RMET_RS00020	SM00382	ATPases associated with a variety of cellular activities
RMET_RS00020	SM00760	Bacterial dnaA protein helix-turn-helix domain
RMET_RS00025	SM00480	DNA polymerase III beta subunit
RMET_RS00030	SM00387	Histidine kinase-like ATPases
RMET_RS00030	SM00433	TopoisomeraseII
RMET_RS00050	SM00342	helix_turn_helix, arabinose operon control protein
RMET_RS00065	SM00382	ATPases associated with a variety of cellular activities
RMET_RS00090	SM00487	DEAD-like helicases superfamily
RMET_RS00095	SM00116	Domain in cystathionine beta-synthase and other proteins.
RMET_RS00110	SM00849	Metallo-beta-lactamase superfamily
RMET_RS00125	SM00342	helix_turn_helix, arabinose operon control protein
RMET_RS00150	SM00448	cheY-homologous receiver domain
RMET_RS00150	SM00862	Transcriptional regulatory protein, C terminal
RMET_RS00155	SM00448	cheY-homologous receiver domain
RMET_RS00155	SM00862	Transcriptional regulatory protein, C terminal
RMET_RS00220	SM00387	Histidine kinase-like ATPases
RMET_RS00220	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS00225	SM00448	cheY-homologous receiver domain
RMET_RS00225	SM00862	Transcriptional regulatory protein, C terminal
RMET_RS00230	SM00671	Sel1-like repeats.
RMET_RS00240	SM00460	Transglutaminase/protease-like homologues
RMET_RS00245	SM00845	GatB domain
RMET_RS00320	SM00729	Elongator protein 3, MiaB family, Radical SAM
RMET_RS00325	SM00796	Allophanate hydrolase subunit 1
RMET_RS00330	SM00797	Allophanate hydrolase subunit 2
RMET_RS00370	SM00382	ATPases associated with a variety of cellular activities
RMET_RS00425	SM00346	helix_turn_helix isocitrate lyase regulation
RMET_RS00445	SM00450	Rhodanese Homology Domain
RMET_RS00455	SM01018	B12 binding domain
RMET_RS00465	SM00421	helix_turn_helix, Lux Regulon
RMET_RS00465	SM00448	cheY-homologous receiver domain
RMET_RS00475	SM00387	Histidine kinase-like ATPases
RMET_RS00495	SM00836	DALR anticodon binding domain
RMET_RS00495	SM01016	Arginyl tRNA synthetase N terminal dom
RMET_RS00520	SM00849	Metallo-beta-lactamase superfamily
RMET_RS00525	SM00422	helix_turn_helix, mercury resistance
RMET_RS00540	SM00947	Carbonic anhydrase
RMET_RS00600	SM00729	Elongator protein 3, MiaB family, Radical SAM
RMET_RS00600	SM00876	Biotin and Thiamin Synthesis associated domain
RMET_RS00620	SM00849	Metallo-beta-lactamase superfamily
RMET_RS00640	SM00833	Cobalamin synthesis protein cobW C-terminal domain
RMET_RS00650	SM00833	Cobalamin synthesis protein cobW C-terminal domain
RMET_RS00675	SM00382	ATPases associated with a variety of cellular activities
RMET_RS00675	SM01086	C-terminal, D2-small domain, of ClpB protein
RMET_RS00690	SM00448	cheY-homologous receiver domain
RMET_RS00695	SM00387	Histidine kinase-like ATPases
RMET_RS00695	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS00755	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RMET_RS00815	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RMET_RS00815	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RMET_RS00865	SM00996	S-adenosyl-L-homocysteine hydrolase
RMET_RS00865	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
RMET_RS00930	SM00905	Dihydroneopterin aldolase
RMET_RS01005	SM00829	Enoylreductase
RMET_RS01040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RMET_RS01060	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RMET_RS01085	SM00100	Cyclic nucleotide-monophosphate binding domain
RMET_RS01095	SM00382	ATPases associated with a variety of cellular activities
RMET_RS01115	SM00382	ATPases associated with a variety of cellular activities
RMET_RS01135	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
RMET_RS01145	SM00936	Penicillin-binding protein 5, C-terminal domain 
RMET_RS01165	SM00387	Histidine kinase-like ATPases
RMET_RS01165	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS01170	SM00382	ATPases associated with a variety of cellular activities
RMET_RS01170	SM00448	cheY-homologous receiver domain
RMET_RS01205	SM00382	ATPases associated with a variety of cellular activities
RMET_RS01220	SM00938	Nitrogen regulatory protein P-II
RMET_RS01270	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RMET_RS01270	SM00245	tail specific protease
RMET_RS01275	SM00855	Phosphoglycerate mutase family
RMET_RS01280	SM00450	Rhodanese Homology Domain
RMET_RS01290	SM00507	HNH nucleases
RMET_RS01400	SM00382	ATPases associated with a variety of cellular activities
RMET_RS01415	SM01012	RMET_RS01415
RMET_RS01430	SM00382	ATPases associated with a variety of cellular activities
RMET_RS01430	SM00962	SRP54-type protein, GTPase domain
RMET_RS01430	SM00963	SRP54-type protein, helical bundle domain
RMET_RS01470	SM01400	RMET_RS01470
RMET_RS01490	SM00028	Tetratricopeptide repeats
RMET_RS01495	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
RMET_RS01495	SM01232	RMET_RS01495
RMET_RS01505	SM00478	endonuclease III
RMET_RS01510	SM00464	Found in ATP-dependent protease La (LON)
RMET_RS01545	SM00382	ATPases associated with a variety of cellular activities
RMET_RS01560	SM00116	Domain in cystathionine beta-synthase and other proteins.
RMET_RS01625	SM00382	ATPases associated with a variety of cellular activities
RMET_RS01680	SM00226	Low molecular weight phosphatase family
RMET_RS01690	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RMET_RS01700	SM00062	Bacterial periplasmic substrate-binding proteins
RMET_RS01705	SM00346	helix_turn_helix isocitrate lyase regulation
RMET_RS01710	SM00346	helix_turn_helix isocitrate lyase regulation
RMET_RS01715	SM00849	Metallo-beta-lactamase superfamily
RMET_RS01735	SM00062	Bacterial periplasmic substrate-binding proteins
RMET_RS01770	SM00382	ATPases associated with a variety of cellular activities
RMET_RS01830	SM00327	von Willebrand factor (vWF) type A domain
RMET_RS01835	SM00382	ATPases associated with a variety of cellular activities
RMET_RS01840	SM01092	CO dehydrogenase flavoprotein C-terminal domain
RMET_RS01845	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
RMET_RS01870	SM00382	ATPases associated with a variety of cellular activities
RMET_RS01885	SM00978	RMET_RS01885
RMET_RS01905	SM00834	Putative regulatory protein
RMET_RS01940	SM00155	Phospholipase D. Active site motifs.
RMET_RS01980	SM00382	ATPases associated with a variety of cellular activities
RMET_RS01990	SM00382	ATPases associated with a variety of cellular activities
RMET_RS02000	SM00344	helix_turn_helix ASNC type
RMET_RS02015	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
RMET_RS02020	SM00062	Bacterial periplasmic substrate-binding proteins
RMET_RS02035	SM00382	ATPases associated with a variety of cellular activities
RMET_RS02045	SM01329	RMET_RS02045
RMET_RS02105	SM00363	S4 RNA-binding domain
RMET_RS02120	SM00855	Phosphoglycerate mutase family
RMET_RS02135	SM00382	ATPases associated with a variety of cellular activities
RMET_RS02140	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RMET_RS02155	SM00798	AICARFT/IMPCHase bienzyme
RMET_RS02155	SM00851	MGS-like domain
RMET_RS02180	SM01011	Aminopeptidase P, N-terminal domain
RMET_RS02220	SM00650	Ribosomal RNA adenine dimethylases
RMET_RS02250	SM00563	Phosphate acyltransferases
RMET_RS02280	SM01091	Transporter associated domain
RMET_RS02295	SM00729	Elongator protein 3, MiaB family, Radical SAM
RMET_RS02305	SM00116	Domain in cystathionine beta-synthase and other proteins.
RMET_RS02310	SM00487	DEAD-like helicases superfamily
RMET_RS02310	SM00490	helicase superfamily c-terminal domain
RMET_RS02325	SM00421	helix_turn_helix, Lux Regulon
RMET_RS02325	SM00448	cheY-homologous receiver domain
RMET_RS02350	SM00387	Histidine kinase-like ATPases
RMET_RS02350	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS02355	SM00448	cheY-homologous receiver domain
RMET_RS02355	SM00862	Transcriptional regulatory protein, C terminal
RMET_RS02360	SM00382	ATPases associated with a variety of cellular activities
RMET_RS02380	SM00881	CoA binding domain
RMET_RS02450	SM00382	ATPases associated with a variety of cellular activities
RMET_RS02500	SM00487	DEAD-like helicases superfamily
RMET_RS02500	SM00490	helicase superfamily c-terminal domain
RMET_RS02525	SM00421	helix_turn_helix, Lux Regulon
RMET_RS02555	SM01001	AIR carboxylase
RMET_RS02605	SM00448	cheY-homologous receiver domain
RMET_RS02605	SM00862	Transcriptional regulatory protein, C terminal
RMET_RS02610	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RMET_RS02610	SM00387	Histidine kinase-like ATPases
RMET_RS02610	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS02615	SM01207	RMET_RS02615
RMET_RS02660	SM00646	RMET_RS02660
RMET_RS02680	SM00530	Helix-turn-helix XRE-family like proteins 
RMET_RS02685	SM00822	RMET_RS02685
RMET_RS02755	SM00829	Enoylreductase
RMET_RS02770	SM00382	ATPases associated with a variety of cellular activities
RMET_RS02800	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
RMET_RS02805	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RMET_RS02805	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
RMET_RS02870	SM01118	RMET_RS02870
RMET_RS02875	SM00382	ATPases associated with a variety of cellular activities
RMET_RS02895	SM00671	Sel1-like repeats.
RMET_RS02945	SM00116	Domain in cystathionine beta-synthase and other proteins.
RMET_RS02950	SM00116	Domain in cystathionine beta-synthase and other proteins.
RMET_RS02970	SM00382	ATPases associated with a variety of cellular activities
RMET_RS02970	SM00448	cheY-homologous receiver domain
RMET_RS02975	SM00387	Histidine kinase-like ATPases
RMET_RS02975	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS02985	SM00052	Putative diguanylate phosphodiesterase
RMET_RS02985	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RMET_RS02985	SM00091	PAS domain
RMET_RS02985	SM00267	diguanylate cyclase
RMET_RS03005	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
RMET_RS03075	SM00878	Biotin carboxylase C-terminal domain
RMET_RS03075	SM01209	RMET_RS03075
RMET_RS03095	SM00421	helix_turn_helix, Lux Regulon
RMET_RS03095	SM00448	cheY-homologous receiver domain
RMET_RS03100	SM00869	Autotransporter beta-domain
RMET_RS03100	SM00912	haemagglutination activity domain
RMET_RS03105	SM00883	Chaperonin 10 Kd subunit
RMET_RS03125	SM00382	ATPases associated with a variety of cellular activities
RMET_RS03125	SM01086	C-terminal, D2-small domain, of ClpB protein
RMET_RS03165	SM00155	Phospholipase D. Active site motifs.
RMET_RS03170	SM00671	Sel1-like repeats.
RMET_RS03180	SM00671	Sel1-like repeats.
RMET_RS03270	SM00858	RMET_RS03270
RMET_RS03275	SM00382	ATPases associated with a variety of cellular activities
RMET_RS03325	SM00382	ATPases associated with a variety of cellular activities
RMET_RS03360	SM01130	RMET_RS03360
RMET_RS03375	SM00448	cheY-homologous receiver domain
RMET_RS03380	SM00448	cheY-homologous receiver domain
RMET_RS03385	SM00260	Two component signalling adaptor domain
RMET_RS03390	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RMET_RS03395	SM00073	Histidine Phosphotransfer domain
RMET_RS03395	SM00260	Two component signalling adaptor domain
RMET_RS03395	SM00387	Histidine kinase-like ATPases
RMET_RS03395	SM00448	cheY-homologous receiver domain
RMET_RS03395	SM01231	RMET_RS03395
RMET_RS03435	SM00938	Nitrogen regulatory protein P-II
RMET_RS03445	SM00463	Small MutS-related domain
RMET_RS03455	SM00843	RMET_RS03455
RMET_RS03475	SM00062	Bacterial periplasmic substrate-binding proteins
RMET_RS03490	SM00382	ATPases associated with a variety of cellular activities
RMET_RS03495	SM00382	ATPases associated with a variety of cellular activities
RMET_RS03515	SM00116	Domain in cystathionine beta-synthase and other proteins.
RMET_RS03515	SM01091	Transporter associated domain
RMET_RS03530	SM00062	Bacterial periplasmic substrate-binding proteins
RMET_RS03540	SM01209	RMET_RS03540
RMET_RS03550	SM00382	ATPases associated with a variety of cellular activities
RMET_RS03585	SM00434	DNA Topoisomerase IV
RMET_RS03600	SM00830	Chorismate mutase type II
RMET_RS03630	SM00316	Ribosomal protein S1-like RNA-binding domain
RMET_RS03635	SM00411	bacterial (prokaryotic) histone like domain
RMET_RS03645	SM00028	Tetratricopeptide repeats
RMET_RS03650	SM00984	UDP binding domain
RMET_RS03665	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RMET_RS03690	SM00382	ATPases associated with a variety of cellular activities
RMET_RS03690	SM00930	RMET_RS03690
RMET_RS03705	SM00893	Electron transfer flavoprotein domain
RMET_RS03710	SM00893	Electron transfer flavoprotein domain
RMET_RS03725	SM00344	helix_turn_helix ASNC type
RMET_RS03730	SM00729	Elongator protein 3, MiaB family, Radical SAM
RMET_RS03780	SM00450	Rhodanese Homology Domain
RMET_RS03785	SM00481	DNA polymerase alpha chain like domain
RMET_RS03800	SM00382	ATPases associated with a variety of cellular activities
RMET_RS03820	SM00382	ATPases associated with a variety of cellular activities
RMET_RS03825	SM00382	ATPases associated with a variety of cellular activities
RMET_RS03850	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RMET_RS03850	SM00866	RMET_RS03850
RMET_RS03865	SM00072	Guanylate kinase homologues.
RMET_RS03890	SM00382	ATPases associated with a variety of cellular activities
RMET_RS03905	SM00316	Ribosomal protein S1-like RNA-binding domain
RMET_RS03935	SM01209	RMET_RS03935
RMET_RS03935	SM01210	RMET_RS03935
RMET_RS03970	SM00851	MGS-like domain
RMET_RS03995	SM00382	ATPases associated with a variety of cellular activities
RMET_RS04020	SM00116	Domain in cystathionine beta-synthase and other proteins.
RMET_RS04020	SM00382	ATPases associated with a variety of cellular activities
RMET_RS04030	SM00244	prohibitin homologues
RMET_RS04045	SM01007	Class II Aldolase and Adducin N-terminal domain
RMET_RS04075	SM01322	RMET_RS04075
RMET_RS04085	SM00867	YceI-like domain 
RMET_RS04145	SM01091	Transporter associated domain
RMET_RS04165	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
RMET_RS04175	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RMET_RS04175	SM00895	RMET_RS04175
RMET_RS04180	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RMET_RS04200	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
RMET_RS04210	SM00346	helix_turn_helix isocitrate lyase regulation
RMET_RS04220	SM00881	CoA binding domain
RMET_RS04270	SM00729	Elongator protein 3, MiaB family, Radical SAM
RMET_RS04285	SM00331	Sigma factor PP2C-like phosphatases
RMET_RS04285	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
RMET_RS04290	SM00220	Serine/Threonine protein kinases, catalytic domain
RMET_RS04300	SM00072	Guanylate kinase homologues.
RMET_RS04305	SM01409	RMET_RS04305
RMET_RS04310	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RMET_RS04310	SM00954	Region found in RelA / SpoT proteins
RMET_RS04365	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RMET_RS04365	SM00267	diguanylate cyclase
RMET_RS04370	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RMET_RS04425	SM00919	Malic enzyme, NAD binding domain
RMET_RS04425	SM01274	RMET_RS04425
RMET_RS04455	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RMET_RS04455	SM00895	RMET_RS04455
RMET_RS04495	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
RMET_RS04500	SM01092	CO dehydrogenase flavoprotein C-terminal domain
RMET_RS04615	SM00257	Lysin motif
RMET_RS04620	SM00917	LeuA allosteric (dimerisation) domain
RMET_RS04635	SM01387	RMET_RS04635
RMET_RS04640	SM00316	Ribosomal protein S1-like RNA-binding domain
RMET_RS04640	SM00322	K homology RNA-binding domain
RMET_RS04645	SM00829	Enoylreductase
RMET_RS04690	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
RMET_RS04695	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
RMET_RS04810	SM00382	ATPases associated with a variety of cellular activities
RMET_RS04840	SM00988	UreE urease accessory protein, N-terminal domain
RMET_RS04855	SM00530	Helix-turn-helix XRE-family like proteins 
RMET_RS04925	SM00631	RMET_RS04925
RMET_RS04960	SM00382	ATPases associated with a variety of cellular activities
RMET_RS05040	SM00363	S4 RNA-binding domain
RMET_RS05100	SM00478	endonuclease III
RMET_RS05125	SM00487	DEAD-like helicases superfamily
RMET_RS05125	SM00490	helicase superfamily c-terminal domain
RMET_RS05140	SM00226	Low molecular weight phosphatase family
RMET_RS05170	SM00271	DnaJ molecular chaperone homology domain
RMET_RS05205	SM00822	RMET_RS05205
RMET_RS05210	SM00937	RMET_RS05210
RMET_RS05215	SM00257	Lysin motif
RMET_RS05235	SM00382	ATPases associated with a variety of cellular activities
RMET_RS05245	SM00849	Metallo-beta-lactamase superfamily
RMET_RS05275	SM00460	Transglutaminase/protease-like homologues
RMET_RS05305	SM01192	RMET_RS05305
RMET_RS05305	SM01193	RMET_RS05305
RMET_RS05350	SM00481	DNA polymerase alpha chain like domain
RMET_RS05370	SM01130	RMET_RS05370
RMET_RS05380	SM00849	Metallo-beta-lactamase superfamily
RMET_RS05405	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
RMET_RS05405	SM00534	ATPase domain of DNA mismatch repair MUTS family
RMET_RS05455	SM00840	RMET_RS05455
RMET_RS05460	SM00478	endonuclease III
RMET_RS05470	SM00977	TilS substrate C-terminal domain
RMET_RS05485	SM00052	Putative diguanylate phosphodiesterase
RMET_RS05490	SM00267	diguanylate cyclase
RMET_RS05500	SM00829	Enoylreductase
RMET_RS05525	SM00833	Cobalamin synthesis protein cobW C-terminal domain
RMET_RS05535	SM00840	RMET_RS05535
RMET_RS05625	SM00965	Secretin and TonB N terminus short domain
RMET_RS05650	SM00062	Bacterial periplasmic substrate-binding proteins
RMET_RS05665	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RMET_RS05710	SM00116	Domain in cystathionine beta-synthase and other proteins.
RMET_RS05715	SM00563	Phosphate acyltransferases
RMET_RS05740	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RMET_RS05740	SM00895	RMET_RS05740
RMET_RS05795	SM00421	helix_turn_helix, Lux Regulon
RMET_RS05800	SM00882	Coenzyme A transferase
RMET_RS05805	SM00882	Coenzyme A transferase
RMET_RS05830	SM00954	Region found in RelA / SpoT proteins
RMET_RS05840	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
RMET_RS05865	SM00873	B3/4 domain
RMET_RS05865	SM00874	tRNA synthetase B5 domain
RMET_RS05865	SM00896	Ferredoxin-fold anticodon binding domain
RMET_RS05870	SM00411	bacterial (prokaryotic) histone like domain
RMET_RS05875	SM00422	helix_turn_helix, mercury resistance
RMET_RS05910	SM00448	cheY-homologous receiver domain
RMET_RS05910	SM00862	Transcriptional regulatory protein, C terminal
RMET_RS05915	SM00387	Histidine kinase-like ATPases
RMET_RS05915	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS05925	SM01192	RMET_RS05925
RMET_RS05925	SM01193	RMET_RS05925
RMET_RS06025	SM00421	helix_turn_helix, Lux Regulon
RMET_RS06025	SM00448	cheY-homologous receiver domain
RMET_RS06030	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RMET_RS06030	SM00091	PAS domain
RMET_RS06030	SM00387	Histidine kinase-like ATPases
RMET_RS06030	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS06080	SM00346	helix_turn_helix isocitrate lyase regulation
RMET_RS06100	SM00382	ATPases associated with a variety of cellular activities
RMET_RS06150	SM00953	RMET_RS06150
RMET_RS06175	SM00530	Helix-turn-helix XRE-family like proteins 
RMET_RS06205	SM00382	ATPases associated with a variety of cellular activities
RMET_RS06210	SM00382	ATPases associated with a variety of cellular activities
RMET_RS06220	SM00316	Ribosomal protein S1-like RNA-binding domain
RMET_RS06220	SM00732	Likely ribonuclease with RNase H fold.
RMET_RS06235	SM00491	RMET_RS06235
RMET_RS06280	SM00470	ParB-like nuclease domain
RMET_RS06295	SM00530	Helix-turn-helix XRE-family like proteins 
RMET_RS06365	SM00382	ATPases associated with a variety of cellular activities
RMET_RS06380	SM00849	Metallo-beta-lactamase superfamily
RMET_RS06380	SM01027	Beta-Casp domain
RMET_RS06580	SM00382	ATPases associated with a variety of cellular activities
RMET_RS06580	SM00989	RMET_RS06580
RMET_RS06595	SM00829	Enoylreductase
RMET_RS06660	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RMET_RS06725	SM00822	RMET_RS06725
RMET_RS06775	SM00382	ATPases associated with a variety of cellular activities
RMET_RS06820	SM00363	S4 RNA-binding domain
RMET_RS06845	SM00822	RMET_RS06845
RMET_RS06860	SM00729	Elongator protein 3, MiaB family, Radical SAM
RMET_RS06905	SM00062	Bacterial periplasmic substrate-binding proteins
RMET_RS06920	SM00382	ATPases associated with a variety of cellular activities
RMET_RS06945	SM00382	ATPases associated with a variety of cellular activities
RMET_RS06955	SM00387	Histidine kinase-like ATPases
RMET_RS06960	SM00448	cheY-homologous receiver domain
RMET_RS06960	SM00850	LytTr DNA-binding domain
RMET_RS07040	SM00986	Uracil DNA glycosylase superfamily
RMET_RS07040	SM00987	UreE urease accessory protein, C-terminal domain 
RMET_RS07055	SM01005	Alanine racemase, C-terminal domain
RMET_RS07060	SM00382	ATPases associated with a variety of cellular activities
RMET_RS07075	SM00382	ATPases associated with a variety of cellular activities
RMET_RS07090	SM00382	ATPases associated with a variety of cellular activities
RMET_RS07185	SM00968	SMC proteins Flexible Hinge Domain
RMET_RS07190	SM00771	ZipA, C-terminal domain (FtsZ-binding)
RMET_RS07195	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RMET_RS07195	SM00292	breast cancer carboxy-terminal domain
RMET_RS07195	SM00532	Ligase N family
RMET_RS07210	SM00530	Helix-turn-helix XRE-family like proteins 
RMET_RS07215	SM00363	S4 RNA-binding domain
RMET_RS07220	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RMET_RS07265	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RMET_RS07275	SM00935	Outer membrane protein (OmpH-like)
RMET_RS07330	SM00244	prohibitin homologues
RMET_RS07360	SM00116	Domain in cystathionine beta-synthase and other proteins.
RMET_RS07360	SM01240	RMET_RS07360
RMET_RS07420	SM00530	Helix-turn-helix XRE-family like proteins 
RMET_RS07445	SM00470	ParB-like nuclease domain
RMET_RS07460	SM00530	Helix-turn-helix XRE-family like proteins 
RMET_RS07510	SM00342	helix_turn_helix, arabinose operon control protein
RMET_RS07545	SM00327	von Willebrand factor (vWF) type A domain
RMET_RS07555	SM00961	Ribulose bisphosphate carboxylase, small chain
RMET_RS07610	SM00861	Transketolase, pyrimidine binding domain
RMET_RS07620	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
RMET_RS07655	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
RMET_RS07660	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
RMET_RS07680	SM00100	Cyclic nucleotide-monophosphate binding domain
RMET_RS07685	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
RMET_RS07685	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
RMET_RS07695	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
RMET_RS07760	SM00448	cheY-homologous receiver domain
RMET_RS07765	SM00886	Stress responsive A/B Barrel Domain
RMET_RS07815	SM00382	ATPases associated with a variety of cellular activities
RMET_RS07890	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RMET_RS07890	SM00091	PAS domain
RMET_RS07925	SM00382	ATPases associated with a variety of cellular activities
RMET_RS07965	SM00870	RMET_RS07965
RMET_RS07990	SM00091	PAS domain
RMET_RS07990	SM00382	ATPases associated with a variety of cellular activities
RMET_RS08030	SM00382	ATPases associated with a variety of cellular activities
RMET_RS08030	SM00843	RMET_RS08030
RMET_RS08055	SM00347	helix_turn_helix multiple antibiotic resistance protein
RMET_RS08070	SM00342	helix_turn_helix, arabinose operon control protein
RMET_RS08095	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RMET_RS08135	SM00382	ATPases associated with a variety of cellular activities
RMET_RS08175	SM00347	helix_turn_helix multiple antibiotic resistance protein
RMET_RS08180	SM00387	Histidine kinase-like ATPases
RMET_RS08180	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS08185	SM00448	cheY-homologous receiver domain
RMET_RS08185	SM00862	Transcriptional regulatory protein, C terminal
RMET_RS08240	SM00878	Biotin carboxylase C-terminal domain
RMET_RS08270	SM00849	Metallo-beta-lactamase superfamily
RMET_RS08275	SM00486	DNA polymerase type-B family
RMET_RS08305	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RMET_RS08305	SM00387	Histidine kinase-like ATPases
RMET_RS08305	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS08310	SM00448	cheY-homologous receiver domain
RMET_RS08310	SM00862	Transcriptional regulatory protein, C terminal
RMET_RS08440	SM00382	ATPases associated with a variety of cellular activities
RMET_RS08460	SM00091	PAS domain
RMET_RS08460	SM00267	diguanylate cyclase
RMET_RS08465	SM00052	Putative diguanylate phosphodiesterase
RMET_RS08480	SM00100	Cyclic nucleotide-monophosphate binding domain
RMET_RS08480	SM00419	helix_turn_helix, cAMP Regulatory protein
RMET_RS08505	SM00387	Histidine kinase-like ATPases
RMET_RS08505	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS08510	SM00421	helix_turn_helix, Lux Regulon
RMET_RS08510	SM00448	cheY-homologous receiver domain
RMET_RS08515	SM00448	cheY-homologous receiver domain
RMET_RS08595	SM00342	helix_turn_helix, arabinose operon control protein
RMET_RS08600	SM00829	Enoylreductase
RMET_RS08620	SM00346	helix_turn_helix isocitrate lyase regulation
RMET_RS08640	SM00878	Biotin carboxylase C-terminal domain
RMET_RS08675	SM00342	helix_turn_helix, arabinose operon control protein
RMET_RS08730	SM00342	helix_turn_helix, arabinose operon control protein
RMET_RS08770	SM00448	cheY-homologous receiver domain
RMET_RS08770	SM00862	Transcriptional regulatory protein, C terminal
RMET_RS08775	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RMET_RS08775	SM00387	Histidine kinase-like ATPases
RMET_RS08775	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS08810	SM00382	ATPases associated with a variety of cellular activities
RMET_RS08825	SM01091	Transporter associated domain
RMET_RS08855	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RMET_RS08955	SM00382	ATPases associated with a variety of cellular activities
RMET_RS08955	SM00989	RMET_RS08955
RMET_RS08960	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RMET_RS08960	SM00895	RMET_RS08960
RMET_RS08975	SM00382	ATPases associated with a variety of cellular activities
RMET_RS09010	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RMET_RS09015	SM00347	helix_turn_helix multiple antibiotic resistance protein
RMET_RS09065	SM00155	Phospholipase D. Active site motifs.
RMET_RS09095	SM00346	helix_turn_helix isocitrate lyase regulation
RMET_RS09100	SM00346	helix_turn_helix isocitrate lyase regulation
RMET_RS09120	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RMET_RS09125	SM00271	DnaJ molecular chaperone homology domain
RMET_RS09130	SM00248	ankyrin repeats
RMET_RS09180	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RMET_RS09180	SM00895	RMET_RS09180
RMET_RS09195	SM01007	Class II Aldolase and Adducin N-terminal domain
RMET_RS09230	SM00506	Appr-1"-p processing enzyme
RMET_RS09250	SM01007	Class II Aldolase and Adducin N-terminal domain
RMET_RS09255	SM00829	Enoylreductase
RMET_RS09265	SM00822	RMET_RS09265
RMET_RS09300	SM00382	ATPases associated with a variety of cellular activities
RMET_RS09305	SM00382	ATPases associated with a variety of cellular activities
RMET_RS09365	SM01211	RMET_RS09365
RMET_RS09375	SM00267	diguanylate cyclase
RMET_RS09415	SM00382	ATPases associated with a variety of cellular activities
RMET_RS09440	SM00382	ATPases associated with a variety of cellular activities
RMET_RS09440	SM00464	Found in ATP-dependent protease La (LON)
RMET_RS09445	SM00382	ATPases associated with a variety of cellular activities
RMET_RS09445	SM00994	ClpX C4-type zinc finger
RMET_RS09445	SM01086	C-terminal, D2-small domain, of ClpB protein
RMET_RS09480	SM00421	helix_turn_helix, Lux Regulon
RMET_RS09525	SM00530	Helix-turn-helix XRE-family like proteins 
RMET_RS09545	SM00354	helix_turn _helix lactose operon repressor
RMET_RS09565	SM00829	Enoylreductase
RMET_RS09575	SM00822	RMET_RS09575
RMET_RS09600	SM00421	helix_turn_helix, Lux Regulon
RMET_RS09640	SM00822	RMET_RS09640
RMET_RS09670	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RMET_RS09670	SM00895	RMET_RS09670
RMET_RS09675	SM00346	helix_turn_helix isocitrate lyase regulation
RMET_RS09700	SM00382	ATPases associated with a variety of cellular activities
RMET_RS09705	SM00382	ATPases associated with a variety of cellular activities
RMET_RS09760	SM00448	cheY-homologous receiver domain
RMET_RS09760	SM00862	Transcriptional regulatory protein, C terminal
RMET_RS09765	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RMET_RS09765	SM00387	Histidine kinase-like ATPases
RMET_RS09765	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS09800	SM00487	DEAD-like helicases superfamily
RMET_RS09800	SM00490	helicase superfamily c-terminal domain
RMET_RS09800	SM00982	RMET_RS09800
RMET_RS09800	SM01058	CarD-like/TRCF domain
RMET_RS09820	SM00382	ATPases associated with a variety of cellular activities
RMET_RS09820	SM01086	C-terminal, D2-small domain, of ClpB protein
RMET_RS09845	SM00852	Probable molybdopterin binding domain
RMET_RS09875	SM00670	Large family of predicted nucleotide-binding domains
RMET_RS09900	SM00382	ATPases associated with a variety of cellular activities
RMET_RS09925	SM00870	RMET_RS09925
RMET_RS10005	SM00382	ATPases associated with a variety of cellular activities
RMET_RS10055	SM00382	ATPases associated with a variety of cellular activities
RMET_RS10135	SM00347	helix_turn_helix multiple antibiotic resistance protein
RMET_RS10170	SM00316	Ribosomal protein S1-like RNA-binding domain
RMET_RS10180	SM00363	S4 RNA-binding domain
RMET_RS10195	SM00100	Cyclic nucleotide-monophosphate binding domain
RMET_RS10195	SM00419	helix_turn_helix, cAMP Regulatory protein
RMET_RS10255	SM00861	Transketolase, pyrimidine binding domain
RMET_RS10265	SM00382	ATPases associated with a variety of cellular activities
RMET_RS10300	SM00382	ATPases associated with a variety of cellular activities
RMET_RS10300	SM00448	cheY-homologous receiver domain
RMET_RS10305	SM00387	Histidine kinase-like ATPases
RMET_RS10305	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS10315	SM01230	RMET_RS10315
RMET_RS10320	SM00450	Rhodanese Homology Domain
RMET_RS10325	SM00852	Probable molybdopterin binding domain
RMET_RS10350	SM00382	ATPases associated with a variety of cellular activities
RMET_RS10350	SM00487	DEAD-like helicases superfamily
RMET_RS10350	SM00490	helicase superfamily c-terminal domain
RMET_RS10350	SM00847	Helicase associated domain (HA2)  Add an annotation
RMET_RS10375	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RMET_RS10395	SM00947	Carbonic anhydrase
RMET_RS10410	SM00344	helix_turn_helix ASNC type
RMET_RS10440	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RMET_RS10440	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RMET_RS10440	SM00387	Histidine kinase-like ATPases
RMET_RS10445	SM00421	helix_turn_helix, Lux Regulon
RMET_RS10445	SM00448	cheY-homologous receiver domain
RMET_RS10465	SM00967	RNA 2'-O ribose methyltransferase substrate binding
RMET_RS10470	SM00316	Ribosomal protein S1-like RNA-binding domain
RMET_RS10470	SM00357	Cold shock protein domain
RMET_RS10470	SM00955	RMET_RS10470
RMET_RS10495	SM00788	Adenylosuccinate synthetase
RMET_RS10505	SM00244	prohibitin homologues
RMET_RS10510	SM00244	prohibitin homologues
RMET_RS10525	SM00382	ATPases associated with a variety of cellular activities
RMET_RS10530	SM00564	beta-propeller repeat
RMET_RS10550	SM00530	Helix-turn-helix XRE-family like proteins 
RMET_RS10555	SM00028	Tetratricopeptide repeats
RMET_RS10565	SM00562	RMET_RS10565
RMET_RS10595	SM00257	Lysin motif
RMET_RS10610	SM00829	Enoylreductase
RMET_RS10620	SM00382	ATPases associated with a variety of cellular activities
RMET_RS10625	SM00062	Bacterial periplasmic substrate-binding proteins
RMET_RS10650	SM00493	RMET_RS10650
RMET_RS10660	SM00382	ATPases associated with a variety of cellular activities
RMET_RS10690	SM00357	Cold shock protein domain
RMET_RS10690	SM00382	ATPases associated with a variety of cellular activities
RMET_RS10690	SM00959	Rho termination factor, N-terminal domain
RMET_RS10760	SM00382	ATPases associated with a variety of cellular activities
RMET_RS10790	SM00849	Metallo-beta-lactamase superfamily
RMET_RS10810	SM00421	helix_turn_helix, Lux Regulon
RMET_RS10810	SM00448	cheY-homologous receiver domain
RMET_RS10815	SM00062	Bacterial periplasmic substrate-binding proteins
RMET_RS10815	SM00387	Histidine kinase-like ATPases
RMET_RS10815	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS10815	SM00448	cheY-homologous receiver domain
RMET_RS10825	SM00530	Helix-turn-helix XRE-family like proteins 
RMET_RS10835	SM00530	Helix-turn-helix XRE-family like proteins 
RMET_RS10845	SM00950	RMET_RS10845
RMET_RS10855	SM00530	Helix-turn-helix XRE-family like proteins 
RMET_RS10905	SM00267	diguanylate cyclase
RMET_RS10920	SM00855	Phosphoglycerate mutase family
RMET_RS10940	SM00387	Histidine kinase-like ATPases
RMET_RS10940	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS10945	SM00448	cheY-homologous receiver domain
RMET_RS10945	SM00862	Transcriptional regulatory protein, C terminal
RMET_RS10955	SM00382	ATPases associated with a variety of cellular activities
RMET_RS10985	SM00382	ATPases associated with a variety of cellular activities
RMET_RS10995	SM01103	RMET_RS10995
RMET_RS11010	SM00851	MGS-like domain
RMET_RS11010	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
RMET_RS11020	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
RMET_RS11050	SM00822	RMET_RS11050
RMET_RS11070	SM00257	Lysin motif
RMET_RS11075	SM00849	Metallo-beta-lactamase superfamily
RMET_RS11090	SM00479	RMET_RS11090
RMET_RS11100	SM00831	Cation transporter/ATPase, N-terminus
RMET_RS11120	SM00450	Rhodanese Homology Domain
RMET_RS11150	SM00382	ATPases associated with a variety of cellular activities
RMET_RS11180	SM00091	PAS domain
RMET_RS11180	SM00267	diguanylate cyclase
RMET_RS11180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RMET_RS11210	SM00382	ATPases associated with a variety of cellular activities
RMET_RS11215	SM00382	ATPases associated with a variety of cellular activities
RMET_RS11220	SM00420	helix_turn_helix, Deoxyribose operon repressor
RMET_RS11220	SM01134	RMET_RS11220
RMET_RS11270	SM00267	diguanylate cyclase
RMET_RS11270	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RMET_RS11280	SM00052	Putative diguanylate phosphodiesterase
RMET_RS11280	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RMET_RS11280	SM00091	PAS domain
RMET_RS11280	SM00267	diguanylate cyclase
RMET_RS11305	SM00028	Tetratricopeptide repeats
RMET_RS11340	SM00331	Sigma factor PP2C-like phosphatases
RMET_RS11355	SM00267	diguanylate cyclase
RMET_RS11425	SM00382	ATPases associated with a variety of cellular activities
RMET_RS11540	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
RMET_RS11540	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
RMET_RS11540	SM00493	RMET_RS11540
RMET_RS11555	SM00422	helix_turn_helix, mercury resistance
RMET_RS11605	SM00422	helix_turn_helix, mercury resistance
RMET_RS11690	SM00487	DEAD-like helicases superfamily
RMET_RS11755	SM00382	ATPases associated with a variety of cellular activities
RMET_RS11855	SM00953	RMET_RS11855
RMET_RS11870	SM00342	helix_turn_helix, arabinose operon control protein
RMET_RS11895	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RMET_RS11900	SM00450	Rhodanese Homology Domain
RMET_RS11905	SM00849	Metallo-beta-lactamase superfamily
RMET_RS11950	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS11955	SM00448	cheY-homologous receiver domain
RMET_RS11955	SM00862	Transcriptional regulatory protein, C terminal
RMET_RS11960	SM00382	ATPases associated with a variety of cellular activities
RMET_RS12060	SM00382	ATPases associated with a variety of cellular activities
RMET_RS12090	SM00465	GIY-YIG type nucleases (URI domain)
RMET_RS12100	SM00841	Elongation factor P, C-terminal
RMET_RS12100	SM01185	RMET_RS12100
RMET_RS12130	SM00358	Double-stranded RNA binding motif
RMET_RS12130	SM00535	Ribonuclease III family
RMET_RS12145	SM00838	Elongation factor G C-terminus
RMET_RS12150	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RMET_RS12170	SM00825	Beta-ketoacyl synthase
RMET_RS12180	SM00822	RMET_RS12180
RMET_RS12185	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
RMET_RS12235	SM00363	S4 RNA-binding domain
RMET_RS12240	SM00316	Ribosomal protein S1-like RNA-binding domain
RMET_RS12245	SM00729	Elongator protein 3, MiaB family, Radical SAM
RMET_RS12255	SM00852	Probable molybdopterin binding domain
RMET_RS12310	SM00342	helix_turn_helix, arabinose operon control protein
RMET_RS12330	SM00382	ATPases associated with a variety of cellular activities
RMET_RS12400	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RMET_RS12405	SM01329	RMET_RS12405
RMET_RS12425	SM00382	ATPases associated with a variety of cellular activities
RMET_RS12430	SM00382	ATPases associated with a variety of cellular activities
RMET_RS12480	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RMET_RS12480	SM00866	RMET_RS12480
RMET_RS12535	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RMET_RS12560	SM00986	Uracil DNA glycosylase superfamily
RMET_RS12560	SM00987	UreE urease accessory protein, C-terminal domain 
RMET_RS12565	SM00387	Histidine kinase-like ATPases
RMET_RS12570	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RMET_RS12580	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
RMET_RS12615	SM00382	ATPases associated with a variety of cellular activities
RMET_RS12630	SM00434	DNA Topoisomerase IV
RMET_RS12640	SM00387	Histidine kinase-like ATPases
RMET_RS12640	SM00433	TopoisomeraseII
RMET_RS12650	SM00382	ATPases associated with a variety of cellular activities
RMET_RS12655	SM00421	helix_turn_helix, Lux Regulon
RMET_RS12665	SM00822	RMET_RS12665
RMET_RS12700	SM00822	RMET_RS12700
RMET_RS12705	SM00421	helix_turn_helix, Lux Regulon
RMET_RS12740	SM00062	Bacterial periplasmic substrate-binding proteins
RMET_RS12795	SM00382	ATPases associated with a variety of cellular activities
RMET_RS12850	SM00857	Resolvase, N terminal domain
RMET_RS12880	SM00331	Sigma factor PP2C-like phosphatases
RMET_RS12880	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
RMET_RS12885	SM00487	DEAD-like helicases superfamily
RMET_RS12885	SM00490	helicase superfamily c-terminal domain
RMET_RS12925	SM00852	Probable molybdopterin binding domain
RMET_RS12935	SM00479	RMET_RS12935
RMET_RS12975	SM00487	DEAD-like helicases superfamily
RMET_RS12975	SM00490	helicase superfamily c-terminal domain
RMET_RS12990	SM00882	Coenzyme A transferase
RMET_RS12995	SM00346	helix_turn_helix isocitrate lyase regulation
RMET_RS13020	SM00420	helix_turn_helix, Deoxyribose operon repressor
RMET_RS13020	SM01134	RMET_RS13020
RMET_RS13055	SM00881	CoA binding domain
RMET_RS13065	SM00346	helix_turn_helix isocitrate lyase regulation
RMET_RS13110	SM00400	zinc finger
RMET_RS13110	SM00493	RMET_RS13110
RMET_RS13110	SM00766	DNA primase DnaG DnaB-binding
RMET_RS13145	SM00861	Transketolase, pyrimidine binding domain
RMET_RS13170	SM00450	Rhodanese Homology Domain
RMET_RS13190	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
RMET_RS13190	SM00474	3'-5' exonuclease
RMET_RS13190	SM00475	5'-3' exonuclease
RMET_RS13190	SM00482	DNA polymerase A domain
RMET_RS13240	SM00248	ankyrin repeats
RMET_RS13305	SM00903	Flavin reductase like domain
RMET_RS13310	SM00344	helix_turn_helix ASNC type
RMET_RS13330	SM00346	helix_turn_helix isocitrate lyase regulation
RMET_RS13360	SM00267	diguanylate cyclase
RMET_RS13365	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RMET_RS13365	SM00091	PAS domain
RMET_RS13375	SM00885	D5 N terminal like
RMET_RS13395	SM00382	ATPases associated with a variety of cellular activities
RMET_RS13610	SM00450	Rhodanese Homology Domain
RMET_RS13740	SM00563	Phosphate acyltransferases
RMET_RS13760	SM00732	Likely ribonuclease with RNase H fold.
RMET_RS13855	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RMET_RS13970	SM00855	Phosphoglycerate mutase family
RMET_RS13990	SM00382	ATPases associated with a variety of cellular activities
RMET_RS14045	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RMET_RS14045	SM00895	RMET_RS14045
RMET_RS14225	SM00382	ATPases associated with a variety of cellular activities
RMET_RS14270	SM00479	RMET_RS14270
RMET_RS14320	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RMET_RS14320	SM00866	RMET_RS14320
RMET_RS14325	SM00382	ATPases associated with a variety of cellular activities
RMET_RS14335	SM00062	Bacterial periplasmic substrate-binding proteins
RMET_RS14355	SM00382	ATPases associated with a variety of cellular activities
RMET_RS14360	SM00382	ATPases associated with a variety of cellular activities
RMET_RS14440	SM00421	helix_turn_helix, Lux Regulon
RMET_RS14440	SM00448	cheY-homologous receiver domain
RMET_RS14445	SM00387	Histidine kinase-like ATPases
RMET_RS14445	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS14445	SM00448	cheY-homologous receiver domain
RMET_RS14450	SM00507	HNH nucleases
RMET_RS14455	SM00904	Riboflavin kinase
RMET_RS14495	SM00382	ATPases associated with a variety of cellular activities
RMET_RS14495	SM01086	C-terminal, D2-small domain, of ClpB protein
RMET_RS14505	SM00357	Cold shock protein domain
RMET_RS14510	SM01329	RMET_RS14510
RMET_RS14575	SM00853	MutL C terminal dimerisation domain
RMET_RS14575	SM01340	RMET_RS14575
RMET_RS14630	SM00382	ATPases associated with a variety of cellular activities
RMET_RS14640	SM00271	DnaJ molecular chaperone homology domain
RMET_RS14715	SM00382	ATPases associated with a variety of cellular activities
RMET_RS14750	SM00487	DEAD-like helicases superfamily
RMET_RS14750	SM00490	helicase superfamily c-terminal domain
RMET_RS14765	SM01323	RMET_RS14765
RMET_RS14785	SM00448	cheY-homologous receiver domain
RMET_RS14790	SM00387	Histidine kinase-like ATPases
RMET_RS14790	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS14790	SM00448	cheY-homologous receiver domain
RMET_RS14795	SM00387	Histidine kinase-like ATPases
RMET_RS14795	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS14805	SM00867	YceI-like domain 
RMET_RS14810	SM00867	YceI-like domain 
RMET_RS14840	SM01130	RMET_RS14840
RMET_RS14855	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
RMET_RS14855	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
RMET_RS14870	SM00448	cheY-homologous receiver domain
RMET_RS14875	SM00981	RMET_RS14875
RMET_RS14930	SM00903	Flavin reductase like domain
RMET_RS14935	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
RMET_RS14940	SM00861	Transketolase, pyrimidine binding domain
RMET_RS15005	SM00062	Bacterial periplasmic substrate-binding proteins
RMET_RS15010	SM00382	ATPases associated with a variety of cellular activities
RMET_RS15035	SM00014	Acid phosphatase homologues
RMET_RS15055	SM00448	cheY-homologous receiver domain
RMET_RS15055	SM00862	Transcriptional regulatory protein, C terminal
RMET_RS15060	SM00387	Histidine kinase-like ATPases
RMET_RS15060	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS15070	SM00857	Resolvase, N terminal domain
RMET_RS15110	SM00387	Histidine kinase-like ATPases
RMET_RS15110	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS15115	SM00448	cheY-homologous receiver domain
RMET_RS15115	SM00862	Transcriptional regulatory protein, C terminal
RMET_RS15195	SM00470	ParB-like nuclease domain
RMET_RS15265	SM00919	Malic enzyme, NAD binding domain
RMET_RS15265	SM01274	RMET_RS15265
RMET_RS15285	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
RMET_RS15315	SM00955	RMET_RS15315
RMET_RS15320	SM00822	RMET_RS15320
RMET_RS15360	SM00878	Biotin carboxylase C-terminal domain
RMET_RS15410	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
RMET_RS15445	SM00829	Enoylreductase
RMET_RS15465	SM00644	RMET_RS15465
RMET_RS15470	SM00382	ATPases associated with a variety of cellular activities
RMET_RS15470	SM00448	cheY-homologous receiver domain
RMET_RS15475	SM00387	Histidine kinase-like ATPases
RMET_RS15475	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS15490	SM00382	ATPases associated with a variety of cellular activities
RMET_RS15490	SM00962	SRP54-type protein, GTPase domain
RMET_RS15490	SM00963	SRP54-type protein, helical bundle domain
RMET_RS15510	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
RMET_RS15535	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
RMET_RS15605	SM00382	ATPases associated with a variety of cellular activities
RMET_RS15615	SM00957	SecA DEAD-like domain
RMET_RS15615	SM00958	SecA preprotein cross-linking domain
RMET_RS15640	SM00864	Tubulin/FtsZ family, GTPase domain
RMET_RS15640	SM00865	Tubulin/FtsZ family, C-terminal domain
RMET_RS15645	SM00842	Cell division protein FtsA
RMET_RS15730	SM00382	ATPases associated with a variety of cellular activities
RMET_RS15755	SM00347	helix_turn_helix multiple antibiotic resistance protein
RMET_RS15780	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RMET_RS15790	SM00382	ATPases associated with a variety of cellular activities
RMET_RS15795	SM00382	ATPases associated with a variety of cellular activities
RMET_RS15875	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RMET_RS15875	SM00382	ATPases associated with a variety of cellular activities
RMET_RS15895	SM00729	Elongator protein 3, MiaB family, Radical SAM
RMET_RS15910	SM00925	MltA specific insert domain
RMET_RS15955	SM01118	RMET_RS15955
RMET_RS15960	SM00986	Uracil DNA glycosylase superfamily
RMET_RS15960	SM00987	UreE urease accessory protein, C-terminal domain 
RMET_RS15975	SM00382	ATPases associated with a variety of cellular activities
RMET_RS15985	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RMET_RS15990	SM00829	Enoylreductase
RMET_RS16050	SM00937	RMET_RS16050
RMET_RS16090	SM00344	helix_turn_helix ASNC type
RMET_RS16150	SM00382	ATPases associated with a variety of cellular activities
RMET_RS16170	SM00267	diguanylate cyclase
RMET_RS16215	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RMET_RS16315	SM00382	ATPases associated with a variety of cellular activities
RMET_RS16345	SM00382	ATPases associated with a variety of cellular activities
RMET_RS16370	SM01321	RMET_RS16370
RMET_RS16375	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RMET_RS16390	SM00965	Secretin and TonB N terminus short domain
RMET_RS16410	SM00842	Cell division protein FtsA
RMET_RS16420	SM01219	RMET_RS16420
RMET_RS16480	SM01004	Delta-aminolevulinic acid dehydratase
RMET_RS16505	SM00662	RNA polymerases D
RMET_RS16510	SM00363	S4 RNA-binding domain
RMET_RS16510	SM01390	RMET_RS16510
RMET_RS16530	SM00316	Ribosomal protein S1-like RNA-binding domain
RMET_RS16580	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
RMET_RS16585	SM01374	RMET_RS16585
RMET_RS16605	SM00322	K homology RNA-binding domain
RMET_RS16620	SM01382	RMET_RS16620
RMET_RS16620	SM01383	RMET_RS16620
RMET_RS16640	SM00903	Flavin reductase like domain
RMET_RS16660	SM00342	helix_turn_helix, arabinose operon control protein
RMET_RS16665	SM01403	RMET_RS16665
RMET_RS16675	SM00838	Elongation factor G C-terminus
RMET_RS16675	SM00889	Elongation factor G, domain IV
RMET_RS16690	SM00341	Helicase and RNase D C-terminal
RMET_RS16690	SM00487	DEAD-like helicases superfamily
RMET_RS16690	SM00490	helicase superfamily c-terminal domain
RMET_RS16690	SM00956	RMET_RS16690
RMET_RS16695	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RMET_RS16715	SM00663	RNA polymerase I subunit A N-terminus
RMET_RS16740	SM00649	Ribosomal protein L11/L12
RMET_RS16745	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
RMET_RS16745	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
RMET_RS16905	SM00382	ATPases associated with a variety of cellular activities
RMET_RS16975	SM00344	helix_turn_helix ASNC type
RMET_RS16980	SM00054	EF-hand, calcium binding motif
RMET_RS17045	SM00382	ATPases associated with a variety of cellular activities
RMET_RS17120	SM00729	Elongator protein 3, MiaB family, Radical SAM
RMET_RS17225	SM00749	bacterial OsmY and nodulation domain
RMET_RS17250	SM00849	Metallo-beta-lactamase superfamily
RMET_RS17290	SM00347	helix_turn_helix multiple antibiotic resistance protein
RMET_RS17310	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RMET_RS17310	SM00895	RMET_RS17310
RMET_RS17365	SM00422	helix_turn_helix, mercury resistance
RMET_RS17410	SM00342	helix_turn_helix, arabinose operon control protein
RMET_RS17460	SM00729	Elongator protein 3, MiaB family, Radical SAM
RMET_RS17470	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RMET_RS17470	SM00387	Histidine kinase-like ATPases
RMET_RS17470	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS17475	SM00448	cheY-homologous receiver domain
RMET_RS17475	SM00862	Transcriptional regulatory protein, C terminal
RMET_RS17510	SM00849	Metallo-beta-lactamase superfamily
RMET_RS17525	SM00028	Tetratricopeptide repeats
RMET_RS17540	SM00487	DEAD-like helicases superfamily
RMET_RS17540	SM00490	helicase superfamily c-terminal domain
RMET_RS17560	SM00382	ATPases associated with a variety of cellular activities
RMET_RS17600	SM00470	ParB-like nuclease domain
RMET_RS17615	SM01228	RMET_RS17615
RMET_RS17635	SM00382	ATPases associated with a variety of cellular activities
RMET_RS17640	SM00382	ATPases associated with a variety of cellular activities
RMET_RS17680	SM00382	ATPases associated with a variety of cellular activities
RMET_RS17685	SM00382	ATPases associated with a variety of cellular activities
RMET_RS17700	SM00422	helix_turn_helix, mercury resistance
RMET_RS17740	SM01359	RMET_RS17740
RMET_RS17740	SM01360	RMET_RS17740
RMET_RS17745	SM00344	helix_turn_helix ASNC type
RMET_RS17760	SM00448	cheY-homologous receiver domain
RMET_RS17760	SM00862	Transcriptional regulatory protein, C terminal
RMET_RS17765	SM00387	Histidine kinase-like ATPases
RMET_RS17765	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS17770	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
RMET_RS17775	SM00411	bacterial (prokaryotic) histone like domain
RMET_RS17815	SM00267	diguanylate cyclase
RMET_RS17880	SM00448	cheY-homologous receiver domain
RMET_RS17885	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RMET_RS17885	SM00387	Histidine kinase-like ATPases
RMET_RS17885	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS17915	SM00257	Lysin motif
RMET_RS17930	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
RMET_RS17930	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
RMET_RS17930	SM00493	RMET_RS17930
RMET_RS17960	SM00387	Histidine kinase-like ATPases
RMET_RS17960	SM01049	RMET_RS17960
RMET_RS17965	SM00421	helix_turn_helix, Lux Regulon
RMET_RS17965	SM00448	cheY-homologous receiver domain
RMET_RS18005	SM00387	Histidine kinase-like ATPases
RMET_RS18005	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS18010	SM00448	cheY-homologous receiver domain
RMET_RS18010	SM00862	Transcriptional regulatory protein, C terminal
RMET_RS18080	SM00822	RMET_RS18080
RMET_RS18095	SM00422	helix_turn_helix, mercury resistance
RMET_RS18140	SM00880	RMET_RS18140
RMET_RS18450	SM00729	Elongator protein 3, MiaB family, Radical SAM
RMET_RS18950	SM00996	S-adenosyl-L-homocysteine hydrolase
RMET_RS18950	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
RMET_RS21065	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
RMET_RS21160	SM01209	RMET_RS21160
RMET_RS21510	SM00387	Histidine kinase-like ATPases
RMET_RS21720	SM00434	DNA Topoisomerase IV
RMET_RS22155	SM00867	YceI-like domain 
RMET_RS23225	SM00226	Low molecular weight phosphatase family
RMET_RS24060	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RMET_RS24125	SM00382	ATPases associated with a variety of cellular activities
RMET_RS25055	SM00532	Ligase N family
RMET_RS25955	SM00388	His Kinase A (phosphoacceptor) domain
RMET_RS26470	SM00878	Biotin carboxylase C-terminal domain
RMET_RS27610	SM00487	DEAD-like helicases superfamily
RMET_RS27635	SM00382	ATPases associated with a variety of cellular activities
RMET_RS28515	SM00382	ATPases associated with a variety of cellular activities
RMET_RS29030	SM00267	diguanylate cyclase
RMET_RS29500	SM00487	DEAD-like helicases superfamily
RMET_RS31360	SM01018	B12 binding domain
RMET_RS31510	SM00833	Cobalamin synthesis protein cobW C-terminal domain
