 RR42_RS14120 116548d195ce42aa2e1a3cc551f0a37e 59 Pfam PF01783 Ribosomal L32p protein family 2 55 4.1E-20 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 RR42_RS14120 116548d195ce42aa2e1a3cc551f0a37e 59 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 1.6E-20 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 RR42_RS14120 116548d195ce42aa2e1a3cc551f0a37e 59 PANTHER PTHR35534 1 59 4.0E-26 T 23-04-2016 RR42_RS14120 116548d195ce42aa2e1a3cc551f0a37e 59 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.258 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 RR42_RS16000 679dbe61b304d55acef2342cd4889443 154 Pfam PF11748 Protein of unknown function (DUF3306) 5 119 3.9E-35 T 23-04-2016 IPR021735 Protein of unknown function DUF3306 RR42_RS37245 fe440d315cc75c99d71caafbe280e676 81 Pfam PF00773 RNB domain 3 75 6.3E-15 T 23-04-2016 RR42_RS37245 fe440d315cc75c99d71caafbe280e676 81 SUPERFAMILY SSF50249 1 77 7.42E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RR42_RS06835 136d1d2c96bfe964b33b7afb7c3f89a9 312 Pfam PF04381 Putative exonuclease, RdgC 1 294 2.4E-110 T 23-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 RR42_RS06835 136d1d2c96bfe964b33b7afb7c3f89a9 312 PANTHER PTHR38103:SF1 2 299 3.4E-72 T 23-04-2016 RR42_RS06835 136d1d2c96bfe964b33b7afb7c3f89a9 312 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 296 34.781 T 23-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 RR42_RS06835 136d1d2c96bfe964b33b7afb7c3f89a9 312 PANTHER PTHR38103 2 299 3.4E-72 T 23-04-2016 RR42_RS19405 eead28cf4dcac6bbf37d96f0fc82eb81 131 Pfam PF04343 Protein of unknown function, DUF488 14 122 8.0E-13 T 23-04-2016 IPR007438 Protein of unknown function DUF488 RR42_RS10700 4a44f4ded32cf1415f1340f43fc2442d 348 SUPERFAMILY SSF102198 155 347 5.49E-14 T 23-04-2016 RR42_RS10700 4a44f4ded32cf1415f1340f43fc2442d 348 Gene3D G3DSA:3.50.30.50 175 348 1.0E-23 T 23-04-2016 RR42_RS10700 4a44f4ded32cf1415f1340f43fc2442d 348 Gene3D G3DSA:3.50.30.50 88 127 1.0E-23 T 23-04-2016 RR42_RS10700 4a44f4ded32cf1415f1340f43fc2442d 348 Pfam PF04199 Putative cyclase 90 276 4.6E-14 T 23-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 RR42_RS10700 4a44f4ded32cf1415f1340f43fc2442d 348 PANTHER PTHR34861 2 348 5.4E-62 T 23-04-2016 RR42_RS15515 01134f22ed03a6fa94c8263f445631a4 1605 Pfam PF05567 Neisseria PilC beta-propeller domain 1088 1439 1.7E-72 T 23-04-2016 IPR008707 PilC beta-propeller domain RR42_RS06320 1ccae5d9dfa3d21293ef336f847c2fbd 191 PANTHER PTHR30349:SF21 1 168 4.9E-56 T 23-04-2016 RR42_RS06320 1ccae5d9dfa3d21293ef336f847c2fbd 191 SUPERFAMILY SSF54506 2 168 9.42E-54 T 23-04-2016 RR42_RS06320 1ccae5d9dfa3d21293ef336f847c2fbd 191 Gene3D G3DSA:3.10.310.10 2 170 5.9E-58 T 23-04-2016 RR42_RS06320 1ccae5d9dfa3d21293ef336f847c2fbd 191 Pfam PF04303 PrpF protein 2 169 2.3E-57 T 23-04-2016 IPR007400 PrpF protein RR42_RS06320 1ccae5d9dfa3d21293ef336f847c2fbd 191 PANTHER PTHR30349 1 168 4.9E-56 T 23-04-2016 RR42_RS20400 403fea55fe7b1dea05fa4f264678ec3b 254 Gene3D G3DSA:3.40.225.10 10 222 8.0E-60 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal RR42_RS20400 403fea55fe7b1dea05fa4f264678ec3b 254 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 16 201 1.3E-43 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal RR42_RS20400 403fea55fe7b1dea05fa4f264678ec3b 254 PANTHER PTHR10672 9 243 2.7E-82 T 23-04-2016 RR42_RS20400 403fea55fe7b1dea05fa4f264678ec3b 254 SMART SM01007 15 201 5.0E-58 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal RR42_RS20400 403fea55fe7b1dea05fa4f264678ec3b 254 SUPERFAMILY SSF53639 8 220 2.35E-58 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal RR42_RS18875 fbae7f1f7b0f3a8ba98c026ca4c30459 126 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 9 106 21.57 T 23-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 RR42_RS18875 fbae7f1f7b0f3a8ba98c026ca4c30459 126 PANTHER PTHR21256 3 121 2.9E-35 T 23-04-2016 RR42_RS18875 fbae7f1f7b0f3a8ba98c026ca4c30459 126 SUPERFAMILY SSF101386 10 110 7.41E-21 T 23-04-2016 RR42_RS18875 fbae7f1f7b0f3a8ba98c026ca4c30459 126 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 15 109 4.9E-13 T 23-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 RR42_RS18875 fbae7f1f7b0f3a8ba98c026ca4c30459 126 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 12 106 3.8E-27 T 23-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 RR42_RS00960 9a0293c9e5c4464a106e4227878440bc 177 SUPERFAMILY SSF55826 24 171 6.67E-31 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RR42_RS00960 9a0293c9e5c4464a106e4227878440bc 177 PANTHER PTHR30411:SF1 47 174 4.8E-22 T 23-04-2016 RR42_RS00960 9a0293c9e5c4464a106e4227878440bc 177 Gene3D G3DSA:3.90.960.10 21 173 2.3E-40 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RR42_RS00960 9a0293c9e5c4464a106e4227878440bc 177 PANTHER PTHR30411 47 174 4.8E-22 T 23-04-2016 RR42_RS00960 9a0293c9e5c4464a106e4227878440bc 177 Pfam PF04073 Aminoacyl-tRNA editing domain 46 162 3.6E-25 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RR42_RS06110 a79bd2ecefefc733ed537f3ba2e95546 293 Gene3D G3DSA:3.20.20.140 1 260 1.2E-66 T 23-04-2016 RR42_RS06110 a79bd2ecefefc733ed537f3ba2e95546 293 Pfam PF01026 TatD related DNase 3 261 7.2E-58 T 23-04-2016 IPR001130 TatD family GO:0016788 RR42_RS06110 a79bd2ecefefc733ed537f3ba2e95546 293 SUPERFAMILY SSF51556 2 260 4.94E-68 T 23-04-2016 IPR032466 Metal-dependent hydrolase RR42_RS06110 a79bd2ecefefc733ed537f3ba2e95546 293 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 RR42_RS06110 a79bd2ecefefc733ed537f3ba2e95546 293 PIRSF PIRSF005902 1 264 1.2E-58 T 23-04-2016 IPR001130 TatD family GO:0016788 RR42_RS06110 a79bd2ecefefc733ed537f3ba2e95546 293 PANTHER PTHR10060 1 266 1.7E-64 T 23-04-2016 IPR001130 TatD family GO:0016788 RR42_RS37575 29d108bfee93d920139cd7ef087a4a7e 216 SUPERFAMILY SSF111369 186 216 4.58E-5 T 23-04-2016 RR42_RS37575 29d108bfee93d920139cd7ef087a4a7e 216 SUPERFAMILY SSF56954 65 167 2.09E-19 T 23-04-2016 RR42_RS37575 29d108bfee93d920139cd7ef087a4a7e 216 SUPERFAMILY SSF56954 10 34 2.09E-19 T 23-04-2016 RR42_RS37575 29d108bfee93d920139cd7ef087a4a7e 216 Gene3D G3DSA:1.20.1600.10 101 167 1.9E-9 T 23-04-2016 RR42_RS37575 29d108bfee93d920139cd7ef087a4a7e 216 Gene3D G3DSA:1.20.1600.10 63 100 3.7E-6 T 23-04-2016 RR42_RS37575 29d108bfee93d920139cd7ef087a4a7e 216 PANTHER PTHR30203:SF7 97 166 5.4E-12 T 23-04-2016 RR42_RS37575 29d108bfee93d920139cd7ef087a4a7e 216 PANTHER PTHR30203 97 166 5.4E-12 T 23-04-2016 RR42_RS02630 cd49739461a13dc6f19ae499f6270ab1 130 Gene3D G3DSA:3.30.230.10 6 130 2.4E-50 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RR42_RS02630 cd49739461a13dc6f19ae499f6270ab1 130 PANTHER PTHR21569 7 130 1.1E-61 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 RR42_RS02630 cd49739461a13dc6f19ae499f6270ab1 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.5E-46 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 RR42_RS02630 cd49739461a13dc6f19ae499f6270ab1 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 31.214 T 23-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid RR42_RS02630 cd49739461a13dc6f19ae499f6270ab1 130 SUPERFAMILY SSF54211 5 130 8.34E-45 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RR42_RS02630 cd49739461a13dc6f19ae499f6270ab1 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 23-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 RR42_RS03570 85343531ab7aa4583f2476305facfbe5 157 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 3 148 7.2E-40 T 23-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN RR42_RS03570 85343531ab7aa4583f2476305facfbe5 157 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 5 146 1.9E-38 T 23-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN RR42_RS03570 85343531ab7aa4583f2476305facfbe5 157 PANTHER PTHR37625 1 147 1.2E-37 T 23-04-2016 RR42_RS03570 85343531ab7aa4583f2476305facfbe5 157 PANTHER PTHR37625:SF2 1 147 1.2E-37 T 23-04-2016 RR42_RS16160 27f653e6192a88d879649129370026e4 270 PANTHER PTHR30269 1 265 1.6E-70 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RR42_RS16160 27f653e6192a88d879649129370026e4 270 Pfam PF01925 Sulfite exporter TauE/SafE 9 262 1.8E-55 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RR42_RS16160 27f653e6192a88d879649129370026e4 270 PANTHER PTHR30269:SF18 1 265 1.6E-70 T 23-04-2016 RR42_RS02530 75daad067530686818b0a635f01ba918 140 SUPERFAMILY SSF54637 18 133 2.03E-33 T 23-04-2016 IPR029069 HotDog domain RR42_RS02530 75daad067530686818b0a635f01ba918 140 Gene3D G3DSA:3.10.129.10 17 133 7.3E-35 T 23-04-2016 IPR029069 HotDog domain RR42_RS02530 75daad067530686818b0a635f01ba918 140 PANTHER PTHR11049:SF5 17 135 1.8E-43 T 23-04-2016 RR42_RS02530 75daad067530686818b0a635f01ba918 140 PANTHER PTHR11049 17 135 1.8E-43 T 23-04-2016 RR42_RS02530 75daad067530686818b0a635f01ba918 140 Pfam PF03061 Thioesterase superfamily 30 102 8.5E-15 T 23-04-2016 IPR006683 Thioesterase domain RR42_RS01410 668d51e0a857e599ed30ca14da828afd 341 PANTHER PTHR12126 2 40 7.3E-53 T 23-04-2016 RR42_RS01410 668d51e0a857e599ed30ca14da828afd 341 PANTHER PTHR12126 56 299 7.3E-53 T 23-04-2016 RR42_RS01410 668d51e0a857e599ed30ca14da828afd 341 PANTHER PTHR12126:SF1 2 40 7.3E-53 T 23-04-2016 RR42_RS01410 668d51e0a857e599ed30ca14da828afd 341 PANTHER PTHR12126:SF1 56 299 7.3E-53 T 23-04-2016 RR42_RS01410 668d51e0a857e599ed30ca14da828afd 341 SUPERFAMILY SSF51735 1 281 6.78E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS01410 668d51e0a857e599ed30ca14da828afd 341 Pfam PF13460 NAD(P)H-binding 50 178 7.2E-17 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS01410 668d51e0a857e599ed30ca14da828afd 341 Gene3D G3DSA:3.40.50.720 2 253 1.1E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain RR42_RS15675 2e1b85925484880c48be9bbaaed3d5b3 278 Pfam PF14302 Domain of unknown function (DUF4377) 200 273 1.4E-23 T 23-04-2016 IPR025485 Domain of unknown function DUF4377 RR42_RS15675 2e1b85925484880c48be9bbaaed3d5b3 278 Pfam PF03724 META domain 53 173 1.4E-18 T 23-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ RR42_RS00650 5fac773a33be954dfe76b9d5e00d4e09 246 PANTHER PTHR30292:SF0 1 246 2.1E-122 T 23-04-2016 RR42_RS00650 5fac773a33be954dfe76b9d5e00d4e09 246 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 240 43.889 T 23-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF RR42_RS00650 5fac773a33be954dfe76b9d5e00d4e09 246 SUPERFAMILY SSF88713 1 243 1.7E-94 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RR42_RS00650 5fac773a33be954dfe76b9d5e00d4e09 246 PANTHER PTHR30292 1 246 2.1E-122 T 23-04-2016 RR42_RS00650 5fac773a33be954dfe76b9d5e00d4e09 246 Pfam PF03746 LamB/YcsF family 3 235 5.7E-95 T 23-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF RR42_RS05105 df1c6249cc58541338a3d4bfe5dc5d21 277 PANTHER PTHR30143 1 274 7.3E-79 T 23-04-2016 RR42_RS05105 df1c6249cc58541338a3d4bfe5dc5d21 277 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 86 268 2.4E-10 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RR42_RS05105 df1c6249cc58541338a3d4bfe5dc5d21 277 SUPERFAMILY SSF56529 14 268 1.26E-73 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RR42_RS05105 df1c6249cc58541338a3d4bfe5dc5d21 277 Gene3D G3DSA:3.90.850.10 13 269 2.7E-82 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RR42_RS05685 df7be499e88f7d1330a9e687ec9861dd 230 Hamap MF_01385 Urease accessory protein UreF [ureF]. 6 230 31.624 T 23-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 RR42_RS05685 df7be499e88f7d1330a9e687ec9861dd 230 PIRSF PIRSF009467 3 230 4.8E-68 T 23-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 RR42_RS05685 df7be499e88f7d1330a9e687ec9861dd 230 PANTHER PTHR33620 4 230 3.7E-36 T 23-04-2016 RR42_RS05685 df7be499e88f7d1330a9e687ec9861dd 230 Pfam PF01730 UreF 38 185 6.7E-44 T 23-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 RR42_RS15705 0dab4304f8dad3e06d2b3107da39681b 374 Pfam PF13439 Glycosyltransferase Family 4 13 167 2.0E-22 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RR42_RS15705 0dab4304f8dad3e06d2b3107da39681b 374 Pfam PF00534 Glycosyl transferases group 1 179 328 4.8E-31 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 RR42_RS15705 0dab4304f8dad3e06d2b3107da39681b 374 PANTHER PTHR12526 1 365 3.7E-69 T 23-04-2016 RR42_RS15705 0dab4304f8dad3e06d2b3107da39681b 374 Gene3D G3DSA:3.40.50.2000 152 335 4.8E-27 T 23-04-2016 RR42_RS15705 0dab4304f8dad3e06d2b3107da39681b 374 SUPERFAMILY SSF53756 2 361 8.85E-84 T 23-04-2016 RR42_RS09215 c2e737b607ff3b29a060029c3bbedbe1 212 Gene3D G3DSA:3.40.30.10 53 197 1.7E-20 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS09215 c2e737b607ff3b29a060029c3bbedbe1 212 SUPERFAMILY SSF52833 53 197 2.37E-15 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS09215 c2e737b607ff3b29a060029c3bbedbe1 212 Pfam PF02630 SCO1/SenC 77 147 1.4E-6 T 23-04-2016 IPR003782 Copper chaperone SCO1/SenC RR42_RS05500 98f8c2cd1f7aea8c4db06e4e55f16a4f 122 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 6 76 2.5E-25 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RR42_RS05500 98f8c2cd1f7aea8c4db06e4e55f16a4f 122 PANTHER PTHR34182 6 115 2.6E-23 T 23-04-2016 RR42_RS05500 98f8c2cd1f7aea8c4db06e4e55f16a4f 122 PRINTS PR01651 Protein-export SecG membrane protein signature 57 79 2.0E-34 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RR42_RS05500 98f8c2cd1f7aea8c4db06e4e55f16a4f 122 PRINTS PR01651 Protein-export SecG membrane protein signature 41 57 2.0E-34 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RR42_RS05500 98f8c2cd1f7aea8c4db06e4e55f16a4f 122 PRINTS PR01651 Protein-export SecG membrane protein signature 26 40 2.0E-34 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RR42_RS05500 98f8c2cd1f7aea8c4db06e4e55f16a4f 122 PRINTS PR01651 Protein-export SecG membrane protein signature 6 26 2.0E-34 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RR42_RS05500 98f8c2cd1f7aea8c4db06e4e55f16a4f 122 Pfam PF03840 Preprotein translocase SecG subunit 7 76 2.2E-20 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RR42_RS10105 544f6df167dd9043fb3520b2641eba90 275 PANTHER PTHR24220 4 247 5.6E-78 T 23-04-2016 RR42_RS10105 544f6df167dd9043fb3520b2641eba90 275 Gene3D G3DSA:3.40.50.300 4 236 9.0E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS10105 544f6df167dd9043fb3520b2641eba90 275 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS10105 544f6df167dd9043fb3520b2641eba90 275 SMART SM00382 28 224 2.2E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS10105 544f6df167dd9043fb3520b2641eba90 275 SUPERFAMILY SSF52540 5 235 1.12E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS10105 544f6df167dd9043fb3520b2641eba90 275 PANTHER PTHR24220:SF408 4 247 5.6E-78 T 23-04-2016 RR42_RS10105 544f6df167dd9043fb3520b2641eba90 275 Pfam PF00005 ABC transporter 19 174 1.3E-23 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS00195 be2c1820e183d3e5f2b264a613bd6f6c 309 PANTHER PTHR11795:SF371 1 309 5.7E-72 T 23-04-2016 RR42_RS00195 be2c1820e183d3e5f2b264a613bd6f6c 309 PANTHER PTHR11795 1 309 5.7E-72 T 23-04-2016 RR42_RS00195 be2c1820e183d3e5f2b264a613bd6f6c 309 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 293 8.1E-44 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RR42_RS20665 62621f15005c590823c96831b825a44a 243 Gene3D G3DSA:3.60.15.10 8 229 9.6E-38 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS20665 62621f15005c590823c96831b825a44a 243 PANTHER PTHR32145 10 239 5.0E-14 T 23-04-2016 RR42_RS20665 62621f15005c590823c96831b825a44a 243 SUPERFAMILY SSF56281 12 239 3.78E-29 T 23-04-2016 IPR001279 Metallo-beta-lactamase RR42_RS16585 20f8da259b9fbc04411a98e21e7344e2 267 Pfam PF04199 Putative cyclase 39 195 5.6E-28 T 23-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 RR42_RS16585 20f8da259b9fbc04411a98e21e7344e2 267 SUPERFAMILY SSF102198 70 264 1.7E-38 T 23-04-2016 RR42_RS16585 20f8da259b9fbc04411a98e21e7344e2 267 PANTHER PTHR31118 71 262 3.9E-19 T 23-04-2016 RR42_RS16585 20f8da259b9fbc04411a98e21e7344e2 267 Gene3D G3DSA:3.50.30.50 2 266 1.3E-43 T 23-04-2016 RR42_RS05370 a094de4b22586b1f22e55aabc75211db 891 Pfam PF02687 FtsX-like permease family 318 424 1.9E-8 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RR42_RS05370 a094de4b22586b1f22e55aabc75211db 891 Pfam PF02687 FtsX-like permease family 770 882 1.1E-12 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RR42_RS05370 a094de4b22586b1f22e55aabc75211db 891 PANTHER PTHR30287 37 134 1.1E-119 T 23-04-2016 RR42_RS05370 a094de4b22586b1f22e55aabc75211db 891 PANTHER PTHR30287 151 891 1.1E-119 T 23-04-2016 RR42_RS03875 1a6599ef83e7963a5d4a739eddcff09f 182 PANTHER PTHR15364:SF1 4 181 8.2E-55 T 23-04-2016 RR42_RS03875 1a6599ef83e7963a5d4a739eddcff09f 182 Gene3D G3DSA:3.40.50.1810 1 152 2.5E-23 T 23-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 RR42_RS03875 1a6599ef83e7963a5d4a739eddcff09f 182 SUPERFAMILY SSF52309 1 164 2.81E-44 T 23-04-2016 RR42_RS03875 1a6599ef83e7963a5d4a739eddcff09f 182 PANTHER PTHR15364 4 181 8.2E-55 T 23-04-2016 RR42_RS03875 1a6599ef83e7963a5d4a739eddcff09f 182 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 4 145 4.7E-43 T 23-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 RR42_RS15535 07397fd5eed698e6495967b2afaf5628 209 Pfam PF13681 Type IV pilus assembly protein PilX C-term 104 209 4.0E-12 T 23-04-2016 IPR025205 PilX/PilW C-terminal domain RR42_RS11615 2a83b6a0c593cebb49a86052b3b14ba3 424 Pfam PF13620 Carboxypeptidase regulatory-like domain 26 87 2.0E-10 T 23-04-2016 RR42_RS11615 2a83b6a0c593cebb49a86052b3b14ba3 424 Pfam PF13200 Putative glycosyl hydrolase domain 105 417 3.9E-104 T 23-04-2016 IPR025275 Putative glycosyl hydrolase domain DUF4015 RR42_RS11615 2a83b6a0c593cebb49a86052b3b14ba3 424 Gene3D G3DSA:2.60.40.1120 26 83 7.5E-9 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain RR42_RS11615 2a83b6a0c593cebb49a86052b3b14ba3 424 SUPERFAMILY SSF49464 26 100 3.27E-10 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain RR42_RS11615 2a83b6a0c593cebb49a86052b3b14ba3 424 SUPERFAMILY SSF51445 171 307 3.54E-10 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily RR42_RS11615 2a83b6a0c593cebb49a86052b3b14ba3 424 Gene3D G3DSA:3.20.20.80 242 411 7.5E-4 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RR42_RS05580 9afdec53b8ab655db0571dc38e5c02e0 102 PIRSF PIRSF019883 1 102 2.1E-42 T 23-04-2016 IPR016768 Uncharacterised conserved protein UCP019883, membrane RR42_RS05580 9afdec53b8ab655db0571dc38e5c02e0 102 Pfam PF10993 Protein of unknown function (DUF2818) 7 98 1.4E-36 T 23-04-2016 IPR016768 Uncharacterised conserved protein UCP019883, membrane RR42_RS10005 585ad0f05192228026bc23543381ffd3 216 Pfam PF01144 Coenzyme A transferase 7 216 5.9E-66 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RR42_RS10005 585ad0f05192228026bc23543381ffd3 216 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 216 4.0E-111 T 23-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 RR42_RS10005 585ad0f05192228026bc23543381ffd3 216 SUPERFAMILY SSF100950 2 216 5.02E-75 T 23-04-2016 RR42_RS10005 585ad0f05192228026bc23543381ffd3 216 Gene3D G3DSA:3.40.1080.10 4 216 3.6E-85 T 23-04-2016 RR42_RS10005 585ad0f05192228026bc23543381ffd3 216 PANTHER PTHR13707 1 216 2.0E-92 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RR42_RS10005 585ad0f05192228026bc23543381ffd3 216 SMART SM00882 6 216 2.7E-70 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RR42_RS10005 585ad0f05192228026bc23543381ffd3 216 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 23-04-2016 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 RR42_RS10645 cdbaf7b3b496cea3b5899eb18c40373e 115 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 4 98 6.5E-8 T 23-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein RR42_RS10645 cdbaf7b3b496cea3b5899eb18c40373e 115 Gene3D G3DSA:3.40.1230.10 1 115 5.3E-22 T 23-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein RR42_RS10645 cdbaf7b3b496cea3b5899eb18c40373e 115 SUPERFAMILY SSF64076 2 115 1.57E-13 T 23-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein RR42_RS18665 163845e123061b56d35ecfedb42467b4 794 SUPERFAMILY SSF52540 530 639 1.7E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18665 163845e123061b56d35ecfedb42467b4 794 SUPERFAMILY SSF52540 345 375 1.7E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18665 163845e123061b56d35ecfedb42467b4 794 Gene3D G3DSA:3.40.50.300 525 636 1.1E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18665 163845e123061b56d35ecfedb42467b4 794 Gene3D G3DSA:3.40.50.300 345 375 1.1E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS18665 163845e123061b56d35ecfedb42467b4 794 PANTHER PTHR37291 284 788 6.6E-60 T 23-04-2016 RR42_RS18665 163845e123061b56d35ecfedb42467b4 794 Pfam PF07728 AAA domain (dynein-related subfamily) 501 631 1.2E-8 T 23-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 RR42_RS18665 163845e123061b56d35ecfedb42467b4 794 PANTHER PTHR37291:SF1 284 788 6.6E-60 T 23-04-2016 RR42_RS09345 32a8f122feade40bed6a485c0d8f67e3 147 Gene3D G3DSA:3.10.450.50 15 141 5.5E-30 T 23-04-2016 IPR032710 NTF2-like domain RR42_RS09345 32a8f122feade40bed6a485c0d8f67e3 147 SUPERFAMILY SSF54427 23 139 7.76E-22 T 23-04-2016 IPR032710 NTF2-like domain RR42_RS09345 32a8f122feade40bed6a485c0d8f67e3 147 Pfam PF12680 SnoaL-like domain 29 126 1.1E-9 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain RR42_RS15935 b4ce00af5a471be1ff2aad6386ca41a8 582 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 307 3.7E-56 T 23-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RR42_RS15935 b4ce00af5a471be1ff2aad6386ca41a8 582 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 328 512 2.0E-36 T 23-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RR42_RS15935 b4ce00af5a471be1ff2aad6386ca41a8 582 PANTHER PTHR33362 447 520 1.2E-229 T 23-04-2016 RR42_RS15935 b4ce00af5a471be1ff2aad6386ca41a8 582 PANTHER PTHR33362 5 288 1.2E-229 T 23-04-2016 RR42_RS15935 b4ce00af5a471be1ff2aad6386ca41a8 582 PANTHER PTHR33362 328 429 1.2E-229 T 23-04-2016 RR42_RS15935 b4ce00af5a471be1ff2aad6386ca41a8 582 PANTHER PTHR33362:SF7 447 520 1.2E-229 T 23-04-2016 RR42_RS15935 b4ce00af5a471be1ff2aad6386ca41a8 582 PANTHER PTHR33362:SF7 5 288 1.2E-229 T 23-04-2016 RR42_RS15935 b4ce00af5a471be1ff2aad6386ca41a8 582 PANTHER PTHR33362:SF7 328 429 1.2E-229 T 23-04-2016 RR42_RS16665 f853d97fdddad483b093ecb354ef1cc1 255 Gene3D G3DSA:3.40.30.10 55 173 1.0E-4 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS16665 f853d97fdddad483b093ecb354ef1cc1 255 SUPERFAMILY SSF52833 41 151 2.03E-8 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS16665 f853d97fdddad483b093ecb354ef1cc1 255 Pfam PF05988 Bacterial protein of unknown function (DUF899) 2 252 4.6E-95 T 23-04-2016 IPR010296 Protein of unknown function DUF899, thioredoxin-like RR42_RS05020 e26a08bff8f314aa1a175686f2b3cf87 295 Gene3D G3DSA:3.40.50.150 65 189 2.3E-6 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS05020 e26a08bff8f314aa1a175686f2b3cf87 295 PANTHER PTHR13369 38 264 3.0E-24 T 23-04-2016 RR42_RS05020 e26a08bff8f314aa1a175686f2b3cf87 295 Pfam PF13679 Methyltransferase domain 48 188 1.9E-44 T 23-04-2016 IPR025714 Methyltransferase domain RR42_RS05020 e26a08bff8f314aa1a175686f2b3cf87 295 SUPERFAMILY SSF53335 53 186 5.17E-14 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS09700 9138e3f3db58f5f5db5235c5e7209c13 183 Gene3D G3DSA:2.60.40.1090 27 182 7.7E-29 T 23-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RR42_RS09700 9138e3f3db58f5f5db5235c5e7209c13 183 SUPERFAMILY SSF49401 29 182 1.24E-25 T 23-04-2016 IPR008966 Adhesion domain RR42_RS09700 9138e3f3db58f5f5db5235c5e7209c13 183 Pfam PF16970 Type-1 fimbrial protein, A 53 183 3.9E-22 T 23-04-2016 RR42_RS09700 9138e3f3db58f5f5db5235c5e7209c13 183 PANTHER PTHR33420 1 183 3.1E-38 T 23-04-2016 RR42_RS20885 c522bc38c0dc8f8432f0c769db56a102 103 Pfam PF12102 Domain of unknown function (DUF3578) 60 102 5.5E-7 T 23-04-2016 IPR021961 Protein of unknown function DUF3578 RR42_RS09425 9d81b1fe68080511a175bfc2e1dfa686 473 PANTHER PTHR10543 8 473 2.5E-141 T 23-04-2016 IPR004294 Carotenoid oxygenase GO:0016702|GO:0055114 RR42_RS09425 9d81b1fe68080511a175bfc2e1dfa686 473 Pfam PF03055 Retinal pigment epithelial membrane protein 16 470 1.3E-110 T 23-04-2016 IPR004294 Carotenoid oxygenase GO:0016702|GO:0055114 RR42_RS09425 9d81b1fe68080511a175bfc2e1dfa686 473 PANTHER PTHR10543:SF37 8 473 2.5E-141 T 23-04-2016 RR42_RS13755 b7351f7b12b71d9b470293bdd01aab26 200 PANTHER PTHR30055:SF62 8 186 6.5E-24 T 23-04-2016 RR42_RS13755 b7351f7b12b71d9b470293bdd01aab26 200 PANTHER PTHR30055 8 186 6.5E-24 T 23-04-2016 RR42_RS13755 b7351f7b12b71d9b470293bdd01aab26 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 3.0E-13 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS13755 b7351f7b12b71d9b470293bdd01aab26 200 SUPERFAMILY SSF48498 80 183 4.08E-17 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RR42_RS13755 b7351f7b12b71d9b470293bdd01aab26 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 4.8E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS13755 b7351f7b12b71d9b470293bdd01aab26 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 4.8E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS13755 b7351f7b12b71d9b470293bdd01aab26 200 SUPERFAMILY SSF46689 5 73 2.64E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS13755 b7351f7b12b71d9b470293bdd01aab26 200 Gene3D G3DSA:1.10.357.10 6 183 5.6E-35 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS05710 aadda89130118fd6b77147cf26a3ba35 230 Gene3D G3DSA:3.40.30.10 1 82 1.7E-27 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS05710 aadda89130118fd6b77147cf26a3ba35 230 SUPERFAMILY SSF47616 77 204 7.5E-38 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS05710 aadda89130118fd6b77147cf26a3ba35 230 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 79 6.8E-14 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RR42_RS05710 aadda89130118fd6b77147cf26a3ba35 230 Pfam PF00043 Glutathione S-transferase, C-terminal domain 109 196 1.4E-14 T 23-04-2016 IPR004046 Glutathione S-transferase, C-terminal RR42_RS05710 aadda89130118fd6b77147cf26a3ba35 230 SUPERFAMILY SSF52833 1 84 1.17E-21 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS05710 aadda89130118fd6b77147cf26a3ba35 230 Gene3D G3DSA:1.20.1050.10 83 200 2.3E-52 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RR42_RS05710 aadda89130118fd6b77147cf26a3ba35 230 PANTHER PTHR11260 2 202 4.6E-79 T 23-04-2016 RR42_RS05710 aadda89130118fd6b77147cf26a3ba35 230 PANTHER PTHR11260:SF178 2 202 4.6E-79 T 23-04-2016 RR42_RS13020 d94ad9e77ff7bbcef01ece809e5a0245 293 Gene3D G3DSA:3.20.20.370 47 270 7.6E-39 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RR42_RS13020 d94ad9e77ff7bbcef01ece809e5a0245 293 SUPERFAMILY SSF88713 43 271 1.14E-37 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RR42_RS13020 d94ad9e77ff7bbcef01ece809e5a0245 293 Pfam PF01522 Polysaccharide deacetylase 50 195 3.5E-19 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RR42_RS06405 b6fa6d5c9309bc473b0509b8af0dfee0 120 PANTHER PTHR38598 26 114 4.3E-26 T 23-04-2016 RR42_RS06405 b6fa6d5c9309bc473b0509b8af0dfee0 120 Pfam PF04341 Protein of unknown function, DUF485 28 115 5.2E-30 T 23-04-2016 IPR007436 Protein of unknown function DUF485 RR42_RS37725 4a54048ebbdf43c93b678c9cf12a8093 133 SMART SM00421 59 116 3.6E-17 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS37725 4a54048ebbdf43c93b678c9cf12a8093 133 PANTHER PTHR26402 56 117 1.7E-12 T 23-04-2016 RR42_RS37725 4a54048ebbdf43c93b678c9cf12a8093 133 Gene3D G3DSA:1.10.10.10 61 117 3.9E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS37725 4a54048ebbdf43c93b678c9cf12a8093 133 SUPERFAMILY SSF46894 56 116 1.94E-16 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RR42_RS37725 4a54048ebbdf43c93b678c9cf12a8093 133 Pfam PF00196 Bacterial regulatory proteins, luxR family 61 114 2.8E-16 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS37725 4a54048ebbdf43c93b678c9cf12a8093 133 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 62 76 3.2E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS37725 4a54048ebbdf43c93b678c9cf12a8093 133 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 76 92 3.2E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS37725 4a54048ebbdf43c93b678c9cf12a8093 133 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 92 104 3.2E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RR42_RS07630 e8fdeda31c2be1fa1a163241ebc608fe 190 Gene3D G3DSA:3.40.50.150 7 190 4.9E-18 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS07630 e8fdeda31c2be1fa1a163241ebc608fe 190 SUPERFAMILY SSF53335 10 190 1.78E-21 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS07630 e8fdeda31c2be1fa1a163241ebc608fe 190 Pfam PF13649 Methyltransferase domain 34 126 8.1E-10 T 23-04-2016 RR42_RS18770 03d1e57e528ec6f98c8def88cd7f03a1 1005 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 161 305 1.6E-10 T 23-04-2016 IPR000477 Reverse transcriptase domain RR42_RS18770 03d1e57e528ec6f98c8def88cd7f03a1 1005 SUPERFAMILY SSF56317 747 973 3.14E-9 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RR42_RS17445 32ac8962b4de1c3657d0b382b825168d 190 SMART SM00867 27 187 1.0E-43 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RR42_RS17445 32ac8962b4de1c3657d0b382b825168d 190 PANTHER PTHR34406 1 185 1.2E-28 T 23-04-2016 RR42_RS17445 32ac8962b4de1c3657d0b382b825168d 190 Gene3D G3DSA:2.40.128.110 29 186 2.8E-42 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RR42_RS17445 32ac8962b4de1c3657d0b382b825168d 190 PANTHER PTHR34406:SF1 1 185 1.2E-28 T 23-04-2016 RR42_RS17445 32ac8962b4de1c3657d0b382b825168d 190 Pfam PF04264 YceI-like domain 29 185 9.4E-34 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RR42_RS17445 32ac8962b4de1c3657d0b382b825168d 190 SUPERFAMILY SSF101874 29 187 1.2E-40 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RR42_RS12310 86b8705e4d65f1c2bffe70a293261b69 223 PANTHER PTHR10681 31 155 2.5E-41 T 23-04-2016 RR42_RS12310 86b8705e4d65f1c2bffe70a293261b69 223 PANTHER PTHR10681 180 217 2.5E-41 T 23-04-2016 RR42_RS12310 86b8705e4d65f1c2bffe70a293261b69 223 SUPERFAMILY SSF52833 47 218 2.15E-35 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS12310 86b8705e4d65f1c2bffe70a293261b69 223 PANTHER PTHR10681:SF70 31 155 2.5E-41 T 23-04-2016 RR42_RS12310 86b8705e4d65f1c2bffe70a293261b69 223 PANTHER PTHR10681:SF70 180 217 2.5E-41 T 23-04-2016 RR42_RS12310 86b8705e4d65f1c2bffe70a293261b69 223 Gene3D G3DSA:3.40.30.10 44 218 1.3E-35 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS12310 86b8705e4d65f1c2bffe70a293261b69 223 Pfam PF00578 AhpC/TSA family 51 196 8.5E-30 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 RR42_RS06775 1352d81e22abf540648138089999fb4c 181 SMART SM00471 28 137 6.0E-4 T 23-04-2016 IPR003607 HD/PDEase domain RR42_RS06775 1352d81e22abf540648138089999fb4c 181 Pfam PF13328 HD domain 10 134 6.9E-18 T 23-04-2016 IPR003607 HD/PDEase domain RR42_RS06775 1352d81e22abf540648138089999fb4c 181 SUPERFAMILY SSF109604 6 153 3.93E-31 T 23-04-2016 RR42_RS06775 1352d81e22abf540648138089999fb4c 181 PANTHER PTHR21262 7 131 2.6E-21 T 23-04-2016 RR42_RS03515 0fb2f707b4d2228827e5ba5a3d61a9be 177 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 12 162 6.4E-59 T 23-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 RR42_RS03515 0fb2f707b4d2228827e5ba5a3d61a9be 177 PANTHER PTHR35850 2 176 1.3E-104 T 23-04-2016 RR42_RS03515 0fb2f707b4d2228827e5ba5a3d61a9be 177 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 162 1.2E-57 T 23-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 RR42_RS03515 0fb2f707b4d2228827e5ba5a3d61a9be 177 PANTHER PTHR35850:SF1 2 176 1.3E-104 T 23-04-2016 RR42_RS03515 0fb2f707b4d2228827e5ba5a3d61a9be 177 PIRSF PIRSF028301 3 175 6.3E-62 T 23-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 RR42_RS03695 9e108e1a19a8681bec28d6e0679efdb1 500 PANTHER PTHR35342:SF2 2 500 6.5E-293 T 23-04-2016 RR42_RS03695 9e108e1a19a8681bec28d6e0679efdb1 500 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 22 438 1.4E-154 T 23-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane RR42_RS03695 9e108e1a19a8681bec28d6e0679efdb1 500 PANTHER PTHR35342 2 500 6.5E-293 T 23-04-2016 RR42_RS04120 07a5a28c2c410ba5a4d70a9e3f16fc12 426 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 16 62 7.6E-14 T 23-04-2016 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal RR42_RS16715 092deb028796aa9ca4328c790da1f143 122 Pfam PF07363 Protein of unknown function (DUF1484) 19 122 2.9E-21 T 23-04-2016 IPR009957 Protein of unknown function DUF1484 RR42_RS03850 70f393b2876a7d66d80235c3690101a5 271 SUPERFAMILY SSF81901 105 244 4.01E-26 T 23-04-2016 RR42_RS03850 70f393b2876a7d66d80235c3690101a5 271 Pfam PF08238 Sel1 repeat 121 156 1.5 T 23-04-2016 IPR006597 Sel1-like repeat RR42_RS03850 70f393b2876a7d66d80235c3690101a5 271 Pfam PF08238 Sel1 repeat 159 191 5.6E-6 T 23-04-2016 IPR006597 Sel1-like repeat RR42_RS03850 70f393b2876a7d66d80235c3690101a5 271 Pfam PF08238 Sel1 repeat 234 250 100.0 T 23-04-2016 IPR006597 Sel1-like repeat RR42_RS03850 70f393b2876a7d66d80235c3690101a5 271 Pfam PF08238 Sel1 repeat 193 227 1.8E-8 T 23-04-2016 IPR006597 Sel1-like repeat RR42_RS03850 70f393b2876a7d66d80235c3690101a5 271 PANTHER PTHR11102 69 250 7.1E-32 T 23-04-2016 RR42_RS03850 70f393b2876a7d66d80235c3690101a5 271 SMART SM00671 120 156 5.6 T 23-04-2016 IPR006597 Sel1-like repeat RR42_RS03850 70f393b2876a7d66d80235c3690101a5 271 SMART SM00671 193 228 2.2E-8 T 23-04-2016 IPR006597 Sel1-like repeat RR42_RS03850 70f393b2876a7d66d80235c3690101a5 271 SMART SM00671 85 119 170.0 T 23-04-2016 IPR006597 Sel1-like repeat RR42_RS03850 70f393b2876a7d66d80235c3690101a5 271 SMART SM00671 157 192 2.6E-5 T 23-04-2016 IPR006597 Sel1-like repeat RR42_RS03850 70f393b2876a7d66d80235c3690101a5 271 Gene3D G3DSA:1.25.40.10 70 188 3.7E-20 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS03850 70f393b2876a7d66d80235c3690101a5 271 Gene3D G3DSA:1.25.40.10 189 250 2.1E-18 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS18805 8c3b04dd99af326b75795ee4837979f4 165 Gene3D G3DSA:2.30.30.220 2 105 3.7E-47 T 23-04-2016 IPR007481 Stringent starvation protein B RR42_RS18805 8c3b04dd99af326b75795ee4837979f4 165 PIRSF PIRSF005276 1 165 2.4E-51 T 23-04-2016 IPR007481 Stringent starvation protein B RR42_RS18805 8c3b04dd99af326b75795ee4837979f4 165 SUPERFAMILY SSF101738 3 116 6.41E-46 T 23-04-2016 IPR007481 Stringent starvation protein B RR42_RS18805 8c3b04dd99af326b75795ee4837979f4 165 PANTHER PTHR37486:SF1 1 165 7.8E-47 T 23-04-2016 RR42_RS18805 8c3b04dd99af326b75795ee4837979f4 165 PANTHER PTHR37486 1 165 7.8E-47 T 23-04-2016 RR42_RS18805 8c3b04dd99af326b75795ee4837979f4 165 Pfam PF04386 Stringent starvation protein B 5 165 3.2E-37 T 23-04-2016 IPR007481 Stringent starvation protein B RR42_RS03140 46d6e3ee83323f4032278717aa3a147a 160 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 36.127 T 23-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 RR42_RS03140 46d6e3ee83323f4032278717aa3a147a 160 PANTHER PTHR22960 1 158 4.9E-89 T 23-04-2016 RR42_RS03140 46d6e3ee83323f4032278717aa3a147a 160 Gene3D G3DSA:3.30.70.640 3 158 3.6E-68 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 RR42_RS03140 46d6e3ee83323f4032278717aa3a147a 160 Pfam PF01967 MoaC family 15 150 2.2E-53 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 RR42_RS03140 46d6e3ee83323f4032278717aa3a147a 160 SUPERFAMILY SSF55040 11 155 2.22E-59 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 RR42_RS03140 46d6e3ee83323f4032278717aa3a147a 160 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 2.3E-59 T 23-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 RR42_RS04935 e76d7420b322e6e1191e7dbdbdc55bde 285 Pfam PF06889 Protein of unknown function (DUF1266) 101 274 6.5E-29 T 23-04-2016 IPR009677 Protein of unknown function DUF1266 RR42_RS05055 e7fe9b56326cb7fdf1de2a44a284b577 559 PANTHER PTHR19211 1 555 3.3E-264 T 23-04-2016 RR42_RS05055 e7fe9b56326cb7fdf1de2a44a284b577 559 SMART SM00382 347 524 5.8E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS05055 e7fe9b56326cb7fdf1de2a44a284b577 559 SMART SM00382 26 223 2.1E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS05055 e7fe9b56326cb7fdf1de2a44a284b577 559 Pfam PF12848 ABC transporter 217 298 2.3E-27 T 23-04-2016 IPR032781 ABC-transporter extension domain RR42_RS05055 e7fe9b56326cb7fdf1de2a44a284b577 559 Gene3D G3DSA:3.40.50.300 310 552 7.3E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05055 e7fe9b56326cb7fdf1de2a44a284b577 559 Gene3D G3DSA:3.40.50.300 1 266 4.1E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05055 e7fe9b56326cb7fdf1de2a44a284b577 559 PANTHER PTHR19211:SF49 1 555 3.3E-264 T 23-04-2016 RR42_RS05055 e7fe9b56326cb7fdf1de2a44a284b577 559 SUPERFAMILY SSF52540 286 516 1.83E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05055 e7fe9b56326cb7fdf1de2a44a284b577 559 SUPERFAMILY SSF52540 119 248 3.92E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05055 e7fe9b56326cb7fdf1de2a44a284b577 559 SUPERFAMILY SSF52540 2 92 3.92E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS05055 e7fe9b56326cb7fdf1de2a44a284b577 559 Pfam PF00005 ABC transporter 340 480 7.1E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS05055 e7fe9b56326cb7fdf1de2a44a284b577 559 Pfam PF00005 ABC transporter 17 178 2.9E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS05055 e7fe9b56326cb7fdf1de2a44a284b577 559 ProSitePatterns PS00211 ABC transporters family signature. 452 466 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS05055 e7fe9b56326cb7fdf1de2a44a284b577 559 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS08780 233fdabcda0e59c763ec9f7d8028ef89 305 PANTHER PTHR30217:SF8 12 302 6.5E-60 T 23-04-2016 RR42_RS08780 233fdabcda0e59c763ec9f7d8028ef89 305 Pfam PF01136 Peptidase family U32 118 258 8.5E-14 T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RR42_RS08780 233fdabcda0e59c763ec9f7d8028ef89 305 PANTHER PTHR30217 12 302 6.5E-60 T 23-04-2016 RR42_RS08170 0c674c38b07eac51edf191be6faaaff4 119 Pfam PF10765 Protein of unknown function (DUF2591) 2 109 3.6E-22 T 23-04-2016 IPR019701 Bacteriophage P22, NinX RR42_RS16725 8ccaf46f0a07b27cf80b040fa1b4f031 299 PANTHER PTHR21624 71 276 3.3E-68 T 23-04-2016 RR42_RS16725 8ccaf46f0a07b27cf80b040fa1b4f031 299 Pfam PF04116 Fatty acid hydroxylase superfamily 84 217 1.3E-29 T 23-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 RR42_RS16725 8ccaf46f0a07b27cf80b040fa1b4f031 299 PANTHER PTHR21624:SF1 71 276 3.3E-68 T 23-04-2016 RR42_RS24745 0bc2682d3cab540e600db0f2f7268480 213 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 58 210 1.2E-18 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS24745 0bc2682d3cab540e600db0f2f7268480 213 PANTHER PTHR11908 4 213 4.9E-70 T 23-04-2016 RR42_RS24745 0bc2682d3cab540e600db0f2f7268480 213 PANTHER PTHR11908:SF79 4 213 4.9E-70 T 23-04-2016 RR42_RS24745 0bc2682d3cab540e600db0f2f7268480 213 SUPERFAMILY SSF56003 59 212 6.8E-38 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS24745 0bc2682d3cab540e600db0f2f7268480 213 Gene3D G3DSA:3.30.365.10 59 180 8.4E-22 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS22970 9b418c7b81fce192c31d4537e53665a1 230 PANTHER PTHR11632 1 230 1.6E-71 T 23-04-2016 RR42_RS22970 9b418c7b81fce192c31d4537e53665a1 230 Pfam PF00890 FAD binding domain 1 230 7.6E-43 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RR42_RS22970 9b418c7b81fce192c31d4537e53665a1 230 SUPERFAMILY SSF51905 1 91 3.75E-22 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS22970 9b418c7b81fce192c31d4537e53665a1 230 SUPERFAMILY SSF51905 198 219 3.75E-22 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS22970 9b418c7b81fce192c31d4537e53665a1 230 SUPERFAMILY SSF56425 74 195 6.73E-33 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RR42_RS22970 9b418c7b81fce192c31d4537e53665a1 230 Gene3D G3DSA:3.90.700.10 80 190 7.2E-31 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RR42_RS22970 9b418c7b81fce192c31d4537e53665a1 230 Gene3D G3DSA:3.50.50.60 191 230 2.7E-37 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS22970 9b418c7b81fce192c31d4537e53665a1 230 Gene3D G3DSA:3.50.50.60 1 79 2.7E-37 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS07770 b60d171fdf5b4d4dad1697ae4c12740d 286 Pfam PF05235 CHAD domain 30 241 5.8E-26 T 23-04-2016 IPR007899 CHAD domain RR42_RS07770 b60d171fdf5b4d4dad1697ae4c12740d 286 SMART SM00880 20 277 2.5E-19 T 23-04-2016 IPR007899 CHAD domain RR42_RS11470 c9b4655c99414772b7a136e1578de795 90 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 11 89 5.3E-30 T 23-04-2016 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 UniPathway: UPA00539 RR42_RS11470 c9b4655c99414772b7a136e1578de795 90 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 28 89 3.7E-13 T 23-04-2016 IPR008792 Coenzyme PQQ synthesis D UniPathway: UPA00539 RR42_RS14365 3f1c2c87bb981a79694b18a08d039866 233 SUPERFAMILY SSF51366 14 228 3.45E-57 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RR42_RS14365 3f1c2c87bb981a79694b18a08d039866 233 PANTHER PTHR22854 12 229 3.5E-61 T 23-04-2016 RR42_RS14365 3f1c2c87bb981a79694b18a08d039866 233 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 16 225 1.5E-43 T 23-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 RR42_RS14365 3f1c2c87bb981a79694b18a08d039866 233 Gene3D G3DSA:3.20.20.70 13 229 5.0E-67 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RR42_RS14365 3f1c2c87bb981a79694b18a08d039866 233 PANTHER PTHR22854:SF6 12 229 3.5E-61 T 23-04-2016 RR42_RS14365 3f1c2c87bb981a79694b18a08d039866 233 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 14 230 40.168 T 23-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 RR42_RS01300 5770caa93794dce877d663ea5ea9724a 65 Pfam PF02597 ThiS family 5 65 4.8E-11 T 23-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 RR42_RS01300 5770caa93794dce877d663ea5ea9724a 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 65 1.1E-13 T 23-04-2016 IPR010035 ThiS, thiamine-biosynthesis RR42_RS01300 5770caa93794dce877d663ea5ea9724a 65 Gene3D G3DSA:3.10.20.30 1 65 9.7E-19 T 23-04-2016 IPR012675 Beta-grasp domain RR42_RS01300 5770caa93794dce877d663ea5ea9724a 65 SUPERFAMILY SSF54285 1 65 1.18E-12 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RR42_RS13640 9bf2165929e26c755ba015d25cc4d52c 174 Gene3D G3DSA:1.10.10.10 15 155 5.8E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS13640 9bf2165929e26c755ba015d25cc4d52c 174 SUPERFAMILY SSF46785 21 156 3.01E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS13640 9bf2165929e26c755ba015d25cc4d52c 174 SMART SM00347 43 144 1.8E-6 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS13640 9bf2165929e26c755ba015d25cc4d52c 174 Pfam PF12802 MarR family 49 98 2.0E-6 T 23-04-2016 RR42_RS00085 ae25a9ffe7eb37470c6d1cfd01ba21eb 97 Pfam PF07363 Protein of unknown function (DUF1484) 13 96 9.8E-19 T 23-04-2016 IPR009957 Protein of unknown function DUF1484 RR42_RS18325 7c4fa0870f88c86ef636e0480e0b19c2 90 SUPERFAMILY SSF54975 1 84 6.32E-25 T 23-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RR42_RS18325 7c4fa0870f88c86ef636e0480e0b19c2 90 Gene3D G3DSA:3.30.70.100 1 78 3.8E-26 T 23-04-2016 RR42_RS18325 7c4fa0870f88c86ef636e0480e0b19c2 90 PANTHER PTHR10029:SF3 1 72 1.2E-18 T 23-04-2016 RR42_RS18325 7c4fa0870f88c86ef636e0480e0b19c2 90 PRINTS PR00112 Acylphosphatase signature 24 49 2.76E-5 T 23-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RR42_RS18325 7c4fa0870f88c86ef636e0480e0b19c2 90 PRINTS PR00112 Acylphosphatase signature 3 18 2.76E-5 T 23-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RR42_RS18325 7c4fa0870f88c86ef636e0480e0b19c2 90 Pfam PF00708 Acylphosphatase 1 84 9.1E-23 T 23-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RR42_RS18325 7c4fa0870f88c86ef636e0480e0b19c2 90 PANTHER PTHR10029 1 72 1.2E-18 T 23-04-2016 RR42_RS18325 7c4fa0870f88c86ef636e0480e0b19c2 90 ProSitePatterns PS00151 Acylphosphatase signature 2. 32 48 - T 23-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RR42_RS09730 170221d47af62014809b30186c76d33c 375 Pfam PF12698 ABC-2 family transporter protein 24 364 2.2E-34 T 23-04-2016 RR42_RS09730 170221d47af62014809b30186c76d33c 375 PANTHER PTHR30294 1 368 2.9E-130 T 23-04-2016 RR42_RS09730 170221d47af62014809b30186c76d33c 375 PANTHER PTHR30294:SF22 1 368 2.9E-130 T 23-04-2016 RR42_RS23170 c1fced0760a10b429fefdf96acac4fa1 311 Gene3D G3DSA:3.30.365.10 77 183 1.5E-34 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS23170 c1fced0760a10b429fefdf96acac4fa1 311 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 46 304 1.2E-76 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS23170 c1fced0760a10b429fefdf96acac4fa1 311 Gene3D G3DSA:3.30.365.10 264 310 1.0E-7 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS23170 c1fced0760a10b429fefdf96acac4fa1 311 PANTHER PTHR11908 1 311 2.0E-132 T 23-04-2016 RR42_RS23170 c1fced0760a10b429fefdf96acac4fa1 311 SUPERFAMILY SSF56003 23 311 1.7E-85 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS23170 c1fced0760a10b429fefdf96acac4fa1 311 PANTHER PTHR11908:SF85 1 311 2.0E-132 T 23-04-2016 RR42_RS23170 c1fced0760a10b429fefdf96acac4fa1 311 SUPERFAMILY SSF54665 1 32 6.98E-8 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RR42_RS23170 c1fced0760a10b429fefdf96acac4fa1 311 Gene3D G3DSA:3.30.365.10 185 261 9.8E-52 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS23170 c1fced0760a10b429fefdf96acac4fa1 311 Gene3D G3DSA:3.30.365.10 8 76 9.8E-52 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RR42_RS23170 c1fced0760a10b429fefdf96acac4fa1 311 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 1 31 3.1E-5 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RR42_RS34625 404510c88af2b2b6b44e91669421cb72 338 PANTHER PTHR12338 2 338 1.5E-122 T 23-04-2016 RR42_RS34625 404510c88af2b2b6b44e91669421cb72 338 PANTHER PTHR12338:SF6 2 338 1.5E-122 T 23-04-2016 RR42_RS18080 d2d6efc0dad364b8362a3d2a57b5a445 413 PANTHER PTHR30474 24 405 2.9E-141 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RR42_RS18080 d2d6efc0dad364b8362a3d2a57b5a445 413 PANTHER PTHR30474:SF2 24 405 2.9E-141 T 23-04-2016 RR42_RS18080 d2d6efc0dad364b8362a3d2a57b5a445 413 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 42 403 9.7E-123 T 23-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 RR42_RS18080 d2d6efc0dad364b8362a3d2a57b5a445 413 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 39 412 40.115 T 23-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 RR42_RS18080 d2d6efc0dad364b8362a3d2a57b5a445 413 Pfam PF01098 Cell cycle protein 44 405 1.3E-104 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RR42_RS04420 4216c790a77088b4cc69668d86f3b9b4 160 Pfam PF08909 Domain of unknown function (DUF1854) 30 159 6.1E-52 T 23-04-2016 IPR015005 Domain of unknown function DUF1854 RR42_RS19875 d8348e8d983c23bf956e94d0efd2e9da 297 PANTHER PTHR30168 2 297 3.6E-129 T 23-04-2016 RR42_RS19875 d8348e8d983c23bf956e94d0efd2e9da 297 Pfam PF04228 Putative neutral zinc metallopeptidase 1 292 7.7E-118 T 23-04-2016 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative RR42_RS02210 cd411f00fb07fb40bd02ea1692405763 117 SUPERFAMILY SSF81343 11 112 3.92E-15 T 23-04-2016 RR42_RS02210 cd411f00fb07fb40bd02ea1692405763 117 Gene3D G3DSA:1.20.950.10 11 113 7.7E-12 T 23-04-2016 RR42_RS02210 cd411f00fb07fb40bd02ea1692405763 117 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 9 103 5.5E-6 T 23-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 RR42_RS16060 c9dd9bf4643a3fefe748a8323f8829f9 410 Pfam PF03929 PepSY-associated TM region 12 376 5.8E-55 T 23-04-2016 IPR005625 PepSY-associated TM protein RR42_RS16060 c9dd9bf4643a3fefe748a8323f8829f9 410 PANTHER PTHR34219 1 392 2.4E-54 T 23-04-2016 RR42_RS03335 31a2f7163f9353e16440e5e8f7dbe31a 205 PANTHER PTHR30309:SF0 1 202 1.4E-70 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 RR42_RS03335 31a2f7163f9353e16440e5e8f7dbe31a 205 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 3 198 3.1E-58 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 RR42_RS03335 31a2f7163f9353e16440e5e8f7dbe31a 205 PANTHER PTHR30309 1 202 1.4E-70 T 23-04-2016 RR42_RS03335 31a2f7163f9353e16440e5e8f7dbe31a 205 Pfam PF02660 Glycerol-3-phosphate acyltransferase 10 188 2.9E-49 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 RR42_RS03335 31a2f7163f9353e16440e5e8f7dbe31a 205 SMART SM01207 8 189 5.1E-81 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 RR42_RS03335 31a2f7163f9353e16440e5e8f7dbe31a 205 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 197 19.814 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 RR42_RS01650 1112ca60d5ad0e5352ca72befd47043b 271 Pfam PF00005 ABC transporter 20 171 1.1E-24 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS01650 1112ca60d5ad0e5352ca72befd47043b 271 PANTHER PTHR24220 5 270 5.1E-117 T 23-04-2016 RR42_RS01650 1112ca60d5ad0e5352ca72befd47043b 271 Gene3D G3DSA:3.40.50.300 3 239 1.7E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01650 1112ca60d5ad0e5352ca72befd47043b 271 SMART SM00382 29 221 1.3E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS01650 1112ca60d5ad0e5352ca72befd47043b 271 SUPERFAMILY SSF52540 3 243 1.39E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS01650 1112ca60d5ad0e5352ca72befd47043b 271 PANTHER PTHR24220:SF458 5 270 5.1E-117 T 23-04-2016 RR42_RS11455 19d60868d14dd5ae2818e0315849516d 309 Pfam PF00561 alpha/beta hydrolase fold 35 288 1.6E-24 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS11455 19d60868d14dd5ae2818e0315849516d 309 PRINTS PR00111 Alpha/beta hydrolase fold signature 117 130 1.3E-8 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS11455 19d60868d14dd5ae2818e0315849516d 309 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 1.3E-8 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS11455 19d60868d14dd5ae2818e0315849516d 309 PRINTS PR00111 Alpha/beta hydrolase fold signature 57 72 1.3E-8 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RR42_RS11455 19d60868d14dd5ae2818e0315849516d 309 PANTHER PTHR10992 11 142 5.1E-46 T 23-04-2016 RR42_RS11455 19d60868d14dd5ae2818e0315849516d 309 PANTHER PTHR10992 175 308 5.1E-46 T 23-04-2016 RR42_RS11455 19d60868d14dd5ae2818e0315849516d 309 PANTHER PTHR10992:SF757 11 142 5.1E-46 T 23-04-2016 RR42_RS11455 19d60868d14dd5ae2818e0315849516d 309 PANTHER PTHR10992:SF757 175 308 5.1E-46 T 23-04-2016 RR42_RS11455 19d60868d14dd5ae2818e0315849516d 309 Gene3D G3DSA:3.40.50.1820 14 304 4.0E-53 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS11455 19d60868d14dd5ae2818e0315849516d 309 SUPERFAMILY SSF53474 5 302 1.88E-48 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RR42_RS11455 19d60868d14dd5ae2818e0315849516d 309 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 103 117 3.7E-11 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 RR42_RS11455 19d60868d14dd5ae2818e0315849516d 309 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 34 42 3.7E-11 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 RR42_RS11455 19d60868d14dd5ae2818e0315849516d 309 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 60 71 3.7E-11 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 RR42_RS18975 6e3532548106f6add4956444646ee13e 367 PANTHER PTHR30349:SF16 62 359 1.3E-54 T 23-04-2016 RR42_RS18975 6e3532548106f6add4956444646ee13e 367 PIRSF PIRSF017082 34 364 1.7E-61 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS18975 6e3532548106f6add4956444646ee13e 367 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 91 361 1.9E-60 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS18975 6e3532548106f6add4956444646ee13e 367 SUPERFAMILY SSF53850 153 324 1.99E-5 T 23-04-2016 RR42_RS18975 6e3532548106f6add4956444646ee13e 367 PANTHER PTHR30349 62 359 1.3E-54 T 23-04-2016 RR42_RS08595 14f4c06a0060eeb4d1863b0aee9da175 148 Pfam PF05069 Phage virion morphogenesis family 3 146 5.3E-37 T 23-04-2016 IPR006522 Phage virion morphogensis protein RR42_RS08595 14f4c06a0060eeb4d1863b0aee9da175 148 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 3 146 7.1E-35 T 23-04-2016 IPR006522 Phage virion morphogensis protein RR42_RS02975 3c8359baf09c8a94d5d91d1037fe81ad 258 Pfam PF03818 Malonate/sodium symporter MadM subunit 8 65 2.8E-24 T 23-04-2016 IPR018402 Malonate/sodium symporter MadM subunit, N-terminal RR42_RS02975 3c8359baf09c8a94d5d91d1037fe81ad 258 TIGRFAM TIGR00808 malonate_madM: malonate transporter, MadM subunit 7 258 1.4E-124 T 23-04-2016 IPR004691 Malonate/sodium symporter MadM subunit GO:0044668 RR42_RS12915 1704fe0d58a4484033d81ec1a57e957e 48 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 46 2.3E-15 T 23-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type RR42_RS12915 1704fe0d58a4484033d81ec1a57e957e 48 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 1.5E-19 T 23-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type RR42_RS05945 bc98fa0b4eb671789e459c1c214b3b76 146 SUPERFAMILY SSF52833 17 135 2.3E-21 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS05945 bc98fa0b4eb671789e459c1c214b3b76 146 Gene3D G3DSA:3.40.30.10 33 133 1.7E-11 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS05945 bc98fa0b4eb671789e459c1c214b3b76 146 Pfam PF00085 Thioredoxin 47 132 3.4E-5 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 RR42_RS09510 53cfdd08c13b3e37b7b999ba671f4616 317 SUPERFAMILY SSF51126 28 226 1.73E-5 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor RR42_RS16985 35bfb6f1d575f0a2059e1a492936acbf 320 PANTHER PTHR30426 10 315 4.6E-151 T 23-04-2016 RR42_RS16985 35bfb6f1d575f0a2059e1a492936acbf 320 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 11 289 6.9E-100 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 RR42_RS16985 35bfb6f1d575f0a2059e1a492936acbf 320 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 10 292 37.701 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 RR42_RS16985 35bfb6f1d575f0a2059e1a492936acbf 320 Pfam PF02401 LytB protein 12 288 9.7E-93 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 RR42_RS05130 aca4c0782fc47665772cf1ac0d9a9b3d 137 Gene3D G3DSA:3.30.1330.40 7 135 1.0E-34 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RR42_RS05130 aca4c0782fc47665772cf1ac0d9a9b3d 137 SUPERFAMILY SSF55298 9 134 2.51E-31 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RR42_RS05130 aca4c0782fc47665772cf1ac0d9a9b3d 137 Pfam PF01042 Endoribonuclease L-PSP 7 130 3.2E-21 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family RR42_RS05130 aca4c0782fc47665772cf1ac0d9a9b3d 137 PANTHER PTHR11803 9 135 1.0E-28 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family RR42_RS17815 4fa53c7e223fcfc17085d9c58fe9b091 192 Pfam PF04366 Las17-binding protein actin regulator 105 188 1.2E-14 T 23-04-2016 IPR007461 Ysc84 actin-binding domain RR42_RS01690 d1584a5e003d3364d74c1ba8a480c7b3 106 PANTHER PTHR11780:SF12 6 104 3.0E-29 T 23-04-2016 RR42_RS01690 d1584a5e003d3364d74c1ba8a480c7b3 106 PANTHER PTHR11780 6 104 3.0E-29 T 23-04-2016 RR42_RS01690 d1584a5e003d3364d74c1ba8a480c7b3 106 SUPERFAMILY SSF52833 5 103 1.68E-26 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS01690 d1584a5e003d3364d74c1ba8a480c7b3 106 Gene3D G3DSA:3.40.30.10 5 104 1.1E-32 T 23-04-2016 IPR012336 Thioredoxin-like fold RR42_RS12260 1b39c76a8daaa42c9c9634b1a8bba9df 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 296 9.5E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS12260 1b39c76a8daaa42c9c9634b1a8bba9df 314 PANTHER PTHR30406:SF6 8 304 1.3E-167 T 23-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 RR42_RS12260 1b39c76a8daaa42c9c9634b1a8bba9df 314 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 32 295 2.3E-100 T 23-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 RR42_RS12260 1b39c76a8daaa42c9c9634b1a8bba9df 314 Gene3D G3DSA:1.10.3720.10 46 301 6.0E-55 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS12260 1b39c76a8daaa42c9c9634b1a8bba9df 314 PANTHER PTHR30406 8 304 1.3E-167 T 23-04-2016 RR42_RS12260 1b39c76a8daaa42c9c9634b1a8bba9df 314 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 36 299 3.1E-129 T 23-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 RR42_RS12260 1b39c76a8daaa42c9c9634b1a8bba9df 314 SUPERFAMILY SSF161098 43 293 1.1E-55 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS01920 f425428fda3beff2e768c72768928937 311 PANTHER PTHR11048 19 308 3.4E-73 T 23-04-2016 RR42_RS01920 f425428fda3beff2e768c72768928937 311 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 26 303 5.9E-89 T 23-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 RR42_RS01920 f425428fda3beff2e768c72768928937 311 Pfam PF01040 UbiA prenyltransferase family 39 287 1.8E-58 T 23-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 RR42_RS01920 f425428fda3beff2e768c72768928937 311 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 23 304 18.989 T 23-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 RR42_RS17865 0f4b01435aa11ded6d3242220219f358 209 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 46 184 3.6E-18 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RR42_RS17865 0f4b01435aa11ded6d3242220219f358 209 SMART SM00644 35 183 2.2E-50 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RR42_RS17865 0f4b01435aa11ded6d3242220219f358 209 SUPERFAMILY SSF55846 23 194 3.01E-61 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RR42_RS17865 0f4b01435aa11ded6d3242220219f358 209 PANTHER PTHR30417 25 194 6.8E-62 T 23-04-2016 RR42_RS17865 0f4b01435aa11ded6d3242220219f358 209 Gene3D G3DSA:3.40.80.10 24 195 1.6E-64 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RR42_RS17865 0f4b01435aa11ded6d3242220219f358 209 PANTHER PTHR30417:SF4 25 194 6.8E-62 T 23-04-2016 RR42_RS03870 c0e429922c777122be720e7601214f5d 64 Pfam PF06348 Protein of unknown function (DUF1059) 4 59 1.6E-12 T 23-04-2016 IPR009409 Protein of unknown function DUF1059 RR42_RS18280 034a135e6d3661f6b0725d226f15f890 124 Hamap MF_00791 Protein ApaG [apaG]. 1 124 31.295 T 23-04-2016 IPR023065 Uncharacterised protein family ApaG RR42_RS18280 034a135e6d3661f6b0725d226f15f890 124 SUPERFAMILY SSF110069 6 124 3.27E-48 T 23-04-2016 IPR007474 ApaG domain RR42_RS18280 034a135e6d3661f6b0725d226f15f890 124 Pfam PF04379 Protein of unknown function (DUF525) 17 101 2.4E-34 T 23-04-2016 IPR007474 ApaG domain RR42_RS18280 034a135e6d3661f6b0725d226f15f890 124 PANTHER PTHR14289 8 121 1.3E-42 T 23-04-2016 RR42_RS18280 034a135e6d3661f6b0725d226f15f890 124 Gene3D G3DSA:2.60.40.1470 6 124 9.2E-46 T 23-04-2016 IPR007474 ApaG domain RR42_RS20480 aadfd2df85c28c3c958aaceb632bb61f 378 PANTHER PTHR32039:SF8 77 376 9.3E-99 T 23-04-2016 RR42_RS20480 aadfd2df85c28c3c958aaceb632bb61f 378 PANTHER PTHR32039 77 376 9.3E-99 T 23-04-2016 RR42_RS20480 aadfd2df85c28c3c958aaceb632bb61f 378 Gene3D G3DSA:1.10.10.10 333 375 1.4E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS20480 aadfd2df85c28c3c958aaceb632bb61f 378 Gene3D G3DSA:3.40.50.450 132 303 6.1E-13 T 23-04-2016 RR42_RS20480 aadfd2df85c28c3c958aaceb632bb61f 378 Pfam PF02481 DNA recombination-mediator protein A 92 296 4.6E-73 T 23-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 RR42_RS20480 aadfd2df85c28c3c958aaceb632bb61f 378 SUPERFAMILY SSF102405 99 305 9.01E-43 T 23-04-2016 RR42_RS20480 aadfd2df85c28c3c958aaceb632bb61f 378 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 89 305 1.5E-75 T 23-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 RR42_RS06985 82f6109b7f8be3bf028b32be868c4502 233 SUPERFAMILY SSF49899 44 221 2.45E-6 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RR42_RS06985 82f6109b7f8be3bf028b32be868c4502 233 Gene3D G3DSA:2.60.120.200 45 216 6.3E-5 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RR42_RS15215 e0bb0cc991e6358b003de7479b94360f 479 SUPERFAMILY SSF89796 217 414 3.79E-56 T 23-04-2016 IPR023606 CoA-transferase family III domain RR42_RS15215 e0bb0cc991e6358b003de7479b94360f 479 Gene3D G3DSA:3.40.50.10540 40 185 9.4E-13 T 23-04-2016 IPR023606 CoA-transferase family III domain RR42_RS15215 e0bb0cc991e6358b003de7479b94360f 479 Pfam PF02515 CoA-transferase family III 219 410 2.2E-46 T 23-04-2016 IPR003673 CoA-transferase family III GO:0003824 RR42_RS15215 e0bb0cc991e6358b003de7479b94360f 479 Pfam PF02515 CoA-transferase family III 42 192 1.3E-5 T 23-04-2016 IPR003673 CoA-transferase family III GO:0003824 RR42_RS15215 e0bb0cc991e6358b003de7479b94360f 479 Gene3D G3DSA:3.40.50.10540 216 476 7.1E-74 T 23-04-2016 IPR023606 CoA-transferase family III domain RR42_RS15215 e0bb0cc991e6358b003de7479b94360f 479 SUPERFAMILY SSF89796 40 210 2.75E-28 T 23-04-2016 IPR023606 CoA-transferase family III domain RR42_RS04190 3a5bbb2e8e38ae173114c74ea00f88fc 319 Pfam PF14378 PAP2 superfamily 115 295 1.7E-36 T 23-04-2016 IPR026841 Inositolphosphotransferase Aur1/Ipt1 RR42_RS01545 009afb1c0dce93793ab662ede236fdcf 217 SUPERFAMILY SSF46689 27 100 2.21E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS01545 009afb1c0dce93793ab662ede236fdcf 217 Gene3D G3DSA:1.10.357.10 29 204 1.2E-21 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RR42_RS01545 009afb1c0dce93793ab662ede236fdcf 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 75 2.2E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RR42_RS08045 2079f0bc62401e313bbb96e8580c1174 183 Pfam PF14354 Restriction alleviation protein Lar 16 73 6.8E-9 T 23-04-2016 RR42_RS20590 d6ca74c847ceb9b6193a269d89fc5b5f 309 Pfam PF01734 Patatin-like phospholipase 24 227 1.4E-21 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RR42_RS20590 d6ca74c847ceb9b6193a269d89fc5b5f 309 SUPERFAMILY SSF52151 23 142 5.23E-26 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RR42_RS20590 d6ca74c847ceb9b6193a269d89fc5b5f 309 SUPERFAMILY SSF52151 185 246 5.23E-26 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RR42_RS30015 e44222c187e7a6a60205cb5b3246d18b 408 Gene3D G3DSA:1.25.40.10 31 159 5.9E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS30015 e44222c187e7a6a60205cb5b3246d18b 408 SUPERFAMILY SSF48452 64 173 2.23E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS14820 79fd54b4cff981d00f1891a8979c80c4 219 Pfam PF07290 Protein of unknown function (DUF1449) 9 212 4.0E-60 T 23-04-2016 IPR010840 Protein of unknown function DUF1449 RR42_RS18220 2fabdb2ff9b16eb2b6277bedab7845f1 318 Pfam PF11249 Protein of unknown function (DUF3047) 122 315 2.7E-60 T 23-04-2016 IPR021409 Protein of unknown function DUF3047 RR42_RS16030 68f7c1ac5ca0231c78c82e23471484b6 180 Pfam PF04355 SmpA / OmlA family 104 169 3.7E-5 T 23-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 RR42_RS02805 ac74a31c073f4b96c4eb063a830dbfe5 294 PANTHER PTHR30399 58 286 5.4E-44 T 23-04-2016 RR42_RS02805 ac74a31c073f4b96c4eb063a830dbfe5 294 Pfam PF01863 Protein of unknown function DUF45 77 286 2.5E-60 T 23-04-2016 IPR002725 Protein of unknown function DUF45 RR42_RS07620 5ca70575a3feced1fbf83e6cbba39306 183 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 11 70 1.7E-30 T 23-04-2016 IPR012909 PHA accumulation regulator DNA-binding, N-terminal RR42_RS07620 5ca70575a3feced1fbf83e6cbba39306 183 Pfam PF05233 PHB accumulation regulatory domain 75 113 5.0E-18 T 23-04-2016 IPR007897 PHB accumulation regulatory RR42_RS07620 5ca70575a3feced1fbf83e6cbba39306 183 Pfam PF05233 PHB accumulation regulatory domain 126 165 8.6E-18 T 23-04-2016 IPR007897 PHB accumulation regulatory RR42_RS07620 5ca70575a3feced1fbf83e6cbba39306 183 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 10 115 4.8E-45 T 23-04-2016 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR RR42_RS17330 43c6a649a6e0526bb3448809431f2a90 135 PANTHER PTHR33993 1 132 5.0E-37 T 23-04-2016 RR42_RS17330 43c6a649a6e0526bb3448809431f2a90 135 PANTHER PTHR33993:SF4 1 132 5.0E-37 T 23-04-2016 RR42_RS17330 43c6a649a6e0526bb3448809431f2a90 135 SUPERFAMILY SSF54593 19 133 7.01E-19 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS17330 43c6a649a6e0526bb3448809431f2a90 135 Gene3D G3DSA:3.10.180.10 19 132 4.8E-26 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS16760 1692220c4e7fa815349332f2e72fcf49 559 Pfam PF01266 FAD dependent oxidoreductase 39 398 2.2E-43 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RR42_RS16760 1692220c4e7fa815349332f2e72fcf49 559 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 67 79 1.5E-24 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RR42_RS16760 1692220c4e7fa815349332f2e72fcf49 559 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 112 124 1.5E-24 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RR42_RS16760 1692220c4e7fa815349332f2e72fcf49 559 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 388 400 1.5E-24 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RR42_RS16760 1692220c4e7fa815349332f2e72fcf49 559 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 38 50 1.5E-24 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RR42_RS16760 1692220c4e7fa815349332f2e72fcf49 559 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 51 61 1.5E-24 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RR42_RS16760 1692220c4e7fa815349332f2e72fcf49 559 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 358 364 1.5E-24 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RR42_RS16760 1692220c4e7fa815349332f2e72fcf49 559 PANTHER PTHR11985 26 550 1.7E-144 T 23-04-2016 RR42_RS16760 1692220c4e7fa815349332f2e72fcf49 559 SUPERFAMILY SSF51905 31 133 3.89E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS16760 1692220c4e7fa815349332f2e72fcf49 559 SUPERFAMILY SSF51905 179 267 3.89E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS16760 1692220c4e7fa815349332f2e72fcf49 559 Gene3D G3DSA:3.50.50.60 36 279 1.5E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RR42_RS16760 1692220c4e7fa815349332f2e72fcf49 559 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 420 534 2.3E-21 T 23-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RR42_RS16760 1692220c4e7fa815349332f2e72fcf49 559 SUPERFAMILY SSF54373 270 364 1.22E-6 T 23-04-2016 RR42_RS26400 05369b019179ce508482ea67b1032672 253 Pfam PF07394 Protein of unknown function (DUF1501) 2 253 7.6E-14 T 23-04-2016 IPR010869 Protein of unknown function DUF1501 RR42_RS06750 e1ae4e6d3f130cfde6c7d2043582272a 72 Pfam PF14090 Helix-turn-helix domain 2 63 1.1E-9 T 23-04-2016 RR42_RS06195 2216cb36bac6ddc0c4e637c5f57d8a85 174 SUPERFAMILY SSF51161 4 169 3.6E-48 T 23-04-2016 IPR011004 Trimeric LpxA-like RR42_RS06195 2216cb36bac6ddc0c4e637c5f57d8a85 174 PANTHER PTHR13061 1 159 3.1E-67 T 23-04-2016 RR42_RS06195 2216cb36bac6ddc0c4e637c5f57d8a85 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 45 0.0016 T 23-04-2016 IPR001451 Hexapeptide repeat RR42_RS06195 2216cb36bac6ddc0c4e637c5f57d8a85 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 1.7E-7 T 23-04-2016 IPR001451 Hexapeptide repeat RR42_RS06195 2216cb36bac6ddc0c4e637c5f57d8a85 174 Gene3D G3DSA:2.160.10.10 5 168 1.0E-47 T 23-04-2016 RR42_RS01565 620c35f23cf1ad21d5738efe89e08360 192 SUPERFAMILY SSF56925 60 192 4.19E-10 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RR42_RS01565 620c35f23cf1ad21d5738efe89e08360 192 PIRSF PIRSF029681 6 192 6.2E-58 T 23-04-2016 IPR018550 Lipid A 3-O-deacylase-related RR42_RS01565 620c35f23cf1ad21d5738efe89e08360 192 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 58 191 7.3E-23 T 23-04-2016 IPR018550 Lipid A 3-O-deacylase-related RR42_RS01565 620c35f23cf1ad21d5738efe89e08360 192 Gene3D G3DSA:2.40.160.20 39 192 3.9E-41 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RR42_RS15640 fcdc01d72bdbbcc4ea22ddf868cbb276 94 PANTHER PTHR36931 6 90 1.9E-33 T 23-04-2016 RR42_RS15640 fcdc01d72bdbbcc4ea22ddf868cbb276 94 Pfam PF03692 Putative zinc- or iron-chelating domain 9 63 6.0E-5 T 23-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein RR42_RS37605 e3afdee58e853afff9927d7afe8c988a 442 Pfam PF07120 Protein of unknown function (DUF1376) 2 89 5.4E-24 T 23-04-2016 IPR010781 Protein of unknown function DUF1376 RR42_RS15770 91295e4b3e9df1638af2db1503a05b50 365 SUPERFAMILY SSF53756 119 258 5.02E-8 T 23-04-2016 RR42_RS15660 2fdf2d67cce2e3e85ec656795de08fe5 217 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 10 206 3.3E-36 T 23-04-2016 RR42_RS15660 2fdf2d67cce2e3e85ec656795de08fe5 217 SUPERFAMILY SSF53335 1 179 1.81E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS15660 2fdf2d67cce2e3e85ec656795de08fe5 217 PANTHER PTHR11579 1 170 9.8E-37 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RR42_RS15660 2fdf2d67cce2e3e85ec656795de08fe5 217 Gene3D G3DSA:3.40.50.150 10 214 2.5E-54 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS15660 2fdf2d67cce2e3e85ec656795de08fe5 217 PANTHER PTHR11579:SF0 1 170 9.8E-37 T 23-04-2016 RR42_RS20660 462f7ea921ead8341ea02ed2b1169398 152 PANTHER PTHR23091 1 146 1.6E-13 T 23-04-2016 RR42_RS20660 462f7ea921ead8341ea02ed2b1169398 152 Pfam PF00583 Acetyltransferase (GNAT) family 59 141 9.1E-12 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RR42_RS20660 462f7ea921ead8341ea02ed2b1169398 152 SUPERFAMILY SSF55729 1 145 1.1E-24 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS20660 462f7ea921ead8341ea02ed2b1169398 152 Gene3D G3DSA:3.40.630.30 1 135 1.4E-27 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS14575 9704d1e91b4dd70c26323ead28f2f964 212 Pfam PF01810 LysE type translocator 23 205 3.7E-10 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RR42_RS14575 9704d1e91b4dd70c26323ead28f2f964 212 PANTHER PTHR30086 9 212 2.0E-39 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RR42_RS14575 9704d1e91b4dd70c26323ead28f2f964 212 PANTHER PTHR30086:SF12 9 212 2.0E-39 T 23-04-2016 RR42_RS08555 17806d874ab8944d5e0cfa869b0fa515 169 PANTHER PTHR35861 1 169 4.2E-64 T 23-04-2016 RR42_RS08555 17806d874ab8944d5e0cfa869b0fa515 169 Pfam PF04985 Phage tail tube protein FII 4 168 9.4E-61 T 23-04-2016 IPR006498 Tail tube protein RR42_RS08555 17806d874ab8944d5e0cfa869b0fa515 169 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 169 1.4E-69 T 23-04-2016 IPR006498 Tail tube protein RR42_RS08555 17806d874ab8944d5e0cfa869b0fa515 169 PANTHER PTHR35861:SF2 1 169 4.2E-64 T 23-04-2016 RR42_RS20580 a023d8facc410cff4e58db2c35ebddb7 273 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 21 222 2.4E-39 T 23-04-2016 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN RR42_RS20580 a023d8facc410cff4e58db2c35ebddb7 273 SUPERFAMILY SSF159501 18 253 8.63E-50 T 23-04-2016 RR42_RS05080 0662c0f1b520e2db82de041b77a2ae94 186 Pfam PF06052 3-hydroxyanthranilic acid dioxygenase 6 154 1.3E-45 T 23-04-2016 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|UniPathway: UPA00253 RR42_RS05080 0662c0f1b520e2db82de041b77a2ae94 186 Gene3D G3DSA:2.60.120.10 7 115 6.0E-16 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RR42_RS05080 0662c0f1b520e2db82de041b77a2ae94 186 PANTHER PTHR15497 4 177 2.5E-59 T 23-04-2016 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|UniPathway: UPA00253 RR42_RS05080 0662c0f1b520e2db82de041b77a2ae94 186 Hamap MF_00825 3-hydroxyanthranilate 3,4-dioxygenase [nbaC]. 4 172 33.45 T 23-04-2016 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|UniPathway: UPA00253 RR42_RS05080 0662c0f1b520e2db82de041b77a2ae94 186 TIGRFAM TIGR03037 anthran_nbaC: 3-hydroxyanthranilate 3,4-dioxygenase 8 167 5.3E-76 T 23-04-2016 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|UniPathway: UPA00253 RR42_RS05080 0662c0f1b520e2db82de041b77a2ae94 186 SUPERFAMILY SSF51182 3 172 8.91E-54 T 23-04-2016 IPR011051 RmlC-like cupin domain RR42_RS09245 2befc1a52b3f0f97af6b4ad80a8debe3 67 SUPERFAMILY SSF46689 18 61 5.38E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS09245 2befc1a52b3f0f97af6b4ad80a8debe3 67 Gene3D G3DSA:1.10.10.60 19 59 1.2E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RR42_RS09245 2befc1a52b3f0f97af6b4ad80a8debe3 67 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 44 60 3.5E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RR42_RS09245 2befc1a52b3f0f97af6b4ad80a8debe3 67 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 29 44 3.5E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RR42_RS09245 2befc1a52b3f0f97af6b4ad80a8debe3 67 Pfam PF12833 Helix-turn-helix domain 17 60 1.3E-9 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RR42_RS17005 1f189a95086dfbb5eb1b1d7ed63f1c14 56 Pfam PF00471 Ribosomal protein L33 9 54 5.0E-18 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS17005 1f189a95086dfbb5eb1b1d7ed63f1c14 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 6.9E-27 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS17005 1f189a95086dfbb5eb1b1d7ed63f1c14 56 PANTHER PTHR15238 1 56 7.7E-22 T 23-04-2016 RR42_RS17005 1f189a95086dfbb5eb1b1d7ed63f1c14 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 23-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS17005 1f189a95086dfbb5eb1b1d7ed63f1c14 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 14.48 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RR42_RS17005 1f189a95086dfbb5eb1b1d7ed63f1c14 56 SUPERFAMILY SSF57829 3 54 2.99E-19 T 23-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 RR42_RS08440 7a101fb4b4bc36d55fbd0191216a8018 213 SUPERFAMILY SSF143081 2 205 7.33E-52 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RR42_RS08440 7a101fb4b4bc36d55fbd0191216a8018 213 Pfam PF02586 SOS response associated peptidase (SRAP) 29 203 4.4E-27 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RR42_RS08440 7a101fb4b4bc36d55fbd0191216a8018 213 Gene3D G3DSA:3.90.1680.10 1 206 2.5E-32 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RR42_RS08440 7a101fb4b4bc36d55fbd0191216a8018 213 PANTHER PTHR13604 32 205 6.3E-21 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RR42_RS15635 5540d7afbe5dde5961b3d06cb8c8b744 186 Pfam PF07273 Protein of unknown function (DUF1439) 34 166 4.4E-17 T 23-04-2016 IPR010835 Protein of unknown function DUF1439 RR42_RS03330 bac537c389d7122627a4abda44a4bf3c 97 Pfam PF08734 GYD domain 4 92 2.2E-30 T 23-04-2016 IPR014845 Uncharacterised protein GYD RR42_RS03880 32bd56e9cbb5244af9edd7356ee87729 218 Gene3D G3DSA:3.40.50.10610 28 213 2.0E-21 T 23-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component RR42_RS03880 32bd56e9cbb5244af9edd7356ee87729 218 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 54 206 7.7E-32 T 23-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component RR42_RS03880 32bd56e9cbb5244af9edd7356ee87729 218 SUPERFAMILY SSF159594 36 211 8.63E-29 T 23-04-2016 RR42_RS03690 72c0eb4b7889e057e7078f45d0b82665 73 Gene3D G3DSA:1.10.10.10 4 65 3.3E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS12690 2da2f5d0842e0e9c79cdb8d083319f9b 158 Pfam PF04970 Lecithin retinol acyltransferase 17 116 5.3E-21 T 23-04-2016 IPR007053 LRAT-like domain RR42_RS12690 2da2f5d0842e0e9c79cdb8d083319f9b 158 PANTHER PTHR13943 26 123 2.7E-12 T 23-04-2016 RR42_RS12075 40c5393230ba4c5e61da9666130bff47 156 Pfam PF08982 Domain of unknown function (DUF1857) 8 151 7.0E-32 T 23-04-2016 IPR015075 Protein of unknown function DUF1857 RR42_RS12075 40c5393230ba4c5e61da9666130bff47 156 Gene3D G3DSA:3.30.530.20 2 155 5.0E-59 T 23-04-2016 IPR023393 START-like domain RR42_RS12075 40c5393230ba4c5e61da9666130bff47 156 SUPERFAMILY SSF55961 2 150 6.59E-46 T 23-04-2016 RR42_RS16355 6b7c0becf318a73628f7c74f24d9a23d 336 SUPERFAMILY SSF56935 5 336 3.5E-63 T 23-04-2016 RR42_RS16355 6b7c0becf318a73628f7c74f24d9a23d 336 Gene3D G3DSA:2.40.160.10 5 336 9.3E-76 T 23-04-2016 IPR023614 Porin domain RR42_RS16355 6b7c0becf318a73628f7c74f24d9a23d 336 PRINTS PR00184 Neisseria sp. porin signature 37 62 2.3E-5 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RR42_RS16355 6b7c0becf318a73628f7c74f24d9a23d 336 PRINTS PR00184 Neisseria sp. porin signature 135 152 2.3E-5 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RR42_RS16355 6b7c0becf318a73628f7c74f24d9a23d 336 PRINTS PR00184 Neisseria sp. porin signature 270 294 2.3E-5 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RR42_RS16355 6b7c0becf318a73628f7c74f24d9a23d 336 Pfam PF13609 Gram-negative porin 1 298 2.5E-45 T 23-04-2016 RR42_RS03180 cdecfc29708c7052383f48748dc46de8 346 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 68 341 5.9E-77 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS03180 cdecfc29708c7052383f48748dc46de8 346 PIRSF PIRSF017082 11 346 1.6E-73 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS03180 cdecfc29708c7052383f48748dc46de8 346 SUPERFAMILY SSF53850 132 304 4.05E-12 T 23-04-2016 RR42_RS03180 cdecfc29708c7052383f48748dc46de8 346 PANTHER PTHR30349:SF16 31 346 7.9E-81 T 23-04-2016 RR42_RS03180 cdecfc29708c7052383f48748dc46de8 346 PANTHER PTHR30349 31 346 7.9E-81 T 23-04-2016 RR42_RS19725 54d716879f51e101abd79eb67b4993b1 276 SMART SM00749 71 134 89.0 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria RR42_RS19725 54d716879f51e101abd79eb67b4993b1 276 SMART SM00749 149 212 4.1E-10 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria RR42_RS19725 54d716879f51e101abd79eb67b4993b1 276 PANTHER PTHR34606:SF4 29 221 3.1E-45 T 23-04-2016 RR42_RS19725 54d716879f51e101abd79eb67b4993b1 276 PANTHER PTHR34606 29 221 3.1E-45 T 23-04-2016 RR42_RS19725 54d716879f51e101abd79eb67b4993b1 276 Pfam PF04972 BON domain 145 209 3.2E-12 T 23-04-2016 IPR007055 BON domain RR42_RS19725 54d716879f51e101abd79eb67b4993b1 276 Pfam PF04972 BON domain 82 134 2.2E-9 T 23-04-2016 IPR007055 BON domain RR42_RS16325 d60e86256134a98f55b7eacff32f778e 122 Pfam PF07363 Protein of unknown function (DUF1484) 19 122 2.8E-20 T 23-04-2016 IPR009957 Protein of unknown function DUF1484 RR42_RS08890 13d286545c2020f621525417f668ff34 173 Pfam PF01814 Hemerythrin HHE cation binding domain 14 148 1.8E-18 T 23-04-2016 IPR012312 Haemerythrin-like RR42_RS08890 13d286545c2020f621525417f668ff34 173 Gene3D G3DSA:1.20.120.520 4 169 2.6E-38 T 23-04-2016 RR42_RS13100 c4947ae34195401c8e803a1345b800fc 302 PANTHER PTHR10264:SF80 1 296 1.9E-75 T 23-04-2016 RR42_RS13100 c4947ae34195401c8e803a1345b800fc 302 TIGRFAM TIGR01932 hflC: HflC protein 141 284 9.8E-48 T 23-04-2016 IPR010200 HflC GO:0016021|GO:0052547 RR42_RS13100 c4947ae34195401c8e803a1345b800fc 302 Pfam PF01145 SPFH domain / Band 7 family 24 199 5.2E-32 T 23-04-2016 IPR001107 Band 7 domain RR42_RS13100 c4947ae34195401c8e803a1345b800fc 302 PANTHER PTHR10264 1 296 1.9E-75 T 23-04-2016 IPR001972 Stomatin family GO:0016020 RR42_RS13100 c4947ae34195401c8e803a1345b800fc 302 PIRSF PIRSF005651 1 294 2.3E-90 T 23-04-2016 IPR010200 HflC GO:0016021|GO:0052547 RR42_RS13100 c4947ae34195401c8e803a1345b800fc 302 SMART SM00244 20 185 1.0E-27 T 23-04-2016 IPR001107 Band 7 domain RR42_RS13100 c4947ae34195401c8e803a1345b800fc 302 SUPERFAMILY SSF117892 54 191 5.49E-28 T 23-04-2016 IPR001107 Band 7 domain RR42_RS00660 7e7194b07f9f290ae095798069b6e32a 316 Pfam PF06166 Protein of unknown function (DUF979) 6 316 4.5E-130 T 23-04-2016 IPR009323 Protein of unknown function DUF979 RR42_RS18370 72ff80868e8cf3573b540f784b9b45e1 422 PANTHER PTHR30629:SF3 80 406 7.1E-94 T 23-04-2016 RR42_RS18370 72ff80868e8cf3573b540f784b9b45e1 422 PANTHER PTHR30629:SF3 2 61 7.1E-94 T 23-04-2016 RR42_RS18370 72ff80868e8cf3573b540f784b9b45e1 422 Gene3D G3DSA:1.10.443.10 224 396 5.6E-27 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RR42_RS18370 72ff80868e8cf3573b540f784b9b45e1 422 PANTHER PTHR30629 80 406 7.1E-94 T 23-04-2016 RR42_RS18370 72ff80868e8cf3573b540f784b9b45e1 422 PANTHER PTHR30629 2 61 7.1E-94 T 23-04-2016 RR42_RS18370 72ff80868e8cf3573b540f784b9b45e1 422 Pfam PF13356 Domain of unknown function (DUF4102) 2 107 3.6E-17 T 23-04-2016 IPR025166 Domain of unknown function DUF4102 RR42_RS18370 72ff80868e8cf3573b540f784b9b45e1 422 SUPERFAMILY SSF56349 120 399 2.88E-56 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RR42_RS18370 72ff80868e8cf3573b540f784b9b45e1 422 Pfam PF00589 Phage integrase family 226 389 1.9E-26 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RR42_RS18370 72ff80868e8cf3573b540f784b9b45e1 422 Gene3D G3DSA:1.10.150.130 120 215 9.8E-12 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal RR42_RS19030 704f86bd8cc71b67fca767f9dcf561d9 214 Pfam PF05137 Fimbrial assembly protein (PilN) 105 185 3.9E-20 T 23-04-2016 IPR007813 Fimbrial assembly PilN RR42_RS19030 704f86bd8cc71b67fca767f9dcf561d9 214 PANTHER PTHR40278 9 200 1.5E-32 T 23-04-2016 RR42_RS19030 704f86bd8cc71b67fca767f9dcf561d9 214 PANTHER PTHR40278:SF1 9 200 1.5E-32 T 23-04-2016 RR42_RS16885 1059fa0e36c00dbcfb562fb4f2bb365d 1071 Pfam PF05567 Neisseria PilC beta-propeller domain 583 823 5.1E-15 T 23-04-2016 IPR008707 PilC beta-propeller domain RR42_RS05275 a91ce5284ffba3ad6094af357a54f961 401 Pfam PF06181 Protein of unknown function (DUF989) 4 298 4.4E-139 T 23-04-2016 IPR010389 Domain of unknown function DUF989 RR42_RS05275 a91ce5284ffba3ad6094af357a54f961 401 SUPERFAMILY SSF46626 296 397 1.02E-5 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS05275 a91ce5284ffba3ad6094af357a54f961 401 Gene3D G3DSA:1.10.760.10 323 390 1.8E-4 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS03260 a2909ebd5acfb17baf83f8b0c5586126 372 PANTHER PTHR30483 1 371 6.2E-132 T 23-04-2016 RR42_RS03260 a2909ebd5acfb17baf83f8b0c5586126 372 Pfam PF13458 Periplasmic binding protein 17 352 5.8E-44 T 23-04-2016 IPR028081 Leucine-binding protein domain RR42_RS03260 a2909ebd5acfb17baf83f8b0c5586126 372 PANTHER PTHR30483:SF7 1 371 6.2E-132 T 23-04-2016 RR42_RS03260 a2909ebd5acfb17baf83f8b0c5586126 372 SUPERFAMILY SSF53822 17 371 6.02E-63 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RR42_RS03260 a2909ebd5acfb17baf83f8b0c5586126 372 Gene3D G3DSA:3.40.50.2300 17 207 3.7E-38 T 23-04-2016 RR42_RS08135 5a4e5267917016f02fc50ad77cd712ec 206 Pfam PF09851 Short C-terminal domain 177 201 4.0E-7 T 23-04-2016 IPR018649 SHOCT domain RR42_RS08135 5a4e5267917016f02fc50ad77cd712ec 206 Pfam PF14470 Bacterial PH domain 26 94 1.5E-5 T 23-04-2016 RR42_RS20615 4d313ea74dbad8818afc0bd893854384 157 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 7 150 6.7E-23 T 23-04-2016 IPR009936 Protein of unknown function DUF1468 RR42_RS19720 d939ff75db9ce6f6830fb31ff3491b83 112 SUPERFAMILY SSF46626 21 109 5.89E-18 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS19720 d939ff75db9ce6f6830fb31ff3491b83 112 Gene3D G3DSA:1.10.760.10 20 110 2.5E-23 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS19720 d939ff75db9ce6f6830fb31ff3491b83 112 PANTHER PTHR33751 14 112 1.5E-12 T 23-04-2016 RR42_RS19720 d939ff75db9ce6f6830fb31ff3491b83 112 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 37 107 4.3E-8 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RR42_RS19720 d939ff75db9ce6f6830fb31ff3491b83 112 PANTHER PTHR33751:SF3 14 112 1.5E-12 T 23-04-2016 RR42_RS17785 8dd24c71ede457ed7b5098b0330c3944 130 SUPERFAMILY SSF55331 2 125 1.22E-21 T 23-04-2016 IPR014347 Tautomerase/MIF superfamily RR42_RS17785 8dd24c71ede457ed7b5098b0330c3944 130 Pfam PF01361 Tautomerase enzyme 2 60 3.6E-6 T 23-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 RR42_RS17785 8dd24c71ede457ed7b5098b0330c3944 130 Gene3D G3DSA:3.30.429.20 1 60 6.2E-11 T 23-04-2016 RR42_RS11730 bf45281c4d0e71ca4fbf3408cb77f81b 155 Pfam PF12728 Helix-turn-helix domain 84 132 4.0E-10 T 23-04-2016 RR42_RS11730 bf45281c4d0e71ca4fbf3408cb77f81b 155 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 84 131 3.7E-18 T 23-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 RR42_RS20810 720579426d27038f4ca9ba7c6a8b0632 256 SMART SM00880 23 256 4.5E-18 T 23-04-2016 IPR007899 CHAD domain RR42_RS20810 720579426d27038f4ca9ba7c6a8b0632 256 Pfam PF05235 CHAD domain 31 252 3.9E-32 T 23-04-2016 IPR007899 CHAD domain RR42_RS20810 720579426d27038f4ca9ba7c6a8b0632 256 PANTHER PTHR39339 1 255 3.6E-13 T 23-04-2016 RR42_RS20810 720579426d27038f4ca9ba7c6a8b0632 256 PANTHER PTHR39339:SF1 1 255 3.6E-13 T 23-04-2016 RR42_RS20220 bf20f7315476fc70612d265fe491e025 286 Pfam PF05013 N-formylglutamate amidohydrolase 19 251 1.9E-61 T 23-04-2016 IPR007709 N-formylglutamate amidohydrolase RR42_RS20220 bf20f7315476fc70612d265fe491e025 286 SUPERFAMILY SSF53187 7 280 2.67E-83 T 23-04-2016 RR42_RS20220 bf20f7315476fc70612d265fe491e025 286 Gene3D G3DSA:3.40.630.40 3 281 3.0E-96 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RR42_RS00045 45586d37ee555a236979569e4b8ddcee 930 Gene3D G3DSA:3.40.50.150 477 613 1.7E-16 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS00045 45586d37ee555a236979569e4b8ddcee 930 Gene3D G3DSA:3.40.50.150 344 444 1.7E-16 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS00045 45586d37ee555a236979569e4b8ddcee 930 PANTHER PTHR33841 19 912 5.7E-107 T 23-04-2016 RR42_RS00045 45586d37ee555a236979569e4b8ddcee 930 SUPERFAMILY SSF53335 167 449 9.86E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS00045 45586d37ee555a236979569e4b8ddcee 930 SUPERFAMILY SSF53335 482 600 9.86E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS00045 45586d37ee555a236979569e4b8ddcee 930 PANTHER PTHR33841:SF3 19 912 5.7E-107 T 23-04-2016 RR42_RS10455 c53ca8ea3c20fe5176404a2971730075 408 PANTHER PTHR30349:SF20 64 107 4.2E-24 T 23-04-2016 RR42_RS10455 c53ca8ea3c20fe5176404a2971730075 408 PANTHER PTHR30349:SF20 134 327 4.2E-24 T 23-04-2016 RR42_RS10455 c53ca8ea3c20fe5176404a2971730075 408 PANTHER PTHR30349:SF20 346 398 4.2E-24 T 23-04-2016 RR42_RS10455 c53ca8ea3c20fe5176404a2971730075 408 SUPERFAMILY SSF56349 133 395 1.15E-31 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RR42_RS10455 c53ca8ea3c20fe5176404a2971730075 408 SUPERFAMILY SSF56349 54 106 1.15E-31 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RR42_RS10455 c53ca8ea3c20fe5176404a2971730075 408 Gene3D G3DSA:1.10.443.10 205 395 2.5E-29 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RR42_RS10455 c53ca8ea3c20fe5176404a2971730075 408 Gene3D G3DSA:1.10.150.130 63 165 8.5E-10 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal RR42_RS10455 c53ca8ea3c20fe5176404a2971730075 408 PANTHER PTHR30349 64 107 4.2E-24 T 23-04-2016 RR42_RS10455 c53ca8ea3c20fe5176404a2971730075 408 PANTHER PTHR30349 134 327 4.2E-24 T 23-04-2016 RR42_RS10455 c53ca8ea3c20fe5176404a2971730075 408 PANTHER PTHR30349 346 398 4.2E-24 T 23-04-2016 RR42_RS10455 c53ca8ea3c20fe5176404a2971730075 408 Pfam PF00589 Phage integrase family 211 388 9.0E-17 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RR42_RS13000 67c00b10cac79f9d659c0dd4278fe0b0 154 Gene3D G3DSA:3.40.250.10 21 152 1.4E-34 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS13000 67c00b10cac79f9d659c0dd4278fe0b0 154 SUPERFAMILY SSF52821 16 151 7.27E-16 T 23-04-2016 IPR001763 Rhodanese-like domain RR42_RS11150 429a7043f0f7214f1685c23b59a28ef9 412 SUPERFAMILY SSF53822 25 379 2.88E-66 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RR42_RS11150 429a7043f0f7214f1685c23b59a28ef9 412 Gene3D G3DSA:3.40.50.2300 156 309 2.7E-25 T 23-04-2016 RR42_RS11150 429a7043f0f7214f1685c23b59a28ef9 412 Pfam PF13458 Periplasmic binding protein 26 376 1.9E-65 T 23-04-2016 IPR028081 Leucine-binding protein domain RR42_RS11150 429a7043f0f7214f1685c23b59a28ef9 412 Gene3D G3DSA:3.40.50.2300 22 155 2.4E-26 T 23-04-2016 RR42_RS11150 429a7043f0f7214f1685c23b59a28ef9 412 Gene3D G3DSA:3.40.50.2300 310 361 2.4E-26 T 23-04-2016 RR42_RS11150 429a7043f0f7214f1685c23b59a28ef9 412 PANTHER PTHR30483 1 411 1.3E-45 T 23-04-2016 RR42_RS06150 bbbfabfb6f405b9dc527149769b99880 267 SUPERFAMILY SSF56235 1 234 4.02E-26 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RR42_RS06150 bbbfabfb6f405b9dc527149769b99880 267 Gene3D G3DSA:3.60.20.10 3 209 1.8E-9 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RR42_RS06150 bbbfabfb6f405b9dc527149769b99880 267 PIRSF PIRSF009120 1 242 3.5E-108 T 23-04-2016 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 RR42_RS01660 b2b9bbddfb126c92618a6b68b842105e 150 Pfam PF04304 Protein of unknown function (DUF454) 17 132 1.2E-39 T 23-04-2016 IPR007401 Protein of unknown function DUF454 RR42_RS01660 b2b9bbddfb126c92618a6b68b842105e 150 PANTHER PTHR35813:SF1 4 140 3.0E-43 T 23-04-2016 RR42_RS01660 b2b9bbddfb126c92618a6b68b842105e 150 PANTHER PTHR35813 4 140 3.0E-43 T 23-04-2016 RR42_RS07750 a95deab9412c97a2cd1fcd8d6243c359 155 Pfam PF10029 Predicted periplasmic protein (DUF2271) 23 149 1.1E-36 T 23-04-2016 IPR014469 Protein of unknown function DUF2271 RR42_RS16700 e41d7970ff47d4e18eab31acb3bf1a8f 232 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 222 1.8E-46 T 23-04-2016 IPR018648 Protein of unknown function DUF2076 RR42_RS16875 491bd0dbf092bfe713d165a64be96be4 337 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS16875 491bd0dbf092bfe713d165a64be96be4 337 Pfam PF16074 Type IV Pilus-assembly protein W 190 331 2.2E-28 T 23-04-2016 IPR032092 Type IV Pilus-assembly protein W GO:0043683 RR42_RS16875 491bd0dbf092bfe713d165a64be96be4 337 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 2 27 1.2E-6 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS16875 491bd0dbf092bfe713d165a64be96be4 337 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 0.0011 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS02760 6366401f1f7cf046a11c612dcdc5148f 250 Pfam PF03591 AzlC protein 26 169 2.0E-42 T 23-04-2016 IPR011606 Branched-chain amino acid transport, permease RR42_RS02760 6366401f1f7cf046a11c612dcdc5148f 250 PANTHER PTHR34979 1 245 9.3E-42 T 23-04-2016 RR42_RS02695 02cb7077c17145a7f4f5151de2927d40 194 Pfam PF04366 Las17-binding protein actin regulator 107 190 5.7E-11 T 23-04-2016 IPR007461 Ysc84 actin-binding domain RR42_RS09085 1dfac16bb453cabfbaac19f44e6d6d89 183 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 29 160 2.0E-21 T 23-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RR42_RS04970 c190dbe82f8ab9905811e930e6c33c8e 300 PANTHER PTHR12366:SF25 13 244 3.7E-139 T 23-04-2016 RR42_RS04970 c190dbe82f8ab9905811e930e6c33c8e 300 Gene3D G3DSA:2.60.120.330 126 223 1.2E-16 T 23-04-2016 IPR027443 Isopenicillin N synthase-like RR42_RS04970 c190dbe82f8ab9905811e930e6c33c8e 300 SUPERFAMILY SSF51197 105 223 2.09E-17 T 23-04-2016 RR42_RS04970 c190dbe82f8ab9905811e930e6c33c8e 300 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 70 223 8.4E-48 T 23-04-2016 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 RR42_RS04970 c190dbe82f8ab9905811e930e6c33c8e 300 PANTHER PTHR12366 13 244 3.7E-139 T 23-04-2016 RR42_RS14565 ddedd6035eb178a3557f5ab5cfb0311c 230 SUPERFAMILY SSF54593 2 112 3.38E-5 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RR42_RS14565 ddedd6035eb178a3557f5ab5cfb0311c 230 Pfam PF13468 Glyoxalase-like domain 5 201 2.5E-45 T 23-04-2016 IPR025870 Glyoxalase-like domain RR42_RS05555 a3447fe395645d1aa9017ae7e6239d6a 216 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 18 165 7.7E-38 T 23-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 RR42_RS05555 a3447fe395645d1aa9017ae7e6239d6a 216 PANTHER PTHR33269:SF1 1 196 1.3E-63 T 23-04-2016 RR42_RS05555 a3447fe395645d1aa9017ae7e6239d6a 216 PANTHER PTHR33269 1 196 1.3E-63 T 23-04-2016 RR42_RS08630 9591af1858dc80cbae3527bd1f8b223a 155 Pfam PF05926 Phage head completion protein (GPL) 17 155 1.8E-51 T 23-04-2016 IPR009225 Bacteriophage head completion protein GpL GO:0019069 RR42_RS37585 9627a4d95ecc231e7d1d1f066665462d 79 Gene3D G3DSA:1.20.1250.20 2 66 1.1E-8 T 23-04-2016 RR42_RS37585 9627a4d95ecc231e7d1d1f066665462d 79 SUPERFAMILY SSF103473 2 78 1.24E-8 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS16880 1e382a63041d2f552224c3cdb9c54f5d 180 Pfam PF14341 PilX N-terminal 9 59 6.8E-9 T 23-04-2016 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain RR42_RS19510 b4508f9dd9f34fe8b5b0e887164114e6 205 Pfam PF04612 Type II secretion system (T2SS), protein M 40 196 7.2E-47 T 23-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 RR42_RS19510 b4508f9dd9f34fe8b5b0e887164114e6 205 SUPERFAMILY SSF103054 120 196 2.62E-17 T 23-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain RR42_RS19510 b4508f9dd9f34fe8b5b0e887164114e6 205 Gene3D G3DSA:3.30.1360.100 120 196 1.0E-16 T 23-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain RR42_RS01190 e4023000ad74a3630c7e08cf2bf84c12 332 PANTHER PTHR22726 62 300 6.9E-65 T 23-04-2016 RR42_RS01190 e4023000ad74a3630c7e08cf2bf84c12 332 Gene3D G3DSA:3.30.2010.10 118 183 1.7E-16 T 23-04-2016 RR42_RS01190 e4023000ad74a3630c7e08cf2bf84c12 332 Pfam PF01435 Peptidase family M48 122 284 1.1E-34 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RR42_RS09350 458bdb91a428e0cac64ce9b216e23031 191 Pfam PF01814 Hemerythrin HHE cation binding domain 8 142 4.8E-10 T 23-04-2016 IPR012312 Haemerythrin-like RR42_RS09350 458bdb91a428e0cac64ce9b216e23031 191 Gene3D G3DSA:1.20.120.520 3 158 8.4E-17 T 23-04-2016 RR42_RS19645 e53e805a17f5cce68fd2a653d874b22e 111 SUPERFAMILY SSF57783 72 101 1.05E-5 T 23-04-2016 RR42_RS19645 e53e805a17f5cce68fd2a653d874b22e 111 Gene3D G3DSA:3.30.65.10 75 101 3.7E-6 T 23-04-2016 RR42_RS19645 e53e805a17f5cce68fd2a653d874b22e 111 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 75 99 3.3E-7 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 RR42_RS09565 d1852152f58c63716090932c74f2b437 176 SUPERFAMILY SSF52218 1 126 1.03E-12 T 23-04-2016 IPR029039 Flavoprotein-like domain RR42_RS09565 d1852152f58c63716090932c74f2b437 176 Gene3D G3DSA:3.40.50.360 1 115 1.9E-9 T 23-04-2016 IPR029039 Flavoprotein-like domain RR42_RS25990 4cde6087a85b07c93608410778b121f1 200 PANTHER PTHR19353 18 116 1.2E-13 T 23-04-2016 RR42_RS25990 4cde6087a85b07c93608410778b121f1 200 PANTHER PTHR19353:SF27 18 116 1.2E-13 T 23-04-2016 RR42_RS25990 4cde6087a85b07c93608410778b121f1 200 Pfam PF00487 Fatty acid desaturase 16 197 6.3E-23 T 23-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 RR42_RS20050 2a37426d722030b145441b4b68bd5f6c 133 SUPERFAMILY SSF49482 2 77 3.53E-13 T 23-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 RR42_RS20050 2a37426d722030b145441b4b68bd5f6c 133 Gene3D G3DSA:2.60.130.10 2 80 6.5E-12 T 23-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 RR42_RS03470 e67ef5aa5f212bdc0a9fd63e10c97e06 206 PANTHER PTHR30625 1 201 1.1E-48 T 23-04-2016 RR42_RS03470 e67ef5aa5f212bdc0a9fd63e10c97e06 206 Pfam PF01618 MotA/TolQ/ExbB proton channel family 66 190 8.0E-35 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RR42_RS03955 f93041c4c6007aa4e9dcb168fc0a6aec 299 PANTHER PTHR12737 7 286 8.2E-62 T 23-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 RR42_RS03955 f93041c4c6007aa4e9dcb168fc0a6aec 299 PANTHER PTHR12737:SF20 7 286 8.2E-62 T 23-04-2016 RR42_RS03955 f93041c4c6007aa4e9dcb168fc0a6aec 299 Pfam PF02274 Amidinotransferase 39 279 1.4E-22 T 23-04-2016 RR42_RS03955 f93041c4c6007aa4e9dcb168fc0a6aec 299 Gene3D G3DSA:3.75.10.10 6 279 2.5E-47 T 23-04-2016 RR42_RS03955 f93041c4c6007aa4e9dcb168fc0a6aec 299 SUPERFAMILY SSF55909 1 282 4.12E-57 T 23-04-2016 RR42_RS01365 33ccef02e06c96bcd31c2b73b5505d7f 146 Pfam PF14083 PGDYG protein 40 140 3.7E-49 T 23-04-2016 IPR025688 PGDYG protein RR42_RS06225 bf0a25587b89782bff4bcb26567c4fb3 281 PANTHER PTHR30007 1 281 4.8E-62 T 23-04-2016 RR42_RS06225 bf0a25587b89782bff4bcb26567c4fb3 281 Gene3D G3DSA:3.20.20.140 162 259 9.7E-38 T 23-04-2016 RR42_RS06225 bf0a25587b89782bff4bcb26567c4fb3 281 Gene3D G3DSA:3.20.20.140 7 92 9.7E-38 T 23-04-2016 RR42_RS06225 bf0a25587b89782bff4bcb26567c4fb3 281 SMART SM00481 9 74 2.3E-14 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 RR42_RS06225 bf0a25587b89782bff4bcb26567c4fb3 281 PANTHER PTHR30007:SF4 1 281 4.8E-62 T 23-04-2016 RR42_RS06225 bf0a25587b89782bff4bcb26567c4fb3 281 Pfam PF02811 PHP domain 10 163 5.3E-7 T 23-04-2016 IPR004013 PHP domain GO:0003824 RR42_RS06225 bf0a25587b89782bff4bcb26567c4fb3 281 SUPERFAMILY SSF89550 170 281 1.51E-47 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 RR42_RS06225 bf0a25587b89782bff4bcb26567c4fb3 281 SUPERFAMILY SSF89550 7 87 1.51E-47 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 RR42_RS08790 c98180cd39ff052f3ec582060e5bfd25 149 PIRSF PIRSF037181 1 141 1.9E-51 T 23-04-2016 IPR014958 DGC RR42_RS08790 c98180cd39ff052f3ec582060e5bfd25 149 Pfam PF08859 DGC domain 11 116 1.5E-31 T 23-04-2016 IPR014958 DGC RR42_RS13500 746663a1720d31659dadda15a570e843 167 Pfam PF13664 Domain of unknown function (DUF4149) 19 118 4.0E-18 T 23-04-2016 IPR025423 Domain of unknown function DUF4149 RR42_RS08025 7edeaf2aa402ec30d48e9fe2cb27f78e 295 Pfam PF07505 Protein of unknown function (DUF5131) 4 291 1.4E-96 T 23-04-2016 IPR011101 Protein of unknown function DUF5131 RR42_RS02545 cba8ca4909126406c095279d63a5f886 287 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RR42_RS02545 cba8ca4909126406c095279d63a5f886 287 PANTHER PTHR24220:SF589 29 261 1.9E-82 T 23-04-2016 RR42_RS02545 cba8ca4909126406c095279d63a5f886 287 SMART SM00382 58 246 1.3E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain RR42_RS02545 cba8ca4909126406c095279d63a5f886 287 Gene3D G3DSA:3.40.50.300 26 249 7.5E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02545 cba8ca4909126406c095279d63a5f886 287 SUPERFAMILY SSF52540 28 264 3.96E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS02545 cba8ca4909126406c095279d63a5f886 287 PANTHER PTHR24220 29 261 1.9E-82 T 23-04-2016 RR42_RS02545 cba8ca4909126406c095279d63a5f886 287 Pfam PF00005 ABC transporter 50 195 4.1E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RR42_RS07430 5af867a0574187d30fd21fecffddb488 241 PANTHER PTHR30296 2 238 2.0E-89 T 23-04-2016 RR42_RS07430 5af867a0574187d30fd21fecffddb488 241 PANTHER PTHR30296:SF0 2 238 2.0E-89 T 23-04-2016 RR42_RS07430 5af867a0574187d30fd21fecffddb488 241 Pfam PF02754 Cysteine-rich domain 3 82 6.8E-13 T 23-04-2016 IPR004017 Cysteine-rich domain RR42_RS07430 5af867a0574187d30fd21fecffddb488 241 Pfam PF02754 Cysteine-rich domain 132 216 1.5E-13 T 23-04-2016 IPR004017 Cysteine-rich domain RR42_RS07040 6cf71e53c3b370a15c2504b9d86993b7 188 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 69 186 3.6E-7 T 23-04-2016 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly RR42_RS08625 1e8504549a9f629af1e8d21f9924a9ca 67 Pfam PF05489 Phage Tail Protein X 1 58 1.1E-28 T 23-04-2016 IPR008861 Phage Tail Protein X-like RR42_RS05235 0a02283d68cc2cf0351d26006bed5d75 221 Gene3D G3DSA:1.20.1250.20 39 209 5.7E-14 T 23-04-2016 RR42_RS05235 0a02283d68cc2cf0351d26006bed5d75 221 SUPERFAMILY SSF103473 4 210 1.96E-19 T 23-04-2016 IPR020846 Major facilitator superfamily domain RR42_RS06095 eede5ee325f0315372b55639bb3d0797 374 PIRSF PIRSF015283 1 363 2.5E-95 T 23-04-2016 IPR016631 Regulatory, RpfE RR42_RS05360 4c0dd95fa24bb900a427bdadeb8610b5 205 Pfam PF13548 Domain of unknown function (DUF4126) 6 176 6.0E-57 T 23-04-2016 IPR025196 Domain of unknown function DUF4126 RR42_RS18785 a17a66a3c467137757133fbc71f9cf11 126 Pfam PF01402 Ribbon-helix-helix protein, copG family 74 105 3.6E-5 T 23-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 RR42_RS05205 00193f5eab1d596934d3fab3f81f48c1 204 Pfam PF13590 Domain of unknown function (DUF4136) 36 187 5.9E-19 T 23-04-2016 IPR025411 Domain of unknown function DUF4136 RR42_RS20730 1d9e34f6e0946da5651f4f9d1f9803ea 290 PANTHER PTHR39456 20 273 2.9E-57 T 23-04-2016 RR42_RS20730 1d9e34f6e0946da5651f4f9d1f9803ea 290 Pfam PF10118 Predicted metal-dependent hydrolase 6 255 4.2E-80 T 23-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 RR42_RS20730 1d9e34f6e0946da5651f4f9d1f9803ea 290 PANTHER PTHR39456:SF2 20 273 2.9E-57 T 23-04-2016 RR42_RS20730 1d9e34f6e0946da5651f4f9d1f9803ea 290 PIRSF PIRSF007580 1 276 1.9E-65 T 23-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 RR42_RS00705 f98ed108b5b29ade2262e2859f60832b 242 Gene3D G3DSA:3.30.70.1070 167 236 6.0E-5 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 RR42_RS00705 f98ed108b5b29ade2262e2859f60832b 242 Pfam PF05036 Sporulation related domain 130 201 2.9E-7 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 RR42_RS02420 28fbeb3427ef708a589488079fd63a77 220 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 33 217 2.2E-37 T 23-04-2016 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67 RR42_RS02420 28fbeb3427ef708a589488079fd63a77 220 SUPERFAMILY SSF53335 32 218 2.29E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS02420 28fbeb3427ef708a589488079fd63a77 220 PANTHER PTHR32183:SF6 37 218 1.0E-14 T 23-04-2016 RR42_RS02420 28fbeb3427ef708a589488079fd63a77 220 Gene3D G3DSA:3.40.50.150 47 219 2.1E-40 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RR42_RS02420 28fbeb3427ef708a589488079fd63a77 220 PANTHER PTHR32183 37 218 1.0E-14 T 23-04-2016 RR42_RS02985 7871093209cf20fc98a02efe35525945 195 Pfam PF14113 Type VI secretion system (T6SS), amidase effector protein 4 52 192 6.7E-29 T 23-04-2016 IPR025562 Type VI secretion system (T6SS), amidase effector protein 4 RR42_RS00965 a6006a3556f05e737a268d25d8033d2f 89 Pfam PF06945 Protein of unknown function (DUF1289) 26 72 2.9E-19 T 23-04-2016 IPR010710 Protein of unknown function DUF1289 RR42_RS00965 a6006a3556f05e737a268d25d8033d2f 89 PANTHER PTHR35175 1 79 2.1E-17 T 23-04-2016 RR42_RS37805 86ef6399d5ecead3248720e7abea637d 337 Gene3D G3DSA:3.40.390.10 135 325 3.5E-22 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RR42_RS37805 86ef6399d5ecead3248720e7abea637d 337 SMART SM01351 163 323 5.8E-12 T 23-04-2016 IPR029463 Lysine-specific metallo-endopeptidase GO:0004222 RR42_RS37805 86ef6399d5ecead3248720e7abea637d 337 SUPERFAMILY SSF55486 135 326 2.42E-8 T 23-04-2016 RR42_RS37805 86ef6399d5ecead3248720e7abea637d 337 Pfam PF14521 Lysine-specific metallo-endopeptidase 167 321 2.5E-9 T 23-04-2016 IPR029463 Lysine-specific metallo-endopeptidase GO:0004222 RR42_RS09515 2879d4c4e34e218fa60d4d6772a54cd0 97 Gene3D G3DSA:1.10.238.10 37 91 3.3E-4 T 23-04-2016 IPR011992 EF-hand domain pair RR42_RS09515 2879d4c4e34e218fa60d4d6772a54cd0 97 SUPERFAMILY SSF47473 35 93 4.86E-5 T 23-04-2016 IPR011992 EF-hand domain pair RR42_RS04305 c88a52b4048a30f9aa2fe6793cb99945 213 Pfam PF03458 UPF0126 domain 18 89 2.3E-18 T 23-04-2016 IPR005115 Uncharacterised domain UPF0126 RR42_RS04305 c88a52b4048a30f9aa2fe6793cb99945 213 Pfam PF03458 UPF0126 domain 107 179 1.6E-19 T 23-04-2016 IPR005115 Uncharacterised domain UPF0126 RR42_RS04305 c88a52b4048a30f9aa2fe6793cb99945 213 PANTHER PTHR30506 10 212 2.4E-60 T 23-04-2016 RR42_RS25040 c6190bb6c4c5e8df01b77ddc21f56764 378 PANTHER PTHR31384 103 373 2.9E-56 T 23-04-2016 RR42_RS25040 c6190bb6c4c5e8df01b77ddc21f56764 378 SUPERFAMILY SSF55729 237 377 1.16E-29 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS25040 c6190bb6c4c5e8df01b77ddc21f56764 378 Gene3D G3DSA:3.40.630.30 236 378 8.4E-24 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RR42_RS25040 c6190bb6c4c5e8df01b77ddc21f56764 378 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 64 377 3.5E-126 T 23-04-2016 IPR007434 Peptidogalycan biosysnthesis/recognition RR42_RS19515 70258660d38517a8f164b60090ac221a 279 Pfam PF01203 Type II secretion system (T2SS), protein N 57 273 2.9E-31 T 23-04-2016 IPR022792 Type II secretion system, protein N RR42_RS00980 06b2f32db3a299ea1d27871324ca5b27 198 Pfam PF09424 Yqey-like protein 134 189 2.8E-5 T 23-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial RR42_RS00980 06b2f32db3a299ea1d27871324ca5b27 198 Gene3D G3DSA:1.10.10.410 135 189 1.3E-8 T 23-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RR42_RS17130 463a74343686356407e74e7c1b59bf42 160 Pfam PF05488 PAAR motif 8 82 1.3E-5 T 23-04-2016 IPR008727 PAAR motif RR42_RS19965 5223ff064c6f6c83149495e66e52f979 374 Gene3D G3DSA:2.40.160.10 23 374 8.0E-63 T 23-04-2016 IPR023614 Porin domain RR42_RS19965 5223ff064c6f6c83149495e66e52f979 374 Pfam PF13609 Gram-negative porin 9 346 6.9E-38 T 23-04-2016 RR42_RS19965 5223ff064c6f6c83149495e66e52f979 374 SUPERFAMILY SSF56935 23 374 1.1E-51 T 23-04-2016 RR42_RS04680 a17ea94d01224a61b9445c9a32f37b29 404 PANTHER PTHR32468 2 404 8.6E-76 T 23-04-2016 RR42_RS04680 a17ea94d01224a61b9445c9a32f37b29 404 Pfam PF00999 Sodium/hydrogen exchanger family 13 394 6.4E-35 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RR42_RS08620 957fe9584e4e171b25d90f0eeac47bee 129 Pfam PF16931 Putative phage holin 1 123 5.9E-34 T 23-04-2016 IPR032637 Putative phage holin-like RR42_RS13380 54d25a3dee703eaf10108ac81dbd9492 350 PANTHER PTHR30465:SF66 1 345 9.3E-176 T 23-04-2016 RR42_RS13380 54d25a3dee703eaf10108ac81dbd9492 350 SUPERFAMILY SSF161098 116 327 2.49E-13 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS13380 54d25a3dee703eaf10108ac81dbd9492 350 Gene3D G3DSA:1.10.3720.10 116 334 6.0E-15 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS13380 54d25a3dee703eaf10108ac81dbd9492 350 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 136 343 3.3E-36 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RR42_RS13380 54d25a3dee703eaf10108ac81dbd9492 350 PANTHER PTHR30465 1 345 9.3E-176 T 23-04-2016 RR42_RS02170 dd2201b7779ef62dbcaff2112ba55431 256 PANTHER PTHR30269:SF14 15 253 1.7E-21 T 23-04-2016 RR42_RS02170 dd2201b7779ef62dbcaff2112ba55431 256 Pfam PF01925 Sulfite exporter TauE/SafE 22 245 2.8E-24 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RR42_RS02170 dd2201b7779ef62dbcaff2112ba55431 256 PANTHER PTHR30269 15 253 1.7E-21 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RR42_RS06295 0a61bea863e0b8a399616a8025a53ef3 655 Pfam PF13520 Amino acid permease 57 452 6.7E-12 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RR42_RS06295 0a61bea863e0b8a399616a8025a53ef3 655 PANTHER PTHR11785 36 503 3.7E-58 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RR42_RS06295 0a61bea863e0b8a399616a8025a53ef3 655 PANTHER PTHR11785:SF125 36 503 3.7E-58 T 23-04-2016 RR42_RS08745 bc135b11042ade48a3837e0db7227869 120 Pfam PF11750 Protein of unknown function (DUF3307) 5 115 8.3E-13 T 23-04-2016 IPR021737 Bacteriophage phiKZ, Orf197 RR42_RS00030 cf2d0808ed5279b654058326f6c59f3d 762 Pfam PF09823 Domain of unknown function (DUF2357) 94 342 2.0E-43 T 23-04-2016 IPR018633 Domain of unknown function DUF2357 RR42_RS00030 cf2d0808ed5279b654058326f6c59f3d 762 Pfam PF04411 PD-(D/E)XK nuclease superfamily 369 541 1.3E-33 T 23-04-2016 IPR007505 PD-(D/E)XK nuclease superfamily 7 RR42_RS14520 0a6df1bce3ead5486fc020b77a16f5ae 231 Gene3D G3DSA:3.40.50.300 2 143 4.4E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS14520 0a6df1bce3ead5486fc020b77a16f5ae 231 SUPERFAMILY SSF52540 4 173 6.54E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS03465 88d60e9d4cf698180f2f954184224c08 142 PANTHER PTHR30558:SF5 1 136 1.2E-27 T 23-04-2016 RR42_RS03465 88d60e9d4cf698180f2f954184224c08 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 137 1.2E-28 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RR42_RS03465 88d60e9d4cf698180f2f954184224c08 142 PANTHER PTHR30558 1 136 1.2E-27 T 23-04-2016 RR42_RS04665 4f4819531cd3bb4bf5a20f513b8061eb 417 PANTHER PTHR37422 87 406 9.7E-23 T 23-04-2016 RR42_RS04665 4f4819531cd3bb4bf5a20f513b8061eb 417 Pfam PF04932 O-Antigen ligase 179 332 6.0E-20 T 23-04-2016 IPR007016 O-antigen ligase-related RR42_RS04665 4f4819531cd3bb4bf5a20f513b8061eb 417 PANTHER PTHR37422:SF2 87 406 9.7E-23 T 23-04-2016 RR42_RS33360 7a427bbcff7201482fcca2e8ec7a444e 208 PANTHER PTHR30218 12 203 1.7E-106 T 23-04-2016 RR42_RS33360 7a427bbcff7201482fcca2e8ec7a444e 208 Gene3D G3DSA:3.30.870.10 11 65 2.5E-18 T 23-04-2016 RR42_RS33360 7a427bbcff7201482fcca2e8ec7a444e 208 Pfam PF13090 Polyphosphate kinase C-terminal domain 9 203 7.3E-87 T 23-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 RR42_RS33360 7a427bbcff7201482fcca2e8ec7a444e 208 PANTHER PTHR30218:SF0 12 203 1.7E-106 T 23-04-2016 RR42_RS33360 7a427bbcff7201482fcca2e8ec7a444e 208 SUPERFAMILY SSF56024 12 58 4.71E-11 T 23-04-2016 RR42_RS33360 7a427bbcff7201482fcca2e8ec7a444e 208 Gene3D G3DSA:3.30.870.10 66 204 5.7E-63 T 23-04-2016 RR42_RS33360 7a427bbcff7201482fcca2e8ec7a444e 208 SUPERFAMILY SSF56024 66 203 1.02E-61 T 23-04-2016 RR42_RS17790 4760d8332ae2056d4e7fc2c445f22f8b 463 PANTHER PTHR30354:SF7 1 463 4.4E-232 T 23-04-2016 RR42_RS17790 4760d8332ae2056d4e7fc2c445f22f8b 463 PANTHER PTHR30354 1 463 4.4E-232 T 23-04-2016 RR42_RS05825 a19d762cfe63971edf455666e3edd313 461 Pfam PF08811 Protein of unknown function (DUF1800) 12 460 1.1E-136 T 23-04-2016 IPR014917 Protein of unknown function DUF1800 RR42_RS25710 f39a397598f327da22ea8c97c6929063 129 Pfam PF03961 Protein of unknown function (DUF342) 25 126 8.2E-15 T 23-04-2016 IPR005646 Protein of unknown function DUF342 RR42_RS02680 6ce39bc8b8f298229d391975e600435d 219 Gene3D G3DSA:3.90.280.10 1 213 1.6E-62 T 23-04-2016 IPR008914 Phosphatidylethanolamine-binding protein RR42_RS02680 6ce39bc8b8f298229d391975e600435d 219 Pfam PF01161 Phosphatidylethanolamine-binding protein 32 207 7.9E-37 T 23-04-2016 IPR008914 Phosphatidylethanolamine-binding protein RR42_RS02680 6ce39bc8b8f298229d391975e600435d 219 SUPERFAMILY SSF49777 1 210 7.85E-43 T 23-04-2016 IPR008914 Phosphatidylethanolamine-binding protein RR42_RS02680 6ce39bc8b8f298229d391975e600435d 219 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 80 206 4.5E-18 T 23-04-2016 IPR005247 YbhB/YbcL RR42_RS02680 6ce39bc8b8f298229d391975e600435d 219 PANTHER PTHR30289 1 215 1.7E-28 T 23-04-2016 RR42_RS16150 246da825b4e06c67e2e93995ec8821e0 113 PANTHER PTHR34981:SF1 2 99 1.7E-12 T 23-04-2016 RR42_RS16150 246da825b4e06c67e2e93995ec8821e0 113 PANTHER PTHR34981 2 99 1.7E-12 T 23-04-2016 RR42_RS16150 246da825b4e06c67e2e93995ec8821e0 113 Pfam PF05164 Cell division protein ZapA 6 93 6.3E-20 T 23-04-2016 IPR007838 Cell division protein ZapA-like RR42_RS16150 246da825b4e06c67e2e93995ec8821e0 113 SUPERFAMILY SSF102829 5 99 1.2E-18 T 23-04-2016 IPR007838 Cell division protein ZapA-like RR42_RS00820 e2f550af76462b1e4975778ce7d50947 107 Pfam PF08895 Domain of unknown function (DUF1840) 1 105 2.1E-30 T 23-04-2016 IPR014991 Protein of unknown function DUF1840 RR42_RS07680 91af16b4f37dbf647ebd3be1d3bbb35b 335 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 54 328 4.4E-41 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RR42_RS07680 91af16b4f37dbf647ebd3be1d3bbb35b 335 PANTHER PTHR30349:SF1 7 298 2.9E-41 T 23-04-2016 RR42_RS07680 91af16b4f37dbf647ebd3be1d3bbb35b 335 SUPERFAMILY SSF53850 108 292 3.55E-7 T 23-04-2016 RR42_RS07680 91af16b4f37dbf647ebd3be1d3bbb35b 335 PANTHER PTHR30349 7 298 2.9E-41 T 23-04-2016 RR42_RS10920 10fc3a92da24108b3d7cd81344d7ad33 96 Pfam PF16290 Domain of unknown function (DUF4936) 6 91 7.1E-29 T 23-04-2016 IPR032556 Protein of unknown function DUF4936 RR42_RS07350 2a6d2464f56c237d48c1fd94851b578c 230 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 16 218 2.9E-5 T 23-04-2016 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 UniPathway: UPA00148 RR42_RS18430 0ef3787828bcba68acceb4925439a3a5 89 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 53 3.2E-11 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RR42_RS18430 0ef3787828bcba68acceb4925439a3a5 89 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 4 61 1.3E-11 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RR42_RS18430 0ef3787828bcba68acceb4925439a3a5 89 SUPERFAMILY SSF143120 5 68 2.35E-10 T 23-04-2016 RR42_RS18430 0ef3787828bcba68acceb4925439a3a5 89 Gene3D G3DSA:3.40.1620.10 9 51 6.0E-5 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RR42_RS16660 a14e77dd7b15f696d063a15021f21220 406 Gene3D G3DSA:1.10.10.10 335 372 4.3E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS16660 a14e77dd7b15f696d063a15021f21220 406 SUPERFAMILY SSF46785 328 386 1.45E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RR42_RS19900 eed67e9655ad4ceba49a102f0af72181 146 Gene3D G3DSA:1.10.1660.10 55 133 5.8E-21 T 23-04-2016 RR42_RS19900 eed67e9655ad4ceba49a102f0af72181 146 SUPERFAMILY SSF46955 1 127 2.53E-33 T 23-04-2016 IPR009061 Putative DNA-binding domain RR42_RS19900 eed67e9655ad4ceba49a102f0af72181 146 PANTHER PTHR30204:SF18 1 112 2.5E-32 T 23-04-2016 RR42_RS19900 eed67e9655ad4ceba49a102f0af72181 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.09E-11 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RR42_RS19900 eed67e9655ad4ceba49a102f0af72181 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.09E-11 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RR42_RS19900 eed67e9655ad4ceba49a102f0af72181 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.09E-11 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RR42_RS19900 eed67e9655ad4ceba49a102f0af72181 146 Pfam PF13411 MerR HTH family regulatory protein 1 67 3.4E-18 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RR42_RS19900 eed67e9655ad4ceba49a102f0af72181 146 PANTHER PTHR30204 1 112 2.5E-32 T 23-04-2016 RR42_RS19900 eed67e9655ad4ceba49a102f0af72181 146 SMART SM00422 1 70 5.6E-24 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RR42_RS19900 eed67e9655ad4ceba49a102f0af72181 146 Gene3D G3DSA:1.10.1660.10 1 54 1.1E-23 T 23-04-2016 RR42_RS04175 afa51ec2b5be0ca09fa39f5996b2321f 115 Pfam PF04138 GtrA-like protein 2 114 3.6E-18 T 23-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 RR42_RS32090 a0e5c38d74218b3fd98b1b4714abd729 72 Pfam PF08907 Domain of unknown function (DUF1853) 4 69 3.4E-8 T 23-04-2016 IPR015003 Protein of unknown function DUF1853 RR42_RS08535 05cc32995ba913a28f507c4e5416d7e8 384 SUPERFAMILY SSF69279 20 193 2.07E-26 T 23-04-2016 RR42_RS08535 05cc32995ba913a28f507c4e5416d7e8 384 Pfam PF05954 Phage late control gene D protein (GPD) 72 356 4.9E-29 T 23-04-2016 RR42_RS05420 7592e2337f2bc987e4026a1fe82f879d 259 Pfam PF11304 Protein of unknown function (DUF3106) 59 158 3.2E-33 T 23-04-2016 IPR021455 Protein of unknown function DUF3106 RR42_RS09780 0e64261a5716c081f05414739979aaa9 76 Pfam PF11127 Protein of unknown function (DUF2892) 6 49 1.3E-10 T 23-04-2016 IPR021309 Protein of unknown function DUF2892 RR42_RS08550 7e91e1326ac65299a507a576a99adc8b 109 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 9 87 6.0E-15 T 23-04-2016 IPR019289 Bacteriophage tail protein Gp41, putative RR42_RS04105 0260435306508030bd10a9cfeac7072b 397 SUPERFAMILY SSF52172 1 128 3.42E-10 T 23-04-2016 IPR011006 CheY-like superfamily RR42_RS04105 0260435306508030bd10a9cfeac7072b 397 PANTHER PTHR13696 70 381 3.3E-33 T 23-04-2016 RR42_RS04105 0260435306508030bd10a9cfeac7072b 397 Pfam PF00072 Response regulator receiver domain 49 116 2.7E-5 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RR42_RS04105 0260435306508030bd10a9cfeac7072b 397 SUPERFAMILY SSF52540 130 369 8.18E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04105 0260435306508030bd10a9cfeac7072b 397 Gene3D G3DSA:3.40.50.300 129 365 1.1E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RR42_RS04105 0260435306508030bd10a9cfeac7072b 397 Pfam PF13614 AAA domain 132 295 6.0E-14 T 23-04-2016 IPR025669 AAA domain RR42_RS04105 0260435306508030bd10a9cfeac7072b 397 Gene3D G3DSA:3.40.50.2300 49 120 4.0E-8 T 23-04-2016 RR42_RS00305 d63ca49a9afef3ce8319829d7993fce5 401 Pfam PF11017 Protein of unknown function (DUF2855) 62 374 2.9E-101 T 23-04-2016 IPR021276 Protein of unknown function DUF2855 RR42_RS08155 810a1081ff00d2a33dfdb84b8be59f96 99 Pfam PF14359 Domain of unknown function (DUF4406) 3 93 1.4E-30 T 23-04-2016 IPR025518 Protein of unknown function DUF4406 RR42_RS08155 810a1081ff00d2a33dfdb84b8be59f96 99 Gene3D G3DSA:3.40.50.10400 2 98 9.3E-13 T 23-04-2016 IPR027269 Hypothetical PA1492 domain RR42_RS08155 810a1081ff00d2a33dfdb84b8be59f96 99 SUPERFAMILY SSF52309 1 97 1.35E-27 T 23-04-2016 RR42_RS11725 7b290179b03a17934bf2573c4e6caa84 191 Pfam PF13470 PIN domain 9 114 3.2E-12 T 23-04-2016 IPR002716 PIN domain RR42_RS16005 3c18be8df96faf10bebea122dbfee022 190 Pfam PF11749 Protein of unknown function (DUF3305) 26 177 5.3E-55 T 23-04-2016 IPR021736 Protein of unknown function DUF3305 RR42_RS20395 d01c2b74ad223fbcbf925d2ee7d50e10 322 Pfam PF10030 Uncharacterized protein conserved in bacteria (DUF2272) 173 305 8.0E-25 T 23-04-2016 IPR019262 Domain of unknown function DUF2272 RR42_RS07235 a7819501abd3bf687d52e9475da82f12 94 ProDom PD030041 GP17 EXCLUSION GENE SUPERINFECTION 8 65 2.0E-11 T 23-04-2016 IPR020285 Superinfection exclusion protein, bacteriophage P22-type RR42_RS07575 a23fa3246a52d9cac0af873610021862 67 Pfam PF04325 Protein of unknown function (DUF465) 14 57 5.5E-11 T 23-04-2016 IPR007420 Protein of unknown function DUF465 RR42_RS26965 6643442d3e0f956821371d570aff5005 71 SUPERFAMILY SSF54373 2 70 5.89E-14 T 23-04-2016 RR42_RS11315 778e204b3e6de109b50b3cfc9b9017f6 61 Pfam PF06945 Protein of unknown function (DUF1289) 7 51 1.2E-17 T 23-04-2016 IPR010710 Protein of unknown function DUF1289 RR42_RS13770 8478843148a79a33ebe12506b481a4b1 102 Pfam PF09928 Predicted small integral membrane protein (DUF2160) 4 102 1.1E-36 T 23-04-2016 IPR018678 Protein of unknown function DUF2160, transmembrane RR42_RS37620 a4bbe3918f473d938b4ba3a8bd452b9c 713 SUPERFAMILY SSF52266 323 576 4.39E-17 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain RR42_RS17900 f417b9f093498fdd96edac0dfa3be9d1 210 PANTHER PTHR30086:SF12 16 201 9.5E-70 T 23-04-2016 RR42_RS17900 f417b9f093498fdd96edac0dfa3be9d1 210 PANTHER PTHR30086 16 201 9.5E-70 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RR42_RS17900 f417b9f093498fdd96edac0dfa3be9d1 210 Pfam PF01810 LysE type translocator 28 199 3.2E-16 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RR42_RS07745 3dc96b3dd351f8c3a7345e127d52b926 137 Pfam PF13670 Peptidase propeptide and YPEB domain 13 94 2.5E-23 T 23-04-2016 IPR025711 PepSY domain RR42_RS03420 fa572e54be48a0ec58a1eae2fcb5ddda 340 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 17 327 8.7E-101 T 23-04-2016 IPR016833 Putative sodium bile acid cotransporter RR42_RS03420 fa572e54be48a0ec58a1eae2fcb5ddda 340 PANTHER PTHR18640 16 331 6.0E-89 T 23-04-2016 IPR016833 Putative sodium bile acid cotransporter RR42_RS03420 fa572e54be48a0ec58a1eae2fcb5ddda 340 PIRSF PIRSF026166 8 339 6.1E-109 T 23-04-2016 IPR016833 Putative sodium bile acid cotransporter RR42_RS16335 613e126588efdd1e09b2efc5ff45dc6a 145 Gene3D G3DSA:1.25.40.10 77 135 2.5E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RR42_RS14045 47ca4899f977dd8ac4ce39cd6462498c 118 Pfam PF16137 Domain of unknown function (DUF4845) 31 113 1.8E-17 T 23-04-2016 IPR032314 Protein of unknown function DUF4845 RR42_RS10705 9156a19faf9d678b5176f988d5e77b4f 98 Gene3D G3DSA:3.30.70.1060 1 90 9.7E-21 T 23-04-2016 RR42_RS10705 9156a19faf9d678b5176f988d5e77b4f 98 SUPERFAMILY SSF54909 1 90 3.75E-20 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RR42_RS10705 9156a19faf9d678b5176f988d5e77b4f 98 Pfam PF03795 YCII-related domain 1 88 1.3E-20 T 23-04-2016 IPR005545 YCII-related RR42_RS09850 00f6c33452340dca4821eedab7111994 154 Gene3D G3DSA:1.10.260.40 6 49 2.9E-10 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS09850 00f6c33452340dca4821eedab7111994 154 Pfam PF01381 Helix-turn-helix 6 49 1.8E-8 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RR42_RS09850 00f6c33452340dca4821eedab7111994 154 SUPERFAMILY SSF47413 6 50 6.19E-9 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS34655 d4be27e59aa1cd931862d5f5a05f8c4d 322 PANTHER PTHR12338 47 322 6.5E-51 T 23-04-2016 RR42_RS34655 d4be27e59aa1cd931862d5f5a05f8c4d 322 SUPERFAMILY SSF51126 213 237 2.23E-8 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor RR42_RS34655 d4be27e59aa1cd931862d5f5a05f8c4d 322 SUPERFAMILY SSF51126 14 165 2.23E-8 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor RR42_RS34655 d4be27e59aa1cd931862d5f5a05f8c4d 322 PANTHER PTHR12338:SF6 47 322 6.5E-51 T 23-04-2016 RR42_RS05820 6d0a901fe1c396925a1c4d05b9c0ca80 161 Pfam PF13801 Heavy-metal resistance 15 137 6.2E-29 T 23-04-2016 IPR025961 Heavy-metal resistance protein RR42_RS16145 18368e9f2b24a7b2803f36a6b49a303c 105 Pfam PF08961 Nuclear receptor-binding factor 2, autophagy regulator 3 46 5.3E-6 T 23-04-2016 IPR015056 Nuclear receptor-binding factor 2 GO:0006914 RR42_RS08540 f9e5c388431d64eccf4f7e2a0491d320 141 Pfam PF06995 Phage P2 GpU 6 125 2.7E-42 T 23-04-2016 IPR009734 Myoviridae, GpU RR42_RS08540 f9e5c388431d64eccf4f7e2a0491d320 141 PIRSF PIRSF029208 1 140 2.8E-54 T 23-04-2016 IPR016912 Bacteriophage P2, GpU RR42_RS36930 b741a6b4df7af0f9fafd130c6dd3b30c 195 Pfam PF10712 NAD-specific glutamate dehydrogenase 1 194 5.4E-71 T 23-04-2016 IPR019651 Glutamate dehydrogenase, NAD-specific RR42_RS18445 656bbdbc20afeeb9a1fc75be81a21970 373 Pfam PF14351 Domain of unknown function (DUF4401) 33 366 1.3E-53 T 23-04-2016 IPR025513 Domain of unknown function DUF4401 RR42_RS15720 c3f8d3df5fc4dfb17178fcf0cc7bd6fc 308 Pfam PF02706 Chain length determinant protein 36 102 1.7E-5 T 23-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 RR42_RS19910 6d90a2f0c5b255ba95ec024ed94b6f6a 506 Pfam PF13785 Domain of unknown function (DUF4178) 284 417 1.4E-22 T 23-04-2016 IPR025235 Domain of unknown function DUF4178 RR42_RS19910 6d90a2f0c5b255ba95ec024ed94b6f6a 506 Pfam PF13785 Domain of unknown function (DUF4178) 57 202 5.9E-21 T 23-04-2016 IPR025235 Domain of unknown function DUF4178 RR42_RS06740 67dfc2908121c84ff598e239431f3814 95 Gene3D G3DSA:1.10.260.40 15 54 1.8E-7 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RR42_RS10895 e3067ced67409208fc7b0a225cc8c08c 127 Pfam PF07238 PilZ domain 22 110 4.4E-8 T 23-04-2016 IPR009875 PilZ domain GO:0035438 RR42_RS03150 611d76ea4cdce9c725ffd976f61de1a5 203 Pfam PF11161 Protein of unknown function (DUF2946) 1 195 3.3E-67 T 23-04-2016 IPR021332 Protein of unknown function DUF2944 RR42_RS10450 71d3185397780b1dbf3649de8871d44f 355 Pfam PF11740 Plasmid replication region DNA-binding N-term 43 154 3.9E-19 T 23-04-2016 IPR021104 KfrA, N-terminal DNA-binding domain RR42_RS03770 5fefb0c026f9b621c3dbcd9c3d117dfc 74 Pfam PF11390 NADH-dependant formate dehydrogenase delta subunit FdsD 5 66 2.2E-28 T 23-04-2016 IPR021074 Formate dehydrogenase, delta subunit RR42_RS18450 89414e61d508b8e4ef4961e058680ca0 351 Pfam PF09925 Predicted membrane protein (DUF2157) 22 160 4.8E-25 T 23-04-2016 IPR018677 Domain of unknown function DUF2157 RR42_RS04115 dfd040bd36d91a311162f24f562fc23a 169 Pfam PF07811 TadE-like protein 13 55 2.3E-9 T 23-04-2016 IPR012495 TadE-like RR42_RS14005 d459c5221c9ba443db015299922d5fa6 400 PIRSF PIRSF015557 7 400 1.3E-152 T 23-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 RR42_RS14005 d459c5221c9ba443db015299922d5fa6 400 Pfam PF10093 Uncharacterized protein conserved in bacteria (DUF2331) 12 396 9.0E-150 T 23-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 RR42_RS14005 d459c5221c9ba443db015299922d5fa6 400 TIGRFAM TIGR03837 efp_adjacent_2: conserved hypothetical protein, PP_1857 family 12 396 1.9E-153 T 23-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 RR42_RS04755 fe2fcb443ec422d91329e81c191b49f2 387 Pfam PF01757 Acyltransferase family 13 353 1.7E-21 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 RR42_RS12390 dc7d284ee0f2369de57f19b78eeaaf92 170 Pfam PF02293 AmiS/UreI family transporter 1 167 8.9E-59 T 23-04-2016 IPR003211 AmiS/UreI transporter GO:0006810|GO:0016020 RR42_RS16515 f38bc2a13e2555687bb80e72dc7d80ea 114 Pfam PF13663 Domain of unknown function (DUF4148) 17 72 7.0E-14 T 23-04-2016 IPR025421 Protein of unknown function DUF4148 RR42_RS04010 9ae6772bf19c37b74e5b7c3b7841546e 293 Pfam PF13490 Putative zinc-finger 3 36 7.9E-9 T 23-04-2016 IPR027383 Putative zinc-finger RR42_RS12755 e42b164d478d1846fc4c288c695e58a9 141 Pfam PF14347 Domain of unknown function (DUF4399) 51 141 1.4E-38 T 23-04-2016 IPR025512 Domain of unknown function DUF4399 RR42_RS03065 77c94f06d8e84a26bf2031685d521741 105 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 21 85 7.6E-27 T 23-04-2016 IPR019886 Sodium symporter small subunit, predicted RR42_RS03065 77c94f06d8e84a26bf2031685d521741 105 Pfam PF13937 Domain of unknown function (DUF4212) 19 85 1.7E-23 T 23-04-2016 IPR019886 Sodium symporter small subunit, predicted RR42_RS10400 201432de44c780855650d594df45a07e 97 Pfam PF13663 Domain of unknown function (DUF4148) 1 65 1.6E-10 T 23-04-2016 IPR025421 Protein of unknown function DUF4148 RR42_RS06445 1cd23eaf8ac05bf686d06d6f96ab4e2d 201 Pfam PF03358 NADPH-dependent FMN reductase 11 141 3.1E-8 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 RR42_RS06445 1cd23eaf8ac05bf686d06d6f96ab4e2d 201 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 23-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 RR42_RS06445 1cd23eaf8ac05bf686d06d6f96ab4e2d 201 SUPERFAMILY SSF52218 1 195 6.95E-60 T 23-04-2016 IPR029039 Flavoprotein-like domain RR42_RS06445 1cd23eaf8ac05bf686d06d6f96ab4e2d 201 Gene3D G3DSA:3.40.50.360 1 198 8.1E-67 T 23-04-2016 IPR029039 Flavoprotein-like domain RR42_RS06445 1cd23eaf8ac05bf686d06d6f96ab4e2d 201 PANTHER PTHR30546 1 201 1.0E-71 T 23-04-2016 RR42_RS06445 1cd23eaf8ac05bf686d06d6f96ab4e2d 201 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 194 1.2E-42 T 23-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 RR42_RS15510 13da404e760c07c042408db314821d3e 189 Pfam PF13681 Type IV pilus assembly protein PilX C-term 98 188 1.1E-16 T 23-04-2016 IPR025205 PilX/PilW C-terminal domain RR42_RS15510 13da404e760c07c042408db314821d3e 189 Pfam PF14341 PilX N-terminal 20 70 1.1E-11 T 23-04-2016 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain RR42_RS05045 f506d9743a2dfd83b060e2d2ea196450 187 Gene3D G3DSA:2.40.160.20 68 173 2.5E-4 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RR42_RS10375 4bcefa5e98796c4654056e8baa733199 310 PANTHER PTHR30482 1 307 1.6E-60 T 23-04-2016 RR42_RS10375 4bcefa5e98796c4654056e8baa733199 310 Pfam PF02653 Branched-chain amino acid transport system / permease component 26 289 7.3E-31 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RR42_RS03030 e8c2c011bf0f1c0d92b0ad97077b1112 69 Pfam PF07869 Protein of unknown function (DUF1656) 4 59 2.8E-23 T 23-04-2016 IPR012451 Protein of unknown function DUF1656 RR42_RS02305 be9b48a23168d0079b749fd26cf72555 444 Pfam PF04966 Carbohydrate-selective porin, OprB family 69 444 8.4E-47 T 23-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 RR42_RS30890 c865e35c07a785014ca4bd2319e87d6f 187 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 121 167 2.2E-11 T 23-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RR42_RS14905 f89207ff169843133a31c6522d2f5cc0 179 Pfam PF10722 Putative bacterial sensory transduction regulator 25 146 3.9E-5 T 23-04-2016 IPR019660 Putative sensory transduction regulator YbjN RR42_RS18670 981514299fb086ea96e433d9948e8202 228 PANTHER PTHR30399 1 226 5.4E-44 T 23-04-2016 RR42_RS18670 981514299fb086ea96e433d9948e8202 228 Pfam PF01863 Protein of unknown function DUF45 17 221 2.9E-52 T 23-04-2016 IPR002725 Protein of unknown function DUF45 RR42_RS09195 593ffdfeba4e133de21a29dc38cafa2e 404 Pfam PF05940 NnrS protein 23 398 1.5E-107 T 23-04-2016 IPR010266 NnrS RR42_RS05955 dc9e922063563c749962a77d675adcb6 143 Pfam PF08897 Domain of unknown function (DUF1841) 5 139 1.2E-62 T 23-04-2016 IPR014993 Protein of unknown function DUF1841 RR42_RS05425 e90f4f0d3cf30f090c67a9d000b8bc02 144 Pfam PF12279 Protein of unknown function (DUF3619) 10 142 3.5E-43 T 23-04-2016 IPR022064 Protein of unknown function DUF3619 RR42_RS15920 91159a9cad380ec62835fa2077d0dcfe 248 Pfam PF10099 Anti-sigma-K factor rskA 63 241 2.3E-30 T 23-04-2016 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 RR42_RS01070 216c97325cd7c85a1e1fb76df5143dfd 183 Pfam PF07987 Domain of unkown function (DUF1775) 28 171 4.6E-49 T 23-04-2016 IPR012533 GLE1, N-terminal, bacteria RR42_RS08590 a0b7acc427fb397295a13434fad3ec31 205 Pfam PF04717 Type VI secretion system, phage-baseplate injector 4 116 2.9E-42 T 23-04-2016 IPR006531 Gp5 N-terminal RR42_RS08590 a0b7acc427fb397295a13434fad3ec31 205 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 6 203 2.5E-58 T 23-04-2016 IPR013046 Phage baseplate assembly protein V/Gp45 RR42_RS08735 c5e6da68cedab7af6846dd61a65029da 346 PANTHER PTHR38133:SF1 34 212 1.8E-38 T 23-04-2016 RR42_RS08735 c5e6da68cedab7af6846dd61a65029da 346 PANTHER PTHR38133 34 212 1.8E-38 T 23-04-2016 RR42_RS04500 fa34974ebf398e5879f841e14a39fd50 109 Pfam PF06305 Protein of unknown function (DUF1049) 23 82 7.9E-13 T 23-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 RR42_RS05415 11ace5385cc463faa578e57de0fffa7e 188 Pfam PF06271 RDD family 29 176 2.5E-20 T 23-04-2016 IPR010432 RDD RR42_RS04480 220d63b43599b545026ffc88dcd0e89a 77 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 2.1E-19 T 23-04-2016 IPR018638 Domain of unknown function DUF2061, membrane RR42_RS15730 e66e87cde437980bc9b08803549f47db 198 PANTHER PTHR30576 1 197 2.5E-78 T 23-04-2016 RR42_RS15730 e66e87cde437980bc9b08803549f47db 198 Pfam PF02397 Bacterial sugar transferase 4 197 1.1E-53 T 23-04-2016 IPR003362 Bacterial sugar transferase RR42_RS01270 612f2dd868666ed250a747b080d5c293 291 Pfam PF11004 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase 19 288 4.3E-111 T 23-04-2016 IPR021266 Kdo hydroxylase RR42_RS20570 3becc10699840325ce557f04b76d361d 169 Pfam PF01618 MotA/TolQ/ExbB proton channel family 83 149 1.4E-5 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RR42_RS14125 a146d93020e84805079fc173ac54d774 198 PANTHER PTHR38099 75 197 3.9E-19 T 23-04-2016 RR42_RS14125 a146d93020e84805079fc173ac54d774 198 Pfam PF02620 Uncharacterized ACR, COG1399 77 195 1.5E-21 T 23-04-2016 IPR003772 Protein of unknown function DUF177 RR42_RS04450 47ec5928c1c6dc8c206bbbfaa77606ea 187 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 115 170 7.1E-13 T 23-04-2016 IPR018637 Domain of unknown function DUF2059 RR42_RS16870 b5f018a07f620da31eb73803201bc08e 196 Pfam PF13633 Prokaryotic N-terminal methylation site 17 40 2.6E-5 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RR42_RS20685 117599835f4759aeec98086571f525cc 421 Pfam PF11170 Protein of unknown function (DUF2957) 77 418 2.6E-139 T 23-04-2016 IPR021340 Protein of unknown function DUF2957 RR42_RS15500 af4921241431bbc9cd41673abaf0301e 178 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 18 157 5.2E-28 T 23-04-2016 IPR013362 Pilus modification type IV, PilV RR42_RS05835 d14cc0baee57e2479a38f2932ec49c1a 391 Pfam PF05762 VWA domain containing CoxE-like protein 185 273 1.0E-7 T 23-04-2016 IPR008912 Uncharacterised protein family CoxE-like RR42_RS16035 0951c42535a8762b1987e8a448488c50 1362 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 976 1322 1.7E-65 T 23-04-2016 IPR007452 Translocation and assembly module TamB RR42_RS16035 0951c42535a8762b1987e8a448488c50 1362 PANTHER PTHR36985 9 1323 7.4E-86 T 23-04-2016 RR42_RS17495 2ddf858b7e1edaffc67d2825c6172015 60 Gene3D G3DSA:2.40.40.20 1 28 4.3E-4 T 23-04-2016 RR42_RS21225 d8db215af8cb6c18808cf87282cab39e 101 Pfam PF11017 Protein of unknown function (DUF2855) 2 84 2.4E-17 T 23-04-2016 IPR021276 Protein of unknown function DUF2855 RR42_RS07090 38190a1bcfef54433c56ef858f454fc6 132 Pfam PF14485 Domain of unknown function (DUF4431) 83 124 9.2E-14 T 23-04-2016 IPR027826 Domain of unknown function DUF4431 RR42_RS01215 c04e1ed50774e84ba3e5e0b68dc5014d 62 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 5 34 9.9E-5 T 23-04-2016 IPR022453 Zinc finger, MqsA-type RR42_RS01215 c04e1ed50774e84ba3e5e0b68dc5014d 62 Pfam PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA 35 62 2.2E-9 T 23-04-2016 IPR032758 Antitoxin MqsA/igA-2 RR42_RS04150 5d2aaf3b3e96069f73495c62736ee883 58 Pfam PF04964 Flp/Fap pilin component 13 56 1.0E-14 T 23-04-2016 IPR007047 Flp/Fap pilin component RR42_RS09530 2e426755f36fb6948187f117c75ffb67 245 Pfam PF14366 Domain of unknown function (DUF4410) 54 192 4.5E-34 T 23-04-2016 IPR025522 Protein of unknown function DUF4410 RR42_RS03190 d27ab32dd5e73b7beb43d51aecde546f 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 6 104 1.4E-26 T 23-04-2016 IPR008407 Branched-chain amino acid transport, AzlD RR42_RS00750 f173f1552a045843dbcb0d974d67af8c 317 Pfam PF11306 Protein of unknown function (DUF3108) 90 306 7.7E-23 T 23-04-2016 IPR021457 Protein of unknown function DUF3108 RR42_RS14495 9516f818731f33ba316b8283da19aea1 400 Pfam PF11062 Protein of unknown function (DUF2863) 5 399 1.6E-175 T 23-04-2016 IPR021292 Protein of unknown function DUF2863 RR42_RS24655 5e6ec90c7cd41824028211aeaaaf685b 236 Pfam PF00860 Permease family 2 235 4.8E-60 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RR42_RS24655 5e6ec90c7cd41824028211aeaaaf685b 236 PANTHER PTHR11119 2 236 5.8E-56 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RR42_RS06280 5c7f065b0e88651438b861e1490d9195 352 Gene3D G3DSA:3.60.21.10 68 252 4.0E-5 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS06280 5c7f065b0e88651438b861e1490d9195 352 SUPERFAMILY SSF56300 45 291 8.35E-9 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RR42_RS03545 3953fcdc5297332ac20913cbf38ac2fb 286 Pfam PF13503 Domain of unknown function (DUF4123) 46 131 5.3E-10 T 23-04-2016 IPR025391 Domain of unknown function DUF4123 RR42_RS17725 4830e8f4d6116f0fc5360a40dba6896d 155 PANTHER PTHR35603 4 153 3.8E-22 T 23-04-2016 RR42_RS02755 9ec97802b446b49ecfcce7508c88b88a 112 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 103 2.4E-25 T 23-04-2016 IPR008407 Branched-chain amino acid transport, AzlD RR42_RS01890 8622ceb7e2247198a5391439df5ab582 70 Pfam PF11174 Protein of unknown function (DUF2970) 14 69 3.9E-24 T 23-04-2016 IPR021344 Protein of unknown function DUF2970 RR42_RS06440 cb558c1cae84ab88ff028f2bdfd77585 140 Pfam PF09842 Predicted membrane protein (DUF2069) 27 126 3.1E-36 T 23-04-2016 IPR018643 Protein of unknown function DUF2069, membrane RR42_RS29240 9f6c9fca8b8d0c3f3b0a7ddbce6c34e0 234 Pfam PF13463 Winged helix DNA-binding domain 187 230 2.6E-13 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RR42_RS01425 97f924fe9b99a8c45b985deda188b125 64 Pfam PF11146 Protein of unknown function (DUF2905) 3 64 1.3E-18 T 23-04-2016 IPR021320 Protein of unknown function DUF2905 RR42_RS03735 6af9cde066115ca356ad29f6f58d6d00 555 Pfam PF10460 Peptidase M30 191 555 3.4E-171 T 23-04-2016 IPR019501 Peptidase M30, hyicolysin RR42_RS36420 45299dafcf15bb042cd247ddeb3962dd 81 SUPERFAMILY SSF54373 2 74 6.28E-6 T 23-04-2016 RR42_RS37755 b05602975ae0c865325aa48a4996dcf9 100 SUPERFAMILY SSF51556 19 99 4.25E-11 T 23-04-2016 IPR032466 Metal-dependent hydrolase RR42_RS37755 b05602975ae0c865325aa48a4996dcf9 100 Gene3D G3DSA:3.20.20.140 20 99 4.2E-10 T 23-04-2016 RR42_RS12045 c41dbca641470d4998abca9d64ea6b86 388 Pfam PF08907 Domain of unknown function (DUF1853) 33 371 1.3E-78 T 23-04-2016 IPR015003 Protein of unknown function DUF1853 RR42_RS04145 e8f39c5e90962b0bbfea55c2de5edc1a 182 Pfam PF01478 Type IV leader peptidase family 15 117 5.9E-15 T 23-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 RR42_RS00090 554e5fbc30145fb4c3ff18beedccbb8a 116 Pfam PF07363 Protein of unknown function (DUF1484) 38 88 8.2E-8 T 23-04-2016 IPR009957 Protein of unknown function DUF1484 RR42_RS03395 4cf40f7d345467de5f3f0172b809f922 177 SUPERFAMILY SSF54626 10 176 1.07E-34 T 23-04-2016 IPR016087 Chalcone isomerase GO:0016872 RR42_RS03395 4cf40f7d345467de5f3f0172b809f922 177 Pfam PF16036 Chalcone isomerase-like 8 176 2.4E-52 T 23-04-2016 IPR016087 Chalcone isomerase GO:0016872 RR42_RS06765 00a63103fd548546b3e2d072f918674b 142 Gene3D G3DSA:3.40.91.30 41 140 9.1E-12 T 23-04-2016 IPR011578 Restriction endonuclease, FokI, C-terminal/endonuclease I, core GO:0003677|GO:0004536 RR42_RS08600 59bad090ed734438d4566bfb38b432d6 146 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 130 2.1E-48 T 23-04-2016 IPR009678 Bacteriophage tail completion protein R RR42_RS11020 09999b361a591c4b6740a803d44fb3a8 108 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 100 2.8E-25 T 23-04-2016 IPR009241 Toxin HigB-like RR42_RS04155 ec5a2b76f545f7dbaf01a69d6980fbaa 61 Pfam PF04964 Flp/Fap pilin component 11 56 2.5E-19 T 23-04-2016 IPR007047 Flp/Fap pilin component RR42_RS16525 f44a55818b8b73b9dee22f1f8a6a7685 261 Pfam PF13490 Putative zinc-finger 5 37 2.5E-9 T 23-04-2016 IPR027383 Putative zinc-finger RR42_RS23190 e304ee11a1da6b7b891df2b5a636f3fe 175 Pfam PF02754 Cysteine-rich domain 6 82 6.0E-5 T 23-04-2016 IPR004017 Cysteine-rich domain RR42_RS23190 e304ee11a1da6b7b891df2b5a636f3fe 175 Pfam PF02754 Cysteine-rich domain 118 171 0.002 T 23-04-2016 IPR004017 Cysteine-rich domain RR42_RS08645 fec058614ffa4003839ccd56fe2671b9 272 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 5 272 7.3E-107 T 23-04-2016 IPR009228 Capsid scaffolding protein GpO GO:0019069 RR42_RS16165 b6b156583390dc215b420427dc687cfc 233 Pfam PF04402 Protein of unknown function (DUF541) 35 227 3.2E-26 T 23-04-2016 IPR007497 Protein of unknown function DUF541 RR42_RS08880 0d657225034bf8970d5f9d751d9d68b4 99 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 9 76 2.5E-22 T 23-04-2016 IPR018720 Domain of unknown function DUF2249 RR42_RS01115 e654f1d929e4e4818aa974b2fe17284a 75 Pfam PF13490 Putative zinc-finger 14 47 9.4E-5 T 23-04-2016 IPR027383 Putative zinc-finger RR42_RS17935 3193ae5f04823ee6439a28bd08c2c9d0 209 Pfam PF08750 CNP1-like family 61 198 1.3E-41 T 23-04-2016 IPR014861 Uncharacterised domain CNP1 RR42_RS15725 cd4298ff82cdaacac367f79269be6b21 243 Pfam PF01757 Acyltransferase family 13 237 1.3E-19 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747